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Sample records for lynx lynx canadensis

  1. Landscape connectivity for bobcat (Lynx rufus) and lynx (Lynx canadensis) in the Northeastern United States

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    Farrell, Laura E.; Levy, Daniel M.; Donovan, Therese M.; Mickey, Ruth M.; Howard, Alan; Vashon, Jennifer; Freeman, Mark; Royar, Kim; Kilpatrick, C. William

    2018-01-01

    Landscape connectivity is integral to the persistence of metapopulations of wide ranging carnivores and other terrestrial species. The objectives of this research were to investigate the landscape characteristics essential to use of areas by lynx and bobcats in northern New England, map a habitat availability model for each species, and explore connectivity across areas of the region likely to experience future development pressure. A Mahalanobis distance analysis was conducted on location data collected between 2005 and 2010 from 16 bobcats in western Vermont and 31 lynx in northern Maine to determine which variables were most consistent across all locations for each species using three scales based on average 1) local (15 minute) movement, 2) linear distance between daily locations, and 3) female home range size. The bobcat model providing the widest separation between used locations and random study area locations suggests that they cue into landscape features such as edge, availability of cover, and development density at different scales. The lynx model with the widest separation between random and used locations contained five variables including natural habitat, cover, and elevation—all at different scales. Shrub scrub habitat—where lynx’s preferred prey is most abundant—was represented at the daily distance moved scale. Cross validation indicated that outliers had little effect on models for either species. A habitat suitability value was calculated for each 30 m2 pixel across Vermont, New Hampshire, and Maine for each species and used to map connectivity between conserved lands within selected areas across the region. Projections of future landscape change illustrated potential impacts of anthropogenic development on areas lynx and bobcat may use, and indicated where connectivity for bobcats and lynx may be lost. These projections provided a guide for conservation of landscape permeability for lynx, bobcat, and species relying on similar habitats

  2. Assessment of a recombinant F1-V fusion protein vaccine intended to protect Canada lynx (Lynx canadensis) from plague

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    Wolfe, Lisa L.; Shenk, Tanya M.; Powell, Bradford; Rocke, Tonie E.

    2011-01-01

    As part of an ongoing restoration program in Colorado, USA, we evaluated adverse reactions and seroconversion in captive Canada lynx (Lynx canadensis) after vaccination with a recombinant F1-V fusion protein vaccine against Yersinia pestis, the bacterium that causes plague. Ten adult female lynx received the F1-V vaccine; 10 source- and age-matched lynx remained unvaccinated as controls. All of the vaccinated and control lynx remained apparently healthy throughout the confinement period. We observed no evidence of injection site or systemic reactions to the F1-V vaccine. Among vaccinated lynx, differences in log10 reciprocal antibody titers measured in sera collected before and after vaccination (two doses) ranged from 1.2 to 5.2 for anti-F1 antibodies and from 0.6 to 5.2 for anti-V antibodies; titers in unvaccinated lynx did not change appreciably over the course of confinement prior to release, and thus differences in anti-F1 (P=0.003) and anti-V (P=0.0005) titers were greater among vaccinated lynx than among controls. Although our findings suggest that the F1-V fusion protein vaccine evaluated here is likely to stimulate antibody responses that may help protect Canada lynx from plague, we observed no apparent differences in survival between vaccinated and unvaccinated subject animals. Retrospectively, 22 of 50 (44%; 95% confidence interval 29–59%) unvaccinated lynx captured or recaptured in Colorado during 2000–08 had passive hemagglutination antibody titers >1:16, consistent with exposure to Y. pestis; paired pre- and postrelease titers available for eight of these animals showed titer increases similar in magnitude to those seen in response to vaccination, suggesting at least some lynx may naturally acquire immunity to plague in Colorado habitats.

  3. Patterns of ovarian and luteal activity in captive and wild Canada lynx (Lynx canadensis)

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    Kerry V. Fanson; Nadja C. Wielebnowski; Tanya M. Shenk; Jennifer H. Vashon; John R. Squires; Jeffrey R. Lucas

    2010-01-01

    Canada lynx face some unique breeding restrictions, which may have implications for population viability and captive management. The goal of this study was to improve our understanding of basic reproductive physiology in Canada lynx. Using fecal hormone metabolite analysis, we established normative patterns of fecal estrogen (fE) and progestagen (fP)...

  4. Patterns of testicular activity in captive and wild Canada lynx (Lynx canadensis)

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    Kerry Fanson; Nadja C. Wielebnowski; Tanya M. Shenk; Walter J. Jakubas; John R. Squires; Jeffrey R. Lucas

    2010-01-01

    Canada lynx are listed as a threatened species in the contiguous US. Understanding the reproductive characteristics (i.e., mating system, behavior, physiology) of a species is useful for ensuring effective in situ and ex situ management plans. The goal of this study was to describe patterns of androgen expression in both captive and wild male Canada lynx using...

  5. Relative accuracy of spatial predictive models for lynx Lynx canadensis derived using logistic regression-AIC, multiple criteria evaluation and Bayesian approaches

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    Shelley M. ALEXANDER

    2009-02-01

    Full Text Available We compared probability surfaces derived using one set of environmental variables in three Geographic Information Systems (GIS-based approaches: logistic regression and Akaike’s Information Criterion (AIC, Multiple Criteria Evaluation (MCE, and Bayesian Analysis (specifically Dempster-Shafer theory. We used lynx Lynx canadensis as our focal species, and developed our environment relationship model using track data collected in Banff National Park, Alberta, Canada, during winters from 1997 to 2000. The accuracy of the three spatial models were compared using a contingency table method. We determined the percentage of cases in which both presence and absence points were correctly classified (overall accuracy, the failure to predict a species where it occurred (omission error and the prediction of presence where there was absence (commission error. Our overall accuracy showed the logistic regression approach was the most accurate (74.51%. The multiple criteria evaluation was intermediate (39.22%, while the Dempster-Shafer (D-S theory model was the poorest (29.90%. However, omission and commission error tell us a different story: logistic regression had the lowest commission error, while D-S theory produced the lowest omission error. Our results provide evidence that habitat modellers should evaluate all three error measures when ascribing confidence in their model. We suggest that for our study area at least, the logistic regression model is optimal. However, where sample size is small or the species is very rare, it may also be useful to explore and/or use a more ecologically cautious modelling approach (e.g. Dempster-Shafer that would over-predict, protect more sites, and thereby minimize the risk of missing critical habitat in conservation plans[Current Zoology 55(1: 28 – 40, 2009].

  6. New evidence for the occurrence of Eurasian lynx (Lynx lynx) in medieval Britain

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    Hetherington, David A.; Lord, Tom C.; Jacobi, Roger M.

    2006-01-01

    The presence of Eurasian lynx as a former native species in Britain during the Holocene is known from bones recovered from several sites. AMS radiocarbon dating of lynx bone recovered from two sites in the Craven area of northern England gave 1842 +/- 35 14C yr BP and 1550 +/- 24 14C yr BP, together representing the youngest dates for lynx from England, and in the case of the latter, the youngest for Britain as a whole. These dates support the view that the game animal whose occurrence in the nearby Lake District is described in the early 7th century Cumbric text Pais Dinogad, and whose translation to date has been problematic, is a lynx. The occurrence of lynx in early medieval Britain shows that earlier periods of climate change, previously blamed for the species' extinction in Britain, were not responsible. Instead, anthropogenic factors such as severe deforestation, declining deer populations, and persecution, are likely to have caused the extirpation of lynx in Britain. Consequently, the lynx qualifies as a candidate for reintroduction. Large-scale reafforestation, the growth of deer populations, and more positive attitudes towards carnivores in modern society, could permit the restoration of lynx to Britain, particularly in Scotland.

  7. Musculoskeletal anatomy of the Eurasian lynx, Lynx lynx (Carnivora: Felidae) forelimb: Adaptations to capture large prey?

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    Viranta, Suvi; Lommi, Hanna; Holmala, Katja; Laakkonen, Juha

    2016-06-01

    Mammalian carnivores adhere to two different feeding strategies relative to their body masses. Large carnivores prey on animals that are the same size or larger than themselves, whereas small carnivores prey on smaller vertebrates and invertebrates. The Eurasian lynx (Lynx lynx) falls in between these two categories. Lynx descend from larger forms that were probably large prey specialists, but during the Pleistocene became predators of small prey. The modern Eurasian lynx may be an evolutionary reversal toward specializing in large prey again. We hypothesized that the musculoskeletal anatomy of lynx should show traits for catching large prey. To test our hypothesis, we dissected the forelimb muscles of six Eurasian lynx individuals and compared our findings to results published for other felids. We measured the bones and compared their dimensions to the published material. Our material displayed a well-developed pectoral girdle musculature with some uniquely extensive muscle attachments. The upper arm musculature resembled that of the pantherine felids and probably the extinct sabertooths, and also the muscles responsible for supination and pronation were similar to those in large cats. The muscles controlling the pollex were well-developed. However, skeletal indices were similar to those of small prey predators. Our findings show that lynx possess the topographic pattern of muscle origin and insertion like in large felids. J. Morphol. 277:753-765, 2016. © 2016 Wiley Periodicals, Inc. © 2016 Wiley Periodicals, Inc.

  8. Missing lynx and trophic cascades in food webs: A reply to Ripple et al.

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    John R. Squires; Nicholas J. DeCesare; Mark Hebblewhite; Joel Berger

    2012-01-01

    Ripple et al. (2011) proposed a hypothesis that the recovery of gray wolves (Canis lupus) may positively affect the viability of threatened Canada lynx (Lynx canadensis) populations in the contiguous United States through indirect species interactions. Ripple et al. (2011) proposed 2 key trophic linkages connecting wolf restoration with lynx recovery. First, recovering...

  9. Molecular identification of Taenia spp. in the Eurasian lynx (Lynx lynx) from Finland.

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    Lavikainen, A; Haukisalmi, V; Deksne, G; Holmala, K; Lejeune, M; Isomursu, M; Jokelainen, P; Näreaho, A; Laakkonen, J; Hoberg, E P; Sukura, A

    2013-04-01

    Cestodes of the genus Taenia are parasites of mammals, with mainly carnivores as definitive and herbivores as intermediate hosts. Various medium-sized cats, Lynx spp., are involved in the life cycles of several species of Taenia. The aim of the present study was to identify Taenia tapeworms in the Eurasian lynx (Lynx lynx) from Finland. In total, 135 tapeworms from 72 lynx were subjected to molecular identification based on sequences of 2 mtDNA regions, the cytochrome c oxidase subunit 1 and the NADH dehydrogenase subunit 1 genes. Available morphological characters of the rostellar hooks and strobila were compared. Two species of Taenia were found: T. laticollis (127 samples) and an unknown Taenia sp. (5 samples). The latter could not be identified to species based on mtDNA, and the rostellar hooks were short relative to those described among other Taenia spp. recorded in felids from the Holarctic region. In the phylogenetic analyses of mtDNA sequences, T. laticollis was placed as a sister species of T. macrocystis, and the unknown Taenia sp. was closely related to T. hydatigena and T. regis. Our analyses suggest that these distinct taeniid tapeworms represent a putative new species of Taenia. The only currently recognized definitive host is L. lynx and the intermediate host is unknown.

  10. Collection of field reproductive data from carcasses of the female Eurasian lynx (Lynx lynx).

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    Axnér, E; Payan-Carreira, R; Setterlind, P; Åsbrink, J; Söderberg, A

    2013-11-01

    Information about reproductive physiology in the Eurasian lynx (Lynx lynx) would generate knowledge that could be useful in the management of the Swedish lynx population based on the knowledge about their reproductive potential and population development. Age-related differences in ovulation and implantation rates would affect the reproductive output and the development of the population. The aims of this study were to evaluate a protocol for collection of reproductive data from carcasses by comparisons with published field data and to generate data about reproduction in the Swedish lynx. Reproductive organs from 120 females that were harvested between March 1 and April 9 from 2009 to 2011 were collected and evaluated macroscopically for placental scars. Females had their first estrus as yearlings but did not have their first litter until the next season. Pregnancy rates were lower in 2-year-old females than in females aged 3 to 7 years but did not differ significantly from females aged 8 to 13 years (54.5%, 95.6%, and 75.0%, respectively). CL from the present season were morphologically distinctly different from luteal bodies from previous cycles (LBPC). All females ≥3 years had macroscopically visible LBPC, whereas only 67% of 22 to 23 months old females had one to three LBPC and no females number of LBPC counted in females ≥3 years of age was 11. These data would be in agreement with only one estrus per season and LBPC from at least three previous reproductive seasons in older females. The number of LBPC was significantly correlated with the weight of the ovaries rs = 0.648, P reproductive cycle and was highest for mature females in the luteal phase of the cycle. The estrous period, defined as occurrence of ovarian follicles lasted from March 5 to April 1 in this material. In conclusion, this study confirms that useful information about lynx reproduction can be collected from reproductive organs retrieved after the death of the animals. Continuous monitoring

  11. Foraging sites of Eurasian lynx Lynx lynx: relative importance of microhabitat and prey occurrence

    Czech Academy of Sciences Publication Activity Database

    Belotti, E.; Červený, J.; Šustr, Pavel; Kreisinger, Jakub; Gaibani, G.; Bufka, L.

    2013-01-01

    Roč. 19, č. 2 (2013), s. 188-201 ISSN 0909-6396 R&D Projects: GA MŠk(CZ) ED1.1.00/02.0073 Institutional support: RVO:68081766 ; RVO:67179843 Keywords : Eurasian Lynx * microhabitat * red deer * roe deer * stalking cover * predation Subject RIV: EH - Ecology, Behaviour Impact factor: 1.071, year: 2013

  12. Polonium-210 and Caesium-137 in lynx (Lynx lynx), wolverine (Gulo gulo) and wolves (Canis lupus)

    International Nuclear Information System (INIS)

    Gjelsvik, Runhild; Holm, Elis; Kålås, John Atle; Persson, Bertil; Åsbrink, Jessica

    2014-01-01

    Wolves, lynx and wolverines are on the top of the food-chain in northern Scandinavia and Finland. 210 Po and 137 Cs have been analysed in samples of liver, kidney and muscle from 28 wolves from Sweden. In addition blood samples were taken from 27 wolves. In 9 of the wolves, samples of muscle, liver and blood were analysed for 210 Po. Samples of liver and muscle were collected from 16 lynx and 16 wolverines from Norway. The liver samples were analysed for 210 Po and 137 Cs. Only 137 Cs analyses were carried out for the muscle samples. The wolves were collected during the winter 2010 and 2011, while the samples for lynx and wolverines were all from 2011. The activity concentrations of 210 Po in wolves were higher for liver (range 20–523 Bq kg −1 d.w.) and kidney (range 24–942 Bq kg −1 d.w.) than muscle (range 1–43 Bq kg −1 d.w.) and blood (range 2–54 Bq kg −1 d.w.). Activity ratios, 210 Po/ 210 Pb, in wolf samples of muscle, liver and blood were in the ranges 2–77, 9–56 and 2–54. Using a wet weight ratio of 3.8 the maximal absorbed dose from 210 Po to wolf liver was estimated to 3500 μGy per year. Compared to wolf, the ranges of 210 Po in liver samples were lower in lynx (range 22–211 Bq kg −1 d.w.) and wolverine (range16–160 Bq kg −1 d.w.). Concentration of 137 Cs in wolf samples of muscle, liver, kidney and blood were in the ranges 70–8410 Bq kg −1 d.w., 36–4050 Bq kg −1 d.w., 31–3453 Bq kg −1 d.w. and 4–959 Bq kg −1 d.w., respectively. 137 Cs in lynx muscle and liver samples were in the ranges 44–13393 Bq kg −1 d.w. and 125–10260 Bq kg −1 d.w. The corresponding values for 137 Cs in wolverine were 22–3405 Bq kg −1 d.w. for liver and 53–4780 Bq kg −1 d.w. for muscle. The maximal absorbed dose from 137 Cs to lynx was estimated to 3000 μGy per year. - Highlights: • Annual doses from 210 Po are 1.4, 1.0 and 3.4 mGy for lynx, wolverine, and wolf. • Annual doses from 137 Cs are 3.3, 1.5 and 3.6 mGy for

  13. Habitat selection by Eurasian lynx (Lynx lynx) is primarily driven by avoidance of human activity during day and prey availability during night.

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    Filla, Marc; Premier, Joseph; Magg, Nora; Dupke, Claudia; Khorozyan, Igor; Waltert, Matthias; Bufka, Luděk; Heurich, Marco

    2017-08-01

    The greatest threat to the protected Eurasian lynx ( Lynx lynx ) in Central Europe is human-induced mortality. As the availability of lynx prey often peaks in human-modified areas, lynx have to balance successful prey hunting with the risk of encounters with humans. We hypothesized that lynx minimize this risk by adjusting habitat choices to the phases of the day and over seasons. We predicted that (1) due to avoidance of human-dominated areas during daytime, lynx range use is higher at nighttime, that (2) prey availability drives lynx habitat selection at night, whereas high cover, terrain inaccessibility, and distance to human infrastructure drive habitat selection during the day, and that (3) habitat selection also differs between seasons, with altitude being a dominant factor in winter. To test these hypotheses, we analyzed telemetry data (GPS, VHF) of 10 lynx in the Bohemian Forest Ecosystem (Germany, Czech Republic) between 2005 and 2013 using generalized additive mixed models and considering various predictor variables. Night ranges exceeded day ranges by more than 10%. At night, lynx selected open habitats, such as meadows, which are associated with high ungulate abundance. By contrast, during the day, lynx selected habitats offering dense understorey cover and rugged terrain away from human infrastructure. In summer, land-cover type greatly shaped lynx habitats, whereas in winter, lynx selected lower altitudes. We concluded that open habitats need to be considered for more realistic habitat models and contribute to future management and conservation (habitat suitability, carrying capacity) of Eurasian lynx in Central Europe.

  14. Polonium-210 and Caesium-137 in lynx (Lynx lynx), wolverine (Gulo gulo) and wolves (Canis lupus).

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    Gjelsvik, Runhild; Holm, Elis; Kålås, John Atle; Persson, Bertil; Asbrink, Jessica

    2014-12-01

    Wolves, lynx and wolverines are on the top of the food-chain in northern Scandinavia and Finland. (210)Po and (137)Cs have been analysed in samples of liver, kidney and muscle from 28 wolves from Sweden. In addition blood samples were taken from 27 wolves. In 9 of the wolves, samples of muscle, liver and blood were analysed for (210)Po. Samples of liver and muscle were collected from 16 lynx and 16 wolverines from Norway. The liver samples were analysed for (210)Po and (137)Cs. Only (137)Cs analyses were carried out for the muscle samples. The wolves were collected during the winter 2010 and 2011, while the samples for lynx and wolverines were all from 2011. The activity concentrations of (210)Po in wolves were higher for liver (range 20-523 Bq kg(-1) d.w.) and kidney (range 24-942 Bq kg(-1) d.w.) than muscle (range 1-43 Bq kg(-1) d.w.) and blood (range 2-54 Bq kg(-1) d.w.). Activity ratios, (210)Po/(210)Pb, in wolf samples of muscle, liver and blood were in the ranges 2-77, 9-56 and 2-54. Using a wet weight ratio of 3.8 the maximal absorbed dose from (210)Po to wolf liver was estimated to 3500 μGy per year. Compared to wolf, the ranges of (210)Po in liver samples were lower in lynx (range 22-211 Bq kg(-1) d.w.) and wolverine (range16-160 Bq kg(-1) d.w.). Concentration of (137)Cs in wolf samples of muscle, liver, kidney and blood were in the ranges 70-8410 Bq kg(-1) d.w., 36-4050 Bq kg(-1) d.w., 31-3453 Bq kg(-1) d.w. and 4-959 Bq kg(-1) d.w., respectively. (137)Cs in lynx muscle and liver samples were in the ranges 44-13393 Bq kg(-1) d.w. and 125-10260 Bq kg(-1) d.w. The corresponding values for (137)Cs in wolverine were 22-3405 Bq kg(-1) d.w. for liver and 53-4780 Bq kg(-1) d.w. for muscle. The maximal absorbed dose from (137)Cs to lynx was estimated to 3000 μGy per year. Copyright © 2014 Elsevier Ltd. All rights reserved.

  15. Macroscopic and microscopic evaluation of Eurasian lynx (Lynx lynx) female tubular reproductive organs in relation to ovarian structures.

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    Axnér, E; Holm, D; Gavier-Widén, D; Söderberg, A; Bergqvist, A S

    2015-09-15

    Although monitoring wild animals in the field is essential for estimations of population size and development, there are pitfalls associated with field monitoring. In addition, some detailed data about reproductive physiology can be difficult to obtain in wild live animals. Studying reproductive organs from the Eurasian lynx killed at hunting or found dead could be used as a valuable addition to other field data. We evaluated reproductive organs from 39 Eurasian lynx females (Lynx lynx) killed in Sweden during the hunting seasons in 2009, 2010, and 2011. According to notes on ovarian structures, the animals were categorized as being in one of four different reproductive stages: juvenile (n = 10), follicular stage (n = 8), luteal stage (n = 11), and anestrus (n = 10). Corpora lutea were classified as fresh CL from the present season or as luteal bodies from previous cycles. Microscopic evaluations were blindly coded while the outer measurements of the vagina and uterus were taken at the time of organ retrieval. The width of the endometrium, myometrium, outer width of the uterine horns, and the diameter of the vagina differed significantly with the reproductive stage (P number of endometrial glands evaluated blindly coded on a subjective scale was significantly associated with the reproductive stage (P reproductive stages (P reproductive stage when evaluating reproductive organs in the Eurasian lynx killed during the hunting season. Routine evaluation of reproductive organs has a potential to be a useful additional tool to field studies of live lynx to monitor their reproduction. Copyright © 2015 Elsevier Inc. All rights reserved.

  16. LEGAL STATUS AND MANAGEMENT OF THE DINARIC LYNX POPULATION

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    Magda Sindičić

    2013-09-01

    Full Text Available Reintroduction of the Eurasian lynx (Lynx lynx to the Dinaric Mountains in 1973 is one of the rare examples of successful reintroduction of a large predator. Today, Dinaric lynx population includes all lynx in Slovenia south of highway Ljubljana – Trieste, lynx in Croatia as well as lynx in western Bosnia and Herzegovina. It is considered that the population consists of mostly 130 individuals. Being small and endangered, the most important threats for its survival are poaching, depletion of prey, and possible consequences of reduced genetic diversity. In Slovenia, Croatia and the Federation of Bosnia and Herzegovina, the lynx is a protected species, while the current legislation of the Republic of Srpska does not refer to the lynx at all. Slovenia and Croatia have coordinated their monitoring and management activities, while no organized monitoring system is present in Bosnia and Herzegovina. The goal is to establish bilateral cooperation between Croatia and Slovenia as a basis for the management of the entire lynx population in this part of Europe, including primarily Bosnia and Herzegovina but also Austria and Italy.Key words: Eurasian lynx, Lynx lynx, Dinaric population, legal status, management

  17. Ancient DNA reveals past existence of Eurasian lynx in Spain

    DEFF Research Database (Denmark)

    Rodríguez-Varela, R.; García, N.; Nores, C.

    2016-01-01

    . The paleontological record and our data indicate a population replacement of the Iberian lynx by the Eurasian lynx during the Pleistocene/Holocene transition in the Cantabrian cornice of Spain. Phylogeographic patterns of Late Pleistocene and Holocene Eurasian lynx from Iberia, France, Italy and Denmark show...

  18. Radicaesium 210Po and 210Pb in wolves (Canis lupus), Lynx (Lynx lynx) and wolverine (Gulo gulo)

    International Nuclear Information System (INIS)

    Holm, E.; Gjeisvik, R.; Kålås, J.A.; Persson, B.; Henricsson, F.; Samuelsson, C.; Åsbrink, J.

    2013-01-01

    Wolves, lynx and wolverines are on the top of the food-chain in northern Scandinavia and Finland and also several other countries. Concentrations of 210 Po, 210 Pb and 137 Cs have been analysed in muscle, liver and kidney samples of 28 wolves from Sweden and liver from 16 lynx and 16 wolverines from Norway collected during the years 2010 and 2011. For example the activity concentrations of 210 Po in liver from wolf, lynx, wolverine and wolf varied from 20-500, 22-211 Bq kg -1 , and 17-160 Bq kg - respectively. Using a wet weight ratio of 3.8 the maximal dose to liver of wolves is estimated to 3.5 mGy per year. Polonium-210 is accumulated to a large extent than it precursor 210 Pb. Activity ratios, 210 Po/ 210 Pb, in liver for example ranged from 9 to 56. Radiocaesium in liver shows for example a very larger variation ranging from 40-13000 Bq kg -1 in lynx. This is mainly due to the large variability in deposition from the Chernobyl accident. For wolves the 137 Cs concentration in muscle varied from 70 to 8000 Bq kg -1 d.w. The maximal dose to muscle for wolves from 137 Cs is estimated to 3.6 mGy per year. Wolves, lynx and wolverines are on the top of the food-chain in northern Scandinavia and Finland and also several other countries. Concentrations of 210 Po, 210 Pb and 137 Cs have been analysed in liver samples of 28 wolves from Sweden and 16 lynx and 16 wolverines from Norway collected during the years 2010 and 2011. The activity concentrations of 210 Po in liver from lynx, wolverine and wolf varied from 22- 211 Bq kg -1 , 17-160 Bq kg -1 d.w. and 20-523 Bq kg -1 d.w., respectively and did not differ between species. Using a wet weight ratio of 3.8 the maximal dose to liver is estimated to 3.5 mGy per year. Polonium-210 is accumulated to a larger extent than it precursor 210 Pb. Activity ratios, 210 Po/ 210 Pb, in liver for example ranged from 9 to 56. Radiocaesium in liver show a very larger variation ranging from 20-13000 Bq kg in lynx. This is mainly due to

  19. Diet and Predatory Behavior of Lynx in Sweden

    DEFF Research Database (Denmark)

    Moshøj, Charlotte Margaret

    2002-01-01

    and hunters who fear predation on livestock and reindeer as well as a general reduction in wild game abundance, especially roe deer (Capreolus capreolus). Prey spectrum and predation of lynx was studied based on stomach analyses of lynx throughout Sweden and on data from a field study in south-central Sweden...... (reindeer and roe deer) comprised the greatest part of the diet, while a regional division indicated that while lynxes from northern regions had a narrower diet niche, they were in better condition than lynxes from south of the reindeer husbandry districts. Lynx gender and status also influenced diet...

  20. Status and distribution of the lynx in the German Alps

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    Petra Kaczensky

    1998-09-01

    Full Text Available Abstract The lynx (Lynx lynx had been eradicated in the German Alps by the middle of the 19th century. Since the early 1970s there have been several attempts to initiate the re-introduction of lynx into the German Alps, but none of the projects could be carried out because of the still very controversial attitudes towards the species, and because of competition between institutions. Natural re-colonization of the German Alps by lynx can be expected sooner or later from Switzerland or Austria. Although lynx are already present in some parts of Germany outside the Alps, neither an organized monitoring system nor compensation regulations for losses of livestock exist. For a successful comeback of lynx into Germany, including the German Alps, more efforts than a year-round protection by the federal hunting law is needed. Initiative management actions and intensive public education are necessary to obtain and secure public acceptance of the lynx.

  1. The missing lynx of Eurasia at its Southern edge: a connection to the critically endangered Balkan lynx.

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    Cömert, Numan; Carlı, Oya; Dinçtürk, H Benan

    2018-03-08

    The populations of Eurasian lynx in Anatolia are as fragmented as the European populations. Although the origins of and the connections between the European lynx populations have been elucidated, there have been no genetic studies on the lynx populations in Turkey. The lack of genetic and evolutionary information about lynx in Anatolia, which is considered to be a biodiversity hotspot, makes it difficult to track the migration routes during the Quaternary. In this study, we present the genetic characteristics of two isolated lynx populations in Southwest Taurus Mountains and the Turkish Caucasus as well as two individuals from Erzincan area. DNA purified from the ecological scat samples collected from Çığlıkara Nature Reserve in Elmalı-Antalya and Allahuekber Mountains in Sarıkamış-Kars, as well as two roadkill samples from Erzincan, has been analysed for phylogenetic markers such as the mitochondrial DNA control region and cytochrome b. The DNA sequences were compared with haplotypes previously detected in populations from Europe and the Caucasus in order to determine the evolutionary relationships of the populations. This study compares the current genetic structure of some of the Turkish lynx populations to the other lynx genetic data, mostly carried out with museum samples around the world. Three haplotypes were found in three different regions of Anatolia. The Northeast and Southwest populations harbour genetically distinct haplotypes, the latter one, a new haplotype: H13-TR is the only phylogenetic connection to the critically endangered Balkan lynx yet to be described.

  2. Feline leukemia virus and other pathogens as important threats to the survival of the critically endangered Iberian lynx (Lynx pardinus.

    Directory of Open Access Journals (Sweden)

    Marina L Meli

    Full Text Available The Iberian lynx (Lynx pardinus is considered the most endangered felid species in the world. In order to save this species, the Spanish authorities implemented a captive breeding program recruiting lynxes from the wild. In this context, a retrospective survey on prevalence of selected feline pathogens in free-ranging lynxes was initiated.We systematically analyzed the prevalence and importance of seven viral, one protozoan (Cytauxzoon felis, and several bacterial (e.g., hemotropic mycoplasma infections in 77 of approximately 200 remaining free-ranging Iberian lynxes of the Doñana and Sierra Morena areas, in Southern Spain, between 2003 and 2007. With the exception of feline immunodeficiency virus (FIV, evidence of infection by all tested feline pathogens was found in Iberian lynxes. Fourteen lynxes were feline leukemia virus (FeLV provirus-positive; eleven of these were antigenemic (FeLV p27 positive. All 14 animals tested negative for other viral infections. During a six-month period in 2007, six of the provirus-positive antigenemic lynxes died. Infection with FeLV but not with other infectious agents was associated with mortality (p<0.001. Sequencing of the FeLV surface glycoprotein gene revealed a common origin for ten of the eleven samples. The ten sequences were closely related to FeLV-A/61E, originally isolated from cats in the USA. Endogenous FeLV sequences were not detected.It was concluded that the FeLV infection most likely originated from domestic cats invading the lynx's habitats. Data available regarding the time frame, co-infections, and outcome of FeLV-infections suggest that, in contrast to the domestic cat, the FeLV strain affecting the lynxes in 2007 is highly virulent to this species. Our data argue strongly for vaccination of lynxes and domestic cats in and around lynx's habitats in order to prevent further spread of the virus as well as reduction the domestic cat population if the lynx population is to be maintained.

  3. LYNX community advocacy & service engagement (CASE) project final report.

    Science.gov (United States)

    2009-05-14

    This report is a final assessment of the Community Advocacy & Service Engagement (CASE) project, a LYNX-FTA research project designed : to study transit education and public engagement methods in Central Florida. In the Orlando area, as in other part...

  4. Ecology and conservation of lynx in the United States [Preface

    Science.gov (United States)

    Leonard F. Ruggiero

    2000-01-01

    When we began the task of elucidating the scientific basis for lynx conservation in June 1998, I had little idea how constrained our time would be. The request to do this job came from a consortium of federal land management agencies in response to the U.S. Fish and Wildlife Service’s "proposed rule" to list the Canada lynx as a threatened or endangered...

  5. Landscape location affects genetic variation of Canada lynx (Lynx canadensis)

    Science.gov (United States)

    M. K. Schwartz; L. S. Mills; Y. Ortega; L. F. Ruggiero; F. W. Allendorf

    2003-01-01

    The effect of a population's location on the landscape on genetic variation has been of interest to population genetics for more than half a century. However, most studies do not consider broadscale biogeography when interpreting genetic data. In this study, we propose an operational definition of a peripheral population, and then explore whether peripheral...

  6. Lynx web services for annotations and systems analysis of multi-gene disorders.

    Science.gov (United States)

    Sulakhe, Dinanath; Taylor, Andrew; Balasubramanian, Sandhya; Feng, Bo; Xie, Bingqing; Börnigen, Daniela; Dave, Utpal J; Foster, Ian T; Gilliam, T Conrad; Maltsev, Natalia

    2014-07-01

    Lynx is a web-based integrated systems biology platform that supports annotation and analysis of experimental data and generation of weighted hypotheses on molecular mechanisms contributing to human phenotypes and disorders of interest. Lynx has integrated multiple classes of biomedical data (genomic, proteomic, pathways, phenotypic, toxicogenomic, contextual and others) from various public databases as well as manually curated data from our group and collaborators (LynxKB). Lynx provides tools for gene list enrichment analysis using multiple functional annotations and network-based gene prioritization. Lynx provides access to the integrated database and the analytical tools via REST based Web Services (http://lynx.ci.uchicago.edu/webservices.html). This comprises data retrieval services for specific functional annotations, services to search across the complete LynxKB (powered by Lucene), and services to access the analytical tools built within the Lynx platform. © The Author(s) 2014. Published by Oxford University Press on behalf of Nucleic Acids Research.

  7. Ecology and conservation of lynx in the United States

    Science.gov (United States)

    Leonard F. Ruggiero; Keith B. Aubry; Steven W. Buskirk; Gary M. Koehler; Charles J. Krebs; Kevin S. McKelvey; John R. Squires

    1999-01-01

    Once found throughout the Rocky Mountains and forests of the northern states, the lynx now hides in pockets of its former range while feeding mostly on small animals like snowshoe hares. A team of government and university scientists review the newest scientific knowledge of this unique cat's history, distribution, and ecology. The chapters on this web site...

  8. Nuutuuyiglu Tuttuglu (The Lynx and the Two Caribou).

    Science.gov (United States)

    Pope, Mary L.; And Others

    This second grade elementary language text, designed for children in bilingual Inupiat-English programs in Ambler, Kobuk, Kiana, Noorvik, and Shungnak, contains a story about a lynx who tries to kill two caribou at one time but who is himself killed. Each page of text is illustrated with a black-and-white drawing. The English equivalent is given…

  9. Appendix B: Fisher, lynx, wolverine summary of distribution information

    Science.gov (United States)

    Mary Maj

    1994-01-01

    We present maps depicting distributions of fisher, lynx, and wolverine in the western United States since 1961. Comparison of past and current distributions of species can shed light on population persistence, periods of population isolation, meta-population structure, and important connecting landscapes. Information on the distribution of the American marten is not...

  10. Observations on the lynx Felis caracal in the Bedford district

    African Journals Online (AJOL)

    with, including mass and length, killing and feeding habits, breeding and litters ... van 108 eksemplare oor 'n tydperk van 3! jaar word ontleed. Verskeie ... Poison proved ineffective ... a lynx is reported the hounds are taken to the area before dawn (this is .... within a week of each other, but in each case the localities were far ...

  11. Performance analysis and kernel size study of the Lynx real-time operating system

    Science.gov (United States)

    Liu, Yuan-Kwei; Gibson, James S.; Fernquist, Alan R.

    1993-01-01

    This paper analyzes the Lynx real-time operating system (LynxOS), which has been selected as the operating system for the Space Station Freedom Data Management System (DMS). The features of LynxOS are compared to other Unix-based operating system (OS). The tools for measuring the performance of LynxOS, which include a high-speed digital timer/counter board, a device driver program, and an application program, are analyzed. The timings for interrupt response, process creation and deletion, threads, semaphores, shared memory, and signals are measured. The memory size of the DMS Embedded Data Processor (EDP) is limited. Besides, virtual memory is not suitable for real-time applications because page swap timing may not be deterministic. Therefore, the DMS software, including LynxOS, has to fit in the main memory of an EDP. To reduce the LynxOS kernel size, the following steps are taken: analyzing the factors that influence the kernel size; identifying the modules of LynxOS that may not be needed in an EDP; adjusting the system parameters of LynxOS; reconfiguring the device drivers used in the LynxOS; and analyzing the symbol table. The reductions in kernel disk size, kernel memory size and total kernel size reduction from each step mentioned above are listed and analyzed.

  12. Lynx1 and Aβ1-42 bind competitively to multiple nicotinic acetylcholine receptor subtypes

    DEFF Research Database (Denmark)

    Thomsen, Morten S; Arvaniti, Maria; Jensen, Majbrit M

    2016-01-01

    Lynx1 regulates synaptic plasticity in the brain by regulating nicotinic acetylcholine receptors (nAChRs). It is not known to which extent Lynx1 can bind to endogenous nAChR subunits in the brain or how this interaction is affected by Alzheimer's disease pathology. We apply affinity purification....... Incubation with Ws-Lynx1 decreases nicotine-mediated extracellular signal-regulated kinase phosphorylation in PC12 cells and striatal neurons, indicating that binding of Ws-Lynx1 is sufficient to inhibit signaling downstream of nAChRs. The effect of nicotine in PC12 cells is independent of α7 or α4β2 n...

  13. Assessing the suitability of central European landscapes for the reintroduction of Eurasian lynx

    Czech Academy of Sciences Publication Activity Database

    Schadt, S.; Revilla, E.; Wiegand, T.; Knauer, F.; Kaczensky, P.; Breitenmoser, U.; Bufka, L.; Červený, Jaroslav; Koubek, Petr; Huber, T.; Staniša, C.; Trepl, L.

    2002-01-01

    Roč. 39, č. 2 (2002), s. 189-203 ISSN 0021-8901 R&D Projects: GA AV ČR KSK6005114 Grant - others:Deutsche Bundesstiftung Umwelt(DE) AZ6000/596 Keywords : Lynx lynx * GIS * species reintroduction Subject RIV: EH - Ecology, Behaviour Impact factor: 2.902, year: 2002

  14. Eurasian lynx hunting red deer: is there an influence of a winter enclosure system?

    Czech Academy of Sciences Publication Activity Database

    Belotti, E.; Kreisinger, Jakub; Romportl, D.; Heurich, M.; Bufka, L.

    2014-01-01

    Roč. 60, č. 3 (2014), s. 441-457 ISSN 1612-4642 Institutional support: RVO:68081766 Keywords : Cervus elaphus * Habitat heterogeneity * Lynx lynx * Predation probability * Prey density * Supplementary feeding Subject RIV: EG - Zoology Impact factor: 1.634, year: 2014

  15. Influence of tourism and traffic on the Eurasian lynx hunting activity and daily movements

    Directory of Open Access Journals (Sweden)

    Belotti, E.

    2012-01-01

    Full Text Available Human presence influences survival of large carnivores in several ways and even outdoor activities can be a source of disturbance. As ungulate prey provide the Eurasian lynx (Lynx lynx with food for several nights and the pattern of lynx activity is mainly shaped by searching for and consuming large prey, the need to move decreases strongly while the prey is eaten. However, during the day, human activity may drive lynx to move to safe shelters and habitat features such as dense vegetation may increase tolerance. In the Bohemian Forest (Czech Republic, we found 116 prey killed by five GPS–collared lynxes. We tested whether the kill sites were located farther from roads or tourist trails than a set of randomly generated locations and whether presence of roads or tourist trails and habitat structure influenced the distance ‘kill site to daytime resting sites’. At night, with low human activity, lynxes did not avoid roads and even selected the surroundings of tourist trails. The distance ‘kill site to daytime resting sites’ correlated negatively with presence of habitat concealment and distance to tourist trails, suggesting that outdoor activities may have to be considered in lynx management plans.

  16. The return of the Iberian lynx to Portugal: local voices.

    Science.gov (United States)

    Lopes-Fernandes, Margarida; Espírito-Santo, Clara; Frazão-Moreira, Amélia

    2018-01-11

    Ethnographic research can help to establish dialog between conservationists and local people in reintroduction areas. Considering that predator reintroductions may cause local resistance, we assessed attitudes of different key actor profiles to the return of the Iberian lynx (Lynx pardinus) to Portugal before reintroduction started in 2015. We aimed to characterize a social context from an ethnoecological perspective, including factors such as local knowledge, perceptions, emotions, and opinions. We conducted semi-structured interviews (n = 131) in three different protected areas and observed practices and public meetings in order to describe reintroduction contestation, emotional involvement with the species, and local perceptions about conservation. Detailed content data analysis was undertaken and an open-ended codification of citations was performed with the support of ATLAS.ti. Besides the qualitative analyses, we further explored statistic associations between knowledge and opinions and compared different geographical areas and hunters with non-hunters among key actors. Local ecological knowledge encompassed the lynx but was not shared by the whole community. Both similarities and differences between local and scientific knowledge about the lynx were found. The discrepancies with scientific findings were not necessarily a predictor of negative attitudes towards reintroduction. Contestation issues around reintroduction differ between geographical areas but did not hinder an emotional attachment to the species and its identification as a territory emblem. Among local voices, financial compensation was significantly associated to hunters and nature tourism was cited the most frequent advantage of lynx presence. Materialistic discourses existed in parallel with non-economic factors and the existence of moral agreement with its protection. The considerable criticism and reference to restrictions by local actors concerning protected areas and conservation

  17. Fear or food ? abundance of red fox in relation to occurrence of lynx and wolf

    OpenAIRE

    Wikenros, Camilla; Aronsson, Malin; Liberg, Olof; Jarnemo, Anders; Hansson, Jessica; Wallgren, M?rtha; Sand, H?kan; Bergstr?m, Roger

    2017-01-01

    Apex predators may affect mesopredators through intraguild predation and/or supply of carrion from their prey, causing a trade-off between avoidance and attractiveness. We used wildlife triangle snow-tracking data to investigate the abundance of red fox (Vulpes vulpes) in relation to lynx (Lynx lynx) and wolf (Canis lupus) occurrence as well as land composition and vole (Microtus spp.)?density. Data from the Swedish wolf-monitoring system and VHF/GPS-collared wolves were used to study the eff...

  18. Distribution and status of lynx in the border region between Czech Republic, Germany and Austria

    Czech Academy of Sciences Publication Activity Database

    Wölfl, M.; Bufka, L.; Červený, Jaroslav; Koubek, Petr; Heurich, M.; Habel, H.; Huber, T.; Poost, W.

    2001-01-01

    Roč. 46, č. 2 (2001), s. 181-194 ISSN 0001-7051 R&D Projects: GA AV ČR IBS6093003 Institutional research plan: CEZ:AV0Z6093917 Keywords : Lynx lynx * Šumava mountains Subject RIV: EH - Ecology, Behaviour Impact factor: 0.652, year: 2001 http://acta.zbs.bialowieza.pl/contents/?art=2001-046-2-0181

  19. Reproductive traits in captive and free-ranging males of the critically endangered Iberian lynx (Lynx pardinus).

    Science.gov (United States)

    Gañán, Natalia; Sestelo, Adrián; Garde, J Julián; Martínez, Fernando; Vargas, Astrid; Sánchez, Iñigo; Pérez-Aspa, María José; López-Bao, José Vicente; Palomares, Francisco; Gomendio, Montserrat; Roldan, Eduardo R S

    2010-01-01

    The Iberian lynx (Lynx pardinus) is the most endangered felid in the world. Adequate genetic management of in situ and ex situ populations, and linkage between both, require knowledge on male reproductive biology and factors influencing it. We examined the influence of age, free-ranging versus captive conditions and seasonality on phenotypic, endocrine and semen traits, and links between reproductive traits and male fertility. Males had relatively small testes, produced low sperm numbers, a low proportion of normal sperm, and a high proportion of motile sperm. Young (2-year-old) males had lower testosterone levels, fewer sperm, and a lower proportion of motile and normal sperm than > or =4-year-old males. No major differences were found in semen traits before and after the mating season or between free-ranging and captive males, although the latter had better sperm motility. Males with larger relative testes weight and more sperm copulated more frequently, whereas males that produced more sperm with higher motility produced more cubs per female. In conclusion, small relative testes size and low sperm quality could indicate either low levels of sperm competition or high levels of inbreeding. Young males are probably subfertile; there is a slight trend for males in the captive breeding programme to have better semen quality than wild males, and males with higher sperm production are sexually more active and more fertile. These findings have major implications for decisions regarding which males should breed, provide samples for the genetic resource bank, or participate in programmes involving the use of assisted reproductive techniques.

  20. Lynx: Automatic Elderly Behavior Prediction in Home Telecare

    Science.gov (United States)

    Lopez-Guede, Jose Manuel; Moreno-Fernandez-de-Leceta, Aitor; Martinez-Garcia, Alexeiw; Graña, Manuel

    2015-01-01

    This paper introduces Lynx, an intelligent system for personal safety at home environments, oriented to elderly people living independently, which encompasses a decision support machine for automatic home risk prevention, tested in real-life environments to respond to real time situations. The automatic system described in this paper prevents such risks by an advanced analytic methods supported by an expert knowledge system. It is minimally intrusive, using plug-and-play sensors and machine learning algorithms to learn the elder's daily activity taking into account even his health records. If the system detects that something unusual happens (in a wide sense) or if something is wrong relative to the user's health habits or medical recommendations, it sends at real-time alarm to the family, care center, or medical agents, without human intervention. The system feeds on information from sensors deployed in the home and knowledge of subject physical activities, which can be collected by mobile applications and enriched by personalized health information from clinical reports encoded in the system. The system usability and reliability have been tested in real-life conditions, with an accuracy larger than 81%. PMID:26783514

  1. Lynx: Automatic Elderly Behavior Prediction in Home Telecare

    Directory of Open Access Journals (Sweden)

    Jose Manuel Lopez-Guede

    2015-01-01

    Full Text Available This paper introduces Lynx, an intelligent system for personal safety at home environments, oriented to elderly people living independently, which encompasses a decision support machine for automatic home risk prevention, tested in real-life environments to respond to real time situations. The automatic system described in this paper prevents such risks by an advanced analytic methods supported by an expert knowledge system. It is minimally intrusive, using plug-and-play sensors and machine learning algorithms to learn the elder’s daily activity taking into account even his health records. If the system detects that something unusual happens (in a wide sense or if something is wrong relative to the user’s health habits or medical recommendations, it sends at real-time alarm to the family, care center, or medical agents, without human intervention. The system feeds on information from sensors deployed in the home and knowledge of subject physical activities, which can be collected by mobile applications and enriched by personalized health information from clinical reports encoded in the system. The system usability and reliability have been tested in real-life conditions, with an accuracy larger than 81%.

  2. Invertebrates outcompete vertebrate facultative scavengers in simulated lynx kills in the Bavarian Forest National Park, Germany

    Directory of Open Access Journals (Sweden)

    Ray, R.–R.

    2014-06-01

    Full Text Available Understanding the role of scavengers in ecosystems is important for species conservation and wildlife management. We used road–killed animals, 15 in summer 2003 (June–August and nine in winter 2003/2004 (from November to January, to test the following hypotheses: (1 vertebrate scavengers such as raven (Corvus corax, red fox (Vulpes vulpes and wild boar (Sus scrofa consume a higher proportion of the carcasses than invertebrates; (2 the consumption rate is higher in winter than in summer due to the scarcity of other food resources; and (3 vertebrate scavengers are effective competitors of Eurasian lynx. We monitored 65 animals belonging to eight different mammal and bird species with camera traps. Surprisingly, Eurasian lynx (Lynx lynx was the most important vertebrate scavenger. However, in both seasons, the consumption of vertebrate scavengers was of minor impact. In summer, the carcasses were completely consumed within 10 days, mostly by invertebrates. In winter, only 5% of the carcasses were consumed within 10 days and 16% within 15 days. We conclude that vertebrates in the Bavarian Forest National Park are not strong competitors for lynx.

  3. Fear or food - abundance of red fox in relation to occurrence of lynx and wolf.

    Science.gov (United States)

    Wikenros, Camilla; Aronsson, Malin; Liberg, Olof; Jarnemo, Anders; Hansson, Jessica; Wallgren, Märtha; Sand, Håkan; Bergström, Roger

    2017-08-22

    Apex predators may affect mesopredators through intraguild predation and/or supply of carrion from their prey, causing a trade-off between avoidance and attractiveness. We used wildlife triangle snow-tracking data to investigate the abundance of red fox (Vulpes vulpes) in relation to lynx (Lynx lynx) and wolf (Canis lupus) occurrence as well as land composition and vole (Microtus spp.) density. Data from the Swedish wolf-monitoring system and VHF/GPS-collared wolves were used to study the effect of wolf pack size and time since wolf territory establishment on fox abundance. Bottom-up processes were more influential than top-down effects as the proportion of arable land was the key indicator of fox abundance at the landscape level. At this spatial scale, there was no effect of wolf abundance on fox abundance, whereas lynx abundance had a positive effect. In contrast, at the wolf territory level there was a negative effect of wolves on fox abundance when including detailed information of pack size and time since territory establishment, whereas there was no effect of lynx abundance. This study shows that different apex predator species may affect mesopredator abundance in different ways and that the results may be dependent on the spatiotemporal scale and resolution of the data.

  4. UnLynx: A Decentralized System for Privacy-Conscious Data Sharing

    Directory of Open Access Journals (Sweden)

    Froelicher David

    2017-10-01

    Full Text Available Current solutions for privacy-preserving data sharing among multiple parties either depend on a centralized authority that must be trusted and provides only weakest-link security (e.g., the entity that manages private/secret cryptographic keys, or leverage on decentralized but impractical approaches (e.g., secure multi-party computation. When the data to be shared are of a sensitive nature and the number of data providers is high, these solutions are not appropriate. Therefore, we present UnLynx, a new decentralized system for efficient privacy-preserving data sharing. We consider m servers that constitute a collective authority whose goal is to verifiably compute on data sent from n data providers. UnLynx guarantees the confidentiality, unlinkability between data providers and their data, privacy of the end result and the correctness of computations by the servers. Furthermore, to support differentially private queries, UnLynx can collectively add noise under encryption. All of this is achieved through a combination of a set of new distributed and secure protocols that are based on homomorphic cryptography, verifiable shuffling and zero-knowledge proofs. UnLynx is highly parallelizable and modular by design as it enables multiple security/privacy vs. runtime tradeoffs. Our evaluation shows that UnLynx can execute a secure survey on 400,000 personal data records containing 5 encrypted attributes, distributed over 20 independent databases, for a total of 2,000,000 ciphertexts, in 24 minutes.

  5. Expression of the Ly-6 family proteins Lynx1 and Ly6H in the rat brain is compartmentalized, cell-type specific, and developmentally regulated

    DEFF Research Database (Denmark)

    Thomsen, Morten Skøtt; Cinar, Betül; Jensen, Majbrit Myrup

    2014-01-01

    regarding the distribution and developmental regulation of these proteins in the brain. We use protein cross-linking and synaptosomal fractions to demonstrate that the Ly-6 proteins Lynx1 and Ly6H are membrane-bound proteins in the brain, which are present on the cell surface and localize to synaptic...... demonstrate that Lynx1 and Ly6H are expressed in cultured neurons, but not cultured micro- or astroglial cultures. In addition, Lynx1, but not Ly6H was detected in the CSF. Finally, we show that the Ly-6 proteins Lynx1, Lynx2, Ly6H, and PSCA, display distinct expression patterns during postnatal development...

  6. Habitat selection and risk of predation: re-colonization by lynx had limited impact on habitat selection by roe deer.

    Directory of Open Access Journals (Sweden)

    Gustaf Samelius

    Full Text Available Risk of predation is an evolutionary force that affects behaviors of virtually all animals. In this study, we examined how habitat selection by roe deer was affected by risk of predation by Eurasian lynx - the main predator of roe deer in Scandinavia. Specifically, we compared how habitat selection by roe deer varied (1 before and after lynx re-established in the study area and (2 in relation to habitat-specific risk of predation by lynx. All analyses were conducted at the spatial and temporal scales of home ranges and seasons. We did not find any evidence that roe deer avoided habitats in which the risk of predation by lynx was greatest and information-theoretic model selection showed that re-colonization by lynx had limited impact on habitat selection by roe deer despite lynx predation causing 65% of known mortalities after lynx re-colonized the area. Instead we found that habitat selection decreased when habitat availability increased for 2 of 5 habitat types (a pattern referred to as functional response in habitat selection. Limited impact of re-colonization by lynx on habitat selection by roe deer in this study differs from elk in North America altering both daily and seasonal patterns in habitat selection at the spatial scales of habitat patches and home ranges when wolves were reintroduced to Yellowstone National Park. Our study thus provides further evidence of the complexity by which animals respond to risk of predation and suggest that it may vary between ecosystems and predator-prey constellations.

  7. Habitat selection and risk of predation: re-colonization by lynx had limited impact on habitat selection by roe deer.

    Science.gov (United States)

    Samelius, Gustaf; Andrén, Henrik; Kjellander, Petter; Liberg, Olof

    2013-01-01

    Risk of predation is an evolutionary force that affects behaviors of virtually all animals. In this study, we examined how habitat selection by roe deer was affected by risk of predation by Eurasian lynx - the main predator of roe deer in Scandinavia. Specifically, we compared how habitat selection by roe deer varied (1) before and after lynx re-established in the study area and (2) in relation to habitat-specific risk of predation by lynx. All analyses were conducted at the spatial and temporal scales of home ranges and seasons. We did not find any evidence that roe deer avoided habitats in which the risk of predation by lynx was greatest and information-theoretic model selection showed that re-colonization by lynx had limited impact on habitat selection by roe deer despite lynx predation causing 65% of known mortalities after lynx re-colonized the area. Instead we found that habitat selection decreased when habitat availability increased for 2 of 5 habitat types (a pattern referred to as functional response in habitat selection). Limited impact of re-colonization by lynx on habitat selection by roe deer in this study differs from elk in North America altering both daily and seasonal patterns in habitat selection at the spatial scales of habitat patches and home ranges when wolves were reintroduced to Yellowstone National Park. Our study thus provides further evidence of the complexity by which animals respond to risk of predation and suggest that it may vary between ecosystems and predator-prey constellations.

  8. FF-LYNX: protocol and interfaces for the control and readout of future Silicon detectors

    Energy Technology Data Exchange (ETDEWEB)

    Amendola, A; Bianchi, G; Fanucci, L; Saponara, S; Tongiani, C [Universita di Pisa, Dipartimento di Ingegneria dell' Informazione (DII-EIT), Via G. Caruso 16, 56122 Pisa (Italy); Castaldi, R; Minuti, M; Verdini, P G [INFN, Sezione di Pisa, Largo B. Pontecorvo 3, 56018 Pisa (Italy); Incandela, J; Magazzu, G; Rossin, R, E-mail: Guido.Magazzu@pi.infn.i [University of California at Santa Barbara (UCSB), Department of Physics, 5113 Broida Hall, CA 93106 Santa Barbara (United States)

    2010-06-15

    The FF-LYNX protocol provides an innovative solution for the integrated distribution of Timing, Trigger and Control signals and the data readout in future High Energy Physics experiments. Transmitter and receiver interfaces implementing the FF-LYNX protocol have been simulated with a high-level simulator and in an FPGA based emulator. The design of the interfaces in a commercial CMOS technology as radiation tolerant and low power modules is ongoing and the submission of a test circuit is foreseen in fall 2010. The key features of the protocol are described in this paper as well as its possible application for the transmission from Silicon Trackers to trigger processors with short and constant latency of data to be used for the L1 trigger generation.

  9. Implications from XMM and Chandra Source Catalogs for Future Studies with Lynx

    Science.gov (United States)

    Ptak, Andrew

    2018-01-01

    Lynx will perform extremely sensitive X-ray surveys by combining very high-resolution imaging over a large field of view with a high effective area. These will include deep planned surveys and serendipitous source surveys. Here we discuss implications that can be gleaned from current Chandra and XMM-Newton serendipitous source surveys. These current surveys have discovered novel sources such as tidal disruption events, binary AGN, and ULX pulsars. In addition these surveys have detected large samples of normal galaxies, low-luminosity AGN and quasars due to the wide-area coverage of the Chandra and XMM-Newton source catalogs, allowing the evolution of these phenonema to be explored. The wide area Lynx surveys will probe down further in flux and will be coupled with very sensitive wide-area surveys such as LSST and SKA, allowing for detailed modeling of their SEDs and the discovery of rare, exotic sources and transient events.

  10. Software Development for the Kinematic Analysis of a Lynx 6 Robot Arm

    OpenAIRE

    Baki Koyuncu; Mehmet Güzel

    2007-01-01

    The kinematics of manipulators is a central problem in the automatic control of robot manipulators. Theoretical background for the analysis of the 5 Dof Lynx-6 educational Robot Arm kinematics is presented in this paper. The kinematics problem is defined as the transformation from the Cartesian space to the joint space and vice versa. The Denavit-Harbenterg (D-H) model of representation is used to model robot links and joints in this study. Both forward and inverse kinematics solutions for th...

  11. Characterization of regionally associated feline immunodeficiency virus (FIV) in bobcats (Lynx rufus).

    Science.gov (United States)

    Lagana, Danielle M; Lee, Justin S; Lewis, Jesse S; Bevins, Sarah N; Carver, Scott; Sweanor, Linda L; McBride, Roy; McBride, Caleb; Crooks, Kevin R; VandeWoude, Sue

    2013-07-01

    Feline immunodeficiency virus (FIV) classically infects felid species with highly divergent species-specific FIVs. However, recent studies have detected an FIV strain infecting both bobcats (Lynx rufus) and pumas (Puma concolor) in California and Florida. To further investigate this observation, we evaluated FIV from bobcats in Florida (n=25) and Colorado (n=80) between 2008 and 2011. Partial viral sequences from five Florida bobcats cluster with previously published sequences from Florida panthers. We did not detect FIV in Colorado bobcats.

  12. Lynx: a scalable solution utilising FPGAs for high performance data processing

    CSIR Research Space (South Africa)

    Focke, R

    2009-12-01

    Full Text Available .csir.co.za 1. HDL Uses • HDL for hardware simulation only - Model 3rd party hardware - Test bench for functional verification - Read and write files - Dynamic structures • HDL for FPGA firmware (or ASIC) - Not all language features - Register transfer... Topics © CSIR 2009 www.csir.co.za A. Mentor Graphics HDL Author & Modelsim • Lynx LVDS Design © CSIR 2009 www.csir.co.za A. Mentor Graphics HDL Author • Hierarchical Graphical Design for HDL & Modelsim...

  13. Sustainably Harvesting a Large Carnivore? Development of Eurasian Lynx Populations in Norway During 160 Years of Shifting Policy

    Science.gov (United States)

    Linnell, John D. C.; Broseth, Henrik; Odden, John; Nilsen, Erlend Birkeland

    2010-05-01

    The management of large carnivores in multiuse landscapes is always controversial, and managers need to balance a wide range of competing interests. Hunter harvest is often used to limit population size and distribution but is proving to be both controversialand technically challenging. Eurasian lynx ( Lynx lynx) are currently managed as a game species in Norway. We describe an adaptive management approach where quota setting is based on an annual census and chart the population development through the period 1996-2008, as management has become significantly more sophisticated and better informed by the increased availability of scientific data. During this period the population has been through a period of high quotas and population decline caused by fragmented management authority and overoptimistic estimates of lynx reproduction, followed by a period of recovery due to quota reductions. The modern management regime is placed in the context of shifting policy during the last 160 years, during which management goals have moved from extermination stimulated by bounties, through a short phase of protection, and now to quota-regulated harvest. Much management authority has also been delegated from central to local levels. We conclude that adaptive management has the potential to keep the population within some bounded limits, although there will inevitably be fluctuation.

  14. Gene Sets for Utilization of Primary and Secondary Nutrition Supplies in the Distal Gut of Endangered Iberian Lynx

    Science.gov (United States)

    Alcaide, María; Messina, Enzo; Richter, Michael; Bargiela, Rafael; Peplies, Jörg; Huws, Sharon A.; Newbold, Charles J.; Golyshin, Peter N.; Simón, Miguel A.; López, Guillermo; Yakimov, Michail M.; Ferrer, Manuel

    2012-01-01

    Recent studies have indicated the existence of an extensive trans-genomic trans-mural co-metabolism between gut microbes and animal hosts that is diet-, host phylogeny- and provenance-influenced. Here, we analyzed the biodiversity at the level of small subunit rRNA gene sequence and the metabolic composition of 18 Mbp of consensus metagenome sequences and activity characteristics of bacterial intra-cellular extracts, in wild Iberian lynx (Lynx pardinus) fecal samples. Bacterial signatures (14.43% of all of the Firmicutes reads and 6.36% of total reads) related to the uncultured anaerobic commensals Anaeroplasma spp., which are typically found in ovine and bovine rumen, were first identified. The lynx gut was further characterized by an over-representation of ‘presumptive’ aquaporin aqpZ genes and genes encoding ‘active’ lysosomal-like digestive enzymes that are possibly needed to acquire glycerol, sugars and amino acids from glycoproteins, glyco(amino)lipids, glyco(amino)glycans and nucleoside diphosphate sugars. Lynx gut was highly enriched (28% of the total glycosidases) in genes encoding α-amylase and related enzymes, although it exhibited low rate of enzymatic activity indicative of starch degradation. The preponderance of β-xylosidase activity in protein extracts further suggests lynx gut microbes being most active for the metabolism of β-xylose containing plant N-glycans, although β-xylosidases sequences constituted only 1.5% of total glycosidases. These collective and unique bacterial, genetic and enzymatic activity signatures suggest that the wild lynx gut microbiota not only harbors gene sets underpinning sugar uptake from primary animal tissues (with the monotypic dietary profile of the wild lynx consisting of 80–100% wild rabbits) but also for the hydrolysis of prey-derived plant biomass. Although, the present investigation corresponds to a single sample and some of the statements should be considered qualitative, the data most likely

  15. Gene sets for utilization of primary and secondary nutrition supplies in the distal gut of endangered Iberian lynx.

    Directory of Open Access Journals (Sweden)

    María Alcaide

    Full Text Available Recent studies have indicated the existence of an extensive trans-genomic trans-mural co-metabolism between gut microbes and animal hosts that is diet-, host phylogeny- and provenance-influenced. Here, we analyzed the biodiversity at the level of small subunit rRNA gene sequence and the metabolic composition of 18 Mbp of consensus metagenome sequences and activity characteristics of bacterial intra-cellular extracts, in wild Iberian lynx (Lynx pardinus fecal samples. Bacterial signatures (14.43% of all of the Firmicutes reads and 6.36% of total reads related to the uncultured anaerobic commensals Anaeroplasma spp., which are typically found in ovine and bovine rumen, were first identified. The lynx gut was further characterized by an over-representation of 'presumptive' aquaporin aqpZ genes and genes encoding 'active' lysosomal-like digestive enzymes that are possibly needed to acquire glycerol, sugars and amino acids from glycoproteins, glyco(aminolipids, glyco(aminoglycans and nucleoside diphosphate sugars. Lynx gut was highly enriched (28% of the total glycosidases in genes encoding α-amylase and related enzymes, although it exhibited low rate of enzymatic activity indicative of starch degradation. The preponderance of β-xylosidase activity in protein extracts further suggests lynx gut microbes being most active for the metabolism of β-xylose containing plant N-glycans, although β-xylosidases sequences constituted only 1.5% of total glycosidases. These collective and unique bacterial, genetic and enzymatic activity signatures suggest that the wild lynx gut microbiota not only harbors gene sets underpinning sugar uptake from primary animal tissues (with the monotypic dietary profile of the wild lynx consisting of 80-100% wild rabbits but also for the hydrolysis of prey-derived plant biomass. Although, the present investigation corresponds to a single sample and some of the statements should be considered qualitative, the data most likely

  16. Comparative VME Performance Tests for MEN A20 Intel-L865 and RIO-3 PPC-LynxOS platforms

    CERN Document Server

    Andersen, M; CERN. Geneva. BE Department

    2009-01-01

    This benchmark note presents test results from reading values over VME using different methods and different sizes of data registers, running on two different platforms Intel-L865 and PPC-LynxOS. We find that the PowerPC is a factor 3 faster in accessing an array of contiguous VME memory locations. Block transfer and DMA read accesses are also tested and compared with conventional single access reads.

  17. Long-range gene flow and the effects of climatic and ecological factors on genetic structuring in a large, solitary carnivore: the Eurasian lynx.

    Directory of Open Access Journals (Sweden)

    Mirosław Ratkiewicz

    Full Text Available Due to their high mobility, large terrestrial predators are potentially capable of maintaining high connectivity, and therefore low genetic differentiation among populations. However, previous molecular studies have provided contradictory findings in relation to this. To elucidate patterns of genetic structure in large carnivores, we studied the genetic variability of the Eurasian lynx, Lynx lynx throughout north-eastern Europe using microsatellite, mitochondrial DNA control region and Y chromosome-linked markers. Using SAMOVA we found analogous patterns of genetic structure based on both mtDNA and microsatellites, which coincided with a relatively little evidence for male-biased dispersal. No polymorphism for the cytochrome b and ATP6 mtDNA genes and Y chromosome-linked markers were found. Lynx inhabiting a large area encompassing Finland, the Baltic countries and western Russia formed a single genetic unit, while some marginal populations were clearly divergent from others. The existence of a migration corridor was suggested to correspond with distribution of continuous forest cover. The lowest variability (in both markers was found in lynx from Norway and Białowieża Primeval Forest (BPF, which coincided with a recent demographic bottleneck (Norway or high habitat fragmentation (BPF. The Carpathian population, being monomorphic for the control region, showed relatively high microsatellite diversity, suggesting the effect of a past bottleneck (e.g. during Last Glacial Maximum on its present genetic composition. Genetic structuring for the mtDNA control region was best explained by latitude and snow cover depth. Microsatellite structuring correlated with the lynx's main prey, especially the proportion of red deer (Cervus elaphus in its diet. Eurasian lynx are capable of maintaining panmictic populations across eastern Europe unless they are severely limited by habitat continuity or a reduction in numbers. Different correlations of mtDNA and

  18. Gene flow and pathogen transmission among bobcats (Lynx rufus) in a fragmented urban landscape

    Science.gov (United States)

    Lee, Justin S.; Ruell, Emily W.; Boydston, Erin E.; Lyren, Lisa M.; Alonso, Robert S.; Troyer, Jennifer L.; Crooks, Kevin R.; VandeWoude, Sue

    2012-01-01

    Urbanization can result in the fragmentation of once contiguous natural landscapes into a patchy habitat interspersed within a growing urban matrix. Animals living in fragmented landscapes often have reduced movement among habitat patches because of avoidance of intervening human development, which potentially leads to both reduced gene flow and pathogen transmission between patches. Mammalian carnivores with large home ranges, such as bobcats (Lynx rufus), may be particularly sensitive to habitat fragmentation. We performed genetic analyses on bobcats and their directly transmitted viral pathogen, feline immunodeficiency virus (FIV), to investigate the effects of urbanization on bobcat movement. We predicted that urban development, including major freeways, would limit bobcat movement and result in genetically structured host and pathogen populations. We analysed molecular markers from 106 bobcats and 19 FIV isolates from seropositive animals in urban southern California. Our findings indicate that reduced gene flow between two primary habitat patches has resulted in genetically distinct bobcat subpopulations separated by urban development including a major highway. However, the distribution of genetic diversity among FIV isolates determined through phylogenetic analyses indicates that pathogen genotypes are less spatially structured--exhibiting a more even distribution between habitat fragments. We conclude that the types of movement and contact sufficient for disease transmission occur with enough frequency to preclude structuring among the viral population, but that the bobcat population is structured owing to low levels of effective bobcat migration resulting in gene flow. We illustrate the utility in using multiple molecular markers that differentially detect movement and gene flow between subpopulations when assessing connectivity.

  19. Study of the Lynx-Cancer void galaxies. - V. The extremely isolated galaxy UGC 4722

    Science.gov (United States)

    Chengalur, J. N.; Pustilnik, S. A.; Makarov, D. I.; Perepelitsyna, Y. A.; Safonova, E. S.; Karachentsev, I. D.

    2015-04-01

    We present a detailed study of the extremely isolated Sdm galaxy UGC 4722 (MB = -17.4) located in the nearby Lynx-Cancer void. UGC 4722 is a member of the Catalogue of Isolated Galaxies, and has also been identified as one of the most isolated galaxies in the Local Supercluster. Optical images of the galaxy however show that it has a peculiar morphology with an elongated ˜14 kpc-long plume. New observations with the Russian 6-m telescope (BTA) and the Giant Metrewave Radio Telescope (GMRT) of the ionized and neutral gas in UGC 4722 reveal the second component responsible for the disturbed morphology of the system. This is a small, almost completely destroyed, very gas-rich dwarf (MB = -15.2, M(H I)/LB ˜ 4.3) We estimate the oxygen abundance for both galaxies to be 12 + log (O/H) ˜ 7.5-7.6 which is two to three times lower than what is expected from the luminosity-metallicity relation for similar galaxies in denser environments. The ugr colours of the plume derived from Sloan Digital Sky Survey (SDSS) images are consistent with a simple stellar population with a post starburst age of 0.45-0.5 Gyr. This system hence appears to be the first known case of a minor merger with a prominent tidal feature consisting of a young stellar population.

  20. Non-Deforming, High-Reflectance X-ray Coatings for Lynx and Other Future Missions

    Science.gov (United States)

    Windt, David

    The overarching challenge addressed by this proposal is the development of highreflectance, high-resolution X-ray mirrors, to be used for the construction of lightweight X-ray telescopes for future NASA astronomy missions such as Lynx and others. The proposal's two specific aims are: 1) the development of optimized iridium-based interference coatings for the 0.1–10 keV band; and 2) the development of methods to mitigate coating-stress-induced substrate deformations in thin-shell glass and Si mirror segments. These goals will be achieved by building on established film deposition techniques and metrology infrastructure for X-ray optics that have been developed and advanced by the PI through APRA funding since 1999. Specific Aim #1: Interference Coatings for the 0.1–10 keV Energy Band Telescope effective area can be maximized by using Ir-based reflective coatings that exploit optical interference to provide higher reflectance than Ir alone. However, only preliminary investigations of such coatings have been conducted thus far; more research is required to fully optimize these coatings for maximum performance, to experimentally determine the coating designs that are feasible, and to determine the achievable X-ray reflectance, film stress, surface roughness, and thermal and temporal stability. The first specific aim of this proposal is to reach these very goals through a comprehensive research program. Demonstration of the achievable reflectance, stress, and roughness in stable, optimized coatings will in turn facilitate global telescope design optimization, by identifying the best coating for each mirror shell based on incidence angle, and on telescope effective-area and field-of-view requirements. The research has the potential to greatly increase the effective area of future X-ray telescopes. Specific Aim #2: Mitigation of Coating-Stress-Induced Substrate Deformations High-quality films of Ir and other candidate materials (e.g., B4C) to be investigated for the 0

  1. Population and genetic outcomes 20 years after reintroducing bobcats (Lynx rufus) to Cumberland Island, Georgia USA

    Science.gov (United States)

    Diefenbach, Duane R.; Hansen, Leslie A.; Bohling, Justin H.; Miller-Butterworth, Cassandra

    2015-01-01

    In 1988–1989, 32 bobcats Lynx rufus were reintroduced to Cumberland Island (CUIS), Georgia, USA, from which they had previously been extirpated. They were monitored intensively for 3 years immediately post-reintroduction, but no estimation of the size or genetic diversity of the population had been conducted in over 20 years since reintroduction. We returned to CUIS in 2012 to estimate abundance and effective population size of the present-day population, as well as to quantify genetic diversity and inbreeding. We amplified 12 nuclear microsatellite loci from DNA isolated from scats to establish genetic profiles to identify individuals. We used spatially explicit capture–recapture population estimation to estimate abundance. From nine unique genetic profiles, we estimate a population size of 14.4 (SE = 3.052) bobcats, with an effective population size (Ne) of 5–8 breeding individuals. This is consistent with predictions of a population viability analysis conducted at the time of reintroduction, which estimated the population would average 12–13 bobcats after 10 years. We identified several pairs of related bobcats (parent-offspring and full siblings), but ~75% of the pairwise comparisons were typical of unrelated individuals, and only one individual appeared inbred. Despite the small population size and other indications that it has likely experienced a genetic bottleneck, levels of genetic diversity in the CUIS bobcat population remain high compared to other mammalian carnivores. The reintroduction of bobcats to CUIS provides an opportunity to study changes in genetic diversity in an insular population without risk to this common species. Opportunities for natural immigration to the island are limited; therefore, continued monitoring and supplemental bobcat reintroductions could be used to evaluate the effect of different management strategies to maintain genetic diversity and population viability. The successful reintroduction and maintenance of a

  2. Antibody detection and molecular characterization of toxoplasma gondii from bobcats (Lynx rufus), domestic cats (Felis catus), and wildlife from Minnesota, USA

    Science.gov (United States)

    Little is known of the epidemiology of toxoplasmosis in Minnesota. In this study, we evaluated Toxoplasma gondii infection in 50 wild bobcats (Lynx rufus) and 75 other animals on/near 10 cattle farms. Antibodies to T. gondii were assayed in serum samples or tissue fluids by the modified agglutinatio...

  3. Variability in assays used for detection of lentiviral infection in bobcats (Lynx rufus), pumas (Puma concolor), and ocelots (Leopardus pardalis)

    Science.gov (United States)

    Franklin, S.P.; Troyer, J.L.; TerWee, J.A.; Lyren, L.M.; Kays, R.W.; Riley, S.P.D.; Boyce, W.M.; Crooks, K.R.; VandeWoude, S.

    2007-01-01

    Although lentiviruses similar to feline immunodeficiency virus (FIV) are known to infect numerous felid species, the relative utility of assays used for detecting lentiviral infection has not been compared for many of these hosts. We tested bobcats (Lynx rufus), pumas (Felis concolor), and ocelots (Leopardus pardalis) for exposure to lentivirus using five different assays: puma lentivirus (PLV), African lion lentivirus (LLV), and domestic cat FIV-based immunoblots, a commercially available enzyme-linked immunosorbent assay (ELISA) kit, and nested polymerase chain reaction (PCR). Puma lentivirus immunoblots identified more seropositive individuals than the other antibody-detection assays. The commercial ELISA provided a fair ability to recognize seropositive samples when compared with PLV immunoblot for screening bobcats and ocelots, but not pumas. Polymerase chain reaction identified fewer positive samples than PLV immunoblot for all three species. Immunoblot results were equivalent whether the sample tested was serum, plasma, or whole blood. The results from this study and previous investigations suggest that the PLV immunoblot has the greatest ability to detect reactive samples when screening wild felids of North America and is unlikely to produce false positive results. However, the commercial ELISA kit may provide ap adequate alternative for screening of some species and is more easily adapted to field conditions. ?? Wildlife Disease Association 2007.

  4. Fused silica segments: a possible solution for x-ray telescopes with very high angular resolution like Lynx/XRS

    Science.gov (United States)

    Salmaso, Bianca; Basso, Stefano; Civitani, Marta; Ghigo, Mauro; Hołyszko, Joanna; Spiga, Daniele; Vecchi, Gabriele; Pareschi, Giovanni

    2017-09-01

    In order to look beyond Chandra, the Lynx/XRS mission has been proposed in USA and is currently studied by NASA. The optic will have an effective area of 2.5 m2 and an angular resolution of 0.5 arcsec HEW at 1 keV. In order to fulfill these requirements different technologies are considered, with the approaches of both full and segmented shells (that, possibly, can be also combined together). Concerning the production of segmented mirrors, a variety of thin substrates (glass, metal, silicon) are envisaged, that can be produced using both direct polishing or replication methods. Innovative post-fabrication correction methods (such as piezoelectric or magneto-restrictive film actuators on the back surface, differential deposition, ion implantation) are being also considered in order to reach the final tolerances. In this paper we are presenting a technology development based on fused silica (SiO2) segmented substrates, owing the low coefficient of thermal expansion of Fused Silica and its high chemical stability compared to other glasses. Thin SiO2 segmented substrates (typically 2 mm thick) are figured by direct polishing combined with final profile ion figuring correction, while the roughness reduction is reached with pitch tools. For the profile and roughness correction, the segments are glued to a substrate. In this paper we present the current status of this technology.

  5. Forecasts for the Canadian Lynx time series using method that bombine neural networks, wavelet shrinkage and decomposition

    Directory of Open Access Journals (Sweden)

    Levi Lopes Teixeira

    2015-12-01

    Full Text Available Time series forecasting is widely used in various areas of human knowledge, especially in the planning and strategic direction of companies. The success of this task depends on the forecasting techniques applied. In this paper, a hybrid approach to project time series is suggested. To validate the methodology, a time series already modeled by other authors was chosen, allowing the comparison of results. The proposed methodology includes the following techniques: wavelet shrinkage, wavelet decomposition at level r, and artificial neural networks (ANN. Firstly, a time series to be forecasted is submitted to the proposed wavelet filtering method, which decomposes it to components of trend and linear residue. Then, both are decomposed via level r wavelet decomposition, generating r + 1 Wavelet Components (WCs for each one; and then each WC is individually modeled by an ANN. Finally, the predictions for all WCs are linearly combined, producing forecasts to the underlying time series. For evaluating purposes, the time series of Canadian Lynx has been used, and all results achieved by the proposed method were better than others in existing literature.

  6. Bobcats (Lynx rufus) as a Model Organism to Investigate the Effects of Roads on Wide-Ranging Carnivores.

    Science.gov (United States)

    Litvaitis, John A; Reed, Gregory C; Carroll, Rory P; Litvaitis, Marian K; Tash, Jeffrey; Mahard, Tyler; Broman, Derek J A; Callahan, Catherine; Ellingwood, Mark

    2015-06-01

    We are using bobcats (Lynx rufus) as a model organism to examine how roads affect the abundance, distribution, and genetic structure of a wide-ranging carnivore. First, we compared the distribution of bobcat-vehicle collisions to road density and then estimated collision probabilities for specific landscapes using a moving window with road-specific traffic volume. Next, we obtained incidental observations of bobcats from the public, camera-trap detections, and locations of bobcats equipped with GPS collars to examine habitat selection. These data were used to generate a cost-surface map to investigate potential barrier effects of roads. Finally, we have begun an examination of genetic structure of bobcat populations in relation to major road networks. Distribution of vehicle-killed bobcats was correlated with road density, especially state and interstate highways. Collision models suggested that some regions may function as demographic sinks. Simulated movements in the context of the cost-surface map indicated that some major roads may be barriers. These patterns were supported by the genetic structure of bobcats. The sharpest divisions among genetically distinct demes occurred along natural barriers (mountains and large lakes) and in road-dense regions. In conclusion, our study has demonstrated the utility of using bobcats as a model organism to understand the variety of threats that roads pose to a wide-ranging species. Bobcats may also be useful as one of a group of focal species while developing approaches to maintain existing connectivity or mitigate the negative effects of roads.

  7. Characterization of the commercially-available fluorescent chloroquine-BODIPY conjugate, LynxTag-CQGREEN, as a marker for chloroquine resistance and uptake in a 96-well plate assay.

    Directory of Open Access Journals (Sweden)

    Cheryl C Y Loh

    Full Text Available Chloroquine was a cheap, extremely effective drug against Plasmodium falciparum until resistance arose. One approach to reversing resistance is the inhibition of chloroquine efflux from its site of action, the parasite digestive vacuole. Chloroquine accumulation studies have traditionally relied on radiolabelled chloroquine, which poses several challenges. There is a need for development of a safe and biologically relevant substitute. We report here a commercially-available green fluorescent chloroquine-BODIPY conjugate, LynxTag-CQGREEN, as a proxy for chloroquine accumulation. This compound localized to the digestive vacuole of the parasite as observed under confocal microscopy, and inhibited growth of chloroquine-sensitive strain 3D7 more extensively than in the resistant strains 7G8 and K1. Microplate reader measurements indicated suppression of LynxTag-CQGREEN efflux after pretreatment of parasites with known reversal agents. Microsomes carrying either sensitive- or resistant-type PfCRT were assayed for uptake; resistant-type PfCRT exhibited increased accumulation of LynxTag-CQGREEN, which was suppressed by pretreatment with known chemosensitizers. Eight laboratory strains and twelve clinical isolates were sequenced for PfCRT and Pgh1 haplotypes previously reported to contribute to drug resistance, and pfmdr1 copy number and chloroquine IC50s were determined. These data were compared with LynxTag-CQGREEN uptake/fluorescence by multiple linear regression to identify genetic correlates of uptake. Uptake of the compound correlated with the logIC50 of chloroquine and, more weakly, a mutation in Pgh1, F1226Y.

  8. Use of stratigraphic models as soft information to constrain stochastic modeling of rock properties: Development of the GSLIB-Lynx integration module

    International Nuclear Information System (INIS)

    Cromer, M.V.; Rautman, C.A.

    1995-10-01

    Rock properties in volcanic units at Yucca Mountain are controlled largely by relatively deterministic geologic processes related to the emplacement, cooling, and alteration history of the tuffaceous lithologic sequence. Differences in the lithologic character of the rocks have been used to subdivide the rock sequence into stratigraphic units, and the deterministic nature of the processes responsible for the character of the different units can be used to infer the rock material properties likely to exist in unsampled regions. This report proposes a quantitative, theoretically justified method of integrating interpretive geometric models, showing the three-dimensional distribution of different stratigraphic units, with numerical stochastic simulation techniques drawn from geostatistics. This integration of soft, constraining geologic information with hard, quantitative measurements of various material properties can produce geologically reasonable, spatially correlated models of rock properties that are free from stochastic artifacts for use in subsequent physical-process modeling, such as the numerical representation of ground-water flow and radionuclide transport. Prototype modeling conducted using the GSLIB-Lynx Integration Module computer program, known as GLINTMOD, has successfully demonstrated the proposed integration technique. The method involves the selection of stratigraphic-unit-specific material-property expected values that are then used to constrain the probability function from which a material property of interest at an unsampled location is simulated

  9. A baseline and watershed assessment in the Lynx Creek, Brenot Creek, and Portage Creek watersheds near Hudson's Hope, BC : summary report

    International Nuclear Information System (INIS)

    Matscha, G.; Sutherland, D.

    2005-06-01

    This report summarized a baseline monitoring program for the Lynx Creek, Brenot Creek, and Portage Creek watersheds located near Hudson's Hope, British Columbia (BC). The monitoring program was designed to more accurately determine the effects of potential coalbed gas developments in the region, as well as to assess levels of agricultural and forest harvesting, and the impacts of current land use activities on water quantity and quality. Water quality was sampled at 18 sites during 5 different flow regimes, including summer and fall low flows; ice cover; spring run-off; and high flows after a heavy summer rain event. Sample sites were located up and downstream of both forest and agricultural activities. The water samples were analyzed for 70 contaminants including ions, nutrients, metals, hydrocarbons, and hydrocarbon fractions. Results showed that while many analyzed parameters met current BC water quality guidelines, total organic carbon, manganese, cadmium, E. coli, fecal coliforms, and fecal streptococci often exceeded recommended guidelines. Aluminum and cobalt values exceeded drinking water guidelines. The samples also had a slightly alkaline pH and showed high conductance. A multiple barrier approach was recommended to reduce potential risks of contamination from the watersheds. It was concluded that a more refined bacteria source tracking method is needed to determine whether fecal pollution has emanated from human, livestock or wildlife sources. 1 tab., 9 figs

  10. A hybrid concept (segmented plus monolithic fused silica shells) for a high-throughput and high-angular resolution x-ray mission (Lynx/X-Ray Surveyor like)

    Science.gov (United States)

    Basso, Stefano; Civitani, Marta; Pareschi, Giovanni; Parodi, Giancarlo

    2017-09-01

    Lynx is a large area and high angular resolution X-ray mission being studied by NASA to be presented to the next Decadal Survey for the implementation in the next decade. It aims to realize an X-ray telescope with the effective area similar to Athena (2 m2 at 1 keV) but with the same angular resolution of Chandra and a much larger Field Of View (up 20 arcmin x 20 arcmin). The science of X-ray Surveyor requires a large-throughput mirror assembly with sub-arcsec angular resolution. These future X-ray mirrors have a set of requirements which, collectively, represents very substantial advances over any currently in operation or planned for missions other than X-ray Surveyor. Of particular importance is achieving low mass per unit collecting area, while maintaining Chandra like angular resolution. Among the possible solutions under study, the direct polishing of both thin monolithic pseudo-cylindrical shells and segments made of fused silica are being considered as viable solutions for the implementation of the mirrors. Fused silica has very good thermomechanical parameters (including a very low CTE), making the material particularly well suited for for the production of the Lynx mirrors. It should be noted that the use of close shells is also very attractive, since the operations for the integration of the shells will be greatly simplified and the area lost due to the vignetting from the interfacing structures minimized even if the management of such big (diameter of 3 m) and thin shells have to be demonstrated. In this paper we will discuss a possible basic layout for a full shell mirror and a hybrid concept (segmented plus monolithic shells made of fused silica) as a second solution, for the Lynx/XRS telescope, discussing preliminary results in terms of optical and mechanical performance.

  11. Isolation and Genetic Characterization of Toxoplasma gondii from Black Bears (Ursus americanus), Bobcats (Lynx rufus), and Feral Cats (Felis catus) from Pennsylvania.

    Science.gov (United States)

    Dubey, Jitender P; Verma, Shiv K; Calero-Bernal, Rafael; Cassinelli, Ana B; Kwok, Oliver C H; Van Why, Kyle; Su, Chunlei; Humphreys, Jan G

    2015-01-01

    Toxoplasma gondii infects virtually all warm-blooded hosts worldwide. Recently, attention has been focused on the genetic diversity of the parasite to explain its pathogenicity in different hosts. It has been hypothesized that interaction between feral and domestic cycles of T. gondii may increase unusual genotypes in domestic cats and facilitate transmission of potentially more pathogenic genotypes to humans, domestic animals, and wildlife. In the present study, we tested black bear (Ursus americanus), bobcat (Lynx rufus), and feral cat (Felis catus) from the state of Pennsylvania for T. gondii infection. Antibodies to T. gondii were found in 32 (84.2%) of 38 bears, both bobcats, and 2 of 3 feral cats tested by the modified agglutination test (cut off titer 1:25). Hearts from seropositive animals were bioassayed in mice, and viable T. gondii was isolated from 3 of 32 bears, 2 of 2 bobcats, and 2 of 3 feral cats. DNA isolated from culture-derived tachyzoites of these isolates was characterized using multilocus PCR-RFLP markers. Three genotypes were revealed, including ToxoDB PCR-RFLP genotype #1 or #3 (Type II, 1 isolate), #5 (Type 12, 3 isolates), and #216 (3 isolates), adding to the evidence of genetic diversity of T. gondii in wildlife in Pennsylvania. Pathogenicity of 3 T. gondii isolates (all #216, 1 from bear, and 2 from feral cat) was determined in outbred Swiss Webster mice; all three were virulent causing 100% mortality. Results indicated that highly mouse pathogenic strains of T. gondii are circulating in wildlife, and these strains may pose risk to infect human through consuming of game meat. Published 2014. This article is a U.S. Government work and is in the public domain in the USA.

  12. EARLY-TYPE GALAXIES AT z = 1.3. I. THE LYNX SUPERCLUSTER: CLUSTER AND GROUPS AT z = 1.3. MORPHOLOGY AND COLOR-MAGNITUDE RELATION

    International Nuclear Information System (INIS)

    Mei, Simona; Raichoor, Anand; Huertas-Company, Marc; Adam Stanford, S.; Rettura, Alessandro; Jee, Myungkook J.; Holden, Brad P.; Illingworth, Garth D.; Postman, Marc; Nakata, Fumiaki; Kodama, Tadayuki; Finoguenov, Alexis; Ford, Holland C.; Rosati, Piero; Tanaka, Masayuki; Koyama, Yusei; Shankar, Francesco; Carrasco, Eleazar R.; Demarco, Ricardo; Eisenhardt, Peter

    2012-01-01

    We confirm the detection of three groups in the Lynx supercluster, at z ≈ 1.3, through spectroscopic follow-up and X-ray imaging, and we give estimates for their redshifts and masses. We study the properties of the group galaxies compared to the two central clusters, RX J0849+4452 and RX J0848+4453. Using spectroscopic follow-up and multi-wavelength photometric redshifts, we select 89 galaxies in the clusters, of which 41 are spectroscopically confirmed, and 74 galaxies in the groups, of which 25 are spectroscopically confirmed. We morphologically classify galaxies by visual inspection, noting that our early-type galaxy (ETG) sample would have been contaminated at the 30%-40% level by simple automated classification methods (e.g., based on Sérsic index). In luminosity-selected samples, both clusters and groups show high fractions of bulge-dominated galaxies with a diffuse component that we visually identified as a disk and which we classified as bulge-dominated spirals, e.g., Sas. The ETG fractions never rise above ≈50% in the clusters, which is low compared to the fractions observed in other massive clusters at z ≈ 1. In the groups, ETG fractions never exceed ≈25%. However, overall bulge-dominated galaxy fractions (ETG plus Sas) are similar to those observed for ETGs in clusters at z ∼ 1. Bulge-dominated galaxies visually classified as spirals might also be ETGs with tidal features or merger remnants. They are mainly red and passive, and span a large range in luminosity. Their star formation seems to have been quenched before experiencing a morphological transformation. Because their fraction is smaller at lower redshifts, they might be the spiral population that evolves into ETGs. For mass-selected samples of galaxies with masses M > 10 10.6 M ☉ within Σ > 500 Mpc –2 , the ETG and overall bulge-dominated galaxy fractions show no significant evolution with respect to local clusters, suggesting that morphological transformations might occur at lower

  13. Conservation challenges of managing lynx

    Science.gov (United States)

    John R. Squires

    2005-01-01

    Yellowstone National Park is hallowed ground when it comes to wildlife in America. The very word “Yellowstone” conjures up images of grizzly bears digging tubers, bands of elk dotting the landscape, and gray wolves pursuing elk along the Lamar River. However, Yellowstone also provides habitat to one of the rarest cats in the continental United States: the...

  14. LYNX: A Linked Eulerian and Lagrangian Code. Volume II. LYNX Computer Listing

    Science.gov (United States)

    1975-11-01

    AS »TOUMP ,PMlN it« , JMAX • NCYC , ISEP .OELZZ »BND ,RHOZ .DTOUMP .VSCALE ,XPl , IMAXM , 1CR ,JSEP FAK HMU TCP EPS XP2 JMAXM JCR... ISEP 0005 0003 0000 1 0005 0000 I 000006 12 JOUO I 000002 J 0001 000054 JCR 0003 077307 JCRACK 0001 000015 JHAA uoji 000017 JMAXM 0030 1 OOOOOS JP...OTOUMP 000’ OYP OOOM I FB 0003 FT OOOM I GOT OOOM 1EDJT 0000 1 IMAS OOOM ISEP ooos JMAX OOOM KMAX ooos NOUMP OOOM PART 0005 REV 0003 SMALL

  15. Environmental Assessment: Space Innovation and Development Center Schriever AFB, Colorado

    Science.gov (United States)

    2006-03-01

    coloradensis T Greenback cutthroat trout Oncorhynchus clarki stomias T Least tern (interior population) .A Sterna antillarum E Mexican spotted owl Strix...Haliaeetus leucocephalus T Boreal toad Bufo boreas boreas c Canada lynx Lynx canadensis T Greenback cutthroat trout Oncorhynchus clarki stomias T Least...T CUSTER Bald eagle IIaliaeetus leucocephalus T Canada lynx Lynx canadensis T Greenback cutthroat trout Oncorhynchus clarki stomias T Mexican

  16. Detection of Sarcocystis spp. infection in bobcats (Lynx rufus)

    Science.gov (United States)

    Verma, S. K.; Calero-Bernal, R.; Lovallo, M. J.; Sweeny, A. R.; Grigg, M. E.; Dubey, J. P.

    2015-01-01

    The protozoan Sarcocystis neurona is an important cause of severe clinical disease of horses (called equine protozoal myeloencephalitis, EPM), marine mammals, companion animals, and several species of wildlife animals in the Americas. The Virginia opossum (Didelphis virginiana) is its definitive host in the USA and other animals act as intermediate or aberrant hosts. Samples of tongue and heart from 35 bobcats hunted for fur and food from Mississippi State, USA in February, 2014 were used for the present study. Muscles were examined for Sarcocystis infection by microscopic examination of either unfixed muscle squash preparations or pepsin digests, by histopathology of fixed samples, and by molecular methods. Sarcocystis-like bradyzoites were found in digests of 14 hearts and 10 tongues of 35 bobcats. In histological sections, sarcocysts were found in 26 of 35 bobcats; all appeared relatively thin-walled similar to S. felis sarcocysts under light microscope at 1000x magnification. S. neurona-like sarcocysts having thickened villar tips were seen in unstained muscle squash of tongue of two bobcats and PCR-DNA sequencing identified them definitively as S. neurona-like parasite. DNA extracted from bradyzoites obtained from tongue and heart muscle digests was analyzed by PCR-DNA sequencing at the ITS1 locus. Results indicated the presence of S. neurona-like parasite in 26 of 35 samples. ITS1 sequences identical to S. dayspi were identified in 3 bobcats, 2 of which were also co-infected with S. neurona-like parasite. The high prevalence of sarcocysts in bobcat tissues suggested an efficient sylvatic cycle of Sarcocystis spp. in the remote regions of Mississippi State with the bobcat as a relevant intermediate host. PMID:26138150

  17. Use of non-invasive genetics to generate core-area population estimates of a threatened predator in the Superior National Forest, USA

    Science.gov (United States)

    Barber-Meyer, Shannon; Ryan, Daniel; Grosshuesch, David; Catton, Timothy; Malick-Wahls, Sarah

    2018-01-01

    Canada lynx (Lynx canadensis) are found in boreal forests of Canada and Alaska and range southward into the contiguous United States. Much less is understood about lynx in their southern range compared to northern populations. Because lynx are currently listed as threatened under the US Endangered Species Act but have recently been recommended for delisting, information on their southern populations is important for lynx recovery, conservation, and management. We used non-invasive, genetic data collected during lynx snowtracking surveys from 2012-2017 to generate core-area estimates of abundance, trend and density in selected core areas of the Superior National Forest of Minnesota, USA. Lynx abundance estimates averaged 41.8 (SD=14.7, range=24-67) during 2012-2017 in the smaller

  18. Environmental Impact Analysis Process. Draft Environmental Impact Statement Proposed Alaskan Radar System Over-the-Horizon Backscatter Radar Program

    Science.gov (United States)

    1986-08-01

    Mustela vison wolverine Gulo Kulo river otter Lutra canadensis lynx Lynx canadensis moose Alces alces caribou Rangifer tarandus Dall’s sheep Ovic dalli...tissue respiratory chain function at a power density of 5 mW/cm2 . It is unlikely that such effects would be detectable at the power densities at ground...Vulves vulpes black bear Ursus americanus grizzly bear Ursus arctos marten Martes americana ermine Mustela erminea least weasel Mustela nivalis mink

  19. Linking movement behavior and fine-scale genetic structure to model landscape connectivity for bobcats (Lynx rufus)

    Science.gov (United States)

    Dawn M. Reding; Samuel A. Cushman; Todd E. Gosselink; William R. Clark

    2013-01-01

    Spatial heterogeneity can constrain the movement of individuals and consequently genes across a landscape, influencing demographic and genetic processes. In this study, we linked information on landscape composition, movement behavior, and genetic differentiation to gain a mechanistic understanding of how spatial heterogeneity may influence movement and gene flow of...

  20. Molecular evidence of shared hookworm Ancylostoma tubaeforme haplotypes between the critically endangered Iberian lynx and sympatric domestic cats

    Czech Academy of Sciences Publication Activity Database

    Millán, J.; Blasco-Costa, Maria Isabel

    2012-01-01

    Roč. 186, 3-4 (2012), s. 518-522 ISSN 0304-4017 Institutional support: RVO:60077344 Keywords : Ancylostomiasis * Hookworm * Reservoir * Spain Subject RIV: EB - Genetics ; Molecular Biology Impact factor: 2.381, year: 2012 http://www.sciencedirect.com/science/article/pii/S030440171100759X#

  1. NMR Structure and Action on Nicotinic Acetylcholine Receptors of Water-soluble Domain of Human LYNX1

    Czech Academy of Sciences Publication Activity Database

    Lyukmanova, E. N.; Shenkarev, Z. O.; Shulepko, M. A.; Mineev, K. S.; D´Hoedt, D.; Kasheverov, I. E.; Filkin, S. Yu.; Krivolapova, A. P.; Janíčková, Helena; Doležal, Vladimír; Dolgikh, D. A.; Arseniev, A. S.; Bertrand, D.; Tsetlin, V.I.; Kirpichnikov, M. P.

    2011-01-01

    Roč. 286, č. 12 (2011), s. 10618-10627 ISSN 0021-9258 R&D Projects: GA ČR(CZ) GA305/09/0681 Institutional research plan: CEZ:AV0Z50110509 Keywords : NMR structure * nicotinic acetylcholine receptor * water-soluble domain Subject RIV: FH - Neurology Impact factor: 4.773, year: 2011

  2. Secreted Isoform of Human Lynx1 (SLURP-2): Spatial Structure and Pharmacology of Interactions with Different Types of Acetylcholine Receptors

    Czech Academy of Sciences Publication Activity Database

    Lyukmanova, E. N.; Shulepko, M. A.; Shenkarev, Z. O.; Bychkov, M. L.; Paramonov, A. S.; Chugunov, A. O.; Kulbatskii, D. S.; Arvaniti, M.; Dolejší, Eva; Schaer, T.; Arseniev, A. S.; Efremov, R. G.; Thomsen, M. S.; Doležal, Vladimír; Bertrand, D.; Dolgikh, D. A.; Kirpichnikov, M. P.

    2016-01-01

    Roč. 6, Aug 3 (2016), s. 30698 ISSN 2045-2322 R&D Projects: GA ČR(CZ) GA14-05696S Institutional support: RVO:67985823 Keywords : ion channel * signalling * molecular modelling * protein–protein interaction networks * solution-state NMR Subject RIV: ED - Physiology Impact factor: 4.259, year: 2016

  3. DNA analysis of hair and scat collected along snow tracks to document the presence of Canada Lynx.

    Science.gov (United States)

    Kevin S. McKelvey; Jeffrey von Kienast; Keith B. Aubry; Gary M. Koehler; Bejamin T. Maletzke; John R. Squires; Edward L. Lindquist; Steve Loch; Michael K. Schwartz

    2006-01-01

    Snow tracking is often used to inventory carnivore communities, but species identification using this method can produce ambiguous and misleading results. DNA can be extracted from hair and scat samples collected from tracks made in snow. Using DNA analysis could allow positive track identification across a broad range of snow conditions, thus increasing survey...

  4. Toward a defensible lynx conservation strategy: A framework for planning in the face of uncertainty [Chapter 1

    Science.gov (United States)

    Leonard F. Ruggiero; Kevin S. McKelvey

    2000-01-01

    On April 2, 1993, the incumbent U.S. President traveled to Portland, Oregon, to intervene in a national political crisis engendered by public concern over the conservation of native wildlife on public lands. Environmentalists had successfully used existing statutes, most notably the National Forest Management Act and pursuant regulations, to shut down timber industry...

  5. Conservation of lynx in the United States: A systematic approach to closing critical knowledge gaps [Chapter 17

    Science.gov (United States)

    Keith B. Aubry; Leonard F. Ruggiero; John R. Squires; Kevin S. McKelvey; Gary M. Koehler; Steven W. Buskirk; Charles J. Krebs

    2000-01-01

    Large-scale ecological studies and assessments are often implemented only after the focus of study generates substantial social, political, or legal pressure to take action (e.g., Thomas et al. 1990; Ruggiero et al. 1991; FEMAT 1993). In such a funding environment, the coordinated planning of research may suffer as the pressure to produce results escalates. To avoid...

  6. Intraspecific variation in Tsuga canadensis foliar chemistry

    Science.gov (United States)

    Laura Ingwell; Joseph Brady; Matthew Fitzpatrick; Brian Maynard; Richard Casagrande; Evan Preisser

    2009-01-01

    Three groups of eastern hemlock (Tsuga canadensis Carr.) trees were analyzed to compare their chemical composition and the potential for naturally occurring resistance to hemlock woolly adelgid (Adelges tsguae...

  7. Leaf area prediction models for Tsuga canadensis in Maine

    Science.gov (United States)

    Laura S. Kenefic; R.S. Seymour

    1999-01-01

    Tsuga canadensis (L.) Carr. (eastern hemlock) is a common species throughout the Acadian forest. Studies of leaf area and growth efficiency in this forest type have been limited by the lack of equations to predict leaf area of this species. We found that sapwood area was an effective leaf area surrogate in T. canadensis, though...

  8. epi-Cubebanes from Solidago canadensis.

    Science.gov (United States)

    Kasali, Adeleke A; Ekundayo, Olusegun; Paul, Claudia; König, Wilfried A

    2002-04-01

    GC-MS of the essential oil prepared by hydrodistillation of the green parts of a specimen of Solidago canadensis collected near Katowice, Poland, revealed two new sesquiterpene hydrocarbons. Their EI mass spectra resembled the mass spectrum of beta-ylangene (1) but the retention indices of the new compounds differed markedly from this known compound. After isolation of the new compounds by preparative GC their investigation by one- and two-dimensional NMR techniques resulted in the identification of 6-epi-alpha-cubebene (2) (minor constituent, 1.5%) and 6-epi-beta-cubebene (3) (major constituent, 20.5%).

  9. Nalaz tombusvirusa na vrsti Erigeron canadensis L.

    OpenAIRE

    Jeknić, Zoran; Erić, Živojin; Grbelja, Julijana

    1988-01-01

    Iz listova zaraženih primjeraka korovne biljke Erigeron canadensis L. koji su rasli na nekoliko lokaliteta u Sarajevu izoliran je virus iz skupine tombusvirusi. Identifikacija virusa izvršena je na osnovi reakcije pokusnih biljaka, analize ultratankih presjeka kroz zaraženo tkivo, morfologije i veličine virusnih čestica, te na osnovi seroloških reakcija metodom dvostruke imunodifuzije u agarskom gelu i čvrsto fazne imunoelektronske mikroskopije (SPIEM). U serološkim pokusima upotrijebljen je ...

  10. The influence of snowmobile trails on coyote movements during winter in high-elevation landscapes.

    Directory of Open Access Journals (Sweden)

    Eric M Gese

    Full Text Available Competition between sympatric carnivores has long been of interest to ecologists. Increased understanding of these interactions can be useful for conservation planning. Increased snowmobile traffic on public lands and in habitats used by Canada lynx (Lynx canadensis remains controversial due to the concern of coyote (Canis latrans use of snowmobile trails and potential competition with lynx. Determining the variables influencing coyote use of snowmobile trails has been a priority for managers attempting to conserve lynx and their critical habitat. During 2 winters in northwest Wyoming, we backtracked coyotes for 265 km to determine how varying snow characteristics influenced coyote movements; 278 km of random backtracking was conducted simultaneously for comparison. Despite deep snow (>1 m deep, radio-collared coyotes persisted at high elevations (>2,500 m year-round. All coyotes used snowmobile trails for some portion of their travel. Coyotes used snowmobile trails for 35% of their travel distance (random: 13% for a mean distance of 149 m (random: 59 m. Coyote use of snowmobile trails increased as snow depth and penetrability off trails increased. Essentially, snow characteristics were most influential on how much time coyotes spent on snowmobile trails. In the early months of winter, snow depth was low, yet the snow column remained dry and the coyotes traveled off trails. As winter progressed and snow depth increased and snow penetrability increased, coyotes spent more travel distance on snowmobile trails. As spring approached, the snow depth remained high but penetrability decreased, hence coyotes traveled less on snowmobile trails because the snow column off trail was more supportive. Additionally, coyotes traveled closer to snowmobile trails than randomly expected and selected shallower snow when traveling off trails. Coyotes also preferred using snowmobile trails to access ungulate kills. Snow compaction from winter recreation influenced

  11. The influence of snowmobile trails on coyote movements during winter in high-elevation landscapes.

    Science.gov (United States)

    Gese, Eric M; Dowd, Jennifer L B; Aubry, Lise M

    2013-01-01

    Competition between sympatric carnivores has long been of interest to ecologists. Increased understanding of these interactions can be useful for conservation planning. Increased snowmobile traffic on public lands and in habitats used by Canada lynx (Lynx canadensis) remains controversial due to the concern of coyote (Canis latrans) use of snowmobile trails and potential competition with lynx. Determining the variables influencing coyote use of snowmobile trails has been a priority for managers attempting to conserve lynx and their critical habitat. During 2 winters in northwest Wyoming, we backtracked coyotes for 265 km to determine how varying snow characteristics influenced coyote movements; 278 km of random backtracking was conducted simultaneously for comparison. Despite deep snow (>1 m deep), radio-collared coyotes persisted at high elevations (>2,500 m) year-round. All coyotes used snowmobile trails for some portion of their travel. Coyotes used snowmobile trails for 35% of their travel distance (random: 13%) for a mean distance of 149 m (random: 59 m). Coyote use of snowmobile trails increased as snow depth and penetrability off trails increased. Essentially, snow characteristics were most influential on how much time coyotes spent on snowmobile trails. In the early months of winter, snow depth was low, yet the snow column remained dry and the coyotes traveled off trails. As winter progressed and snow depth increased and snow penetrability increased, coyotes spent more travel distance on snowmobile trails. As spring approached, the snow depth remained high but penetrability decreased, hence coyotes traveled less on snowmobile trails because the snow column off trail was more supportive. Additionally, coyotes traveled closer to snowmobile trails than randomly expected and selected shallower snow when traveling off trails. Coyotes also preferred using snowmobile trails to access ungulate kills. Snow compaction from winter recreation influenced coyote

  12. Dissecting Solidago canadensis-soil feedback in its real invasion.

    Science.gov (United States)

    Dong, Li-Jia; Yang, Jian-Xia; Yu, Hong-Wei; He, Wei-Ming

    2017-04-01

    The importance of plant-soil feedback (PSF) has long been recognized, but the current knowledge on PSF patterns and the related mechanisms mainly stems from laboratory experiments. We aimed at addressing PSF effects on community performance and their determinants using an invasive forb Solidago canadensis . To do so, we surveyed 81 pairs of invaded versus uninvaded plots, collected soil samples from these pairwise plots, and performed an experiment with microcosm plant communities. The magnitudes of conditioning soil abiotic properties and soil biotic properties by S. canadensis were similar, but the direction was opposite; altered abiotic and biotic properties influenced the production of subsequent S. canadensis communities and its abundance similarly. These processes shaped neutral S. canadensis -soil feedback effects at the community level. Additionally, the relative dominance of S. canadensis increased with its ability of competitive suppression in the absence and presence of S. canadensis -soil feedbacks, and S. canadensis -induced decreases in native plant species did not alter soil properties directly. These findings provide a basis for understanding PSF effects and the related mechanisms in the field conditions and also highlight the importance of considering PSFs holistically.

  13. Description of the lynx spiders of a canopy fogging project in northern Borneo (Araneae: Oxyopidae), with description of a new genus and six new species of Hamataliwa

    NARCIS (Netherlands)

    Deeleman - Reinhold, C.L.

    2009-01-01

    All oxyopid spider species collected in a long-term ecological canopy project in northern Borneo are described. A total of nine species in three genera could be established, one of which belongs to a new genus. Four species could be assigned to known species, five are described as new species in the

  14. Epizootic and zoonotic helminths of the bobcat (Lynx rufus in Illinois and a comparison of its helminth component communities across the American Midwest

    Directory of Open Access Journals (Sweden)

    Hiestand Shelby J.

    2014-01-01

    Full Text Available A total of 6257 helminths of 19 taxa were recovered from the digestive tract and lungs of 67 bobcats in Illinois. Infections caused by Alaria mustelae, Diphyllobothrium latum, and Macracanthorhynchus ingens are reported for the first time in bobcats. From all the taxa recovered, only three species occurred in high prevalence and caused intense infections: Taenia rileyi, Alaria marcianae, and Toxocara cati, with prevalence and mean intensity of 70% and 6; 42% and 193, and 25% and 14 individuals, respectively. Prevalence lower than 15% of 14 helminth species suggests bobcats are not continuously exposed to infective stages of a single parasite, and may be exposed to a large variety of generalists during their lifespan. No significant difference in parasite species according to host sex or age was detected, except for Diphyllobothrium spp., which were found more frequently in females and in trapped bobcats, and the hookworm, Ancylostoma caninum, which infected juveniles more frequently. Average species richness per infracommunity was 2.4 (±1.2, and the parasite component community showed low qualitative similarity with neighbor communities. The taxa A. caninum, Alaria spp., Diphyllobothrium spp., Paragonimus kellicotti, and T. cati are etiological agents of epizootic and zoonotic diseases.

  15. Four major saponins from Solidago canadensis.

    Science.gov (United States)

    Reznicek, G; Jurenitsch, J; Plasun, M; Korhammer, S; Haslinger, E; Hiller, K; Kubelka, W

    1991-01-01

    Four new bisdesmosidic saponins each containing eight carbohydrate units were isolated from Solidago canadensis. GC, GC-MS, FABMS analysis and mainly the use of 2D NMR techniques allowed their identification as bayogeninglycosides (canadensissaponins 1-4) 3-O- [beta-D-glucopyranosyl-(1----3)-beta-D-glucopyranosyl]-28-O-[alpha-L- rhamnopyranosyl-(1----3)-beta-D-xylopyranosyl-(1----4)-[beta-D- xylopyranosyl-(1----3)]-alpha-L-rhamnopyranosyl-(1----2)-[beta-D- apio-D-furanosyl-(1----3)]-beta-D-6-deoxyglucopyranosyl- (1----]-bayogenin; -(1----2)-[beta-D-apio-D-furanosyl-(1----3)]-ara- binopyranosyl-(1----]-bayogenin; -[alpha-L-rhamnopyranosyl-(1----3)]-beta- D-6-deoxyglucopyranosyl-(1----]-bayogenin and - [alpha-L-rhamnopyranosyl- (1----3)]-arabinopyranosyl-(1----]-bayogenin.

  16. New labdane diterpenes from Solidago canadensis.

    Science.gov (United States)

    Wangensteen, Helle; Phan, Thi T; Rise, Frode; Halvorsen, Trine G; Malterud, Karl E

    2012-01-01

    The ethanol extract of roots of Solidago canadensis yielded eight labdane-type diterpenes. Five of those were new natural compounds (9,13,15,16-bisepoxy-labdane-7-ene-6,15-dione (3a), 13-epi-9,13,15,16-bisepoxy-labdane-7-ene-6,15-dione (3b), 15,16-epoxy-labdane-7,13-diene-6,16-dione (5), 15-ethoxy-9,13,15,16-bisepoxy-labdane-7-ene-6-one (6a) and 13-epi-15-ethoxy-9,13,15,16-bisepoxy-labdane-7-ene-6-one (6b). The known labdane diterpenes deoxysolidagenone (1), solidagenone (2) and 15,16-epoxy-labdane-7,13-diene-6,15-dione (4) were also isolated. Chemical structures were determined using 1D and 2D NMR techniques and MS analysis.

  17. Echinococcus canadensis transmission in the North.

    Science.gov (United States)

    Oksanen, Antti; Lavikainen, Antti

    2015-10-30

    The Echinococcus granulosus complex (EG) is the causative agent of cystic echinococcosis (CE). Northern cervid Echinococcus was previously suggested to be the ancestor of the entire EG. During the last century, it was regarded to have three (or four) different, but often overlapping, transmission cycles in the circumpolar North: the original wolf-wild cervid (reindeer or elk)-cycle; the semi-synanthropic cycle involving sled and hunting dogs and wild cervids; and the synanthropic cycle involving herding dogs and semi-domesticated reindeer. Human infections mainly derived from the latter two cycles. In Fennoscandia, the synanthropic cycle has been eliminated during the last 50 years due to changes in reindeer husbandry methods; machinery making herding dogs largely redundant. Typical to human CE in the North has been the relatively benign nature of the disease compared with CE caused by E. granulosus sensu stricto. The metacestodes in humans and in the natural cervid hosts predominantly appear in the lungs. The causative agents have been identified as EG mitochondrial genotypes G8 and G10, now together with G6 (camel), G7 (pig) and G9 genotypes constituting the Echinococcus canadensis species. Based on recent findings in reindeer in Yakutia, G6 might also be recognised among cervid genotypes. The geographical distribution of both G8 and G10 is circumpolar, with G10 currently apparently more prevalent both in the Palearctic and Nearctic. Because of the disappearance of the working dog, E. canadensis in Fennoscandia is again highly dependent on the wolf, as it was before domestication of the dog. Pet and sled dogs, if their number further increases, may to a minor part participate in the life cycle. Human CE in the North was mostly diagnosed by mass chest tuberculosis radiography campaigns, which have been discontinued. Copyright © 2015 Elsevier B.V. All rights reserved.

  18. First confirmed record of Elodea canadensis Michx. (Hydrocharitaceae in Greece

    Directory of Open Access Journals (Sweden)

    Poulis Georgios

    2017-12-01

    Full Text Available The paper confirms the presence of Elodea canadensis Michx. in Greece and outlines the history of contradictory relevant reports. This is also the first report of the species′ presence in the transboundary lake Great Prespa.

  19. Antimicrobial fungal endophytes from the botanical medicine goldenseal (Hydrastis canadensis).

    Science.gov (United States)

    Egan, Joseph M; Kaur, Amninder; Raja, Huzefa A; Kellogg, Joshua J; Oberlies, Nicholas H; Cech, Nadja B

    2016-09-01

    The potential of fungal endophytes to alter or contribute to plant chemistry and biology has been the topic of a great deal of recent interest. For plants that are used medicinally, it has been proposed that endophytes might play an important role in biological activity. With this study, we sought to identify antimicrobial fungal endophytes from the medicinal plant goldenseal ( Hydrastis canadensis L., Ranunculaceae), a plant used in traditional medicine to treat infection. A total of 23 fungal cultures were obtained from surface-sterilized samples of H. canadensis roots, leaves and seeds. Eleven secondary metabolites were isolated from these fungal endophytes, five of which had reported antimicrobial activity. Hydrastis canadensis plant material was then analyzed for the presence of fungal metabolites using liquid chromatography coupled to high resolving power mass spectrometry. The antimicrobial compound alternariol monomethyl ether was detected both as a metabolite of the fungal endophyte Alternaria spp. isolated from H. canadensis seeds, and as a component of an extract from the H. canadensis seed material. Notably, fungi of the Alternaria genus were isolated from three separate accessions of H. canadensis plant material collected in a time period spanning 5 years. The concentration of alternariol monomethyl ether (991 mg/kg in dry seed material) was in a similar range to that previously reported for metabolites of ecologically important fungal endophytes. The seed extracts themselves, however, did not possess antimicrobial activity.

  20. Solidago canadensis und Solidago gigantea in Frankfurt am Main

    OpenAIRE

    Ottich, Indra

    2015-01-01

    Die beiden nordamerikanischen Goldruten-Arten Solidago canadensis und S. gigantea sind in Mitteleuropa weit verbreitet. Häufig wird nicht zwischen den beiden Arten unterschieden, die Angaben zur Ökologie scheinen für beide Arten weitgehend identisch. Durch eine Rasterkartierung des Stadtgebietes von Frankfurt am Main wird gezeigt, dass die Arten jedoch unterschiedliche Ansprüche haben. Während Solidago canadensis sehr häufig ist und alle typisch städtischen Bereiche besiedelt, wird Solidago g...

  1. Copper toxicity in leaves of Elodea canadensis Michx.

    Science.gov (United States)

    Malec, Przemysław; Maleva, Maria; Prasad, M N V; Strzałka, Kazimierz

    2009-05-01

    Elodea canadensis (Canadian waterweed) has an ability to accumulate and bioconcentrate heavy metals. In this work, selected cellular responses for Cu treatment were studied in leaves of E. canadensis. Short term experiments, i.e. 1 week exposure to 0.5, 1, 5, and 10 microM of Cu indicated that concentrations up to 10 microM Cu causes a pronounced accumulation of photosynthetic pigments, a drastic degradation of soluble proteins with molecular weight above 18 kDa and a rapid accumulation of polypeptides with molecular weight below 14 kDa. The connection of these observations with copper detoxification mechanisms in aquatic macrophytes are discussed.

  2. Výskyt velkých šelem – rysa ostrovida (Lynx lynx), vlka obecného (Canis lupus) a medvěda hnědého (Ursus arctos) – a kočky divoké (Felis silvestris)\

    Czech Academy of Sciences Publication Activity Database

    Kutal, M.; Belotti, E.; Volfová, J.; Mináriková, T.; Bufka, L.; Poledník, L.; Krojerová, Jarmila; Bojda, M.; Váňa, M.; Kutalová, L.; Beneš, J.; Flousek, J.; Tomášek, V.; Kafka, P.; Poledníková, K.; Pospíšková, J.; Dekař, P.; Machciník, B.; Koubek, Petr; Duľa, M.

    2017-01-01

    Roč. 48, č. 48 (2017), s. 93-107 ISSN 0024-7774 Institutional support: RVO:68081766 Keywords : Large carnivores * species distribution * Central Europe * trans-boundary populations Subject RIV: EH - Ecology, Behaviour OBOR OECD: Ecology

  3. Usability of large carnivore as a keystone species in Eastern Black ...

    African Journals Online (AJOL)

    The aim of the study was to investigate the keystone species property of Brown bear (Ursus arctos), Wolf (Canis lupus) and Eurasian lynx (Lynx lynx). The main selecting criteria for keystone species can be summarized as top predator or large carnivore important prey species or provide key resources and species having ...

  4. ENS Implementation - Part of the PSO Eltra contract 4524/2003

    DEFF Research Database (Denmark)

    Teodorescu, Remus; Blaabjerg, Frede; Asiminoaei, Lucian

    with PowerLynx A/S for the development of the ENS function for the PowerLynx PV inverters. The work started 01.01.03 and ended 29.02.04 and involved Frede Blaabjerg, Remus Teodorescu, Lucian Asiminoaei and Adrian Timbus from Aalborg University and Uffe Borup from PowerLynx A/S. The objective was ...

  5. A new labdane diterpene from the flowers of Solidago canadensis.

    Science.gov (United States)

    Bradette-Hébert, Marie-Eve; Legault, Jean; Lavoie, Serge; Pichette, André

    2008-01-01

    A new labdane diterpene, 9alpha,16xi-dihydroxy-6-oxo-7,13-labdadien-15,16-olide (solicanolide, 1) and six known compounds identified as quercetin (2), 3-O-caffeoylquinic acid (3, neochlorogenic acid), 5-O-caffeoylquinic acid (4, chlorogenic acid), 4,5-di-O-caffeoylquinic acid (5), 3,5-di-O-caffeoylquinic acid (6) and 3,4-di-O-caffeoylquinic acid (7) were isolated from the flowers of Solidago canadensis. To our knowledge, compound 7 was isolated for the first time in S. canadensis. This work describes the isolation of compounds 1-7 and the structure elucidation of a new compound identified as compound 1. Solicanolide (1) showed cytotoxic activity against A549 (IC(50): 13+/-2 microM), DLD-1 (IC(50): 26+/-2 microM) and WS1 (IC(50): 17+/-1 microM) cell lines.

  6. Effect of lead toxicity on aquatic macrophyte Elodea canadensis Michx.

    Science.gov (United States)

    Dogan, Muhittin; Saygideger, Saadet Demirors; Colak, Ugur

    2009-08-01

    Effects of Pb accumulation on the contents of chlorophylls (a and b), carotenoid, ascorbic acid (AsA), non-protein SH groups and protein were investigated in aquatic macrophyte Elodea canadensis. Pb accumulation in E. canadensis tissues increased with increasing metal concentrations. The increases at 1, 10 and 100 mg/L Pb are about 12.0, 44.6 and 71.1 times greater than control, respectively. Contents of chlorophylls, carotenoid and protein were adversely affected by Pb accumulation. Induction of non-protein SH groups and AsA showed that Pb accumulation caused oxidative stress. It is also possible that increased non-protein SH groups by Pb accumulation may be due to their role in Pb detoxification.

  7. Batch study of uranium biosorption by Elodea canadensis biomass

    International Nuclear Information System (INIS)

    Zheng-ji Yi; University of Science and Technology Beijing, Haidian District, Beijing; Jun Yao; Chinese University of Geosciences, Beijing; Mi-jia Zhu; Hui-lun Chen; Fei Wang; Zhi-min Yuan; Xing Liu

    2016-01-01

    The adsorption of U(VI) onto Elodea canadensis was studied via a batch equilibrium method. Kinetic investigation indicated that the U(VI) adsorption by E. canadensis reached an equilibrium in 120 min and followed pseudo-second-order kinetics. The solution pH was the most important parameter controlling adsorption of U(VI) and the optimum pH for U(VI) removal is 6.0. The U(VI) biosorption can be well described by Langmuir model. IR spectrum analysis revealed that -NH 2 , -OH, C=O and C-O could bind strongly with U(VI). XPS spectrum analysis implied that ion exchange and coordination mechanism could be involved in the U(VI) biosorption process. (author)

  8. Isolation and antifungal screening of endophytic fungi from Erigeron canadensis

    Directory of Open Access Journals (Sweden)

    Xuelian Bai

    2017-07-01

    Full Text Available Sixteen fungal strains isolated from the Erigeron canadensis, one of traditional Chinese medicines used to treat the pathogenic infection and dysentery, were evaluated for their antifungal activities against one human pathogen Candida albicans, and two phytopathogens, Colletotrichum fructicola and Rhizoctonia cerealis. The bioassay results indicated that the ethyl acetate extract of the fermentation broth of these fungal endophytes had stronger antimicrobial activities. Among these endophytic strains, the ethyl acetate extracts of strains NPR003 and NPR005 showed the strongest inhibitory effects and has potential application in the discovery of new antifungal agents. This was the first report on the isolation of endophytic fungi from E. canadensis and evaluation of their antifungal activities.

  9. Cellular proton dynamics in Elodea canadensis leaves induced by cadmium.

    Science.gov (United States)

    Tariq Javed, M; Lindberg, Sylvia; Greger, Maria

    2014-04-01

    Our earlier investigations showed that Elodea canadensis shoots, grown in the presence of cadmium (Cd), caused basification of the surrounding medium. The present study was aimed to examine the proton dynamics of the apoplastic, cytosolic and vacuolar regions of E. canadensis leaves upon Cd exposure and to establish possible linkage between cellular pH changes and the medium basification. The changes in cytosolic calcium [Ca(2+)]cyt was also investigated as the [Ca(2+)]cyt and [pH]cyt homeostasis are closely linked. The cellular H(+) and Ca(2+) concentrations were monitored by fluorescence microscopy and ion-specific fluorescent dyes. Cadmium concentration of leaf-cell walls was measured after plant cultivation at different fixed levels of starting pH. The protoplasts from E. canadensis leaves were isolated by use of a newly developed enzymatic method. Upon Cd addition, both cytosolic and vacuolar pH of leaf protoplasts increased with a concomitant rise in the cytosolic Ca(2+) concentration. Time course studies revealed that changes in [Ca(2+)]cyt and [pH]cyt followed similar dynamics. Cadmium (0.5 μM) exposure decreased the apoplastic pH by 0.85 units. The maximum cell wall bound Cd-contents were obtained in plants grown at low starting pH. It is concluded that Cd treatment causes apoplastic acidosis in E. canadensis leaves associated with enhanced Cd binding to the cell walls and, consequently, reduced Cd influx into the cytosol. Copyright © 2014 Elsevier Masson SAS. All rights reserved.

  10. [Allelopathic effects of invasive weed Solidago canadensis on native plants].

    Science.gov (United States)

    Mei, Lingxiao; Chen, Xin; Tang, Jianjun

    2005-12-01

    With growth chamber method, this paper studied the allelopathic potential of invasive weed Solidago canadensis on native plant species. Different concentration S. canadensis root and rhizome extracts were examined, and the test plants were Trifolium repens, Trifolium pretense, Medicago lupulina, Lolium perenne, Suaeda glauca, Plantago virginica, Kummerowia stipulacea, Festuca arundinacea, Ageratum conyzoides, Portulaca oleracea, and Amaranthus spinosus. The results showed that the allelopathic inhibitory effect of the extracts from both S. canadensis root and rhizome was enhanced with increasing concentration, and rhizome extracts had a higher effect than root extracts. At the lowest concentration (1:60), root extract had little effect on the seed germination and seedling growth of T. repens, but rhizome extract could inhibit the germination of all test plants though the inhibitory effect varied with different species. The inhibition was the greatest for grass, followed by forb and legume. 1:60 (m:m) rhizome extract had similar effects on seed germination and radicel growth, but for outgrowth, the extract could inhibit Kummerowia stipulacea, Amaranthus spinosus and Festuca arundinacea, had no significant impact on Lolium perenne, Plantago virginica, Ageratum conyzoides, Portulaca oleracea and Amaranthus spinosus, and stimulated Trifolium repens, Trifolium pretense and Medicago lupulina.

  11. Echinococcus multilocularis and Echinococcus canadensis in wolves from western Canada.

    Science.gov (United States)

    Schurer, Janna M; Gesy, Karen M; Elkin, Brett T; Jenkins, Emily J

    2014-02-01

    Echinococcus species are important parasites of wildlife, domestic animals and people worldwide; however, little is known about the prevalence, intensity and genetic diversity of Echinococcus tapeworms in Canadian wildlife. Echinococcus tapeworms were harvested from the intestines of 42% of 93 wolves (Canis lupus) from five sampling regions in the Northwest Territories, Manitoba and Saskatchewan, and visually identified to genus level by microscopic examination. Genetic characterization was successful for tapeworms from 30 wolves, and identified both Echinococcus canadensis and Echinococcus multilocularis in all sampling locations. Mixed infections of E. canadensis/E. multilocularis, as well as the G8/G10 genotypes of E. canadensis were observed. These findings suggest that wolves may be an important definitive host for both parasite species in western Canada. This represents the first report of wolves naturally infected with E. multilocularis in North America, and of wolves harbouring mixed infections with multiple species and genotypes of Echinococcus. These observations provide important information regarding the distribution and diversity of zoonotic species of Echinococcus in western North America, and may be of interest from public health and wildlife conservation perspectives.

  12. Characterization and biological activity of Solidago canadensis complex.

    Science.gov (United States)

    Šutovská, M; Capek, P; Kocmálová, M; Fraňová, S; Pawlaczyk, I; Gancarz, R

    2013-01-01

    Polyphenolic-polysaccharide-protein complex has been isolated from flowers of Solidago canadensis L. by hot alkaline extraction procedure. Compositional analyses of S canadensis complex revealed the presence of carbohydrates (43 wt%), protein (27 wt%), phenolics (12 wt%), uronic acids (10 wt%) and inorganic material (8 wt%). The carbohydrate part was rich in neutral sugars (81 wt%) while uronids were determined in lower amount (19 wt%). Monosaccharide analysis of carbohydrate part revealed the presence of five main sugar components, i.e. rhamnose (~23 wt%), arabinose (~20 wt%), uronic acids (~19 wt%), galactose (~17 wt%) and glucose (~14 wt%), and indicated thus the presence of rhamnogalacturonan and arabinogalactan in S. canadensis complex. HPLC analysis of complex showed one single peak of molecule mass at 11.2 kDa. Antitussive activity tests, performed in three doses of Solidago complex, showed the reduction of the number of cough efforts in the dose-dependent manner. Higher doses (50 and 75 mg/kg b.w.) were shown to be by 15 and 20% more effective than that of lower one (25mg/kg b.w.). However, the antitussive effect of the highest dose (75 mg/kg b.w.) was by 10% lower in comparison with that of codeine, the strongest antitussive agent. Besides, the highest dose of the complex (75 mg/kg b.w.) significantly decreased values of specific airways resistance and their effect remained longer as that of salbutamol, a representative of classic antiasthmatic drugs. Copyright © 2012 Elsevier B.V. All rights reserved.

  13. Sanguinaria canadensis: Traditional Medicine, Phytochemical Composition, Biological Activities and Current Uses

    Directory of Open Access Journals (Sweden)

    Andrew Croaker

    2016-08-01

    Full Text Available Sanguinaria canadensis, also known as bloodroot, is a traditional medicine used by Native Americans to treat a diverse range of clinical conditions. The plants rhizome contains several alkaloids that individually target multiple molecular processes. These bioactive compounds, mechanistically correlate with the plant’s history of ethnobotanical use. Despite their identification over 50 years ago, the alkaloids of S. canadensis have not been developed into successful therapeutic agents. Instead, they have been associated with clinical toxicities ranging from mouthwash induced leukoplakia to cancer salve necrosis and treatment failure. This review explores the historical use of S. canadensis, the molecular actions of the benzophenanthridine and protopin alkaloids it contains, and explores natural alkaloid variation as a possible rationale for the inconsistent efficacy and toxicities encountered by S. canadensis therapies. Current veterinary and medicinal uses of the plant are studied with an assessment of obstacles to the pharmaceutical development of S. canadensis alkaloid based therapeutics.

  14. Sanguinaria canadensis: Traditional Medicine, Phytochemical Composition, Biological Activities and Current Uses.

    Science.gov (United States)

    Croaker, Andrew; King, Graham J; Pyne, John H; Anoopkumar-Dukie, Shailendra; Liu, Lei

    2016-08-27

    Sanguinaria canadensis, also known as bloodroot, is a traditional medicine used by Native Americans to treat a diverse range of clinical conditions. The plants rhizome contains several alkaloids that individually target multiple molecular processes. These bioactive compounds, mechanistically correlate with the plant's history of ethnobotanical use. Despite their identification over 50 years ago, the alkaloids of S. canadensis have not been developed into successful therapeutic agents. Instead, they have been associated with clinical toxicities ranging from mouthwash induced leukoplakia to cancer salve necrosis and treatment failure. This review explores the historical use of S. canadensis, the molecular actions of the benzophenanthridine and protopin alkaloids it contains, and explores natural alkaloid variation as a possible rationale for the inconsistent efficacy and toxicities encountered by S. canadensis therapies. Current veterinary and medicinal uses of the plant are studied with an assessment of obstacles to the pharmaceutical development of S. canadensis alkaloid based therapeutics.

  15. Neglected zoonotic helminths: Hymenolepis nana, Echinococcus canadensis and Ancylostoma ceylanicum.

    Science.gov (United States)

    Thompson, R C A

    2015-05-01

    The majority of helminth parasites that are considered by WHO to be the cause of 'neglected diseases' are zoonotic. In terms of their impact on human health, the role of animal reservoirs and polyparasitism are both emerging issues in understanding the epidemiology of a number of these zoonoses. As such, Hymenolepis (Rodentolepis) nana, Echinococcus canadensis and Ancylostoma ceylanicum all qualify for consideration. They have been neglected and there is increasing evidence that all three parasite infections deserve more attention in terms of their impact on public health as well as their control. Copyright © 2015 European Society of Clinical Microbiology and Infectious Diseases. Published by Elsevier Ltd. All rights reserved.

  16. [Allelopathic interactions between invasive plant Solidago canadensis and native plant Phragmites australis].

    Science.gov (United States)

    Li, Yu-Zhe; Fan, Jiang-Wen; Yin, Xin; Yang, En-Yi; Wei, Wei; Tian, Zhi-Hui; Da, Liang-Jun

    2011-05-01

    Taking the seeds of invasive plant Solidago canadensis and native plant Phragmites australis from their mono- and co-dominant communities as allelopathic acceptors, this paper analyzed the differences in the seed germination rate and sprout length after treated with five level (12.5, 25, 50, 100, and 200 mg x mL(-1)) S. canadensis and P. australis extracts, aimed to understand the allelopathic interactions between the two species. The 1000-grain weight and seed germination rate under distilled water treatment of the two species in co-dominated community were greater than those in mono-dominant community. Low level (12.5 and 25 mg x mL(-1)) S. canadensi extracts slightly promoted the seed germination rates of S. canadensis in both mono- and co-dominant communities, but high level (50, 100, and 200 mg x mL(-1)) S. canadensi extracts had strong inhibition effect, especially for the S. canadensis in co-dominated community. No significant patterns were observed about the effects of P. australis extract on S. canadensis seed germination. The sprout length of S. canadensis seeds in both mono- and co-dominant communities decreased with increasing level of S. canadensis extract, but decreased in a fluctuation way with increasing level of P. australis extract. After treated with the extracts of P. australis or S. canadensis, the seed germination rate of P. australis in mono-dominant community was significantly greater than that in co-dominant community (P < 0.05), but there was no significant difference between these two extracts.

  17. Seasonal dynamics of Co60 accumulation by Elodea canadensis Rich

    International Nuclear Information System (INIS)

    Bochenin, V.F.; Chebotina, M.Ya.

    1975-01-01

    The seasonal dynamics of Co 60 accumulation by one of the most widely distributed fresh-water plants, elodea (Elodea canadensis Rich), were studied. Accumulation was shown to vary with the season. A very low coefficient of accumulation (500-700 units) was typical for the summer period (June to August). It increased in the fall, reached its highest values (3500-4000) in mid-winter (January), and dropped sharply in the spring. Radioisotope concentrations in the plant varied similarly. The cumulative capacity of plants for Co 60 may vary by a factor of 6 to 7 during the year. It is suggested that the seasonal changes in Co 60 accumulation may be caused by both differences in the physiological state of the plants at different times of the year, and by seasonal variations in the hydrochemical regime of the water reservoir. Experiments were done to clarify which of these mechanisms is the determining factor. (V.A.P.)

  18. Pharmacognostic and physicochemical evaluation of homoeopathic drug: Erigeron canadensis L.

    Directory of Open Access Journals (Sweden)

    Padma Rao Pogaku

    2017-01-01

    Full Text Available Background: Erigeron canadensis L. is an erect annual herb belonging to the family Asteraceae. Aerial parts are used in Homoeopathy for bruises, cough, dysuria, gonorrhea, haemorrhages, haemorrhoids, spermatorrhea, and wounds. Objective: The pharmacognostic and physicochemical studies have been carried out to facilitate the use of correct species and lay down standards of raw drug materials. Materials and Methods: Pharmacognostic studies of the leaf and stem of authentic samples of E. canadensis L. have been carried out. Physicochemical parameters of the raw drug include extractive values, ash value, and formulation; besides weight per mL, total solids, and alcohol content, high-performance thin layer chromatography (HPTLC and ultraviolet (UV studies are given. Results: Epidermal cells often possess crystals of calcium oxalate. Stomata are anomocytic, anisocytic, and tetracytic types. Trichomes are uniseriate and conical in structure. The mid vein in transection is flat on adaxial and is ribbed toward abaxial, with a secretory cavity beneath the central vascular bundle. Stem in transection is round. The vascular tissue is made of several vascular bundles in a ring. Crystals of calcium oxalate occur in the epidermis, cortex, and pith of stem. In mature stem, secondary xylem is well developed with a reduced phloem. The determined physicochemical data, namely, extractive values, ash values, and preparation of for raw drug and weight per mL, total solids, and alcohol content besides UV and HPTLC profile for finished product are provided. Conclusions: The presented morphoanatomical features along with powder microscopic and organoleptic characters and physicochemical data are diagnostic to establish the standards for ensuring quality and purity of the drug.

  19. Gastric spiral bacteria in small felids.

    Science.gov (United States)

    Kinsel, M J; Kovarik, P; Murnane, R D

    1998-06-01

    Nine small cats, including one bobcat (Felis rufus), one Pallas cat (F. manul), one Canada lynx (F. lynx canadensis), two fishing cats (F. viverrina), two margays (F. wiedii), and two sand cats (F. margarita), necropsied between June 1995 and March 1997 had large numbers of gastric spiral bacteria, whereas five large cats, including one African lion (Panthera leo), two snow leopards (P. uncia), one Siberian tiger (P. tigris altaica), and one jaguar (P. onca), necropsied during the same period had none. All of the spiral organisms from the nine small cats were histologically and ultrastructurally similar. Histologically, the spiral bacteria were 5-14 microm long with five to nine coils per organism and were located both extracellularly within gastric glands and surface mucus, and intracellularly in parietal cells. Spiral bacteria in gastric mucosal scrapings from the Canada lynx, one fishing cat, and the two sand cats were gram negative and had corkscrewlike to tumbling motility when viewed with phase contrast microscopy. The bacteria were 0.5-0.7 microm wide, with a periodicity of 0.65-1.1 microm in all cats. Bipolar sheathed flagella were occasionally observed, and no periplasmic fibrils were seen. The bacteria were extracellular in parietal cell canaliculi and intracellular within parietal cells. Culture of mucosal scrapings from the Canada lynx and sand cats was unsuccessful. Based on morphology, motility, and cellular tropism, the bacteria were probably Helicobacter-like organisms. Although the two margays had moderate lymphoplasmacytic gastritis, the other cats lacked or had only mild gastric lymphoid infiltrates, suggesting that these organisms are either commensals or opportunistic pathogens.

  20. A new phenolic glycoside from the aerial parts of Solidago canadensis.

    Science.gov (United States)

    Zhang, JinSong; Zhang, XinQin; Lei, GuangQing; Li, Bo; Chen, JiaKuan; Zhou, TongShui

    2007-01-01

    A new phenolic glycoside, 2'-hydroxy-4',6'-di-O-beta-D-glucopyranosyl-butyrrophenone (1), was isolated from the aerial parts of Solidago canadensis. The structure was elucidated on the basis of spectroscopic methods.

  1. Effect of copper on growth of an aquatic macrophyte, Elodea canadensis

    Energy Technology Data Exchange (ETDEWEB)

    Mal, T.K.; Adorjan, Peter; Corbett, A.L

    2002-12-01

    Elodea canadensis may be a good biomonitor for copper, but not a good bioaccumulator. - Elodea canadensis has been proposed as a potential biomonitor due to its wide distribution and apparent ability to accumulate pollutants in aquatic ecosystems. We investigated the effects of copper sulfate on growth in E. canadensis to determine its effectiveness as a biomonitor of copper pollution in aquatic systems and whether growth is a suitable index of sub-lethal stress. Copper sulfate significantly slowed or stopped growth at all concentrations (low: 1 ppm, medium: 5 ppm, high: 10 ppm of copper sulfate) used. Final plant drymass was significantly lower in medium and high copper treatments compared with controls. E. canadensis appears to be very sensitive to copper levels, and may be useful as a biomonitor of copper levels in aquatic systems. However, its utility as a bioaccumulator may be limited, because we observed senescence of most leaves in all copper-treated plants following 4 weeks of treatment.

  2. Effect of copper on growth of an aquatic macrophyte, Elodea canadensis

    International Nuclear Information System (INIS)

    Mal, T.K.; Adorjan, Peter; Corbett, A.L.

    2002-01-01

    Elodea canadensis may be a good biomonitor for copper, but not a good bioaccumulator. - Elodea canadensis has been proposed as a potential biomonitor due to its wide distribution and apparent ability to accumulate pollutants in aquatic ecosystems. We investigated the effects of copper sulfate on growth in E. canadensis to determine its effectiveness as a biomonitor of copper pollution in aquatic systems and whether growth is a suitable index of sub-lethal stress. Copper sulfate significantly slowed or stopped growth at all concentrations (low: 1 ppm, medium: 5 ppm, high: 10 ppm of copper sulfate) used. Final plant drymass was significantly lower in medium and high copper treatments compared with controls. E. canadensis appears to be very sensitive to copper levels, and may be useful as a biomonitor of copper levels in aquatic systems. However, its utility as a bioaccumulator may be limited, because we observed senescence of most leaves in all copper-treated plants following 4 weeks of treatment

  3. Constituents of the essential oil in Solidago canadensis L. from Eurasia

    OpenAIRE

    Olga Shelepova; Yulia Vinogradova; Boris Zaitchik; Alexander Ruzhitsky; Olga Grygorieva; Ján Brindza

    2018-01-01

    Hydro distilled essential oils in air-dry samples of aerial parts of Solidago canadensis L., (Asteraceae) from eight local invasive populations were investigated by GC-MS analysis. A comparative study on quantity and composition of the essential oils obtained from plants, growing in different ecological and climatic conditions, ontogenesis phase and different plant organs was carried out The major compounds detected in oil samples of S. canadensis were α-pinene (1.3 - 61.27%), limonene ...

  4. [Effects of Cuscuta australis parasitism on the growth, reproduction and defense of Solidago canadensis].

    Science.gov (United States)

    Yang, Bei-fen; Du, Le-shan; Li, Jun-min

    2015-11-01

    In order to find out how parasitic Cuscuta australis influences the growth and reproduction of Solidago canadensis, the effects of the parasitism of C. australis on the morphological, growth and reproductive traits of S. canadensis were examined and the relationships between the biomass and the contents of the secondary metabolites were analyzed. The results showed that the parasitism significantly reduced the plant height, basal diameter, root length, root diameter, root biomass, stem biomass, leaf biomass, total biomass, number of inflorescences branches, axis length of inflorescence, and number of inflorescence. In particular, plant height, number of inflorescence and the stem biomass of parasitized S. canadensis were only 1/2, 1/5 and 1/8 of non-parasitized plants, respectively. There was no significant difference of plant height, root length, stem biomass and total biomass between plants parasitized with high and low intensities. But the basal diameter, root volume, leaf biomass, root biomass, the number of inflorescences branches, axis length of inflorescence and number of inflorescence of S. canadensis parasitized with high intensity were significantly lower than those of plants parasitized with low intensity. The parasitism of C. australis significantly increased the tannins content in the root and the flavonoids content in the stem of S. canadensis. The biomass of S. canadensis was significantly negatively correlated with the tannin content in the root and the flavonoids content in the stem. These results indicated that the parasitism of C. australis could inhibit the growth of S. canadensis by changing the resources allocation patterns as well as reducing the resources obtained by S. canadensis.

  5. Sanguinaria canadensis: Traditional Medicine, Phytochemical Composition, Biological Activities and Current Uses

    OpenAIRE

    Croaker, Andrew; King, Graham J.; Pyne, John H.; Anoopkumar-Dukie, Shailendra; Liu, Lei

    2016-01-01

    Sanguinaria canadensis, also known as bloodroot, is a traditional medicine used by Native Americans to treat a diverse range of clinical conditions. The plants rhizome contains several alkaloids that individually target multiple molecular processes. These bioactive compounds, mechanistically correlate with the plant’s history of ethnobotanical use. Despite their identification over 50 years ago, the alkaloids of S. canadensis have not been developed into successful therapeutic agents. Instead...

  6. Fusobacterium necrophorum in North American Bighorn Sheep ( Ovis canadensis ) Pneumonia.

    Science.gov (United States)

    Shanthalingam, Sudarvili; Narayanan, Sanjeevkumar; Batra, Sai Arun; Jegarubee, Bavananthasivam; Srikumaran, Subramaniam

    2016-07-01

    Fusobacterium necrophorum has been detected in pneumonic bighorn sheep (BHS; Ovis canadensis ) lungs, in addition to the aerobic respiratory pathogens Mannheimia haemolytica , Bibersteinia trehalosi , Pasteurella multocida , and Mycoplasma ovipneumoniae . Similar to M. haemolytica , F. necrophorum produces a leukotoxin. Leukotoxin-induced lysis and degranulation of polymorphonuclear leukocytes (PMNs) and macrophages are responsible for acute inflammation and lung tissue damage characteristic of M. haemolytica -caused pneumonia. As one approach in elucidating the role of F. necrophorum in BHS pneumonia, we determined the frequency of the presence of F. necrophorum in archived pneumonic BHS lung tissues, and susceptibility of BHS leukocytes to F. necrophorum leukotoxin. A species-specific PCR assay detected F. necrophorum in 37% of pneumonic BHS lung tissues (total tested n=70). Sequences of PCR amplicons were similar to the less virulent F. necrophorum subsp. funduliforme. Fusobacterium necrophorum leukotoxin exhibited cytotoxicity to BHS PMNs and peripheral blood mononuclear cells. As with the M. haemolytica leukotoxin, F. necrophorum leukotoxin was more toxic to BHS PMNs than domestic sheep PMNs. It is likely that F. necrophorum enters the lungs after M. haemolytica and other aerobic respiratory pathogens enter the lungs and initiate tissue damage, thereby creating a microenvironment that is conducive for anaerobic bacterial growth. In summary, Fusobacterium leukotoxin is highly toxic for BHS leukocytes; however, based on the PCR findings, it is unlikely to play a direct role in the development of BHS pneumonia.

  7. Characterization of the North American beaver (Castor canadensis) papillomavirus genome.

    Science.gov (United States)

    Rogovskyy, Artem S; Chen, Zigui; Burk, Robert D; Bankhead, Troy

    2014-01-10

    The papillomaviruses comprise a large group of viruses that cause proliferations of the stratified squamous epithelium of skin and mucosa in a variety of animals. An earlier report identified a novel papillomavirus of the North American beaver, Castor canadensis (CcanPV1) that was associated with cutaneous exophytic lesions. In the current study, we determined the sequence of the complete 7435 basepair genome of CcanPV1. The genome contains an Upstream Regulatory Region located between the end of L1 and the start of E6, and seven canonical papillomavirus open reading frames encoding five early (E6, E7, E1, E2, and E4) and two late (L2 and L1) proteins. No E5 open reading frame was detected. Phylogenetic analysis of the CcanPV1 genome places the virus between the genera Kappapapillomavirus and Mupapillomavirus. Analyses of the papillomavirus genomes detected in different species of the order Rodentia indicate these viruses do not form a monophyletic clade. Copyright © 2013 Elsevier B.V. All rights reserved.

  8. Where and How Wolves (Canis lupus Kill Beavers (Castor canadensis.

    Directory of Open Access Journals (Sweden)

    Thomas D Gable

    Full Text Available Beavers (Castor canadensis can be a significant prey item for wolves (Canis lupus in boreal ecosystems due to their abundance and vulnerability on land. How wolves hunt beavers in these systems is largely unknown, however, because observing predation is challenging. We inferred how wolves hunt beavers by identifying kill sites using clusters of locations from GPS-collared wolves in Voyageurs National Park, Minnesota. We identified 22 sites where wolves from 4 different packs killed beavers. We classified these kill sites into 8 categories based on the beaver-habitat type near which each kill occurred. Seasonal variation existed in types of kill sites as 7 of 12 (58% kills in the spring occurred at sites below dams and on shorelines, and 8 of 10 (80% kills in the fall occurred near feeding trails and canals. From these kill sites we deduced that the typical hunting strategy has 3 components: 1 waiting near areas of high beaver use (e.g., feeding trails until a beaver comes near shore or ashore, 2 using vegetation, the dam, or other habitat features for concealment, and 3 immediately attacking the beaver, or ambushing the beaver by cutting off access to water. By identifying kill sites and inferring hunting behavior we have provided the most complete description available of how and where wolves hunt and kill beavers.

  9. The Echinococcus canadensis (G7) genome: a key knowledge of parasitic platyhelminth human diseases.

    Science.gov (United States)

    Maldonado, Lucas L; Assis, Juliana; Araújo, Flávio M Gomes; Salim, Anna C M; Macchiaroli, Natalia; Cucher, Marcela; Camicia, Federico; Fox, Adolfo; Rosenzvit, Mara; Oliveira, Guilherme; Kamenetzky, Laura

    2017-02-27

    The parasite Echinococcus canadensis (G7) (phylum Platyhelminthes, class Cestoda) is one of the causative agents of echinococcosis. Echinococcosis is a worldwide chronic zoonosis affecting humans as well as domestic and wild mammals, which has been reported as a prioritized neglected disease by the World Health Organisation. No genomic data, comparative genomic analyses or efficient therapeutic and diagnostic tools are available for this severe disease. The information presented in this study will help to understand the peculiar biological characters and to design species-specific control tools. We sequenced, assembled and annotated the 115-Mb genome of E. canadensis (G7). Comparative genomic analyses using whole genome data of three Echinococcus species not only confirmed the status of E. canadensis (G7) as a separate species but also demonstrated a high nucleotide sequences divergence in relation to E. granulosus (G1). The E. canadensis (G7) genome contains 11,449 genes with a core set of 881 orthologs shared among five cestode species. Comparative genomics revealed that there are more single nucleotide polymorphisms (SNPs) between E. canadensis (G7) and E. granulosus (G1) than between E. canadensis (G7) and E. multilocularis. This result was unexpected since E. canadensis (G7) and E. granulosus (G1) were considered to belong to the species complex E. granulosus sensu lato. We described SNPs in known drug targets and metabolism genes in the E. canadensis (G7) genome. Regarding gene regulation, we analysed three particular features: CpG island distribution along the three Echinococcus genomes, DNA methylation system and small RNA pathway. The results suggest the occurrence of yet unknown gene regulation mechanisms in Echinococcus. This is the first work that addresses Echinococcus comparative genomics. The resources presented here will promote the study of mechanisms of parasite development as well as new tools for drug discovery. The availability of a high

  10. Microdistribution of 241Am in structures of submerged macrophyte Elodea canadensis growing in the Yenisei River.

    Science.gov (United States)

    Bondareva, L; Vlasova, I; Mogilnaya, O; Bolsunovsky, A; Kalmykov, S

    2010-01-01

    A submerged macrophyte of the Yenisei River, Elodea canadensis, was used to study the microdistribution of the artificial radionuclide (241)Am among different components of the plant. The total amount of (241)Am added to the experimental system was 1850+/-31 Bq/L. The total amount of (241)Am accumulated by the plants was 182 Bq per sample, or 758,333+/-385 Bq/kg dry mass. It has been found that the major portion of (241)Am accumulated by E. canadensis, up to 85%, was bound to solid components of the cells. It is observed that the microdistribution of (241)Am within different components of the submerged plant E. canadensis was not uniform. (241)Am distribution vary depending on the age of the leaf blades, the state of the cells and morphological features of the plant stem.

  11. Effect of copper on growth of an aquatic macrophyte, Elodea canadensis.

    Science.gov (United States)

    Mal, Tarun K; Adorjan, Peter; Corbett, Andrea L

    2002-01-01

    Elodea canadensis has been proposed as a potential biomonitor due to its wide distribution and apparent ability to accumulate pollutants in aquatic ecosystems. We investigated the effects of copper sulfate on growth in E. canadensis to determine its effectiveness as a biomonitor of copper pollution in aquatic systems and whether growth is a suitable index of sub-lethal stress. Copper sulfate significantly slowed or stopped growth at all concentrations (low: 1 ppm, medium: 5 ppm, high: 10 ppm of copper sulfate) used. Final plant drymass was significantly lower in medium and high copper treatments compared with controls. E. canadensis appears to be very sensitive to copper levels, and may be useful as a biomonitor of copper levels in aquatic systems. However, its utility as a bioaccumulator may be limited, because we observed senescence of most leaves in all copper-treated plants following 4 weeks of treatment.

  12. Adsorption, Bioaccumulation and Kinetics Parameters of the Phytoremediation of Cobalt from Wastewater Using Elodea canadensis.

    Science.gov (United States)

    Mosoarca, Giannin; Vancea, Cosmin; Popa, Simona; Boran, Sorina

    2018-05-01

    Present paper investigates the phytoremediation of cobalt from wastewaters using Elodea canadensis. Bioaccumulation tests were conducted at various concentrations of cobalt ranging from 1 to 15 mg/L. Final concentrations of cobalt in wastewaters, after phytoremediation, were less than 1 mg/L. E. canadensis' hyperaccumulator character with regard to cobalt is emphasised by the amount of cobalt retained: 0.39% ± 0.02% of dry mass at an initial concentration in wastewater of 15 mg/L. After 14 days of exposure to contaminant, the biomass as well as the relative growth rate has increased with the amount of cobalt in wastewaters, the plant manifesting an excellent tolerance to cobalt exposure. Adsorption of cobalt ions by E. canadensis can be well described by the Langmuir adsorption isotherm and the pseudo-second-order model equation.

  13. Microdistribution of 241Am in structures of submerged macrophyte Elodea canadensis growing in the Yenisei River

    International Nuclear Information System (INIS)

    Bondareva, L.; Vlasova, I.; Mogilnaya, O.; Bolsunovsky, A.; Kalmykov, S.

    2010-01-01

    A submerged macrophyte of the Yenisei River, Elodea canadensis, was used to study the microdistribution of the artificial radionuclide 241 Am among different components of the plant. The total amount of 241 Am added to the experimental system was 1850 ± 31 Bq/L. The total amount of 241 Am accumulated by the plants was 182 Bq per sample, or 758,333 ± 385 Bq/kg dry mass. It has been found that the major portion of 241 Am accumulated by E. canadensis, up to 85%, was bound to solid components of the cells. It is observed that the microdistribution of 241 Am within different components of the submerged plant E. canadensis was not uniform. 241 Am distribution vary depending on the age of the leaf blades, the state of the cells and morphological features of the plant stem.

  14. Enzymatic basis for fungicide removal by Elodea canadensis.

    Science.gov (United States)

    Dosnon-Olette, Rachel; Schröder, Peter; Bartha, Bernadett; Aziz, Aziz; Couderchet, Michel; Eullaffroy, Philippe

    2011-07-01

    Plants can absorb a diversity of natural and man-made toxic compounds for which they have developed diverse detoxification mechanisms. Plants are able to metabolize and detoxify a wide array of xenobiotics by oxidation, sugar conjugation, glutathione conjugation, and more complex reactions. In this study, detoxification mechanisms of dimethomorph, a fungicide currently found in aquatic media were investigated in Elodea canadensis. Cytochrome P450 (P450) activity was measured by an oxygen biosensor system, glucosyltransferases (GTs) by HPLC, glutathione S-transferases (GSTs), and ascorbate peroxidase (APOX) were assayed spectrophotometrically. Incubation of Elodea with dimethomorph induced an increase of the P450 activity. GST activity was not stimulated by dimethomorph suggesting that GST does not participate in dimethomorph detoxification. In plants exposed to dimethomorph, comparable responses were observed for GST and APOX activities showing that the GST was more likely to play a role in response to oxidative stress. Preincubation with dimethomorph induced a high activity of O- and N-GT, it is therefore likely that both enzymes participate in the phase II (conjugation) of dimethomorph detoxification process. For the first time in aquatic plants, P450 activity was shown to be induced by a fungicide suggesting a role in the metabolization of dimethomorph. Moreover, our finding is the first evidence of dimethomorph and isoproturon activation of cytochrome P450 multienzyme family in an aquatic plant, i.e., Elodea (isoproturon was taken here as a reference molecule). The detoxification of dimetomorph seems to proceed via hydroxylation, and subsequent glucosylation, and might yield soluble as well as cell wall bound residues.

  15. Arbuscular mycorrhizal fungi facilitate the invasion of Solidago canadensis L. in southeastern China

    Science.gov (United States)

    Yang, Ruyi; Zhou, Gang; Zan, Shuting; Guo, Fuyu; Su, Nannan; Li, Jing

    2014-11-01

    The significance of arbuscular mycorrhizal fungi (AMF) in the process of plant invasion is still poorly understood. We hypothesize that invasive plants would change local AMF community structure in a way that would benefit themselves but confer less advantages to native plants, thus influencing the extent of plant interactions. An AMF spore community composed of five morphospecies of Glomus with equal density (initial AMF spore community, I-AMF) was constructed to test this hypothesis. The results showed that the invasive species, Solidago canadensis, significantly increased the relative abundance of G. geosperum and G. etunicatum (altered AMF spore community, A-AMF) compared to G. mosseae, which was a dominant morphospecies in the monoculture of native Kummerowia striata. The shift in AMF spore community composition driven by S. canadensis generated functional variation between I-AMF and A-AMF communities. For example, I-AMF increased biomass and nutrient uptake of K. striata in both monocultures and mixtures of K. striata and S. canadensis compared to A-AMF. In contrast, A-AMF significantly enhanced root nitrogen (N) acquisition of S. canadensis grown in mixture. Moreover, mycorrhizal-mediated 15N uptake provided direct evidence that I-AMF and A-AMF differed in their affinities with native and invading species. The non-significant effect of A-AMF on K. striata did not result from allelopathy as root exudates of S. canadensis exhibited positive effects on seed germination and biomass of K. striata under naturally occurring concentrations. When considered together, we found that A-AMF facilitated the invasion of S. canadensis through decreasing competitiveness of the native plant K. striata. The results supported our hypothesis and can be used to improve our understanding of an ecosystem-based perspective towards exotic plant invasion.

  16. Physiological acclimation to drought stress in Solidago canadensis.

    Science.gov (United States)

    Nolf, Markus; Pagitz, Konrad; Mayr, Stefan

    2014-04-01

    Solidago canadensis is an invasive species from North America that is spreading across Europe, Australia and temperate Asia. We hypothesized that the species' wide ecological amplitude is also based on its potential in hydraulic acclimation, and analyzed hydraulic and anatomical properties along a transect with decreasing soil humidity. Stem hydraulic conductivity, vulnerability to drought-induced embolism, stomatal closure during dehydration and xylem-anatomical parameters were quantified at three sites. At the humid site, specific hydraulic conductivity of stems (1.0 ± 0.2 kg m(-1)  MPa(-1)  s(-1)) was about twofold higher, and leaf-specific conductivity about 1.5 times higher (3.1 ± 0.5 kg m(-1)  MPa(-1)  s(-1)) than at the dry site. Water potential (Ψ) at 50% loss of conductivity was -3.7 ± 0.1 MPa at the dry site and -3.1 ± 0.2 MPa at the humid site (September). Vulnerability to drought-induced embolism decreased along the transect and over the vegetation period. At drier sites, stomata started closing at lower Ψ while complete stomatal closure was reached at less negative Ψ (12% of maximum stomatal conductance: -2.5 ± 0.0 and -3.0 ± 0.2 MPa at the dry and humid site). The safety margin between stomatal closure and 50% loss of conductivity was 1.2 and 0.2 MPa at the dry and humid sites. The observed variability indicated an efficient acclimation in hydraulic conductivity and safety: plants at dry sites exhibited lower specific hydraulic conductivity, higher embolism resistance and broader safety margins, signifying a trade-off between the hydraulic safety and efficiency. The observed intraspecific plasticity in hydraulic and anatomical traits may help to explain the invasive potential of this species. © 2013 Scandinavian Plant Physiology Society.

  17. Effects of metal lead on growth and mycorrhizae of an invasive plant species (Solidago canadensis L.).

    Science.gov (United States)

    Yang, Ruyi; Yu, Guodong; Tang, Jianjun; Chen, Xin

    2008-01-01

    It is less known whether and how soil metal lead (Pb) impacts the invasion of exotic plants. A greenhouse experiment was conducted to estimate the effects of lead on the growth and mycorrhizae of an invasive species (Solidago canadensis L.) in a microcosm system. Each microcosm unit was separated into HOST and TEST compartments by a replaceable mesh screen that allowed arbuscular mycorrhizal (AM) fungal hyphae rather than plant roots to grow into the TEST compartments. Three Pb levels (control, 300, and 600 mg/kg soil) were used in this study to simulate ambient soil and two pollution sites where S. canadensis grows. Mycorrhizal inoculum comprised five indigenous arbuscular mycorrhizal fungal species (Glomus mosseae, Glomus versiform, Glomus diaphanum, Glomus geosporum, and Glomus etunicatum). The 15N isotope tracer was used to quantify the mycorrhizally mediated nitrogen acquisition of plants. The results showed that S. canadensis was highly dependent on mycorrhizae. The Pb additions significantly decreased biomass and arbuscular mycorrhizal colonization (root length colonized, RLC%) but did not affect spore numbers, N (including total N and 15N) and P uptake. The facilitating efficiency of mycorrhizae on nutrient acquisition was promoted by Pb treatments. The Pb was mostly sequestered in belowground of plant (root and rhizome). The results suggest that the high efficiency of mycorrhizae on nutrient uptake might give S. canadensis a great advantage over native species in Pb polluted soils.

  18. Allelopathic effects of the extracts from an invasive species Solidago canadensis L. on Microcystis aeruginosa.

    Science.gov (United States)

    Huang, Y; Bai, Y; Wang, Y; Kong, H

    2013-11-01

    This study investigated allelopathic effects of Solidago canadensis L. on Microcystis aeruginosa. The results showed that S. canadensis L. extracts could significantly inhibit the growth of M. aeruginosa. The inhibition ratios of samples with 0·3 and 0·5 g l(-1) extracts were over 90% after 7 days, and the transmission electron microscopy images showed the damage of M. aeruginosa cells during the incubation. In physiological and biochemical measurements, the membrane permeability and malondialdehyde (MDA) content rapidly increased with the accumulation of reactive oxygen species (ROS), and the content of antioxidant molecules (ascorbic acid (AsA) and glutathione (GSH)) increased. Although the activities of antioxidant enzymes (superoxide dismutase (SOD), peroxidase (POD) and catalase (CAT)) increased at low extracts concentrations, the effects were inhibitory when the extracts concentration increased. In conclusion, this study provided a new idea to utilize the detrimental weed S. canadensis L. to control harmful cyanobacteria. The alterations in physiology and biochemistry of M. aeruginosa cell were not in isolation, but with the stimulation of intracellular ROS that could play a fundamental role in inhibitory effects of S. canadensis L. extracts. It was inferred that terrestrial plants could have the same algistatic mechanisms as hydrophytes. © 2013 The Society for Applied Microbiology.

  19. What determines positive, neutral, and negative impacts of Solidago canadensis invasion on native plant species richness?

    Science.gov (United States)

    Dong, Li-Jia; Yu, Hong-Wei; He, Wei-Ming

    2015-11-17

    Whether plant invasions pose a great threat to native plant diversity is still hotly debated due to conflicting findings. More importantly, we know little about the mechanisms of invasion impacts on native plant richness. We examined how Solidago canadensis invasion influenced native plants using data from 291 pairs of invaded and uninvaded plots covering an entire invaded range, and quantified the relative contributions of climate, recipient communities, and S. canadensis to invasion impacts. There were three types of invasion consequences for native plant species richness (i.e., positive, neutral, and negative impacts). Overall, the relative contributions of recipient communities, S. canadensis and climate to invasion impacts were 71.39%, 21.46% and 7.15%, respectively; furthermore, the roles of recipient communities, S. canadensis and climate were largely ascribed to plant diversity, density and cover, and precipitation. In terms of direct effects, invasion impacts were negatively linked to temperature and native plant communities, and positively to precipitation and soil microbes. Soil microbes were crucial in the network of indirect effects on invasion impacts. These findings suggest that the characteristics of recipient communities are the most important determinants of invasion impacts and that invasion impacts may be a continuum across an entire invaded range.

  20. Copper and zinc in Elodea canadensis from rivers with various pollution levels

    NARCIS (Netherlands)

    Cegłowska, A.; Sokołowska, K.; Samecka-Cymerman, A.; Kolon, K.; Jusik, S.; Kempers, A.J.

    2016-01-01

    The anthropogenic impact of xenobiotics contributes to environmental risk for the aquatic environment and thus, must be controlled. Elodea canadensis, a cosmopolitan aquatic macrophyte with an important role in the ecology of many littoral zones, may provide an integrated record of pollution.

  1. Growth and stocking of eastern hemlock (Tsuga canadensis) in New England

    Science.gov (United States)

    Dale S. Solomon; William B. Leak

    2000-01-01

    Summarization of the limited growth information in mixed-species stands in New England indicates that eastern hemlock (Tsuga canadensis) may be one of the fastest growing species in diameter, second only to white pine. However, on some sites hemlock diameter growth is about equal to that of associated hardwoods. Hemlock grows slowly in height and...

  2. Rhododendron maximum impacts seed bank composition and richness following Tsuga canadensis loss in riparian forests

    Science.gov (United States)

    Tristan M. Cofer; Katherine J. Elliott; Janis K. Bush; Chelcy F. Miniat

    2018-01-01

    Southern Appalachian riparian forests have undergone changes in composition and function from invasive pathogens and pests. Castanea dentata mortality in the 1930s from chestnut blight (Cryphonectria parasitica) and Tsuga canadensis mortality in the 2000s from the hemlock woolly adelgid (Adelges tsugae) have led to the expansion and...

  3. Tsuga canadensis (L.) Carr, mortality will impact hydrologic processes in southern Appalachian forest ecosystems

    Science.gov (United States)

    Chelcy R. Ford; James M. Vose

    2007-01-01

    Eastern hemlock (Tsuga canadensis (L.) Carr.) is one of the principal riparian and cove canopy species in the southern Appalachian Mountains. Throughout its range, eastern hemlock is facing potential widespread mortality from the hemlock woolly adelgid (HWA). If HWA-induced eastern hemlock mortality alters hydrologic function, land managers...

  4. Karyological investigations on Erigeron canadensis L. and E. annuus (L. Pers. from natural stands in Poland

    Directory of Open Access Journals (Sweden)

    K. Bijok

    2015-01-01

    Full Text Available The number of chromosomes in metaphases root meristems of Erigeron canadensis L. (2n= 18 and E. annuus (L. Pers. (2n=27 was determined. The chromosomes of both species showed a morphological differentiation - they were heterobrachial or isobrachial; E. annuus had an additional unpaired isobrachial chromosome.

  5. No evidence for local adaptation to salt stress in the existing populations of invasive Solidago canadensis in China.

    Science.gov (United States)

    Li, Junmin; Liu, Haiyan; Yan, Ming; Du, Leshan

    2017-01-01

    Local adaptation is an important mechanism underlying the adaptation of plants to environmental heterogeneity, and the toxicity of salt results in strong selection pressure on salt tolerance in plants and different ecotypes. Solidago canadensis, which is invasive in China, has spread widely and has recently colonized alkali sandy loams with a significant salt content. A common greenhouse experiment was conducted to test the role of local adaptation in the successful invasion of S. canadensis into salty habitats. Salt treatment significantly decreased the growth of S. canadensis, including rates of increase in the number of leaves and plant height; the root, shoot, and total biomass. Furthermore, salt stress significantly reduced the net photosynthetic rate, stomatal conductance, transpiration rate and relative chlorophyll content but significantly increased peroxidase activity and the proline content of S. canadensis and the root/shoot ratio. Two-way analysis of variance showed that salt treatment had a significant effect on the physiological traits of S. canadensis, except for the intercellular CO2 concentration, whereas the population and the salt × population interaction had no significant effect on any physiological traits. Most of the variation in plasticity existed within and not among populations, excep for the root/shoot ratio. S. canadensis populations from soil with moderate/high salt levels grew similarly to S. canadensis populations from soils with low salt levels. No significant correlation between salt tolerance indices and soil salinity levels was observed. The plasticity of the proline content, intercellular CO2 concentration and chlorophyll content had significant correlations with the salt tolerance index. These findings indicate a lack of evidence for local adaption in the existing populations of invasive S. canadensis in China; instead, plasticity might be more important than local adaptation in influencing the physiological traits and salt

  6. No evidence for local adaptation to salt stress in the existing populations of invasive Solidago canadensis in China.

    Directory of Open Access Journals (Sweden)

    Junmin Li

    Full Text Available Local adaptation is an important mechanism underlying the adaptation of plants to environmental heterogeneity, and the toxicity of salt results in strong selection pressure on salt tolerance in plants and different ecotypes. Solidago canadensis, which is invasive in China, has spread widely and has recently colonized alkali sandy loams with a significant salt content. A common greenhouse experiment was conducted to test the role of local adaptation in the successful invasion of S. canadensis into salty habitats. Salt treatment significantly decreased the growth of S. canadensis, including rates of increase in the number of leaves and plant height; the root, shoot, and total biomass. Furthermore, salt stress significantly reduced the net photosynthetic rate, stomatal conductance, transpiration rate and relative chlorophyll content but significantly increased peroxidase activity and the proline content of S. canadensis and the root/shoot ratio. Two-way analysis of variance showed that salt treatment had a significant effect on the physiological traits of S. canadensis, except for the intercellular CO2 concentration, whereas the population and the salt × population interaction had no significant effect on any physiological traits. Most of the variation in plasticity existed within and not among populations, excep for the root/shoot ratio. S. canadensis populations from soil with moderate/high salt levels grew similarly to S. canadensis populations from soils with low salt levels. No significant correlation between salt tolerance indices and soil salinity levels was observed. The plasticity of the proline content, intercellular CO2 concentration and chlorophyll content had significant correlations with the salt tolerance index. These findings indicate a lack of evidence for local adaption in the existing populations of invasive S. canadensis in China; instead, plasticity might be more important than local adaptation in influencing the physiological

  7. Comparative analyses of plastid sequences between native and introduced populations of aquatic weeds Elodea canadensis and E. nuttallii.

    Directory of Open Access Journals (Sweden)

    Tea Huotari

    Full Text Available Non-indigenous species (NIS are species living outside their historic or native range. Invasive NIS often cause severe environmental impacts, and may have large economical and social consequences. Elodea (Hydrocharitaceae is a New World genus with at least five submerged aquatic angiosperm species living in fresh water environments. Our aim was to survey the geographical distribution of cpDNA haplotypes within the native and introduced ranges of invasive aquatic weeds Elodea canadensis and E. nuttallii and to reconstruct the spreading histories of these invasive species. In order to reveal informative chloroplast (cp genome regions for phylogeographic analyses, we compared the plastid sequences of native and introduced individuals of E. canadensis. In total, we found 235 variable sites (186 SNPs, 47 indels and two inversions between the two plastid sequences consisting of 112,193 bp and developed primers flanking the most variable genomic areas. These 29 primer pairs were used to compare the level and pattern of intraspecific variation within E. canadensis to interspecific variation between E. canadensis and E. nuttallii. Nine potentially informative primer pairs were used to analyze the phylogeographic structure of both Elodea species, based on 70 E. canadensis and 25 E. nuttallii individuals covering native and introduced distributions. On the whole, the level of variation between the two Elodea species was 53% higher than that within E. canadensis. In our phylogeographic analysis, only a single haplotype was found in the introduced range in both species. These haplotypes H1 (E. canadensis and A (E. nuttallii were also widespread in the native range, covering the majority of native populations analyzed. Therefore, we were not able to identify either the geographic origin of the introduced populations or test the hypothesis of single versus multiple introductions. The divergence between E. canadensis haplotypes was surprisingly high, and future

  8. Comparative analyses of plastid sequences between native and introduced populations of aquatic weeds Elodea canadensis and E. nuttallii.

    Science.gov (United States)

    Huotari, Tea; Korpelainen, Helena

    2013-01-01

    Non-indigenous species (NIS) are species living outside their historic or native range. Invasive NIS often cause severe environmental impacts, and may have large economical and social consequences. Elodea (Hydrocharitaceae) is a New World genus with at least five submerged aquatic angiosperm species living in fresh water environments. Our aim was to survey the geographical distribution of cpDNA haplotypes within the native and introduced ranges of invasive aquatic weeds Elodea canadensis and E. nuttallii and to reconstruct the spreading histories of these invasive species. In order to reveal informative chloroplast (cp) genome regions for phylogeographic analyses, we compared the plastid sequences of native and introduced individuals of E. canadensis. In total, we found 235 variable sites (186 SNPs, 47 indels and two inversions) between the two plastid sequences consisting of 112,193 bp and developed primers flanking the most variable genomic areas. These 29 primer pairs were used to compare the level and pattern of intraspecific variation within E. canadensis to interspecific variation between E. canadensis and E. nuttallii. Nine potentially informative primer pairs were used to analyze the phylogeographic structure of both Elodea species, based on 70 E. canadensis and 25 E. nuttallii individuals covering native and introduced distributions. On the whole, the level of variation between the two Elodea species was 53% higher than that within E. canadensis. In our phylogeographic analysis, only a single haplotype was found in the introduced range in both species. These haplotypes H1 (E. canadensis) and A (E. nuttallii) were also widespread in the native range, covering the majority of native populations analyzed. Therefore, we were not able to identify either the geographic origin of the introduced populations or test the hypothesis of single versus multiple introductions. The divergence between E. canadensis haplotypes was surprisingly high, and future research may

  9. Molecular characterization of Echinococcus granulosus sensu stricto and Echinococcus canadensis in humans and livestock from Algeria.

    Science.gov (United States)

    Zait, Houria; Kouidri, Mokhtaria; Grenouillet, Florence Elisabeth; Umhang, Gérald; Millon, Laurence; Hamrioui, Boussad; Grenouillet, Frédéric

    2016-06-01

    In Algeria, previous studies investigated genotypes of Echinococcus granulosus sensu lato in animals and identified E. granulosus sensu stricto (s.s.) genotypes G1 and G3 whereas Echinococcus canadensis genotype G6 was only reported from dromedary cysts. Molecular data on human cystic echinococcosis (CE) were limited. We implemented a large genotyping study of hydatid cysts from humans and livestock animals to specify CE's molecular epidemiology and the genetic diversity in Algeria. Fifty-four human CE cysts from patients predominantly admitted in surgical units from Mustapha Hospital, Algiers, and 16 cysts from livestock animals gathered in two geographically distinct slaughterhouses, Tiaret and Tamanrasset, were collected. Molecular characterization was performed using sequencing of two mitochondrial genes, cytochrome c oxidase subunit I (COI) and NADH dehydrogenase subunit I (NDI). In humans, G1 of E. granulosus s.s. was the main genotype (90.7 %); four samples (7.4 %) were characterized as E. granulosus s.s. G3 and one cyst as E. canadensis G6 (1.8 %). This molecular confirmation of E. canadensis G6 human infection in Algeria was observed in a Tuareg female living in a desertic area in Tamanrasset. All cysts from sheep, cattle, and goat were identified as E. granulosus s.s. G1 and the two cysts originating from dromedary as E. canadensis G6. Twenty concatenated haplotypes (COI + NDI) were characterized. Among E. granulosus s.s., one haplotype (HL1) was highly predominant in both humans and animals cysts (71.6 %). This study revealed main occurrence of E. granulosus s.s. in humans and livestock animals, with description of a predominant shared haplotype corresponding to the main worldwide observed haplotype E.granulosus s.s. G1. E. canadensis G6 was limited to South Algeria, in dromedary as well as in human.

  10. Interactions between Rocky Mountain Bighorn Sheep Ovis canadensis canadensis and Domestic Sheep Ovis aries and the Biological, Social, Economic, and Legal Implications of these Interactions on USDA Forest Service Lands in the Evanston/Mt. View Ranger District

    OpenAIRE

    Herrera, Ashly Nicole

    2012-01-01

    Strong evidence exists indicating domestic sheep (Ovis aries) can infect Rocky Mountain bighorn sheep (Ovis canadensis canadensis), a United States Forest Service (USFS) Region 4 sensitive species, with pneumonia (Callan 1991; Foreyt 1989, 1992, 1994; Foreyt and Lagerquist 1996; George et al 2008; Wehausen et al. 2011). Since the transmission of the pneumonic bacteria between the domestic and wild sheep is a result of bighorn sheep coming into contact with the bacteria carried in the mucous m...

  11. Biosynthesis of the sesquiterpene germacrene D in Solidago canadensis: 13C and (2)H labeling studies.

    Science.gov (United States)

    Steliopoulos, Panagiotis; Wüst, Matthias; Adam, Klaus-Peter; Mosandl, Armin

    2002-05-01

    The biogenetic origin of the isoprenoid building blocks of the sesquiterpene germacrene D was studied in Solidago canadensis. Feeding experiments were carried out with 1-[5,5-D(2)]deoxy-D-xylulose-5-phosphate (D(2)-DOXP), [5-13C]mevalonolactone (13C-MVL) and [1-13C]-D-glucose. The hydrodistillate of a cut shoot fed with D(2)-DOXP was investigated by enantio-MDGC-MS and the volatile fraction of a shoot supplied with 13C-MVL was examined by GC-C-IRMS. The incorporation of [1-13C]-D-glucose was analyzed by quantitative 13C NMR spectroscopy after isolation of germacrene D from the essential oil. Our labeling studies revealed that the biosynthesis of the C-15 skeleton of sesquiterpene germacrene D in Solidago canadensis proceeds predominantly via the methylerythritol phosphate pathway.

  12. Patch colonization by Trirhabda canadensis (Coleoptera: Chrysomelidae): effects of plant species composition and wind.

    Science.gov (United States)

    Morrow, P A; Tonkyn, D W; Goldburg, R J

    1989-10-01

    The goldenrod leaf beetle, Trirhabda canadensis, is known to respond to odors of host and non-host species in the laboratory. Here we report movements of T. canadensis in the field in response to volatile odors from monocultures and polycultures of host plants. Overall, beetles preferentially colonized plots with a higher density of host plants and lower diversity of allelochemicals, but under some wind conditions there were marked exceptions. At high windspeeds, they colonized whichever plot(s) was upwind. At low windspeeds, beetles colonized preferred plots even when they were not upwind. The data suggest that odor dispersion varies in a complex way with windspeed: at low windspeeds beetles received information from a wide are of vegetation and made choices while at high windspeeds information was available only from upwind plot(s).

  13. Evidence for Enhanced Mutualism Hypothesis: Solidago canadensis Plants from Regular Soils Perform Better

    OpenAIRE

    Sun, Zhen-Kai; He, Wei-Ming

    2010-01-01

    The important roles of plant-soil microbe interactions have been documented in exotic plant invasion, but we know very little about how soil mutualists enhance this process (i.e. enhanced mutualism hypothesis). To test this hypothesis we conducted two greenhouse experiments with Solidago canadensis (hereafter Solidago), an invasive forb from North America, and Stipa bungeana (hereafter Stipa), a native Chinese grass. In a germination experiment, we found soil microbes from the rhizospheres of...

  14. Chemical constituents from Solidago canadensis with hypolipidemic effects in HFD-fed hamsters.

    Science.gov (United States)

    Huang, Ying; Hao, Yan-Li; Mai, Xiao-Yan

    2013-01-01

    Two new compounds, 8-dehydroxymethylvisanol (1) and 9-O-[3-O-acetyl-β-d-glucopyranosyl]-4-hydroxy-cinnamic acid (4), together with two known lignans, visanol (2) and 9-aldehydevibsanol (3), were isolated from the 80% EtOH extract of Solidago canadensis. The structures of the two new compounds were elucidated on the basis of 1D, 2D NMR, and mass spectral analysis. All the lignans exhibited moderate hypolipidemic activity in high-fat diet-fed hamsters.

  15. Individual Plasticity of the Shade Response of the Invasive Solidago canadensis in China.

    Directory of Open Access Journals (Sweden)

    Leshan Du

    Full Text Available To evaluate the population variation, individual plasticity, and local adaptability of Solidago canadensis in response to shade treatment, we conducted a common pots experiment with a total of 150 ramets (5 genets, 15 populations, and 2 treatments subjected to both control (natural light and shady treatment (10% of natural light. Shade treatment significantly reduced growth and content of defense metabolites in S. canadensis. Compared to control, shading led to increased height, decreased basal diameter, increased leaf width, increased leaf length, increased chlorophyll content, stronger photosynthetic rate (Pn, stronger stomatal conductance (gs, and lower root to shoot ratio. Three-way analysis of variance revealed geographical origin to significantly affect the basal diameter of S. canadensis, while genotype significantly affected plant height, intercelluar CO2 concentration (Ci, transpiration rate (Tr, and proline content. Significant interactive effects between shade and geographic origin were prevalent for most traits. The phenotypic differentiation coefficient of the plasticity of all traits was below 0.4, indicating that most of all variations can be found among individuals within populations. Phenotypic selection analysis revealed that fitness was significantly positively related to plant height, basal diameter, Ci, total flavonoid content, as well as the plasticity of plant height, leaf length, leaf width, gs, Ci, total flavonoid content, and malondialdehyde content under the control condition. However, subjected to shade, fitness was only significantly positively related to plant height, basal diameter, and the plasticity of basal diameter. Rather than local adaption, these results suggest that individual plasticity played a more prominent role in the shade response of the invasive S. canadensis.

  16. Individual Plasticity of the Shade Response of the Invasive Solidago canadensis in China.

    Science.gov (United States)

    Du, Leshan; Liu, Haiyan; Yan, Ming; Li, Junmin; Li, Junsheng

    2017-01-01

    To evaluate the population variation, individual plasticity, and local adaptability of Solidago canadensis in response to shade treatment, we conducted a common pots experiment with a total of 150 ramets (5 genets, 15 populations, and 2 treatments) subjected to both control (natural light) and shady treatment (10% of natural light). Shade treatment significantly reduced growth and content of defense metabolites in S. canadensis. Compared to control, shading led to increased height, decreased basal diameter, increased leaf width, increased leaf length, increased chlorophyll content, stronger photosynthetic rate (Pn), stronger stomatal conductance (gs), and lower root to shoot ratio. Three-way analysis of variance revealed geographical origin to significantly affect the basal diameter of S. canadensis, while genotype significantly affected plant height, intercelluar CO2 concentration (Ci), transpiration rate (Tr), and proline content. Significant interactive effects between shade and geographic origin were prevalent for most traits. The phenotypic differentiation coefficient of the plasticity of all traits was below 0.4, indicating that most of all variations can be found among individuals within populations. Phenotypic selection analysis revealed that fitness was significantly positively related to plant height, basal diameter, Ci, total flavonoid content, as well as the plasticity of plant height, leaf length, leaf width, gs, Ci, total flavonoid content, and malondialdehyde content under the control condition. However, subjected to shade, fitness was only significantly positively related to plant height, basal diameter, and the plasticity of basal diameter. Rather than local adaption, these results suggest that individual plasticity played a more prominent role in the shade response of the invasive S. canadensis.

  17. Role of carriers in the transmission of pneumonia in bighorn sheep (Ovis canadensis)

    OpenAIRE

    Raghavan, Bindu; Erickson, Kayla; Kugadas, Abirami; Batra, Sai A.; Call, Douglas R.; Davis, Margaret A.; Foreyt, William J.; Srikumaran, Subramaniam

    2016-01-01

    ABSTRACT In the absence of livestock contact, recurring lamb mortality in bighorn sheep (Ovis canadensis) populations previously exposed to pneumonia indicates the likely presence of carriers of pneumonia-causing pathogens, and possibly inadequate maternally derived immunity. To investigate this problem we commingled na?ve, pregnant ewes (n=3) with previously exposed rams (n=2). Post-commingling, all ewes and lambs born to them acquired pneumonia-causing pathogens (leukotoxin-producing Pasteu...

  18. Cyto-histological processes during the differentiation of the tapetal cells in the anthers of Anthemis tinctoria L., Erigeron annuus (L. Pers. and E. canadensis L.

    Directory of Open Access Journals (Sweden)

    K. Bijok

    2015-01-01

    Full Text Available Tapetal cells in the anthers of Anthemis tinctoria, Erigeron annus and E. canadensis were uninucleate in the premeiotic stage of the PMC's. Ta-petum differentiation with inhibited cytokinesis took place during the period of meiotic divisions. In E. canadensis both mitoses were normal, wheareas in A. tinctoria and E. canadensis after both first and second mitotic divisions as a result of numerous disturbances polyploid nuclei were formed.

  19. Constituents of the essential oil in Solidago canadensis L. from Eurasia

    Directory of Open Access Journals (Sweden)

    Olga Shelepova

    2018-02-01

    Full Text Available Hydro distilled essential oils in air-dry samples of aerial parts of Solidago canadensis L., (Asteraceae from eight local invasive populations were investigated by GC-MS analysis. A comparative study on quantity and composition of the essential oils obtained from plants, growing in different ecological and climatic conditions, ontogenesis phase and different plant organs was carried out The major compounds detected in oil samples of S. canadensis were α-pinene (1.3 - 61.27%, limonene (0.5 - 22.5%, bornyl acetat (3.4 - 29.8% and germacrene D (1.8 - 39.2%. Samples from inflorescences contained the maximal percentage of monoterpene hydrocarbons, while the leaves' samples showed the maximal cumulative percentage of sesquiterpene and monoterpene hydrocarbons. Data obtained from our studies confirm the availability of alien invasive species Solidago canadensis for medicine and many other purposes. The variability of the qualitative and quantitative composition of essential oils in different geographical locations will allow futher selection of form containing the maximum amount of active substances.

  20. A microanatomical and histological study of the postcranial dermal skeleton of the Devonian actinopterygian Cheirolepis canadensis

    Directory of Open Access Journals (Sweden)

    Louise Zylberberg

    2016-06-01

    Full Text Available The Devonian stem-actinoterygian Cheirolepis canadensis is potentially important to understand the evolution of the dermal skeleton of osteichthyans, but the last detailed histological study on this taxon was published more than forty years ago. Here, we present new data about the morphology and the histological structure of scales, fulcra, and fin-rays in the Devonian actinopterygian Cheirolepis canadensis through SEM and photomicroscopy. The scales have a typical palaeoniscoid organisation, with ganoine layers overlaying dentine and a bony basal plate, but the ganoine surface lacks the characteristic microtubercles that have been described on the ganoine surface of the scales of polypterids and many other actinopterygians. Fin-rays are composed of segmented and ramified lepidotrichia that show a structure reminiscent of scales, with ganoine and dentine components lying on a thick bony base. We describe articular processes between lepidotrichia that are reminiscent of, and plausibly homologous with, the peg-and-socket articulations between the scales. The analysis of the postcranial dermal skeleton of Cheirolepis canadensis shows that structural similarities between scales and lepidotrichia of this basal actinopterygian are greater than in more recent actinopterygians. The new data on histological and microanatomical structure of the dermal skeleton lend additional support to the hypothesis that lepidotichia are derivatives of scales, though they are also compatible with the more general hypothesis that scales, lepidotrichia and fulcra belong to the same morphogenetic system.

  1. Characterization of terpenoid volatiles from cultivars of eastern hemlock (Tsuga canadensis).

    Science.gov (United States)

    Lagalante, Anthony F; Montgomery, Michael E; Calvosa, Frank C; Mirzabeigi, Michael N

    2007-12-26

    The volatile terpenoid fraction from needles in 13 cultivars of Tsuga canadensis L. (Carriere) was analyzed by gas chromatography with mass spectrometry (GC-MS). The results of this study are considered along with previously reported results for foliar terpenoid levels of the Asian (T. sieboldii, T. chinensis, T. diversifolia), western North American (T. mertensiana, T. heterophylla), and eastern North American species (T. canadensis, T. caroliniana) of hemlock to draw conclusions about the potential of cultivar host resistance to the hemlock woolly adelgid (Adelges tsugae Annand). It is suggested that hemlocks in eastern North America have adapted their terpenoid chemistry for protection against endemic defoliators and that this has made them vulnerable to non-native, sucking pests such as adelgids and scales. Some cultivars of T. canadensis have a terpenoid profile that resembles that of the resistant noneastern North American species and are candidates for biological screening for resistance. Among the cultivars, the variation in terpenoid chemistry did not absolutely correspond with the considerable differences in morphological characters observed, indicating that the terpenoid chemistry is not definitively coupled with hemlock morphology.

  2. Assessing Timing and Causes of Neonatal Lamb Losses in a Bighorn Sheep ( Ovis canadensis canadensis ) Herd via Use of Vaginal Implant Transmitters.

    Science.gov (United States)

    Grigg, Jamin L; Wolfe, Lisa L; Fox, Karen A; Killion, Halcyon J; Jennings-Gaines, Jessica; Miller, Michael W; P Dreher, Brian

    2017-07-01

    We evaluated the use of vaginal implant transmitters (VITs) as a means of detecting, capturing, and radio collaring Rocky Mountain bighorn sheep ( Ovis canadensis canadensis) lambs to estimate survival and to facilitate carcass recovery to assess causes of mortality. We focused on one of several bighorn herds in Colorado, US, suffering from depressed recruitment that was not preceded by a classic all-age die-off. We captured, radio-collared, diagnosed pregnancy by ultrasound examination, and inserted VITs into 15 pregnant ewes from a herd residing near Granite, Colorado. We were subsequently able to collar a lamb from each of 13 VITs, and two additional lambs opportunistically from ewes without transmitters. As lambs died, we recovered and submitted carcasses for necropsy and laboratory assessment. All lambs captured and one additional lamb (carcass found opportunistically) were dead by about 130 d of age: 11 died of apparent pneumonia (all within 8-10 wk of age), one died from trauma after being kicked or trampled, one was killed by a mountain lion ( Puma concolor ), and three died of starvation likely caused by abandonment after capture. Pneumonic lambs had involvement of Mycoplasma ovipneumoniae and leukotoxigenic Bibersteinia trehalosi . The use of VITs and lamb collars enabled us to efficiently identify pneumonia as the predominant cause of depressed lamb recruitment in this herd; however, we urge care in neonatal lamb handling to minimize abandonment.

  3. 78 FR 53002 - Notice of Proposed Buy America Waiver for a Video Ready Access Device Cabinet

    Science.gov (United States)

    2013-08-27

    ... relocation associated with the LYNX Blue Line Extension project. This notice is to inform the public of the... by AT&T. This utility relocation will be performed in connection with the CATS LYNX Blue Line... of the components of the product must be of U.S. origin. A component is considered of U.S. origin if...

  4. Selective Predation of a Stalking Predator on Ungulate Prey.

    Directory of Open Access Journals (Sweden)

    Marco Heurich

    Full Text Available Prey selection is a key factor shaping animal populations and evolutionary dynamics. An optimal forager should target prey that offers the highest benefits in terms of energy content at the lowest costs. Predators are therefore expected to select for prey of optimal size. Stalking predators do not pursue their prey long, which may lead to a more random choice of prey individuals. Due to difficulties in assessing the composition of available prey populations, data on prey selection of stalking carnivores are still scarce. We show how the stalking predator Eurasian lynx (Lynx lynx selects prey individuals based on species identity, age, sex and individual behaviour. To address the difficulties in assessing prey population structure, we confirm inferred selection patterns by using two independent data sets: (1 data of 387 documented kills of radio-collared lynx were compared to the prey population structure retrieved from systematic camera trapping using Manly's standardized selection ratio alpha and (2 data on 120 radio-collared roe deer were analysed using a Cox proportional hazards model. Among the larger red deer prey, lynx selected against adult males-the largest and potentially most dangerous prey individuals. In roe deer lynx preyed selectively on males and did not select for a specific age class. Activity during high risk periods reduced the risk of falling victim to a lynx attack. Our results suggest that the stalking predator lynx actively selects for size, while prey behaviour induces selection by encounter and stalking success rates.

  5. microRNA profiling in the zoonotic parasite Echinococcus canadensis using a high-throughput approach.

    Science.gov (United States)

    Macchiaroli, Natalia; Cucher, Marcela; Zarowiecki, Magdalena; Maldonado, Lucas; Kamenetzky, Laura; Rosenzvit, Mara Cecilia

    2015-02-06

    microRNAs (miRNAs), a class of small non-coding RNAs, are key regulators of gene expression at post-transcriptional level and play essential roles in fundamental biological processes such as development and metabolism. The particular developmental and metabolic characteristics of cestode parasites highlight the importance of studying miRNA gene regulation in these organisms. Here, we perform a comprehensive analysis of miRNAs in the parasitic cestode Echinococcus canadensis G7, one of the causative agents of the neglected zoonotic disease cystic echinococcosis. Small RNA libraries from protoscoleces and cyst walls of E. canadensis G7 and protoscoleces of E. granulosus sensu stricto G1 were sequenced using Illumina technology. For miRNA prediction, miRDeep2 core algorithm was used. The output list of candidate precursors was manually curated to generate a high confidence set of miRNAs. Differential expression analysis of miRNAs between stages or species was estimated with DESeq. Expression levels of selected miRNAs were validated using poly-A RT-qPCR. In this study we used a high-throughput approach and found transcriptional evidence of 37 miRNAs thus expanding the miRNA repertoire of E. canadensis G7. Differential expression analysis showed highly regulated miRNAs between life cycle stages, suggesting a role in maintaining the features of each developmental stage or in the regulation of developmental timing. In this work we characterize conserved and novel Echinococcus miRNAs which represent 30 unique miRNA families. Here we confirmed the remarkable loss of conserved miRNA families in E. canadensis, reflecting their low morphological complexity and high adaptation to parasitism. We performed the first in-depth study profiling of small RNAs in the zoonotic parasite E. canadensis G7. We found that miRNAs are the preponderant small RNA silencing molecules, suggesting that these small RNAs could be an essential mechanism of gene regulation in this species. We also

  6. Seroprevalences of antibodies to Neospora caninum and Toxoplasma gondii in zoo animals.

    Science.gov (United States)

    Sedlák, K; Bártová, E

    2006-03-31

    Neospora caninum is an apicomplexan parasite that causes neuromuscular disease in dogs and abortions in cattle. Little is known about the prevalence of antibodies to this parasite in zoo animals. Sera from 556 animals, from 13 Czech and Slovak zoos were tested for antibodies to N. caninum and Toxoplasma gondii by indirect fluorescent antibody test. Antibodies to N. caninum were found in 31 of 556 zoo animals (5.6%), representing 18 of 114 species tested: Eurasian wolf (Canis lupus lupus), Maned wolf (Chrysocyon brachyurus), fennec (Vulpes zerda), cheetah (Acinonyx jubatus), jaguarundi (Herpailurus yaguarondi), Eurasian lynx (Lynx lynx), Indian lion (Panthera leo goojratensis), fisher (Martes pennanti), blackbuck (Antilope cervicapra), European bison (Bison bonasus), lechwe (Kobus leche), African buffalo (Syncerus caffer caffer), eland (Taurotragus oryx), sitatunga (Tragelaphus spekei gratus), Thorold's deer (Cervus albirostris), Eastern elk (C. elaphus canadensis), Vietnam sika deer (C. nippon pseudaxis) and Père David's deer (Elaphurus davidianus). Titres ranged from 1:40 to 1:2560. The highest prevalence 50% was found in family mustelidae of the order carnivora. Antibodies to T. gondii were detected in 193 of 556 zoo animals (34.7%) representing 72 of 114 species tested, with titres ranging from 1:40 to 1:40960. The highest prevalence 100% was found in families: hyaenidae, mustelidae, ursidae and viveridae of the order carnivora. The results of this study indicate that zoo animals have more exposure to T. gondii than to N. caninum. It is the first report of seroprevalence of antibodies to N. caninum in European zoo animals.

  7. First evidence of hemoplasma infection in free-ranging Namibian cheetahs (Acinonyx jubatus).

    Science.gov (United States)

    Krengel, Annika; Meli, Marina L; Cattori, Valentino; Wachter, Bettina; Willi, Barbara; Thalwitzer, Susanne; Melzheimer, Jörg; Hofer, Heribert; Lutz, Hans; Hofmann-Lehmann, Regina

    2013-03-23

    Infections with feline hemotropic mycoplasmas (hemoplasmas) have been documented in domestic cats and free-ranging feline species with high prevalences in Iberian lynxes (Lynx pardinus), Eurasian lynxes (Lynx lynx), European wildcats (Felis silvestris silvestris), African lions (Panthera leo) in Tanzania and domestic cats in South Africa. The prevalence of hemoplasmas has not yet been investigated in free-ranging felids in southern Africa. In this study we screened 73 blood samples from 61 cheetahs in central Namibia for the presence of hemoplasmas using quantitative real-time PCR. One of the cheetahs tested PCR-positive. Phylogenetic analysis based on partial sequencing of the 16S rRNA and RNAse P genes revealed that the isolate belongs to the Mycoplasma haemofelis/haemocanis group. This is the first molecular evidence of a hemoplasma infection in a free-ranging cheetah. Copyright © 2012 Elsevier B.V. All rights reserved.

  8. Chromosomal abnormalities in roots of aquatic plant Elodea canadensis as a tool for testing genotoxicity of bottom sediments.

    Science.gov (United States)

    Zotina, Tatiana; Medvedeva, Marina; Trofimova, Elena; Alexandrova, Yuliyana; Dementyev, Dmitry; Bolsunovsky, Alexander

    2015-12-01

    Submersed freshwater macrophytes are considered as relevant indicators for use in bulk bottom sediment contact tests. The purpose of this study was to estimate the validity of endpoints of aquatic plant Elodea canadensis for laboratory genotoxicity testing of natural bottom sediments. The inherent level of chromosome abnormalities (on artificial sediments) in roots of E. canadensis under laboratory conditions was lower than the percentage of abnormal cells in bulk sediments from the Yenisei River. The percentage of abnormal cells in roots of E. canadensis was more sensitive to the presence of genotoxic agents in laboratory contact tests than in the natural population of the plant. The spectra of chromosomal abnormalities that occur in roots of E. canadensis under natural conditions in the Yenisei River and in laboratory contact tests on the bulk bottom sediments from the Yenisei River were similar. Hence, chromosome abnormalities in roots of E. canadensis can be used as a relevant and sensitive genotoxicity endpoint in bottom sediment-contact tests. Copyright © 2015 Elsevier Inc. All rights reserved.

  9. Microdistribution of {sup 241}Am in structures of submerged macrophyte Elodea canadensis growing in the Yenisei River

    Energy Technology Data Exchange (ETDEWEB)

    Bondareva, L., E-mail: lydiabondareva@gmail.co [Institute of Biophysics, Siberian Branch of Russian Academy of Sciences, 50 Akademgorodok, Krasnoyarsk 660036 (Russian Federation); Vlasova, I. [Chemistry Department Lomonosov Moscow State University, Leninskie Gory, Moscow 119991 (Russian Federation); Mogilnaya, O.; Bolsunovsky, A. [Institute of Biophysics, Siberian Branch of Russian Academy of Sciences, 50 Akademgorodok, Krasnoyarsk 660036 (Russian Federation); Kalmykov, S. [Chemistry Department Lomonosov Moscow State University, Leninskie Gory, Moscow 119991 (Russian Federation)

    2010-01-15

    A submerged macrophyte of the Yenisei River, Elodea canadensis, was used to study the microdistribution of the artificial radionuclide {sup 241}Am among different components of the plant. The total amount of {sup 241}Am added to the experimental system was 1850 +- 31 Bq/L. The total amount of {sup 241}Am accumulated by the plants was 182 Bq per sample, or 758,333 +- 385 Bq/kg dry mass. It has been found that the major portion of {sup 241}Am accumulated by E. canadensis, up to 85%, was bound to solid components of the cells. It is observed that the microdistribution of {sup 241}Am within different components of the submerged plant E. canadensis was not uniform. {sup 241}Am distribution vary depending on the age of the leaf blades, the state of the cells and morphological features of the plant stem.

  10. Extracellular polymer substance synthesized by a halophilic bacterium Chromohalobacter canadensis 28.

    Science.gov (United States)

    Radchenkova, Nadja; Boyadzhieva, Ivanka; Atanasova, Nikolina; Poli, Annarita; Finore, Ilaria; Di Donato, Paola; Nicolaus, Barbara; Panchev, Ivan; Kuncheva, Margarita; Kambourova, Margarita

    2018-04-03

    Halophilic microorganisms are producers of a lot of new compounds whose properties suggest promising perspectives for their biotechnological exploration. Moderate halophilic bacterium Chromohalobacter canadensis 28 was isolated from Pomorie salterns as an extracellular polymer substance (EP) producer. The best carbon source for extracellular polymer production was found to be lactose, a sugar received as a by-product from the dairy industry. After optimization of the culture medium and physicochemical conditions for cultivation, polymer biosynthesis increased more than 2-fold. The highest level of extracellular polymer synthesis by C. canadensis 28 was observed in an unusually high NaCl concentration (15% w/v). Chemical analysis of the purified polymer revealed the presence of an exopolysaccharide (EPS) fraction (14.3% w/w) and protein fraction (72% w/w). HPLC analysis of the protein fraction showed the main presence of polyglutamic acid (PGA) (75.7% w/w). EPS fraction analysis revealed the following sugar composition (% w/w): glucosamine 36.7, glucose 32.3, rhamnose 25.4, xylose 1.7, and not identified sugar 3.9. The hydrogel formed by PGA and EPS fractions showed high swelling behavior, very good emulsifying and stabilizing properties, and good foaming ability. This is the first report for halophilic bacterium able to synthesize a polymer containing PGA fraction. The synthesized biopolymer shows an extremely high hydrophilicity, due to the simultaneous presence of PGA and EPS. The analysis of its functional properties and the presence of glucosamine in the highest proportion in EPS fraction clearly determine the potential of EP synthesized by C. canadensis 28 for application in the cosmetics industry.

  11. Isolation and characterization of polymorphic microsatellite loci from the invasive plant Solidago canadensis (Asteraceae).

    Science.gov (United States)

    Zhao, S-Y; Sun, S-G; Guo, Y-H; Chen, J-M; Wang, Q-F

    2012-02-17

    Solidago canadensis, a clonal herb originally from North America (common name: Canada goldenrod), is an invasive species in many countries. We developed microsatellite primers for this species. Eleven polymorphic loci were generated and primers were designed. Polymorphism of these 11 loci was assessed in 35 plants from two populations (Wuhan and Shanghai) in China. The number of alleles per locus ranged from 3 to 14. The observed and expected heterozygosities varied from 0.0732 to 0.7391 and from 0.1177 to 0.8687, respectively. These microsatellite markers will be useful tools for studies of population genetics in the native and invasive range of this species.

  12. Chemical composition and antimicrobial activity of solidago canadensis linn. Root essential oil.

    Science.gov (United States)

    Mishra, Devendra; Joshi, Shivani; Bisht, Ganga; Pilkhwal, Sangeeta

    2010-06-01

    The essential oil from the roots of Solidago canadensis Linn. (fam. Asteraceae) was analyzed by GC, GC/MS and NMR spectroscopy. Thirty nine constituents comprising 75.4% of the total oil were identified from the oil. Thymol constituted 20.25% of the oil followed by α-copaene (6.26%) and carvacrol (5.51%). The antimicrobial activity of the oil was evaluated using disc diffusion method. Results showed that the oil exhibited significant antibacterial activity against S. feacalis and E. coli whereas it showed moderate antifungal activity against C. albicans.

  13. CHEMICAL COMPOSITION AND ANTIMICROBIAL ACTIVITY OF SOLIDAGO CANADENSIS LINN. ROOT ESSENTIAL OIL

    OpenAIRE

    Mishra, Devendra; Joshi, Shivani; Bisht, Ganga; Pilkhwal, Sangeeta

    2010-01-01

    The essential oil from the roots of Solidago canadensis Linn. (fam. Asteraceae) was analyzed by GC, GC/MS and NMR spectroscopy. Thirty nine constituents comprising 75.4% of the total oil were identified from the oil. Thymol constituted 20.25% of the oil followed by α-copaene (6.26%) and carvacrol (5.51%). The antimicrobial activity of the oil was evaluated using disc diffusion method. Results showed that the oil exhibited significant antibacterial activity against S. feacalis and E. coli wher...

  14. Kunnskapsgrunnlag for handlingsplan mot vasspest (Elodea canadensis) og smal vasspest (Elodea nuttallii) i Norge

    OpenAIRE

    Mjelde, M.; Berge, D.; Edvardsen, H.

    2012-01-01

    Den foreliggende rapporten utgjør kunnskapsgrunnlaget for Handlingsplan mot vasspest (Elodea canadensis) og smal vasspest (Elodea nuttallii). Rapporten gir en oppdatert oversikt over de to artenes biologi og økologi, utbredelse og sprednings­veier, samt kjente effekter på vannøkosystemet. Kunnskapsbehov diskuteres, bl.a. knyttet til artenes økologiske krav og effekter på biologisk mangfold. Rapporten omtaler tiltak for å hindre videre spredning og tiltak for å redusere eller bekjempe bestande...

  15. Vasspest (Elodea canadensis) og smal vasspest (Elodea nuttallii) Jæren 2006

    OpenAIRE

    Mjelde, M.

    2006-01-01

    Årsliste 2006 For å skaffe en oversikt over status for vasspest (Elodea canadensis) i Skas-Heigre-kanalen og nærliggende lokaliteter ble vannvegetasjonen i området kartlagt i 2006. Vasspest har fortsatt stor forekomst i Skas-Heigre-kanalen ved Soma, der den ble registrert første gang i 2005. Den ble ikke registrert lenger ned i kanalen, heller ikke i Grudavatn. Heller ikke i nærliggende lokaliteter ble vasspest registrert. Lokaliteten for smal vasspest (Elodea nuttallii), Fuglestadåna, ble...

  16. Biomolecular characterization and protein sequences of the Campanian hadrosaur B. canadensis.

    Science.gov (United States)

    Schweitzer, Mary H; Zheng, Wenxia; Organ, Chris L; Avci, Recep; Suo, Zhiyong; Freimark, Lisa M; Lebleu, Valerie S; Duncan, Michael B; Vander Heiden, Matthew G; Neveu, John M; Lane, William S; Cottrell, John S; Horner, John R; Cantley, Lewis C; Kalluri, Raghu; Asara, John M

    2009-05-01

    Molecular preservation in non-avian dinosaurs is controversial. We present multiple lines of evidence that endogenous proteinaceous material is preserved in bone fragments and soft tissues from an 80-million-year-old Campanian hadrosaur, Brachylophosaurus canadensis [Museum of the Rockies (MOR) 2598]. Microstructural and immunological data are consistent with preservation of multiple bone matrix and vessel proteins, and phylogenetic analyses of Brachylophosaurus collagen sequenced by mass spectrometry robustly support the bird-dinosaur clade, consistent with an endogenous source for these collagen peptides. These data complement earlier results from Tyrannosaurus rex (MOR 1125) and confirm that molecular preservation in Cretaceous dinosaurs is not a unique event.

  17. Solidago canadensis invasion affects soil N-fixing bacterial communities in heterogeneous landscapes in urban ecosystems in East China.

    Science.gov (United States)

    Wang, Congyan; Jiang, Kun; Zhou, Jiawei; Wu, Bingde

    2018-03-12

    Soil nitrogen-fixing bacterial communities (SNB) can increase the level of available soil N via biological N-fixation to facilitate successful invasion of several invasive plant species (IPS). Meanwhile, landscape heterogeneity can greatly enhance regional invasibility and increase the chances of successful invasion of IPS. Thus, it is important to understand the soil micro-ecological mechanisms driving the successful invasion of IPS in heterogeneous landscapes. This study performed cross-site comparisons, via metagenomics, to comprehensively analyze the effects of Solidago canadensis invasion on SNB in heterogeneous landscapes in urban ecosystems. Rhizospheric soil samples of S. canadensis were obtained from nine urban ecosystems [Three replicate quadrats (including uninvaded sites and invaded sites) for each type of urban ecosystem]. S. canadensis invasion did not significantly affect soil physicochemical properties, the taxonomic diversity of plant communities, or the diversity and richness of SNB. However, some SNB taxa (i.e., f_Micromonosporaceae, f_Oscillatoriaceae, and f_Bacillaceae) changed significantly with S. canadensis invasion. Thus, S. canadensis invasion may alter the community structure, rather than the diversity and richness of SNB, to facilitate its invasion process. Of the nine urban ecosystems, the diversity and richness of SNB was highest in farmland wasteland. Accordingly, the community invasibility of farmland wasteland may be higher than that of the other types of urban ecosystem. In brief, landscape heterogeneity, rather than S. canadensis invasion, was the strongest controlling factor for the diversity and richness of SNB. One possible reason may be the differences in soil electrical conductivity and the taxonomic diversity of plant communities in the nine urban ecosystems, which can cause notable shifts in the diversity and richness of SNB. Copyright © 2018 Elsevier B.V. All rights reserved.

  18. A rapid field test for sylvatic plague exposure in wild animals

    Science.gov (United States)

    Abbott, Rachel C.; Hudak, Robert; Mondesire, Roy; Baeten, Laurie A.; Russell, Robin E.; Rocke, Tonie E.

    2014-01-01

    Plague surveillance is routinely conducted to predict future epizootics in wildlife and exposure risk for humans. The most common surveillance method for sylvatic plague is detection of antibodies to Yersinia pestis F1 capsular antigen in sentinel animals, such as coyotes (Canis latrans). Current serologic tests for Y. pestis, hemagglutination (HA) test and enzyme-linked immunosorbent assay (ELISA), are expensive and labor intensive. To address this need, we developed a complete lateral flow device for the detection of specific antibodies to Y. pestis F1 and V antigens. Our test detected anti-F1 and anti-V antibodies in serum and Nobuto filter paper samples from coyotes, and in serum samples from prairie dogs (Cynomys ludovicianus), lynx (Lynx canadensis), and black-footed ferrets (Mustela nigripes). Comparison of cassette results for anti-F1 and anti-V antibodies with results of ELISA or HA tests showed correlations ranging from 0.68 to 0.98. This device provides an affordable, user-friendly tool that may be useful in plague surveillance programs and as a research tool.

  19. A functional model for characterizing long-distance movement behaviour

    Science.gov (United States)

    Buderman, Frances E.; Hooten, Mevin B.; Ivan, Jacob S.; Shenk, Tanya M.

    2016-01-01

    Advancements in wildlife telemetry techniques have made it possible to collect large data sets of highly accurate animal locations at a fine temporal resolution. These data sets have prompted the development of a number of statistical methodologies for modelling animal movement.Telemetry data sets are often collected for purposes other than fine-scale movement analysis. These data sets may differ substantially from those that are collected with technologies suitable for fine-scale movement modelling and may consist of locations that are irregular in time, are temporally coarse or have large measurement error. These data sets are time-consuming and costly to collect but may still provide valuable information about movement behaviour.We developed a Bayesian movement model that accounts for error from multiple data sources as well as movement behaviour at different temporal scales. The Bayesian framework allows us to calculate derived quantities that describe temporally varying movement behaviour, such as residence time, speed and persistence in direction. The model is flexible, easy to implement and computationally efficient.We apply this model to data from Colorado Canada lynx (Lynx canadensis) and use derived quantities to identify changes in movement behaviour.

  20. First study about the development of adult Echinococcus canadensis G6 genotype of goat origin in experimentally infected dogs.

    Science.gov (United States)

    Soriano, Silvia Viviana; Debiaggi, María Florencia; Pierangeli, Nora Beatriz; Pianciola, Luis Alfredo; Bergagna, Héctor Fabián Jesús; Lazzarini, Lorena Evelina; Mazzeo, Melina Leonor; Basualdo, Juan Angel

    2016-09-15

    Echinococcus granulosus sensu lato (E. granulosus sl) must be considered as a species complex, comprising Echinococcus granulosus sensu stricto (E. granulosus ss, genotypes G1-G3), Echinococcus equinus (G4), Echinococcus ortleppi (G5) and Echinococcus canadensis (G6-G10) although the species status of E. canadensis is still controversial. These genotypes closely match the intermediate hosts associated strains described in earlier times among which E. canadensis G6 corresponds to the camel strain. As there are no studies concerning the development of adult stages of the G6 genotype from non-camel origin, the aims of the present study were: to characterize for the first time the development of E. canadensis G6 in dogs experimentally infected with protoscoleces derived from goats, to describe the resultant adult morphology, to evaluate the growth of their rostellar hooks from larval to adult stages and to determine the prepatent period of the strobilar stage of E. canadensis G6 derived from goats. The development of the strobilar stage of E. canadensis G6 genotype of goat origin was examined by studying the growth (variation of the total worm length) and segmentation in experimentally infected dogs at 14, 25, 35 and 56days post infection. A morphological characterization of 35-day-old worms as well as of larval and adult rostellar hooks was also carried out by conventional optical microscopic observations and/or by scanning electron microscopy. The prepatent period of the strobilar stage was assessed by microscopic examination of faeces from 2 infected dogs. Our results were compared with published data from the camel and other strains. The roles of the host, genotype and species in morphological and developmental features as well as the taxonomic position of E. canadensis G6 were discussed. The prepatent period of E. canadensis G6 genotype of goat origin was determined as at least, 41days. The obtained results contribute to increase the knowledge about the biology

  1. In vitro evaluation of potential bitterness-masking terpenoids from the Canada goldenrod (Solidago canadensis).

    Science.gov (United States)

    Li, Jie; Pan, Li; Fletcher, Joshua N; Lv, Wei; Deng, Ye; Vincent, Michael A; Slack, Jay P; McCluskey, T Scott; Jia, Zhonghua; Cushman, Mark; Kinghorn, A Douglas

    2014-07-25

    In a screening of extracts of selected plants native to Ohio against the human bitterness receptor hTAS2R31, a chloroform-soluble extract of the aerial parts of Solidago canadensis (Canada goldenrod) was determined to have hTAS2R31 antagonistic activity and, thus, was fractionated for isolation of potential bitterness-masking agents. One new labdane diterpenoid, solidagol (1), and six known terpenoids, including two labdane diterpenoids (2 and 3), three clerodane diterpenoids (6β-angeloyloxykolavenic acid, 6β-tigloyloxykolavenic acid, and crotonic acid), and a triterpenoid (longispinogenin), were isolated. Among these compounds, 3β-acetoxycopalic acid (2) was found to be the first member of the labdane diterpene class shown to have inhibitory activity against hTAS2R31 activation (IC50 8 μM). A homology model of hTAS2R31 was constructed, and the molecular docking of 2 to this model indicated that this diterpenoid binds well to the active site of hTAS2R31, whereas this was not the case for the closely structurally related compound 3 (sempervirenic acid). The content of 2 in the chloroform-soluble portion of the methanolic extract of S. canadensis was up to 2.24 g/100 g dry weight, as determined by HPLC.

  2. Isolation, characterization, and mechanistic studies of (-)-alpha-gurjunene synthase from Solidago canadensis.

    Science.gov (United States)

    Schmidt, C O; Bouwmeester, H J; Bülow, N; König, W A

    1999-04-15

    The leaves of the composite Solidago canadensis (goldenrod) were shown to contain (-)-alpha-gurjunene synthase activity. This sesquiterpene is likely to be the precursor for cyclocolorenone, a sesquiterpene ketone present in high amounts in S. canadensis leaves. (-)-alpha-Gurjunene synthase was purified to apparent homogeneity (741-fold) by anion-exchange chromatography (on several matrices), dye ligand chromatography, hydroxylapatite chromatography, and gel filtration. Chromatography on a gel filtration matrix indicated a native molecular mass of 48 kDa, and SDS-PAGE showed the enzyme to be composed of one subunit with a denatured mass of 60 kDa. Its maximum activity was observed at pH 7.8 in the presence of 10 mM Mg2+ and the KM value for the substrate farnesyl diphosphate was 5.5 microM. Over a range of purification steps (-)-alpha-gurjunene and (+)-gamma-gurjunene synthase activities copurified. In addition, the product ratio of the enzyme activity under several different assay conditions was always 91% (-)-alpha-gurjunene and 9% (+)-gamma-gurjunene. This suggests that the formation of these two structurally related products is catalyzed by one enzyme. For further confirmation, we carried out a number of mechanistic studies with (-)-alpha-gurjunene synthase, in which an enzyme preparation was incubated with deuterated substrate analogues. Based on mass spectrometry analysis of the products formed, a cyclization mechanism was postulated which makes it plausible that the synthase catalyzes the formation of both sesquiterpenes. Copyright 1999 Academic Press.

  3. Accumulation and release of 241Am by a macrophyte of the Yenisei River (Elodea canadensis).

    Science.gov (United States)

    Bolsunovsky, A; Zotina, T; Bondareva, L

    2005-01-01

    The source of radioactive contamination of the Yenisei River floodplain, including contamination with transuranic elements, is the Mining-and-Chemical Combine of the Russian Ministry of Atomic Energy, which has for many years been producing weapons-grade plutonium. Transuranic elements have been detected not only in the soil and sediment of the river but also in the biomass of aquatic plants. This work is an investigation of accumulation and release of 241Am by a submerged macrophyte of the Yenisei River (Elodea canadensis) in laboratory experiments. In 2000-2003, laboratory experiments were carried out with biomass of E. canadensis Mich. and filtered river water. The samples were collected from the Yenisei River upstream of the discharge of the Combine's radioactive effluent. The experiments showed that 241Am is accumulated by Elodea biomass: the activity concentration of 241Am can reach 3280+/-240 Bq/g, with the concentration factor for 241Am 16 600+/-2200l/kg. Results of chemical fractionation have proved that in the course of 241Am accumulation by Elodea biomass, 241Am tightly bound to biomass increases from 11% to 27% of the total 241Am in the biomass. Release of 241Am from the decaying Elodea biomass has been evaluated experimentally. By the end of the experiment (lasting up to 127 days), the Elodea plants had lost up to 65% of their initial 241Am activity and the rate of 241Am release into the water environment reached 23 Bq/day.

  4. Use of the aquatic plant Elodea canadensis to assess toxicity and genotoxicity of Yenisei River sediments.

    Science.gov (United States)

    Zotina, Tatiana A; Trofimova, Elena A; Medvedeva, Marina Yu; Dementyev, Dmitry V; Bolsunovsky, Alexander Ya

    2015-10-01

    The toxicity, cytotoxicity, and genotoxicity of bulk sediments from the Yenisei River (Siberia, Russia) were estimated in laboratory bioassays based on several endpoints in the aquatic plant Elodea canadensis. The bottom sediment samples were collected in the Yenisei River upstream and downstream of the sources of chemical and radioactive contamination. The testing revealed different sensitivities of Elodea endpoints to the quality of the bottom sediment: weight of shoots Elodea) was the highest in sediments with chemical pollution, whereas the highest inhibition of toxicity endpoints (shoot and root length) occurred in sediments with the highest level of radioactive pollution. The extreme response of Elodea endpoints to the quality of certain sediment samples may be regarded as related to the possible presence of unknown toxicants. The results show that E. canadensis can be used as an indicator species in laboratory contact testing of bottom sediment. The responses of shoot and root length growth endpoints of Elodea can be recommended as basic sensitivity indicators of bottom sediment toxicity. Analysis of cells carrying abnormal chromosomes in the apical root meristem of Elodea can be performed optionally in the same test to assess the genotoxicity of sediments. © 2015 SETAC.

  5. Accumulation and release of 241Am by a macrophyte of the Yenisei River (Elodea canadensis)

    International Nuclear Information System (INIS)

    Bolsunovsky, A.; Zotina, T.; Bondareva, L.

    2005-01-01

    The source of radioactive contamination of the Yenisei River floodplain, including contamination with transuranic elements, is the Mining-and-Chemical Combine of the Russian Ministry of Atomic Energy, which has for many years been producing weapons-grade plutonium. Transuranic elements have been detected not only in the soil and sediment of the river but also in the biomass of aquatic plants. This work is an investigation of accumulation and release of 241 Am by a submerged macrophyte of the Yenisei River (Elodea canadensis) in laboratory experiments. In 2000-2003, laboratory experiments were carried out with biomass of E. canadensis Mich. and filtered river water. The samples were collected from the Yenisei River upstream of the discharge of the Combine's radioactive effluent. The experiments showed that 241 Am is accumulated by Elodea biomass: the activity concentration of 241 Am can reach 3280 ± 240 Bq/g, with the concentration factor for 241 Am 16 600 ± 2200 l/kg. Results of chemical fractionation have proved that in the course of 241 Am accumulation by Elodea biomass, 241 Am tightly bound to biomass increases from 11% to 27% of the total 241 Am in the biomass. Release of 241 Am from the decaying Elodea biomass has been evaluated experimentally. By the end of the experiment (lasting up to 127 days), the Elodea plants had lost up to 65% of their initial 241 Am activity and the rate of 241 Am release into the water environment reached 23 Bq/day

  6. Projected Future Distribution of Tsuga canadensis across Alternative Climate Scenarios in Maine, U.S

    Directory of Open Access Journals (Sweden)

    Kathleen Dunckel

    2017-08-01

    Full Text Available Climate change is having an impact on forest ecosystems around the world and is expected to alter the suitable habitat of individual tree species. Forest managers require resources about potential impacts of climate change at the regional scale to aid in climate mitigation efforts. By understanding the geographic distribution of changes in suitable habitat, migration corridors can be identified for conservation and active management. With the increased availability of climate projection data, ancillary Geographic Information Systems data, and field observations, modeling efforts at the regional scale are now possible. Here, we modeled and mapped the continuous distribution of Tsuga canadensis throughout the state of Maine at the regional scale(30 m with high precision (89% of pixels had a coefficient of variation ≤ 4.0%. The random forest algorithm was used to create a strong prediction of suitable habitat for the years 2050 and 2100 from both high and low emission climate projections. The results clearly suggest a significant gain in suitable habitat for Tsuga canadensis range with a general northwest expansion.

  7. Physiological response and differential leaf proteome pattern in the European invasive Asteraceae Solidago canadensis colonizing a former cokery soil.

    Science.gov (United States)

    Immel, Françoise; Renaut, Jenny; Masfaraud, Jean-François

    2012-02-02

    Derelict contaminated sites are often colonized spontaneously by plant species leading to a vegetal cover thought to limit particle dispersal and polluted water infiltration. Those plants must cope with soil pollutants through tolerance mechanisms that are not yet fully understood. Here, we focused our attention on a particular Asteraceae plant, Solidago canadensis, considered as invasive in Europe. S. canadensis spontaneously growing on either polluted (NM soil) or control soils dumped on experimental plots were studied for their physiological status, oxidative stress and 2D-DIGE of leaf extracts. S. canadensis tolerance to soil pollutants was demonstrated since growth rates, allocation to reproduction ratios and Fv/Fm ratios were similar in plants from control and NM soil. At the cell level, the catalase activity level was increased in plants collected on NM soil while lipoperoxidation was unaffected. Also, the leaf proteomic study revealed thirty down-regulated and sixty-six up-regulated proteins. Abundances of proteins related to oxidative stress, carbohydrate metabolism, ion transport were mainly up-regulated while those of proteins involved in cell cycle and transcription/translation were mostly down-regulated. Proteins associated to protein metabolism were either down- or up-regulated. Considered altogether, we highlighted that S. canadensis exhibited a complex proteome response when experiencing a multicontaminated soil. Copyright © 2011 Elsevier B.V. All rights reserved.

  8. Species groups occupying different trophic levels respond differently to the invasion of semi-natural vegetation by Solidago canadensis

    NARCIS (Netherlands)

    Groot, de M.; Kleijn, D.; Jogan, N.

    2007-01-01

    We studied the impact of the invasive plant species Solidago canadensis on the species richness of vascular plants and the abundance, species richness and diversity of butterflies, hoverflies and carabid beetles in herbaceous semi-natural habitats near Ljubljana, Slovenia. The species groups were

  9. Physiological responses of eastern hemlock (Tsuga Canadensis) to biological control and silvicultural release: implications for hemlock restoration

    Science.gov (United States)

    Chelcy F. Miniat; David Zeitlow; Steven T. Brantley; Albert (Bud) Mayfield; Rusty Rhea; Robert Jetton; Paul.  Arnold

    2016-01-01

    The rapid loss of eastern hemlock (Tsuga canadensis) from riparian zones in the southern Appalachian Mountains due to Hemlock Woolly Adelgid (Adelgis tsugae, HWA) infestation has resulted in changes to watershed structure and function. Several restoration strategies have been proposed, including silvicultural treatments that increase incident light in forest...

  10. Testing Methods for Challenging the National Wetland Plant List: Using Tsuga canadensis (L.) Carr. (Eastern Hemlock) as a Case Study

    Science.gov (United States)

    2017-07-01

    frame were constructed based on GIS data (Table 1) and habitat descriptions of areas where T. canadensis was likely to occur, such as wooded swamps...6 2.1 Small study areas (100 km2) ......................................................................................... 6 2.1.1 Constructing a...Western Ecology Division are thanked for their procedural reviews and recommendations for improving the study design. Ms. Lindsey Lefebvre, Ms

  11. Toxoplasmosis in geese and detection of two new atypical Toxoplasma gondii strains from naturally infected Canada geese (Branta canadensis)

    Science.gov (United States)

    The protozoan Toxoplasma gondii infects virtually all warm-blooded animals, including birds, humans, livestock, and marine mammals. The consumption of raw or undercooked meat infected with T. gondii is considered an important source of infection in humans. Canada goose (Branta canadensis), the most ...

  12. Improving germination of red elm (Ulmus rubra), gray alder (Alnus incana), and buffaloberry (Shepherdia canadensis) seeds with gibberellic acid

    Science.gov (United States)

    Brenda Morales; Charles Barden; Cheryl Boyer; Jason Griffin; Lillian Fisher; Joni Thompson

    2012-01-01

    Red elm (Ulmus rubra), gray alder (Alnus incana), and buffaloberry (Shepherdia canadensis) are considered important plants for many Native American tribes in the United States. Native Americans use these 3 species for a variety of traditional and medicinal purposes. For example, red elm is still the preferred firewood for the cultural ceremonies of several tribes....

  13. Down regulation of APETALA3 homolog resulted in defect of floral structure critical to explosive pollen release in Cornus canadensis

    Institute of Scientific and Technical Information of China (English)

    Xiang Liu; Lu Li; Qiu-Yun (Jenny) Xiang

    2017-01-01

    In mature buds of the dwarf dogwood lineage (DW) of Cornus,petals and filaments form an "x"-like box containing mechanical energy from the filaments to allow explosive pollen dispersal.As a start to understand the molecular mechanisms responsible for the origin of this unique structure in Cornus,we cloned and characterized the sequences of APETALA3 (AP3) homologs from Cornus canadensis of the DW lineage and five other Cornus species,given the function of AP3 on petal and stamen development in Arabidopsis,and tested the function of CorcanAP3 using a stable Agrobacterium-mediated transformation system.The cloned CorAP3s (AP3-like genes in Cornus) were confirmed to belong to the euAP3 lineage.qRT-PCR analysis indicated strong increase of CorcanAP3 expression in floral buds of wildtype C.canadensis.A hairpin construct of CorcanAP3 was successfully introduced into wild type plants of C.canadensis,resulting in significant reduction of CorcanAP3 expression and abnormal floral development.The abnormal floral buds lost the "x" form and opened immaturely due to delay or retard of petal and stamen elongation and the push of style elongation.The results suggested CorcanAP3 may function to regulate the coordinated rate of development of petals and stamens in C.canadensis,necessary for the x-structure formation,although the exact molecular mechanism remains unclear.Comparison among six Comus species indicated a greater ratio of stamen to petal and style growth in C.canadensis,suggesting an evolutionary change of CorAP3 expression pattern in the DW lineage,leading to the greater growth of filaments to form the "x"-box.

  14. Description and life-cycle of Taenia lynciscapreoli sp. n. (Cestoda, Cyclophyllidea)

    Science.gov (United States)

    Haukisalmi, Voitto; Konyaev, Sergey; Lavikainen, Antti; Isomursu, Marja; Nakao, Minoru

    2016-01-01

    Abstract A new species of tapeworm, Taenia lynciscapreoli sp. n. (Cestoda, Cyclophyllidea), is described from the Eurasian lynx (Lynx lynx), the main definitive host, and the roe deer (Capreolus capreolus and Capreolus pygargus), the main intermediate hosts, from Finland and Russia (Siberia and the Russian Far East). The new species was found once also in the wolf (Canis lupus) and the Eurasian elk/moose (Alces alces), representing accidental definitive and intermediate hosts, respectively. The conspecificity of adult specimens and metacestodes of Taenia lynciscapreoli sp. n. in various host species and regions, and their distinction from related species of Taenia, was confirmed by partial nucleotide sequences of the mitochondrial cytochrome c oxidase subunit 1 gene. Morphologically, Taenia lynciscapreoli sp. n. can be separated unambiguously from all other species of Taenia by the shape of its large rostellar hooks, particularly the characteristically short, wide and strongly curved blade. If the large rostellar hooks are missing, Taenia lynciscapreoli may be separated from related species by a combination of morphological features of mature proglottids. It is suggested that Taenia lynciscapreoli has been present in published materials concerning the tapeworms of Lynx lynx and Lynx pardinus in Europe, but has been misidentified as Taenia pisiformis (Bloch, 1780). Taenia lynciscapreoli sp. n. has not been found in lynx outside the range of roe deer, suggesting a transmission pathway based on a specific predator–prey relationship. The present study applies a novel, simple approach to compare qualitative interspecific differences in the shape of rostellar hooks. PMID:27199592

  15. Strategic Integration of Multiple Bioinformatics Resources for System Level Analysis of Biological Networks.

    Science.gov (United States)

    D'Souza, Mark; Sulakhe, Dinanath; Wang, Sheng; Xie, Bing; Hashemifar, Somaye; Taylor, Andrew; Dubchak, Inna; Conrad Gilliam, T; Maltsev, Natalia

    2017-01-01

    Recent technological advances in genomics allow the production of biological data at unprecedented tera- and petabyte scales. Efficient mining of these vast and complex datasets for the needs of biomedical research critically depends on a seamless integration of the clinical, genomic, and experimental information with prior knowledge about genotype-phenotype relationships. Such experimental data accumulated in publicly available databases should be accessible to a variety of algorithms and analytical pipelines that drive computational analysis and data mining.We present an integrated computational platform Lynx (Sulakhe et al., Nucleic Acids Res 44:D882-D887, 2016) ( http://lynx.cri.uchicago.edu ), a web-based database and knowledge extraction engine. It provides advanced search capabilities and a variety of algorithms for enrichment analysis and network-based gene prioritization. It gives public access to the Lynx integrated knowledge base (LynxKB) and its analytical tools via user-friendly web services and interfaces. The Lynx service-oriented architecture supports annotation and analysis of high-throughput experimental data. Lynx tools assist the user in extracting meaningful knowledge from LynxKB and experimental data, and in the generation of weighted hypotheses regarding the genes and molecular mechanisms contributing to human phenotypes or conditions of interest. The goal of this integrated platform is to support the end-to-end analytical needs of various translational projects.

  16. Development of an HPLC post-column antioxidant assay for Solidago canadensis radical scavengers.

    Science.gov (United States)

    Marksa, Mindaugas; Radušienė, Jolita; Jakštas, Valdas; Ivanauskas, Liudas; Marksienė, Rūta

    2016-01-01

    The aim of this work was to modify and validate the post-column high-performance liquid chromatography (HPLC)-ABTS and DPPH methods for evaluating the antioxidant activity of the methanolic extracts of Solidago canadensis (Canadian goldenrod) leaves and flowers. Separation of the analytes was performed via the HPLC-PDA method on a YMC analytical column using a gradient elution program. Three compounds with antioxidant properties - chlorogenic acid, rutin and isoquercitrin - and two unidentified antioxidants were established. The research showed that the coil temperature regimes and loop length combinations influence the optimised post-column assay method for detecting the antioxidant activity of goldenrod radical scavengers. Investigations established that the temperature in the reaction coil was a substantial factor contributing to the signal strength of the analytes after reacting with the DPPH and ABTS radicals.

  17. New lupane triterpenoids from Solidago canadensis that inhibit the lyase activity of DNA polymerase beta.

    Science.gov (United States)

    Chaturvedula, V S Prakash; Zhou, Bing-Nan; Gao, Zhijie; Thomas, Shannon J; Hecht, Sidney M; Kingston, David G I

    2004-12-01

    Bioassay-directed fractionation of a methyl ethyl ketone extract of Solidago canadensis L. (Asteraceae), using an assay to detect the lyase activity of DNA polymerase beta, resulted in the isolation of the four new lupane triterpenoids 1-4 and the seven known compounds lupeol, lupeyl acetate, ursolic acid, cycloartenol, cycloartenyl palmitate, alpha-amyrin acetate, and stigmasterol. The structures of the new compounds were established as 3beta-(3R-acetoxyhexadecanoyloxy)-lup-20(29)-ene (1), 3beta-(3-ketohexadecanoyloxy)-lup-20(29)-ene (2), 3beta-(3R-acetoxyhexadecanoyloxy)-29-nor-lupan-20-one (3), and 3beta-(3-hetohexadecanoyloxy)-29-nor-lupan-20-one (4), respectively, on the basis of extensive 1D and 2D NMR spectroscopic interpretation and chemical modification studies. All 11 compounds were inhibitory to the lyase activity of DNA polymerase beta.

  18. Echinococcus canadensis, E. borealis, and E. intermedius. What's in a name?

    Science.gov (United States)

    Lymbery, Alan J; Jenkins, Emily J; Schurer, Janna M; Thompson, R C Andrew

    2015-01-01

    The phylogenetic relationships of the G6, G7, G8, and G10 genotypes of Echinococcus granulosus are well defined, but their taxonomic status is currently unresolved. We apply an evolutionary species concept to infer that the G6 and G7 genotypes represent a single species that is different to both the G8 and G10 genotypes, and that the G8 and G10 genotypes are also on different evolutionary trajectories and, therefore, should be regarded as separate species. The names Echinococcus intermedius, Echinococcus canadensis, and Echinococcus borealis have been previously proposed for these three taxa (G6/7, G10 and G8, respectively) and we argue that it may be appropriate to resurrect these names. The correct delimitation and formal recognition of species of Echinococcus may have important veterinary and public health consequences. Copyright © 2014 Elsevier Ltd. All rights reserved.

  19. A Review of Hypothesized Determinants Associated with Bighorn Sheep (Ovis canadensis Die-Offs

    Directory of Open Access Journals (Sweden)

    David S. Miller

    2012-01-01

    Full Text Available Multiple determinants have been hypothesized to cause or favor disease outbreaks among free-ranging bighorn sheep (Ovis canadensis populations. This paper considered direct and indirect causes of mortality, as well as potential interactions among proposed environmental, host, and agent determinants of disease. A clear, invariant relationship between a single agent and field outbreaks has not yet been documented, in part due to methodological limitations and practical challenges associated with developing rigorous study designs. Therefore, although there is a need to develop predictive models for outbreaks and validated mitigation strategies, uncertainty remains as to whether outbreaks are due to endemic or recently introduced agents. Consequently, absence of established and universal explanations for outbreaks contributes to conflict among wildlife and livestock stakeholders over land use and management practices. This example illustrates the challenge of developing comprehensive models for understanding and managing wildlife diseases in complex biological and sociological environments.

  20. Prevalence of agglutinating antibodies to Toxoplasma gondii and Sarcocystis neurona in beavers (Castor canadensis) from Massachusetts

    Science.gov (United States)

    Jordan, C.N.; Kaur, T.; Koenen, K.; DeStefano, S.; Zajac, A.M.; Lindsay, D.S.

    2005-01-01

    The present study examined the seroprevalence of Toxoplasma gondii and Sarcocystls neurona in a population of beavers (Castor canadensis) from Massachusetts. Sixty-two blood samples were collected during the field seasons over 3 consecutive years from different animals. Blood was collected onto filter paper and shipped to the Department of Biomedical Sciences, Virginia Tech, Blacksburg, Virginia, for parasite testing. The samples were tested at dilutions of 1:25, 1:50, and 1:100 against each parasite antigen by modified agglutination tests to determine whether antibodies to either parasite were present in the blood. Six of 62 samples (10%) were positive for T. gondii, with 2 samples having titers of 1:25 and 4 having titers of 1:50. Four of 62 samples (6%) were positive for S. neurona, with 2 samples having titers of 1:25 and 2 having titers of 1:50. ?? American Society of Pathologists 2005.

  1. Antifungal Activity and Composition of Essential Oils of Conyza canadensis Herbs and Roots

    Directory of Open Access Journals (Sweden)

    Katalin Veres

    2012-01-01

    Full Text Available Essential oils from herbs and roots of Conyza canadensis (horseweed, collected in Hungary, were obtained by hydrodistillation. The chemical compositions of the oils were analysed by combination of GC and GC/MS. The major constituent of the oil obtained from the aerial parts of horseweed was limonene (78%, while the main component of root oil was 2Z,8Z-matricaria ester. The antimicrobial activities of the oils were tested on Gram-positive (Enterococcus faecalis, Staphylococcus aureus, and Streptococcus pyogenes, Gram-negative (Escherichia coli, Pseudomonas aeruginosa bacteria, reference fungal strains, and fungal strains isolated from patients (Candida, Cryptococcus, Trichophyton, Rhodotorula, and Aspergillus by agar disc diffusion and broth dilution methods. None of the oils showed any activity against the tested bacterial strains, but exhibited moderate-to-strong activity against all fungi with the only exception of A. fumigatus. The highest zone of inhibition was observed in case of Cryptococcus neoformans and Trichophyton interdigitalis

  2. [Isolation and structure elucidation of further new saponins from Solidago canadensis].

    Science.gov (United States)

    Reznicek, G; Jurenitsch, J; Freiler, M; Korhammer, S; Haslinger, E; Hiller, K; Kubelka, W

    1992-02-01

    Four new main saponins (canadensis-saponins 5-8) (compounds 5-8) were isolated from Solidago canadensis L. (Asteraceae). Using GC/MS, FAB-MS, and mainly 2D-NMR techniques their structures were identified as 3-O-[beta-D-glucopyranosyl(1----3)-beta-D- glucopyranosyl]-28-O-[beta-D-galactopyranosyl(1----2)-alpha-L- rhamnopyranosyl-(1----3)-beta-D-xylopyranosyl-(1----4)-[beta-D- xylopyranosyl-(1----3)]-alpha-L-rhamnopyranosyl-(1----2)-[beta-D-apio -D- furanosyl-(1----3)]-beta-D-6-deoxyglucopyranosyl-(1----)]-bayog enin(5),3-O- [beta-D-glucopyranosyl-(1----3)-beta-D-glucopyranosyl]-28-O-[beta-D- galactopyranosyl-(1----2)-alpha-L-rhamnopyranosyl-(1----3)-beta-D- xylopyranosyl-(1----4)-[beta-D-xylopyranosyl-(1----3)]-alpha-L- rhamnopyranosyl-(1----2)-[beta-D-apio-D-furanosyl-(1----3)]- arabinopyranosyl-(1----)]bayogenin(6),3-O-[beta-D-glucopy ran osyl-(1----3)- beta-D-glucopyranosyl]-28-O-[beta-D-galactopyranosyl-(1----2)- alpha-L-rhamnopyranosyl-(1----3)-beta-D-xylopyranosyl-(1----4)-[beta-D- xylopyranosyl-(1----3)]-alpha-L-rhamnopyranosyl-(1----2)-[alpha-L- rhamnopyranosyl-(1----3)]-beta-D-6-deoxyglucopyranosyl-(1----)]-++ +bayogenin (7), and 3-O-[beta-D-glucopyranosyl-(1----3)-beta-D-glucopyranosyl]-28-[O- beta-D-galactopyranosyl-(1----2)-alpha-L-rhamnopyranosyl-(1----3)-beta-D - xylopyranosyl-(1----4)-[beta-D-xylopyranosyl-(1----3)]-alpha-L- rhamnopyranosyl-(1----2)-[alpha-L-rhamnopyranosyl-(1----3)]arabinopyr anosyl - (1----)[-bayogenin (8).

  3. Accumulation and release of {sup 241}Am by a macrophyte of the Yenisei River (Elodea canadensis)

    Energy Technology Data Exchange (ETDEWEB)

    Bolsunovsky, A. [Institute of Biophysics, Siberian Branch of the Russian Academy of Sciences, Krasnoyarsk 660036 (Russian Federation)]. E-mail: radecol@ibp.ru; Zotina, T. [Institute of Biophysics, Siberian Branch of the Russian Academy of Sciences, Krasnoyarsk 660036 (Russian Federation); Bondareva, L. [Institute of Biophysics, Siberian Branch of the Russian Academy of Sciences, Krasnoyarsk 660036 (Russian Federation)

    2005-07-01

    The source of radioactive contamination of the Yenisei River floodplain, including contamination with transuranic elements, is the Mining-and-Chemical Combine of the Russian Ministry of Atomic Energy, which has for many years been producing weapons-grade plutonium. Transuranic elements have been detected not only in the soil and sediment of the river but also in the biomass of aquatic plants. This work is an investigation of accumulation and release of {sup 241}Am by a submerged macrophyte of the Yenisei River (Elodea canadensis) in laboratory experiments. In 2000-2003, laboratory experiments were carried out with biomass of E. canadensis Mich. and filtered river water. The samples were collected from the Yenisei River upstream of the discharge of the Combine's radioactive effluent. The experiments showed that {sup 241}Am is accumulated by Elodea biomass: the activity concentration of {sup 241}Am can reach 3280 {+-} 240 Bq/g, with the concentration factor for {sup 241}Am 16 600 {+-} 2200 l/kg. Results of chemical fractionation have proved that in the course of {sup 241}Am accumulation by Elodea biomass, {sup 241}Am tightly bound to biomass increases from 11% to 27% of the total {sup 241}Am in the biomass. Release of {sup 241}Am from the decaying Elodea biomass has been evaluated experimentally. By the end of the experiment (lasting up to 127 days), the Elodea plants had lost up to 65% of their initial {sup 241}Am activity and the rate of {sup 241}Am release into the water environment reached 23 Bq/day.

  4. Uptake of metals and metalloids by Conyza canadensis L. from a thermoelectric power plant landfill

    Directory of Open Access Journals (Sweden)

    Vukojević Vesna

    2016-01-01

    Full Text Available Fourteen metals and metalloids were determined in Conyza canadensis L. harvested from the fly ash landfill of the thermoelectric power plant “Kolubara” (Serbia. Fly ash samples were collected together with the plant samples and subjected to sequential extraction according to the three-step sequential extraction scheme proposed by the Community Bureau of Reference (BCR; now the Standards, Measurements and Testing Program. The contents of metals and metalloids were determined by inductively coupled plasma optical emission spectrometry (ICP-OES in plant root and the aboveground part and correlated with their contents in the fly ash samples. The bioconcentration factor (BCF and translocation factors (TF were calculated to access uptake of metals from fly ash and their translocation to the aboveground part. Results regarding As revealed that fly ash samples in the proximity of the active cassette had higher amounts of the element. Principal component analysis (PCA showed that As had no impact on the classification of plant parts. BCF for As ranged from 1.44 to 23.8 and varied, depending on the investigated area; TF for As ranged from 0.43 to 2.61, indicating that the plant translocated As from root to shoot. In addition to As, Conyza canadensis L. exhibited efficient uptake of other metals from fly ash. According to the calculated BCF and TF, the plant retained Al, Fe and Cr in the root and translocated Zn, Cd, Cu and As from root to shoot in the course of the detoxifying process. [Projekat Ministarstva nauke Republike Srbije, br. 172030 i br. 172017

  5. [Early sibling aggression in mammals and its hormonal correlates].

    Science.gov (United States)

    Antonevich, A L; Naĭdenko, S V

    2007-01-01

    Early sibling aggression is a widespread phenomenon in birds. Ornithologists distinguish species with "obligate" and "facultative" siblicide. Sibling aggression was described in some mammal species: the domestic pig (Sus scrofa), the spotted hyena (Crocuta crocuta), the Eurasian lynx (Lynx lynx), and the Iberian lynx (L. par-dinus). In all of them, sibling aggression corresponds well with the "facultative" siblicide model in birds. Sibling aggression was observed at the age of 36-64 days in both lynx species. It is usually restricted to a single fight and can change the hierarchical structure and growth rate of the kittens. In the spotted hyena and the domestic pig, the frequency and intensity of aggressive interactions between siblings are strongest during the first days of postnatal ontogeny and then decrease gradually. The newborns of these species are much developed than newborn lynx kittens. Usually adult lynx females, in contrast to hyenas and pigs, try to stop sibling fights. This is probably related to the larger parental investment at the time of the fight in lynxes (a kitten's body weight is about 10% of the mother's) than in pigs (0.5%) and hyenas (1.9%). Sibling aggression in spotted hyenas could be related to the high level of androstenedione and is not related to testosterone concentration. In the Eurasian lynx, female sibs attack their littermates slightly more often than male sibs do, and sibling aggression is not testosterone-dependent. Hormones secreted by the adrenal glands may play an important role in this phenomenon. The data available so far, however, do not positively confirm the presence of hormonal trigger effects in mammal sibling aggression.

  6. Correlations between the anatomical traits of Gymnocladus canadensis Lam. in heartwood and sapwood of early- and latewood zones of growth rings

    OpenAIRE

    Jokanović Dušan; Vilotić Dragica; Mitrović Suzana; Miljković Danijela; Rebić Milan; Stanković Dragica; Nikolić Vesna

    2015-01-01

    This paper shows correlations between vessel characteristics and differences in growth-ring width in heartwood and sapwood. Analyzed samples were from an iron-wood tree (Gymnocladus canadensis Lam.) that grew in the Mužljanski Rit area, of the Srpska Crnja municipality in Serbia. According to previous research, it was deduced that Gymnocladus canadensis Lam. belongs to ring-porous species with big vessel lumen in the earlywood zone and thicker cell walls in...

  7. Comparative analysis of the anatomical structure of heartwood and sapwood selected Gymnocladus canadensis Lam. trees in Srpska Crnja

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    Vilotić Dragica

    2011-01-01

    Full Text Available This paper shows the results obtained from the study of the macroscopic-microscopic structure (capillary system in the growth stem of Gymnocladus canadensis Lam. originating from North America, which grows in “Muzljanski rit” in the area of Srpska Crnja. Gymnocladus canadensis Lam. falls under the ring-porous species according to its porosity, with large tracheas in its early zone. The early zone trachea lumens, contained in the sapwood, reach dimensions of up to 160 μm, while early zone trachea lumens in the growth stem rings of the sapwood reach dimensions of up to 120 μm. Examination of the microscopic structure of this tree show good properties of the tree.

  8. Decomposition of Phragmites australis litter retarded by invasive Solidago canadensis in mixtures: an antagonistic non-additive effect

    OpenAIRE

    Zhang, Ling; Zhang, Yaojun; Zou, Jianwen; Siemann, Evan

    2014-01-01

    Solidago canadensis is an aggressive invader in China. Solidago invasion success is partially attributed to allelopathic compounds release and more benefits from AM fungi, which potentially makes the properties of Solidago litter different from co-occurring natives. These properties may comprehensively affect litter decomposition of co-occurring natives. We conducted a field experiment to examine litter mixing effects in a Phragmites australis dominated community invaded by Solidago in southe...

  9. Cadmium uptake in Elodea canadensis leaves and its interference with extra- and intra-cellular pH.

    Science.gov (United States)

    Javed, M T; Lindberg, S; Greger, M

    2014-05-01

    This study investigated cadmium (Cd) uptake in Elodea canadensis shoots under different photosynthetic conditions, and its effects on internal (cytosolic) and external pH. The plants were grown under photosynthetic (light) or non-photosynthetic (dark or in the presence of a photosynthetic inhibitor) conditions in the presence or absence of CdCl2 (0.5 μm) in a medium with a starting pH of 5.0. The pH-sensitive dye BCECF-AM was used to monitor cytosolic pH changes in the leaves. Cadmium uptake in protoplasts and leaves was detected with a Cd-specific fluorescent dye, Leadmium Green AM, and with atomic absorption spectrophotometry. During cultivation for 3 days without Cd, shoots of E. canadensis increased the pH of the surrounding water, irrespective of the photosynthetic conditions. This medium alkalisation was higher in the presence of CdCl2 . Moreover, the presence of Cd also increased the cation exchange capacity of the shoots. The total Cd uptake by E. canadensis shoots was independent of photosynthetic conditions. Protoplasts from plants exposed to 0.5 μm CdCl2 for 3 days did not exhibit significant change in cytosolic [Cd(2+)] or pH. However, exposure to CdCl2 for 7 days resulted in increased cytosolic [Cd(2+) ] as well as pH. The results suggest that E. canadensis subjected to a low CdCl2 concentration initially sequesters Cd into the apoplasm, but under prolonged exposure, Cd is transported into the cytosol and subsequently alters cytosolic pH. In contrast, addition of 10-50 μm CdCl2 directly to protoplasts resulted in immediate uptake of Cd into the cytosol. © 2013 German Botanical Society and The Royal Botanical Society of the Netherlands.

  10. Expansion for the Brachylophosaurus canadensis Collagen I Sequence and Additional Evidence of the Preservation of Cretaceous Protein.

    Science.gov (United States)

    Schroeter, Elena R; DeHart, Caroline J; Cleland, Timothy P; Zheng, Wenxia; Thomas, Paul M; Kelleher, Neil L; Bern, Marshall; Schweitzer, Mary H

    2017-02-03

    Sequence data from biomolecules such as DNA and proteins, which provide critical information for evolutionary studies, have been assumed to be forever outside the reach of dinosaur paleontology. Proteins, which are predicted to have greater longevity than DNA, have been recovered from two nonavian dinosaurs, but these results remain controversial. For proteomic data derived from extinct Mesozoic organisms to reach their greatest potential for investigating questions of phylogeny and paleobiology, it must be shown that peptide sequences can be reliably and reproducibly obtained from fossils and that fragmentary sequences for ancient proteins can be increasingly expanded. To test the hypothesis that peptides can be repeatedly detected and validated from fossil tissues many millions of years old, we applied updated extraction methodology, high-resolution mass spectrometry, and bioinformatics analyses on a Brachylophosaurus canadensis specimen (MOR 2598) from which collagen I peptides were recovered in 2009. We recovered eight peptide sequences of collagen I: two identical to peptides recovered in 2009 and six new peptides. Phylogenetic analyses place the recovered sequences within basal archosauria. When only the new sequences are considered, B. canadensis is grouped more closely to crocodylians, but when all sequences (current and those reported in 2009) are analyzed, B. canadensis is placed more closely to basal birds. The data robustly support the hypothesis of an endogenous origin for these peptides, confirm the idea that peptides can survive in specimens tens of millions of years old, and bolster the validity of the 2009 study. Furthermore, the new data expand the coverage of B. canadensis collagen I (a 33.6% increase in collagen I alpha 1 and 116.7% in alpha 2). Finally, this study demonstrates the importance of reexamining previously studied specimens with updated methods and instrumentation, as we obtained roughly the same amount of sequence data as the

  11. Characterisation of Antigen B Protein Species Present in the Hydatid Cyst Fluid of Echinococcus canadensis G7 Genotype.

    Science.gov (United States)

    Folle, Ana Maite; Kitano, Eduardo S; Lima, Analía; Gil, Magdalena; Cucher, Marcela; Mourglia-Ettlin, Gustavo; Iwai, Leo K; Rosenzvit, Mara; Batthyány, Carlos; Ferreira, Ana María

    2017-01-01

    The larva of cestodes belonging to the Echinococcus granulosus sensu lato (s.l.) complex causes cystic echinococcosis (CE). It is a globally distributed zoonosis with significant economic and public health impact. The most immunogenic and specific Echinococcus-genus antigen for human CE diagnosis is antigen B (AgB), an abundant lipoprotein of the hydatid cyst fluid (HF). The AgB protein moiety (apolipoprotein) is encoded by five genes (AgB1-AgB5), which generate mature 8 kDa proteins (AgB8/1-AgB8/5). These genes seem to be differentially expressed among Echinococcus species. Since AgB immunogenicity lies on its protein moiety, differences in AgB expression within E. granulosus s.l. complex might have diagnostic and epidemiological relevance for discriminating the contribution of distinct species to human CE. Interestingly, AgB2 was proposed as a pseudogene in E. canadensis, which is the second most common cause of human CE, but proteomic studies for verifying it have not been performed yet. Herein, we analysed the protein and lipid composition of AgB obtained from fertile HF of swine origin (E. canadensis G7 genotype). AgB apolipoproteins were identified and quantified using mass spectrometry tools. Results showed that AgB8/1 was the major protein component, representing 71% of total AgB apolipoproteins, followed by AgB8/4 (15.5%), AgB8/3 (13.2%) and AgB8/5 (0.3%). AgB8/2 was not detected. As a methodological control, a parallel analysis detected all AgB apolipoproteins in bovine fertile HF (G1/3/5 genotypes). Overall, E. canadensis AgB comprised mostly AgB8/1 together with a heterogeneous mixture of lipids, and AgB8/2 was not detected despite using high sensitivity proteomic techniques. This endorses genomic data supporting that AgB2 behaves as a pseudogene in G7 genotype. Since recombinant AgB8/2 has been found to be diagnostically valuable for human CE, our findings indicate that its use as antigen in immunoassays could contribute to false negative results in

  12. Characterisation of Antigen B Protein Species Present in the Hydatid Cyst Fluid of Echinococcus canadensis G7 Genotype

    Science.gov (United States)

    Folle, Ana Maite; Kitano, Eduardo S.; Lima, Analía; Gil, Magdalena; Cucher, Marcela; Mourglia-Ettlin, Gustavo; Iwai, Leo K.; Rosenzvit, Mara; Batthyány, Carlos

    2017-01-01

    The larva of cestodes belonging to the Echinococcus granulosus sensu lato (s.l.) complex causes cystic echinococcosis (CE). It is a globally distributed zoonosis with significant economic and public health impact. The most immunogenic and specific Echinococcus-genus antigen for human CE diagnosis is antigen B (AgB), an abundant lipoprotein of the hydatid cyst fluid (HF). The AgB protein moiety (apolipoprotein) is encoded by five genes (AgB1-AgB5), which generate mature 8 kDa proteins (AgB8/1-AgB8/5). These genes seem to be differentially expressed among Echinococcus species. Since AgB immunogenicity lies on its protein moiety, differences in AgB expression within E. granulosus s.l. complex might have diagnostic and epidemiological relevance for discriminating the contribution of distinct species to human CE. Interestingly, AgB2 was proposed as a pseudogene in E. canadensis, which is the second most common cause of human CE, but proteomic studies for verifying it have not been performed yet. Herein, we analysed the protein and lipid composition of AgB obtained from fertile HF of swine origin (E. canadensis G7 genotype). AgB apolipoproteins were identified and quantified using mass spectrometry tools. Results showed that AgB8/1 was the major protein component, representing 71% of total AgB apolipoproteins, followed by AgB8/4 (15.5%), AgB8/3 (13.2%) and AgB8/5 (0.3%). AgB8/2 was not detected. As a methodological control, a parallel analysis detected all AgB apolipoproteins in bovine fertile HF (G1/3/5 genotypes). Overall, E. canadensis AgB comprised mostly AgB8/1 together with a heterogeneous mixture of lipids, and AgB8/2 was not detected despite using high sensitivity proteomic techniques. This endorses genomic data supporting that AgB2 behaves as a pseudogene in G7 genotype. Since recombinant AgB8/2 has been found to be diagnostically valuable for human CE, our findings indicate that its use as antigen in immunoassays could contribute to false negative results in

  13. The first report of human-derived G10 genotype of Echinococcus canadensis in China and possible sources and routes of transmission.

    Science.gov (United States)

    Yang, Dong; Zhang, Tiemin; Zeng, Zhaolin; Zhao, Wei; Zhang, Weizhe; Liu, Aiqin

    2015-10-01

    Cystic echinococcosis (CE) is one of the most important parasitic zoonoses. 10 distinct genotypes, designated G1-G10 genotypes of Echinococcus granulosus sensu lato (s.l.), have been split into 4 species: Echinococcus granulosus sensu stricto (s.s.) (G1-G3), Echinococcus equinus (G4), Echinococcus ortleppi (G5) and Echinococcus canadensis (G6-G10); Echinococcus felidis has also been suggested as a sister taxon of E. granulosus s.s. recently. Four genotypes belonging to two species (G1 and G3 genotypes of E. granulosus s.s., and G6 and G7 genotypes of E. canadensis) have been identified in humans and animals in China. In the present study, a human-derived hydatid cyst from a patient in northeastern China's Heilongjiang Province was identified as G10 genotype of E. canadensis based on mitochondrial cytochrome c oxidase subunit I (cox1), cytochrome b (cytb) and NADH dehydrogenase subunit 1 (nad1) genes. Homology analysis showed the cox1 gene sequence of G10 genotype of E. canadensis had 100% homology with those from wolves in Mongolia and from a moose in Russia. The cytb and nad1 gene sequences of G10 genotype of E. canadensis had 100% homology with the complete sequence from a moose in Finland at an amino acid level. The infection source of the CE patient here might be primarily attributable to wolves. This is the first report of G10 genotype of E. canadensis in a human in China. The finding of G10 genotype of E. canadensis in China shows that this genotype possibly has a more wide geographical distribution than previously considered. Copyright © 2015 Elsevier Ireland Ltd. All rights reserved.

  14. Proteome analysis reveals an energy-dependent central process for Populus×canadensis seed germination.

    Science.gov (United States)

    Zhang, Hong; Zhou, Ke-Xin; Wang, Wei-Qing; Liu, Shu-Jun; Song, Song-Quan

    2017-06-01

    Poplar (Populus×canadensis) seeds rapidly germinated in darkness at 10, 15, and 20°C and reached 50% seed germination after about 22, 4.5, and 3.5h, respectively. Germination of poplar seeds was markedly inhibited by abscisic acid (ABA) at 50μM and cycloheximide (CHX) at 100μM, and these inhibitive roles were temperature-dependent. In the present study, mature poplar seeds were used to investigate the differentially changed proteome of seeds germinating in water, ABA, and CHX. A total of 130 protein spots showed a significant change (1.5-fold increase/decrease, Pgermination of poplar seeds is closely related with the increase in those proteins involved in amino acid and lipid metabolism, the tricarboxylic acid cycle and pentose phosphate pathway, protein synthesis and destination, cell defense and rescue, and degradation of storage proteins. ABA and CHX inhibit the germination of poplar seeds by decreasing the protein abundance associated with protein proteolysis, protein folding, and storage proteins. We conclude that poplar seed germination is an energy-dependent active process, and is accompanied by increasing amino acid activation, protein synthesis and destination, as well as cell defense and rescue, and degradation of storage proteins. Copyright © 2017 Elsevier GmbH. All rights reserved.

  15. Evidence for enhanced mutualism hypothesis: Solidago canadensis plants from regular soils perform better.

    Science.gov (United States)

    Sun, Zhen-Kai; He, Wei-Ming

    2010-11-03

    The important roles of plant-soil microbe interactions have been documented in exotic plant invasion, but we know very little about how soil mutualists enhance this process (i.e. enhanced mutualism hypothesis). To test this hypothesis we conducted two greenhouse experiments with Solidago canadensis (hereafter Solidago), an invasive forb from North America, and Stipa bungeana (hereafter Stipa), a native Chinese grass. In a germination experiment, we found soil microbes from the rhizospheres of Solidago and Stipa exhibited much stronger facilitative effects on emergence of Solidago than that of Stipa. In a growth and competition experiment, we found that soil microbes strongly facilitated Solidago to outgrow Stipa, and greatly increased the competitive effects of Solidago on Stipa but decreased the competitive effects of Stipa on Solidago. These findings from two experiments suggest that in situ soil microbes enhance the recruitment potential of Solidago and its ability to outcompete native plants, thereby providing strong evidence for the enhanced mutualism hypothesis. On the other hand, to some extent this outperformance of Solidago in the presence of soil microbes seems to be unbeneficial to control its rapid expansion, particularly in some ranges where this enhanced mutualism dominates over other mechanisms.

  16. Evidence for enhanced mutualism hypothesis: Solidago canadensis plants from regular soils perform better.

    Directory of Open Access Journals (Sweden)

    Zhen-Kai Sun

    Full Text Available The important roles of plant-soil microbe interactions have been documented in exotic plant invasion, but we know very little about how soil mutualists enhance this process (i.e. enhanced mutualism hypothesis. To test this hypothesis we conducted two greenhouse experiments with Solidago canadensis (hereafter Solidago, an invasive forb from North America, and Stipa bungeana (hereafter Stipa, a native Chinese grass. In a germination experiment, we found soil microbes from the rhizospheres of Solidago and Stipa exhibited much stronger facilitative effects on emergence of Solidago than that of Stipa. In a growth and competition experiment, we found that soil microbes strongly facilitated Solidago to outgrow Stipa, and greatly increased the competitive effects of Solidago on Stipa but decreased the competitive effects of Stipa on Solidago. These findings from two experiments suggest that in situ soil microbes enhance the recruitment potential of Solidago and its ability to outcompete native plants, thereby providing strong evidence for the enhanced mutualism hypothesis. On the other hand, to some extent this outperformance of Solidago in the presence of soil microbes seems to be unbeneficial to control its rapid expansion, particularly in some ranges where this enhanced mutualism dominates over other mechanisms.

  17. Population genetics and adaptation to climate along elevation gradients in invasive Solidago canadensis.

    Science.gov (United States)

    Moran, Emily V; Reid, Andrea; Levine, Jonathan M

    2017-01-01

    Gene flow between populations may either support local adaptation by supplying genetic variation on which selection may act, or counteract it if maladapted alleles arrive faster than can be purged by selection. Although both such effects have been documented within plant species' native ranges, how the balance of these forces influences local adaptation in invasive plant populations is less clear, in part because introduced species often have lower genetic variation initially but also tend to have good dispersal abilities. To evaluate the extent of gene flow and adaptation to local climate in invasive populations of Solidago canadensis, and the implications of this for range expansion, we compared population differentiation at microsatellite and chloroplast loci for populations across Switzerland and assessed the effect of environmental transfer distance using common gardens. We found that while patterns of differentiation at neutral genetic markers suggested that populations are connected through extensive pollen and seed movement, common-garden plants nonetheless exhibited modest adaptation to local climate conditions. Growth rate and flower production declined with climatic distance from a plant's home site, with clones from colder home sites performing better at or above the range limit. Such adaptation in invasive species is likely to promote further spread, particularly under climate change, as the genotypes positioned near the range edge may be best able to take advantage of lengthening growing seasons to expand the range.

  18. In-vitro effect of flavonoids from Solidago canadensis extract on glutathione S-transferase.

    Science.gov (United States)

    Apáti, Pál; Houghton, Peter J; Kite, Geoffrey; Steventon, Glyn B; Kéry, Agnes

    2006-02-01

    Solidago canadensis is typical of a flavonoid-rich herb and the effect of an aqueous ethanol extract on glutathione-S-transferase (GST) activity using HepG2 cells was compared with those of the flavonol quercetin and its glycosides quercitrin and rutin, found as major constituents. The composition of the extract was determined by HPLC and rutin was found to be the major flavonoidal component of the extract. Total GST activity was assessed using 1-chloro-2,4-dinitrobenzene as a substrate. The glycosides rutin and quercitrin gave dose-dependent increases in GST activity, with a 50% and 24.5% increase at 250 mM, respectively, while the aglycone quercetin inhibited the enzyme by 30% at 250 mM. The total extract of the herb gave an overall dose-dependent increase, the fractions corresponding to the flavonoids showed activating effects while those containing caffeic acid derivatives were inhibitory. The activity observed corresponds to that reported for similar compounds in-vivo using rats, thus the HepG2 cell line could serve as a more satisfactory method of assessing the effects of extracts and compounds on GST.

  19. Observation of sandhill cranes' (Grus canadensis) flight behavior in heavy fog

    Science.gov (United States)

    Kirsch, Eileen M.; Wellik, Mike J.; Suarez, Manuel J.; Diehl, Robert H.; Lutes, Jim; Woyczik, Wendy; Krapfl, Jon; Sojda, Richard S.

    2015-01-01

    The behaviors of birds flying in low visibility conditions remain poorly understood. We had the opportunity to monitor Sandhill Cranes (Grus canadensis) flying in heavy fog with very low visibility during a comprehensive landscape use study of refuging cranes in the Horicon Marsh in southeastern Wisconsin. As part of the study, we recorded flight patterns of cranes with a portable marine radar at various locations and times of day, and visually counted cranes as they departed the roost in the morning. We compared flight patterns during a fog event with those recorded during clear conditions. In good visibility, cranes usually departed the night roost shortly after sunrise and flew in relatively straight paths toward foraging areas. In fog, cranes departed the roost later in the day, did not venture far from the roost, engaged in significantly more circling flight, and returned to the roost site rather than proceeding to foraging areas. We also noted that compared to mornings with good visibility, cranes flying in fog called more frequently than usual. The only time in this 2-year study that observers heard young of the year calling was during the fog event. The observed behavior of cranes circling and lingering in an area while flying in poor visibility conditions suggests that such situations may increase chances of colliding with natural or anthropogenic obstacles in the vicinity.

  20. SURVEY OF GROSS AND HISTOPATHOLOGIC FINDINGS IN TWO WINTERING SUBPOPULATIONS OF SANDHILL CRANES ( ANTIGONE CANADENSIS).

    Science.gov (United States)

    Hensel, Martha; Bertram, Miranda; Rech, Raquel; Hamer, Gabriel L; Hamer, Sarah A

    2018-01-01

    :  Sandhill Cranes ( Antigone canadensis) of the midcontinent population (MCP) and Rocky Mountain population (RMP) are migratory game birds with stable populations that travel between Canada and the southern US and Mexico. In the winters of 2012-14, we performed gross and histologic examinations of 43 hunter-harvested Sandhill Cranes in Texas (MCP) and New Mexico (RMP) to assess the impact of disease on populations. Lesions were significantly more common in the MCP relative to the RMP, likely reflecting differential environmental exposure to pathogens and parasites. Grossly, liver nodules and esophageal granulomas were present in 8-39% of birds. In feces from over half of birds, we found coccidian oocysts with mitochondrial gene sequences identical to those of Eimeria gruis and Eimeria reichenowi previously obtained from sympatric Whooping Cranes ( Grus americana). Over one-quarter of birds had liver and cardiac lesions suggestive of disseminated visceral coccidiosis. We documented proliferative colitis due to Cryptosporidium in a wild Sandhill Crane. Additionally, several endoparasites were found in histologic sections from several cranes, including a bird with respiratory trematodiasis and two birds with Tetrameres sp. in the proventriculus associated with ductal ectasia. In addition to describing lesions and parasites that impact Sandhill Crane health, these pathology data may also be relevant for the conservation of endangered Whooping Cranes using a surrogate species approach.

  1. Biochemometrics to Identify Synergists and Additives from Botanical Medicines: A Case Study with Hydrastis canadensis (Goldenseal).

    Science.gov (United States)

    Britton, Emily R; Kellogg, Joshua J; Kvalheim, Olav M; Cech, Nadja B

    2018-03-23

    A critical challenge in the study of botanical natural products is the difficulty of identifying multiple compounds that may contribute additively, synergistically, or antagonistically to biological activity. Herein, it is demonstrated how combining untargeted metabolomics with synergy-directed fractionation can be effective toward accomplishing this goal. To demonstrate this approach, an extract of the botanical goldenseal ( Hydrastis canadensis) was fractionated and tested for its ability to enhance the antimicrobial activity of the alkaloid berberine (4) against the pathogenic bacterium Staphylococcus aureus. Bioassay data were combined with untargeted mass spectrometry-based metabolomics data sets (biochemometrics) to produce selectivity ratio (SR) plots, which visually show which extract components are most strongly associated with the biological effect. Using this approach, the new flavonoid 3,3'-dihydroxy-5,7,4'-trimethoxy-6,8- C-dimethylflavone (29) was identified, as were several flavonoids known to be active. When tested in combination with 4, 29 lowered the IC 50 of 4 from 132.2 ± 1.1 μM to 91.5 ± 1.1 μM. In isolation, 29 did not demonstrate antimicrobial activity. The current study highlights the importance of fractionation when utilizing metabolomics for identifying bioactive components from botanical extracts and demonstrates the power of SR plots to help merge and interpret complex biological and chemical data sets.

  2. Metabolomic Profiling of the Nectars of Aquilegia pubescens and A. Canadensis.

    Directory of Open Access Journals (Sweden)

    Christos Noutsos

    Full Text Available To date, variation in nectar chemistry of flowering plants has not been studied in detail. Such variation exerts considerable influence on pollinator-plant interactions, as well as on flower traits that play important roles in the selection of a plant for visitation by specific pollinators. Over the past 60 years the Aquilegia genus has been used as a key model for speciation studies. In this study, we defined the metabolomic profiles of flower samples of two Aquilegia species, A. Canadensis and A. pubescens. We identified a total of 75 metabolites that were classified into six main categories: organic acids, fatty acids, amino acids, esters, sugars, and unknowns. The mean abundances of 25 of these metabolites were significantly different between the two species, providing insights into interspecies variation in floral chemistry. Using the PlantSEED biochemistry database, we found that the majority of these metabolites are involved in biosynthetic pathways. Finally, we explored the annotated genome of A. coerulea, using the PlantSEED pipeline and reconstructed the metabolic network of Aquilegia. This network, which contains the metabolic pathways involved in generating the observed chemical variation, is now publicly available from the DOE Systems Biology Knowledge Base (KBase; http://kbase.us.

  3. Use of exposure history to identify patterns of immunity to pneumonia in bighorn sheep (Ovis canadensis.

    Directory of Open Access Journals (Sweden)

    Raina K Plowright

    Full Text Available Individual host immune responses to infectious agents drive epidemic behavior and are therefore central to understanding and controlling infectious diseases. However, important features of individual immune responses, such as the strength and longevity of immunity, can be challenging to characterize, particularly if they cannot be replicated or controlled in captive environments. Our research on bighorn sheep pneumonia elucidates how individual bighorn sheep respond to infection with pneumonia pathogens by examining the relationship between exposure history and survival in situ. Pneumonia is a poorly understood disease that has impeded the recovery of bighorn sheep (Ovis canadensis following their widespread extirpation in the 1900s. We analyzed the effects of pneumonia-exposure history on survival of 388 radio-collared adults and 753 ewe-lamb pairs. Results from Cox proportional hazards models suggested that surviving ewes develop protective immunity after exposure, but previous exposure in ewes does not protect their lambs during pneumonia outbreaks. Paradoxically, multiple exposures of ewes to pneumonia were associated with diminished survival of their offspring during pneumonia outbreaks. Although there was support for waning and boosting immunity in ewes, models with consistent immunizing exposure were similarly supported. Translocated animals that had not previously been exposed were more likely to die of pneumonia than residents. These results suggest that pneumonia in bighorn sheep can lead to aging populations of immune adults with limited recruitment. Recovery is unlikely to be enhanced by translocating naïve healthy animals into or near populations infected with pneumonia pathogens.

  4. Use of exposure history to identify patterns of immunity to pneumonia in bighorn sheep (Ovis canadensis).

    Science.gov (United States)

    Plowright, Raina K; Manlove, Kezia; Cassirer, E Frances; Cross, Paul C; Besser, Thomas E; Hudson, Peter J

    2013-01-01

    Individual host immune responses to infectious agents drive epidemic behavior and are therefore central to understanding and controlling infectious diseases. However, important features of individual immune responses, such as the strength and longevity of immunity, can be challenging to characterize, particularly if they cannot be replicated or controlled in captive environments. Our research on bighorn sheep pneumonia elucidates how individual bighorn sheep respond to infection with pneumonia pathogens by examining the relationship between exposure history and survival in situ. Pneumonia is a poorly understood disease that has impeded the recovery of bighorn sheep (Ovis canadensis) following their widespread extirpation in the 1900s. We analyzed the effects of pneumonia-exposure history on survival of 388 radio-collared adults and 753 ewe-lamb pairs. Results from Cox proportional hazards models suggested that surviving ewes develop protective immunity after exposure, but previous exposure in ewes does not protect their lambs during pneumonia outbreaks. Paradoxically, multiple exposures of ewes to pneumonia were associated with diminished survival of their offspring during pneumonia outbreaks. Although there was support for waning and boosting immunity in ewes, models with consistent immunizing exposure were similarly supported. Translocated animals that had not previously been exposed were more likely to die of pneumonia than residents. These results suggest that pneumonia in bighorn sheep can lead to aging populations of immune adults with limited recruitment. Recovery is unlikely to be enhanced by translocating naïve healthy animals into or near populations infected with pneumonia pathogens.

  5. How Respiratory Pathogens Contribute to Lamb Mortality in a Poorly Performing Bighorn Sheep ( Ovis canadensis ) Herd.

    Science.gov (United States)

    Wood, Mary E; Fox, Karen A; Jennings-Gaines, Jessica; Killion, Halcyon J; Amundson, Sierra; Miller, Michael W; Edwards, William H

    2017-01-01

    We evaluated bighorn sheep ( Ovis canadensis ) ewes and their lambs in captivity to examine the sources and roles of respiratory pathogens causing lamb mortality in a poorly performing herd. After seven consecutive years of observed December recruitments of sheep from the remnant Gribbles Park herd in Colorado, US were captured and transported to the Thorne-Williams Wildlife Research Center in Wyoming in March 2013. Ewes were sampled repeatedly over 16 mo. In April 2014, ewes were separated into individual pens prior to lambing. Upon death, lambs were necropsied and tested for respiratory pathogens. Six lambs developed clinical respiratory disease and one lamb was abandoned. Pathology from an additional six lambs born in 2013 was also evaluated. Mycoplasma ovipneumoniae , leukotoxigenic Mannheimia spp., leukotoxigenic Bibersteinia trehalosi , and Pasteurella multocida all contributed to lamb pneumonia. Histopathology suggested a continuum of disease, with lesions typical of pasteurellosis predominating in younger lambs and lesions typical of mycoplasmosis predominating in older lambs. Mixed pathology was observed in lambs dying between these timeframes. We suspected that all the ewes in our study were persistently infected and chronically shedding the bacteria that contributed to summer lamb mortality.

  6. Role of carriers in the transmission of pneumonia in bighorn sheep (Ovis canadensis).

    Science.gov (United States)

    Raghavan, Bindu; Erickson, Kayla; Kugadas, Abirami; Batra, Sai A; Call, Douglas R; Davis, Margaret A; Foreyt, William J; Srikumaran, Subramaniam

    2016-06-15

    In the absence of livestock contact, recurring lamb mortality in bighorn sheep (Ovis canadensis) populations previously exposed to pneumonia indicates the likely presence of carriers of pneumonia-causing pathogens, and possibly inadequate maternally derived immunity. To investigate this problem we commingled naïve, pregnant ewes (n=3) with previously exposed rams (n=2). Post-commingling, all ewes and lambs born to them acquired pneumonia-causing pathogens (leukotoxin-producing Pasteurellaceae and Mycoplasma ovipneumoniae), with subsequent lamb mortality between 4-9 weeks of age. Infected ewes became carriers for two subsequent years and lambs born to them succumbed to pneumonia. In another experiment, we attempted to suppress the carriage of leukotoxin-producing Pasteurellaceae by administering an antibiotic to carrier ewes, and evaluated lamb survival. Lambs born to both treatment and control ewes (n=4 each) acquired pneumonia and died. Antibody titers against leukotoxin-producing Pasteurellaceae in all eight ewes were 'protective' (>1:800 and no apparent respiratory disease); however their lambs were either born with comparatively low titers, or with high (but non-protective) titers that declined rapidly within 2-8 weeks of age, rendering them susceptible to fatal disease. Thus, exposure to pneumonia-causing pathogens from carrier ewes, and inadequate titers of maternally derived protective antibodies, are likely to render bighorn lambs susceptible to fatal pneumonia. © 2016. Published by The Company of Biologists Ltd.

  7. Echinococcus canadensis (G7) and Echinococcus granulosus sensu stricto (G1) in swine of southern Brazil.

    Science.gov (United States)

    Monteiro, D U; Botton, S A; Tonin, A A; Azevedo, M I; Graichen, D A S; Noal, C B; de la Rue, M L

    2014-05-28

    The cystic echinococcosis (CE) is an important zoonotic disease caused by the parasite Echinococcus spp. In Brazil, this parasite is present in Rio Grande do Sul (RS) state, border with Argentina and Uruguay, causing several damages to human and animal health. This study aimed to identify Echinococcus spp. in hydatid cysts of swine and evaluate the similarity of the genotypes through the phylogenetic analysis. A total of 3,101,992 swine were slaughtered in the central/northern region of RS/Brazil, during 2008-2012. Five isolates were characterized as hydatid cyst by molecular analysis, based on the mitochondrial gene cytochrome c oxidase subunit I (cox-I). The genotypes E. granulosus sensu stricto (G1) (n=2) and E. canadensis (G7) (n=3) were identified in the hydatid cysts. The swine represents a potential intermediate host for different genotypes of Echinococcus spp., besides it can contribute to the perpetuation of the parasite's life cycle in rural areas. Copyright © 2014 Elsevier B.V. All rights reserved.

  8. Manipulating beaver (Castor canadensis) feeding responses to invasive tamarisk (Tamarix spp.).

    Science.gov (United States)

    Kimball, Bruce A; Perry, Kelly R

    2008-08-01

    To evaluate methods for promoting consumption of tamarisk plants by beavers (Castor canadensis), we determined the feeding responses by captive beavers to diets that contained tannins and sodium chloride (hereafter referred to as tamarisk diet). In two-choice tests, beavers consumed equivalent quantities of tamarisk diet and control diet. Treatment with polyethylene glycol and fructose did not increase beaver preferences for the tamarisk diet. When offered the choice of control diet and casein hydrolysate-treated control diet, beavers strongly avoided the latter, showing feeding deterring activity of casein hydrolysate. However, when tamarisk diet was the alternative to the deterrent treatment, beavers consumed similar quantities of the two diets. Finally, beaver foraging preferences for actual plant cuttings were assessed. Casein hydrolysate application to cuttings of black poplar (Populus nigra) and Scouler's willow (Salix scouleriana) reduced browsing of these highly preferred species and promoted a marked increase in browsing of tamarisk (Tamarix ramosissima). These results suggest that casein hydrolysate treatment of desirable riparian plant species such as Salix and Populus may promote beaver foraging of invasive tamarisk.

  9. Bilateral uric acid nephrolithiasis and ureteral hypertrophy in a free-ranging river otter (Lontra canadensis)

    Science.gov (United States)

    Grove, Robert A.; Bildfell, Rob; Henny, Charles J.; Buhler, D.R.

    2003-01-01

    We report the first case of uric acid nephrolithiasis in a free-ranging river otter (Lontra canadensis). A 7 yr old male river otter collected from the Skagit River of western Washington (USA) had bilateral nephrolithiasis and severely enlarged ureters (one of 305 examined [0.33%]). The uroliths were 97% uric acid and 3% protein. Microscopic changes in the kidney were confined to expansion of renal calyces, minor loss of medullary tissue, and multifocal atrophy of the cortical tubules. No inflammation was observed in either kidney or the ureters. The ureters were enlarged due to marked hypertrophy of smooth muscle plus dilation of the lumen. Fusion of the major calyces into a single ureteral lumen was several cm distal to that of two adult male otters used as histopathologic control specimens. This case report is part of a large contaminant study of river otters collected from Oregon and Washington. It is important to understand diseases and lesions of the otter as part of our overall evaluation of this population.

  10. Role of carriers in the transmission of pneumonia in bighorn sheep (Ovis canadensis

    Directory of Open Access Journals (Sweden)

    Bindu Raghavan

    2016-06-01

    Full Text Available In the absence of livestock contact, recurring lamb mortality in bighorn sheep (Ovis canadensis populations previously exposed to pneumonia indicates the likely presence of carriers of pneumonia-causing pathogens, and possibly inadequate maternally derived immunity. To investigate this problem we commingled naïve, pregnant ewes (n=3 with previously exposed rams (n=2. Post-commingling, all ewes and lambs born to them acquired pneumonia-causing pathogens (leukotoxin-producing Pasteurellaceae and Mycoplasma ovipneumoniae, with subsequent lamb mortality between 4-9 weeks of age. Infected ewes became carriers for two subsequent years and lambs born to them succumbed to pneumonia. In another experiment, we attempted to suppress the carriage of leukotoxin-producing Pasteurellaceae by administering an antibiotic to carrier ewes, and evaluated lamb survival. Lambs born to both treatment and control ewes (n=4 each acquired pneumonia and died. Antibody titers against leukotoxin-producing Pasteurellaceae in all eight ewes were ‘protective’ (>1:800 and no apparent respiratory disease; however their lambs were either born with comparatively low titers, or with high (but non-protective titers that declined rapidly within 2-8 weeks of age, rendering them susceptible to fatal disease. Thus, exposure to pneumonia-causing pathogens from carrier ewes, and inadequate titers of maternally derived protective antibodies, are likely to render bighorn lambs susceptible to fatal pneumonia.

  11. Mass Spectrometry and Antibody-Based Characterization of Blood Vessels from Brachylophosaurus canadensis.

    Science.gov (United States)

    Cleland, Timothy P; Schroeter, Elena R; Zamdborg, Leonid; Zheng, Wenxia; Lee, Ji Eun; Tran, John C; Bern, Marshall; Duncan, Michael B; Lebleu, Valerie S; Ahlf, Dorothy R; Thomas, Paul M; Kalluri, Raghu; Kelleher, Neil L; Schweitzer, Mary H

    2015-12-04

    Structures similar to blood vessels in location, morphology, flexibility, and transparency have been recovered after demineralization of multiple dinosaur cortical bone fragments from multiple specimens, some of which are as old as 80 Ma. These structures were hypothesized to be either endogenous to the bone (i.e., of vascular origin) or the result of biofilm colonizing the empty osteonal network after degradation of original organic components. Here, we test the hypothesis that these structures are endogenous and thus retain proteins in common with extant archosaur blood vessels that can be detected with high-resolution mass spectrometry and confirmed by immunofluorescence. Two lines of evidence support this hypothesis. First, peptide sequencing of Brachylophosaurus canadensis blood vessel extracts is consistent with peptides comprising extant archosaurian blood vessels and is not consistent with a bacterial, cellular slime mold, or fungal origin. Second, proteins identified by mass spectrometry can be localized to the tissues using antibodies specific to these proteins, validating their identity. Data are available via ProteomeXchange with identifier PXD001738.

  12. A novel papillomavirus isolated from proliferative skin lesions of a wild American beaver (Castor canadensis).

    Science.gov (United States)

    Rogovskyy, Artem S; Baszler, Timothy V; Bradway, Daniel S; Bruning, Darren L; Davitt, Christine M; Evermann, James F; Burk, Robert D; Chen, Zigui; Mansfield, Kristin G; Haldorson, Gary J

    2012-07-01

    Cutaneous papillomatosis was diagnosed in an adult American beaver (Castor canadensis). Gross lesions included numerous exophytic, roughly circular, lightly pigmented lesions on hairless areas of fore and hind feet and the nose. The most significant histopathologic findings were multifocal papilliform hyperplasia of the superficial stratified squamous epithelium, with multifocal koilocytes, and multiple cells with large, darkly basophilic intranuclear inclusion bodies. A virus with properties consistent with papillomavirus (PV) was recovered by virus isolation of skin lesions, utilizing rabbit and feline kidney cell lines. The presence of the virus was confirmed by PV-specific polymerase chain reaction. The partial sequences of E1 and L1 genes did not closely match those of any PVs in GenBank, suggesting that this might be a new type of PV. Partial E1 and L1 nucleotide sequences of the beaver papillomavirus (hereafter, ARbeaver-PV1) were used to create a phylogenetic tree employing the complete E1 and L1 open reading frame nucleotide sequences of 68 PVs. The phylogenetic tree placed the ARbeaver-PV1 in a clade that included the Mupapillomavirus (HPV1 and HPV63) and Kappapapillomavirus (OcPV1 and SfPV1) genera. The present article confirms the papillomaviral etiology of cutaneous exophytic lesions in the beaver.

  13. Phylogeographic and population genetic structure of bighorn sheep ( Ovis canadensis ) in North American deserts.

    Science.gov (United States)

    Buchalski, Michael R; Sacks, Benjamin N; Gille, Daphne A; Penedo, Maria Cecilia T; Ernest, Holly B; Morrison, Scott A; Boyce, Walter M

    2016-06-09

    Fossil data are ambiguous regarding the evolutionary origin of contemporary desert bighorn sheep ( Ovis canadensis subspecies). To address this uncertainty, we conducted phylogeographic and population genetic analyses on bighorn sheep subspecies found in southwestern North America. We analyzed 515 base pairs of mtDNA control region sequence and 39 microsatellites in 804 individuals from 58 locations. Phylogenetic analyses revealed 2 highly divergent clades concordant with Sierra Nevada ( O. c. sierrae ) and Rocky Mountain ( O. c. canadensis ) bighorn and showed that these 2 subspecies both diverged from desert bighorn prior to or during the Illinoian glaciation (~315-94 thousand years ago [kya]). Desert bighorn comprised several more recently diverged haplogroups concordant with the putative Nelson ( O. c. nelsoni ), Mexican ( O. c. mexicana ), and Peninsular ( O. c. cremnobates ) subspecies. Corresponding estimates of effective splitting times (~17-3 kya), and haplogroup ages (~85-72 kya) placed the most likely timeframe for divergence among desert bighorn subspecies somewhere within the last glacial maximum. Median-joining haplotype network and Bayesian skyline analyses both indicated that desert bighorn collectively comprised a historically large and haplotype-diverse population, which subsequently lost much of its diversity through demographic decline. Using microsatellite data, discriminant analysis of principle components (DAPC) and Bayesian clustering analyses both indicated genetic structure concordant with the geographic distribution of 3 desert subspecies. Likewise, microsatellite and mitochondrial-based F ST comparisons revealed significant fixation indices among the desert bighorn genetic clusters. We conclude these desert subspecies represent ancient lineages likely descended from separate Pleistocene refugial populations and should therefore be managed as distinct taxa to preserve maximal biodiversity. Los datos de fósiles sobre el origen evolutivo

  14. Population genetics and adaptation to climate along elevation gradients in invasive Solidago canadensis.

    Directory of Open Access Journals (Sweden)

    Emily V Moran

    Full Text Available Gene flow between populations may either support local adaptation by supplying genetic variation on which selection may act, or counteract it if maladapted alleles arrive faster than can be purged by selection. Although both such effects have been documented within plant species' native ranges, how the balance of these forces influences local adaptation in invasive plant populations is less clear, in part because introduced species often have lower genetic variation initially but also tend to have good dispersal abilities. To evaluate the extent of gene flow and adaptation to local climate in invasive populations of Solidago canadensis, and the implications of this for range expansion, we compared population differentiation at microsatellite and chloroplast loci for populations across Switzerland and assessed the effect of environmental transfer distance using common gardens. We found that while patterns of differentiation at neutral genetic markers suggested that populations are connected through extensive pollen and seed movement, common-garden plants nonetheless exhibited modest adaptation to local climate conditions. Growth rate and flower production declined with climatic distance from a plant's home site, with clones from colder home sites performing better at or above the range limit. Such adaptation in invasive species is likely to promote further spread, particularly under climate change, as the genotypes positioned near the range edge may be best able to take advantage of lengthening growing seasons to expand the range.

  15. Cadmium triggers Elodea canadensis to change the surrounding water pH and thereby Cd uptake.

    Science.gov (United States)

    Javed, M Tariq; Greger, Maria

    2011-01-01

    This study was aimed to investigate the influence of Elodea canadensis shoots on surrounding water pH in the presence of cadmium and the effect of plant-induced pH on cadmium uptake. The pH change in the surrounding nutrient solution and Cd uptake by Elodea shoots were investigated after cultivation of various plant densities (1, 3, 6 plants per 500 ml) in hydroponics at a starting pH of 4.0 and in the presence of different concentrations of cadmium (0, 0.1, 0.5 microM). Cadmium uptake was also investigated at different constant pH (4.0, 4.5, 5.5 and 6.5). To investigate if the pH change arose from photosynthetic activities, plants were grown under light, darkness or in the presence of a photosynthetic inhibitor, 3-(3,4-dichlorophenyl)-1,1-dimethylurea (DCMU), and 0.5 microM cadmium in the solution. Elodea had an ability to increase the surrounding water pH, when the initial pH was low, which resulted in increased accumulation of Cd. The higher the plant density, the more pronounced was the pH change. The pH increase was not due to the photosynthetic activity since the pH rise was more pronounced under darkness and in the presence of DCMU. The pH increase by Elodea was triggered by cadmium.

  16. Hematologic parameters and hemoparasites of nonmigratory Canada geese (Branta canadensis) from Greensboro, North Carolina, USA.

    Science.gov (United States)

    Charles-Smith, Lauren E; Rutledge, M Elizabeth; Meek, Caroline J; Baine, Katherine; Massey, Elizabeth; Ellsaesser, Laura N; DePerno, Christopher S; Moorman, Christopher E; Degernes, Laurel A

    2014-03-01

    Large flocks of wild, nonmigratory Canada geese (Branta canadensis) have established permanent residence throughout the eastern United States and have become a public concern. Few studies have assessed the hematologic parameters for these populations, which could provide useful information for monitoring individual and population health of Canada geese. This study measured the hematologic parameters and detected the presence of hemoparasites from 146 wild, nonmigratory Canada geese in central North Carolina, USA, during their annual molt. The age class, sex, and weight of each bird were recorded at capture. Values for packed cell volume (PCV), estimated white blood cell count, white blood cell differentials, and heterophil: lymphocyte ratios were calculated for each bird. Adults and female geese had higher estimated white blood cell counts compared with juveniles and males, respectively. The PCV increased with weight and age class. Adult geese had higher percentages of heterophils and heterophil: lymphocyte ratios, whereas juvenile geese had higher percentages of lymphocytes. Relative eosinophil counts in adults increased with decreasing bird weight, and relative monocyte counts in juveniles increased with increasing weight. Three percent of geese were infected with species of Hemoproteus blood parasites. Atypical lymphocyte morphology, including pseudopods, split nuclei, and cytoplasmic granules, was observed in 5% of the birds. The hematologic values reported for adult and juvenile nonmigratory Canada geese in this study may serve as reference intervals for ecological studies and veterinary care of wild and captive Canada geese.

  17. Ecological life histories of the three aquatic nuisance plants, Myriophyllum spicatum, Potamogeton crispus and Elodea canadensis

    Science.gov (United States)

    Nichols, S.A.; Shaw, B.H.

    1986-01-01

    The life histories of Myriophyllum spicatum L., Elodea canadensis Michx., and Potamogeton crispus L., serious aquatic nuisances in many regions of the world, are reviewed to provide insights into the life style of successful aquatic nuisance plants. Specifically, their distribution and spread in North America; their life cycle, productive and reproductive potential; and their ecosystem relationships are reviewed. Hopefully this review will improve a manager's ability to deal with aquatic nuisance problems. It also provides suggestions for basic research needed to develop more effective management practices. It was found that all three species possess a number of adaptations, including an ability to rapidly propagate vegetatively, an opportunistic nature for obtaining nutrients, a life cycle that favors cool weather, and a number of mechanisms which enhance photosynthetic efficiency, which allow them to proliferate. These three species do provide benefits to the ecosystem through their roles in materials cycling and energy flow. Therefore, management of these species should take an integrated approach which recognizes these benefits. The life history information available about the three species varies tremendously; however, a better understanding of resource gain and allocation is needed to manage all three species. Specifically, more research is needed to provide a better understanding of: 1) the role bicarbonate plays in photosynthesis, 2) the role roots play in supplying CO2 to the plabts, 3) resource accumulation and allocation under different temperature and light regimes, 4) resource allocation on a seasonal basis, and 5) nutrient cycling under different management regimes. ?? 1986 Dr W. Junk Publishers.

  18. Cytauxzoon Infections in Wild Felids from Carpathian-Danubian-Pontic Space: Further Evidence for a Different Cytauxzoon Species in European Felids

    Czech Academy of Sciences Publication Activity Database

    Gallusová, M.; Jirsová, D.; Mihalca, A. D.; Gherman, C.M.; D’Amico, G.; Qablan, M. A.; Modrý, David

    2016-01-01

    Roč. 102, č. 3 (2016), s. 377-380 ISSN 0022-3395 Institutional support: RVO:60077344 Keywords : Lynx * domestic cats * molecular characterization Subject RIV: GJ - Animal Vermins ; Diseases, Veterinary Medicine Impact factor: 1.326, year: 2016

  19. Sensitivity of a methematical model used to optimize revenue in a predation-competative farming environment

    Directory of Open Access Journals (Sweden)

    J. Swart

    2003-12-01

    Full Text Available Sheep farmers in the Cape Midlands region of South Africa frequently sustain stock losses through predation by caracal lynx. Further losses are incurred when hyrax compete with sheep for available pasture. Hyrax constitute the natural prey for lynx with the result that culling either hyrax or lynx has complicated feedback effects. In order to investigate the spill-over problems from the natural predator-prey system on farming revenue, a differential equations model was previously formulated, comprising the sectors Hyrax, Lynx, Sheep, Pasture and Revenue and an optimisation procedure was used to determine the optimal culling rate policy for farmers. The purpose of this paper is to investigate the numerical, behavioural and policy sensitivity of this model to parameter uncertainty.

  20. Florida DOT Orlando ITS World Congress Vehicle Awareness Device

    Data.gov (United States)

    Department of Transportation — Florida DOT (FDOT) installed Vehicle Awareness Devices (VADs) on a set of Lynx transit buses as part of a demonstration for the ITS World Congress held in Orlando in...

  1. Development of nine new microsatellite loci for the American beaver, Castor canadensis (Rodentia: Castoridae), and cross-species amplification in the European beaver, Castor fiber.

    Science.gov (United States)

    Pelz-Serrano, Karla; Munguia-Vega, Adrian; Piaggio, Antoinette J; Neubaum, Melissa; Munclinger, Pavel; Pártl, Adam; VAN Riper Iii, Charles; Culver, Melanie

    2009-03-01

    We developed nine new nuclear dinucleotide microsatellite loci for Castor canadensis. All loci were polymorphic, except for one. The number of alleles ranged from two to four and from five to 12 in populations from Arizona and Wisconsin, respectively. Average heterozygosity ranged from 0.13 to 0.86 per locus. Since cross-species amplification in Castor fiber was successful only in four loci, we tested also nine recently published C. canadensis loci in the Eurasian species. Eight of the published loci amplified; however, three were monomorphic. The number of alleles was lower in C. fiber than in C. canadensis at all loci tested. © 2009 The Authors. Journal compilation © 2009 Blackwell Publishing Ltd.

  2. Regional habitat needs of a nationally listed species, Canada Warbler (Cardellina canadensis, in Alberta, Canada

    Directory of Open Access Journals (Sweden)

    Jeffrey R. Ball

    2016-12-01

    Full Text Available Understanding factors that affect the distribution and abundance of species is critical to developing effective management plans for conservation. Our goal was to quantify the distribution and abundance of Canada Warbler (Cardellina canadensis, a threatened old-forest associate in Alberta, Canada. The Canada Warbler has declined across its range, including in Alberta where habitat loss and alteration from urban expansion, forestry, and energy development are changing the forest landscape. We used 110,427 point count survey visits from 32,287 unique survey stations to model local-level (150-m radius circular buffers and stand-level (564-m radius circular buffers habitat associations of the Canada Warbler. We found that habitat supporting higher densities of Canada Warblers was locally concentrated yet broadly distributed across Alberta's boreal forest region. Canada Warblers were most commonly associated with older deciduous forest at the local scale, particularly near small, incised streams, and greater amounts of deciduous forest at the stand scale. Predicted density was lower in other forest types and younger age classes measured at the local scale. There was little evidence that local-scale fragmentation (i.e., edges created by linear features influenced Canada Warbler abundance. However, current forestry practices in the province likely will reduce the availability of Canada Warbler habitat over time by cutting old deciduous forest stands. Our results suggest that conservation efforts aimed at Canada Warbler focus on retaining large stands of old deciduous forest, specifically stands adjacent to streams, by increasing the width of deciduous retention buffers along streams during harvest and increasing the size and number of old forest residual patches in harvested stands.

  3. Propagation of goldenrod (Solidago canadensis L. from leaf and nodal explants

    Directory of Open Access Journals (Sweden)

    Jun Li

    2012-02-01

    Full Text Available Goldenrod (Solidago canadensis L. is an invasive plant species in many countries except North America but a cut-flower species worldwide. There is a need to generate and propagate goldenrod clones efficiently for research and commercial purposes. A callus induction and plantlet regeneration system was developed by studying the influence of explant type and different concentrations of plant growth regulators. The highest callus production from leaf segments was obtained on Murashige and Skoog’s medium (MS medium supplemented with 1.0 mg/L naphthalene acetic acid (NAA and 1.0 mg/L 6-benzylaminopurine (BA. Adventitious shoots could be regenerated directly from leaf explants without an intermediate callus phase with the highest shoot induction percentage of 87.2%. The largest number of adventitious shoots per leaf explant (3.2 was obtained on MS medium supplemented with 0.4 mg/L NAA and 2.0 mg/L BA. MS medium supplemented with 0.1 mg/L NAA and 1.0 mg/L BA was the best medium for axillary shoot regeneration from nodal segments. The highest root number and longest roots occurred on half-strength MS without the addition of any growth regulator. Rooted plantlets were then transferred to a soil-based growth medium, placed in a greenhouse, and acclimatized with 100% success. All surviving plants grew normally without showing any morphological varia­tion when compared to those grow from seed. This regeneration protocol may be used to produce certain biotypes of goldenrod suitable for genetic transformation rapid propagation of goldenrod for commercial purposes or for screening fungi and toxins as potential biocontrol agents against this weed.

  4. Demographic consequences of greater clonal than sexual reproduction in Dicentra canadensis.

    Science.gov (United States)

    Lin, Chia-Hua; Miriti, Maria N; Goodell, Karen

    2016-06-01

    Clonality is a widespread life history trait in flowering plants that may be essential for population persistence, especially in environments where sexual reproduction is unpredictable. Frequent clonal reproduction, however, could hinder sexual reproduction by spatially aggregating ramets that compete with seedlings and reduce inter-genet pollination. Nevertheless, the role of clonality in relation to variable sexual reproduction in population dynamics is often overlooked. We combined population matrix models and pollination experiments to compare the demographic contributions of clonal and sexual reproduction in three Dicentra canadensis populations, one in a well-forested landscape and two in isolated forest remnants. We constructed stage-based transition matrices from 3 years of census data to evaluate annual population growth rates, λ. We used loop analysis to evaluate the relative contribution of different reproductive pathways to λ. Despite strong temporal and spatial variation in seed set, populations generally showed stable growth rates. Although we detected some pollen limitation of seed set, manipulative pollination treatments did not affect population growth rates. Clonal reproduction contributed significantly more than sexual reproduction to population growth in the forest remnants. Only at the well-forested site did sexual reproduction contribute as much as clonal reproduction to population growth. Flowering plants were more likely to transition to a smaller size class with reduced reproductive potential in the following year than similarly sized nonflowering plants, suggesting energy trade-offs between sexual and clonal reproduction at the individual level. Seed production had negligible effects on growth and tuber production of individual plants. Our results demonstrate that clonal reproduction is vital for population persistence in a system where sexual reproduction is unpredictable. The bias toward clonality may be driven by low fitness returns

  5. Subtype-Specific Influenza A Virus Antibodies in Canada Geese (Branta canadensis)

    Science.gov (United States)

    Kistler, Whitney M.; Stallknecht, David E.; DeLiberto, Thomas J.; Van Why, Kyle; Yabsley, Michael J.

    2015-01-01

    Historically, surveillance for influenza A viruses (IAVs) in wild birds has relied on viral detection assays. This was largely due to poor performance of serological assays in wild birds; however, recently developed commercial serological assays have improved the ability to detect IAV antibodies in wild birds. Serological surveillance for IAV antibodies in Canada geese (Branta canadensis) has shown that, despite a low prevalence of virus isolations, Canada geese are frequently exposed to IAVs and that exposure increases with latitude, which follows virus isolation prevalence patterns observed in dabbling ducks. The objectives of this study were to further evaluate IAV antibodies in Canada geese using a subtype-specific serological assay to determine if Canada geese are exposed to subtypes that commonly circulate in dabbling ducks. We collected serum samples from Canada geese in Minnesota, New Jersey, Pennsylvania, and Wisconsin and tested for antibodies to IAVs using a blocking ELISA. Positive samples were further tested by hemagglutination inhibition for 10 hemagglutinin IAV subtypes (H1–H10). Overall, we detected antibodies to NP in 24% (714/2,919) of geese. Antibodies to H3, H4, H5, and H6 subtypes predominated, with H5 being detected most frequently. A decrease in H5 HI antibody prevalence and titers was observed from 2009 to 2012. We also detected similar exposure pattern in Canada geese from New Jersey, Minnesota, Washington and Wisconsin. Based on the published literature, H3, H4, and H6 viruses are the most commonly reported IAVs from dabbling ducks. These results indicate that Canada geese also are frequently exposed to viruses of the same HA subtypes; however, the high prevalence of antibodies to H5 viruses was not expected as H5 IAVs are generally not well represented in reported isolates from ducks. PMID:25845755

  6. Molecular techniques to distinguish morphologically similar Hydrilla verticillata, Egeria densa, Elodea nuttallii, and Elodea canadensis

    Science.gov (United States)

    Rybicki, Nancy B.; Kirshtein, Julie D.; Voytek, Mary A.

    2013-01-01

    The four submerged aquatic species, hydrilla (Hydrilla verticillata [monoecious and dioecious]), Brazilian waterweed (Egeria densa), Canadian waterweed (Elodea canadensis), and western waterweed (Elodea nuttallii), are difficult to positively identify because of their morphological similarity to each other, resulting in possible misidentification. This limits our ability to understand their past and present distribution, which is important in aquatic plant management. We investigated a molecular technique to identify these species, which are problematic because of their invasive nature on multiple continents. Approximately 100 samples of these species, ranging in age from 40-yr-old herbarium samples to recently collected plants, were collected from regions across the United States. The distribution and range of the samples collected in this research were compared to those reported in the literature. We confirmed information on the current wide distribution of both hydrilla biotypes in the United States and discovered that hydrilla had actually invaded the waterways near Washington, DC 6 yr earlier than originally reported. In addition, we found evidence of the confusion, dating back to the 1980s, between Canadian waterweed and western waterweed in the mid-Atlantic region of the United States. Canadian waterweed was previously reported as common and western waterweed as rare; however, our samples indicate the opposite is true. This information indicates there is a need for investigators to anticipate the spread of hydrilla populations to northern U.S. waterways, where it will compete with existing plant species, including Canadian and western waterweeds. Our ability to confirm distribution and pace of spread of invasive and noninvasive species will improve with increased application of molecular techniques.

  7. [Radioecological monitoring of the Yenisei River and citological characterization of a submerged aquatic plant Elodea canadensis].

    Science.gov (United States)

    Bolsunovskiĭ, A Ia; Muratova, E N; Sukovatyĭ, A G; Pimenov, A V; Sanzharaeva, E A; Zotina, T A; Sedel'nikova, T S; Pan'kov, E V; Kornilova, M G

    2007-01-01

    The study was devoted to investigation of the contents of radionuclides and of heavy metals and to evaluate the frequency of chromosomal aberrations in samples of Elodea canadensis, a submerged plant, collected in different parts of the Yenisei River. The samples were collected in the area subjected to radioactive impact of the Mining-and-Chemical Combine (MCC) at Zheleznogorsk and in the control area, upstream of the MCC. The investigations shown that elodea biomass in the area affected by MCC operation contained a long inventory of artificial radionuclides typical for the MCC discharges. The upstream of the MCC, in the control sampling area, the sediments and the elodea biomass contained only one artificial radionuclide--137Cs. Thus, the exposure doses to elodea shoots and roots upstream of the MCC are small (not more than 8 microGy/d) and the main contribution info the dose is made by natural radionuclides. At the MCC discharge site (the village of Atamanovo) and at the downstream of it, the total dose rate increases almost an order of magnitude, reaching its maximal values--72 microGy/d for elodea shoots and 58 microGy/d for its roots. Cytogenetic investigations of elodea roots shown that at the MCC discharge site (the village of Atamanovo) and at downstream of it the occurrence of chromosomal aberrations in ana-telophase and in metaphase cells of elodea was considerably higher than in the control area. It is highly probable that this simultaneous dramatic increase in the total exposure rate and the occurrence of chromosomal aberrations in elodea is associated with the radiation factor. It is suggested that elodea is affected not only by the radiation factor but also by the chemical factor--toxicity of heavy metals.

  8. Lactobacillus brantae sp. nov., isolated from faeces of Canada geese (Branta canadensis).

    Science.gov (United States)

    Volokhov, Dmitriy V; Amselle, Megan; Beck, Brian J; Popham, David L; Whittaker, Paul; Wang, Hua; Kerrigan, Elizabeth; Chizhikov, Vladimir E

    2012-09-01

    Three strains of lactic acid bacteria (LAB) were isolated from the faeces of apparently healthy wild Canada geese (Branta canadensis) in 2010 by cultivating faecal LAB on Rogosa SL agar under aerobic conditions. These three isolates were found to share 99.9 % gene sequence similarity of their 16S rRNA, their 16S-23S intergenic transcribed spacer region (ITS), partial 23S rRNA, rpoB, rpoC, rpoA and pheS gene sequences. However, the three strains exhibited lower levels of sequence similarity of these genetic targets to all known LAB, and the phylogenetically closest species to the geese strains were Lactobacillus casei, Lactobacillus paracasei, Lactobacillus rhamnosus and Lactobacillus saniviri. In comparison to L. casei ATCC 393(T), L. paracasei ATCC 25302(T), L. rhamnosus ATCC 7469(T) and L. saniviri DSM 24301(T), the novel isolates reacted uniquely in tests for cellobiose, galactose, mannitol, citric acid, aesculin and dextrin, and gave negative results in tests for l-proline arylamidase and l-pyrrolydonyl-arylamidase, and in the Voges-Proskauer test. Biochemical tests for cellobiose, aesculin, galactose, gentiobiose, mannitol, melezitose, ribose, salicin, sucrose, trehalose, raffinose, turanose, amygdalin and arbutin could be used for differentiation between L. saniviri and the novel strains. On the basis of phenotypic and genotypic characteristics, and phylogenetic data, the three isolates represent a novel species of the genus Lactobacillus, for which the name Lactobacillus brantae sp. nov. is proposed. The type strain is SL1108(T) (= ATCC BAA-2142(T) = LMG 26001(T) = DSM 23927(T)) and two additional strains are SL1170 and SL60106.

  9. Local extinction and unintentional rewilding of bighorn sheep (Ovis canadensis on a desert island.

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    Benjamin T Wilder

    Full Text Available Bighorn sheep (Ovis canadensis were not known to live on Tiburón Island, the largest island in the Gulf of California and Mexico, prior to the surprisingly successful introduction of 20 individuals as a conservation measure in 1975. Today, a stable island population of ∼500 sheep supports limited big game hunting and restocking of depleted areas on the Mexican mainland. We discovered fossil dung morphologically similar to that of bighorn sheep in a dung mat deposit from Mojet Cave, in the mountains of Tiburón Island. To determine the origin of this cave deposit we compared pellet shape to fecal pellets of other large mammals, and extracted DNA to sequence mitochondrial DNA fragments at the 12S ribosomal RNA and control regions. The fossil dung was 14C-dated to 1476-1632 calendar years before present and was confirmed as bighorn sheep by morphological and ancient DNA (aDNA analysis. 12S sequences closely or exactly matched known bighorn sheep sequences; control region sequences exactly matched a haplotype described in desert bighorn sheep populations in southwest Arizona and southern California and showed subtle differentiation from the extant Tiburón population. Native desert bighorn sheep previously colonized this land-bridge island, most likely during the Pleistocene, when lower sea levels connected Tiburón to the mainland. They were extirpated sometime in the last ∼1500 years, probably due to inherent dynamics of isolated populations, prolonged drought, and (or human overkill. The reintroduced population is vulnerable to similar extinction risks. The discovery presented here refutes conventional wisdom that bighorn sheep are not native to Tiburón Island, and establishes its recent introduction as an example of unintentional rewilding, defined here as the introduction of a species without knowledge that it was once native and has since gone locally extinct.

  10. Local extinction and unintentional rewilding of bighorn sheep (Ovis canadensis) on a desert island

    Science.gov (United States)

    Wilder, Benjamin T.; Betancourt, Julio L.; Epps, Clinton W.; Crowhurst, Rachel S.; Mead, Jim I.; Ezcurra, Exequiel

    2014-01-01

    Bighorn sheep (Ovis canadensis) were not known to live on Tiburón Island, the largest island in the Gulf of California and Mexico, prior to the surprisingly successful introduction of 20 individuals as a conservation measure in 1975. Today, a stable island population of ~500 sheep supports limited big game hunting and restocking of depleted areas on the Mexican mainland. We discovered fossil dung morphologically similar to that of bighorn sheep in a dung mat deposit from Mojet Cave, in the mountains of Tiburón Island. To determine the origin of this cave deposit we compared pellet shape to fecal pellets of other large mammals, and extracted DNA to sequence mitochondrial DNA fragments at the 12S ribosomal RNA and control regions. The fossil dung was 14C-dated to 1476–1632 calendar years before present and was confirmed as bighorn sheep by morphological and ancient DNA (aDNA) analysis. 12S sequences closely or exactly matched known bighorn sheep sequences; control region sequences exactly matched a haplotype described in desert bighorn sheep populations in southwest Arizona and southern California and showed subtle differentiation from the extant Tiburón population. Native desert bighorn sheep previously colonized this land-bridge island, most likely during the Pleistocene, when lower sea levels connected Tiburón to the mainland. They were extirpated sometime in the last ~1500 years, probably due to inherent dynamics of isolated populations, prolonged drought, and (or) human overkill. The reintroduced population is vulnerable to similar extinction risks. The discovery presented here refutes conventional wisdom that bighorn sheep are not native to Tiburón Island, and establishes its recent introduction as an example of unintentional rewilding, defined here as the introduction of a species without knowledge that it was once native and has since gone locally extinct.

  11. Local Extinction and Unintentional Rewilding of Bighorn Sheep (Ovis canadensis) on a Desert Island

    Science.gov (United States)

    Wilder, Benjamin T.; Betancourt, Julio L.; Epps, Clinton W.; Crowhurst, Rachel S.; Mead, Jim I.; Ezcurra, Exequiel

    2014-01-01

    Bighorn sheep (Ovis canadensis) were not known to live on Tiburón Island, the largest island in the Gulf of California and Mexico, prior to the surprisingly successful introduction of 20 individuals as a conservation measure in 1975. Today, a stable island population of ∼500 sheep supports limited big game hunting and restocking of depleted areas on the Mexican mainland. We discovered fossil dung morphologically similar to that of bighorn sheep in a dung mat deposit from Mojet Cave, in the mountains of Tiburón Island. To determine the origin of this cave deposit we compared pellet shape to fecal pellets of other large mammals, and extracted DNA to sequence mitochondrial DNA fragments at the 12S ribosomal RNA and control regions. The fossil dung was 14C-dated to 1476–1632 calendar years before present and was confirmed as bighorn sheep by morphological and ancient DNA (aDNA) analysis. 12S sequences closely or exactly matched known bighorn sheep sequences; control region sequences exactly matched a haplotype described in desert bighorn sheep populations in southwest Arizona and southern California and showed subtle differentiation from the extant Tiburón population. Native desert bighorn sheep previously colonized this land-bridge island, most likely during the Pleistocene, when lower sea levels connected Tiburón to the mainland. They were extirpated sometime in the last ∼1500 years, probably due to inherent dynamics of isolated populations, prolonged drought, and (or) human overkill. The reintroduced population is vulnerable to similar extinction risks. The discovery presented here refutes conventional wisdom that bighorn sheep are not native to Tiburón Island, and establishes its recent introduction as an example of unintentional rewilding, defined here as the introduction of a species without knowledge that it was once native and has since gone locally extinct. PMID:24646515

  12. Bacterial and Archaeal Diversity in the Gastrointestinal Tract of the North American Beaver (Castor canadensis.

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    Robert J Gruninger

    Full Text Available The North American Beaver (Castor canadensis is the second largest living rodent and an iconic symbol of Canada. The beaver is a semi-aquatic browser whose diet consists of lignocellulose from a variety of plants. The beaver is a hindgut fermenter and has an enlarged ceacum that houses a complex microbiome. There have been few studies examining the microbial diversity in gastrointestinal tract of hindgut fermenting herbivores. To examine the bacterial and archaeal communities inhabiting the gastrointestinal tract of the beaver, the microbiome of the ceacum and feaces was examined using culture-independent methods. DNA from the microbial community of the ceacum and feaces of 4 adult beavers was extracted, and the16S rRNA gene was sequenced using either bacterial or archaeal specific primers. A total of 1447 and 1435 unique bacterial OTUs were sequenced from the ceacum and feaces, respectively. On average, the majority of OTUs within the ceacum were classified as Bacteroidetes (49.2% and Firmicutes (47.6%. The feaces was also dominated by OTUs from Bacteroidetes (36.8% and Firmicutes (58.9%. The composition of bacterial community was not significantly different among animals. The composition of the ceacal and feacal microbiome differed, but this difference is due to changes in the abundance of closely related OTUs, not because of major differences in the taxonomic composition of the communities. Within these communities, known degraders of lignocellulose were identified. In contrast, to the bacterial microbiome, the archaeal community was dominated by a single species of methanogen, Methanosphaera stadtmanae. The data presented here provide the first insight into the microbial community within the hindgut of the beaver.

  13. De Novo Genome and Transcriptome Assembly of the Canadian Beaver (Castor canadensis

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    Si Lok

    2017-02-01

    Full Text Available The Canadian beaver (Castor canadensis is the largest indigenous rodent in North America. We report a draft annotated assembly of the beaver genome, the first for a large rodent and the first mammalian genome assembled directly from uncorrected and moderate coverage (< 30 × long reads generated by single-molecule sequencing. The genome size is 2.7 Gb estimated by k-mer analysis. We assembled the beaver genome using the new Canu assembler optimized for noisy reads. The resulting assembly was refined using Pilon supported by short reads (80 × and checked for accuracy by congruency against an independent short read assembly. We scaffolded the assembly using the exon–gene models derived from 9805 full-length open reading frames (FL-ORFs constructed from the beaver leukocyte and muscle transcriptomes. The final assembly comprised 22,515 contigs with an N50 of 278,680 bp and an N50-scaffold of 317,558 bp. Maximum contig and scaffold lengths were 3.3 and 4.2 Mb, respectively, with a combined scaffold length representing 92% of the estimated genome size. The completeness and accuracy of the scaffold assembly was demonstrated by the precise exon placement for 91.1% of the 9805 assembled FL-ORFs and 83.1% of the BUSCO (Benchmarking Universal Single-Copy Orthologs gene set used to assess the quality of genome assemblies. Well-represented were genes involved in dentition and enamel deposition, defining characteristics of rodents with which the beaver is well-endowed. The study provides insights for genome assembly and an important genomics resource for Castoridae and rodent evolutionary biology.

  14. Bacterial and Archaeal Diversity in the Gastrointestinal Tract of the North American Beaver (Castor canadensis).

    Science.gov (United States)

    Gruninger, Robert J; McAllister, Tim A; Forster, Robert J

    2016-01-01

    The North American Beaver (Castor canadensis) is the second largest living rodent and an iconic symbol of Canada. The beaver is a semi-aquatic browser whose diet consists of lignocellulose from a variety of plants. The beaver is a hindgut fermenter and has an enlarged ceacum that houses a complex microbiome. There have been few studies examining the microbial diversity in gastrointestinal tract of hindgut fermenting herbivores. To examine the bacterial and archaeal communities inhabiting the gastrointestinal tract of the beaver, the microbiome of the ceacum and feaces was examined using culture-independent methods. DNA from the microbial community of the ceacum and feaces of 4 adult beavers was extracted, and the16S rRNA gene was sequenced using either bacterial or archaeal specific primers. A total of 1447 and 1435 unique bacterial OTUs were sequenced from the ceacum and feaces, respectively. On average, the majority of OTUs within the ceacum were classified as Bacteroidetes (49.2%) and Firmicutes (47.6%). The feaces was also dominated by OTUs from Bacteroidetes (36.8%) and Firmicutes (58.9%). The composition of bacterial community was not significantly different among animals. The composition of the ceacal and feacal microbiome differed, but this difference is due to changes in the abundance of closely related OTUs, not because of major differences in the taxonomic composition of the communities. Within these communities, known degraders of lignocellulose were identified. In contrast, to the bacterial microbiome, the archaeal community was dominated by a single species of methanogen, Methanosphaera stadtmanae. The data presented here provide the first insight into the microbial community within the hindgut of the beaver.

  15. Chemical composition and anti-herpes simplex virus type 1 (HSV-1) activity of extracts from Cornus canadensis.

    Science.gov (United States)

    Lavoie, Serge; Côté, Isabelle; Pichette, André; Gauthier, Charles; Ouellet, Michaël; Nagau-Lavoie, Francine; Mshvildadze, Vakhtang; Legault, Jean

    2017-02-22

    Many plants of boreal forest of Quebec have been used by Native Americans to treat a variety of microbial infections. However, the antiviral activities of these plants have been seldom evaluated on cellular models to validate their in vitro efficiencies. In this study, Cornus canadensis L. (Cornaceae), a plant used in Native American traditional medicine to treat possible antiviral infections, has been selected for further examination. The plant was extracted by decoction and infusion with water, water/ethanol 1:1 and ethanol to obtain extracts similar to those used by Native Americans. The effects of the extracts were tested on herpes simplex virus type-1 (HSV-1) using a plaque reduction assay. Moreover, bioassay-guided fractionation was achieved to isolate bioactive compounds. Water/ethanol 1:1 infusion of C. canadensis leaves were the most active extracts to inhibit virus absorption with EC 50 of about 9 μg mL -1 , whereas for direct mode, both extraction methods using water or water/ethanol 1:1 as solvent were relatively similar with EC 50 ranging from 11 to 17 μg mL -1 . The fractionation led to the identification of active fractions containing hydrolysable tannins. Tellimagrandin I was found the most active compound with an EC 50 of 2.6 μM for the direct mode and 5.0 μM for the absorption mode. Altogether, the results presented in this work support the antiviral activity of Cornus canadensis used in Native American traditional medicine.

  16. Impact of water composition on association of Ag and CeO₂ nanoparticles with aquatic macrophyte Elodea canadensis.

    Science.gov (United States)

    Van Koetsem, Frederik; Xiao, Yi; Luo, Zhuanxi; Du Laing, Gijs

    2016-03-01

    In this study, the potential association of (citrate-stabilized) Ag (14.1 ± 1.0 nm) and CeO2 (6.7 ± 1.2 nm) engineered nanoparticles (ENPs), or their ionic counterparts, with the submerged aquatic plant Elodea canadensis, was examined and, in particular, parameters affecting the distribution of the nanoparticles (or metal ions) between plant biomass and the water phase were assessed using five distinct aqueous matrices (i.e. tap water, 10 % Hoagland's solution and three natural surface water samples). Individual plants were exposed to varying concentrations of Ag and CeO2 ENPs or Ag(+) and Ce(3+) ions during 72-h-lasting batch experiments. A dose-dependent increase of silver or cerium in plant biomass was observed for both the nanoparticles and the ions, whereby exposure to the latter systematically resulted in significantly higher biomass concentrations. Furthermore, the apparent plant uptake of CeO2 ENPs appeared to be higher than that for Ag ENPs when comparing similar exposure concentrations. These findings suggest that association with E. canadensis might be affected by particle characteristics such as size, composition, surface charge or surface coating. Moreover, the stability of the ENPs or ions in suspension/solution may be another important aspect affecting plant exposure and uptake. The association of the nanoparticles or ions with E. canadensis was affected by the physicochemical characteristics of the water sample. The silver biomass concentration was found to correlate significantly with the electrical conductivity (EC), dry residue (DR) and Cl(-), K, Na and Mg content in the case of Ag ENPs or with the EC, inorganic carbon (IC) and Cl(-), NO3 (-), Na and Mg content in the case of Ag(+) ions, whereas significant relationships between the cerium biomass concentration and the EC, DR, IC and Ca content or the pH, EC, DR, IC and Cl(-), Ca and Mg content were obtained for CeO2 ENPs or Ce(3+) ions, respectively. Results also indicated that the Ag

  17. Selecting habitat to survive: the impact of road density on survival in a large carnivore.

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    Mathieu Basille

    Full Text Available Habitat selection studies generally assume that animals select habitat and food resources at multiple scales to maximise their fitness. However, animals sometimes prefer habitats of apparently low quality, especially when considering the costs associated with spatially heterogeneous human disturbance. We used spatial variation in human disturbance, and its consequences on lynx survival, a direct fitness component, to test the Hierarchical Habitat Selection hypothesis from a population of Eurasian lynx Lynx lynx in southern Norway. Data from 46 lynx monitored with telemetry indicated that a high proportion of forest strongly reduced the risk of mortality from legal hunting at the home range scale, while increasing road density strongly increased such risk at the finer scale within the home range. We found hierarchical effects of the impact of human disturbance, with a higher road density at a large scale reinforcing its negative impact at a fine scale. Conversely, we demonstrated that lynx shifted their habitat selection to avoid areas with the highest road densities within their home ranges, thus supporting a compensatory mechanism at fine scale enabling lynx to mitigate the impact of large-scale disturbance. Human impact, positively associated with high road accessibility, was thus a stronger driver of lynx space use at a finer scale, with home range characteristics nevertheless constraining habitat selection. Our study demonstrates the truly hierarchical nature of habitat selection, which aims at maximising fitness by selecting against limiting factors at multiple spatial scales, and indicates that scale-specific heterogeneity of the environment is driving individual spatial behaviour, by means of trade-offs across spatial scales.

  18. Caracterización fármaco-toxicológica de la planta medicinal Sambucus nigra subsp. canadensis (L. R. Bolli Pharmaceutical-toxicological characterization of medicinal plant Sambucus nigra subsp. canadensis (L. R. Bolli

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    Oneyda Clapé Laffita

    2011-12-01

    Full Text Available El objetivo de la monografía consistió en la caracterización fármaco-toxicológica de Sambucus nigra subsp. canadensis (L. R. Bolli, planta tradicional cubana con actividad antiinflamatoria, entre otras. Se presentan aspectos farmacológicos como composición fitoquímica, propiedades atribuidas popularmente y comprobadas científicamente, posología, reacciones adversas, advertencias, interacciones, toxicidad, precauciones y contraindicaciones. Se concluye que con la monografía fármaco-toxicológica de esta planta medicinal, se dispone de una completa información, como documentación indispensable para actualizar las bases de datos nacionales e internacionales al respecto, con vistas a desarrollar nuevos fitofármacos, en especial antiinflamatorios con bajo potencial de efectos adversos.The objective of the monograph was the pharmacological and toxicological characterization of Sambucus nigra subspecies canadensis(L. R. Bolli, a Cuban traditional plant with anti-inflammatory action, among others. Several pharmacological aspects such as phytochemical composition; scientifically tested properties attributed by the population; posology; adverse reactions; warnings; interactions; toxicity; precautions and counterindications were presented. It was concluded that the pharmaceutical and toxicological monograph of this plant provides full information as indispensable documentation to update national and international databases, with a view to developing new pharmaceuticals, particularly anti-inflammatory drugs with low adverse effect potential.

  19. Signatures of self-assembly in size distributions of wood members in dam structures of Castor canadensis

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    David M. Blersch

    2014-12-01

    Full Text Available Beavers (Castor canadensis construct dams on rivers throughout most of their historical range in North America, and their impact on water patterns in the landscape is considerable. Dam formation by beavers involves two processes: (1 intentional construction through the selection and placement of wood and sediment, which facilitates (2 the passive capture and accretion of suspended wood and sediment. The second process is a self-assembly mechanism that the beavers leverage by utilizing energy subsidies of watershed transport processes. The relative proportion of beaver activity to self-assembly processes in dam construction, however, is unknown. Here we show that lotic self-assembly processes account for a substantial portion of the work expended in beaver dam construction. We found through comprehensive measurement of the stick dimensions that the distributions for diameter, length, and volume are log-normal. By noting evidence of teeth markings, we determined that size distributions skewed significantly larger for wood handled by beavers compared to those that were not. Subsequent mass calculations suggest that beavers perform 50%–70% of the work of wood member placement for dam assembly, with riparian self-assembly processes contributing the remainder. Additionally, our results establish a benchmark for assessing the proportion of self-assembly work in similar riparian structures. Keywords: Beaver dam, Construction, Castor canadensis, Self-assembly, Distribution, Wood

  20. An individual-based modelling approach to estimate landscape connectivity for bighorn sheep (Ovis canadensis

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    Corrie H. Allen

    2016-05-01

    Full Text Available Background. Preserving connectivity, or the ability of a landscape to support species movement, is among the most commonly recommended strategies to reduce the negative effects of climate change and human land use development on species. Connectivity analyses have traditionally used a corridor-based approach and rely heavily on least cost path modeling and circuit theory to delineate corridors. Individual-based models are gaining popularity as a potentially more ecologically realistic method of estimating landscape connectivity. However, this remains a relatively unexplored approach. We sought to explore the utility of a simple, individual-based model as a land-use management support tool in identifying and implementing landscape connectivity. Methods. We created an individual-based model of bighorn sheep (Ovis canadensis that simulates a bighorn sheep traversing a landscape by following simple movement rules. The model was calibrated for bighorn sheep in the Okanagan Valley, British Columbia, Canada, a region containing isolated herds that are vital to conservation of the species in its northern range. Simulations were run to determine baseline connectivity between subpopulations in the study area. We then applied the model to explore two land management scenarios on simulated connectivity: restoring natural fire regimes and identifying appropriate sites for interventions that would increase road permeability for bighorn sheep. Results. This model suggests there are no continuous areas of good habitat between current subpopulations of sheep in the study area; however, a series of stepping-stones or circuitous routes could facilitate movement between subpopulations and into currently unoccupied, yet suitable, bighorn habitat. Restoring natural fire regimes or mimicking fire with prescribed burns and tree removal could considerably increase bighorn connectivity in this area. Moreover, several key road crossing sites that could benefit from

  1. Disease and predation: sorting out causes of a bighorn sheep (Ovis canadensis decline.

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    Joshua B Smith

    Full Text Available Estimating survival and documenting causes and timing of mortality events in neonate bighorn sheep (Ovis canadensis improves understanding of population ecology and factors influencing recruitment. During 2010-2012, we captured and radiocollared 74 neonates in the Black Hills, South Dakota, of which 95% (70 died before 52 weeks of age. Pneumonia (36% was the leading cause of mortality followed by predation (30%. We used known fate analysis in Program MARK to estimate weekly survival rates and investigate the influence of intrinsic variables on 52-week survival. Model {S1 wk, 2-8 wks, >8 wks} had the lowest AIC c (Akaike's Information Criterion corrected for small sample size value, indicating that age (3-stage age-interval: 1 week, 2-8 weeks, and >8 weeks best explained survival. Weekly survival estimates for 1 week, 2-8 weeks, and >8 weeks were 0.81 (95% CI = 0.70-0.88, 0.86 (95% CI = 0.81-0.90, and 0.94 (95% CI = 0.91-0.96, respectively. Overall probability of surviving 52 weeks was 0.02 (95% CI = 0.01-0.07. Of 70 documented mortalities, 21% occurred during the first week, 55% during weeks 2-8, and 23% occurred >8 weeks of age. We found pneumonia and predation were temporally heterogeneous with lambs most susceptible to predation during the first 2-3 weeks of life, while the greatest risk from pneumonia occurred from weeks 4-8. Our results indicated pneumonia was the major factor limiting recruitment followed by predation. Mortality from predation may have been partly compensatory to pneumonia and its effects were less pronounced as alternative prey became available. Given the high rates of pneumonia-caused mortality we observed, and the apparent lack of pneumonia-causing pathogens in bighorn populations in the western Black Hills, management activities should be geared towards eliminating contact between diseased and healthy populations.

  2. Disease and predation: Sorting out causes of a bighorn sheep (Ovis canadensis) decline

    Science.gov (United States)

    Smith, Joshua B.; Jenks, Jonathan A.; Grovenburg, Troy W.; Klaver, Robert W.

    2014-01-01

    Estimating survival and documenting causes and timing of mortality events in neonate bighorn sheep (Ovis canadensis) improves understanding of population ecology and factors influencing recruitment. During 2010–2012, we captured and radiocollared 74 neonates in the Black Hills, South Dakota, of which 95% (70) died before 52 weeks of age. Pneumonia (36%) was the leading cause of mortality followed by predation (30%). We used known fate analysis in Program MARK to estimate weekly survival rates and investigate the influence of intrinsic variables on 52-week survival. Model {S1 wk, 2–8 wks, >8 wks} had the lowest AICc (Akaike’s Information Criterion corrected for small sample size) value, indicating that age (3-stage age-interval: 1 week, 2–8 weeks, and >8 weeks) best explained survival. Weekly survival estimates for 1 week, 2–8 weeks, and >8 weeks were 0.81 (95% CI = 0.70–0.88), 0.86 (95% CI = 0.81–0.90), and 0.94 (95% CI = 0.91–0.96), respectively. Overall probability of surviving 52 weeks was 0.02 (95% CI = 0.01–0.07). Of 70 documented mortalities, 21% occurred during the first week, 55% during weeks 2–8, and 23% occurred >8 weeks of age. We found pneumonia and predation were temporally heterogeneous with lambs most susceptible to predation during the first 2–3 weeks of life, while the greatest risk from pneumonia occurred from weeks 4–8. Our results indicated pneumonia was the major factor limiting recruitment followed by predation. Mortality from predation may have been partly compensatory to pneumonia and its effects were less pronounced as alternative prey became available. Given the high rates of pneumonia-caused mortality we observed, and the apparent lack of pneumonia-causing pathogens in bighorn populations in the western Black Hills, management activities should be geared towards eliminating contact between diseased and healthy populations.

  3. Complete chloroplast genome sequence of Elodea canadensis and comparative analyses with other monocot plastid genomes.

    Science.gov (United States)

    Huotari, Tea; Korpelainen, Helena

    2012-10-15

    Elodea canadensis is an aquatic angiosperm native to North America. It has attracted great attention due to its invasive nature when transported to new areas in its non-native range. We have determined the complete nucleotide sequence of the chloroplast (cp) genome of Elodea. Taxonomically Elodea is a basal monocot, and only few monocot cp genomes representing early lineages of monocots have been sequenced so far. The genome is a circular double-stranded DNA molecule 156,700 bp in length, and has a typical structure with large (LSC 86,194 bp) and small (SSC 17,810 bp) single-copy regions separated by a pair of inverted repeats (IRs 26,348 bp each). The Elodea cp genome contains 113 unique genes and 16 duplicated genes in the IR regions. A comparative analysis showed that the gene order and organization of the Elodea cp genome is almost identical to that of Amborella trichopoda, a basal angiosperm. The structure of IRs in Elodea is unique among monocot species with the whole cp genome sequenced. In Elodea and another monocot Lemna minor the borders between IRs and LSC are located upstream of rps 19 gene and downstream of trnH-GUG gene, while in most monocots, IR has extended to include both trnH and rps 19 genes. A phylogenetic analysis conducted using Bayesian method, based on the DNA sequences of 81 chloroplast genes from 17 monocot taxa provided support for the placement of Elodea together with Lemna as a basal monocot and the next diverging lineage of monocots after Acorales. In comparison with other monocots, the Elodea cp genome has gone through only few rearrangements or gene losses. IR of Elodea has a unique structure among the monocot species studied so far as its structure is similar to that of a basal angiosperm Amborella. This result together with phylogenetic analyses supports the placement of Elodea as a basal monocot to the next diverging lineage of monocots after Acorales. So far, only few cp genomes representing early lineages of monocots have been

  4. Isolation of viable Toxoplasma gondii, molecular characterization, and seroprevalence in elk (Cervus canadensis) in Pennsylvania, USA.

    Science.gov (United States)

    Dubey, J P; Brown, J; Verma, S K; Cerqueira-Cézar, C K; Banfield, J; Kwok, O C H; Ying, Y; Murata, F H A; Pradhan, A K; Su, C

    2017-08-30

    Toxoplasmosis is a worldwide zoonosis. The ingestion of uncooked/undercooked meat and consumption of water contaminated with Toxoplasma gondii oocysts excreted by felids are the main modes of transmission of this parasite. T. gondii has been reported in multiple cervid species; however, little is known of the parasite in North American elk (Cervus canadensis). In the present study, antibodies to T. gondii were detected in serum of wild elk from Pennsylvania collected during 2013-2016 by the modified agglutination test (MAT, cut-off 1:25); 221 of 317 (69.7%) had MAT titers of 1:25 in 19, 1:50 in 28, 1:100 in 34, and 1:200 or higher in 140. Thus most (44.1%) elk had relatively high titers. Seroprevalence was slightly higher in males (76.9%) than females (67.5%, not statistically significant, Chi-square tests, P<0.0001) and was higher in adults (76.5%) than yearlings (46.4%, Odds ratio 3.82; 95% CL 1.72-8.47; P=0.001) or calves (21.7%, Odds ratio 12.58; 95% CL 4.51-35.10; P<0.0001). Annual seroprevalence was relatively stable throughout the period tested and ranged from 66.6% to 72.2%. Of the 101 elk harvested in 2016, hearts were bioassayed from 20 elk and tongues were bioassayed from 56; all tongue samples were negative. Viable T. gondii was isolated from hearts of two female elk, one of these was a seronegative adult and the other was a calf with no serum available for testing. Both T. gondii isolates were cultivated in cell culture and DNA derived from tachyzoites was characterized using the PCR-RFLP markers including SAG1, SAG2 (5'- 3'SAG2 and altSAG2), SAG3, BTUB, GRA6, c22-8, c29-2, L358, PK1, and Apico. One isolate belongs to ToxoDB PCR-RFLP genotype #2 and the other is genotype #5. Both genotypes are frequently identified in animals in North America. Copyright © 2017. Published by Elsevier B.V.

  5. Toxicity and hazard of vanadium to mallard ducks (Anas platyrhynchos) and Canada geese (Branta canadensis)

    Science.gov (United States)

    Rattner, Barnett A.; McKernan, Moira A.; Eisenreich, Karen M.; Link, William A.; Olsen, Glenn H.; Hoffman, David J.; Knowles, K.A.; McGowan, Peter C.

    2006-01-01

    A recent Canada goose (Branta canadensis) die-off at a petroleum refinery fly ash pond in Delaware was attributed to vanadium (V) toxicity. Because of the paucity of V toxicity data for wild birds, a series of studies was undertaken using the forms of V believed to have resulted in this incident. In 7-d single oral dose trials with mallard drakes (Anas platyrhynchos), the estimated median lethal dose (LD50) for vanadium pentoxide was 113 mg/kg body weight, while the LD50 for sodium metavanadate was 75.5 mg/kg. Sodium metavanadate was found to be even more potent (LD50 = 37.2 mg/kg) in male Canada geese. The most distinctive histopathological lesion of both forms of V was lympho-granulocytic enteritis with hemorrhage into the intestinal lumen. Vanadium accumulation in liver and kidney was proportional to the administered dose, and predictive analyses based on these data suggest that V concentrations of 10 μg/g dry weight (dw) in liver and 25 μg/g dw in kidney are associated with mortality (>90% confidence that exposure is >LD50) in mallards acutely exposed to sodium metavanadate. Chronic exposure to increasing dietary concentrations of sodium metavanadate (38.5 to 2651 ppm) over 67 d resulted in V accumulation in liver and kidney (25.2 and 13.6 μg/g dw, respectively), mild intestinal hemorrhage, blood chemistry changes, and evidence of hepatic oxidative stress in mallards, although some of these responses may have been confounded by food avoidance and weight loss. Dietary exposure of mallards to 250 ppm sodium metavanadate for 4 wk resulted in modest accumulation of V in liver and kidney (<5 μg/g dw) and mild intestinal hemorrhage. Based on these data and other observations, it is unlikely that chronic low-level dietary exposure to V poses a direct lethal hazard to wildlife. However, point sources, such as the V-laden fly ash pond encountered by geese at the petroleum refinery in Delaware, may pose a significant hazard to water birds.

  6. In vitro prion protein conversion suggests risk of bighorn sheep (Ovis canadensis) to transmissible spongiform encephalopathies

    Science.gov (United States)

    Johnson, Christopher J.; Morawski, A.R.; Carlson, C.M.; Chang, H.

    2013-01-01

    Background: Transmissible spongiform encephalopathies (TSEs) affect both domestic sheep (scrapie) and captive and free-ranging cervids (chronic wasting disease; CWD). The geographical range of bighorn sheep (Ovis canadensis; BHS) overlaps with states or provinces that have contained scrapie-positive sheep or goats and areas with present epizootics of CWD in cervids. No TSEs have been documented in BHS, but the susceptibility of this species to TSEs remains unknown. Results: We acquired a library of BHS tissues and found no evidence of preexisting TSEs in these animals. The prion protein gene (Prnp) in all BHS in our library was identical to scrapie-susceptible domestic sheep (A136R 154Q171). Using an in vitro prion protein conversion assay, which has been previously used to assess TSE species barriers and, in our study appears to recollect known species barriers in mice, we assessed the potential transmissibility of TSEs to BHS. As expected based upon Prnp genotype, we observed BHS prion protein conversion by classical scrapie agent and evidence for a species barrier between transmissible mink encephalopathy (TME) and BHS. Interestingly, our data suggest that the species barrier of BHS to white-tailed deer or wapiti CWD agents is likely low. We also used protein misfolding cyclic amplification to confirm that CWD, but not TME, can template prion protein misfolding in A136R 154Q171genotype sheep. Conclusions: Our results indicate the in vitro conversion assay used in our study does mimic the species barrier of mice to the TSE agents that we tested. Based on Prnp genotype and results from conversion assays, BHS are likely to be susceptible to infection by classical scrapie. Despite mismatches in amino acids thought to modulate prion protein conversion, our data indicate that A136R154Q171 genotype sheep prion protein is misfolded by CWD agent, suggesting that these animals could be susceptible to CWD. Further investigation of TSE transmissibility to BHS, including

  7. First report of powdery mildew caused by Golovinomyces sp. (Euoidium sp. on the exotic ornamental plant Solidago canadensis (Asterales: Asteraceae in India

    Directory of Open Access Journals (Sweden)

    Sachin V. Thite

    2014-11-01

    Full Text Available In September 2013, leaves of Solidagocanadensis with typical symptoms of powdery mildew were collected in the Botanical Garden of Yashvantrao Chavan Institute of Science, Satara (M.S, India. The pathogen was identified as Euoidiumanamoph of Golovinomyces. This is the first report of powdery mildew on S. canadensis in India.

  8. Molecular detection of Campylobacter spp. and fecal indicator bacteria during the northern migration of Sandhill Cranes (Grus canadensis) at the Central Platte River

    Science.gov (United States)

    The annual Sandhill crane (Grus canadensis) migration through Nebraska is thought to be a major source of fecal pollution to the Platte River, but of unknown human health risk. To better understand potential risks, the presence of Campylobacter species and fecal bacteria were exa...

  9. Echinococcus canadensis (Cestoda: Taeniidae) is a valid species consisting of the mitochondrial genotypes G6, G7, G8 and G10

    Science.gov (United States)

    The species status of Echinococcus canadensis has long been controversial, mainly because it consists of the mitochondrial genotypes G6, G7, G8 and G10 with different host affinity: G6 (camel strain) and G7 (pig strain) with domestic cycles and G8 (cervid strain) and G10 (Fennoscandian cervid strain...

  10. Vaccination of elk (Cervus canadensis) with Brucella abortus strain RB51 overexpressing superoxide dismutase and glycosyltransferase genes does not induce adequate protection against experimental brucella abortus challenge

    Science.gov (United States)

    In recent years, elk (Cervus canadensis) have been implicated as the source of Brucella abortus infection for numerous cattle herds in the Greater Yellowstone Area (GYA). In the face of environmental and ecological changes on the landscape, the range of infected elk is expanding. Consequently, the d...

  11. Antigen detection, rabies virus isolation, and Q-PCR in the quantification of viral load in a natural infection of the North American beaver (Castor canadensis).

    Science.gov (United States)

    Morgan, Shannon M D; Pouliott, Craig E; Rudd, Robert J; Davis, April D

    2015-01-01

    All mammals are believed susceptible to rabies virus infection, yet transmission from nonreservoir hosts to humans is uncommon. However, interactions between nonreservoir hosts and humans occur frequently and risk of exposure increases where rabies is enzootic. We describe rabies and apparent pantropism of rabies virus in a beaver (Castor canadensis).

  12. Macro-scale assessment of demographic and environmental variation within genetically derived evolutionary lineages of eastern hemlock (Tsuga canadensis), an imperiled conifer of the eastern United States

    Science.gov (United States)

    Anantha M. Prasad; Kevin M. Potter

    2017-01-01

    Eastern hemlock (Tsuga canadensis) occupies a large swath of eastern North America and has historically undergone range expansion and contraction resulting in several genetically separate lineages. This conifer is currently experiencing mortality across most of its range following infestation of a non-native insect. With the goal of better...

  13. The allelopathic effects of invasive plant Solidago canadensis on seed germination and growth of Lactuca sativa enhanced by different types of acid deposition.

    Science.gov (United States)

    Wang, Congyan; Xiao, Hongguang; Zhao, Lulu; Liu, Jun; Wang, Lei; Zhang, Fei; Shi, Yanchun; Du, Daolin

    2016-04-01

    Invasive species can exhibit allelopathic effects on native species. Meanwhile, the types of acid deposition are gradually changing. Thus, the allelopathic effects of invasive species on seed germination and growth of native species may be altered or even enhanced under conditions with diversified acid deposition. This study aims to assess the allelopathic effects (using leaves extracts) of invasive plant Solidago canadensis on seed germination and growth of native species Lactuca sativa treated with five types of acid deposition with different SO4(2-) to NO3(-) ratios (1:0, sulfuric acid; 5:1, sulfuric-rich acid; 1:1, mixed acid; 1:5, nitric-rich acid; 0:1, nitric acid). Solidago canadensis leaf extracts exhibited significantly allelopathic effects on germination index, vigor index, and germination rate index of L. sativa. High concentration of S. canadensis leaf extracts also similarly exhibited significantly allelopathic effects on root length of L. sativa. This may be due to that S. canadensis could release allelochemicals and then trigger allelopathic effects on seed germination and growth of L. sativa. Acid deposition exhibited significantly negative effects on seedling biomass, root length, seedling height, germination index, vigor index, and germination rate index of L. sativa. This may be ascribed to the decreased soil pH values mediated by acid deposition which could produce toxic effects on seedling growth. Sulfuric acid deposition triggered more toxic effects on seedling biomass and vigor index of L. sativa than nitric acid deposition. This may be attributing to the difference in exchange capacity with hydroxyl groups (OH(-)) between SO4(2-) and NO3(-) as well as the fertilizing effects mediated by nitric deposition. All types of acid deposition significantly enhanced the allelopathic effects of S. canadensis on root length, germination index, vigor index, and germination rate index of L. sativa. This may be due to the negatively synergistic effects of

  14. Molecular characterization of Echinococcus isolates indicates goats as reservoir for Echinococcus canadensis G6 genotype in Neuquén, Patagonia Argentina.

    Science.gov (United States)

    Soriano, S V; Pierangeli, N B; Pianciola, L; Mazzeo, M; Lazzarini, L E; Saiz, M S; Kossman, A V; Bergagna, H F J; Chartier, K; Basualdo, J A

    2010-12-01

    Human cystic echinococcosis is a highly endemic zoonotic disease in the province of Neuquén, Patagonia Argentina, although a hydatid control programme has been carried out since 1970. Human infection due to Echinococcus canadensis (G6 genotype) is frequent in Neuquén. However, the reservoir for this species remains undetermined in a region where camels are absent. We investigated the fertility, viability and molecular epidemiology of hydatid cysts obtained from local goats, pigs and sheep in order to identify the possible reservoirs of E. canadensis (G6). We also analyzed isolates from infected dogs. A total of 67 isolates were identified by the DNA sequencing of the mitochondrial cytochrome c oxidase subunit 1 gene. Cysts from sheep (n=16), goats (n=23) and pigs (n=18) and adult worms from 10 infected dogs were analyzed. The fertility of the hydatid cysts was 78.6%; 90.4% and 94.4% for sheep, goats and pigs, respectively. We detected E. canadensis (G6) in 21 of 23 goat samples and in 1 dog isolate, E. canadensis (G7) in all the pig isolates, E. granulosus sensu stricto (G3) in 1 sheep and the G1 genotype in 15 sheep, 2 goats and 9 dog samples. The G1 haplotypes included the common sheep strain sequence and 2 microvariants of this sequence. E. granulosus sensu stricto (G3) is described for the first time in South America. We conclude that goats act as reservoir for E. canadensis (G6) in Neuquén, and that control strategies may have to be adapted to local molecular epidemiology to improve the control of parasite transmission. Copyright © 2010 Elsevier Ireland Ltd. All rights reserved.

  15. Sinks without borders: Snowshoe hare dynamics in a complex landscape

    Science.gov (United States)

    Griffin, Paul C.; Mills, L. Scott

    2009-01-01

    A full understanding of population dynamics of wide-ranging animals should account for the effects that movement and habitat use have on individual contributions to population growth or decline. Quantifying the per-capita, habitat-specific contribution to population growth can clarify the value of different patch types, and help to differentiate population sources from population sinks. Snowshoe hares, Lepus americanus, routinely use various habitat types in the landscapes they inhabit in the contiguous US, where managing forests for high snowshoe hare density is a priority for conservation of Canada lynx, Lynx canadensis. We estimated density and demographic rates via mark–recapture live trapping and radio-telemetry within four forest stand structure (FSS) types at three study areas within heterogeneous managed forests in western Montana. We found support for known fate survival models with time-varying individual covariates representing the proportion of locations in each of the FSS types, with survival rates decreasing as use of open young and open mature FSS types increased. The per-capita contribution to overall population growth increased with use of the dense mature or dense young FSS types and decreased with use of the open young or open mature FSS types, and relatively high levels of immigration appear to be necessary to sustain hares in the open FSS types. Our results support a conceptual model for snowshoe hares in the southern range in which sink habitats (open areas) prevent the buildup of high hare densities. More broadly, we use this system to develop a novel approach to quantify demographic sources and sinks for animals making routine movements through complex fragmented landscapes.

  16. (+)-(10R)-Germacrene A synthase from goldenrod, Solidago canadensis; cDNA isolation, bacterial expression and functional analysis.

    Science.gov (United States)

    Prosser, Ian; Phillips, Andy L; Gittings, Simon; Lewis, Mervyn J; Hooper, Antony M; Pickett, John A; Beale, Michael H

    2002-08-01

    Profiling of sesquiterpene hydrocarbons in extracts of goldenrod, Solidago canadensis, by GC-MS revealed the presence of both enantiomers of germacrene D and lesser amounts of germacrene A, alpha-humulene, and beta-caryophyllene. A similarity-based cloning strategy using degenerate oligonucleotide primers, based on conserved amino acid sequences in known plant sesquiterpene synthases and RT-PCR, resulted in the isolation of a full length sesquiterpene synthase cDNA. Functional expression of the cDNA in E. coli, as an N-terminal thioredoxin fusion protein using the pET32b vector yielded an enzyme that was readily purified by nickel-chelate affinity chromatography. Chiral GC-MS analysis of products from of (3)H- and (2)H-labelled farnesyl diphosphate identified the enzyme as (+)-(10R)-germacrene A synthase. Sequence analysis and molecular modelling was used to compare this enzyme with the mechanistically related epi-aristolochene synthase from tobacco.

  17. Decomposition of Phragmites australis litter retarded by invasive Solidago canadensis in mixtures: an antagonistic non-additive effect

    Science.gov (United States)

    Zhang, Ling; Zhang, Yaojun; Zou, Jianwen; Siemann, Evan

    2014-06-01

    Solidago canadensis is an aggressive invader in China. Solidago invasion success is partially attributed to allelopathic compounds release and more benefits from AM fungi, which potentially makes the properties of Solidago litter different from co-occurring natives. These properties may comprehensively affect litter decomposition of co-occurring natives. We conducted a field experiment to examine litter mixing effects in a Phragmites australis dominated community invaded by Solidago in southeast China. Solidago had more rapid mass and N loss rate than Phragmites when they decomposed separately. Litter mixing decreased N loss rate in Phragmites litter and increased that of Solidago. Large decreases in Phragmites mass loss and smaller increases in Solidago mass loss caused negative non-additive effect. Solidago litter extracts reduced soil C decomposition and N processes, suggested an inhibitory effect of Solidago secondary compounds. These results are consistent with the idea that nutrient transfer and secondary compounds both affected litter mixtures decomposition.

  18. Survival of bighorn sheep (Ovis canadensis) commingled with domestic sheep (Ovis aries) in the absence of Mycoplasma ovipneumoniae.

    Science.gov (United States)

    Besser, Thomas E; Cassirer, E Frances; Yamada, Catherine; Potter, Kathleen A; Herndon, Caroline; Foreyt, William J; Knowles, Donald P; Srikumaran, Subramaniam

    2012-01-01

    To test the hypothesis that Mycoplasma ovipneumoniae is an important agent of the bighorn sheep (Ovis canadensis) pneumonia that has previously inevitably followed experimental commingling with domestic sheep (Ovis aries), we commingled M. ovipneumoniae-free domestic and bighorn sheep (n=4 each). One bighorn sheep died with acute pneumonia 90 days after commingling, but the other three remained healthy for >100 days. This unprecedented survival rate is significantly different (P=0.002) from that of previous bighorn-domestic sheep contact studies but similar to (P>0.05) bighorn sheep survival following commingling with other ungulates. The absence of epizootic respiratory disease in this experiment supports the hypothesized role of M. ovipneumoniae as a key pathogen of epizootic pneumonia in bighorn sheep commingled with domestic sheep.

  19. Long-term structural and biomass dynamics of virgin Tsuga canadensis-Pinus strobus forests after hurricane disturbance.

    Science.gov (United States)

    D'Amato, Anthony W; Orwig, David A; Foster, David R; Barker Plotkin, Audrey; Schoonmaker, Peter K; Wagner, Maggie R

    2017-03-01

    The development of old-growth forests in northeastern North America has largely been within the context of gap-scale disturbances given the rarity of stand-replacing disturbances. Using the 10-ha old-growth Harvard Tract and its associated 90-year history of measurements, including detailed surveys in 1989 and 2009, we document the long-term structural and biomass development of an old-growth Tsuga canadensis-Pinus strobus forest in southern New Hampshire, USA following a stand-replacing hurricane in 1938. Measurements of aboveground biomass pools were integrated with data from second- and old-growth T. canadensis forests to evaluate long-term patterns in biomass development following this disturbance. Ecosystem structure across the Tract prior to the hurricane exhibited a high degree of spatial heterogeneity with the greatest levels of live tree basal area (70-129 m 2 /ha) on upper west-facing slopes where P. strobus was dominant and intermixed with T. canadensis. Live-tree biomass estimates for these stratified mixtures ranged from 159 to 503 Mg/ha at the localized, plot scale (100 m 2 ) and averaged 367 Mg/ha across these portions of the landscape approaching the upper bounds for eastern forests. Live-tree biomass 71 years after the hurricane is more uniform and lower in magnitude, with T. canadensis currently the dominant overstory tree species throughout much of the landscape. Despite only one living P. strobus stem in the 2009 plots (and fewer than five stems known across the entire 10-ha area), the detrital legacy of this species is pronounced with localized accumulations of coarse woody debris exceeding 237.7-404.2 m 3 /ha where this species once dominated the canopy. These patterns underscore the great sizes P. strobus attained in pre-European landscapes and its great decay resistance relative to its forest associates. Total aboveground biomass pools in this 71-year-old forest (255 Mg/ha) are comparable to those in modern old-growth ecosystems

  20. Assessment of a new Bacteroidales marker targeting North American beaver (Castor canadensis) fecal pollution by real-time PCR.

    Science.gov (United States)

    Marti, Romain; Zhang, Yun; Tien, Yuan-Ching; Lapen, David R; Topp, Edward

    2013-11-01

    In many settings wildlife can be a significant source of fecal pathogen input into surface water. The North American beaver (Castor canadensis) is a zoonotic reservoir for several human pathogens including Cryptosporidium spp. and Giardia spp. In order to specifically detect fecal pollution by beavers, we have developed and validated a beaver-specific Bacteroidales marker, designated Beapol01, based on the 16S rRNA gene. The marker is suitable for quantifying pollution using real-time PCR. The specificity and sensitivity of the marker was excellent, Beaver signal was detected in water of a mixed-activity watershed harbouring this rodent. Overall, Beapol01 will be useful for a better understanding of fecal source inputs in drainage basins inhabited by the beaver. © 2013.

  1. EVALUATION OF THE AMERICAN WATERWEED (ELODEA CANADENSIS MICHX. AS SUPPLEMENTAL FOOD FOR THE NOBLE CRAYFISH, ASTACUS ASTACUS

    Directory of Open Access Journals (Sweden)

    D’AGARO E.

    2004-01-01

    Full Text Available We conducted a preliminary study to evaluate the capacity of summerling Astacus astacus to consume the American waterweed (Elodea canadensis Michx..under artificial rearing conditions. Summerling A. astacus (initial b.w.: 0.32 ± 0.02 g were cultured (50 crayfish/m2 in 600l tanks for 89 days. The experimental design was composed of three treatments as follows: control diet (D (crude protein: 40.9% DM; ether extract: 7.4% DM, elodea (E (crude protein: 25.8% DM; ether extract: 1.4% DM and control diet + elodea (D + E with three replicates per treatment. Temperature, dissolved oxygen, and other water parameters were measured weekly (T: 20.1°C; O2: 7.2 mg/l; pH: 7.5; N-NH4: 0.05 mg/l; N-NO2: 0.01 mg/l; N-NO3: 29.9 mg/l. The relative growth rate was significantly (P < 0.01 higher in treatment D + E (195% and D (143% than in E (65%. The reduced growth observed in crayfish fed elodea only can probably be due to the lower dietary lipid level of the plant respect to the standard crayfish requirements. At the end of the experiment, the survival rate of A. astacus was higher (P < 0.05 for the treatment D + E (87% and D (81%, compared to E (56%. Our results suggest that E. canadensis can be used as a non-expensive supplemental food in order to increase growth and survival in summerling noble crayfish. They also showed that A. astacus has the potential to consume this macrophyte in nature.

  2. RNA sequencing of Populus x canadensis roots identifies key molecular mechanisms underlying physiological adaption to excess zinc.

    Directory of Open Access Journals (Sweden)

    Andrea Ariani

    Full Text Available Populus x canadensis clone I-214 exhibits a general indicator phenotype in response to excess Zn, and a higher metal uptake in roots than in shoots with a reduced translocation to aerial parts under hydroponic conditions. This physiological adaptation seems mainly regulated by roots, although the molecular mechanisms that underlie these processes are still poorly understood. Here, differential expression analysis using RNA-sequencing technology was used to identify the molecular mechanisms involved in the response to excess Zn in root. In order to maximize specificity of detection of differentially expressed (DE genes, we consider the intersection of genes identified by three distinct statistical approaches (61 up- and 19 down-regulated and validate them by RT-qPCR, yielding an agreement of 93% between the two experimental techniques. Gene Ontology (GO terms related to oxidation-reduction processes, transport and cellular iron ion homeostasis were enriched among DE genes, highlighting the importance of metal homeostasis in adaptation to excess Zn by P. x canadensis clone I-214. We identified the up-regulation of two Populus metal transporters (ZIP2 and NRAMP1 probably involved in metal uptake, and the down-regulation of a NAS4 gene involved in metal translocation. We identified also four Fe-homeostasis transcription factors (two bHLH38 genes, FIT and BTS that were differentially expressed, probably for reducing Zn-induced Fe-deficiency. In particular, we suggest that the down-regulation of FIT transcription factor could be a mechanism to cope with Zn-induced Fe-deficiency in Populus. These results provide insight into the molecular mechanisms involved in adaption to excess Zn in Populus spp., but could also constitute a starting point for the identification and characterization of molecular markers or biotechnological targets for possible improvement of phytoremediation performances of poplar trees.

  3. Solidago canadensis L essential oil vapor effectively inhibits Botrytis cinerea growth and preserves postharvest quality of strawberry as a food model system

    OpenAIRE

    Shumin Liu; Xingfeng Shao; Yanzhen Wei; Yonghua Li; Feng Xu; Hongfei Wang

    2016-01-01

    This study investigated the anti-fungal properties of Solidago canadensis L essential oil (SCLEO) against Botrytis cinerea in vitro, and its ability to control gray mold and maintain quality in strawberry fruits. SCLEO exhibited dose-dependent antifungal activity against B. cinerea and profoundly altered mycelial morphology, cellular ultrastructure, and membrane permeability as evaluated by scanning electron microscopy, transmission electron microscopy, and fluorescence microscopy. SCLEO vapo...

  4. Solidago canadensis L. Essential Oil Vapor Effectively Inhibits Botrytis cinerea Growth and Preserves Postharvest Quality of Strawberry as a Food Model System

    OpenAIRE

    Liu, Shumin; Shao, Xingfeng; Wei, Yanzhen; Li, Yonghua; Xu, Feng; Wang, Hongfei

    2016-01-01

    This study investigated the anti-fungal properties of Solidago canadensis L. essential oil (SCLEO) against Botrytis cinerea in vitro, and its ability to control gray mold and maintain quality in strawberry fruits. SCLEO exhibited dose-dependent antifungal activity against B. cinerea and profoundly altered mycelial morphology, cellular ultrastructure, and membrane permeability as evaluated by scanning electron microscopy, transmission electron microscopy, and fluorescence microscopy. SCLEO vap...

  5. Genetic characterization of human hydatid cysts shows coinfection by Echinococcus canadensis G7 and Echinococcus granulosus sensu stricto G1 in Argentina.

    Science.gov (United States)

    Debiaggi, María Florencia; Soriano, Silvia Viviana; Pierangeli, Nora Beatriz; Lazzarini, Lorena Evelina; Pianciola, Luis Alfredo; Mazzeo, Melina Leonor; Moguillansky, Sergio; Farjat, Juan Angel Basualdo

    2017-09-01

    Human cystic echinococcosis caused by the larval stage of Echinococcus granulosus sensu lato (s.l.) is a highly endemic disease in the province of Neuquén, Patagonia, Argentina. Human infections with E. granulosus sensu stricto (s.s.) G1 and Echinococcus canadensis G6 were reported in Neuquén in previous studies, whereas four genotypes were identified in livestock: G1, G3, G6, and G7. The aim of this study was to identify the genotypes of E. granulosus s.l. isolates from humans of Neuquén province, Patagonia, Argentina, through the 2005-2014 period. Twenty six hydatid cysts were obtained from 21 patients. The most frequent locations were the liver and lungs. Single cysts were observed in 81.0% of patients, and combined infection of liver and lungs was detected in 9.5% of cases. Partial sequencing of mitochondrial cytochrome c oxidase subunit 1 (cox1) and NADH dehydrogenase subunit 1 (nad1) genes identified the presence of E. granulosus s.s. G1 (n = 11; 42.3%) including three different partial sequences; E. canadensis G6 (n = 14; 53.8%) and E. canadensis G7 (n = 1; 3.9%). Coinfection with G1 and G7 genotypes was detected in one patient who harbored three liver cysts. Most of the liver cysts corresponded to G1 and G6 genotypes. This study presents the first report in the Americas of a human infection with E. canadensis G7 and the second worldwide report of a coinfection with two different species and genotypes of E. granulosus s.l in humans. The molecular diversity of this parasite should be considered to redesign or improve the control program strategies in endemic regions.

  6. Response and recovery of the macrophytes Elodea canadensis and Myriophyllum spicatum following a pulse exposure to the herbicide iofensulfuron-sodium in outdoor stream mesocosms.

    Science.gov (United States)

    Wieczorek, Matthias V; Bakanov, Nikita; Lagadic, Laurent; Bruns, Eric; Schulz, Ralf

    2017-04-01

    Interest in stream mesocosms has recently revived for higher tier aquatic macrophyte risk assessment of plant protection products mainly because 1) the highest predicted environmental concentrations for the assessment of effects are frequently derived from stream scenarios, and 2) they allow an effect assessment using stream-typical pulse exposures. Therefore, the present stream mesocosm study used an herbicide pulse exposure and evaluated the responses of Elodea canadensis and Myriophyllum spicatum. Macrophytes were exposed for 24 h to 1 μg/L, 3 μg/L, 10 μg/L, and 30 μg/L of the herbicide iofensulfuron-sodium with a subsequent recovery period of 42 d. Biological endpoints were growth rates of the main, side, and total shoot length, the shoot number, the maximum root length, and the dry weight. The total shoot length was identified as the most sensitive endpoint; the growth rate of the total shoot length was inhibited by up to 66% and 45% in M. spicatum and E. canadensis, respectively. The lowest no observed effect concentrations (NOECs) were observed at day 7 and/or day 14 after herbicide treatment and were 1 μg/L for M. spicatum and 3 μg/L for E. canadensis. The no-observed-ecologically-adverse-effect concentrations (NOEAECs) were 10 μg/L and 30 μg/L for M. spicatum and E. canadensis, respectively. Such or similar mesocosm designs are useful to simulate typical stream exposures and estimate herbicide effects on aquatic macrophytes in stream systems. Environ Toxicol Chem 2017;36:1090-1100. © 2016 SETAC. © 2016 SETAC.

  7. Synergistic effect of Eugenia jambolana Linn. and Solidago canadensis Linn. leaf extracts with deltamethrin against the dengue vector Aedes aegypti Linn. at Mysore.

    Science.gov (United States)

    Raghavendra, B S; Prathibha, K P; Vijayan, V A

    2013-06-01

    With the goal in mind to minimize the application of environmentally hazardous chemical insecticides, the larvicidal activity of two plant extracts along with deltamethrin was studied at University of Mysore. The extracts of Solidago canadensis and Eugenia jambolana were employed for working out the synergistic efficacy against Aedes aegypti larvae, as the extracts of both the plants exhibited high efficacy when applied individually. The deltamethrin when analyzed separately, LC50 and LC90 values were 0.00045 and 0.00148 ppm, respectively. Synergistic studies with two plant extracts on deltamethrin revealed S. canadensis as more effective with synergistic factor(SF) of 4.090 for LC50 value and 4.781 for LC90 followed by E. jambolana with SF 1.80 for LC50 and 2.467 for LC90 at 1:1 ratio of the phytoextracts and deltamethrin. Thus, S. canadensis was found to be a better larvicidal and synergistic agent. Combination of phytochemical and insecticide were found to be more effective than insecticides or phytochemicals alone which could be a good ecofriendly and cost-effective approach to reduce the dose of chemicals with high residual effect to be applied in vector control programs.

  8. Variations of selected soil properties in the grass fields invaded and uninvaded by invasive goldenrod (Solidago canadensis L.

    Directory of Open Access Journals (Sweden)

    Baranová Beáta

    2017-06-01

    Full Text Available Although the invasion of exotic plants has been recognised as the serious cause of the biodiversity loss and natural habitats degradation and threat to the ecosystems functions, just the little attention has been paid to the potential impacts of the goldenrod invasion on the soil properties. Equally, currently obtained results are contrary and ambiguous. We tested whether the grass fields invaded and uninvaded by Canadian goldenrod (Solidago canadensis L. differ in pH, soil moisture, organic carbon (Cox, humus and P, K and Mg contents and related the variations to the chosen environmental variables. We did not find significant distinctions of the studied types of habitats in the selected physico-chemical soil properties as well as the relation between the goldenrod invasion and the changes in soil properties. Nevertheless, whereas the soil reaction, soil moisture and Mg content were higher in the invaded soils, the Cox, humus and P and K contents were higher in the uninvaded ones. Doubtless, further attention need to be paid to this problem.

  9. Antibacterial properties of extracts of Solidago canadensis and their potential use as dietary supplements in red swamp crayfish (Procambarus clarkii

    Directory of Open Access Journals (Sweden)

    Manhong YE,Lei ZHANG,Jiaqi GE,Haifeng SUN,Jingjing NI,Shengmei YANG,Wanhong WEI

    2015-12-01

    Full Text Available Canadian goldenrod (Solidago canadensis is one of the most destructive invasive weeds in South-eastern China. To evaluate its potential application as dietary supplement in red swamp crayfish (Procambarus clarkii, the antibacterial properties of aqueous and ethanol extracts of this plant against three major pathogenic bacteria in crayfish aquaculture were examined. Inhibition zone tests and determination of minimum inhibitory concentration revealed that the extracts had lower antibacterial activity than extracts from two traditional medicinal plants that possess antibacterial properties, garlic (Allium sativum and cortex phellodendri (Phellodendron chinense. However, they did exhibit greater antibacterial effects than extracts from another widely used medicinal plant, Sophora flavescens, and an aquatic weed, Alternanthera philoxeroides. Aqueous extracts of Canadian goldenrod gave greater inhibition than the ethanol extracts. Crayfish fed a diet with 2% these aqueous extracts exhibited significantly higher enzyme activity of alkaline phosphatase, catalase and phenoloxidase (P<0.05. Based on the results of this study, we conclude that aqueous extracts of Canadian goldenrod are highly promising for the development of new dietary supplement for use in crayfish aquaculture.

  10. Pathogenicity of West Nile virus and response to vaccination in sandhill cranes (Grus canadensis) using a killed vaccine.

    Science.gov (United States)

    Olsen, Glenn H; Miller, Kimberli J; Docherty, Douglas E; Bochsler, Valerie S; Sileo, Louis

    2009-06-01

    West Nile virus was introduced into the United States in the vicinity of New York, New York, USA in 1999. The virus has since killed large numbers of birds nationwide, especially, but not limited to, crows (Corvus brachyrhinchos). One sandhill crane (Grus canadensis) at the Bridgeport Zoo (Bridgeport, Connecticut, USA) reportedly died from West Nile virus, so sandhill cranes and endangered whooping cranes (Grus americana), both in the wild and in captive breeding colonies at United States Geological Service (USGS) Patuxent Wildlife Research Center (Laurel, Maryland, USA) were considered at risk. A killed vaccine in sandhill cranes was evaluated by vaccinating and then challenging these cranes with live West Nile virus. No sandhill cranes inoculated with the killed vaccine developed significant titers when compared with unvaccinated controls. No sandhill cranes inoculated with the vaccine and challenged with the virus died from West Nile virus infection. In addition, no unvaccinated challenged sandhill cranes died. However, 2 days postchallenge, vaccinated cranes had significantly less viremia (P cranes. Seven days postchallenge vaccinated cranes had significantly less cloacal shedding of the virus (P cranes and significantly less weight loss (P cranes. Vaccinated sandhill cranes developed significantly higher titers 14 days postchallenge and were viremic for shorter periods of time after challenge than unvaccinated individuals. Unvaccinated challenged cranes had glial cell aggregates in both the brain and brain stem areas, and this was not observed in vaccinated challenged cranes or in vaccinated unchallenged cranes.

  11. Haemosporida prevalence and diversity are similar in endangered wild whooping cranes (Grus americana) and sympatric sandhill cranes (Grus canadensis).

    Science.gov (United States)

    Bertram, Miranda R; Hamer, Gabriel L; Hartup, Barry K; Snowden, Karen F; Medeiros, Matthew C; Hamer, Sarah A

    2017-04-01

    The population growth of endangered whooping cranes (Grus americana) is not consistent with species recovery goals, and the impact of parasite infection on whooping crane populations is largely unknown. Disease ecology and epidemiology research of endangered species is often hindered by limited ability to conduct invasive sampling on the target taxa. Accordingly, we hypothesized that sandhill cranes (Grus canadensis) would be a useful surrogate species to investigate the health impacts of Haemosporida infection in whooping cranes. Our goal was to compare the prevalence and diversity of Haemosporida infection between whooping cranes and sandhill cranes. We detected an overall infection prevalence of 83·6% (n = 61) in whooping cranes and 59·6% (n = 47) and 63·6 (n = 22) in two sympatric sandhill crane populations captured in Texas. Prevalence was significantly lower in allopatric sandhill cranes captured in New Mexico (12·1%, n = 33). Haemoproteus antigonis was the most abundant haemoparasite in cranes, present in 57·4% of whooping cranes and 39·2% of sandhill cranes; Plasmodium and Leucocytozoon were present at significantly lower levels. The high prevalence of Haemosporida in whooping cranes and sympatric sandhill cranes, with shared parasite lineages between the two species, supports sandhill cranes as a surrogate species for understanding health threats to endangered whooping cranes.

  12. Nesting ecology of Greater Sandhill Cranes (Grus canadensis tabida) in riparian and palustrine wetlands of eastern Idaho

    Science.gov (United States)

    McWethy, D.B.; Austin, J.E.

    2009-01-01

    Little information exists on breeding Greater Sandhill Cranes (Grus canadensis tabida) in riparian wetlands of the Intermountain West. We examined the nesting ecology of Sandhill Cranes associated with riparian and palustrine wetlands in the Henry's Fork Watershed in eastern Idaho in 2003. We located 36 active crane nests, 19 in riparian wetlands and 17 in palustrine wetlands. Nesting sites were dominated by rushes (Juncus spp.), sedges (Carex spp.), Broad-leaved Cattail (Typha latifolia) and willow (Salix spp.), and adjacent foraging areas were primarily composed of sagebrush (Artemisia spp.), cinquefoil (Potentilla spp.),Rabbitbrush (Ericameria bloomeri) bunch grasses, upland forbs, Quaking Aspen (Populus tremuloides) and cottonwood (Populus spp.). Mean water depth surrounding nests was 23 cm (SD = 22). A majority of nests (61%) were surrounded by vegetation between 3060 cm, 23% by vegetation 60 cm in height. We were able to determine the fate of 29 nests, of which 20 were successful (69%). Daily nest survival was 0.986 (95% LCI 0.963, UCI 0.995), equivalent to a Mayfield nest success of 0.654 (95% LCI 0.324, UCI 0.853). Model selection favored models with the covariates vegetation type, vegetation height, and water depth. Nest survival increased with increasing water depth surrounding nest sites. Mean water depth was higher around successful nests (30 cm, SD = 21) than unsuccessful nests (15 cm, SD 22). Further research is needed to evaluate the relative contribution of cranes nesting in palustrine and riparian wetlands distributed widely across the Intermountain West.

  13. Microbial water quality during the northern migration of Sandhill Cranes (Grus canadensis) at the central Platte River, Nebraska

    Science.gov (United States)

    Moser, Matthew T.

    2014-01-01

    The central Platte River is an important resource in Nebraska. Its water flows among multiple channels and supports numerous beneficial uses such as drinking water, irrigation for agriculture, groundwater recharge, and recreational activities. The central Platte River valley is an important stopover for migratory waterfowl and cranes, such as the Whooping (Grus americana) and Sandhill Cranes (Grus canadensis), in their annual northward traversal of the Central Flyway. Waterfowl, cranes, and other migratory birds moving across international and intercontinental borders may provide long-range transportation for any microbial pathogen they harbor, particularly through the spread of feces. Samples were collected weekly in the study reach from three sites (upstream, middle, and downstream from the roosting locations) during the spring of 2009 and 2010. The samples were analyzed for avian influenza, Escherichia coli, Cryptosporidium, Giardia, Campylobacter, and Legionella. Analysis indicates that several types of fecal indicator bacteria and a range of viral, protozoan, and bacterial pathogens were present in Sandhill Crane excreta. These bacteria and pathogens were present at a significantly higher frequency and densities in water and sediments when the Sandhill Cranes were present, particularly during evening roosts within the Platte River environment.

  14. Polychlorinated biphenyls, organochlorinated pesticides, and polybrominated diphenyl ethers in the cerebral cortex of wild river otters (Lontra canadensis)

    Energy Technology Data Exchange (ETDEWEB)

    Basu, Niladri [National Wildlife Research Center, Canadian Wildlife Service, Environment Canada, Ottawa, Ontario, K1A 0H3 (Canada)]. E-mail: nbasu@uottawa.ca; Scheuhammer, Anton M. [National Wildlife Research Center, Canadian Wildlife Service, Environment Canada, Ottawa, Ontario, K1A 0H3 (Canada); O' Brien, Mike [Furbearers and Upland Game, Nova Scotia Department of Natural Resources, Kentville, Nova Scotia, B4N 4E5 (Canada)

    2007-09-15

    We measured the levels of ortho-substituted polychlorinated biphenyls (PCB), organochlorinated pesticides (OCP), and polybrominated diphenyl ethers (PBDE) in the cerebral cortex of river otters (Lontra canadensis) trapped from Ontario and Nova Scotia between 2002 and 2004. The mean concentration of total PCBs was 70.9 {+-} 12.1 ng/g l.w., and congeners 153, 180 and 138 accounted for nearly 60% of the sum. The mean concentration of total OCPs was 21.2 {+-} 3.7 ng/g l.w., and hexachlorobenzene (32.6% of total) and DDE (28.1%) accounted for the majority. The mean concentration of total PBDEs was 3.2 {+-} 0.6 ng/g l.w., and congeners 99 (44.9%), 153 (30.5%), and 100 (24.7%) were measured at the indicated percentages. There was no relationship between these residue data and concentrations of brain mercury or neurochemical receptors and enzymes as determined in earlier studies on these same animals. - River otters accumulated PCBs, OCPs, and PBDEs, but at levels below thresholds for neurotoxic effects.

  15. Heterogenity of Echinococcus canadensis genotype 6 - the main causative agent of cystic echinococcosis in Birjand, Eastern Iran.

    Science.gov (United States)

    Karamian, Mehdi; Haghighi, Fatemeh; Hemmati, Mina; Taylor, Walter Robert; Salehabadi, Alireza; Ghatee, Mohammad Amin

    2017-10-15

    Little is known about the genotypes of Echinococcus spp. and their life cycles in eastern Iran. We analysed the partial sequences of the nad1 and cox1 genes from 17 isolates from hydatid cyst-infected patients (n=9), camels (n=5) and sheep (n=3) in Birjand, eastern Iran. A new primer pair was also used to amplify the long fragment (1180bp) of the cox1 gene. All camel and eight human isolates were G6 strains of Echinococcus canadensis while one human isolate and the three sheep isolates were G1 genotypes (sheep strain) of E. granulosus sensu stricto (s.s.). Nad1 and cox1 sequence analyses showed high G6 genetic homogeneity, similar to previously reported G6 strains from southeast and central Iran, Sudan and Mauritania. Low nucleotide and haplotype diversity similar to G6 strains from Russia (Altai republic) and Kazakhstan was also found, consistent with a bottleneck effect. In this study, G6 was the most common Echinococcus genotype. Genetic homogeneity of east, southeast and central Iranian G6 and its low genetic diversity may be due limited mobility and contact between humans and camels from other regions because of large, inhospitable deserts. Copyright © 2017 Elsevier B.V. All rights reserved.

  16. Bighorn sheep (Ovis canadensis) sinus tumors are associated with coinfections by potentially pathogenic bacteria in the upper respiratory tract.

    Science.gov (United States)

    Fox, Karen A; Rouse, Natalie M; Huyvaert, Kathryn P; Griffin, Karen A; Killion, Halcyon J; Jennings-Gaines, Jessica; Edwards, William H; Quackenbush, Sandra L; Miller, Michael W

    2015-01-01

    Bighorn sheep (Ovis canadensis) sinus tumors are hyperplastic to neoplastic, predominantly stromal masses of the paranasal sinuses that expand the sinus lining and obstruct the sinus cavities. Obstruction of the sinus cavities and disruption of normal sinus lining anatomy may interfere with clearance of bacterial pathogens from the upper respiratory tract. To examine this possibility, we explored whether the presence of sinus tumor features (tumor score) affected the likelihood of detecting potentially pathogenic bacteria from upper respiratory sinus lining tissues in bighorn sheep. We developed or used existing PCR assays for the detection of leukotoxigenic Pasteurellaceae and Mycoplasma ovipneumoniae in sinus lining tissues collected from 97 bighorn sheep in Colorado, US from 2009 to 2012. With the use of logistic regression analyses we found that tumor score was a good predictor of the probability of detecting potentially pathogenic bacteria in sinus lining tissues; we were more likely to detect potentially pathogenic bacteria from samples with high tumor scores. These findings add to our understanding of possible mechanisms for the maintenance and shedding of bacterial agents from the upper respiratory tracts of bighorn sheep.

  17. Accumulation and release of 99Tc by a macrophyte of the Yenisei River (Elodea canadensis) in laboratory experiments

    International Nuclear Information System (INIS)

    Bolsunovsky, A.; Bondareva, L.

    2008-01-01

    The study addresses 99 Tc accumulation and release by Elodea canadensis, one of the abundant species of submerged plants in the Yenisei River. 99 Tc in water samples of the 'Elodea - Yenisei River water' model system and in the biomass fractions was measured using a liquid scintillation analyzer. Experiments on accumulation of 99 Tc by Elodea showed that 99 Tc activity concentration can reach 120±6 Bq/g dry wt, with the concentration factor for 99 Tc 2700±500 l/kg dry wt. In experiments on 99 Tc release, over 504 hours about 82% of the total 99 Tc activity was released into the water from the plant; most of 99 Tc was released within the first 192 hours. The data obtained using sequential chemical fractionation of biomass confirmed the experimental data on 99 Tc release, which suggested that most of the biomass-bound 99 Tc was adsorbed on the surface of Elodea. 99 Tc tightly bound to biomass (fractions of organics and mineral residue) constituted just 17% of the total 99 Tc activity. (author)

  18. Post-disturbance plant community dynamics following a rare natural-origin fire in a Tsuga canadensis forest.

    Directory of Open Access Journals (Sweden)

    Bryan D Murray

    Full Text Available Opportunities to directly study infrequent forest disturbance events often lead to valuable information about vegetation dynamics. In mesic temperate forests of North America, stand-replacing crown fire occurs infrequently, with a return interval of 2000-3000 years. Rare chance events, however, may have profound impacts on the developmental trajectories of forest ecosystems. For example, it has been postulated that stand-replacing fire may have been an important factor in the establishment of eastern hemlock (Tsuga canadensis stands in the northern Great Lakes region. Nevertheless, experimental evidence linking hemlock regeneration to non-anthropogenic fire is limited. To clarify this potential relationship, we monitored vegetation dynamics following a rare lightning-origin crown fire in a Wisconsin hemlock-hardwood forest. We also studied vegetation in bulldozer-created fire breaks and adjacent undisturbed forest. Our results indicate that hemlock establishment was rare in the burned area but moderately common in the scarified bulldozer lines compared to the reference area. Early-successional, non-arboreal species including Rubus spp., Vaccinium angustifolium, sedges (Carex spp., grasses, Epilobium ciliatum, and Pteridium aquilinium were the most abundant post-fire species. Collectively, our results suggest that competing vegetation and moisture stress resulting from drought may reduce the efficacy of scarification treatments as well as the usefulness of fire for preparing a suitable seedbed for hemlock. The increasing prevalence of growing-season drought suggests that silvicultural strategies based on historic disturbance regimes may need to be reevaluated for mesic species.

  19. Costs and benefits of group living with disease: a case study of pneumonia in bighorn lambs (Ovis canadensis).

    Science.gov (United States)

    Manlove, Kezia R; Cassirer, E Frances; Cross, Paul C; Plowright, Raina K; Hudson, Peter J

    2014-12-22

    Group living facilitates pathogen transmission among social hosts, yet temporally stable host social organizations can actually limit transmission of some pathogens. When there are few between-subpopulation contacts for the duration of a disease event, transmission becomes localized to subpopulations. The number of per capita infectious contacts approaches the subpopulation size as pathogen infectiousness increases. Here, we illustrate that this is the case during epidemics of highly infectious pneumonia in bighorn lambs (Ovis canadensis). We classified individually marked bighorn ewes into disjoint seasonal subpopulations, and decomposed the variance in lamb survival to weaning into components associated with individual ewes, subpopulations, populations and years. During epidemics, lamb survival varied substantially more between ewe-subpopulations than across populations or years, suggesting localized pathogen transmission. This pattern of lamb survival was not observed during years when disease was absent. Additionally, group sizes in ewe-subpopulations were independent of population size, but the number of ewe-subpopulations increased with population size. Consequently, although one might reasonably assume that force of infection for this highly communicable disease scales with population size, in fact, host social behaviour modulates transmission such that disease is frequency-dependent within populations, and some groups remain protected during epidemic events. © 2014 The Author(s) Published by the Royal Society. All rights reserved.

  20. Investigation into the possibility of vertical transmission of avian bornavirus in free-ranging Canada geese (Branta canadensis).

    Science.gov (United States)

    Delnatte, Pauline; Nagy, Eva; Ojkic, Davor; Crawshaw, Graham; Smith, Dale A

    2014-01-01

    To investigate the possibility of in ovo infection with avian bornavirus (ABV) in wild Canada geese (Branta canadensis), 53 eggs were opportunistically collected at various stages of embryonic development from 16 free-ranging goose nests at a large urban zoo site where ABV infection is known to be present in this species. ABV RNA was detected in the yolk of one of three unembryonated eggs using real-time reverse transcription polymerase chain reaction. ABV RNA was not identified in the brains from 23 newly hatched goslings or 19 embryos, nor from three early whole embryos. Antibodies against ABV were not detected in the plasma of any of the hatched goslings using an enzyme-linked immunosorbent assay. Possible reasons for the failure to detect ABV RNA in hatchlings or embryos include low sample size, eggs deriving from parents not actively infected with ABV, the testing of only brain tissue, and failure of the virus to replicate in Canada goose embryos. In conclusion, this preliminary investigation demonstrating the presence of ABV RNA in the yolk of a Canada goose egg provides the first evidence for the potential for vertical transmission of ABV in waterfowl.

  1. Polychlorinated biphenyls, organochlorinated pesticides, and polybrominated diphenyl ethers in the cerebral cortex of wild river otters (Lontra canadensis)

    International Nuclear Information System (INIS)

    Basu, Niladri; Scheuhammer, Anton M.; O'Brien, Mike

    2007-01-01

    We measured the levels of ortho-substituted polychlorinated biphenyls (PCB), organochlorinated pesticides (OCP), and polybrominated diphenyl ethers (PBDE) in the cerebral cortex of river otters (Lontra canadensis) trapped from Ontario and Nova Scotia between 2002 and 2004. The mean concentration of total PCBs was 70.9 ± 12.1 ng/g l.w., and congeners 153, 180 and 138 accounted for nearly 60% of the sum. The mean concentration of total OCPs was 21.2 ± 3.7 ng/g l.w., and hexachlorobenzene (32.6% of total) and DDE (28.1%) accounted for the majority. The mean concentration of total PBDEs was 3.2 ± 0.6 ng/g l.w., and congeners 99 (44.9%), 153 (30.5%), and 100 (24.7%) were measured at the indicated percentages. There was no relationship between these residue data and concentrations of brain mercury or neurochemical receptors and enzymes as determined in earlier studies on these same animals. - River otters accumulated PCBs, OCPs, and PBDEs, but at levels below thresholds for neurotoxic effects

  2. Costs and benefits of group living with disease: a case study of pneumonia in bighorn lambs (Ovis canadensis)

    Science.gov (United States)

    Manlove, Kezia R.; Cassirer, E. Frances; Cross, Paul C.; Plowright, Raina K.; Hudson, Peter J.

    2014-01-01

    Group living facilitates pathogen transmission among social hosts, yet temporally stable host social organizations can actually limit transmission of some pathogens. When there are few between-subpopulation contacts for the duration of a disease event, transmission becomes localized to subpopulations. The number of per capita infectious contacts approaches the subpopulation size as pathogen infectiousness increases. Here, we illustrate that this is the case during epidemics of highly infectious pneumonia in bighorn lambs (Ovis canadensis). We classified individually marked bighorn ewes into disjoint seasonal subpopulations, and decomposed the variance in lamb survival to weaning into components associated with individual ewes, subpopulations, populations and years. During epidemics, lamb survival varied substantially more between ewe-subpopulations than across populations or years, suggesting localized pathogen transmission. This pattern of lamb survival was not observed during years when disease was absent. Additionally, group sizes in ewe-subpopulations were independent of population size, but the number of ewe-subpopulations increased with population size. Consequently, although one might reasonably assume that force of infection for this highly communicable disease scales with population size, in fact, host social behaviour modulates transmission such that disease is frequency-dependent within populations, and some groups remain protected during epidemic events.

  3. Herbicidas alternativos para controle de biótipos de Conyza bonariensis e C. canadensis resistentes ao glyphosate Alternative herbicides to control glyphosate-resistant biotypes of Conyza bonariensis and C. canadensis

    Directory of Open Access Journals (Sweden)

    M.S. Moreira

    2010-01-01

    Full Text Available Após sucessivos anos, aplicações do herbicida glyphosate em pomares de citros no Estado de São Paulo selecionaram biótipos resistentes de Conyza bonariensis e C. canadensis. Na ocorrência de plantas daninhas resistentes em uma área agrícola, tornam-se necessárias mudanças nas práticas de manejo para obtenção de adequado controle das populações resistentes, bem como para a redução da pressão de seleção sobre outras espécies. Assim, este trabalho foi realizado com o objetivo de identificar herbicidas alternativos para controle de biótipos de Conyza spp. resistentes ao herbicida glyphosate, com aplicações em diferentes estádios fenológicos da planta daninha. Três experimentos foram conduzidos em campo, em pomares de citros em formação, sobre plantas de buva em estádio fenológico de dez folhas e no pré-florescimento. Para plantas no estádio de dez folhas, controle satisfatório foi obtido com aplicações de glyphosate + bromacil + diuron (1.440 + 1.200 + 1.200 g ha-1, glyphosate + atrazina (1.440 + 1.500 g ha-1 e glyphosate + diuron (1.440 + 1.500 g ha-1. Quando em estádio de pré-florescimento de Conyza spp., a aplicação do herbicida amônio-glufosinato, na dose de 400 g ha-1, isolado ou associado a MSMA, bromacil+diuron, metsulfuron, carfentrazone e paraquat, foi a alternativa viável para controle dos biótipos resistentes ao glyphosate.After successive years, glyphosate applications on São Paulo-Brazil citrus orchards selected resistant biotypes of Conyza bonariensis and C. canadensis. The occurrence of herbicide-resistant weed biotypes at some agricultural area makes it necessary to change the management practices to reach effective control of the selected resistant populations, as well as to reduce selection pressure on the other species. Thus, this work aimed to identify the alternative herbicides to control glyphosate-resistant biotypes of Conyza spp., with applications at different weed phenological

  4. Effects of simulated root herbivory and fertilizer application on growth and biomass allocation in the clonal perennialSolidago canadensis.

    Science.gov (United States)

    Schmid, B; Miao, S L; Bazzaz, F A

    1990-08-01

    Compensatory growth in response to simulated belowground herbivory was studied in the old-field clonal perennialSolidago canadensis. We grew rootpruned plants and plants with intact root systems in soil with or without fertilizer. For individual current shoots (aerial shoot with rhizome and roots) and for whole clones the following predictions were tested: a) root removal is compensated by increased root growth, b) fertilizer application leads to increased allocation to aboveground plant organs and increased leaf turnover, c) effects of fertilizer application are reduced in rootpruned plants. When most roots (90%) were removed current shoots quickly restored equilibrium between above-and belowground parts by compensatory belowground growth whereas the whole clone responded with reduced aboveground growth. This suggests that parts of a clone which are shared by actively growing shoots act as a buffer that can be used as source of material for compensatory growth in response to herbivory. Current shoots increased aboveground mass and whole clones reduced belowground mass in response to fertilizer application, both leading to increased allocation to aboverground parts. Also with fertilizer application both root-pruned and not root-pruned plants increased leaf and shoot turnover. Unfertilized plants, whether rootpruned or not, showed practically no aboveground growth and very little leaf and shoot turnover. Effects of root removal were as severe or more severe under conditions of high as under conditions of low nutrients, suggesting that negative effects of belowground herbivory are not ameliorated by abundant nutrients. Root removal may negate some effects of fertilizer application on the growth of current shoots and whole clones.

  5. Harnessing cross-species alignment to discover SNPs and generate a draft genome sequence of a bighorn sheep (Ovis canadensis).

    Science.gov (United States)

    Miller, Joshua M; Moore, Stephen S; Stothard, Paul; Liao, Xiaoping; Coltman, David W

    2015-05-20

    Whole genome sequences (WGS) have proliferated as sequencing technology continues to improve and costs decline. While many WGS of model or domestic organisms have been produced, a growing number of non-model species are also being sequenced. In the absence of a reference, construction of a genome sequence necessitates de novo assembly which may be beyond the ability of many labs due to the large volumes of raw sequence data and extensive bioinformatics required. In contrast, the presence of a reference WGS allows for alignment which is more tractable than assembly. Recent work has highlighted that the reference need not come from the same species, potentially enabling a wide array of species WGS to be constructed using cross-species alignment. Here we report on the creation a draft WGS from a single bighorn sheep (Ovis canadensis) using alignment to the closely related domestic sheep (Ovis aries). Two sequencing libraries on SOLiD platforms yielded over 865 million reads, and combined alignment to the domestic sheep reference resulted in a nearly complete sequence (95% coverage of the reference) at an average of 12x read depth (104 SD). From this we discovered over 15 million variants and annotated them relative to the domestic sheep reference. We then conducted an enrichment analysis of those SNPs showing fixed differences between the reference and sequenced individual and found significant differences in a number of gene ontology (GO) terms, including those associated with reproduction, muscle properties, and bone deposition. Our results demonstrate that cross-species alignment enables the creation of novel WGS for non-model organisms. The bighorn sheep WGS will provide a resource for future resequencing studies or comparative genomics.

  6. Cost-benefit analysis for invasive species control: the case of greater Canada goose Branta canadensis in Flanders (northern Belgium

    Directory of Open Access Journals (Sweden)

    Nikolaas Reyns

    2018-01-01

    Full Text Available Background Sound decisions on control actions for established invasive alien species (IAS require information on ecological as well as socio-economic impact of the species and of its management. Cost-benefit analysis provides part of this information, yet has received relatively little attention in the scientific literature on IAS. Methods We apply a bio-economic model in a cost-benefit analysis framework to greater Canada goose Branta canadensis, an IAS with documented social, economic and ecological impacts in Flanders (northern Belgium. We compared a business as usual (BAU scenario which involved non-coordinated hunting and egg destruction with an enhanced scenario based on a continuation of these activities but supplemented with coordinated capture of moulting birds. To assess population growth under the BAU scenario we fitted a logistic growth model to the observed pre-moult capture population. Projected damage costs included water eutrophication and damage to cultivated grasslands and were calculated for all scenarios. Management costs of the moult captures were based on a representative average of the actual cost of planning and executing moult captures. Results Comparing the scenarios with different capture rates, different costs for eutrophication and various discount rates, showed avoided damage costs were in the range of 21.15 M€ to 45.82 M€ under the moult capture scenario. The lowest value for the avoided costs applied to the scenario where we lowered the capture rate by 10%. The highest value occurred in the scenario where we lowered the real discount rate from 4% to 2.5%. Discussion The reduction in damage costs always outweighed the additional management costs of moult captures. Therefore, additional coordinated moult captures could be applied to limit the negative economic impact of greater Canada goose at a regional scale. We further discuss the strengths and weaknesses of our approach and its potential application to other

  7. Mannheimia haemolytica serotype A1 exhibits differential pathogenicity in two related species, Ovis canadensis and Ovis aries.

    Science.gov (United States)

    Dassanayake, Rohana P; Shanthalingam, Sudarvili; Herndon, Caroline N; Lawrence, Paulraj K; Frances Cassirer, E; Potter, Kathleen A; Foreyt, William J; Clinkenbeard, Kenneth D; Srikumaran, Subramaniam

    2009-02-02

    Mannheimia haemolytica causes pneumonia in both bighorn sheep (BHS, Ovis canadensis) and domestic sheep (DS, Ovis aries). Under experimental conditions, co-pasturing of BHS and DS results in fatal pneumonia in BHS. It is conceivable that certain serotypes of M. haemolytica carried by DS are non-pathogenic to them, but lethal for BHS. M. haemolytica serotypes A1 and A2 are carried by DS in the nasopharynx. However, it is the serotype A2 that predominantly causes pneumonia in DS. The objectives of this study were to determine whether serotype A1 exhibits differential pathogenicity to BHS and DS, and to determine whether leukotoxin (Lkt) secreted by this organism is its primary virulence factor. Three groups each of BHS and DS were intra-tracheally administered either 1 x 10(9)cfu of serotype A1 wild-type (lktA-Wt group), Lkt-deletion mutant of serotype A1-(lktA-Mt group), or saline (control group), respectively. In the lktA-Wt groups, all four BHS died within 48h while none of the DS died during the 2-week study period. In the lktA-Mt groups, none of the BHS or DS died. In the control groups, one DS died due to an unrelated cause. Necropsy and histopathological findings revealed that death of BHS in the lktA-Wt group was due to bilateral, fibrinohemorrhagic pneumonia. Although the A1-Mt-inoculated BHS were clinically normal, on necropsy, lungs of two BHS showed varying degrees of mild chronic pneumonia. These results indicate that M. haemolytica serotype A1 is non-pathogenic to DS, but highly lethal to BHS, and that Lkt is the primary virulence factor of M. haemolytica.

  8. A cytochemical and immunocytochemical analysis of the wall labyrinth apparatus in leaf transfer cells in Elodea canadensis.

    Science.gov (United States)

    Ligrone, Roberto; Vaughn, Kevin C; Rascio, Nicoletta

    2011-04-01

    Transfer cells are plant cells specialized in apoplast/symplast transport and characterized by a distinctive wall labyrinth apparatus. The molecular architecture and biochemistry of the labyrinth apparatus are poorly known. The leaf lamina in the aquatic angiosperm Elodea canadensis consists of only two cell layers, with the abaxial cells developing as transfer cells. The present study investigated biochemical properties of wall ingrowths and associated plasmalemma in these cells. Leaves of Elodea were examined by light and electron microscopy and ATPase activity was localized cytochemically. Immunogold electron microscopy was employed to localize carbohydrate epitopes associated with major cell wall polysaccharides and glycoproteins. The plasmalemma associated with the wall labyrinth is strongly enriched in light-dependent ATPase activity. The wall ingrowths and an underlying wall layer share an LM11 epitope probably associated with glucuronoarabinoxylan and a CCRC-M7 epitope typically associated with rhamnogalacturonan I. No labelling was observed with LM10, an antibody that recognizes low-substituted and unsubstituted xylan, a polysaccharide consistently associated with secondary cell walls. The JIM5 and JIM7 epitopes, associated with homogalacturonan with different degrees of methylation, appear to be absent in the wall labyrinth but present in the rest of cell walls. The wall labyrinth apparatus of leaf transfer cells in Elodea is a specialized structure with distinctive biochemical properties. The high level of light-dependent ATPase activity in the plasmalemma lining the wall labyrinth is consistent with a formerly suggested role of leaf transfer cells in enhancing inorganic carbon inflow. The wall labyrinth is a part of the primary cell wall. The discovery that the wall ingrowths in Elodea have an antibody-binding pattern divergent, in part, from that of the rest of cell wall suggests that their carbohydrate composition is modulated in relation to transfer

  9. Influence of light intensity on the toxicity of atrazine to the submerged freshwater aquatic macrophyte Elodea canadensis.

    Science.gov (United States)

    Brain, Richard A; Hoberg, James; Hosmer, Alan J; Wall, Steven B

    2012-05-01

    Light intensity can have a profound influence on the degree of phytotoxicity experienced by plants exposed to photosystem II (PSII) inhibiting herbicides. This relationship was evaluated in the submerged aquatic macrophyte Elodea canadensis exposed to three different concentrations of atrazine (510, 1000 and 2000 μg a.i./L) plus an untreated control at three different light intensities (0, 500 and 6000 lx) under static-renewal conditions for 14 days. Under 500 lx light intensity, control plants demonstrated a rapid increase in shoot length but minimal increase in dry shoot weight, suggesting limited photosynthesis. Based on shoot-length and biomass, growth was not affected by any atrazine exposure relative to controls under dark conditions (0 lx). Under low-light conditions at 500 lx, exposures to 510, 1000 and 2000 μg a.i./L atrazine significantly decreased net shoot lengths by 34%, 38% and 35%, respectively, relative to corresponding (500 lx) controls. However, atrazine exposure under this light condition did not significantly decrease biomass (dry shoot weight). Compared to 6000 lx, only approximately 8% of photosynthetically active radiation (PAR) was measured under 500 lx intensity, indicating that minimal PAR was available for photosynthesis. Under optimal light conditions (6000 lx), net shoot lengths significantly decreased in the treated atrazine groups by 48%, 51% and 68%, and net dry shoot weights (biomass) were significantly decreased by 79%, 81% and 91%, respectively, relative to corresponding (6000 lx) controls. These data show that under low light conditions, atrazine-induced effects on dry shoot weight (biomass) are dependent on available PAR and active photosynthesis. Copyright © 2011 Elsevier Inc. All rights reserved.

  10. Effect of vaccination against pneumonia on the survival of bighorn sheep (Ovis canadensis) commingled with carrier animals.

    Science.gov (United States)

    Raghavan, Bindu; Bavananthasivam, Jegarubee; Kugadas, Abirami; Haldorson, Gary J; Srikumaran, Subramaniam

    2017-05-01

    Leukotoxin producing (lkt+) members of Pasteurellaceae, particularly Mannheimia haemolytica and Bibersteinia trehalosi are important pathogens of pneumonia in bighorn sheep (BHS; Ovis canadensis), causing fatal disease. Predisposing or concurrent infection with Mycoplasma ovipneumoniae enhances the severity of the disease, resulting in increased morbidity and mortality. Several studies have investigated the effectiveness of vaccines against lkt+ members of Pasteurellaceae in preventing fatal pneumonia in BHS. In all of these studies, however, vaccinated animals were challenged experimentally, by direct inoculation of the pathogens, rather than by natural challenge. Moreover, none has investigated the efficacy of the vaccines under conditions of concurrent infection with M. ovipneumoniae. We immunized three bighorn rams and one pregnant ewe with an experimental multivalent vaccine along with a commercial vaccine. The immunized animals were then commingled with two bighorn ewes known to be carriers of lkt+ members of Pasteurellaceae, to simulate natural infection or disease transmission. All vaccinated animals remained healthy. We then inoculated the two carrier ewes with nasal washings from domestic sheep containing M. ovipneumoniae. Within a week, all animals developed mild to moderate signs of pneumonia. While the rams died within two-three months post-inoculation (p.i.), the vaccinated ewe and her lamb died five and eight months p.i., respectively. Taken together, these results suggest that vaccination of BHS against lkt+ members of Pasteurellaceae alone can protect them from natural challenge by these pathogens. However, it may not be adequate to protect them against pneumonia compounded by concurrent infection with M. ovipneumoniae. Copyright © 2017 Elsevier B.V. All rights reserved.

  11. Cost-benefit analysis for invasive species control: the case of greater Canada goose Branta canadensis in Flanders (northern Belgium)

    Science.gov (United States)

    Casaer, Jim; De Smet, Lieven; Devos, Koen; Huysentruyt, Frank; Robertson, Peter A.; Verbeke, Tom

    2018-01-01

    Background Sound decisions on control actions for established invasive alien species (IAS) require information on ecological as well as socio-economic impact of the species and of its management. Cost-benefit analysis provides part of this information, yet has received relatively little attention in the scientific literature on IAS. Methods We apply a bio-economic model in a cost-benefit analysis framework to greater Canada goose Branta canadensis, an IAS with documented social, economic and ecological impacts in Flanders (northern Belgium). We compared a business as usual (BAU) scenario which involved non-coordinated hunting and egg destruction with an enhanced scenario based on a continuation of these activities but supplemented with coordinated capture of moulting birds. To assess population growth under the BAU scenario we fitted a logistic growth model to the observed pre-moult capture population. Projected damage costs included water eutrophication and damage to cultivated grasslands and were calculated for all scenarios. Management costs of the moult captures were based on a representative average of the actual cost of planning and executing moult captures. Results Comparing the scenarios with different capture rates, different costs for eutrophication and various discount rates, showed avoided damage costs were in the range of 21.15 M€ to 45.82 M€ under the moult capture scenario. The lowest value for the avoided costs applied to the scenario where we lowered the capture rate by 10%. The highest value occurred in the scenario where we lowered the real discount rate from 4% to 2.5%. Discussion The reduction in damage costs always outweighed the additional management costs of moult captures. Therefore, additional coordinated moult captures could be applied to limit the negative economic impact of greater Canada goose at a regional scale. We further discuss the strengths and weaknesses of our approach and its potential application to other IAS. PMID

  12. Design to monitor trend in abundance and presence of American beaver (Castor canadensis) at the national forest scale.

    Science.gov (United States)

    Beck, Jeffrey L; Dauwalter, Daniel C; Gerow, Kenneth G; Hayward, Gregory D

    2010-05-01

    Wildlife conservationists design monitoring programs to assess population dynamics, project future population states, and evaluate the impacts of management actions on populations. Because agency mandates and conservation laws call for monitoring data to elicit management responses, it is imperative to design programs that match the administrative scale for which management decisions are made. We describe a program to monitor population trends in American beaver (Castor canadensis) on the US Department of Agriculture, Black Hills National Forest (BHNF) in southwestern South Dakota and northeastern Wyoming, USA. Beaver have been designated as a management indicator species on the BHNF because of their association with riparian and aquatic habitats and its status as a keystone species. We designed our program to monitor the density of beaver food caches (abundance) within sampling units with beaver and the proportion of sampling units with beavers present at the scale of a national forest. We designated watersheds as sampling units in a stratified random sampling design that we developed based on habitat modeling results. Habitat modeling indicated that the most suitable beaver habitat was near perennial water, near aspen (Populus tremuloides) and willow (Salix spp.), and in low gradient streams at lower elevations. Results from the initial monitoring period in October 2007 allowed us to assess costs and logistical considerations, validate our habitat model, and conduct power analyses to assess whether our sampling design could detect the level of declines in beaver stated in the monitoring objectives. Beaver food caches were located in 20 of 52 sampled watersheds. Monitoring 20 to 25 watersheds with beaver should provide sufficient power to detect 15-40% declines in the beaver food cache index as well as a twofold decline in the odds of beaver being present in watersheds. Indices of abundance, such as the beaver food cache index, provide a practical measure of

  13. Alternativas de propagação na produção de óleo essencial de Mentha canadensis L. no Litoral Norte Catarinense

    OpenAIRE

    Santos,V.M.C.S.; Schneider,T.R.; Bizzo,H.R.; Deschamps,C.

    2012-01-01

    O gênero Mentha é cultivado mundialmente para a produção de óleo essencial, com ênfase no constituinte mentol, amplamente utilizado nas indústrias farmacêutica, cosmética, alimentícia e de higiene pessoal. Este trabalho teve como objetivo avaliar o efeito da utilização de diferentes estruturas de propagação e épocas de colheita de Mentha canadensis L. no Litoral Norte Catarinense. O delineamento experimental foi em blocos ao acaso em esquema fatorial 4x2, comparando quatro estruturas de propa...

  14. Short-term effects of benzalkonium chloride and atrazine on Elodea canadensis using a miniaturised microbioreactor system for an online monitoring of physiologic parameters.

    Science.gov (United States)

    Vervliet-Scheebaum, Marco; Ritzenthaler, Raphael; Normann, Johannes; Wagner, Edgar

    2008-02-01

    The study evaluated the effects of benzalkonium chloride (BAC) and atrazine on the macrophyte Elodea canadensis (Michaux) using a miniaturised monitoring test system consisting of a microbioreactor of reduced volume and integrated sensors for the online measurement of physiologic parameters, like oxygen production and different parameters of fluorescence. Different concentrations of both chemicals were applied to leaves of E. canadensis and the physiologic endpoints evaluated after 1h. A concentration-dependent reduction of the oxygen production and of the effective quantum yield of energy conversion was recorded. The mini-PAM technique implemented in the presented system allowed for a clear monitoring of the kinetic of BAC and atrazine, showing their distinct mode of action. No observable adverse effects were recorded up to concentrations of 2.5 mg/L and 10 microg/L, for BAC and atrazine, respectively. These values are in accordance with available results in the literature, hence indicating that the microbioreactor test system might be suitable, on the one hand, for the laboratory screening of potential short-term toxicity of contaminants on aquatic plants, and on the other hand, serve as an in situ field biomonitoring system for the rapid detection of pollutants in water.

  15. Pigs and wild boar in Corsica harbor Echinococcus canadensis G6/7 at levels of concern for public health and local economy.

    Science.gov (United States)

    Umhang, Gérald; Richomme, Céline; Hormaz, Vanessa; Boucher, Jean-Marc; Boué, Franck

    2014-05-01

    Cystic echinococcosis (CE) is a parasitic zoonosis widespread in the Mediterranean area. The parasite is commonly maintained in a domestic cycle involving dogs and livestock species. As no new data have been made available for the last 15 years concerning the French Mediterranean island of Corsica, a cross-sectional survey at the slaughterhouse was conducted in 2009-2010 to describe the current presence of Echinococcus granulosus sensu lato in intermediate hosts. Only pig infections with the G6/7 genotype of Echinococcus canadensis were observed. No infection was detected in other breeding species but this should be interpreted with caution because 75% of the cows inspected during the survey were calves, and all sheep and goats were younger than two months old. In parallel four wild boars harvested during the 2010-2011 hunting season were also infected by the same genotype. These data constitute the first report of E. canadensis in France and the first molecular characterization of E. granulosus sensu lato in a wild species in France. The current prevalence observed in pigs (5.9%, n=2527) highlights the fact that CE is still of economic concern on Corsica, an island where certain regional products are produced using pig's liver ("Figatelli"). This prevalence, and the similar one observed in wild boars (4.0%, n=101), is a consequence of certain breeding practices and hunting practices which enable circulation of the parasite in the environment in close contact with humans. Copyright © 2014 Elsevier B.V. All rights reserved.

  16. Mercury concentrations in wild mink (Mustela vison) and river otters (Lontra canadensis) collected from eastern and Atlantic Canada: Relationship to age and parasitism

    Energy Technology Data Exchange (ETDEWEB)

    Klenavic, Katherine [Environmental and Resource Studies, Trent University, 1600 West Bank Drive, Peterborough, ON K9J 7B8 (Canada); Champoux, Louise [Service Canadien de la Faune Environnement Canada, 1141 Route de l' Eglise, c.p. 10100, Sainte-Foy, QC G1V 4H5 (Canada)], E-mail: louise.champoux@ec.gc.ca; Mike, O' Brien [Furbearers and Upland Game, Department of Natural Resources, Kentville, NS B4N 4E5 (Canada)], E-mail: obrienms@gov.ns.ca; Daoust, Pierre-Y. [Department of Pathology and Microbiology, Atlantic Veterinary College, University of P.E.I., 550 University Avenue, Charlottetown, PEI C1A 4P3 (Canada)], E-mail: daoust@upei.ca; Evans, R. Douglas [Environmental and Resource Studies, Trent University, 1600 West Bank Drive, Peterborough, ON K9J 7B8 (Canada); Evans, Hayla E. [Environmental and Resource Studies, Trent University, 1600 West Bank Drive, Peterborough, ON K9J 7B8 (Canada)], E-mail: hevans@trentu.ca

    2008-11-15

    Total mercury (Hg) concentrations were measured in the fur, brain and liver of wild mink (Mustela vison) and river otters (Lontra canadensis) collected from eastern and Atlantic Canada. Total Hg concentrations in fur were strongly correlated with levels in the brain and liver. There was no difference in tissue concentrations between male and female mink; however, female otters had significantly higher fur, brain and liver Hg levels than males. Similarly, there was not a significant relationship between Hg concentration and age of mink, whereas in otters, Hg concentrations in all three tissues decreased significantly with age. In both species, only a very small percentage of the variability in Hg concentration was explained by age. After adjusting the data for site-to-site differences in Hg levels, Hg concentrations in the fur of mink infected by the parasite, Dioctophyma renale, were found to be significantly higher than Hg levels in uninfected mink. - Mercury (Hg) concentrations in liver, brain and fur are correlated in mink (Mustela vison) and otters (Lontra canadensis), allowing the use of fur as an indicator of internal tissue concentrations.

  17. First molecular evidence of the simultaneous human infection with two species of Echinococcus granulosus sensu lato: Echinococcus granulosus sensu stricto and Echinococcus canadensis.

    Science.gov (United States)

    Oudni-M'rad, Myriam; M'rad, Selim; Ksia, Amine; Lamiri, Rachida; Mekki, Mongi; Nouri, Abdellatif; Mezhoud, Habib; Babba, Hamouda

    2016-03-01

    Cystic echinococcosis is a widespread zoonotic parasitic disease especially in Tunisia which is one of the most endemic countries in the Mediterranean area. The etiological agent, Echinococcus granulosus sensu lato, implies dogs and other canids as definitive hosts and different herbivore species as intermediate hosts. Human contamination occurs during the consumption of parasite eggs passed in the environment through canid feces. Hydatid cysts coming from a child operated for multiple echinococcosis were collected and analyzed in order to genotype and to obtain some epidemiological molecular information. Three targets, ribosomal DNA ITS1 fragment, NADH dehydrogenase subunit 1 (nad1), and mitochondrial cytochrome c oxydase subunit 1 (CO1) genes, were amplified and analyzed by RFLP and sequencing approach. This study presents the first worldwide report in human of a simultaneous infection with Echinococcus granulosus sensu stricto (genotype G1) and Echinococcus canadensis (genotype G6) species. This is also the first report of the presence of E. canadensis in the Tunisian population which argues in favor of a greater importance of this species in human infestation in Tunisia than previously believed.

  18. Mercury concentrations in wild mink (Mustela vison) and river otters (Lontra canadensis) collected from eastern and Atlantic Canada: Relationship to age and parasitism

    International Nuclear Information System (INIS)

    Klenavic, Katherine; Champoux, Louise; Mike, O'Brien; Daoust, Pierre-Y.; Evans, R. Douglas; Evans, Hayla E.

    2008-01-01

    Total mercury (Hg) concentrations were measured in the fur, brain and liver of wild mink (Mustela vison) and river otters (Lontra canadensis) collected from eastern and Atlantic Canada. Total Hg concentrations in fur were strongly correlated with levels in the brain and liver. There was no difference in tissue concentrations between male and female mink; however, female otters had significantly higher fur, brain and liver Hg levels than males. Similarly, there was not a significant relationship between Hg concentration and age of mink, whereas in otters, Hg concentrations in all three tissues decreased significantly with age. In both species, only a very small percentage of the variability in Hg concentration was explained by age. After adjusting the data for site-to-site differences in Hg levels, Hg concentrations in the fur of mink infected by the parasite, Dioctophyma renale, were found to be significantly higher than Hg levels in uninfected mink. - Mercury (Hg) concentrations in liver, brain and fur are correlated in mink (Mustela vison) and otters (Lontra canadensis), allowing the use of fur as an indicator of internal tissue concentrations

  19. Correlations between the anatomical traits of Gymnocladus canadensis Lam. in heartwood and sapwood of early- and latewood zones of growth rings

    Directory of Open Access Journals (Sweden)

    Jokanović Dušan

    2015-01-01

    Full Text Available This paper shows correlations between vessel characteristics and differences in growth-ring width in heartwood and sapwood. Analyzed samples were from an iron-wood tree (Gymnocladus canadensis Lam. that grew in the Mužljanski Rit area, of the Srpska Crnja municipality in Serbia. According to previous research, it was deduced that Gymnocladus canadensis Lam. belongs to ring-porous species with big vessel lumen in the earlywood zone and thicker cell walls in the latewood. Vessels were more numerous in the latewood zone, and the same was true for heartwood and sapwood. For both layers, sapwood possessed a few more vessels than heartwood, and a statistically significant difference was confirmed by t-test during the early phase. The greatest negative value of correlation coefficient was between the number of vessels and growth-ring width during the early phase for sapwood. The number of vessels decreased in the wider growth rings. The correlation between growth-ring width and the area of vessels had a statistically significant positive value of correlative coefficient, which means that wider growth rings had larger vessel areas in the early phase for sapwood. [Projekat Ministarstva nauke Republike Srbije, br. 31041

  20. A study of gizzard nematodes and renal coccidiosis in Canada geese (Branta canadensis interior) of the Mississippi Valley population

    Science.gov (United States)

    Tuggle, Benjamin N.

    1982-01-01

    A total of 309 Mississippi Valley Population Canada geese, Branta canadensis interior, of different sex and age groups was collected from three locations in the Mississippi Flyway from 1979-1981 and examined for gizzard nematodes and renal coccidia. Three species of nematodes were removed from the gizzards, Amidostomum anseris, A. spatulatum, and Epomidiostomum crami. The latter two species are reported from this population of geese for the first time. Gizzard nematodes were found in 95.2% of all Canada geese examined, with A. anseris being the most abundant of the three species. There was no statistically significant difference between immatures and adults in the abundance of total nematodes species however, immature geese carried significantly more A. anseris and adult geese harbored significantly more A. spatulatum and E. crami infections. No significant difference in gizzard worm infections between male and female birds was observed. The abundance of overall gizzard nematodes was greatest in Canada geese from Winisk, Ontario (11.9), but the abundance of worms in southern Illinois geese (10.0) was similar. Geese from Horicon National Wildlife Refuge had the lowest abundance of infection, 7.5. The overall abundance of nematodes showed a general increase the second year of the study in each sex and age group and at each collection area. Each of three species of nematodes was responsible for some degree of damage to the gizzard lining and koilin, but E. crami was the most pathogenic of the species recovered. The occurrence of renal coccidiosis in Canada geese of this flyway is reported for the first time; the etiologic agent is Eimeria clarkei. The oocysts and/or endogenous stages of E. clarkei were present in 6.8% of the Canada geese sampled and this was the only species found. Male and female geese showed no significant differences in E. clarkei infections, however, significantly more immature geese than adult geese were infected with this species. A cell

  1. Passive transfer in domestic and bighorn lambs Total IgG in ewe sera and colostrum and serum IgG kinetics in lambs following colostrum ingestion are similar in domestic sheep and bighorn sheep (ovis aries and ovis canadensis)

    Science.gov (United States)

    Pneumonia is a population-limiting disease of bighorn sheep (BHS; Ovis canadensis) and a recognized disease entity in domestic sheep (DS; Ovis aries) worldwide. Respiratory disease in BHS lambs can persist for years after all-age outbreaks, resulting in suppressed lamb recruitment. It has been sugge...

  2. FF-EMU: a radiation tolerant ASIC for the distribution of timing, trigger and control signals in the CMS End-Cap Muon detector

    International Nuclear Information System (INIS)

    Campagnari, C; Costantino, N; Magazzù, G; Tongiani, Claudio

    2012-01-01

    A radiation tolerant integrated circuit for the distribution of clock, trigger and control signals in the Front-End electronics of the CMS End-Cap Muon detector has been developed in the IBM CMOS 130nm technology. The circuit houses transmitter and receiver interfaces to serial links implementing the FF-LYNX protocol that allows the integrated transmission of triggers and data frames with different latency constraints. Encoder and decoder modules associate signal transitions to FF-LYNX frames. The system and the ASIC architecture and behavior and the results of test and characterization of the ASIC prototypes will be presented.

  3. Top predators, mesopredators and their prey: interference ecosystems along bioclimatic productivity gradients.

    Science.gov (United States)

    Elmhagen, B; Ludwig, G; Rushton, S P; Helle, P; Lindén, H

    2010-07-01

    1. The Mesopredator Release Hypothesis (MRH) suggests that top predator suppression of mesopredators is a key ecosystem function with cascading impacts on herbivore prey, but it remains to be shown that this top-down cascade impacts the large-scale structure of ecosystems. 2. The Exploitation Ecosystems Hypothesis (EEH) predicts that regional ecosystem structures are determined by top-down exploitation and bottom-up productivity. In contrast to MRH, EEH assumes that interference among predators has a negligible impact on the structure of ecosystems with three trophic levels. 3. We use the recolonization of a top predator in a three-level boreal ecosystem as a natural experiment to test if large-scale biomass distributions and population trends support MRH. Inspired by EEH, we also test if top-down interference and bottom-up productivity impact regional ecosystem structures. 4. We use data from the Finnish Wildlife Triangle Scheme which has monitored top predator (lynx, Lynx lynx), mesopredator (red fox, Vulpes vulpes) and prey (mountain hare, Lepus timidus) abundance for 17 years in a 200 000 km(2) study area which covers a distinct productivity gradient. 5. Fox biomass was lower than expected from productivity where lynx biomass was high, whilst hare biomass was lower than expected from productivity where fox biomass was high. Hence, where interference controlled fox abundance, lynx had an indirect positive impact on hare abundance as predicted by MRH. The rates of change indicated that lynx expansion gradually suppressed fox biomass. 6. Lynx status caused shifts between ecosystem structures. In the 'interference ecosystem', lynx and hare biomass increased with productivity whilst fox biomass did not. In the 'mesopredator release ecosystem', fox biomass increased with productivity but hare biomass did not. Thus, biomass controlled top-down did not respond to changes in productivity. This fulfils a critical prediction of EEH. 7. We conclude that the cascade

  4. Mammal (Mammalia Fauna of Kapıdağ Peninsula

    Directory of Open Access Journals (Sweden)

    Erdem HIZAL

    2008-01-01

    Full Text Available The number of studies on mammals of Kapıdag Peninsula is insufficent. The present study is based on mammal species collected and observed in Kapıdag Peninsula. Kapıdag Peninsula was visited as a total of 226 days between 2001-2007. Field collections yielded 32 mammal species from 6 orders: Insectivora (5, Chiroptera (9,Lagomorpha (1, Rodentia (7, Carnivora (7, Artiodactyla (3. Of the species recorded in this study are rare for Kapıdag Peninsula: Lynx lynx and Felis silvestris.

  5. The invasion and expansion of three North American species of goldenrod (Solidago canadensis L. sensu lato. S. gigantea Ait. and S. graminifolia (L Salisb in Poland

    Directory of Open Access Journals (Sweden)

    Małgorzata Guzikowa

    2014-01-01

    Full Text Available The geographical distributions of three adventive species of North American goldenrods (S. canadensis L. s.l., S. gigantea Ait. and S. graminifolin (L. Salisb. throughout Poland are presented. The history of escape, initial establishent and subsequent spread are documented on the basis of almost 1400 herbarium collections and site records of the authors. Of the three species S. gigantea is the most aggressive S. cunadensis has continued to spread vigorously. but S. graminifolia has barely moved beyond its initial area of establishment. The first two species occur essentially throughout Poland. having expanded from centers in southwestern Poland in the decade between 1840 to 1850. Both of these plants are spreading rapidly and producing vigorous populations which thrive in disturbed and semi-disturbed environments and S. gigantea seems to have now attained the capability of invading stabilized habitats and communities. They are in the process of becoming a serious threat to many natural environments and ecosystems in Poland.

  6. Solidago canadensis L. Essential Oil Vapor Effectively Inhibits Botrytis cinerea Growth and Preserves Postharvest Quality of Strawberry as a Food Model System.

    Science.gov (United States)

    Liu, Shumin; Shao, Xingfeng; Wei, Yanzhen; Li, Yonghua; Xu, Feng; Wang, Hongfei

    2016-01-01

    This study investigated the anti-fungal properties of Solidago canadensis L. essential oil (SCLEO) against Botrytis cinerea in vitro, and its ability to control gray mold and maintain quality in strawberry fruits. SCLEO exhibited dose-dependent antifungal activity against B. cinerea and profoundly altered mycelial morphology, cellular ultrastructure, and membrane permeability as evaluated by scanning electron microscopy, transmission electron microscopy, and fluorescence microscopy. SCLEO vapor at 0.1 mL/L maintained higher sensory acceptance and reduced decay of fresh strawberry fruit, and also reduced gray mold in artificially inoculated fruit. SCLEO treatment did not, however, stimulate phenylalanin ammonia-lyase, polyphenol oxidase, or chitinase, enzymes related to disease resistance. This suggests that SCLEO reduces gray mold by direct inhibition of pathogen growth. SCLEO vapor may provide a new and effective strategy for controlling postharvest disease and maintaining quality in strawberries.

  7. Mercury concentrations in wild mink (Mustela vison) and river otters (Lontra canadensis) collected from eastern and Atlantic Canada: relationship to age and parasitism.

    Science.gov (United States)

    Klenavic, Katherine; Champoux, Louise; Mike, O'Brien; Daoust, Pierre-Y; Evans, R Douglas; Evans, Hayla E

    2008-11-01

    Total mercury (Hg) concentrations were measured in the fur, brain and liver of wild mink (Mustela vison) and river otters (Lontra canadensis) collected from eastern and Atlantic Canada. Total Hg concentrations in fur were strongly correlated with levels in the brain and liver. There was no difference in tissue concentrations between male and female mink; however, female otters had significantly higher fur, brain and liver Hg levels than males. Similarly, there was not a significant relationship between Hg concentration and age of mink, whereas in otters, Hg concentrations in all three tissues decreased significantly with age. In both species, only a very small percentage of the variability in Hg concentration was explained by age. After adjusting the data for site-to-site differences in Hg levels, Hg concentrations in the fur of mink infected by the parasite, Dioctophyma renale, were found to be significantly higher than Hg levels in uninfected mink.

  8. Vaccination of Elk (Cervus canadensis) with Brucella abortus Strain RB51 Overexpressing Superoxide Dismutase and Glycosyltransferase Genes Does Not Induce Adequate Protection against Experimental Brucella abortus Challenge.

    Science.gov (United States)

    Nol, Pauline; Olsen, Steven C; Rhyan, Jack C; Sriranganathan, Nammalwar; McCollum, Matthew P; Hennager, Steven G; Pavuk, Alana A; Sprino, Phillip J; Boyle, Stephen M; Berrier, Randall J; Salman, Mo D

    2016-01-01

    In recent years, elk (Cervus canadensis) have been implicated as the source of Brucella abortus infection for numerous cattle herds in the Greater Yellowstone Area. In the face of environmental and ecological changes on the landscape, the range of infected elk is expanding. Consequently, the development of effective disease management strategies for wild elk herds is of utmost importance, not only for the prevention of reintroduction of brucellosis to cattle, but also for the overall health of the Greater Yellowstone Area elk populations. In two studies, we evaluated the efficacy of B. abortus strain RB51 over-expressing superoxide dismutase and glycosyltransferase for protecting elk from infection and disease caused by B. abortus after experimental infection with a virulent B. abortus strain. Our data indicate that the recombinant vaccine does not protect elk against brucellosis. Further, work is needed for development of an effective brucellosis vaccine for use in elk.

  9. Shared Bacterial and Viral Respiratory Agents in Bighorn Sheep (Ovis canadensis, Domestic Sheep (Ovis aries, and Goats (Capra hircus in Montana

    Directory of Open Access Journals (Sweden)

    David S. Miller

    2011-01-01

    Full Text Available Transmission of infectious agents from livestock reservoirs has been hypothesized to cause respiratory disease outbreaks in bighorn sheep (Ovis canadensis, and land management policies intended to limit this transmission have proven controversial. This cross-sectional study compares the infectious agents present in multiple populations of bighorn sheep near to and distant from their interface with domestic sheep (O. aries and domestic goat (Capra hircus and provides critical baseline information needed for interpretations of cross-species transmission risks. Bighorn sheep and livestock shared exposure to Pasteurellaceae, viral, and endoparasite agents. In contrast, although the impact is uncertain, Mycoplasma sp. was isolated from livestock but not bighorn sheep. These results may be the result of historic cross-species transmission of agents that has resulted in a mosaic of endemic and exotic agents. Future work using longitudinal and multiple population comparisons is needed to rigorously establish the risk of outbreaks from cross-species transmission of infectious agents.

  10. Population size of Cuban Parrots Amazona leucocephala and Sandhill Cranes Grus canadensis and community involvement in their conservation in northern Isla de la Juventud, Cuba

    Science.gov (United States)

    Aguilera, X.G.; Alvarez, V.B.; Wiley, J.W.; Rosales, J.R.

    1999-01-01

    The Cuban Sandhill Crane Grus canadensis nesiotes and Cuban Parrot Amazona leucocephala palmarum are considered endangered species in Cuba and the Isla de la Juventud (formerly Isla de Pinos). Coincident with a public education campaign, a population survey for these species was conducted in the northern part of the Isla de la Juventud on 17 December 1995, from 06hoo to 10hoo. Residents from throughout the island participated, manning 98 stations, with 1-4 observers per station. Parrots were observed at 60 (61.2%) of the stations with a total of 1320, maximum (without correction for duplicate observations), and 1100, minimum (corrected), individuals counted. Sandhill cranes were sighted at 38 (38.8%) of the stations, with a total of 115 individuals. Cranes and parrots co-occurred at 20 (20.4%) of the stations.

  11. Solidago canadensis L essential oil vapor effectively inhibits Botrytis cinerea growth and preserves postharvest quality of strawberry as a food model system

    Directory of Open Access Journals (Sweden)

    Shumin Liu

    2016-08-01

    Full Text Available This study investigated the anti-fungal properties of Solidago canadensis L essential oil (SCLEO against Botrytis cinerea in vitro, and its ability to control gray mold and maintain quality in strawberry fruits. SCLEO exhibited dose-dependent antifungal activity against B. cinerea and profoundly altered mycelial morphology, cellular ultrastructure, and membrane permeability as evaluated by scanning electron microscopy, transmission electron microscopy, and fluorescence microscopy. SCLEO vapor at 0.1 mL/L maintained higher sensory acceptance and reduced decay of fresh strawberry fruit, and also reduced gray mold in artificially inoculated fruit. SCLEO treatment did not however, stimulate phenylalanin ammonia-lyase (PAL, polyphenol oxidase (POD, or chitinase (CHI, enzymes related to disease resistance. This suggests that SCLEO reduces gray mold by direct inhibition of pathogen growth. SCLEO vapor may provide a new and effective strategy for controlling postharvest disease and maintaining quality in strawberries.

  12. Contribution of the actomyosin motor to the temperature-dependent translational diffusion of water by cytoplasmic streaming in Elodea canadensis cells.

    Science.gov (United States)

    Vorob'ev, V N; Anisimov, A V; Dautova, N R

    2004-12-01

    The extent to which the actomyosin motor responsible for cytoplasmic streaming contributes to the translational diffusion of water in Elodea canadensis cells was studied by a nuclear magnetic resonance (NMR) spin-echo technique. The relative contribution of the actomyosin motor was determined from the corresponding apparent diffusion coefficient by the Einstein-Smolukhovsky relation. It is equal to the difference between the diffusional displacements of the cytoplasmic and the bulk water (deltaX). The NMR data show that the temperature dependence of deltaX is humpshaped, which is characteristic of enzyme reactions. At the same time, the apparent diffusion coefficient of cytoplasmic water increases with an increase in temperature. The most significant contribution of the actomyosin motor to deltaX is observed at temperatures below 20 degrees C. Within the temperature range of 20 to 33 degrees C, deltaX changes only slightly, and a further increase in temperature reduces deltaX to zero.

  13. Shared bacterial and viral respiratory agents in bighorn sheep (Ovis canadensis), domestic sheep (Ovis aries), and goats (Capra hircus) in Montana

    Science.gov (United States)

    Miller, David S.; Weiser, Glen C.; Aune, Keith; Roeder, Brent; Atkinson, Mark; Anderson, Neil; Roffe, Thomas J.; Keating, Kim A.; Chapman, Phillip L.; Kimberling, Cleon; Rhyan, Jack C.; Clarke, P. Ryan

    2011-01-01

    Transmission of infectious agents from livestock reservoirs has been hypothesized to cause respiratory disease outbreaks in bighorn sheep (Ovis canadensis), and land management policies intended to limit this transmission have proven controversial. This cross-sectional study compares the infectious agents present in multiple populations of bighorn sheep near to and distant from their interface with domestic sheep (O. aries) and domestic goat (Capra hircus) and provides critical baseline information needed for interpretations of cross-species transmission risks. Bighorn sheep and livestock shared exposure to Pasteurellaceae, viral, and endoparasite agents. In contrast, although the impact is uncertain, Mycoplasma sp. was isolated from livestock but not bighorn sheep. These results may be the result of historic cross-species transmission of agents that has resulted in a mosaic of endemic and exotic agents. Future work using longitudinal and multiple population comparisons is needed to rigorously establish the risk of outbreaks from cross-species transmission of infectious agents.

  14. Effects of reintroduced beaver (Castor canadensis) on riparian bird community structure along the upper San Pedro River, southeastern Arizona and northern Sonora, Mexico

    Science.gov (United States)

    Johnson, Glenn E.; van Riper, Charles

    2014-01-01

    Chapter 1.—We measured bird abundance and richness along the upper San Pedro River in 2005 and 2006, in order to document how beavers (Castor canadensis) may act as ecosystem engineers after their reintroduction to a desert riparian area in the Southwestern United States. In areas where beavers colonized, we found higher bird abundance and richness of bird groups, such as all breeding birds, insectivorous birds, and riparian specialists, and higher relative abundance of many individual species—including several avian species of conservation concern. Chapter 2.—We conducted bird surveys in riparian areas along the upper San Pedro River in southeastern Arizona (United States) and northern Sonora (Mexico) in order to describe factors influencing bird community dynamics and the distribution and abundance of species, particularly those of conservation concern. These surveys were also used to document the effects of the ecosystem-altering activities of a recently reintroduced beavers (Castor canadensis). Chapter 3.—We reviewed Southwestern Willow Flycatcher (Empidonax traillii extimus) nest records and investigated the potential for future breeding along the upper San Pedro River in southeastern Arizona, where in July 2005 we encountered the southernmost verifiable nest attempt for the species. Continued conservation and management of the area’s riparian vegetation and surface water has potential to contribute additional breeding sites for this endangered Willow Flycatcher subspecies. Given the nest record along the upper San Pedro River and the presence of high-density breeding sites to the north, the native cottonwood-willow forests of the upper San Pedro River could become increasingly important to E. t. extimus recovery, especially considering the anticipated effect of the tamarisk leaf beetle (Diorhabda carinulata) on riparian habitat north of the region.

  15. Echinococcus granulosus sensu stricto, Echinococcus canadensis (G7), and Echinococcus ortleppi in fertile hydatid cysts isolated from cattle in Southern Brazil.

    Science.gov (United States)

    Urach Monteiro, Danieli; de Azevedo, Maria Isabel; Weiblen, Carla; Correia Ribeiro, Tatiana; Emmanouilidis, Jéssica; Tonin, Alexandre Alberto; de Avila Botton, Sônia; de la Rue, Mário Luiz

    2016-12-01

    Echinococcosis is a cosmopolitan zoonotic infection that affects humans and animals. The aim of this study was to identify and characterize the fertile hydatid cysts from bovine viscera in order to verify different species and/or genotypes present in Southern Brazil. Firstly, cysts were collected from a slaughterhouse, which received animals from different regions of Rio Grande do Sul State (RS), considered an important area of occurrence of cystic echinococcosis. In total, 2396 cysts were analyzed by microscopy to verify the presence of protoscoleces. Protoscoleces were detected in 291 samples and were classified as fertile hydatid cysts. Total DNA was extracted from protoscoleces and amplified by polymerase chain reaction (PCR). Two hundred and fifty-one samples were identified by PCR and characterized as G5/G6/G7 genotypes, of which 40 belonged to Echinococcus granulosus sensu stricto (G1-G3). PCR was also performed, using G5-specific primers to identify 250 samples as Echinococcus ortleppi (G5). Only one sample was identified as Echinococcus canadensis (G7) by DNA sequencing using primers specific for the coxI gene. Phylogenetic analysis was also performed and identified three distinct groups E1 (G5), E2 (G7), and E3 (G1-G3), which were grouped according to similarity of their sequences. The study highlights the fact that E. granulosus sensu stricto, E. ortleppi, and E. canadensis (G7) were infecting cattle in RS, emphasizing the adaptation of different species of Echinococcus to this intermediate host. Copyright © 2016 Elsevier B.V. All rights reserved.

  16. Multi-species genetic connectivity in a terrestrial habitat network.

    Science.gov (United States)

    Marrotte, Robby R; Bowman, Jeff; Brown, Michael G C; Cordes, Chad; Morris, Kimberley Y; Prentice, Melanie B; Wilson, Paul J

    2017-01-01

    Habitat fragmentation reduces genetic connectivity for multiple species, yet conservation efforts tend to rely heavily on single-species connectivity estimates to inform land-use planning. Such conservation activities may benefit from multi-species connectivity estimates, which provide a simple and practical means to mitigate the effects of habitat fragmentation for a larger number of species. To test the validity of a multi-species connectivity model, we used neutral microsatellite genetic datasets of Canada lynx ( Lynx canadensis ), American marten ( Martes americana ), fisher ( Pekania pennanti ), and southern flying squirrel ( Glaucomys volans ) to evaluate multi-species genetic connectivity across Ontario, Canada. We used linear models to compare node-based estimates of genetic connectivity for each species to point-based estimates of landscape connectivity (current density) derived from circuit theory. To our knowledge, we are the first to evaluate current density as a measure of genetic connectivity. Our results depended on landscape context: habitat amount was more important than current density in explaining multi-species genetic connectivity in the northern part of our study area, where habitat was abundant and fragmentation was low. In the south however, where fragmentation was prevalent, genetic connectivity was correlated with current density. Contrary to our expectations however, locations with a high probability of movement as reflected by high current density were negatively associated with gene flow. Subsequent analyses of circuit theory outputs showed that high current density was also associated with high effective resistance, underscoring that the presence of pinch points is not necessarily indicative of gene flow. Overall, our study appears to provide support for the hypothesis that landscape pattern is important when habitat amount is low. We also conclude that while current density is proportional to the probability of movement per unit area

  17. Seasonal Effects of Habitat on Sources and Rates of Snowshoe Hare Predation in Alaskan Boreal Forests.

    Directory of Open Access Journals (Sweden)

    Dashiell Feierabend

    Full Text Available Survival and predation of snowshoe hares (Lepus americanus has been widely studied, yet there has been little quantification of the changes in vulnerability of hares to specific predators that may result from seasonal changes in vegetation and cover. We investigated survival and causes of mortalities of snowshoe hares during the late increase, peak, and decline of a population in interior Alaska. From June 2008 to May 2012, we radio-tagged 288 adult and older juvenile hares in early successional and black spruce (Picea mariana forests and, using known-fate methods in program MARK, evaluated 85 survival models that included variables for sex, age, and body condition of hares, as well as trapping site, month, season, year, snowfall, snow depth, and air temperature. We compared the models using Akaike's information criterion with correction for small sample size. Model results indicated that month, capture site, and body condition were the most important variables in explaining survival rates. Survival was highest in July, and more generally during summer, when alternative prey was available to predators of hares. Low survival rates coincided with molting periods, breeding activity in the spring, and the introduction of juveniles to the sample population in the fall. We identified predation as the cause of mortality in 86% of hare deaths. When the source of predation could be determined, hares were killed more often by goshawks (Accipiter gentilis than other predators in early successional forest (30%, and more often by lynx (Lynx canadensis than other predators in black spruce forest (31%. Great horned owls (Bubo virginianus and coyotes (Canis latrans represented smaller proportions of hare predation, and non-predatory causes were a minor source (3% of mortality. Because hares rely on vegetative cover for concealment from predators, we measured cover in predation sites and habitats that the hares occupied and concluded that habitat type had a

  18. Investigation of glyphosate resistance levels and target-site based resistance (TSR) mechanisms in Conyza canadensis (L.) from apple orchards around areas of Bohai seas and Loess Plateau in China.

    Science.gov (United States)

    Mei, Yu; Xu, Yufang; Wang, Shipeng; Qiu, Lihong; Zheng, Mingqi

    2018-04-01

    The resistance levels to glyphosate and target-site based resistance mechanisms in susceptible (S) and resistant (R) Conyza canadensis (L.) populations, which were collected from apple orchards around areas of Bohai seas and Loess Plateau in China, were investigated. Among forty C. canadensis populations, eighteen populations (45%) were still susceptible; fourteen populations (35%) evolved low resistance levels resistance to glyphosate with resistance index (RI) of 2.02 to 3.90. In contrast, eight populations (20%) evolved medium resistance levels with RI of 4.35 to 8.38. The shikimic acid concentrations in R populations were highly negative relative with the glyphosate resistance levels in C. canadensis, the Pearson correlation coefficient was -0.82 treated by glyphosate at 1.8mg/L. Three 5-enoylpyruvylshikimate 3'-phosphate synthase genes (EPSPS1, EPSPS2 and EPSPS3) were cloned in all S and glyphosate-resistant C. canadensis populations. No amino acid substitution was identified at site of 102 and 106 in three EPSPS genes, which were reported to confer glyphosate resistance in other weed species. The relative expression level of EPSPS mRNA in R populations (SD07, LN05, SHX06 and SD09) was 4.5 to 13.2 times higher than in S biotype. The Pearson correlation coefficient between EPSPS expression levels and RI was 0.79, which indicated the over expression of EPSPS mRNA may cause these R populations evolve higher resistance level to glyphosate. Copyright © 2018 Elsevier Inc. All rights reserved.

  19. Photosynthetic Water Use Efficiency in it Sorghastrum nutans (C4) and it Solidago canadensis (C3) in Three Soils Along a CO2 Concentration Gradient

    Science.gov (United States)

    Fay, P. A.; Hui, D.; Procter, A.; Johnson, H. B.; Polley, H. W.; Jackson, R. B.

    2006-12-01

    The water use efficiency (WUE) of leaf photosynthetic carbon uptake is a key regulator of ecosystem carbon cycles and is strongly sensitive to atmospheric carbon dioxide concentrations [CO2]. However WUE responses to [CO2] typically differ between C3 and C4 species and may differ on varying soil types because of differences in soil moisture retention and plant uptake efficiency. We measured leaf-level photosynthesis (ACO2), stomatal conductance (gS), and transpiration (E) with an infrared gas analyzer to estimate WUE for the C4 grass Sorghastrum nutans and the C3 forb Solidago canadensis in constructed grassland species assemblages growing in three soils arrayed along a 200 560 ppm [CO2] gradient in the LYCOG Experiment, in central Texas, USA. LYCOG consists of eighty intact soil monoliths (1 m X 1 m X 1.5 m) representing 3 soil series, Austin (Udorthentic Haplustolls, a mollisol), Bastrop (Udic Paleustalfs, a sandy loam alfisol) and Houston Black (Udic Haplusterts, a vertisol). The monoliths were vegetated by transplanting 8 native perennial prairie species (5 grasses and 3 forbs), including S. nutans and S. canadensis. Both are abundant and widespread; S. nutans is a dominant species throughout much of North American tallgrass prairie, and S. canadensis is one of the most abundant and widespread forbs in North America. ACO2, gS, and E were measured three times during the growing season. Dark-adapted chlorophyll fluorescence (FvFm) was measured concurrently to assess photosynthetic capacity, and leaf water potential (Ψ leaf) and soil water content were measured to assess plant water status and soil moisture availability. WUE increased strongly (p< 0.0001) at higher [CO2], due to a combination of decreasing E due to decreased gS (p ≤ 0.0005) and increasing ACO2 (p = 0.0055). This pattern was the same in both species (species x [CO2] ns). There was a corresponding increase in Ψ leaf (p = 0.01) at higher [CO2], but no [CO2] effect on FvFm. E and gS were lower on

  20. Germinação das sementes de Conyza canadensis e Conyza bonariensis em função da disponibilidade hídrica no substrato Germination of Conyza canadensis and Conyza bonariensis seeds in function of water availability in the substrate

    Directory of Open Access Journals (Sweden)

    O.M. Yamashita

    2010-06-01

    Full Text Available Recentes relatos apresentam Conyza canadensis e C. bonariensis como importantes espécies daninhas do sistema agrícola. A grande adaptabilidade ecológica dessas espécies a sistemas conservacionistas de manejo de solo e o aumento da pressão de seleção, pelo intenso uso de herbicidas, podem contribuir para a seleção de biótipos resistentes. O conhecimento dos fatores que controlam a germinação das sementes pode gerar subsídios para estratégias de manejo dessas espécies. A disponibilidade de água afeta diretamente a germinabilidade de sementes. Assim, o presente trabalho teve como objetivo estudar o efeito da restrição hídrica no substrato e seu efeito na germinação das sementes de Conyza canadensis e C. bonariensis. Foram realizados três ensaios no Laboratório de Sementes da Universidade do Estado de Mato Grosso, Campus Universitário de Alta Floresta-MT. No primeiro experimento, em caixas gerbox, foi estudado o comportamento germinativo das espécies segundo o arranjo fatorial 2 x 6, sendo duas espécies (Conyza canadensis e C. bonariensis e seis potenciais osmóticos (0,0; -0,20; -0,40; -0,60; -0,80; e -1,00 MPa proporcionados pela diluição em água de polietilenoglicol. No segundo experimento, também em arranjo fatorial 2 x 6, as espécies foram submetidas a menores potenciais osmóticos (0,0; -0,05; -0,10; -0,15; -0,20; e -0,30 MPa em soluções de polietilenoglicol. No terceiro experimento, as sementes das espécies foram estudadas em esquema fatorial 2 x 2 x 5, em que as duas espécies (C. canadensis e C. bonariensis foram colocadas para germinar em dois substratos (solo de mata e areia, fornecendo-se água suficiente para atingir cinco capacidades de retenção de água (20, 40, 60, 80 e 100%. Os resultados dos experimentos revelaram que a germinação total e a velocidade de germinação das sementes de Conyza foram reduzidas com a diminuição da disponibilidade hídrica no substrato, a partir de -0,20 MPa.

  1. Differential Susceptibility of Bighorn Sheep (Ovis canadensis) and Domestic Sheep (Ovis aries) Neutrophils to Mannheimia haemolytica Leukotoxin is not due to Differential Expression of Cell Surface CD18.

    Science.gov (United States)

    Dassanayake, Rohana P; Shanthalingam, Sudarvili; Liu, Weiguo; Casas, Eduardo; Srikumaran, Subramaniam

    2017-07-01

    Bighornsheep ( Ovis canadensis ) are more susceptible to pneumonia caused by Mannheimia haemolytica than are domestic sheep ( Ovis aries ). Leukotoxin produced by M. haemolytica is the principal virulence factor involved in pneumonia pathogenesis. Although leukotoxin is cytolytic to all subsets of ruminant leukocytes, neutrophils are the most susceptible subset. Bighorn sheep neutrophils are four- to eightfold more susceptible to leukotoxin-induced cytolysis than are domestic sheep neutrophils. We hypothesized that the higher susceptibility of bighorn sheep neutrophils, in comparison to domestic sheep neutrophils, is due to higher expression of CD18, the receptor for leukotoxin on leukocytes. Our objective was to quantify CD18 expression on neutrophils of bighorn sheep and domestic sheep. Cell-surface CD18 expression on bighorn sheep and domestic sheep neutrophils was measured as antibody binding capacity of cells by flow cytometric analysis with two fluorochrome-conjugated anti-CD18 monoclonal antibodies (BAQ30A and HUH82A) and microspheres. Contrary to our expectations, CD18 expression was higher (Psheep neutrophils in comparison to bighorn sheep neutrophils. These findings suggest that the higher in vitro susceptibility to leukotoxin of bighorn sheep neutrophils compared to domestic sheep neutrophils is not due to higher expression of the leukotoxin receptor CD18 on bighorn sheep neutrophils.

  2. Rapid Identification of Echinococcus granulosus and E. canadensis Using High-Resolution Melting (HRM) Analysis by Focusing on a Single Nucleotide Polymorphism.

    Science.gov (United States)

    Safa, Ahmad Hosseini; Harandi, Majid Fasihi; Tajaddini, Mohammadhasan; Rostami-Nejad, Mohammad; Mohtashami-Pour, Mehdi; Pestehchian, Nader

    2016-07-22

    High-resolution melting (HRM) is a reliable and sensitive scanning method to detect variation in DNA sequences. We used this method to better understand the epidemiology and transmission of Echinococcus granulosus. We tested the use of HRM to discriminate the genotypes of E. granulosus and E. canadensis. One hundred forty-one hydatid cysts were collected from slaughtered animals in different parts of Isfahan-Iran in 2013. After DNA extraction, the mitochondrial cytochrome c oxidase subunit 1 (cox1) gene was amplified using PCR coupled with the HRM curve. The result of HRM analysis using partial the sequences of cox1 gene revealed that 93, 35, and 2 isolates were identified as G1, G3, and G6 genotypes, respectively. A single nucleotide polymorphism (SNP) was found in locus 9867 of the cox1 gene. This is a critical locus for the differentiation between the G6 and G7 genotypes. In the phylogenic tree, the sample with a SNP was located between the G6 and G7 genotypes, which suggest that this isolate has a G6/G7 genotype. The HRM analysis developed in the present study provides a powerful technique for molecular and epidemiological studies on echinococcosis in humans and animals.

  3. Modeling Behavior by Coastal River Otter (Lontra Canadensis in Response to Prey Availability in Prince William Sound, Alaska: A Spatially-Explicit Individual-Based Approach.

    Directory of Open Access Journals (Sweden)

    Shannon E Albeke

    Full Text Available Effects of climate change on animal behavior and cascading ecosystem responses are rarely evaluated. In coastal Alaska, social river otters (Lontra Canadensis, largely males, cooperatively forage on schooling fish and use latrine sites to communicate group associations and dominance. Conversely, solitary otters, mainly females, feed on intertidal-demersal fish and display mutual avoidance via scent marking. This behavioral variability creates "hotspots" of nutrient deposition and affects plant productivity and diversity on the terrestrial landscape. Because the abundance of schooling pelagic fish is predicted to decline with climate change, we developed a spatially-explicit individual-based model (IBM of otter behavior and tested six scenarios based on potential shifts to distribution patterns of schooling fish. Emergent patterns from the IBM closely mimicked observed otter behavior and landscape use in the absence of explicit rules of intraspecific attraction or repulsion. Model results were most sensitive to rules regarding spatial memory and activity state following an encounter with a fish school. With declining availability of schooling fish, the number of social groups and the time simulated otters spent in the company of conspecifics declined. Concurrently, model results suggested an elevation of defecation rate, a 25% increase in nitrogen transport to the terrestrial landscape, and significant changes to the spatial distribution of "hotspots" with declines in schooling fish availability. However, reductions in availability of schooling fish could lead to declines in otter density over time.

  4. Kinetics of nickel bioaccumulation and its relevance to selected cellular processes in leaves of Elodea canadensis during short-term exposure.

    Science.gov (United States)

    Maleva, Maria G; Malec, Przemysław; Prasad, Majeti Narasimha Vara; Strzałka, Kazimierz

    2016-03-01

    Elodea canadensis is an aquatic macrophyte used widely as a bioindicator for the monitoring of water quality and in the phytoremediation of metal-contaminated waters. This study considers the kinetics of nickel bioaccumulation and changes in accompanying metabolic and stress-related physiological parameters. These include photosynthetic activity, pigment content, the accumulation of thiol-containing compounds, thiobarbituric acid-reactive substance (TBARS) products, and the activity of selected antioxidant enzymes (catalase, glutathione reductase, superoxide dismutase). Elodea leaves accumulated nickel according to pseudo-second-order kinetics, and the protective responses followed a time sequence which was related to the apparent rates of nickel accumulation. The applicability of second-order kinetics to the Ni uptake by Elodea leaves during the first 8 h of exposure to the metal suggested that the passive binding of metal ions (chemisorption) was a rate-limiting step at the initial phase of Ni accumulation. This phase was accompanied by an increase in photosynthetic activity together with elevated photosynthetic pigments and protein synthesis, the enhanced activity of antioxidant enzymes, and increased thiol concentration. In contrast, there was a decrease in metabolic activity upon the accumulation of TBARS, and the decline in enzyme activity was observed in the saturation phase of Ni accumulation (8-24 h). These results show that a correlation exists between the protective response and the apparent kinetic rate of Ni uptake. Thus, the time of exposure to the toxicant is a crucial factor in the activation of specific mechanisms of Ni detoxification and stress alleviation.

  5. Presence of Antibodies to Leptospira spp. in Black-tailed Prairie Dogs ( Cynomys ludovicianus ) and Beavers ( Castor canadensis ) in Northwestern Mexico.

    Science.gov (United States)

    López-Pérez, Andrés M; Carreón-Arroyo, Gerardo; Atilano, Daniel; Vigueras-Galván, Ana L; Valdez, Carlos; Toyos, Daniel; Mendizabal, Daniel; López-Islas, Jonathan; Suzán, Gerardo

    2017-10-01

    Leptospires are widespread spirochete bacteria that infect mammals, including rodents and humans. We investigated the presence of Leptospira antibodies in two species of rodents from San Pedro River Basin (SPRB) in northwestern Mexico as part of the black-tailed prairie dog ( Cynomys ludovicianus ) monitoring plan and the North American beaver ( Castor canadensis ) reintroduction program. We sampled a total of 26 black-tailed prairie dogs and three beavers during October-November 2015. We detected antibodies against Leptospira spp. by microagglutination test in 12 (46%) prairie dogs and in two (67%) beavers. The antibody titers for seropositive rodents varied from 1:100 to 1:200, but none of the animals showed clinical signs of disease. We found seven Leptospira spp. serogroups (Autumnalis, Australis, Bataviae, Canicola, Celledoni, Grippotyphosa, and Sejroe) circulating in rodent species in SPRB. We did not find any differences between sex and age concerning Leptospira-positive rodents. Our findings suggest the presence of endemic cycles and potential risks of Leptospira infection in both species from SPRB. Although the impact of this infection on threatened species remains unclear, human activities and environmental stress might facilitate the emergence or reemergence of leptospirosis disease as has been reported elsewhere.

  6. Adverse health effects in Canada geese (Branta canadensis) associated with waste from zinc and lead mines in the Tri-State Mining District (Kansas, Oklahoma, and Missouri, USA).

    Science.gov (United States)

    van der Merwe, Deon; Carpenter, James W; Nietfeld, Jerome C; Miesner, John F

    2011-07-01

    Lead and zinc poisoning have been recorded in a variety of bird species, including migrating waterfowl such as Canada Geese (Branta canadensis), at sites contaminated with mine waste from lead and zinc mines in the Tri-State Mining District, Kansas, Oklahoma, and Missouri, USA. The adverse health impacts from mine waste on these birds may, however, be more extensive than is apparent from incidental reports of clinical disease. To characterize health impacts from mine waste on Canada Geese that do not have observable signs of poisoning, four to eight apparently healthy birds per site were collected from four contaminated sites and an uncontaminated reference site, and examined for physical and physiologic evidence of metals poisoning. Tissue concentrations of silver, aluminum, arsenic, barium, cadmium, cobalt, chromium, copper, iron, magnesium, manganese, molybdenum, nickel, lead, selenium, thallium, vanadium, and zinc were determined by inductively coupled plasma mass spectroscopy. Adverse health effects due to lead were characterized by assessing blood δ-aminolevulinic acid dehydratase (ALAD) enzyme activity. Adverse effects associated with zinc poisoning were determined from histologic examination of pancreas tissues. Elevated tissue lead concentrations and inhibited blood ALAD enzyme activities were consistently found in birds at all contaminated sites. Histopathologic signs of zinc poisoning, including fibrosis and vacuolization, were associated with elevated pancreatic zinc concentrations at one of the study sites. Adverse health effects associated with other analyzed elements, or tissue concentrations indicating potentially toxic exposure levels to these elements, were not observed.

  7. Influence of eastern hemlock (Tsuga canadensis L.) on fish community structure and function in headwater streams of the Delaware River basin

    Science.gov (United States)

    Ross, R.M.; Bennett, R.M.; Snyder, C.D.; Young, J.A.; Smith, D.R.; Lemarie, D.P.

    2003-01-01

    Hemlock (Tsuga canadensis) forest of the eastern U.S. are in decline due to invasion by the exotic insect hemlock woolly adelgid (Adelges tsugae). Aquatic biodiversity in hemlock ecosystems has not been documented; thus the true impact of the infestation cannot be assessed. We compared ichthyofaunal assemblages and trophic structure of streams draining hemlock and hardwood forests by sampling first- and second-order streams draining 14 paired hemlock and hardwood stands during base flows in July 1997 at the Delaware Water Gap National Recreation Area of Pennsylvania and New Jersey. Over 1400 fish of 15 species and 7 families were collected, but hemlock and hardwood streams individually harbored only one to four species. Brook trout (Salvelinus fontinalis) and brown trout (Salmo trutta) were two to three times as prevalent in hemlock than hardwood streams. Insectivorous fishes occurred in significantly higher proportion in streams of hardwood (0.90) than hemlock (0.46) stands, while piscivores occurred more often in hemlock (0.85) than hardwood (0.54) stands. Functional (trophic) diversity of fishes in hemlock and second-order streams was numerically greater than that of hardwood and first-order streams. Species composition also differed by stream order and terrain type. Biodiversity is threatened at several levels within hemlock ecosystems at risk to the hemlock woolly adelgid in eastern U.S. forests.

  8. Physiological Responses to N-NO3 and N-NH4 of Triazine Resistant and Susceptible Plants of Horseweed (Erigeron canadensis L.

    Directory of Open Access Journals (Sweden)

    Ryszard Stanek

    2013-12-01

    Full Text Available Triazine resistant and susceptible biotypes of horseweed (Erigeron canadensis L. were grown under controlled conditions in nutrient solution with NH4 or NO3 ions as nitrogen source. Indicators such as: dry matter, CO2 assimilation, chloroplasts activity, dark respiration and the content of K, Ca, Mg in the above ground parts displayed lower levels when plants were fed with NH4 than with NO ions. Reduction of these indicators was stronger for the triazine susceptible plants which grew better than their resistant counterparts when fed with N-NO3. The triazine resistant plants grown with N-NH4 contained more protein-N and K than the susceptible ones. Chloroplasts of the resistant plants were also less sensitive to NH4CL treatment. It is concluded that the resistant plants appear to be more tolerant to NH4 ions as compared with their susceptible counterparts. For this reason application of ammonium forms of nitrogen fertilization in horticultural practice could favour spreading of triazine resistant horseweed.

  9. Chapter 6: The scientific basis for conserving forest carnivores: considerations for management

    Science.gov (United States)

    L. Jack Lyon; Keith B. Aubry; William J. Zielinski; Steven W. Buskirk; Leonard F. Ruggiero

    1994-01-01

    The reviews presented in previous chapters reveal substantial gaps in our knowledge about marten, fisher, lynx, and wolverine. These gaps severely constrain our ability to design reliable conservation strategies. This problem will be explored in depth in Chapter 7. In this chapter, our objective is to discuss management considerations resulting from what we currently...

  10. Usefulness of the wildlife species as a focal species in the forest ...

    African Journals Online (AJOL)

    yasinucarlı

    2011-03-14

    Mar 14, 2011 ... keystone species are the most important species in that ecosystems to sustainability. ... bear, Wolf and Eurasian Lynx can be also used as a flagship, indicator and ... Washington's Pacific coast. ... sidered keystones because their effect is not dispro- ..... conservation of South American terrestrial mammals.

  11. 78 FR 17632 - Caribou-Targhee National Forest; Idaho and Wyoming; Amendment to the Targhee Revised Forest Plan...

    Science.gov (United States)

    2013-03-22

    ...; Amendment to the Targhee Revised Forest Plan--Canada Lynx Habitat AGENCY: Forest Service, USDA. ACTION... Forest proposes to amend the Targhee Revised Forest Plan (1997) to include a map identifying specific... Administrative Review Process: The decision on this proposed plan amendment will be subject to the objection...

  12. 10 lineas de investigacion para empezar el curso Del big bang del proyecto LHC a la polipildora de Valentin Fuster

    CERN Multimedia

    2007-01-01

    The entrails of the universe, the keys of the biological clock, diseases like Alzheimer and the processes that govern our brain, the mother celles, the physic of materials, the survival of the lynx, the fight against cancer, etc...(2,5 pages)

  13. Monitoring velkých šelem v Beskydech

    Czech Academy of Sciences Publication Activity Database

    Koubek, Petr; Barančeková, Miroslava; Krojerová, Jarmila; Homolka, Miloslav; Konupka, Petr; Vallo, Peter

    2013-01-01

    Roč. 14, č. 6 (2013), s. 12-15 ISSN 1212-8422 R&D Projects: GA MŠk EE2.3.35.0026 Institutional support: RVO:68081766 Keywords : European lynx * brown bear * wolf * telemetry * camera-traps * monitoring Subject RIV: EG - Zoology

  14. High-Redshift Radio Galaxies from Deep Fields

    Indian Academy of Sciences (India)

    2016-01-27

    Jan 27, 2016 ... High-Redshift Radio Galaxies from Deep Fields ... Here we present results from the deep 150 MHz observations of LBDS-Lynx field, which has been imaged at 327, ... Articles are also visible in Web of Science immediately.

  15. 77 FR 75646 - Kenai National Wildlife Refuge, Soldotna, AK; Draft Environmental Impact Statement for the...

    Science.gov (United States)

    2012-12-21

    ... intermingled with hundreds of lakes. Boreal forests are home to moose, wolves, black and brown bears, lynx... FXRS12650700000] 123 Kenai National Wildlife Refuge, Soldotna, AK; Draft Environmental Impact Statement for the... . Send your comments or requests for information by any one of the following methods: Email: fw7_kenai...

  16. 78 FR 32270 - Kenai National Wildlife Refuge, Soldotna, AK; Environmental Impact Statement for the Shadura...

    Science.gov (United States)

    2013-05-29

    ... and brown bears, lynx, snowshoe hares, and numerous species of Neotropical birds, such as olive-sided... FXRS12650700000 123] Kenai National Wildlife Refuge, Soldotna, AK; Environmental Impact Statement for the Shadura...: EMail: fw7_kenai[email protected] ; Fax: Attn: Peter Wikoff, (907) 786-3976; U.S. Mail: Peter Wikoff...

  17. Mapping trends of large and medium size carnivores of conservation interest in Romania

    Directory of Open Access Journals (Sweden)

    Constantin Cazacu

    2014-07-01

    Full Text Available We analysed yearly estimates of population size data during 2001-2012 for five carnivores species of conservation interest (Ursus arctos, Canis lupus, Lynx lynx, Felis silvestris and Canis aureus. Population size estimations were done by the game management authorities and integrated by the competent authorities on the Ministry of Environment and Climate Change. Trends in data were detected using non-parametric Mann-Kendall test. This test was chosen considering the short length of data series and its usefulness for non-normal distributed data. The trend was tested at three spatial scales: game management units (n=1565, biogeographical region (n=5 and national. Trends depicted for each game management unit were plotted using ArcGIS, resulting species trend distribution maps. For the studied period increasing population trends were observed for Ursus arctos, Canis lupus, Canis aureus and Lynx lynx, while for Felis silvestris there was no trend recorded. Such an analysis in especially useful for conservation proposes, game management and reporting obligations under article 17 of the EC Habitat Directive, using population trend as a proxy for population dynamics. We conclude that the status of the five carnivore species is favourable during the study period.

  18. Temporal Loss of Tsc1: Neural Development and Brain Disease in Tuberous Sclerosis

    Science.gov (United States)

    2014-06-01

    recorded using a Cheetah Data Acquisition System (NeuraLynx). The probe was lowered 1,600 mm and responses to vibrissa deflections confirmed electrode...Local field potential (LFP) signals were sampled (30303 Hz), filtered (0.9 to 9000 Hz), and recorded using a Cheetah Data Acquisition System

  19. Can only poorer European countries afford large carnivores?

    Science.gov (United States)

    Kojola, Ilpo; Hallikainen, Ville; Helle, Timo; Swenson, Jon E

    2018-01-01

    One of the classic approaches in environmental economics is the environmental Kuznets curve, which predicts that when a national economy grows from low to medium levels, threats to biodiversity conservation increase, but they decrease when the economy moves from medium to high. We evaluated this approach by examining how population densities of the brown bear (Ursus arctos), gray wolf (Canis lupus), and Eurasian lynx (Lynx lynx) were related to the national economy in 24 European countries. We used forest proportions, the existence of a compensation system, and country group (former socialist countries, Nordic countries, other countries) as covariates in a linear model with the first- and the second-order polynomial terms of per capita gross domestic product (GDP). Country group was treated as a random factor, but remained insignificant and was ignored. All models concerning brown bear and wolf provided evidence that population densities decreased with increasing GDP, but densities of lynx were virtually independent of GDP. Models for the wolf explained >80% of the variation in densities, without a difference between the models with all independent variables and the model with only GDP. For the bear, the model with GDP alone accounted for 10%, and all three variables 33%, of the variation in densities. Wolves exhibit a higher capacity for dispersal and reproduction than bear or lynx, but still exists at the lowest densities in wealthy European countries. We are aware that several other factors, not available for our models, influenced large carnivore densities. Based on the pronounced differences among large carnivore species in their countrywide relationships between densities and GDP, and a strikingly high relationship for the gray wolf, we suggest that our results reflected differences in political history and public acceptance of these species among countries. The compensation paid for the damages caused by the carnivores is not a key to higher carnivore

  20. Assessment of an Impact of Mechanical Regulation on Selected Morphometric and Productive Parameters of Invasive Species Solidago Canadensis Population in Agricultural Land

    Directory of Open Access Journals (Sweden)

    Končeková Lýdia

    2015-12-01

    Full Text Available Repeated mowing is considered as one of the effective control methods against species of the genus Solidago. This paper evaluates the impact of the repeated mowing on selected morphometric and productive characteristics of the invasive neophyte Solidago canadensis in the district of Rimavská Sobota in Central Slovakia. Permanent research plots (PRPs were established within anthropogenic habitat on an abandoned land that was divided into two variants. In the first variant, the mechanical regulation - mowing was applied. The second variant was without the regulation. The mechanical regulation of the populations was carried out in June and August during the growing season 2011. The results showed that the mechanical regulation did not have a clear impact on the population density. The decreasing trend of the number of shoots within the mowed variant was found only in one research plot (PRP3. The other plots showed an increase in the number of individuals by 2.7 and 32.7% between the mowings. Statistically highly significant differences in terms of the mowing impact on the height of the individuals were found in all PRPs. The difference in the weight of dry aboveground biomass between the mowings was 221.87 g, which represents 36.41%. Double the difference (48.8% was recorded in the dry weight of the underground biomass in the regulated stand compared with the unregulated stand (165.1 and 322.5 g/m2, respectively. Although there was a short-term success achieved by the application of the two mowings during the growing period, the pursued objective was not reached.

  1. Nuclear and Mitochondrial DNA Analyses of Golden Eagles (Aquila chrysaetos canadensis from Three Areas in Western North America; Initial Results and Conservation Implications.

    Directory of Open Access Journals (Sweden)

    Erica H Craig

    Full Text Available Understanding the genetics of a population is a critical component of developing conservation strategies. We used archived tissue samples from golden eagles (Aquila chrysaetos canadensis in three geographic regions of western North America to conduct a preliminary study of the genetics of the North American subspecies, and to provide data for United States Fish and Wildlife Service (USFWS decision-making for golden eagle management. We used a combination of mitochondrial DNA (mtDNA D-loop sequences and 16 nuclear DNA (nDNA microsatellite loci to investigate the extent of gene flow among our sampling areas in Idaho, California and Alaska and to determine if we could distinguish birds from the different geographic regions based on their genetic profiles. Our results indicate high genetic diversity, low genetic structure and high connectivity. Nuclear DNA Fst values between Idaho and California were low but significantly different from zero (0.026. Bayesian clustering methods indicated a single population, and we were unable to distinguish summer breeding residents from different regions. Results of the mtDNA AMOVA showed that most of the haplotype variation (97% was within the geographic populations while 3% variation was partitioned among them. One haplotype was common to all three areas. One region-specific haplotype was detected in California and one in Idaho, but additional sampling is required to determine if these haplotypes are unique to those geographic areas or a sampling artifact. We discuss potential sources of the high gene flow for this species including natal and breeding dispersal, floaters, and changes in migratory behavior as a result of environmental factors such as climate change and habitat alteration. Our preliminary findings can help inform the USFWS in development of golden eagle management strategies and provide a basis for additional research into the complex dynamics of the North American subspecies.

  2. Transmission of Mannheimia haemolytica from domestic sheep (Ovis aries) to bighorn sheep (Ovis canadensis): unequivocal demonstration with green fluorescent protein-tagged organisms.

    Science.gov (United States)

    Lawrence, Paulraj K; Shanthalingam, Sudarvili; Dassanayake, Rohana P; Subramaniam, Renuka; Herndon, Caroline N; Knowles, Donald P; Rurangirwa, Fred R; Foreyt, William J; Wayman, Gary; Marciel, Ann Marie; Highlander, Sarah K; Srikumaran, Subramaniam

    2010-07-01

    Previous studies demonstrated that bighorn sheep (Ovis canadensis) died of pneumonia when commingled with domestic sheep (Ovis aries) but did not conclusively prove that the responsible pathogens were transmitted from domestic to bighorn sheep. The objective of this study was to determine, unambiguously, whether Mannheimia haemolytica can be transmitted from domestic to bighorn sheep when they commingle. Four isolates of M. haemolytica were obtained from the pharynx of two of four domestic sheep and tagged with a plasmid carrying the genes for green fluorescent protein (GFP) and ampicillin resistance (AP(R)). Four domestic sheep, colonized with the tagged bacteria, were kept about 10 m apart from four bighorn sheep for 1 mo with no clinical signs of pneumonia observed in the bighorn sheep during that period. The domestic and bighorn sheep were then allowed to have fence-line contact for 2 mo. During that period, three bighorn sheep acquired the tagged bacteria from the domestic sheep. At the end of the 2 mo of fence-line contact, the animals were allowed to commingle. All four bighorn sheep died 2 days to 9 days following commingling. The lungs from all four bighorn sheep showed gross and histopathologic lesions characteristic of M. haemolytica pneumonia. Tagged M. haemolytica were isolated from all four bighorn sheep, as confirmed by growth in ampicillin-containing culture medium, PCR-amplification of genes encoding GFP and Ap(R), and immunofluorescent staining of GFP. These results unequivocally demonstrate transmission of M. haemolytica from domestic to bighorn sheep, resulting in pneumonia and death of bighorn sheep.

  3. Differential expression of interleukin-8 by polymorphonuclear leukocytes of two closely related species, Ovis canadensis and Ovis aries, in response to Mannheimia haemolytica infection.

    Science.gov (United States)

    Herndon, Caroline N; Foreyt, William J; Srikumaran, Subramaniam

    2010-08-01

    The pneumonic lesions and mortality caused by Mannheimia haemolytica in bighorn sheep (BHS; Ovis canadensis) are more severe than those in the related species, domestic sheep (DS; Ovis aries), under both natural and experimental conditions. Leukotoxin (Lkt) and lipopolysaccharide (LPS) are the most important virulence factors of this organism. One hallmark of pathogenesis of pneumonia is the influx of polymorphonuclear leukocytes (PMNs) into the lungs. Lkt-induced cytolysis of PMNs results in the release of cytotoxic compounds capable of damaging lung tissue. Interleukin-8 (IL-8) is a potent PMN chemoattractant. The objective of the present study was to determine if there is differential expression of IL-8 by the macrophages and PMNs of BHS and DS in response to M. haemolytica. Macrophages and PMNs of BHS and DS were stimulated with heat-killed M. haemolytica or LPS. IL-8 expression by the cells was measured by enzyme-linked immunosorbent assays and real-time reverse transcription-PCR (RT-PCR). The PMNs of BHS expressed severalfold higher levels of IL-8 than those of DS upon stimulation. Lesional lung tissue of M. haemolytica-infected BHS contained significantly higher levels of IL-8 than nonlesional tissue. The bronchoalveolar lavage (BAL) fluid of infected BHS also contained higher levels of IL-8 than that of infected DS. Depletion of IL-8 reduced migration of PMNs toward BAL fluid by approximately 50%, indicating that IL-8 is integral to PMN recruitment to the lung during M. haemolytica infection. Excessive production of IL-8, enhanced recruitment of PMNs, and PMN lysis by Lkt are likely responsible for the severity of the lung lesions in M. haemolytica-infected BHS.

  4. Nuclear and Mitochondrial DNA Analyses of Golden Eagles (Aquila chrysaetos canadensis) from Three Areas in Western North America; Initial Results and Conservation Implications.

    Science.gov (United States)

    Craig, Erica H; Adams, Jennifer R; Waits, Lisette P; Fuller, Mark R; Whittington, Diana M

    2016-01-01

    Understanding the genetics of a population is a critical component of developing conservation strategies. We used archived tissue samples from golden eagles (Aquila chrysaetos canadensis) in three geographic regions of western North America to conduct a preliminary study of the genetics of the North American subspecies, and to provide data for United States Fish and Wildlife Service (USFWS) decision-making for golden eagle management. We used a combination of mitochondrial DNA (mtDNA) D-loop sequences and 16 nuclear DNA (nDNA) microsatellite loci to investigate the extent of gene flow among our sampling areas in Idaho, California and Alaska and to determine if we could distinguish birds from the different geographic regions based on their genetic profiles. Our results indicate high genetic diversity, low genetic structure and high connectivity. Nuclear DNA Fst values between Idaho and California were low but significantly different from zero (0.026). Bayesian clustering methods indicated a single population, and we were unable to distinguish summer breeding residents from different regions. Results of the mtDNA AMOVA showed that most of the haplotype variation (97%) was within the geographic populations while 3% variation was partitioned among them. One haplotype was common to all three areas. One region-specific haplotype was detected in California and one in Idaho, but additional sampling is required to determine if these haplotypes are unique to those geographic areas or a sampling artifact. We discuss potential sources of the high gene flow for this species including natal and breeding dispersal, floaters, and changes in migratory behavior as a result of environmental factors such as climate change and habitat alteration. Our preliminary findings can help inform the USFWS in development of golden eagle management strategies and provide a basis for additional research into the complex dynamics of the North American subspecies.

  5. Substrate-Driven Convergence of the Microbial Community in Lignocellulose-Amended Enrichments of Gut Microflora from the Canadian Beaver (Castor canadensis) and North American Moose (Alces americanus).

    Science.gov (United States)

    Wong, Mabel T; Wang, Weijun; Lacourt, Michael; Couturier, Marie; Edwards, Elizabeth A; Master, Emma R

    2016-01-01

    Strategic enrichment of microcosms derived from wood foragers can facilitate the discovery of key microbes that produce enzymes for the bioconversion of plant fiber (i.e., lignocellulose) into valuable chemicals and energy. In this study, lignocellulose-degrading microorganisms from the digestive systems of Canadian beaver (Castor canadensis) and North American moose (Alces americanus) were enriched under methanogenic conditions for over 3 years using various wood-derived substrates, including (i) cellulose (C), (ii) cellulose + lignosulphonate (CL), (iii) cellulose + tannic acid (CT), and (iv) poplar hydrolysate (PH). Substantial improvement in the conversion of amended organic substrates into biogas was observed in both beaver dropping and moose rumen enrichment cultures over the enrichment phases (up to 0.36-0.68 ml biogas/mg COD added), except for enrichments amended with tannic acid where conversion was approximately 0.15 ml biogas/mg COD added. Multiplex-pyrosequencing of 16S rRNA genes revealed systematic shifts in the population of Firmicutes, Bacteroidetes, Chlorobi, Spirochaetes, Chloroflexi, and Elusimicrobia in response to the enrichment. These shifts were predominantly substrate driven, not inoculum driven, as revealed by both UPGMA clustering pattern and OTU distribution. Additionally, the relative abundance of multiple OTUs from poorly defined taxonomic lineages increased from less than 1% to 25-50% in microcosms amended with lignocellulosic substrates, including OTUs from classes SJA-28, Endomicrobia, orders Bacteroidales, OPB54, and family Lachnospiraceae. This study provides the first direct comparison of shifts in microbial communities that occurred in different environmental samples in response to multiple relevant lignocellulosic carbon sources, and demonstrates the potential of enrichment to increase the abundance of key lignocellulolytic microorganisms and encoded activities.

  6. Evaluating potential overlap between pack stock and Sierra Nevada bighorn sheep (Ovis canadensis sierrae) in Sequoia and Kings Canyon National Parks, California

    Science.gov (United States)

    Klinger, Robert C.; Few, Alexandra P.; Knox, Kathleen A.; Hatfield, Brian E.; Clark, Jonathan; German, David W.; Stephenson, Thomas R.

    2015-01-01

    Pack stock (horses, mules, burros, llamas, and goats) are frequently assumed to have negative effects on public lands, but there is a general lack of data to be able to quantify the degree to which this is actually the case. Sequoia and Kings Canyon National Parks have received complaints that pack stock may affect Sierra Nevada bighorn sheep (Ovis canadensis sierrae; SNBS), a federally endangered subspecies that occurs in largely disjunct herds in the Sierra Nevada Range of California. The potential effects are thought to be displacement of SNBS from meadows on their summer range (altered habitat use) or, more indirectly, through changes in SNBS habitat or forage quality. Our goals were to conduct an association analysis to quantify the degree of potential spatial overlap in meadow use between SNBS and pack stock and to compare differences in vegetation community composition, structure, and diversity among meadows with different levels of use by bighorn sheep and pack stock. For the association analysis, we used two approaches: (1) we quantified the proportion of meadows that were within the herd home ranges of bighorn sheep and were potentially open to pack stock, and, (2) we used Monte Carlo simulations and use-availability analyses to compare the proportion of meadows used by bighorn sheep relative to the proportional occurrence or area of meadows available to bighorn sheep that were used by pack stock. To evaluate potential effects of pack stock on meadow plant communities and SNBS forage, we sampled vegetation in 2011 and 2012 at 100 plots to generate data that allowed us to compare:

  7. Nuclear and mitochondrial DNA analyses of golden eagles (Aquila chrysaetos canadensis) from three areas in western North America; initial results and conservation implications

    Science.gov (United States)

    Craig, Erica H; Adams, Jennifer R.; Waits, Lisette P.; Fuller, Mark R.; Whittington, Diana M.

    2016-01-01

    Understanding the genetics of a population is a critical component of developing conservation strategies. We used archived tissue samples from golden eagles (Aquila chrysaetos canadensis) in three geographic regions of western North America to conduct a preliminary study of the genetics of the North American subspecies, and to provide data for United States Fish and Wildlife Service (USFWS) decision-making for golden eagle management. We used a combination of mitochondrial DNA (mtDNA) D-loop sequences and 16 nuclear DNA (nDNA) microsatellite loci to investigate the extent of gene flow among our sampling areas in Idaho, California and Alaska and to determine if we could distinguish birds from the different geographic regions based on their genetic profiles. Our results indicate high genetic diversity, low genetic structure and high connectivity. Nuclear DNA Fst values between Idaho and California were low but significantly different from zero (0.026). Bayesian clustering methods indicated a single population, and we were unable to distinguish summer breeding residents from different regions. Results of the mtDNA AMOVA showed that most of the haplotype variation (97%) was within the geographic populations while 3% variation was partitioned among them. One haplotype was common to all three areas. One region-specific haplotype was detected in California and one in Idaho, but additional sampling is required to determine if these haplotypes are unique to those geographic areas or a sampling artifact. We discuss potential sources of the high gene flow for this species including natal and breeding dispersal, floaters, and changes in migratory behavior as a result of environmental factors such as climate change and habitat alteration. Our preliminary findings can help inform the USFWS in development of golden eagle management strategies and provide a basis for additional research into the complex dynamics of the North American subspecies.

  8. Parámetros reproductivos y distribución geográfica potencial de las áreas de anidación de Grus canadensis nesiotes (Aves, Gruidae en Cuba: implicaciones para su conservación

    Directory of Open Access Journals (Sweden)

    Ferrer–Sánchez, Y

    2017-03-01

    Full Text Available Reproductive parameters and potential geographical distribution of nesting areas of Grus canadensis nesiotes (Aves, Gruidae in Cuba: conservation implications Grus canadensis nesiotes (Cuban sandhill crane is an endemic and endangered subspecies from Cuba. Protection of wetland habitats is essential for survival of this species, but studies that could contribute to its management and conservation are lacking. In this study we recorded the reproductive parameters of Grus canadensis nesiotes in eight breeding seasons between 2005 and 2015 in a wetland of Cuba. We modeled and characterized the potential geographical distribution of the nesting areas, analyzing its representation within protected areas. Maximum entropy algorithm and habitat variables were used for modeling (100 m of pixel size. To characterize the potential distribution we calculated each land–use–vegetation within the potential distribution. We used the same procedure to determine the extent of the protected area. A hundred and fifty–one nests were located in marsh grasslands. These nests were simple platforms built on wet soil/water; the largest nests were observed in 2006. Seventy percent of nests had two eggs (1.7 eggs/nest and 63.5% were successful with 1.6 chicks per successful nest. The potential nesting habitat is a narrow stretch (242 km2 located in the center of the wetland. The area with high probability of presence makes up 13.8% of the predicted distribution. Sixty percent of marsh grassland of the study area was included in the potential distribution, while the proportion of crops (1.2% and pastures (2.1% was low. Managed protected areas cover only 39.1% of the potential distribution of the nesting sites and 12% of the high probability areas. We propose three priority sites to study and monitor nesting of the subspecies. Species conservation actions should consider the potential geographical distribution of nesting sites both inside and outside the protected

  9. Identificación de los mecanismos subyacentes a la invasión de Castor canadensis (Rodentia en el archipiélago de Tierra del Fuego, Chile Identifying the mechanisms underlying the invasion of Castor canadensis (Rodentia into Tierra del Fuego archipelago, Chile

    Directory of Open Access Journals (Sweden)

    PETRA K WALLEM

    2007-09-01

    Full Text Available Castor canadensis es considerado un ingeniero ecosistémico arquetípico, ya que altera el estado de factores bióticos y abióticos, mediante interacciones no tróficas, modificando sustancialmente los ecosistemas que habita. Esta especie fue introducida en la Isla Grande de Tierra del Fuego en 1946 por el gobierno argentino, con el fin de estimular la industria peletera. Actualmente se encuentra presente en las principales islas del archipiélago, incluyendo Tierra del Fuego, Navarino, Dawson y Hoste y ocupando habitat tan contrastantes como los bosques subpolares magallánicos, el matorral y la estepa patagónica. Su éxito en estos habitat sugiere que su expansión solo se verá limitada por la disponibilidad de recursos hídricos. De acuerdo a lo observado en Tierra del Fuego, en ausencia de un programa de control poblacional, los castores amenazan con establecerse en todos los bosques templados nativos del continente (entre los 35 y 55° S y ocupar los habitat de matorral y pastizal circundantes a los mismos. El presente artículo propone tres hipótesis referentes a los mecanismos subyacentes al éxito de esta invasión: el escape de enemigos naturales, la oportunidad de recursos, y la autofacilitación mediante interacciones no tróficas. Los antecedentes disponibles develan patrones conductuales (e.g., el establecimiento de colonias en forma independiente de la cercanía de recursos maderables, un aparente crecimiento poblacional irruptivo, así como una explotación centrada en Nothofagus pumilio, especie dominante en los bosques magallánicos que sugieren la operación de los mecanismos de escape de enemigos naturales y oportunidad de recursos. También se observa una mayor densidad de colonias activas en habitat que presentan mayor extensión de modificación ambiental, sugiriendo el accionar del mecanismo de autofacilitación. Si bien la información reunida no permite poner a prueba las hipótesis propuestas, sí entrega un marco

  10. Suborbital Reusable Launch Vehicles as an Opportunity to Consolidate and Calibrate Ground Based and Satellite Instruments

    Science.gov (United States)

    Papadopoulos, K.

    2014-12-01

    XCOR Aerospace, a commercial space company, is planning to provide frequent, low cost access to near-Earth space on the Lynx suborbital Reusable Launch Vehicle (sRLV). Measurements in the external vacuum environment can be made and can launch from most runways on a limited lead time. Lynx can operate as a platform to perform suborbital in situ measurements and remote sensing to supplement models and simulations with new data points. These measurements can serve as a quantitative link to existing instruments and be used as a basis to calibrate detectors on spacecraft. Easier access to suborbital data can improve the longevity and cohesiveness of spacecraft and ground-based resources. A study of how these measurements can be made on Lynx sRLV will be presented. At the boundary between terrestrial and space weather, measurements from instruments on Lynx can help develop algorithms to optimize the consolidation of ground and satellite based data as well as assimilate global models with new data points. For example, current tides and the equatorial electrojet, essential to understanding the Thermosphere-Ionosphere system, can be measured in situ frequently and on short notice. Furthermore, a negative-ion spectrometer and a Faraday cup, can take measurements of the D-region ion composition. A differential GPS receiver can infer the spatial gradient of ionospheric electron density. Instruments and optics on spacecraft degrade over time, leading to calibration drift. Lynx can be a cost effective platform for deploying a reference instrument to calibrate satellites with a frequent and fast turnaround and a successful return of the instrument. A calibrated reference instrument on Lynx can make collocated observations as another instrument and corrections are made for the latter, thus ensuring data consistency and mission longevity. Aboard a sRLV, atmospheric conditions that distort remotely sensed data (ground and spacecraft based) can be measured in situ. Moreover, an

  11. Bighorn sheep (Ovis canadensis) survivorship and habitat studies in Bighorn Canyon National Recreation Area and surrounding lands, Wyoming and Montana, 2000–2003

    Science.gov (United States)

    Schoenecker, Kathryn A.; Singer, Francis J.; Grams, Kayla A.; Roelle, James E.

    2004-01-01

    In the 1850s, bighorn sheep (Ovis canadensis) were numerous and distributed throughout the Bighorn and Pryor Mountains of Montana and Wyoming. After European settlement, bighorn sheep populations declined, and local extinctions occurred in much of their historic range in the western United States. The current bighorn sheep population of Bighorn Canyon National Recreation Area (BICA) is the product of several reintroductions into BICA and surrounding lands. Following a release in 1973 and growth rates near maximum potential of 19.8% per year, the population grew to an estimated peak population of about 211 animals in 1993 and 1994 (Kissell and others, 1996). Recent counts indicate the bighorn sheep population has declined. Kissell and others (1996) reported that the population began to decline rapidly in 1995 and 1996. He noted low ewe:lamb ratios during the decline phase. Bighorn sheep numbers declined to the lowest minimum viable population size of 100 animals recommended by several bighorn sheep experts (Bailey, 1990; Berger, 1990; Smith and others, 1991). National Park Service (NPS) and Bureau of Land Management (BLM) managers were concerned about the decline and requested a study of its causes. In 2000, the U.S. Geological Survey- Biological Resources Division (USGS-BRD) received funding to start a 3-year study of survivorship, condition, and population growth rate of the BICA bighorn sheep population.Several possibilities exist for the bighorn sheep decline. The herd may have experienced a rapid population expansion, followed by a decline to stability at a lower long-term carrying capacity. This pattern of apparently overshooting carrying capacity following an initial release has been reported for a number of ungulates (Caughley, 1976). Disease may have caused the decline; predation and/or competition with wild horses (Equus caballus) may also have been factors. A spatial model of wild horse carrying capacity (Coughenour, 1999) was developed to assist managers

  12. Alternativas de propagação na produção de óleo essencial de Mentha canadensis L. no Litoral Norte Catarinense Propagation alternatives for the production of Mentha canadensis L. essential oil at the Santa Catarina State northern coast

    Directory of Open Access Journals (Sweden)

    V.M.C.S. Santos

    2012-01-01

    Full Text Available O gênero Mentha é cultivado mundialmente para a produção de óleo essencial, com ênfase no constituinte mentol, amplamente utilizado nas indústrias farmacêutica, cosmética, alimentícia e de higiene pessoal. Este trabalho teve como objetivo avaliar o efeito da utilização de diferentes estruturas de propagação e épocas de colheita de Mentha canadensis L. no Litoral Norte Catarinense. O delineamento experimental foi em blocos ao acaso em esquema fatorial 4x2, comparando quatro estruturas de propagação (estolões com 10, 15 e 20 cm de comprimento e estacas com 5 cm de comprimento e duas épocas de colheita (95 dias após o plantio e 60 dias após a rebrota. Em cada colheita foi avaliado o crescimento vegetativo e produtividade de óleo essencial e de mentol. Na primeira colheita, houve maior acúmulo de massa seca de folhas, caules e total; produtividade de óleo essencial e de mentol quando o plantio foi realizado com mudas obtidas por estaquia. Na segunda colheita, no entanto, não houve diferença significativa entre os tratamentos para todas as variáveis analisadas. A primeira colheita resultou em médias superiores em relação à segunda colheita à exceção do plantio por estolão com 10 cm em todas as variáveis e estolão com 20 cm para a massa seca de caules. Os constituintes majoritários do óleo essencial foram mentol, mentona e neomentol. Os teores de mentol foram significativamente superiores na segunda colheita e de mentona na primeira colheita, sendo que o neomentol não apresentou diferença significativa em ambas as colheitas. Os resultados obtidos sugerem que a colheita antecipada da rebrota proporciona maior concentração de mentol no óleo essencial. O uso de estolões como estrutura de propagação pode ser considerada uma alternativa viável para menta, pois além de apresentar níveis similares de produção de óleo essencial e de mentol a partir da segunda colheita ao de áreas implantadas com mudas

  13. Functional interaction between Lypd6 and nicotinic acetylcholine receptors

    DEFF Research Database (Denmark)

    Arvaniti, Maria; Jensen, Majbrit M; Soni, Neeraj

    2016-01-01

    Nicotinic acetylcholine receptors (nAChRs) affect multiple physiological functions in the brain and their functions are modulated by regulatory proteins of the Lynx family. Here, we report for the first time a direct interaction of the Lynx protein LY6/PLAUR domain-containing 6 (Lypd6) with n...... brain. Additionally, soluble recombinant Lypd6 protein attenuates nicotine-induced hippocampal inward currents in rat brain slices and decreases nicotine-induced extracellular signal-regulated kinase phosphorylation in PC12 cells, suggesting that binding of Lypd6 is sufficient to inhibit n......AChR-mediated intracellular signaling. We further show that perinatal nicotine exposure in rats (4 mg/kg/day through minipumps to dams from embryonic day 7 to post-natal day 21) significantly increases Lypd6 protein levels in the hippocampus in adulthood, which did not occur after exposure to nicotine in adulthood only. Our...

  14. New Platforms for Suborbital Astronomical Observations and In Situ Atmospheric Measurements: Spacecraft, Instruments, and Facilities

    Science.gov (United States)

    Rodway, K.; DeForest, C. E.; Diller, J.; Vilas, F.; Sollitt, L. S.; Reyes, M. F.; Filo, A. S.; Anderson, E.

    2014-12-01

    Suborbital astronomical observations have over 50 years' history using NASA's sounding rockets and experimental space planes. The new commercial space industry is developing suborbital reusable launch vehicles (sRLV's) to provide low-cost, flexible, and frequent access to space at ~100 km altitude. In the case of XCOR Aerospace's Lynx spacecraft, the vehicle design and capabilities work well for hosting specially designed experiments that can be flown with a human-tended researcher or alone with the pilot on a customized mission. Some of the first-generation instruments and facilities that will conduct solar observations on dedicated Lynx science missions include the SwRI Solar Instrument Pointing Platform (SSIPP) and Atsa Suborbital Observatory, as well as KickSat sprites, which are picosatellites for in situ atmospheric and solar phenomena measurements. The SSIPP is a demonstration two-stage pointed solar observatory that operates inside the Lynx cockpit. The coarse pointing stage includes the pilot in the feedback loop, and the fine stage stabilizes the solar image to achieve arcsecond class pointing. SSIPP is a stepping-stone to future external instruments that can operate with larger apertures and shorter wavelengths in the solar atmosphere. The Planetary Science Institute's Atsa Suborbital Observatory combines the strengths of ground-based observatories and space-based observing to create a facility where a telescope is maintained and used interchangeably with either in-house facility instruments or user-provided instruments. The Atsa prototype is a proof of concept, hand-guided camera that mounts on the interior of the Lynx cockpit to test target acquisition and tracking for human-operated suborbital astronomy. KickSat sprites are mass-producible, one inch printed circuit boards (PCBs) populated by programmable off the shelf microprocessors and radios for real time data transmission. The sprite PCBs can integrate chip-based radiometers, magnetometers

  15. Environmental Assessment for the Construction of Facilities in Support of the 343d Training Squadron, 37th Training Group, Security Forces Apprentice Course at JBSA-Camp Bullis, Texas

    Science.gov (United States)

    2012-11-01

    territorial seas . Jurisdictional boundaries for waters of the U.S. are defined in the field as the ordinary high water mark, which is that line on...Lynx rufus), gray fox, coyote, and occasionally mountain lion (Felis concolor) (U.S. Army 2007). The northern cardinal (Cardinal cardinalis) and... parasitism . Surveys have been conducted for golden-cheeked warbler on JBSA-Camp Bullis since 1991, and individuals have been detected in every training

  16. Development of device drivers embedded in real time OS for SPring-8 SR control system

    International Nuclear Information System (INIS)

    Masuda, T.; Fujiwara, S.; Nakamura, T.; Takebe, H.; Wada, T.

    1994-01-01

    A distributed computer system has been adopted for the SPring-8 SR control system. For lower level computers, we intend to adopt VMEbus computer systems with the real time OS which are compliant with POSIX. For R and D study, we introduced LynxOS and wrote device drivers for Digital Output(DO), Digital Input(DI) and Analog Input(AI) boards on VMEbus. They were successfully operated with device drivers. (author)

  17. Exploration of the Use of Unmanned Aerial Vehicles along with Other Assets to Enhance Border Protection

    Science.gov (United States)

    2009-06-01

    Border Initiative SUAV Small Unmanned Aerial Vehicle SAR Synthetic Aperture Radar TTPs Tactics, Techniques, And Procedures TRVS Trailer Remote...2008). 4 3. Overview of Illegal Activities According to the CBP, 178,770 pounds of cocaine, 2,178 pounds of heroin, 2,471,931 pounds of marijuana ...Raytheon Company Web Site) Another component of Predator B is the high- resolution Lynx Synthetic Aperture Radar (SAR). In their study, Tsunoda, et

  18. Large Scale Visual Recognition

    Science.gov (United States)

    2012-06-01

    Miniature pinscher Figure 2.5: Visualization of the mammal hierarchy. 23 900 1000 1100 elephant okapi panda platypus Caltech101 Lossless JPG size in...limousine taxi Flat Ours Golden Retriever dog Chihuahua dog Husky domes c animal canine English Se er hyena canine polar bear carnivore...snow leopard feline o er living thing conch en y wheelbarrow carnivore orangutan mammal meerkat mammal carnivore polar bear lynx lion Flat

  19. Trans-Boundary Edge Effects in the Western Carpathians: The Influence of Hunting on Large Carnivore Occupancy

    Science.gov (United States)

    Váňa, Martin; Suchomel, Josef; Chapron, Guillaume; López-Bao, José Vicente

    2016-01-01

    The conservation and management of wolves Canis lupus in the periphery of their distribution is challenging. Edges of wolf distribution are characterized by very few and intermittent occurrences of individuals, which are modulated by multiple factors affecting the overall population such as human-caused mortality, management targets and food availability. The knowledge of population dynamics in the edges becomes crucial when hunting takes place nearby the edges, which may preclude population expansion. Here, using as example the occurrence of wolves in the Beskydy Mountains (Czech-Slovak border), which are the edge distribution of the wolf and Eurasian lynx Lynx lynx populations in the West Carpathians, we explored how food availability and hunting in the Slovakian core area affected the dynamics of wolves in the edges of this population. During 2003–2012, we monitored large carnivore occurrence by snow-tracking surveys and tested potential differences in the occurrence of these species in Beskydy Mountains and potential mechanisms behind detected patterns. Despite the proximity to the core area, with several wolf reproductions being confirmed at least in recent years, the wolf was a very rare species in Beskydy and was recorded 14 times less often than the lynx. The expected abundance of wolves in the Beskydy Mountains was inversely related to prey availability in the Slovakian core area. Wolf hunting the year before influenced the expected abundance of wolves in Beskydy area. We discuss how different life histories and legal status of both species probably account for most of the observed difference of occurrence at range margins. PMID:28002475

  20. Trans-Boundary Edge Effects in the Western Carpathians: The Influence of Hunting on Large Carnivore Occupancy.

    Science.gov (United States)

    Kutal, Miroslav; Váňa, Martin; Suchomel, Josef; Chapron, Guillaume; López-Bao, José Vicente

    2016-01-01

    The conservation and management of wolves Canis lupus in the periphery of their distribution is challenging. Edges of wolf distribution are characterized by very few and intermittent occurrences of individuals, which are modulated by multiple factors affecting the overall population such as human-caused mortality, management targets and food availability. The knowledge of population dynamics in the edges becomes crucial when hunting takes place nearby the edges, which may preclude population expansion. Here, using as example the occurrence of wolves in the Beskydy Mountains (Czech-Slovak border), which are the edge distribution of the wolf and Eurasian lynx Lynx lynx populations in the West Carpathians, we explored how food availability and hunting in the Slovakian core area affected the dynamics of wolves in the edges of this population. During 2003-2012, we monitored large carnivore occurrence by snow-tracking surveys and tested potential differences in the occurrence of these species in Beskydy Mountains and potential mechanisms behind detected patterns. Despite the proximity to the core area, with several wolf reproductions being confirmed at least in recent years, the wolf was a very rare species in Beskydy and was recorded 14 times less often than the lynx. The expected abundance of wolves in the Beskydy Mountains was inversely related to prey availability in the Slovakian core area. Wolf hunting the year before influenced the expected abundance of wolves in Beskydy area. We discuss how different life histories and legal status of both species probably account for most of the observed difference of occurrence at range margins.

  1. Abundance and food habits of cougars and bobcats in the Sierra San Luis, Sonora, Mexico

    Science.gov (United States)

    Hugo Luna Soria; Carlos A. Lopez Gonzalez

    2005-01-01

    Cougars (Puma concolor) and bobcats (Lynx rufus) are present throughout the Sky Islands of the Sonoran desert. We determined the abundance and food habits in northeastern Sonora, Mexico. Abundance indicated that cougars were common (4.19±5.57 cougars/100 km2 and 0.05±0.05 scats/km). According to the scat index, bobcats were more...

  2. Real-time Linux operating system for plasma control on FTU--implementation advantages and first experimental results

    International Nuclear Information System (INIS)

    Vitale, V.; Centioli, C.; Iannone, F.; Mazza, G.; Panella, M.; Pangione, L.; Podda, S.; Zaccarian, L.

    2004-01-01

    In this paper, we report on the experiment carried out at the Frascati Tokamak Upgrade (FTU) on the porting of the plasma control system (PCS) from a LynxOS architecture to an open source Linux real-time architecture. The old LynxOS system was implemented on a VME/PPC604r embedded controller guaranteeing successful plasma position, density and current control. The new RTAI-Linux operating system has shown to easily adapt to the VME hardware via a VME/INTELx86 embedded controller. The advantages of the new solution versus the old one are not limited to the reduced cost of the new architecture (based on the open-source characteristic of the RTAI architecture) but also enhanced by the response time of the real-time system which, also through an optimization of the real-time code, has been reduced from 150 μs (LynxOS) to 70 μs (RTAI). The new real-time operating system is also shown to be suitable for new extended control activities, whose implementation is also possible based on the reduced duty cycle duration, which leaves space for the real-time implementation of nonlinear control laws. We report here on recent experiments related to the optimization of the coupling between additional radiofrequency power and plasma

  3. Emergence of canine distemper virus strains with modified molecular signature and enhanced neuronal tropism leading to high mortality in wild carnivores.

    Science.gov (United States)

    Origgi, F C; Plattet, P; Sattler, U; Robert, N; Casaubon, J; Mavrot, F; Pewsner, M; Wu, N; Giovannini, S; Oevermann, A; Stoffel, M H; Gaschen, V; Segner, H; Ryser-Degiorgis, M-P

    2012-11-01

    An ongoing canine distemper epidemic was first detected in Switzerland in the spring of 2009. Compared to previous local canine distemper outbreaks, it was characterized by unusually high morbidity and mortality, rapid spread over the country, and susceptibility of several wild carnivore species. Here, the authors describe the associated pathologic changes and phylogenetic and biological features of a multiple highly virulent canine distemper virus (CDV) strain detected in and/or isolated from red foxes (Vulpes vulpes), Eurasian badgers (Meles meles), stone (Martes foina) and pine (Martes martes) martens, from a Eurasian lynx (Lynx lynx), and a domestic dog. The main lesions included interstitial to bronchointerstitial pneumonia and meningopolioencephalitis, whereas demyelination--the classic presentation of CDV infection--was observed in few cases only. In the brain lesions, viral inclusions were mainly in the nuclei of the neurons. Some significant differences in brain and lung lesions were observed between foxes and mustelids. Swiss CDV isolates shared together with a Hungarian CDV strain detected in 2004. In vitro analysis of the hemagglutinin protein from one of the Swiss CDV strains revealed functional and structural differences from that of the reference strain A75/17, with the Swiss strain showing increased surface expression and binding efficiency to the signaling lymphocyte activation molecule (SLAM). These features might be part of a novel molecular signature, which might have contributed to an increase in virus pathogenicity, partially explaining the high morbidity and mortality, the rapid spread, and the large host spectrum observed in this outbreak.

  4. Sarcoptic mange in Swedish wildlife.

    Science.gov (United States)

    Mörner, T

    1992-12-01

    Mange caused by Sarcoptes scabiei var. vulpes appeared among red foxes (Vulpes vulpes) in Scandinavia (south-west Finland) for the first time in this century in 1967. The disease was most probably introduced by foxes crossing the Gulf of Finland from Estonia. The mange epizootic spread northwards through Finland and reached Sweden in late 1975, when mangy foxes appeared in the northern part of the country. In 1984, mange was observed in most parts of Sweden. The disease was observed to spread rapidly in boreal areas, whereas it spread more slowly in agricultural areas. Mortality due to mange was very high. The duration of the disease before death due to emaciation has been shown experimentally to be over 90 days. An outbreak of fox mange among Arctic foxes (Alopex lagopus) occurred in 1986. The local population of Arctic foxes was caught and successfully treated. The following year, treated foxes were caught again and no signs of disease were found. Sporadic cases of fox mange have also been diagnosed in lynx (Lynx lynx), pine marten (Martes martes) and domestic dogs. Single cases have been observed in other species: wolf (Canis lupus), mountain hare (Lepus timidus), domestic cat and horse. No cases of sarcoptic mange have been recorded in the badger (Meles meles). At present, although fox mange occurs as an epizootic in local populations, the number of foxes has increased again in many parts of Sweden.

  5. Disease-mediated bottom-up regulation: An emergent virus affects a keystone prey, and alters the dynamics of trophic webs.

    Science.gov (United States)

    Monterroso, Pedro; Garrote, Germán; Serronha, Ana; Santos, Emídio; Delibes-Mateos, Miguel; Abrantes, Joana; Perez de Ayala, Ramón; Silvestre, Fernando; Carvalho, João; Vasco, Inês; Lopes, Ana M; Maio, Elisa; Magalhães, Maria J; Mills, L Scott; Esteves, Pedro J; Simón, Miguel Ángel; Alves, Paulo C

    2016-10-31

    Emergent diseases may alter the structure and functioning of ecosystems by creating new biotic interactions and modifying existing ones, producing cascading processes along trophic webs. Recently, a new variant of the rabbit haemorrhagic disease virus (RHDV2 or RHDVb) arguably caused widespread declines in a keystone prey in Mediterranean ecosystems - the European rabbit (Oryctolagus cuniculus). We quantitatively assess the impact of RHDV2 on natural rabbit populations and in two endangered apex predator populations: the Iberian lynx (Lynx pardinus) and the Spanish Imperial eagle (Aquila adalberti). We found 60-70% declines in rabbit populations, followed by decreases of 65.7% in Iberian lynx and 45.5% in Spanish Imperial eagle fecundities. A revision of the web of trophic interactions among rabbits and their dependent predators suggests that RHDV2 acts as a keystone species, and may steer Mediterranean ecosystems to management-dependent alternative states, dominated by simplified mesopredator communities. This model system stresses the importance of diseases as functional players in the dynamics of trophic webs.

  6. Mega starbirth cluster is biggest, brightest and hottest ever seen

    Science.gov (United States)

    2003-10-01

    Artist’s impression of the Lynx Arc hi-res Size hi-res: 4519 kb Credits: European Space Agency, NASA and Robert A.E. Fosbury (European Space Agency/Space Telescope-European Coordinating Facility, Germany) Artist’s impression of the Lynx Arc This illustration shows an artist’s impression of the so-called Lynx arc, a newly identified distant super-cluster that contains a million blue-white stars twice as hot as similar stars in our Milky Way galaxy. The Lynx arc is one million times brighter than the well-known Orion Nebula, a nearby prototypical ‘starbirth’ region visible with small telescopes. The stars in the Lynx arc are more than twice as hot as the Orion Nebula’s central stars, with surface temperatures up to 80 000°C. Though there are much bigger and brighter star-forming regions than the Orion Nebula in our local Universe, none are as bright as the Lynx arc, nor do they contain such large numbers of hot stars. The stars are so hot that a very large fraction of their light is emitted in the ultraviolet that makes the gas glow with the green and red colours illustrated here. The so-called Lynx Arc is one million times brighter than the well-known Orion Nebula, a nearby prototypical 'starbirth' region visible with small telescopes. The newly identified super-cluster contains a million blue-white stars that are twice as hot as similar stars in our Milky Way galaxy. It is a rarely glimpsed example of the early days of the Universe where furious firestorms of starbirth blazed across the skies. The spectacular cluster's opulence is dimmed when seen from Earth only by the fact that it is 12 000 million light years away. The discovery of this unique and tantalising object was the result of a systematic study of distant clusters of galaxies carried out with major X-ray, optical and infrared telescopes, including the NASA/ESA Hubble Space Telescope, ROSAT and the Keck Telescopes. Bob Fosbury, of the European Space Agency's Space Telescope

  7. Real-time Linux operating system for plasma control on FTU--implementation advantages and first experimental results

    Energy Technology Data Exchange (ETDEWEB)

    Vitale, V. E-mail: vitale@frascati.enea.it; Centioli, C.; Iannone, F.; Mazza, G.; Panella, M.; Pangione, L.; Podda, S.; Zaccarian, L

    2004-06-01

    In this paper, we report on the experiment carried out at the Frascati Tokamak Upgrade (FTU) on the porting of the plasma control system (PCS) from a LynxOS architecture to an open source Linux real-time architecture. The old LynxOS system was implemented on a VME/PPC604r embedded controller guaranteeing successful plasma position, density and current control. The new RTAI-Linux operating system has shown to easily adapt to the VME hardware via a VME/INTELx86 embedded controller. The advantages of the new solution versus the old one are not limited to the reduced cost of the new architecture (based on the open-source characteristic of the RTAI architecture) but also enhanced by the response time of the real-time system which, also through an optimization of the real-time code, has been reduced from 150 {mu}s (LynxOS) to 70 {mu}s (RTAI). The new real-time operating system is also shown to be suitable for new extended control activities, whose implementation is also possible based on the reduced duty cycle duration, which leaves space for the real-time implementation of nonlinear control laws. We report here on recent experiments related to the optimization of the coupling between additional radiofrequency power and plasma.

  8. A High Resolution, Light-Weight, Synthetic Aperture Radar for UAV Application

    International Nuclear Information System (INIS)

    Doerry, A.W.; Hensley, W.H.; Stence, J.; Tsunoda, S.I.; Pace, F.; Walker, B.C.; Woodring, M.

    1999-06-01

    (U) Sandia National Laboratories in collaboration with General Atomics (GA) has designed and built a high resolution, light-weight, Ku-band Synthetic Aperture Radar (SAR) known as ''Lynx''. Although Lynx can be operated on a wide variety of manned and unmanned platforms, its design is optimized for use on medium altitude Unmanned Aerial Vehicles (UAVS). In particular, it can be operated on the Predator, I-GNAT, and Prowler II platforms manufactured by GA. (U) The radar production weight is less than 120 lb and operates within a 3 GHz band from 15.2 GHz to 18.2 GHz with a peak output power of 320 W. Operating range is resolution and mode dependent but can exceed 45 km in adverse weather (4 mm/hr rain). Lynx has operator selectable resolution and is capable of 0.1 m resolution in spotlight mode and 0.3 m resolution in strip map mode, over substantial depression angles (5 to 60 deg) and squint angles (broadside and ±45 deg). Real-time Motion Compensation is implemented to allow high-quality image formation even during vehicle turns and other maneuvers

  9. Comparative Metagenomics of Cellulose- and Poplar Hydrolysate-Degrading Microcosms from Gut Microflora of the Canadian Beaver (Castor canadensis and North American Moose (Alces americanus after Long-Term Enrichment

    Directory of Open Access Journals (Sweden)

    Mabel T. Wong

    2017-12-01

    Full Text Available To identify carbohydrate-active enzymes (CAZymes that might be particularly relevant for wood fiber processing, we performed a comparative metagenomic analysis of digestive systems from Canadian beaver (Castor canadensis and North American moose (Alces americanus following 3 years of enrichment on either microcrystalline cellulose or poplar hydrolysate. In total, 9,386 genes encoding CAZymes and carbohydrate-binding modules (CBMs were identified, with up to half predicted to originate from Firmicutes, Bacteroidetes, Chloroflexi, and Proteobacteria phyla, and up to 17% from unknown phyla. Both PCA and hierarchical cluster analysis distinguished the annotated glycoside hydrolase (GH distributions identified herein, from those previously reported for grass-feeding mammals and herbivorous foragers. The CAZyme profile of moose rumen enrichments also differed from a recently reported moose rumen metagenome, most notably by the absence of GH13-appended dockerins. Consistent with substrate-driven convergence, CAZyme profiles from both poplar hydrolysate-fed cultures differed from cellulose-fed cultures, most notably by increased numbers of unique sequences belonging to families GH3, GH5, GH43, GH53, and CE1. Moreover, pairwise comparisons of moose rumen enrichments further revealed higher counts of GH127 and CE15 families in cultures fed with poplar hydrolysate. To expand our scope to lesser known carbohydrate-active proteins, we identified and compared multi-domain proteins comprising both a CBM and domain of unknown function (DUF as well as proteins with unknown function within the 416 predicted polysaccharide utilization loci (PULs. Interestingly, DUF362, identified in iron–sulfur proteins, was consistently appended to CBM9; on the other hand, proteins with unknown function from PULs shared little identity unless from identical PULs. Overall, this study sheds new light on the lignocellulose degrading capabilities of microbes originating from

  10. Weather and Prey Predict Mammals' Visitation to Water.

    Directory of Open Access Journals (Sweden)

    Grant Harris

    Full Text Available Throughout many arid lands of Africa, Australia and the United States, wildlife agencies provide water year-round for increasing game populations and enhancing biodiversity, despite concerns that water provisioning may favor species more dependent on water, increase predation, and reduce biodiversity. In part, understanding the effects of water provisioning requires identifying why and when animals visit water. Employing this information, by matching water provisioning with use by target species, could assist wildlife management objectives while mitigating unintended consequences of year-round watering regimes. Therefore, we examined if weather variables (maximum temperature, relative humidity [RH], vapor pressure deficit [VPD], long and short-term precipitation and predator-prey relationships (i.e., prey presence predicted water visitation by 9 mammals. We modeled visitation as recorded by trail cameras at Sevilleta National Wildlife Refuge, New Mexico, USA (June 2009 to September 2014 using generalized linear modeling. For 3 native ungulates, elk (Cervus Canadensis, mule deer (Odocoileus hemionus, and pronghorn (Antilocapra americana, less long-term precipitation and higher maximum temperatures increased visitation, including RH for mule deer. Less long-term precipitation and higher VPD increased oryx (Oryx gazella and desert cottontail rabbits (Sylvilagus audubonii visitation. Long-term precipitation, with RH or VPD, predicted visitation for black-tailed jackrabbits (Lepus californicus. Standardized model coefficients demonstrated that the amount of long-term precipitation influenced herbivore visitation most. Weather (especially maximum temperature and prey (cottontails and jackrabbits predicted bobcat (Lynx rufus visitation. Mule deer visitation had the largest influence on coyote (Canis latrans visitation. Puma (Puma concolor visitation was solely predicted by prey visitation (elk, mule deer, oryx. Most ungulate visitation peaked during

  11. Weather and Prey Predict Mammals’ Visitation to Water

    Science.gov (United States)

    Harris, Grant; Sanderson, James G.; Erz, Jon; Lehnen, Sarah E.; Butler, Matthew J.

    2015-01-01

    Throughout many arid lands of Africa, Australia and the United States, wildlife agencies provide water year-round for increasing game populations and enhancing biodiversity, despite concerns that water provisioning may favor species more dependent on water, increase predation, and reduce biodiversity. In part, understanding the effects of water provisioning requires identifying why and when animals visit water. Employing this information, by matching water provisioning with use by target species, could assist wildlife management objectives while mitigating unintended consequences of year-round watering regimes. Therefore, we examined if weather variables (maximum temperature, relative humidity [RH], vapor pressure deficit [VPD], long and short-term precipitation) and predator-prey relationships (i.e., prey presence) predicted water visitation by 9 mammals. We modeled visitation as recorded by trail cameras at Sevilleta National Wildlife Refuge, New Mexico, USA (June 2009 to September 2014) using generalized linear modeling. For 3 native ungulates, elk (Cervus Canadensis), mule deer (Odocoileus hemionus), and pronghorn (Antilocapra americana), less long-term precipitation and higher maximum temperatures increased visitation, including RH for mule deer. Less long-term precipitation and higher VPD increased oryx (Oryx gazella) and desert cottontail rabbits (Sylvilagus audubonii) visitation. Long-term precipitation, with RH or VPD, predicted visitation for black-tailed jackrabbits (Lepus californicus). Standardized model coefficients demonstrated that the amount of long-term precipitation influenced herbivore visitation most. Weather (especially maximum temperature) and prey (cottontails and jackrabbits) predicted bobcat (Lynx rufus) visitation. Mule deer visitation had the largest influence on coyote (Canis latrans) visitation. Puma (Puma concolor) visitation was solely predicted by prey visitation (elk, mule deer, oryx). Most ungulate visitation peaked during May and

  12. Quelques conséquences de l'introduction de deux espèces de macrophytes, Elodea canadensis Michaux et Elodea nuttallii St. John, dans les écosystèmes aquatiques continentaux : exemple de la plaine d'Alsace et des Vosges du Nord (Nord-Est de la France

    Directory of Open Access Journals (Sweden)

    THIEBAUT G.

    1997-01-01

    Full Text Available L'introduction au XIXème et XXème siècle, de deux espèces d'élodées Elodea canadensis Michaux et Elodea nuttallii St. John, dans les cours d'eau du nord-est de la France, a induit des modifications dans la composition floristique et le fonctionnement des écosystèmes aquatiques. L'analyse comparative de la distribution géographique de ces deux hydrophytes dans les eaux calcaires (plaine d'Alsace et acides (Vosges du Nord a permis de préciser leur écologie. Après des phases successives d'expansion des deux espèces, celles-ci se sont intégrées dans les phytocénoses aquatiques. L'introduction dans les écosystèmes aquatiques d'Elodea canadensis et d'E. nuttallii a induit des phénomènes de compétition interspécifique, en faveur essentiellement d'Elodea nuttallii. Cette dernière apparaît comme l'espèce la plus compétitive dans les cours d'eau eutrophes de la plaine d'Alsace (aptitude à accumuler le phosphore, sensibilité moindre à l'azote ammoniacal. Les élodées peuvent réaliser une épuration biologique, mais provoquent, lors de leur décomposition, une eutrophisation secondaire des eaux en absence de faucardage.

  13. The Atsa Suborbital Observatory: An Observatory for a Commercial Suborbital Spacecraft

    Science.gov (United States)

    Vilas, F.; Sollitt, L. S.

    2012-12-01

    instruments or user-provided instruments. Rapid turnaround will depend only on flight frequency. Data are stored on-board for retrieval when the spacecraft lands. We provide robust instrumentation that can survive suborbital spaceflight, assessment of the feasibility of the requested observations, rigorous scripting of the telescope operation, integration of the telescope plus instrument in a provider spacecraft, and periodic preventive maintenance for the telescope and instrument suite. XCOR Aerospace's Lynx III spacecraft is the best candidate vehicle to host a suborbital astronomical observatory. Unlike other similar vehicles, the Lynx will operate with only 1 or 2 people onboard (the pilot and an operator), allowing for each mission to be totally dedicated to the observation (no tourists will be bumping about; no other experiments will affect spacecraft pointing). A stable platform, the Lynx can point to an accuracy of ± 0.5o. Fine pointing is done by the telescope system. Best of all, the Lynx has a dorsal pod that opens directly to space. For astronomical observations, the best window is NO window. Currently, we plan to deploy a 20" diameter telescope in the Lynx III dorsal pod. XCOR Aerospace has the goal of eventually maintaining a Lynx flight frequency capability of 4 times/day. As with any observatory, Atsa will be available for observations by the community at large.

  14. Daily activity patterns of large and medium-sized mammals based on camera traps data in the Central Forest Nature Reserve, Valdai Upland, Russia

    Directory of Open Access Journals (Sweden)

    Sergey S. Ogurtsov

    2018-06-01

    Full Text Available Here are presented the results of the analysis of daily activity patterns obtained from the data of camera traps for five large mammals (elk Alces alces, wild boar Sus scrofa, brown bear Ursus arctos, grey wolf Canis lupus, Eurasian lynx Lynx lynx and three medium ones (European badger Meles meles, raccoon dog Nyctereutes procyonoides, mountain hare Lepus timidus for the territory of the Central Forest Nature Reserve, Valdai Upland, Russia. Data were collected in the period 2010–2017 and the trap effort was 30 158 camera days from 21 locations. Most of the mammals surveyed showed activity at night and twilight hours (71% of the pictures. The hare was most active among all and dominant at night. In many respects it is similar to the activity of a raccoon dog, which type can be defined as nocturnal too. Unlike a hare, a raccoon dog has a weak peak in the daytime and less activity in the night. Badgers movements are confined to the twilight and nighttime. The share of nocturnal activity of large ungulates such as elk and wild boar was approximately the same and amounted to about 45% of all registrations. The wild boar is slightly more active during the day and in the evening and is not active at all in the morning. The elk is active in the morning, and in the daytime and to a lesser extent in the evening. The lynx and the bear have similar cathemeral activity patterns: almost half of all their meetings occurred at daylight hours and only slightly – less than 40% – at night. The brown bear had the maximum number of registrations in the daytime among all the studied species. Despite the fact that the main object of lynx feeding in the reserve is the hare, there was no high degree of overlap between them (γˆ = 0.75. In the group of large carnivores, the wolf was noticeably distinguished, more than half of its registrations were at night, and a third – on daytime. Daily activities of the wolf and its main prey elk showed a large overlap (

  15. Game statistics for the island of Olkiluoto in 2013-2014

    Energy Technology Data Exchange (ETDEWEB)

    Niemi, M.; Nieminen, M. [Faunatica Oy, Espoo (Finland)

    2015-05-15

    The game statistics for the island of Olkiluoto were updated in the summer 2014 and compared with earlier statistics. In addition, the estimated biomass of hunted animals was calculated. The reported game bag and population size estimates are based on the annual action report of local hunting club (Olkiluodon Metsaestysseura ry) and interviews of hunting club's secretary. No moose or deer inventories were made in the winter 2013-2014. The moose population has been a slightly increasing when comparing the previous year; there were 4-6 individuals on the island after hunting season. The number of moose varies because they tend to move between the island and mainland. Winter 2013-2014 was relatively easy for white-tailed deer and roe deer but the predation caused by lynxes inhibits the increase of populations. However, the current amount of lynxes on the island is unknown because the lack of snow in the winter 2013-2014. In the summer of 2014, there were several lynx observations. The number of hunted raccoon dogs was almost four times as large as in the previous year; altogether 26 individuals were killed. There were no noticeable changes in the number of other hunted small or medium-sized predators. American minks were not killed at all. The total number of hunted hares decreased from eleven to seven. Once again, mallard was the most common hunted bird species followed by hooded crow. Other bird species hunted were wood pigeon, herring gull, hazel grouse, wigeon, teal and common pochard. The total biomass hunted was approximately 1 225 kilos (1 170 for mammals and 55 for birds) which was 305 kilos more than in the previous year. The biomass destined to human consumption (i.e. game meat) was approximately 415 kilos (400 kilos for mammals, 15 for birds). (orig.)

  16. Dietary items as possible sources of {sup 137}Cs in large carnivores in the Gorski Kotar forest ecosystem, Western Croatia

    Energy Technology Data Exchange (ETDEWEB)

    Šprem, Nikica, E-mail: nsprem@agr.hr [University of Zagreb, Faculty of Agriculture, Department of Fisheries, Beekeeping, Game Management and Special Zoology, Svetošimunska cesta 25, 10000 Zagreb (Croatia); Piria, Marina; Barišić, Domagoj [University of Zagreb, Faculty of Agriculture, Department of Fisheries, Beekeeping, Game Management and Special Zoology, Svetošimunska cesta 25, 10000 Zagreb (Croatia); Kusak, Josip [University of Zagreb, Veterinary Faculty, Department of Biology, Heinzelova 55, 10000 Zagreb (Croatia); Barišić, Delko [Laboratory for Radioecology, Centre for Marine and Environmental Research, Ruđer Bošković Institute, PO Box 160, Bijenička 54, 10002 Zagreb (Croatia)

    2016-01-15

    The mountain forest ecosystem of Gorski Kotar is distant from any significant sources of environmental pollution, though recent findings have revealed that this region is among the most intense {sup 137}Cs contaminated area in Croatia. Therefore, the aim of this study was to investigate {sup 137}Cs and {sup 40}K load in three large predator species in the mountain forest ecosystem. Radionuclides mass activities were determined by the gamma-spectrometric method in the muscle tissue of brown bear (47), wolf (7), lynx (1) and golden jackal (2). The highest {sup 137}Cs mass activity was found in lynx (153 Bq kg{sup −1}), followed by brown bear (132 Bq kg{sup −1}), wolf (22.2 Bq kg{sup −1}), and golden jackal (2.48 Bq kg{sup −1}). Analysis of 63 samples of dietary items suggests that they are not all potentially dominant sources of {sup 137}Cs for wildlife. The most important source of radionuclides for the higher parts of the food-chain from the study area were found to be the mushroom species wood hedgehog (Hydnum repandum), with a transfer factor TF of 5.166, and blueberry (Vaccinium myrtillus) as a plant species (TF = 2.096). Food items of animal origin indicated higher mass activity of radionuclides and therefore are possible moderate bioindicators of environmental pollution. The results also revealed that possible unknown wild animal food sources are a caesium source in the study region, and further study is required to illuminate this issue. - Highlights: • Radionuclide mass activities were determined by the gamma-spectrometric method. • The highest {sup 137}Cs mass activity in brown bear was 132, wolf 22.2 and lynx 153 Bq kg{sup −1}. • The best bioindicators are a wood hedgehog (TF = 5.166) and blueberry (TF = 2.096).

  17. PAnalyzer: A software tool for protein inference in shotgun proteomics

    Directory of Open Access Journals (Sweden)

    Prieto Gorka

    2012-11-01

    Full Text Available Abstract Background Protein inference from peptide identifications in shotgun proteomics must deal with ambiguities that arise due to the presence of peptides shared between different proteins, which is common in higher eukaryotes. Recently data independent acquisition (DIA approaches have emerged as an alternative to the traditional data dependent acquisition (DDA in shotgun proteomics experiments. MSE is the term used to name one of the DIA approaches used in QTOF instruments. MSE data require specialized software to process acquired spectra and to perform peptide and protein identifications. However the software available at the moment does not group the identified proteins in a transparent way by taking into account peptide evidence categories. Furthermore the inspection, comparison and report of the obtained results require tedious manual intervention. Here we report a software tool to address these limitations for MSE data. Results In this paper we present PAnalyzer, a software tool focused on the protein inference process of shotgun proteomics. Our approach considers all the identified proteins and groups them when necessary indicating their confidence using different evidence categories. PAnalyzer can read protein identification files in the XML output format of the ProteinLynx Global Server (PLGS software provided by Waters Corporation for their MSE data, and also in the mzIdentML format recently standardized by HUPO-PSI. Multiple files can also be read simultaneously and are considered as technical replicates. Results are saved to CSV, HTML and mzIdentML (in the case of a single mzIdentML input file files. An MSE analysis of a real sample is presented to compare the results of PAnalyzer and ProteinLynx Global Server. Conclusions We present a software tool to deal with the ambiguities that arise in the protein inference process. Key contributions are support for MSE data analysis by ProteinLynx Global Server and technical replicates

  18. Dietary items as possible sources of "1"3"7Cs in large carnivores in the Gorski Kotar forest ecosystem, Western Croatia

    International Nuclear Information System (INIS)

    Šprem, Nikica; Piria, Marina; Barišić, Domagoj; Kusak, Josip; Barišić, Delko

    2016-01-01

    The mountain forest ecosystem of Gorski Kotar is distant from any significant sources of environmental pollution, though recent findings have revealed that this region is among the most intense "1"3"7Cs contaminated area in Croatia. Therefore, the aim of this study was to investigate "1"3"7Cs and "4"0K load in three large predator species in the mountain forest ecosystem. Radionuclides mass activities were determined by the gamma-spectrometric method in the muscle tissue of brown bear (47), wolf (7), lynx (1) and golden jackal (2). The highest "1"3"7Cs mass activity was found in lynx (153 Bq kg"−"1), followed by brown bear (132 Bq kg"−"1), wolf (22.2 Bq kg"−"1), and golden jackal (2.48 Bq kg"−"1). Analysis of 63 samples of dietary items suggests that they are not all potentially dominant sources of "1"3"7Cs for wildlife. The most important source of radionuclides for the higher parts of the food-chain from the study area were found to be the mushroom species wood hedgehog (Hydnum repandum), with a transfer factor TF of 5.166, and blueberry (Vaccinium myrtillus) as a plant species (TF = 2.096). Food items of animal origin indicated higher mass activity of radionuclides and therefore are possible moderate bioindicators of environmental pollution. The results also revealed that possible unknown wild animal food sources are a caesium source in the study region, and further study is required to illuminate this issue. - Highlights: • Radionuclide mass activities were determined by the gamma-spectrometric method. • The highest "1"3"7Cs mass activity in brown bear was 132, wolf 22.2 and lynx 153 Bq kg"−"1. • The best bioindicators are a wood hedgehog (TF = 5.166) and blueberry (TF = 2.096).

  19. Game statistics for the island of Olkiluoto in 2013-2014

    International Nuclear Information System (INIS)

    Niemi, M.; Nieminen, M.

    2015-05-01

    The game statistics for the island of Olkiluoto were updated in the summer 2014 and compared with earlier statistics. In addition, the estimated biomass of hunted animals was calculated. The reported game bag and population size estimates are based on the annual action report of local hunting club (Olkiluodon Metsaestysseura ry) and interviews of hunting club's secretary. No moose or deer inventories were made in the winter 2013-2014. The moose population has been a slightly increasing when comparing the previous year; there were 4-6 individuals on the island after hunting season. The number of moose varies because they tend to move between the island and mainland. Winter 2013-2014 was relatively easy for white-tailed deer and roe deer but the predation caused by lynxes inhibits the increase of populations. However, the current amount of lynxes on the island is unknown because the lack of snow in the winter 2013-2014. In the summer of 2014, there were several lynx observations. The number of hunted raccoon dogs was almost four times as large as in the previous year; altogether 26 individuals were killed. There were no noticeable changes in the number of other hunted small or medium-sized predators. American minks were not killed at all. The total number of hunted hares decreased from eleven to seven. Once again, mallard was the most common hunted bird species followed by hooded crow. Other bird species hunted were wood pigeon, herring gull, hazel grouse, wigeon, teal and common pochard. The total biomass hunted was approximately 1 225 kilos (1 170 for mammals and 55 for birds) which was 305 kilos more than in the previous year. The biomass destined to human consumption (i.e. game meat) was approximately 415 kilos (400 kilos for mammals, 15 for birds). (orig.)

  20. Quantification of the humoral immune response and hemoplasma blood and tissue loads in cats coinfected with 'Candidatus Mycoplasma haemominutum' and feline leukemia virus.

    Science.gov (United States)

    Wolf-Jäckel, Godelind A; Cattori, Valentino; Geret, Catrina P; Novacco, Marilisa; Meli, Marina L; Riond, Barbara; Boretti, Felicitas S; Lutz, Hans; Hofmann-Lehmann, Regina

    2012-08-01

    'Candidatus Mycoplasma haemominutum' (CMhm) is a hemotropic mycoplasma (aka hemoplasma) of domestic cats and wild felids. In a transmission study, we exposed eight specified pathogen-free cats to blood from Iberian lynxes (Lynx pardinus) infected with CMhm. The cats were coinfected with feline leukemia virus (FeLV) from an Iberian lynx or with a prototype FeLV. The goal of the present study was to quantify the humoral immune response to CMhm and to identify potential target tissues and sequestration sites. Antibodies were measured by a recombinant antigen-based enzyme-linked immunosorbent assay, and blood and tissue loads were quantified using real-time PCR. Seven out of eight cats became CMhm-infected; all of these cats seroconverted between 3 and 13 weeks after inoculation. Antibody levels correlated with the CMhm blood loads. The peak CMhm blood loads were inversely correlated with the incubation period. PCR-positive results were found in all 24 tissues tested but not for all samples. Although all tissues were PCR-positive in one cat euthanized ten weeks after infection, many tissues tested negative in six cats euthanized at week 20 after infection. In several cats, the spleen, lung, liver, heart and aorta contained more copies than expected given the tissue's blood supply, but most tissues contained fewer copies than expected. In conclusion, this is the first study to quantify the humoral immune response and tissue loads in CMhm-FeLV-coinfected cats. The tissue loads appeared to correlate with the duration of infection and with the blood loads, but no evidence of significant CMhm tissue sequestration was found. Copyright © 2012 Elsevier Ltd. All rights reserved.

  1. Carnivore-caused livestock mortality in Trans-Himalaya.

    Science.gov (United States)

    Namgail, Tsewang; Fox, Joseph L; Bhatnagar, Yash Veer

    2007-04-01

    The loss of livestock to wild predators is an important livelihood concern among Trans-Himalayan pastoralists. Because of the remoteness and inaccessibility of the region, few studies have been carried out to quantify livestock depredation by wild predators. In the present study, we assessed the intensity of livestock depredation by snow leopard Uncia uncia, Tibetan wolf Canis lupus chanku, and Eurasian lynx Lynx l. isabellina in three villages, namely Gya, Rumtse, and Sasoma, within the proposed Gya-Miru Wildlife Sanctuary in Ladakh, India. The three villages reported losses of 295 animals to these carnivores during a period of 2.5 years ending in early 2003, which represents an annual loss rate of 2.9% of their livestock holdings. The Tibetan wolf was the most important predator, accounting for 60% of the total livestock loss because of predation, followed by snow leopard (38%) and lynx (2%). Domestic goat was the major victim (32%), followed by sheep (30%), yak (15%), and horse (13%). Wolves killed horses significantly more and goats less than would be expected from their relative abundance. Snow leopards also killed horses significantly more than expected, whereas they killed other livestock types in proportion to their abundance. The three villages combined incurred an estimated annual monetary loss of approximately $USD 12,120 amounting to approximately $USD 190/household/y. This relatively high total annual loss occurred primarily because of depredation of the most valuable livestock types such as yak and horse. Conservation actions should initially attempt to target decrease of predation on these large and valuable livestock species.

  2. Prostate stem cell antigen interacts with nicotinic acetylcholine receptors and is affected in Alzheimer's disease

    DEFF Research Database (Denmark)

    Jensen, Majbrit Myrup; Mikkelsen, Jens D.; Arvaniti, Maria

    2015-01-01

    Alzheimer's disease (AD) is a neurodegenerative disorder involving impaired cholinergic neurotransmission and dysregulation of nicotinic acetylcholine receptors (nAChRs). Ly-6/neurotoxin (Lynx) proteins have been shown to modulate cognition and neural plasticity by binding to nAChR subtypes...... are present in the human brain. We further showed that PSCA forms stable complexes with the α4 nAChR subunit and decreases nicotine-induced extracellular-signal regulated kinase phosphorylation in PC12 cells. In addition, we analyzed protein levels of PSCA and Lypd6 in postmortem tissue of medial frontal...

  3. Primeros registros de 4 especies de felinos en el sur de Puebla, México

    OpenAIRE

    Farías, Verónica; Téllez, Oswaldo; Botello, Francisco; Hernández, Omar; Berruecos, Jessica; Olivares, Saúl J.; Hernández, Julio C.

    2015-01-01

    Se presentan los primeros registros de margay (Leopardus wiedii), gato montés (Lynx rufus), puma (Puma concolor) y jaguarundi (Puma yagouaroundi) en el sur del estado de Puebla. El trabajo de campo fue parte de una monitorización participativa que incluyó a las autoridades civiles del ejido. Se colocaron 11 estaciones de cámaras-trampa digitales que funcionaron del 18 de diciembre de 2012 al 18 de febrero de 2014. Con un esfuerzo de muestreo de 2,669 días-trampa y dentro del conjunto de regis...

  4. The FINUDA data acquisition system

    International Nuclear Information System (INIS)

    Cerello, P.; Marcello, S.; Filippini, V.; Fiore, L.; Gianotti, P.; Raimondo, A.

    1996-07-01

    A parallel scalable Data Acquisition System, based on VME, has been developed to be used in the FINUDA experiment, scheduled to run at the DAPHNE machine at Frascati starting from 1997. The acquisition software runs on embedded RTPC 8067 processors using the LynxOS operating system. The readout of event fragments is coordinated by a suitable trigger Supervisor. data read by different controllers are transported via dedicated bus to a Global Event Builder running on a UNIX machine. Commands from and to VME processors are sent via socket based network protocols. The network hardware is presently ethernet, but it can easily changed to optical fiber

  5. The new generation of PowerPC VMEbus front end computers for the CERN SPS and LEP accelerators control system

    OpenAIRE

    Van den Eynden, M

    1995-01-01

    The CERN SPS and LEP PowerPC project is aimed at introducing a new generation of PowerPC VMEbus processor modules running the LynxOS real-time operating system. This new generation of front end computers using the state-of-the-art microprocessor technology will first replace the obsolete Xenix PC based systems (about 140 installations) successfully used since 1988 to control the LEP accelerator. The major issues addressed in the scope of this large scale project are the technical specificatio...

  6. The new generation of PowerPC VMEbus front end computers for the CERN SPS and LEP accelerators system

    OpenAIRE

    Charrue, P; Bland, A; Ghinet, F; Ribeiro, P

    1995-01-01

    The CERN SPS and LEP PowerPC project is aimed at introducing a new generation of PowerPC VMEbus processor modules running the LynxOS real-time operating system. This new generation of front end computers using the state-of-the-art microprocessor technology will first replace the obsolete XENIX PC based systems (about 140 installations) successfully used since 1988 to control the LEP accelerator. The major issues addressed in the scope of this large scale project are the technical specificatio...

  7. Beginning Ubuntu Linux

    CERN Document Server

    Raggi, Emilio; Channelle, Andy; Parsons, Trevor; Van Vugt, Sander

    2010-01-01

    Ubuntu Linux is the fastest growing Linux-based operating system, and Beginning Ubuntu Linux, Fifth Edition teaches all of us - including those who have never used Linux - how to use it productively, whether you come from Windows or the Mac or the world of open source. Beginning Ubuntu Linux, Fifth Edition shows you how to take advantage of the newest Ubuntu release, Lucid Lynx. Based on the best-selling previous edition, Emilio Raggi maintains a fine balance between teaching Ubuntu and introducing new features. Whether you aim to use it in the home or in the office, you'll be introduced to th

  8. Ecotourism Destinations in Romania

    Directory of Open Access Journals (Sweden)

    Iuliana Ioana Merce

    2014-05-01

    Full Text Available Romania has about 800 protected areas, which now covers about 5% of the country. Most ecotourism destinations are located within or adjacent to these protected areas such as Danube Delta Biosphere Reserve, northern communities National Park, Yosemite National Park, Apuseni Natural Park. In Romania there are still non-fragmented forest, and over a third of the population of bears, wolves and lynx in Europe, unique paradise of birds in the Danube Delta, more than 12 000 caves and, not least, full of authentic local traditions. Ecotourism allows recovery and conservation of the country's natural capital.

  9. First Student Project at the University of Tennessee at Martin Observatory

    Science.gov (United States)

    Crews, Lionel J.; Turner, K.; Wesner, P.

    2011-05-01

    The University of Tennessee at Martin has recently completed the construction and setup of an observatory. The dome houses a 16" Meade telescope with SBIG STL-11000M CCD. For its first project, observations of the Delta Scuti type variable SZ Lynx were taken in March and analyzed using MiraPRO. A simple ephemeris calculation was done, and compared to previous results. This project was done under the University Scholars program, a four year scholarship program which includes a faculty-mentored research project.

  10. Evaluating the operations capability of Freedom's Data Management System

    Science.gov (United States)

    Sowizral, Henry A.

    1990-01-01

    Three areas of Data Management System (DMS) performance are examined: raw processor speed, the subjective speed of the Lynx OS X-Window system, and the operational capacity of the Runtime Object Database (RODB). It is concluded that the proposed processor will operate at its specified rate of speed and that the X-Window system operates within users' subjective needs. It is also concluded that the RODB cannot provide the required level of service, even with a two-order of magnitude (100 fold) improvement in speed.

  11. VMEbus based computer and real-time UNIX as infrastructure of DAQ

    International Nuclear Information System (INIS)

    Yasu, Y.; Fujii, H.; Nomachi, M.; Kodama, H.; Inoue, E.; Tajima, Y.; Takeuchi, Y.; Shimizu, Y.

    1994-01-01

    This paper describes what the authors have constructed as the infrastructure of data acquisition system (DAQ). The paper reports recent developments concerned with HP VME board computer with LynxOS (HP742rt/HP-RT) and Alpha/OSF1 with VMEbus adapter. The paper also reports current status of developing a Benchmark Suite for Data Acquisition (DAQBENCH) for measuring not only the performance of VME/CAMAC access but also that of the context switching, the inter-process communications and so on, for various computers including Workstation-based systems and VME board computers

  12. Key role of European rabbits in the conservation of the Western Mediterranean basin hotspot.

    Science.gov (United States)

    Delibes-Mateos, Miguel; Delibes, Miguel; Ferreras, Pablo; Villafuerte, Rafael

    2008-10-01

    The Mediterranean Basin is a global hotspot of biodiversity. Hotspots are said to be experiencing a major loss of habitat, but an added risk could be the decline of some species having a special role in ecological relationships of the system. We reviewed the role of European rabbits (Oryctolagus cuniculus) as a keystone species in the Iberian Peninsula portion of the Mediterranean hotspot. Rabbits conspicuously alter plant species composition and vegetation structure through grazing and seed dispersal, which creates open areas and preserves plant species diversity. Moreover, rabbit latrines have a demonstrable effect on soil fertility and plant growth and provide new feeding resources for many invertebrate species. Rabbit burrows provide nest sites and shelter for vertebrates and invertebrates. In addition, rabbits serve as prey for a number of predators, including the critically endangered Iberian lynx (Lynx pardinus) and Spanish Imperial Eagle (Aquila adalberti). Thus, the Mediterranean ecosystem of the Iberian Peninsula should be termed "the rabbit's ecosystem." To our knowledge, this is the first empirical support for existence of a multifunctional keystone species in a global hotspot of biodiversity. Rabbit populations have declined drastically on the Iberian Peninsula, with potential cascading effects and serious ecological and economic consequences. From this perspective, rabbit recovery is one of the biggest challenges for conservation of the Mediterranean Basin hotspot.

  13. Installation and management of the SPS and LEP control system computers

    International Nuclear Information System (INIS)

    Bland, Alastair

    1994-01-01

    Control of the CERN SPS and LEP accelerators and service equipment on the two CERN main sites is performed via workstations, file servers, Process Control Assemblies (PCAs) and Device Stub Controllers (DSCs). This paper describes the methods and tools that have been developed to manage the file servers, PCAs and DSCs since the LEP startup in 1989. There are five operational DECstation 5000s used as file servers and boot servers for the PCAs and DSCs. The PCAs consist of 90 SCO Xenix 386 PCs, 40 LynxOS 486 PCs and more than 40 older NORD 100s. The DSCs consist of 90 OS-968030 VME crates and 10 LynxOS 68030 VME crates. In addition there are over 100 development systems. The controls group is responsible for installing the computers, starting all the user processes and ensuring that the computers and the processes run correctly. The operators in the SPS/LEP control room and the Services control room have a Motif-based X window program which gives them, in real time, the state of all the computers and allows them to solve problems or reboot them. ((orig.))

  14. Statistical core design

    International Nuclear Information System (INIS)

    Oelkers, E.; Heller, A.S.; Farnsworth, D.A.; Kearfott, K.J.

    1978-01-01

    The report describes the statistical analysis of DNBR thermal-hydraulic margin of a 3800 MWt, 205-FA core under design overpower conditions. The analysis used LYNX-generated data at predetermined values of the input variables whose uncertainties were to be statistically combined. LYNX data were used to construct an efficient response surface model in the region of interest; the statistical analysis was accomplished through the evaluation of core reliability; utilizing propagation of the uncertainty distributions of the inputs. The response surface model was implemented in both the analytical error propagation and Monte Carlo Techniques. The basic structural units relating to the acceptance criteria are fuel pins. Therefore, the statistical population of pins with minimum DNBR values smaller than specified values is determined. The specified values are designated relative to the most probable and maximum design DNBR values on the power limiting pin used in present design analysis, so that gains over the present design criteria could be assessed for specified probabilistic acceptance criteria. The results are equivalent to gains ranging from 1.2 to 4.8 percent of rated power dependent on the acceptance criterion. The corresponding acceptance criteria range from 95 percent confidence that no pin will be in DNB to 99.9 percent of the pins, which are expected to avoid DNB

  15. Computer gaming comes to service rig training

    Energy Technology Data Exchange (ETDEWEB)

    Mowers, J.

    2007-05-15

    This article addressed the challenge of providing service rig workers with a good understanding of the tasks and risks involved in the job before they even step out into the field. The product, SimuLynx was presented. SimuLynx is based on video and gaming technology to immerse the user in the service rig work environment with other crew members. The user tries to perform the different steps of a junior floorhand's job while a coach gives directions. The article discussed how the system works. For example, when faced with a task, the user chooses from several options. The coach informs the virtual junior floorhand if the decision was right or wrong. He will also give warnings and let the user realize the consequences of a wrong action. The benefits of the system were also presented. For example, instead of 30 days of on-the-job training, an employee may only need several days after going through the program. Other benefits that were reviewed included reduced accident risk-levels for new workers; higher rig efficiency; and, lower training costs. In addition, a potential recruit can decide if the job is right for him before signing up for an expensive course or starting off with a service rig company. As well, the rig company can decide if someone is suitable before hiring that person. 3 figs.

  16. Game statistics for the Island of Olkiluoto in 2011-2012

    Energy Technology Data Exchange (ETDEWEB)

    Niemi, M.; Nieminen, M. [Faunatica Oy, Espoo (Finland); Jussila, I. [Turku Univ. (Finland)

    2012-11-15

    The game statistics for the island of Olkiluoto were updated in the summer 2012 and compared with earlier statistics. Population size estimates are based on interviews of the local hunters. No moose or deer inventories were made in the winter 2011-2012. The moose population has been decreasing slightly during the past ten years. The increasing lynx population has decreasing effect on small ungulate (white-tailed deer and roe deer) populations. The number of hunted mountain hares and European brown hares decreased when comparing the previous year. In addition, the number of hunted raccoon dogs was about 50 per cent lower than in the year 2010. Altogether 27 waterfowls were hunted in 2011. The population of mountain hare is abundant, despite that there were lynx living on the eastern part of island during the winter 2011. Based on track observations, there are pine martens living on the area as well. In addition, there were some observations of wolves visiting on the area. The winter 2011-2012 was milder than the previous one, and it seemed that young swans wintering on the area survived better that in the previous winter. (orig.)

  17. Bovine Tuberculosis (Mycobacterium bovis) in Wildlife in Spain

    Science.gov (United States)

    Aranaz, Alicia; de Juan, Lucía; Montero, Natalia; Sánchez, Celia; Galka, Margarita; Delso, Consuelo; Álvarez, Julio; Romero, Beatriz; Bezos, Javier; Vela, Ana I.; Briones, Victor; Mateos, Ana; Domínguez, Lucas

    2004-01-01

    Mycobacterium bovis infection in wildlife and feral species is a potential source of infection for livestock and a threat to protected and endangered species. The aim of this study was to identify Spanish wild animal species infected with M. bovis through bacteriological culture and spacer oligonucleotide typing (spoligotyping) of isolates for epidemiological purposes. This study included samples from red deer (Cervus elaphus), fallow deer (Dama dama), wild boar (Sus scrofa), Iberian lynx (Lynx pardina), hare (Lepus europaeus), and cattle (Bos taurus). They were collected in several geographical areas that were selected for their unique ecological value and/or known relationships between wildlife and livestock. In the areas included in this survey, M. bovis strains with the same spoligotyping pattern were found infecting several wild species and livestock, which indicates an epidemiological link. A locally predominant spoligotype was found in these areas. Better understanding of the transmission and distribution of disease in these populations will permit more precise targeting of control measures. PMID:15184440

  18. Game statistics for the Island of Olkiluoto in 2011-2012

    International Nuclear Information System (INIS)

    Niemi, M.; Nieminen, M.; Jussila, I.

    2012-11-01

    The game statistics for the island of Olkiluoto were updated in the summer 2012 and compared with earlier statistics. Population size estimates are based on interviews of the local hunters. No moose or deer inventories were made in the winter 2011-2012. The moose population has been decreasing slightly during the past ten years. The increasing lynx population has decreasing effect on small ungulate (white-tailed deer and roe deer) populations. The number of hunted mountain hares and European brown hares decreased when comparing the previous year. In addition, the number of hunted raccoon dogs was about 50 per cent lower than in the year 2010. Altogether 27 waterfowls were hunted in 2011. The population of mountain hare is abundant, despite that there were lynx living on the eastern part of island during the winter 2011. Based on track observations, there are pine martens living on the area as well. In addition, there were some observations of wolves visiting on the area. The winter 2011-2012 was milder than the previous one, and it seemed that young swans wintering on the area survived better that in the previous winter. (orig.)

  19. Proteomic profile of serum of pregnant women carring a fetus with Down syndrome using nano uplc Q-tof ms/ms technology.

    Science.gov (United States)

    López Uriarte, Graciela Arelí; Burciaga Flores, Carlos Horacio; Torres de la Cruz, Víctor Manuel; Medina Aguado, María Magdalena; Gómez Puente, Viviana Maricela; Romero Gutiérrez, Liliana Nayeli; Martínez de Villarreal, Laura Elia

    2018-06-01

    Prenatal diagnosis of Down syndrome (DS) is based on the calculated risk of maternal age, biochemical and ultrasonographic markers and recently by cfDNA. Differences in proteomic profiles may give an opportunity to find new biomarkers. Characterize proteome of serum of mothers carrying DS fetus. Blood serum samples of three groups of women were obtained, (a) 10 non-pregnant, (b) 10 pregnant with healthy fetus by ultrasound evaluation, (c) nine pregnant with DS fetus. Sample preparation was as follows: Albumin/IgG depletion, desalting, and trypsin digestion; the process was performed in nanoUPLC MS/MS. Data analysis was made with Mass Lynx 4.1 and ProteinLynx Global Server 3.0, peptide and protein recognition by MASCOT algorithm and UNIPROT-Swissprot database. Each group showed different protein profiles. Some proteins were shared between groups. Only sera from pregnant women showed proteins related to immune and clot pathways. Mothers with DS fetus had 42 specific proteins. We found a different serum protein profile in mothers carrying DS fetuses that do not reflect expression of genes in the extra chromosome. Further studies will be necessary to establish the role of these proteins in aneuploid fetus and analyze their possible use as potential biomarkers.

  20. Design exploration and verification platform, based on high-level modeling and FPGA prototyping, for fast and flexible digital communication in physics experiments

    International Nuclear Information System (INIS)

    Magazzù, G; Borgese, G; Costantino, N; Fanucci, L; Saponara, S; Incandela, J

    2013-01-01

    In many research fields as high energy physics (HEP), astrophysics, nuclear medicine or space engineering with harsh operating conditions, the use of fast and flexible digital communication protocols is becoming more and more important. The possibility to have a smart and tested top-down design flow for the design of a new protocol for control/readout of front-end electronics is very useful. To this aim, and to reduce development time, costs and risks, this paper describes an innovative design/verification flow applied as example case study to a new communication protocol called FF-LYNX. After the description of the main FF-LYNX features, the paper presents: the definition of a parametric SystemC-based Integrated Simulation Environment (ISE) for high-level protocol definition and validation; the set up of figure of merits to drive the design space exploration; the use of ISE for early analysis of the achievable performances when adopting the new communication protocol and its interfaces for a new (or upgraded) physics experiment; the design of VHDL IP cores for the TX and RX protocol interfaces; their implementation on a FPGA-based emulator for functional verification and finally the modification of the FPGA-based emulator for testing the ASIC chipset which implements the rad-tolerant protocol interfaces. For every step, significant results will be shown to underline the usefulness of this design and verification approach that can be applied to any new digital protocol development for smart detectors in physics experiments.

  1. Design exploration and verification platform, based on high-level modeling and FPGA prototyping, for fast and flexible digital communication in physics experiments

    Science.gov (United States)

    Magazzù, G.; Borgese, G.; Costantino, N.; Fanucci, L.; Incandela, J.; Saponara, S.

    2013-02-01

    In many research fields as high energy physics (HEP), astrophysics, nuclear medicine or space engineering with harsh operating conditions, the use of fast and flexible digital communication protocols is becoming more and more important. The possibility to have a smart and tested top-down design flow for the design of a new protocol for control/readout of front-end electronics is very useful. To this aim, and to reduce development time, costs and risks, this paper describes an innovative design/verification flow applied as example case study to a new communication protocol called FF-LYNX. After the description of the main FF-LYNX features, the paper presents: the definition of a parametric SystemC-based Integrated Simulation Environment (ISE) for high-level protocol definition and validation; the set up of figure of merits to drive the design space exploration; the use of ISE for early analysis of the achievable performances when adopting the new communication protocol and its interfaces for a new (or upgraded) physics experiment; the design of VHDL IP cores for the TX and RX protocol interfaces; their implementation on a FPGA-based emulator for functional verification and finally the modification of the FPGA-based emulator for testing the ASIC chipset which implements the rad-tolerant protocol interfaces. For every step, significant results will be shown to underline the usefulness of this design and verification approach that can be applied to any new digital protocol development for smart detectors in physics experiments.

  2. XCOR, developing the next generation spaceplane

    CERN Document Server

    2016-01-01

    Employing the same informational approach Erik Seedhouse used in "SpaceX" and "Bigelow Aerospace", this new book familiarizes space enthusiasts with the company XCOR Aerospace and examines the design of the two-seater Lynx. The new spaceplane's low weight and high octane fuel confer important advantages, such as direct runway launches and the ability to fly several times per day. Over the last 15 years, XCOR has developed and built 13 different rocket engines, built and flown two manned rocket-powered aircraft and has accumulated over 4,000 engine firings and nearly 500 minutes of run time on their engines.  This book serves as a go-to reference guide for suborbital scientists and those seeking to learn how one company has found success. Additionally, it describes the medical and training requirements for those flying on board the Lynx and the related critical roles of the astronaut trainers and a new breed of commercial space pilots. The end result is a thorough chronicle of the development o...

  3. A framework for quantitative assessment of impacts related to energy and mineral resource development

    Science.gov (United States)

    Haines, Seth S.; Diffendorfer, James; Balistrieri, Laurie S.; Berger, Byron R.; Cook, Troy A.; Gautier, Donald L.; Gallegos, Tanya J.; Gerritsen, Margot; Graffy, Elisabeth; Hawkins, Sarah; Johnson, Kathleen; Macknick, Jordan; McMahon, Peter; Modde, Tim; Pierce, Brenda; Schuenemeyer, John H.; Semmens, Darius; Simon, Benjamin; Taylor, Jason; Walton-Day, Katherine

    2013-01-01

    Natural resource planning at all scales demands methods for assessing the impacts of resource development and use, and in particular it requires standardized methods that yield robust and unbiased results. Building from existing probabilistic methods for assessing the volumes of energy and mineral resources, we provide an algorithm for consistent, reproducible, quantitative assessment of resource development impacts. The approach combines probabilistic input data with Monte Carlo statistical methods to determine probabilistic outputs that convey the uncertainties inherent in the data. For example, one can utilize our algorithm to combine data from a natural gas resource assessment with maps of sage grouse leks and piñon-juniper woodlands in the same area to estimate possible future habitat impacts due to possible future gas development. As another example: one could combine geochemical data and maps of lynx habitat with data from a mineral deposit assessment in the same area to determine possible future mining impacts on water resources and lynx habitat. The approach can be applied to a broad range of positive and negative resource development impacts, such as water quantity or quality, economic benefits, or air quality, limited only by the availability of necessary input data and quantified relationships among geologic resources, development alternatives, and impacts. The framework enables quantitative evaluation of the trade-offs inherent in resource management decision-making, including cumulative impacts, to address societal concerns and policy aspects of resource development.

  4. Analysis of the Essential Oil of Solidago canadensis.

    Science.gov (United States)

    Kalemba, D; Góra, J; Kurowska, A

    1990-04-01

    The analysis of the volatile compounds in the essential oil of SOLIDAGO CANADENSISL. sensu lato (Compositae) GC and GC-MS demonstrated the presence of at least 36 compounds, 18 of which were identified. The Major comonenets are gamma (2)- and delta-cadinenes.

  5. Biomass production and carbon storage of Populus ×canadensis ...

    African Journals Online (AJOL)

    euramericana (Dode) Guinier ex Piccarolo) clone I-214 have good potential for biomass production. The objective of the study was estimation of biomass using allometric equations and estimation of carbon allocation according to tree components.

  6. DNA Fingerprinting Eastern Redbud Cultivars (Cercis canadensis) Using SSR Markers

    Science.gov (United States)

    In this study we present data for a subset of SSR loci, 76 out of the 130 high-quality loci, which were selected out of hundreds of SSR loci identified from a SSR-enriched library. SSR markers are abundant in eukaryotic genomes and are highly reproducible. Previously, we have used SSR markers to e...

  7. Differential immediate and sustained memory enhancing effects of alpha7 nicotinic receptor agonists and allosteric modulators in rats.

    Directory of Open Access Journals (Sweden)

    Morten S Thomsen

    Full Text Available The α7 nicotinic acetylcholine receptor (nAChR is a potential target for the treatment of cognitive deficits in patients with schizophrenia, ADHD and Alzheimer's disease. Here we test the hypothesis that upregulation of α7 nAChR levels underlies the enhanced and sustained procognitive effect of repeated administration of α7 nAChR agonists. We further compare the effect of agonists to that of α7 nAChR positive allosteric modulators (PAMs, which do not induce upregulation of the α7 nAChR. Using the social discrimination test as a measure of short-term memory, we show that the α7 nAChR agonist A-582941 improves short-term memory immediately after repeated (7× daily, but not a single administration. The α7 nAChR PAMs PNU-120596 and AVL-3288 do not affect short-term memory immediately after a single or repeated administration. This demonstrates a fundamental difference in the behavioral effects of agonists and PAMs that may be relevant for clinical development. Importantly, A-582941 and AVL-3288 increase short-term memory 24 hrs after repeated, but not a single, administration, suggesting that repeated administration of both agonists and PAMs may produce sustained effects on cognitive performance. Subsequent [(125I]-bungarotoxin autoradiography revealed no direct correlation between α7 nAChR levels in frontal cortical or hippocampal brain regions and short-term memory with either compound. Additionally, repeated treatment with A-582941 did not affect mRNA expression of RIC-3 or the lynx-like gene products lynx1, lynx2, PSCA, or Ly6H, which are known to affect nAChR function. In conclusion, both α7 nAChR agonists and PAMs exhibit sustained pro-cognitive effects after repeated administration, and altered levels of the α7 nAChR per se, or that of endogenous regulators of nAChR function, are likely not the major cause of this effect.

  8. New Metabolites of Coumarin Detected in Human Urine Using Ultra Performance Liquid Chromatography/Quadrupole-Time-of-Flight Tandem Mass Spectrometry

    Directory of Open Access Journals (Sweden)

    Letícia Paula Leonart

    2017-11-01

    Full Text Available Coumarin (1,2-benzopyrone is a natural compound whose metabolism in humans was established in the 1970s. However, a new metabolite was recently identified in human plasma, indicating that the metabolism of coumarin has not been completely elucidated. To complement the knowledge of its metabolism, a rapid and sensitive method using UPLC-QTOF-MS was developed. A total of 12 metabolites was identified using MetaboLynxTM software, including eight metabolites not previously reported in human urine. The identified biotransformation included hydroxylation, glucuronidation, sulfation, methylation, and conjugation with N-acetylcysteine. The present work demonstrates that the metabolism study of coumarin was incomplete, possibly due to limitations of old techniques. The identification of eight inedited metabolites of such a simple molecule suggests that the information regarding the metabolism of other drugs may also be incomplete, and therefore, new investigations are necessary.

  9. A Testbed For Validating the LHC Controls System Core Before Deployment

    CERN Document Server

    Nguyen Xuan, J

    2011-01-01

    Since the start-up of the LHC, it is crucial to carefully test core controls components before deploying them operationally. The Testbed of the CERN accelerator controls group was developed for this purpose. It contains different hardware (PPC, i386) running various operating systems (Linux and LynxOS) and core software components running on front-ends, communication middleware and client libraries. The Testbed first executes integration tests to verify that the components delivered by individual teams interoperate, and then system tests, which verify high-level, end-user functionality. It also verifies that different versions of components are compatible, which is vital, because not all parts of the operational LHC control system can be upgraded simultaneously. In addition, the Testbed can be used for performance and stress tests. Internally, the Testbed is driven by Atlassian Bamboo, a Continuous Integration server, which builds and deploys automatically new software versions into the Test...

  10. Inventory of mammals at Forsmark and Haallnaes; Inventering av daeggdjur i Forsmark och Haallnaes

    Energy Technology Data Exchange (ETDEWEB)

    Truve, Johan [Svensk Naturfoervaltning AB, Goeteborg (Sweden)

    2012-08-15

    A selection of terrestrial mammals was surveyed in the SKB site investigation areas near Forsmark and Haallnaes between January and April 2012. The methods that were used include snow tracking along line transects, snow tracking along water, aerial survey and fecal pellet counts. The same species were found in 2012 as in previous surveys performed in 2002, 2003 and 2007. Some species show a large variation in density between years and it is difficult to draw any conclusions about their long term development. Several carnivores, i.e. lynx, fox and otter show a positive growth rate in both areas. The wild boar population is also growing whilst moose density remains fairly stable and roe deer are becoming less numerous.

  11. Evolution in controls methods for the SPS power converters

    CERN Document Server

    Dinius, A H; Brazier, J C L

    1995-01-01

    In common with much accelerator specific material, there is a constant need to improve both hardware and software for power converter control. Maintenance and performance improvements of older systems have become extremely tedious and in some areas impossible. By using modern real-time software and the latest high-performance processors, such problems should be substantially reduced. This paper describes the software concepts and the hardware chosen for the upgrade of the existing facilities. Using the UNIX compatible LynxOS real time kernel, running on a PowerPC 603 in a VME environment, this new approach provides excellent performance while retaining the desired flexibility for future enhancements. The 64 channel system is implemented as a set of cooperating processes, several of which are multi-threaded. Processes include analogue function generation, analogue measurement and digital I/O, all of which are accurately scheduled by the accelerator timing system. This generalised structure, which performs comp...

  12. Mechanosynthesis, crystal structure and magnetic characterization of neodymium orthoferrite

    Energy Technology Data Exchange (ETDEWEB)

    Serna, Pedro Vera; Campos, Cecilio Garcia [Division de Ingenierias, Universidad Politecnica de Tecamac (UPTECAMAC), Tecamac de Felipe Villanueva, Estado de Mexico (Mexico); De Jesus, Felix Sanchez; Miro, Ana Maria Bolarin [Area Academica de Ciencias de la Tierra y Materiales, Universidad Autonoma del Estado de Hidalgo (UAEH), Mineral de la Reforma, Hidalgo (Mexico); Loran, Jose Antonio Juanico [Division de Ingenieria Industrial Nanotecnologia, Universidad Politecnica del Valle de Mexico (UPVM), Tultitlan, Estado de Mexico (Mexico); Longwell, Jeffrey, E-mail: pedrovera.upt@gmail.com [Department of Languages and Linguistics, New Mexico State University (NMSU), Las Cruces, NM (United States)

    2016-03-15

    Neodymium orthoferrite NdFeO{sub 3} was obtained at room temperature by mechanosynthesis with a stoichiometric ratio of Nd2O{sub 3} and Fe{sub 2}O{sub 3} powders, whereas the traditional synthesis requires a temperature of approximately 1000 °C. The crystal structure was analyzed by X-ray diffraction analysis using Cu radiation and a LynxEye XE detector, whose strong fluorescence filtering enabled a high signal intensity. The analysis indicated that the obtained crystallites were nano-sized. The particle morphology was observed by scanning electron microscopy, and the magnetic saturation was tested by vibrating sample magnetometry. The synthesis of NdFeO{sub 3} was detected after a few hours of milling, indicating that the milling imparted mechanical energy to the system. (author)

  13. Nonparametric Inference for Periodic Sequences

    KAUST Repository

    Sun, Ying

    2012-02-01

    This article proposes a nonparametric method for estimating the period and values of a periodic sequence when the data are evenly spaced in time. The period is estimated by a "leave-out-one-cycle" version of cross-validation (CV) and complements the periodogram, a widely used tool for period estimation. The CV method is computationally simple and implicitly penalizes multiples of the smallest period, leading to a "virtually" consistent estimator of integer periods. This estimator is investigated both theoretically and by simulation.We also propose a nonparametric test of the null hypothesis that the data have constantmean against the alternative that the sequence of means is periodic. Finally, our methodology is demonstrated on three well-known time series: the sunspots and lynx trapping data, and the El Niño series of sea surface temperatures. © 2012 American Statistical Association and the American Society for Quality.

  14. PROFIBUS-DP to G-64 configurable interface

    CERN Document Server

    Carlier, E; Rochez, J; Serrano, J; CERN. Geneva. SPS and LHC Division

    2001-01-01

    Since many years, the SL/BT group has developed specific G-64 hardware modules for the control of the fast pulsed magnets. Up to now, the integration of these modules into the accelerator control system has been done using a MIL1553 fieldbus in command/response mode connected to a LynxOS front-end. In 1996 and 1998, recommendations for the use of industrial fieldbuses and programmable logic controllers were issued at CERN. In order to integrate the existing G-64 hardware into this environment based on industrial components, an interface between the G-64 bus and the PROFIBUS-DP fieldbus has been developed. This interface is based on a modular and open hardware architecture with on one side an off-the-shelf industrial, fieldbus independent, interface and on the other side a FPGA (Field Programmable Gate Array). Required functionality has been implemented within the FPGA with VHDL (Very high-speed integrated circuit Hardware Description Language).

  15. The new generation of PowerPC VMEbus front end computers for the CERN SPS and LEP accelerators control system

    CERN Document Server

    Van den Eynden, M

    1995-01-01

    The CERN SPS and LEP PowerPC project is aimed at introducing a new generation of PowerPC VMEbus processor modules running the LynxOS real-time operating system. This new generation of front end computers using the state-of-the-art microprocessor technology will first replace the obsolete Xenix PC based systems (about 140 installations) successfully used since 1988 to control the LEP accelerator. The major issues addressed in the scope of this large scale project are the technical specification for the new PowerPC technology, the re-engineering aspects, the interfaces with other CERN wide projects, and the set up of a development environment. This project offers also support for other major SPS and LEP projects interested in the PowerPC microprocessor technology.

  16. High performance message passing for the ATLAS DAQ/EF-1 project

    CERN Document Server

    Mornacchi, Giuseppe

    1999-01-01

    Summary form only. A message passing library has been developed in the context of the ATLAS DAQ/EF-1 project. It is used for time critical applications within the front-end part of the DAQ system, mainly to exchange data control messages between I/O processors. Key objectives of the design were low message overheads, efficient use of the data transfer buses, provision of broadcast functionality and a hardware and operating system independent implementation of the application interface. The design and implementation of the message passing library are presented. As required by the project, the implementation is based on commercial components, namely VMEbus, PCI, the Lynx-OS real-time operating system and an additional inter- processor link, PVIC. The latter offers broadcast functionality identified as being important to the overall performance of the message passing. In addition, performance benchmarks for all implementing buses are presented for both simple test programs and the full DAQ applications. (0 refs)...

  17. The new generation of PowerPC VMEbus front end computers for the CERN SPS and LEP accelerators system

    CERN Document Server

    Charrue, P; Ghinet, F; Ribeiro, P

    1995-01-01

    The CERN SPS and LEP PowerPC project is aimed at introducing a new generation of PowerPC VMEbus processor modules running the LynxOS real-time operating system. This new generation of front end computers using the state-of-the-art microprocessor technology will first replace the obsolete XENIX PC based systems (about 140 installations) successfully used since 1988 to control the LEP accelerator. The major issues addressed in the scope of this large scale project are the technical specification for the new PowerPC technology, the re-engineering aspects, the interfaces with other CERN wide projects, and the set up of a development environment. This project offers also support for other major SPS and LEP projects interested in the PowerPC microprocessor technology.

  18. Performance and scalability of the back-end sub-system in the ATLAS DAQ/EF prototype

    CERN Document Server

    Alexandrov, I N; Badescu, E; Burckhart, Doris; Caprini, M; Cohen, L; Duval, P Y; Hart, R; Jones, R; Kazarov, A; Kolos, S; Kotov, V; Laugier, D; Mapelli, Livio P; Moneta, L; Qian, Z; Radu, A A; Ribeiro, C A; Roumiantsev, V; Ryabov, Yu; Schweiger, D; Soloviev, I V

    2000-01-01

    The DAQ group of the future ATLAS experiment has developed a prototype system based on the trigger/DAQ architecture described in the ATLAS Technical Proposal to support studies of the full system functionality, architecture as well as available hardware and software technologies. One sub-system of this prototype is the back- end which encompasses the software needed to configure, control and monitor the DAQ, but excludes the processing and transportation of physics data. The back-end consists of a number of components including run control, configuration databases and message reporting system. The software has been developed using standard, external software technologies such as OO databases and CORBA. It has been ported to several C++ compilers and operating systems including Solaris, Linux, WNT and LynxOS. This paper gives an overview of the back-end software, its performance, scalability and current status. (17 refs).

  19. Early-type galaxies: mass-size relation at z ˜ 1.3 for different environments

    Science.gov (United States)

    Raichoor, A.; Mei, S.; Stanford, S. A.; Holden, B. P.; Nakata, F.; Rosati, P.; Shankar, F.; Tanaka, M.; Ford, H.; Huertas-Company, M.; Illingworth, G.; Kodama, T.; Postman, M.; Rettura, A.; Blakeslee, J. P.; Demarco, R.; Jee, M. J.; White, R. L.

    2011-12-01

    We combine multi-wavelength data of the Lynx superstructure and GOODS/CDF-S to build a sample of 75 visually selected early-type galaxies (ETGs), spanning different environments (cluster/group/field) at z ˜ 1.3. By estimating their mass, age (SED fitting, with a careful attention to the stellar population model used) and size, we are able to probe the dependence on the environment of the mass-size relation. We find that, for ETGs with 10^{10} < M / M_⊙ < 10^{11.5}, (1) the mass-size relation in the field did not evolve overall from z ˜ 1.3 to present; (2) the mass-size relation in cluster/group environments at z ˜ 1.3 lies at smaller sizes than the local mass-size relation (R_{e,z ˜ 1.3}/R_{e,z = 0} ˜ 0.6-0.8).

  20. Recognition and Reconstruction of Zebra Crossings on Roads from Mobile Laser Scanning Data

    Directory of Open Access Journals (Sweden)

    Lin Li

    2016-07-01

    Full Text Available Zebra crossings provide guidance and warning to pedestrians and drivers, thereby playing an important role in traffic safety management. Most previous studies have focused on detecting zebra stripes but have not provided full information about the areas, which is critical to both driver assistance systems and guide systems for blind individuals. This paper presents a stepwise procedure for recognizing and reconstructing zebra crossings using mobile laser scanning data. First, we propose adaptive thresholding based on road surface partitioning to reduce the impact of intensity unevenness and improve the accuracy of road marking extraction. Then, dispersion degree filtering is used to reduce the noise. Finally, zebra stripes are recognized according to the rectangular feature and fixed size, which is followed by area reconstruction according to arrangement patterns. We test our method on three datasets captured by an Optech Lynx mobile mapping system. The total recognition rate of 90.91% demonstrates the effectiveness of the method.

  1. Design and Optimization of Multi-Pixel Transition-Edge Sensors for X-Ray Astronomy Applications

    Science.gov (United States)

    Smith, Stephen J.; Adams, Joseph S.; Bandler, Simon R.; Chervenak, James A.; Datesman, Aaron Michael; Eckart, Megan E.; Ewin, Audrey J.; Finkbeiner, Fred M.; Kelley, Richard L.; Kilbourne, Caroline A.; hide

    2017-01-01

    Multi-pixel transition-edge sensors (TESs), commonly referred to as 'hydras', are a type of position sensitive micro-calorimeter that enables very large format arrays to be designed without commensurate increase in the number of readout channels and associated wiring. In the hydra design, a single TES is coupled to discrete absorbers via varied thermal links. The links act as low pass thermal filters that are tuned to give a different characteristic pulse shape for x-ray photons absorbed in each of the hydra sub pixels. In this contribution we report on the experimental results from hydras consisting of up to 20 pixels per TES. We discuss the design trade-offs between energy resolution, position discrimination and number of pixels and investigate future design optimizations specifically targeted at meeting the readout technology considered for Lynx.

  2. The importance of pesticide exposure duration and mode on the foraging of an agricultural pest predator.

    Science.gov (United States)

    Brown, Caitlyn; Hanna, Chadwick J; Hanna, Catherine J B

    2015-02-01

    The striped lynx spider (Oxyopes salticus), is a natural predator of crop pests and therefore frequently encounters pesticides on its substrate and its prey. While pesticide exposure may negatively impact the lifespan of spiders, sublethal effects can also alter their normal behaviors. This study examined how prey capture was affected when spiders and their prey were exposed to bifenthrin and malathion. When spiders were continually exposed to bifenthrin residues, prey capture decreased over time, but mortality was not affected. Malathion exposed spiders, however, showed increased mortality, but their ability to catch prey was unaltered. When spiders encountered pesticide dosed prey, predation was unaffected, implying that spiders are unable to detect residues on prey. These results improve the understanding of how pesticides affect natural pest control and raise questions about the functional roles that spiders play when exposed to different chemicals.

  3. An FPGA Based Multiprocessing CPU for Beam Synchronous Timing in CERN's SPS and LHC

    CERN Document Server

    Ballester, F J; Gras, J J; Lewis, J; Savioz, J J; Serrano, J

    2003-01-01

    The Beam Synchronous Timing system (BST) will be used around the LHC and its injector, the SPS, to broadcast timing meassages and synchronize actions with the beam in different receivers. To achieve beam synchronization, the BST Master card encodes messages using the bunch clock, with a nominal value of 40.079 MHz for the LHC. These messages are produced by a set of tasks every revolution period, which is every 89 us for the LHC and every 23 us for the SPS, therefore imposing a hard real-time constraint on the system. To achieve determinism, the BST Master uses a dedicated CPU inside its main Field Programmable Gate Array (FPGA) featuring zero-delay hardware task switching and a reduced instruction set. This paper describes the BST Master card, stressing the main FPGA design, as well as the associated software, including the LynxOS driver and the tailor-made assembler.

  4. Manipulating neuronal circuits with endogenous and recombinant cell-surface tethered modulators

    Directory of Open Access Journals (Sweden)

    Mandë Holford

    2009-10-01

    Full Text Available Neuronal circuits depend on the precise regulation of cell-surface receptors and ion channels. An ongoing challenge in neuroscience research is deciphering the functional contribution of specific receptors and ion channels using engineered modulators. A novel strategy, termed “tethered toxins”, was recently developed to characterize neuronal circuits using the evolutionary derived selectivity of venom peptide toxins and endogenous peptide ligands, such as lynx1 prototoxins. Herein, the discovery and engineering of cell-surface tethered peptides is reviewed, with particular attention given to their cell-autonomy, modular composition, and genetic targeting in different model organisms. The relative ease with which tethered peptides can be engineered, coupled with the increasing number of neuroactive venom toxins and ligand peptides being discovered, imply a multitude of potentially innovative applications for manipulating neuronal circuits and tissue-specific cell networks, including treatment of disorders caused by malfunction of receptors and ion channels.

  5. Experimental and numerical study of the British Experimental Rotor Programme blade

    Science.gov (United States)

    Brocklehurst, Alan; Duque, Earl P. N.

    1990-01-01

    Wind-tunnel tests on the British Experimental Rotor Programme (BERP) tip are described, and the results are compared with computational fluid dynamics (CFD) results. The test model was molded using the Lynx-BERP blade tooling to provide a semispan, cantilever wing comprising the outboard 30 percent of the rotor blade. The tests included both surface-pressure measurements and flow visualization to obtain detailed information of the flow over the BERP tip for a range of angles of attack. It was observed that, outboard of the notch, favorable pressure gradients exist which ensure attached flow, and that the tip vortex also remains stable to large angles of attack. On the rotor, these features yield a very gradual break in control loads when the retreating-blade limit is eventually reached. Computational and experimental results were generally found to be in good agreement.

  6. Análise eletromiográfica e força do grupo muscular extensor do punho durante isquemia induzida Electromyographic analysis and strength of the wrist extensor muscle group during induced ischemia

    Directory of Open Access Journals (Sweden)

    CCA Bandeira

    2009-02-01

    Full Text Available OBJETIVO: Avaliar o efeito da isquemia induzida sobre os parâmetros do sinal eletromiográfico e a força do grupo muscular extensor do punho (GMEP em mulheres saudáveis. MÉTODOS: Participaram 13 voluntárias, destras, sedentárias, com idade de 23,38±2,32 anos e índice de massa corporal (IMC de 20,68±1,87kg/m². Para determinar a força do GMEP, foram realizadas 3 contrações isométricas voluntárias máximas (CIVM, utilizando-se uma célula de carga por 15 segundos, com intervalos de 2 minutos entre cada contração, sendo todo procedimento repetido por 3 dias não consecutivos. A isquemia foi realizada por 5 minutos, utilizando um esfigmomanômetro posicionado no braço dominante e inflado até a ausência do fluxo sanguíneo, confirmada pelo ultrassom Doppler. Para coleta do sinal eletromiográfico do GMEP, utilizou-se o equipamento EMG1000 (Lynx® com eletrodo de superfície diferencial (Lynx®. Foram coletadas 3 CIVM por 15 segundos, com intervalo de 30 segundos entre elas, nas situações de pré-isquemia; isquemia; pós-isquemia imediata (pós-1 e pós-isquemia tardia (pós-2 - após 10 minutos do início da isquemia. Para análise dos parâmetros do sinal eletromiográfico, root mean square (RMS, e frequência mediana do espectro de potência do sinal foi utilizado o software MATLAB 6.5.1. Para análise estatística, foram utilizados os testes de Friedman e ANOVA two-way. RESULTADOS: A isquemia promoveu redução significativa (pOBJECTIVE: To analyze the effect of induced ischemia on the parameters of electromyographic signals and the strength of the wrist extensor muscle group (WEMG in healthy women. METHODS: Thirteen right-handed sedentary subjects aged 23.38±2.32 years old, with body mass index (BMI of 20.68±1.87kg/m², took part. To determine WEMG strength, three maximal voluntary isometric contractions (MVIC were performed using a load cell for 15 seconds, with 2 minutes intervals between contractions. The entire

  7. Inventory of mammals at Forsmark and Haallnaes

    International Nuclear Information System (INIS)

    Truve, Johan

    2012-08-01

    A selection of terrestrial mammals was surveyed in the SKB site investigation areas near Forsmark and Haallnaes between January and April 2012. The methods that were used include snow tracking along line transects, snow tracking along water, aerial survey and fecal pellet counts. The same species were found in 2012 as in previous surveys performed in 2002, 2003 and 2007. Some species show a large variation in density between years and it is difficult to draw any conclusions about their long term development. Several carnivores, i.e. lynx, fox and otter show a positive growth rate in both areas. The wild boar population is also growing whilst moose density remains fairly stable and roe deer are becoming less numerous

  8. Renewing library Web sites CMS at libraries

    CERN Document Server

    Vida, A

    2006-01-01

    The use of the Internet has a ten-year history in Hungary. In the beginning, users were surfing on textual Web sites with the browser Lynx (1991), then a range of graphic browsers appeared: Mosaic (1993) , Netscape (1994), and finally Internet Explorer (1995). More and more institutions, including libraries decided to enter the World Wide Web with their own homepage. The past ten years have brought enormous changes and new requirements in the way that institutional homepages are designed. This article offers an overview of the development phases of Web sites, presents the new tools necessary for the state-of-the-art design and gives advice on their up-to-date maintenance.

  9. Smoothing Motion Estimates for Radar Motion Compensation.

    Energy Technology Data Exchange (ETDEWEB)

    Doerry, Armin W. [Sandia National Lab. (SNL-NM), Albuquerque, NM (United States)

    2017-07-01

    Simple motion models for complex motion environments are often not adequate for keeping radar data coherent. Eve n perfect motion samples appli ed to imperfect models may lead to interim calculations e xhibiting errors that lead to degraded processing results. Herein we discuss a specific i ssue involving calculating motion for groups of pulses, with measurements only available at pulse-group boundaries. - 4 - Acknowledgements This report was funded by General A tomics Aeronautical Systems, Inc. (GA-ASI) Mission Systems under Cooperative Re search and Development Agre ement (CRADA) SC08/01749 between Sandia National Laboratories and GA-ASI. General Atomics Aeronautical Systems, Inc. (GA-ASI), an affilia te of privately-held General Atomics, is a leading manufacturer of Remotely Piloted Aircraft (RPA) systems, radars, and electro-optic and rel ated mission systems, includin g the Predator(r)/Gray Eagle(r)-series and Lynx(r) Multi-mode Radar.

  10. Sylvatic trichinellosis in Texas

    Directory of Open Access Journals (Sweden)

    Pence D.B.

    2001-06-01

    Full Text Available There are no published reports of domestic or sylvatic trichinellosis in Texas. The aim of the present survey was to determine the presence of Trichinella species in selected representative species of potential wildlife reservoirs in southern Texas. In 1998-99, tongues of 211 wild mammals were collected in southern Texas: 154 coyotes (Canis latrans, three bobcats (Lynx rufus, 32 racoons (Procyon lotor, 1 3 opossum (Didelphis marsupialis, four ocelots (Leopardus pardalis and five wild boars (Sus scrofa. Presence of Trichinella sp. larvae was investigated by artificial digestion and larvae of positive samples were identified at the species level by a multiple-polymerase chain reaction analysis. Nine (5.8 % coyotes had trichinellosis ; in the muscles of seven of these coyotes, the larvae were identified as Trichinella murrelli. This is the first report of sylvatic trichinellosis in Texas.

  11. Metabolite characterization of a novel sedative drug, remimazolam in human plasma and urine using ultra high-performance liquid chromatography coupled with synapt high-definition mass spectrometry.

    Science.gov (United States)

    Zhou, Ying; Hu, Pei; Jiang, Ji

    2017-04-15

    Remimazolam is a new chemical entity belonging to the benzodiazepine class of sedative drugs, which shows faster-acting onset and recovery than currently available short-acting sedatives. In the present study, ultra high performance liquid chromatography with synapt high-definition mass spectrometry method combined with MassLynx software was established to characterize metabolites of remimazolam in human plasma and urine. In total, 5 human metabolites were detected, including 3 phase I and 2 phase II metabolites. There was no novel human metabolite detected compared to that in rat. Hydrolysis, glucuronidation and oxidation were the major metabolic reactions. To our knowledge, this is the first report of the human metabolic profile of remimazolam. Copyright © 2017 Elsevier B.V. All rights reserved.

  12. Electronic system for the automation of current measurements produced by ionization chambers

    International Nuclear Information System (INIS)

    Brancaccio, Franco; Dias, Mauro da Silva

    2002-01-01

    Ionization Chambers in current mode operation are usually used in Nuclear Metrology in the determination of radionuclide activity. For this purpose measurements of very low ionization currents, in the range of 10 -8 to 10 -14 A, are required. Usually, electrometers perform the current integration method under command of signals from an automation system, in order to reduce the measurement uncertainties. In the present work, an automation system, developed for current integration measurements at the Laboratorio de Metrologia Nuclear (LMN) of Instituto de Pesquisas Energeticas e Nucleares (IPEN), is described. This automation system is composed by software (graphic interface and control) and an electronic module connected to a microcomputer, by means of a commercial data acquisition card CAD12/32 (LYNX Tecnologia Eletronica Ltda.). Measurements, using an electrometer Keithley 616 (Keithley Instruments, Inc) and an ionization chamber IG12/A20 (20 th Century Electronics Ltd.), were performed in order to check the system and for validating the project. (author)

  13. A Modular VME Data Acquisition System for Counter Applications at the GSI Synchrotron

    CERN Document Server

    Liakin, D A

    2003-01-01

    Particle counters perform the control of beam loss and slowly extracted currents at the heavy ion synchrotron (SIS) at GSI. A new VME/Lynx - PC/Linux based data acquisition system has been developed to combine the operating purposes beam loss measurement, spill analysis, spill structure measurement and matrix switching functionality in one single assembly. In this paper a detailed PC-side software description is presented. To achieve best system stability, the software has been divided into time critical networking and data deploying threads and low or normal priority interface tasks. Some new abilities in the fields of data computation and presentation are reported. A hardware description is presented, in detail a programmable GSI-EVENT controller, which is based on an ordinary 8 bit RISC microprocessor and which has been integrated into the system, to synchronize the data acquisition with the sophisticated “virtual accelerator” timing at GSI. First experiences gained while the commission...

  14. New developments on Tore Supra data acquisition units

    International Nuclear Information System (INIS)

    Leroux, F.; Caulier, G.; Ducobu, L.; Goniche, M.; Antar, G.

    2012-01-01

    The Tore Supra data acquisition system (DAS) was designed in the early eighties and has considerably evolved since then. Three generations of data acquisition units still coexist. As cost and maintenance of different operating systems is expensive, it was decided to explore an alternative solution based on an open source operating system (OS) with a disk-less system for the fourth generation. In 2010, Linux distributions for VME bus and PCI bus systems have been evaluated and compared to Lynx OS TM real time OS. The results obtained allowed to choose a version of Linux for VME and PC platform for DAS on Tore Supra. In 2011, the Tore Supra DAS dedicated software was ported on a Linux disk-less PCI platform. The new generation was successfully tested during real plasma experiments on one diagnostic, called DCEDRE. (authors)

  15. Онтогенез Solidago canadensis L. при интродукции в условиях Ставропольской возвышенности

    OpenAIRE

    ПЕЩАНСКАЯ ЕКАТЕРИНА ВЛАДИМИРОВНА; ЦИЦИЛИН АНДРЕЙ НИКОЛАЕВИЧ

    2010-01-01

    В онтогенезе Solidago canadensis L. (Asteraceae) при интродукции в условиях Ставропольской возвышенности отмечены периоды: латентный, виргинильный, генеративный и сенильный. Латентный период представлен одним возрастным состоянием ребристыми семянками с хохолками. В виргинильном периоде выделены следующие возрастные состояния: всходы, ювенильные растения, виргинильные растения. В условиях культуры не отмечено имматурное возрастное состояние. В генеративном периоде отмечены молодые, средне-и с...

  16. Artificial intelligence: Neural network model as the multidisciplinary team member in clinical decision support to avoid medical mistakes.

    Science.gov (United States)

    Buzaev, Igor Vyacheslavovich; Plechev, Vladimir Vyacheslavovich; Nikolaeva, Irina Evgenievna; Galimova, Rezida Maratovna

    2016-09-01

    The continuous uninterrupted feedback system is the essential part of any well-organized system. We propose aLYNX concept that is a possibility to use an artificial intelligence algorithm or a neural network model in decision-making system so as to avoid possible mistakes and to remind the doctors to review tactics once more in selected cases. aLYNX system includes: registry with significant factors, decisions and results; machine learning process based on this registry data; the use of the machine learning results as the adviser. We show a possibility to build a computer adviser with a neural network model for making a choice between coronary aortic bypass surgery (CABG) and percutaneous coronary intervention (PCI) in order to achieve a higher 5-year survival rate in patients with angina based on the experience of 5107 patients. The neural network was trained by 4679 patients who achieved 5-year survival. Among them, 2390 patients underwent PCI and 2289 CABG. After training, the correlation coefficient ( r ) of the network was 0.74 for training, 0.67 for validation, 0.71 for test and 0.73 for total. Simulation of the neural network function has been performed after training in the two groups of patients with known 5-year outcome. The disagreement rate was significantly higher in the dead patient group than that in the survivor group between neural network model and heart team [16.8% (787/4679) vs. 20.3% (87/428), P  = 0.065)]. The study shows the possibility to build a computer adviser with a neural network model for making a choice between CABG and PCI in order to achieve a higher 5-year survival rate in patients with angina.

  17. The taxonomy, life cycle and pathology of Sarcoptes scabiei and Notoedres cati (Acarina, Sarcoptidae: A review in a Fennoscandian wildlife perspective

    Directory of Open Access Journals (Sweden)

    Morten Kraabøl

    2015-12-01

    Full Text Available Mites constitute an old cosmopolitan group, abundant in various terrestrial and aquatic habitats of considerable environmental variations. The majority of mites are free-living, whereas some have evolved parasitic relationships with a variety of animals either as endo- or ectoparasites. The ectoparasitic and skin burrowing Sarcoptes scabiei and Notoedres cati, cause sarcoptic and notoedric mange among a variety of mammalian species, including humans. In a non-adequate host these mites lead to pseudo-scabies which is often self-curable. The aim of this review is to provide an overview of recent knowledge on the taxonomy, life cycles and pathology of these two mites, which are of relevance to Fennoscandian wildlife, by considering knowledge on transmission vectors, host immunology, and some documented outbreaks. These mites affect the health and survival of mammals in four ways; 1 skin tissue damages, 2 loss of body fluids, 3 allergic reactions and 4 secondary bacterial infections. A short-term effect of outbreaks is usually high mortality, and long-term effects vary from extinction to biased population structure to no effect at all. Red foxes are generalist predators that are important end-hosts for mites that develop disease depending on their immunity status, and transmit mites to other hosts. Outbreaks of mange may possibly have ecological consequences on a wider scale. In an endangered species, like the arctic fox or Eurasian lynx, loss of only a few individuals can be critical. It might be wise for management authorities to develop emergency plans to minimize consequences of outbreaks of sarcoptic or notoedric mange in threatened species such as the arctic fox and the lynx.

  18. Extraordinary Genetic Diversity in a Wood Decay Mushroom.

    Science.gov (United States)

    Baranova, Maria A; Logacheva, Maria D; Penin, Aleksey A; Seplyarskiy, Vladimir B; Safonova, Yana Y; Naumenko, Sergey A; Klepikova, Anna V; Gerasimov, Evgeny S; Bazykin, Georgii A; James, Timothy Y; Kondrashov, Alexey S

    2015-10-01

    Populations of different species vary in the amounts of genetic diversity they possess. Nucleotide diversity π, the fraction of nucleotides that are different between two randomly chosen genotypes, has been known to range in eukaryotes between 0.0001 in Lynx lynx and 0.16 in Caenorhabditis brenneri. Here, we report the results of a comparative analysis of 24 haploid genotypes (12 from the United States and 12 from European Russia) of a split-gill fungus Schizophyllum commune. The diversity at synonymous sites is 0.20 in the American population of S. commune and 0.13 in the Russian population. This exceptionally high level of nucleotide diversity also leads to extreme amino acid diversity of protein-coding genes. Using whole-genome resequencing of 2 parental and 17 offspring haploid genotypes, we estimate that the mutation rate in S. commune is high, at 2.0 × 10(-8) (95% CI: 1.1 × 10(-8) to 4.1 × 10(-8)) per nucleotide per generation. Therefore, the high diversity of S. commune is primarily determined by its elevated mutation rate, although high effective population size likely also plays a role. Small genome size, ease of cultivation and completion of the life cycle in the laboratory, free-living haploid life stages and exceptionally high variability of S. commune make it a promising model organism for population, quantitative, and evolutionary genetics. © The Author 2015. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution.

  19. Mammals in the areas adjacent to Forsmark and Oskarshamn. Population density, ecological data and carbon budget

    Energy Technology Data Exchange (ETDEWEB)

    Truve, Johan; Cederlund, Goeran [Svensk Naturfoervaltning AB, Ramsberg (Sweden)

    2005-06-01

    The Swedish Nuclear Fuel and Waste Management Co is in the process of selecting a safe and environmentally acceptable location for the deep-level repository of radioactive waste. SKB has expressed the importance of monitoring mammal species that are of interest both in biodiversity issues and for local hunting and recreational purposes. Two of the major goals are to: 1) monitor dynamics of population density over several years; 2) obtain information that is essential for modelling of energy/carbon flows in the biosphere and ultimately calculations of the risks of exposure to radionuclides. This report contributes to the major goals by presenting: Results from surveys of mammal abundance in the study sites near Forsmark and Oskarshamn, and a comparison with data from other surveys. A summary of traits associated to demography, resource selection and spatial distribution. A model framework that can be used to model the future development of populations. A plausible future scenario for mammal species. Mammal contribution to fluxes of energy and material in the ecosystem. Estimated harvest rates of mammals in the study sites. General conclusions that can be drawn from the survey are that population densities of the most common species are in the same range as many other populations. Lynx, wild boar, red deer and fallow deer are expanding in the areas. Marine mammals have not been surveyed but at least grey seals are important top consumers in the coastal ecosystem. Red listed species resident in the areas are Lynx, Otter, Whiskered bat, Natterer's bat, Nathusius' pipistrelle and Harbour seal. Annual production of the mammal species that were surveyed was 40-50 mg carbon/m2 and year. Hunters harvest nearly half of the production each year. Future developments for the populations are briefly discussed and a model framework that can be used to make better quantitative predictions is presented.

  20. Snapshot of Viral Infections in Wild Carnivores Reveals Ubiquity of Parvovirus and Susceptibility of Egyptian Mongoose to Feline Panleukopenia Virus

    Science.gov (United States)

    Duarte, Margarida D.; Henriques, Ana Margarida; Barros, Sílvia Carla; Fagulha, Teresa; Mendonça, Paula; Carvalho, Paulo; Monteiro, Madalena; Fevereiro, Miguel; Basto, Mafalda P.; Rosalino, Luís Miguel; Barros, Tânia; Bandeira, Victor; Fonseca, Carlos; Cunha, Mónica V.

    2013-01-01

    endangered Iberian lynx (Lynx pardinus). PMID:23527182

  1. [Reference relationships between human and animal in Hildegard von Bingen].

    Science.gov (United States)

    Riethe, Peter

    2012-01-01

    In "De animalibus", the 7th book in the "Liber simplicis medicinae", Hildegard von Bingen describes the characteristics of four-footed land animals. Some of these have a special relationship with humans in that they embody moral qualities. An explanation for this is already given in the preface, which states that human intelligence recognizes these qualities, declaring that "You are this or that sort of creature". Since the relationship that animals have with nature shares a degree of similarity with that of man's, they can be regarded as symbolic representatives for particular human traits and characteristics. The article at hand presents Hildegard von Bingen's descriptions of the monkey, the lion, the bear, the rabbit, the dog, the cat, the wolf, the lynx, and the donkey. While the monkey just mimics man's behaviour and is imperfect in both settings, the lion embodies will power. The bear on the other hand stands for unbridled sexual desire, while in the rabbit the gentleness of a sheep is united with the bounce of a deer. The lynx is regarded as hedonistic, the donkey as stupid, and the wolf as surrounded by dangerous sylphs. In Hildegard's depictions, exotic and native animal species display rather extraordinary behavioural traits, and the medieval Christian world view of the author conveys unexpected relationships between humans and animals. In addition to empirical observation and experience, Hildegard also relies on folkloristic beliefs and magical practices related to explanatory models of her time. She allows largely unknown sources into her animal lore but never strays from her ultimate goal of having it serve to instruct people. In doing so, Hildegard removed herself far from the common tradition of medieval animal portraits.

  2. Modelling landscape-level numerical responses of predators to prey: the case of cats and rabbits.

    Directory of Open Access Journals (Sweden)

    Jennyffer Cruz

    Full Text Available Predator-prey systems can extend over large geographical areas but empirical modelling of predator-prey dynamics has been largely limited to localised scales. This is due partly to difficulties in estimating predator and prey abundances over large areas. Collection of data at suitably large scales has been a major problem in previous studies of European rabbits (Oryctolagus cuniculus and their predators. This applies in Western Europe, where conserving rabbits and predators such as Iberian lynx (Lynx pardinus is important, and in other parts of the world where rabbits are an invasive species supporting populations of introduced, and sometimes native, predators. In pastoral regions of New Zealand, rabbits are the primary prey of feral cats (Felis catus that threaten native fauna. We estimate the seasonal numerical response of cats to fluctuations in rabbit numbers in grassland-shrubland habitat across the Otago and Mackenzie regions of the South Island of New Zealand. We use spotlight counts over 1645 km of transects to estimate rabbit and cat abundances with a novel modelling approach that accounts simultaneously for environmental stochasticity, density dependence and varying detection probability. Our model suggests that cat abundance is related consistently to rabbit abundance in spring and summer, possibly through increased rabbit numbers improving the fecundity and juvenile survival of cats. Maintaining rabbits at low abundance should therefore suppress cat numbers, relieving predation pressure on native prey. Our approach provided estimates of the abundance of cats and rabbits over a large geographical area. This was made possible by repeated sampling within each season, which allows estimation of detection probabilities. A similar approach could be applied to predator-prey systems elsewhere, and could be adapted to any method of direct observation in which there is no double-counting of individuals. Reliable estimates of numerical

  3. Ups and downs of space tourism development in 60 years from moon register to spaceshiptwo CRASH

    Science.gov (United States)

    Chang, Yi-Wei; Chern, Jeng-Shing

    2016-10-01

    In human imagination, dreams and expectations, the sequence of ;space tourism; has most likely been Moon tourism, Earth orbital tourism and then suborbital tourism. But the sequence in actual development is the reverse: first Earth suborbital tourism, then orbital tourism, and finally Moon tourism. In 1954, three years before the successful launch of the first human artificial satellite, the world's oldest travel company, Thomas Cook in Britain, initiated the ;Moon Register.; Enthusiasts could sign an option for a commercial trip to the Moon and the company guaranteed to provide tickets at the earliest possible date. Sixty years later on 31st October 2014, the first SpaceShip Two (SS2) of Virgin Galactic developed for commercial suborbital space tourism (SST) and scientific research crashed at the Mojave Desert in California during test flight. Although the first privately paid space tourist had traveled to the International Space Station in 2001, this was only for millionaires and not the general public. In 2004, although SpaceShipOne won the Ansari X prize and shed the first light on SST, the commercial SST operations originally planned to be realized in 2008 are now long overdue. The SS2 has been just one of the reusable suborbital launch vehicles developed for SST and other purposes, with others including the Lynx, Spaceplane and Dream Chaser. However a tragedy in which the SS2 crashed and caused the sacrifice of one senior test pilot alerted tourists that the long overdue of SST might still be a few years away. The purposes of this paper are to review and discuss the ups and downs of space tourism development in the 60 years from 1954 to 2014, and to look forward to get more clear future from the unveiling of second SS2 on 19th February 2016 and the continuous development of Lynx Mark I. However in any case, there are still many constraints including economy.

  4. Mammals in the areas adjacent to Forsmark and Oskarshamn. Population density, ecological data and carbon budget

    Energy Technology Data Exchange (ETDEWEB)

    Truve, Johan; Cederlund, Goeran [Svensk Naturfoervaltning AB, Ramsberg (Sweden)

    2005-06-01

    The Swedish Nuclear Fuel and Waste Management Co is in the process of selecting a safe and environmentally acceptable location for the deep-level repository of radioactive waste. SKB has expressed the importance of monitoring mammal species that are of interest both in biodiversity issues and for local hunting and recreational purposes. Two of the major goals are to: 1) monitor dynamics of population density over several years; 2) obtain information that is essential for modelling of energy/carbon flows in the biosphere and ultimately calculations of the risks of exposure to radionuclides. This report contributes to the major goals by presenting: Results from surveys of mammal abundance in the study sites near Forsmark and Oskarshamn, and a comparison with data from other surveys. A summary of traits associated to demography, resource selection and spatial distribution. A model framework that can be used to model the future development of populations. A plausible future scenario for mammal species. Mammal contribution to fluxes of energy and material in the ecosystem. Estimated harvest rates of mammals in the study sites. General conclusions that can be drawn from the survey are that population densities of the most common species are in the same range as many other populations. Lynx, wild boar, red deer and fallow deer are expanding in the areas. Marine mammals have not been surveyed but at least grey seals are important top consumers in the coastal ecosystem. Red listed species resident in the areas are Lynx, Otter, Whiskered bat, Natterer's bat, Nathusius' pipistrelle and Harbour seal. Annual production of the mammal species that were surveyed was 40-50 mg carbon/m2 and year. Hunters harvest nearly half of the production each year. Future developments for the populations are briefly discussed and a model framework that can be used to make better quantitative predictions is presented.

  5. Artificial intelligence: Neural network model as the multidisciplinary team member in clinical decision support to avoid medical mistakes

    Directory of Open Access Journals (Sweden)

    Igor Vyacheslavovich Buzaev

    2016-09-01

    Full Text Available Objective: The continuous uninterrupted feedback system is the essential part of any well-organized system. We propose aLYNX concept that is a possibility to use an artificial intelligence algorithm or a neural network model in decision-making system so as to avoid possible mistakes and to remind the doctors to review tactics once more in selected cases. Method: aLYNX system includes: registry with significant factors, decisions and results; machine learning process based on this registry data; the use of the machine learning results as the adviser. We show a possibility to build a computer adviser with a neural network model for making a choice between coronary aortic bypass surgery (CABG and percutaneous coronary intervention (PCI in order to achieve a higher 5-year survival rate in patients with angina based on the experience of 5107 patients. Results: The neural network was trained by 4679 patients who achieved 5-year survival. Among them, 2390 patients underwent PCI and 2289 CABG. After training, the correlation coefficient (r of the network was 0.74 for training, 0.67 for validation, 0.71 for test and 0.73 for total. Simulation of the neural network function has been performed after training in the two groups of patients with known 5-year outcome. The disagreement rate was significantly higher in the dead patient group than that in the survivor group between neural network model and heart team [16.8% (787/4679 vs. 20.3% (87/428, P = 0.065]. Conclusion: The study shows the possibility to build a computer adviser with a neural network model for making a choice between CABG and PCI in order to achieve a higher 5-year survival rate in patients with angina. Keywords: Coronary artery bypass grafting, Percutaneous coronary intervention, Artificial intelligence, Decision making

  6. New World feline APOBEC3 potently controls inter-genus lentiviral transmission.

    Science.gov (United States)

    Konno, Yoriyuki; Nagaoka, Shumpei; Kimura, Izumi; Yamamoto, Keisuke; Kagawa, Yumiko; Kumata, Ryuichi; Aso, Hirofumi; Ueda, Mahoko Takahashi; Nakagawa, So; Kobayashi, Tomoko; Koyanagi, Yoshio; Sato, Kei

    2018-04-10

    The apolipoprotein B mRNA-editing enzyme catalytic polypeptide-like 3 (APOBEC3; A3) gene family appears only in mammalian genomes. Some A3 proteins can be incorporated into progeny virions and inhibit lentiviral replication. In turn, the lentiviral viral infectivity factor (Vif) counteracts the A3-mediated antiviral effect by degrading A3 proteins. Recent investigations have suggested that lentiviral vif genes evolved to combat mammalian APOBEC3 proteins, and have further proposed that the Vif-A3 interaction may help determine the co-evolutionary history of cross-species lentiviral transmission in mammals. Here we address the co-evolutionary relationship between two New World felids, the puma (Puma concolor) and the bobcat (Lynx rufus), and their lentiviruses, which are designated puma lentiviruses (PLVs). We demonstrate that PLV-A Vif counteracts the antiviral action of APOBEC3Z3 (A3Z3) of both puma and bobcat, whereas PLV-B Vif counteracts only puma A3Z3. The species specificity of PLV-B Vif is irrespective of the phylogenic relationships of feline species in the genera Puma, Lynx and Acinonyx. We reveal that the amino acid at position 178 in the puma and bobcat A3Z3 is exposed on the protein surface and determines the sensitivity to PLV-B Vif-mediated degradation. Moreover, although both the puma and bobcat A3Z3 genes are polymorphic, their sensitivity/resistance to PLV Vif-mediated degradation is conserved. To the best of our knowledge, this is the first study suggesting that the host A3 protein potently controls inter-genus lentiviral transmission. Our findings provide the first evidence suggesting that the co-evolutionary arms race between lentiviruses and mammals has occurred in the New World.

  7. Mammals in the areas adjacent to Forsmark and Oskarshamn. Population density, ecological data and carbon budget

    International Nuclear Information System (INIS)

    Truve, Johan; Cederlund, Goeran

    2005-06-01

    The Swedish Nuclear Fuel and Waste Management Co is in the process of selecting a safe and environmentally acceptable location for the deep-level repository of radioactive waste. SKB has expressed the importance of monitoring mammal species that are of interest both in biodiversity issues and for local hunting and recreational purposes. Two of the major goals are to: 1) monitor dynamics of population density over several years; 2) obtain information that is essential for modelling of energy/carbon flows in the biosphere and ultimately calculations of the risks of exposure to radionuclides. This report contributes to the major goals by presenting: Results from surveys of mammal abundance in the study sites near Forsmark and Oskarshamn, and a comparison with data from other surveys. A summary of traits associated to demography, resource selection and spatial distribution. A model framework that can be used to model the future development of populations. A plausible future scenario for mammal species. Mammal contribution to fluxes of energy and material in the ecosystem. Estimated harvest rates of mammals in the study sites. General conclusions that can be drawn from the survey are that population densities of the most common species are in the same range as many other populations. Lynx, wild boar, red deer and fallow deer are expanding in the areas. Marine mammals have not been surveyed but at least grey seals are important top consumers in the coastal ecosystem. Red listed species resident in the areas are Lynx, Otter, Whiskered bat, Natterer's bat, Nathusius' pipistrelle and Harbour seal. Annual production of the mammal species that were surveyed was 40-50 mg carbon/m2 and year. Hunters harvest nearly half of the production each year. Future developments for the populations are briefly discussed and a model framework that can be used to make better quantitative predictions is presented

  8. Surveys of mammal populations in the areas adjacent to Forsmark and Tierp. A pilot study 2001-2002

    Energy Technology Data Exchange (ETDEWEB)

    Cederlund, Goeran; Hammarstroem, Angelica; Wallin, Kjell [Svensk Viltfoervaltning AB, Ramsberg (Sweden)

    2003-04-01

    The Swedish Nuclear Fuel and Waste Management Co is in the process of selecting a safe and environmentally acceptable location for the deep-level repository of radioactive waste. SKB has expressed the importance of monitoring mammal species that are of interest both in biodiversity issues and for local hunting and recreational purposes. To get relevant data on the dynamics of the mammal populations it is important to estimate the abundance and variations over time. Data achieved can be used to specifically monitor endangered species (like wolf, Canis lupus, and otter, Lutra lutra), detect effects from e.g. drilling activities on populations (important to hunters) and be used for assessment programs (MKB). One of the major goals is to monitor populations over several years and to obtain information that is essential for modelling of energy/carbon flows in the biosphere and ultimately calculations of the risks of exposure to radionuclide. From late 2001 to late spring 2002 a pilot study was accomplished in the areas surrounding the suggested areas in the Tierp region and in Forsmark (Oskarshamn was not included in this pilot study). A reference area was chosen near the coast some 20 km north of Forsmark. The aim was to initiate surveys of most of the larger mammal species that were expected to be found in the region. Selected species were wolf, lynx, otter, marten, mink, red fox, beaver, wild boar, red deer, roe deer, moose, European hare and mountain hare. Several methods were used and adapted to expected habitat use and expected local density of the species. Line transects were used on snow to index (frequency of tracks crossing the transects) or calculate actual number (for example the Buffon method). Pellet counts were used in spring to calculate hare and cervid (moose and deer species) density. In mid winter an aerial (helicopter) survey was conducted along the coast to count moose. The aquatic mammals were tracked on snow along selected parts of the streams and

  9. Changes in the geographical distribution and abundance of the tick Ixodes ricinus during the past 30 years in Sweden

    Directory of Open Access Journals (Sweden)

    Jaenson Thomas GT

    2012-01-01

    respondents, the abundance of ticks had increased markedly in LB- and TBE-endemic areas in South (Götaland and Central Sweden. Conclusions The results suggest that I. ricinus has expanded its range in North Sweden and has become distinctly more abundant in Central and South Sweden during the last three decades. However, in the northern mountain region I. ricinus is still absent. The increased abundance of the tick can be explained by two main factors: First, the high availability of large numbers of important tick maintenance hosts, i.e., cervids, particularly roe deer (Capreolus capreolus during the last three decades. Second, a warmer climate with milder winters and a prolonged growing season that permits greater survival and proliferation over a larger geographical area of both the tick itself and deer. High reproductive potential of roe deer, high tick infestation rate and the tendency of roe deer to disperse great distances may explain the range expansion of I. ricinus and particularly the appearance of new TBEV foci far away from old TBEV-endemic localities. The geographical presence of LB in Sweden corresponds to the distribution of I. ricinus. Thus, LB is now an emerging disease risk in many parts of North Sweden. Unless countermeasures are undertaken to keep the deer populations, particularly C. capreolus and Dama dama, at the relatively low levels that prevailed before the late 1970s - especially in and around urban areas where human population density is high - by e.g. reduced hunting of red fox (Vulpes vulpes and lynx (Lynx lynx, the incidences of human LB and TBE are expected to continue to be high or even to increase in Sweden in coming decades.

  10. Changes in the geographical distribution and abundance of the tick Ixodes ricinus during the past 30 years in Sweden.

    Science.gov (United States)

    Jaenson, Thomas G T; Jaenson, David G E; Eisen, Lars; Petersson, Erik; Lindgren, Elisabet

    2012-01-10

    markedly in LB- and TBE-endemic areas in South (Götaland) and Central Sweden. The results suggest that I. ricinus has expanded its range in North Sweden and has become distinctly more abundant in Central and South Sweden during the last three decades. However, in the northern mountain region I. ricinus is still absent. The increased abundance of the tick can be explained by two main factors: First, the high availability of large numbers of important tick maintenance hosts, i.e., cervids, particularly roe deer (Capreolus capreolus) during the last three decades. Second, a warmer climate with milder winters and a prolonged growing season that permits greater survival and proliferation over a larger geographical area of both the tick itself and deer. High reproductive potential of roe deer, high tick infestation rate and the tendency of roe deer to disperse great distances may explain the range expansion of I. ricinus and particularly the appearance of new TBEV foci far away from old TBEV-endemic localities. The geographical presence of LB in Sweden corresponds to the distribution of I. ricinus. Thus, LB is now an emerging disease risk in many parts of North Sweden. Unless countermeasures are undertaken to keep the deer populations, particularly C. capreolus and Dama dama, at the relatively low levels that prevailed before the late 1970s--especially in and around urban areas where human population density is high--by e.g. reduced hunting of red fox (Vulpes vulpes) and lynx (Lynx lynx), the incidences of human LB and TBE are expected to continue to be high or even to increase in Sweden in coming decades.

  11. Calf mortality of semi-domesticated reindeer (Rangifer tarandus tarandus in the Finnish reindeer-herding area

    Directory of Open Access Journals (Sweden)

    Mauri Nieminen

    2013-06-01

    comprised 53% and wolf-killed 45%. Predation was 70% of total mortality in the Halla cooperative, and predation by wolf, bear, lynx and wolverine comprised on average 38%, 20%, 9% and 2.3%, respectively. The sex and pelt color did not significantly affect survival of calves. Birth weight of calves killed by bears was significantly (P<0.01 lighter than those not killed, but those calves killed by lynxes were significantly (P<0.05 heavier than that survived. Bears killed calves mainly in May-July, wolves in July-October and lynx in August-December.

  12. Aksu-Zhabagly Nature Reserve's 90-anniversary

    Directory of Open Access Journals (Sweden)

    Anatoliy F. Kovshar

    2016-05-01

    Full Text Available The Aksu-Zhabagly nature reserve is located in West Tien Shan in Kazakhstan, on the border of three countries – Kazakhstan, Kyrgyzstan and Uzbekistan (70°18'-57' E and 42°08'-30' N, with an area of 1281 km2; its length is 53 km from the most western to the most eastern point and 41 km from the most southern to the most northern point. It occupies the western limit of the Talasskiy Alatau ridge and its north-western spurs: Zhabaglytau mountains, Alatau, Bugultor, Aksutau and Ugam ridges. In the neighbouring Karatau ridge there is a palaeontological site with an area of 2.2 km2 with deposits of flora and fauna of the Jurassic period. The absolute heights above sea level are 1300–4200 m. The relief is alpine – deep canyons with steep slopes. The middle mountain zone (1300–2000 m is occupied by meadow-steppe formations with juniper sparse forests (Juniperus semiglobosa, J. seravschanica; subalpine meadows (2000–3000 m are alternated by creeping juniper thickets (Juniperus turkestanica and rocky outcrops; the alpine zone (higher than 3000 m is dominated by rocks and snowfields, and glaciers above 3500 m. The nature reserve's flora constitutes almost half of all West Tien Shan's flora and counts 1737 species, including: 235 species of fungi, 64 lichens, 63 species each of algae and mosses, as well as 1312 species of higher plants. Among those, 200 species are medicinal and 57 species are listed in the Red Data Books of Kazakhstan, Uzbekistan and Kyrgyzstan. The vertebrates fauna includes 320 species: mammals – 52 species, birds – 247 (130 of them are nesting, reptiles and amphibians – 14, fishes – 7 species. Animals inhabiting the territory include argali (Ovis ammon karelini, mountain goat (Capra sibirica, bear (Ursus arctos isabellinus, snow leopart (Uncia uncia, Turkestan lynx (Lynx lynx isabellinus; birds – bearded vulture (Gypaёtus barbatus, Himalayan snowcock (Tetraogallus himalayensis, chukar (Alectoris chukar, blue

  13. Surveys of mammal populations in the areas adjacent to Forsmark and Tierp. A pilot study 2001-2002

    International Nuclear Information System (INIS)

    Cederlund, Goeran; Hammarstroem, Angelica; Wallin, Kjell

    2003-04-01

    The Swedish Nuclear Fuel and Waste Management Co is in the process of selecting a safe and environmentally acceptable location for the deep-level repository of radioactive waste. SKB has expressed the importance of monitoring mammal species that are of interest both in biodiversity issues and for local hunting and recreational purposes. To get relevant data on the dynamics of the mammal populations it is important to estimate the abundance and variations over time. Data achieved can be used to specifically monitor endangered species (like wolf, Canis lupus, and otter, Lutra lutra), detect effects from e.g. drilling activities on populations (important to hunters) and be used for assessment programs (MKB). One of the major goals is to monitor populations over several years and to obtain information that is essential for modelling of energy/carbon flows in the biosphere and ultimately calculations of the risks of exposure to radionuclide. From late 2001 to late spring 2002 a pilot study was accomplished in the areas surrounding the suggested areas in the Tierp region and in Forsmark (Oskarshamn was not included in this pilot study). A reference area was chosen near the coast some 20 km north of Forsmark. The aim was to initiate surveys of most of the larger mammal species that were expected to be found in the region. Selected species were wolf, lynx, otter, marten, mink, red fox, beaver, wild boar, red deer, roe deer, moose, European hare and mountain hare. Several methods were used and adapted to expected habitat use and expected local density of the species. Line transects were used on snow to index (frequency of tracks crossing the transects) or calculate actual number (for example the Buffon method). Pellet counts were used in spring to calculate hare and cervid (moose and deer species) density. In mid winter an aerial (helicopter) survey was conducted along the coast to count moose. The aquatic mammals were tracked on snow along selected parts of the streams and

  14. Potential disease agents in domestic goats and relevance to bighorn sheep (Ovis canadensis) management.

    Science.gov (United States)

    Drew, Mark L; Weiser, Glen C

    2017-01-01

    Domestic goats are raised for meat, milk and hair production, in herds for rangeland weed control, and as pack animals. Domestic sheep, goats and wild bighorn sheep are all susceptible to a multifactorial pneumonia. We sampled 43 herd goats from 7 herds and 48 pack goats from 11 herds for viral and bacterial serology, parasitology, and Pasteurellaceae microbiology. The goats in this study were in generally good health, although most goats did harbor various pathogens and parasites including several bacteria, specifically Pasteurellaceae, which have been associated with pneumonia in free-ranging bighorn sheep. It is not known if domestic goats can transmit the Pasteurellaceae or other pathogens found in this study readily to wild bighorn sheep. However, due the possibility of transmission, domestic goats in areas in or near bighorn sheep habitat should be managed to minimize the risk of spreading disease agents to bighorn sheep.

  15. Potential disease agents in domestic goats and relevance to bighorn sheep (Ovis canadensis) management

    OpenAIRE

    Drew, Mark L.; Weiser, Glen C.

    2017-01-01

    Domestic goats are raised for meat, milk and hair production, in herds for rangeland weed control, and as pack animals. Domestic sheep, goats and wild bighorn sheep are all susceptible to a multifactorial pneumonia. We sampled 43 herd goats from 7 herds and 48 pack goats from 11 herds for viral and bacterial serology, parasitology, and Pasteurellaceae microbiology. The goats in this study were in generally good health, although most goats did harbor various pathogens and parasites including s...

  16. Use of Exposure History to Identify Patterns of Immunity to Pneumonia in Bighorn Sheep (Ovis canadensis)

    OpenAIRE

    Plowright, Raina K.; Manlove, Kezia; Cassirer, E. Frances; Cross, Paul C.; Besser, Thomas E.; Hudson, Peter J.

    2013-01-01

    Individual host immune responses to infectious agents drive epidemic behavior and are therefore central to understanding and controlling infectious diseases. However, important features of individual immune responses, such as the strength and longevity of immunity, can be challenging to characterize, particularly if they cannot be replicated or controlled in captive environments. Our research on bighorn sheep pneumonia elucidates how individual bighorn sheep respond to infection with pneumoni...

  17. Potential disease agents in domestic goats and relevance to bighorn sheep (Ovis canadensis management.

    Directory of Open Access Journals (Sweden)

    Mark L Drew

    Full Text Available Domestic goats are raised for meat, milk and hair production, in herds for rangeland weed control, and as pack animals. Domestic sheep, goats and wild bighorn sheep are all susceptible to a multifactorial pneumonia. We sampled 43 herd goats from 7 herds and 48 pack goats from 11 herds for viral and bacterial serology, parasitology, and Pasteurellaceae microbiology. The goats in this study were in generally good health, although most goats did harbor various pathogens and parasites including several bacteria, specifically Pasteurellaceae, which have been associated with pneumonia in free-ranging bighorn sheep. It is not known if domestic goats can transmit the Pasteurellaceae or other pathogens found in this study readily to wild bighorn sheep. However, due the possibility of transmission, domestic goats in areas in or near bighorn sheep habitat should be managed to minimize the risk of spreading disease agents to bighorn sheep.

  18. Suspected fusariomycotoxicosis in sandhill cranes (Grus canadensis): clinical and pathological findings.

    Science.gov (United States)

    Roffe, Thomas J.; Stroud, Richard K.; Windingstad, Ronald M.

    1989-01-01

    In 1985 and 1986, large-scale natural die-offs of sandhill cranes in Texas were attributed to fusariomycotoxicosis. These birds demonstrated a progressive loss of motor control to the neck, wings, and legs. Based on necropsy and/or histopathology of 31 cranes, the most common lesions involved skeletal muscle and included hemorrhages, granulomatous myositis, thrombosis, and vascular degeneration. Serum chemistry results revealed that levels of creatinine kinase, aspartate aminotransferase, and alanine aminotransferase were above published normals. However, only alanine aminotransferase was higher in clinically affected cranes than in normal cranes collected from the same area.

  19. The effect of ionizing irradiation on motion of cytoplasm in cells of Elodea canadensis

    International Nuclear Information System (INIS)

    Tordyiya, N.V.; Grodzyins'kij, D.M.; Danil'chenko, O.O.

    1999-01-01

    The effect of acute irradiation on the velocity of cytoplasm is investigated. It is shown that, for small doses, there is a strong nonlinearity between the velocity of cytoplasm and dose. The nonlinear behavior disappears with increasing a dose

  20. Modeling intrinsic potential for beaver (Castor canadensis) habitat to inform restoration and climate change adaptation

    Science.gov (United States)

    Dittbrenner, Benjamin J.; Pollack, Michael M.; Schilling, Jason W.; Olden, Julian D.; Lawler, Joshua J.; Torgersen, Christian E.

    2018-01-01

    Through their dam-building activities and subsequent water storage, beaver have the potential to restore riparian ecosystems and offset some of the predicted effects of climate change by modulating streamflow. Thus, it is not surprising that reintroducing beaver to watersheds from which they have been extirpated is an often-used restoration and climate-adaptation strategy. Identifying sites for reintroduction, however, requires detailed information about habitat factors—information that is not often available at broad spatial scales. Here we explore the potential for beaver relocation throughout the Snohomish River Basin in Washington, USA with a model that identifies some of the basic building blocks of beaver habitat suitability and does so by relying solely on remotely sensed data. More specifically, we developed a generalized intrinsic potential model that draws on remotely sensed measures of stream gradient, stream width, and valley width to identify where beaver could become established if suitable vegetation were to be present. Thus, the model serves as a preliminary screening tool that can be applied over relatively large extents. We applied the model to 5,019 stream km and assessed the ability of the model to correctly predict beaver habitat by surveying for beavers in 352 stream reaches. To further assess the potential for relocation, we assessed land ownership, use, and land cover in the landscape surrounding stream reaches with varying levels of intrinsic potential. Model results showed that 33% of streams had moderate or high intrinsic potential for beaver habitat. We found that no site that was classified as having low intrinsic potential had any sign of beavers and that beaver were absent from nearly three quarters of potentially suitable sites, indicating that there are factors preventing the local population from occupying these areas. Of the riparian areas around streams with high intrinsic potential for beaver, 38% are on public lands and 17% are on large tracts of privately-owned timber land. Thus, although there are a large number of areas that could be suitable for relocation and restoration using beavers, current land use patterns may substantially limit feasibility in these areas.

  1. Isolation of viable Toxoplasma gondii, molecular characterization, and seroprevalence in elk (Cervus canadensis) in Pennsylvania, USA

    Science.gov (United States)

    Toxoplasmosis is a worldwide zoonosis. The ingestion of uncooked/undercooked meat and consumption of water contaminated with Toxoplasma gondii oocysts excreted by felids are the main modes of transmission of this parasite. Thousands of wild cervids are hunted or killed in traffic accidents yearly bu...

  2. Metabolomic profiling of the nectars of Aquilegia pubescens and A. canadensis

    Science.gov (United States)

    To date, variation in nectar chemistry of flowering plants has not been studied in detail. Such variation exerts considerable influence on pollinator–plant interactions, as well as on flower traits that play important roles in the selection of a plant for visitation by specific pollinators. Over the...

  3. Modeling intrinsic potential for beaver (Castor canadensis) habitat to inform restoration and climate change adaptation.

    Science.gov (United States)

    Dittbrenner, Benjamin J; Pollock, Michael M; Schilling, Jason W; Olden, Julian D; Lawler, Joshua J; Torgersen, Christian E

    2018-01-01

    Through their dam-building activities and subsequent water storage, beaver have the potential to restore riparian ecosystems and offset some of the predicted effects of climate change by modulating streamflow. Thus, it is not surprising that reintroducing beaver to watersheds from which they have been extirpated is an often-used restoration and climate-adaptation strategy. Identifying sites for reintroduction, however, requires detailed information about habitat factors-information that is not often available at broad spatial scales. Here we explore the potential for beaver relocation throughout the Snohomish River Basin in Washington, USA with a model that identifies some of the basic building blocks of beaver habitat suitability and does so by relying solely on remotely sensed data. More specifically, we developed a generalized intrinsic potential model that draws on remotely sensed measures of stream gradient, stream width, and valley width to identify where beaver could become established if suitable vegetation were to be present. Thus, the model serves as a preliminary screening tool that can be applied over relatively large extents. We applied the model to 5,019 stream km and assessed the ability of the model to correctly predict beaver habitat by surveying for beavers in 352 stream reaches. To further assess the potential for relocation, we assessed land ownership, use, and land cover in the landscape surrounding stream reaches with varying levels of intrinsic potential. Model results showed that 33% of streams had moderate or high intrinsic potential for beaver habitat. We found that no site that was classified as having low intrinsic potential had any sign of beavers and that beaver were absent from nearly three quarters of potentially suitable sites, indicating that there are factors preventing the local population from occupying these areas. Of the riparian areas around streams with high intrinsic potential for beaver, 38% are on public lands and 17% are on large tracts of privately-owned timber land. Thus, although there are a large number of areas that could be suitable for relocation and restoration using beavers, current land use patterns may substantially limit feasibility in these areas.

  4. Potential disease agents in domestic goats and relevance to bighorn sheep (Ovis canadensis) management

    Science.gov (United States)

    Weiser, Glen C.

    2017-01-01

    Domestic goats are raised for meat, milk and hair production, in herds for rangeland weed control, and as pack animals. Domestic sheep, goats and wild bighorn sheep are all susceptible to a multifactorial pneumonia. We sampled 43 herd goats from 7 herds and 48 pack goats from 11 herds for viral and bacterial serology, parasitology, and Pasteurellaceae microbiology. The goats in this study were in generally good health, although most goats did harbor various pathogens and parasites including several bacteria, specifically Pasteurellaceae, which have been associated with pneumonia in free-ranging bighorn sheep. It is not known if domestic goats can transmit the Pasteurellaceae or other pathogens found in this study readily to wild bighorn sheep. However, due the possibility of transmission, domestic goats in areas in or near bighorn sheep habitat should be managed to minimize the risk of spreading disease agents to bighorn sheep. PMID:28282407

  5. ANALISIS DE LA DIVERSIDAD GENETICA DE DOS POBLACIONES DE BORREGO CIMARRON (Ovis canadensis mexicana EN MEXICO

    Directory of Open Access Journals (Sweden)

    Jose Abad-Zavaleta

    2010-10-01

    Full Text Available Se analizó la diversidad genética de dos poblaciones de borrego cimarrón, provenientes de la Isla Tiburón y del estado de Sonora (Sierra Cirios, Sierra el Viejo y Sierra el Encierro. A partir de muestras de sangre se extrajo ADN que se utilizó para amplificar un panel de seis loci microsatélites. El número de alelos promedio encontrados para los loci estudiados fue 8 para la población de la Isla y 7 para el estado Sonora. La heterocigosidad media esperada y los índices de información polimórfica (PIC fueron muy similares en las dos poblaciones, con valores de 0.716 y  0.732, 0.66 y 0.69, para la población de Sonora y la de Isla Tiburón, respectivamente. Ambas poblaciones se encuentran en desequilibrio Hardy-Weinberg debido a un exceso de homocigotos. El análisis molecular de varianza (AMOVA indica una baja diferenciación genética (FST = 0.059; P =0.0001. Los resultados de este trabajo muestran que es necesario establecer estrategias para monitorear y mantener la diversidad genética y pureza de la población de la Isla Tiburón. En el caso de  las poblaciones del estado de Sonora es necesario monitorearlas ampliando el número de muestra a fin de evaluar su variabilidad genética y determinar el manejo reproductivo más adecuado, para el apareamiento entre ejemplares.

  6. Interactive effects of pH, temperature and light during ammonia toxicity events in Elodea canadensis

    NARCIS (Netherlands)

    Netten, J.J.C.; Heide, van der T.; Smolders, A.J.P.

    2013-01-01

    Increased nutrient loading threatens many freshwater ecosystems. Elevated temperatures may increase the sensitivity to eutrophication in these ecosystems. Higher concentrations of possibly toxic reduced nitrogen (NHx) in the water layer may be expected as production and anaerobic breakdown rates

  7. Automated mass correction and data interpretation for protein open-access liquid chromatography-mass spectrometry.

    Science.gov (United States)

    Wagner, Craig D; Hall, John T; White, Wendy L; Miller, Luke A D; Williams, Jon D

    2007-02-01

    Characterization of recombinant protein purification fractions and final products by liquid chromatography-mass spectrometry (LC/MS) are requested more frequently each year. A protein open-access (OA) LC/MS system was developed in our laboratory to meet this demand. This paper compares the system that we originally implemented in our facilities in 2003 to the one now in use, and discusses, in more detail, recent enhancements that have improved its robustness, reliability, and data reporting capabilities. The system utilizes instruments equipped with reversed-phase chromatography and an orthogonal accelerated time-of-flight mass spectrometer fitted with an electrospray source. Sample analysis requests are accomplished using a simple form on a web-enabled laboratory information management system (LIMS). This distributed form is accessible from any intranet-connected company desktop computer. Automated data acquisition and processing are performed using a combination of in-house (OA-Self Service, OA-Monitor, and OA-Analysis Engine) and vendor-supplied programs (AutoLynx, and OpenLynx) located on acquisition computers and off-line processing workstations. Analysis results are then reported via the same web-based LIMS. Also presented are solutions to problems not addressed on commercially available, small-molecule OA-LC/MS systems. These include automated transforming of mass-to-charge (m/z) spectra to mass spectra and automated data interpretation that considers minor variants to the protein sequence-such as common post-translational modifications (PTMs). Currently, our protein OA-LC/MS platform runs on five LC/MS instruments located in three separate GlaxoSmithKline R&D sites in the US and UK. To date, more than 8000 protein OA-LC/MS samples have been analyzed. With these user friendly and highly automated OA systems in place, mass spectrometry plays a key role in assessing the quality of recombinant proteins, either produced at our facilities or bought from external

  8. Los felinos: ¿Una alternativa en estudios de toxicología genética?

    Directory of Open Access Journals (Sweden)

    Ana Zamora-Perez

    2008-06-01

    results and also lion (Panthera leo, yaguaroundi (Felis yagoaroundi, lynx (Lynx ruffus, jaguar (Panthera onca, puma (Puma concolor, tiger (Panthera tigris, ocelote (Felis padalis and leopard (Panthera pardus display spontaneous MNE, and with this characteristic this Family can be propose like a potential group to be used in toxicogenetic studies. Rev. Biol. Trop. 56 (2: 969-974. Epub 2008 June 30.

  9. SU-F-T-152: Experimental Validation and Calculation Benchmark for a Commercial Monte Carlo Pencil BeamScanning Proton Therapy Treatment Planning System in Heterogeneous Media

    Energy Technology Data Exchange (ETDEWEB)

    Lin, L; Huang, S; Kang, M; Ainsley, C; Simone, C; McDonough, J; Solberg, T [University of Pennsylvania, Philadelphia, PA (United States)

    2016-06-15

    Purpose: Eclipse AcurosPT 13.7, the first commercial Monte Carlo pencil beam scanning (PBS) proton therapy treatment planning system (TPS), was experimentally validated for an IBA dedicated PBS nozzle in the CIRS 002LFC thoracic phantom. Methods: A two-stage procedure involving the use of TOPAS 1.3 simulations was performed. First, Geant4-based TOPAS simulations in this phantom were experimentally validated for single and multi-spot profiles at several depths for 100, 115, 150, 180, 210 and 225 MeV proton beams, using the combination of a Lynx scintillation detector and a MatriXXPT ionization chamber array. Second, benchmark calculations were performed with both AcurosPT and TOPAS in a phantom identical to the CIRS 002LFC, with the exception that the CIRS bone/mediastinum/lung tissues were replaced with similar tissues that are predefined in AcurosPT (a limitation of this system which necessitates the two stage procedure). Results: Spot sigmas measured in tissue were in agreement within 0.2 mm of TOPAS simulation for all six energies, while AcurosPT was consistently found to have larger spot sigma (<0.7 mm) than TOPAS. Using absolute dose calibration by MatriXXPT, the agreements between profiles measurements and TOPAS simulation, and calculation benchmarks are over 97% except near the end of range using 2 mm/2% gamma criteria. Overdosing and underdosing were observed at the low and high density side of tissue interfaces, respectively, and these increased with increasing depth and decreasing energy. Near the mediastinum/lung interface, the magnitude can exceed 5 mm/10%. Furthermore, we observed >5% quenching effect in the conversion of Lynx measurements to dose. Conclusion: We recommend the use of an ionization chamber array in combination with the scintillation detector to measure absolute dose and relative PBS spot characteristics. We also recommend the use of an independent Monte Carlo calculation benchmark for the commissioning of a commercial TPS. Partially

  10. Effects of urbanization on carnivore species distribution and richness

    Science.gov (United States)

    Ordenana, Miguel A.; Crooks, Kevin R.; Boydston, Erin E.; Fisher, Robert N.; Lyren, Lisa M.; Siudyla, Shalene; Haas, Christopher D.; Harris, Sierra; Hathaway, Stacie A.; Turschak, Greta M.; Miles, A. Keith; Van Vuren, Dirk H.

    2010-01-01

    Urban development can have multiple effects on mammalian carnivore communities. We conducted a meta-analysis of 7,929 photographs from 217 localities in 11 camera-trap studies across coastal southern California to describe habitat use and determine the effects of urban proximity (distance to urban edge) and intensity (percentage of area urbanized) on carnivore occurrence and species richness in natural habitats close to the urban boundary. Coyotes (Canis latrans) and bobcats (Lynx rufus) were distributed widely across the region. Domestic dogs (Canis lupus familiaris), striped skunks (Mephitis mephitis), raccoons (Procyon lotor), gray foxes (Urocyon cinereoargenteus), mountain lions (Puma concolor), and Virginia opossums (Didelphis virginiana) were detected less frequently, and long-tailed weasels (Mustela frenata), American badgers (Taxidea taxus), western spotted skunks (Spilogale gracilis), and domestic cats (Felis catus) were detected rarely. Habitat use generally reflected availability for most species. Coyote and raccoon occurrence increased with both proximity to and intensity of urbanization, whereas bobcat, gray fox, and mountain lion occurrence decreased with urban proximity and intensity. Domestic dogs and Virginia opossums exhibited positive and weak negative relationships, respectively, with urban intensity but were unaffected by urban proximity. Striped skunk occurrence increased with urban proximity but decreased with urban intensity. Native species richness was negatively associated with urban intensity but not urban proximity, probably because of the stronger negative response of individual species to urban intensity.

  11. Rodent foraging is affected by indirect, but not by direct, cues of predation risk.

    Energy Technology Data Exchange (ETDEWEB)

    Orrock, John, L.; Danielson, Brent, J.; Brinkerhoff, R., Jory

    2004-01-01

    Behavioral Ecology Vol. 15 No. 3: 433 - 437 We used foraging trays to determine whether old field mice, Peromyscus polionotus , altered foraging in response to direct cues of predation risk (urine of native and nonnative predators) and indirect cues of predation risk (foraging microhabitat, precipitation, and moon illumination). The proportion of seeds remaining in each tray (a measure of the giving-up density [GUD]) was used to measure risk perceived by mice. Mice did not alter their GUD when presented with cues of native predators (bobcats, Lynx r ufus , and red foxes, Vulpes vulpes), recently introduced predators (coyotes, Canis latrans ), nonnative predators (ocelots, Leopardus pardalis ), a native herbivore (white-tailed deer, Odocoileus virginianus), or a water control. Rather, GUD was related to microhabitat: rodents removed more seeds from foraging trays sheltered beneath vegetative cover compared with exposed trays outside of cover. Rodents also removed more seeds during nights with precipitation and when moon illumination was low. Our results suggest that P. polionotus used indirect cues rather than direct cues to assess risk of vertebrate predation. Indirect cues may be more reliable than are direct scent cues for estimating risk from multiple vertebrate predators that present the most risk in open environments.

  12. Linux OS integrated modular avionics application development framework with apex API of ARINC653 specification

    Directory of Open Access Journals (Sweden)

    Anna V. Korneenkova

    2017-01-01

    Full Text Available The framework is made to provide tools to develop the integrated modular avionics (IMA applications, which could be launched on the target platform LynxOs-178 without modifying their source code. The framework usage helps students to form skills for developing modern modules of the avionics. In addition, students obtain deeper knowledge for the development of competencies in the field of technical creativity by using of the framework.The article describes the architecture and implementation of the Linux OS framework for ARINC653 compliant OS application development.The proposed approach reduces ARINC-653 application development costs and gives a unified tool to implement OS vendor independent code that meets specification. To achieve import substitution free and open-source Linux OS is used as an environment for developing IMA applications.The proposed framework is applicable for using as the tool to develop IMA applications and as the tool for development of the following competencies: the ability to master techniques of using software to solve practical problems, the ability to develop components of hardware and software systems and databases, using modern tools and programming techniques, the ability to match hardware and software tools in the information and automated systems, the readiness to apply the fundamentals of informatics and programming to designing, constructing and testing of software products, the readiness to apply basic methods and tools of software development, knowledge of various technologies of software development.

  13. Metabolism of Genipin in Rat and Identification of Metabolites by Using Ultraperformance Liquid Chromatography/Quadrupole Time-of-Flight Tandem Mass Spectrometry

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    Yue Ding

    2013-01-01

    Full Text Available The in vivo and in vitro metabolism of genipin was systematically investigated in the present study. Urine, plasma, feces, and bile were collected from rats after oral administration of genipin at a dose of 50 mg/kg body weight. A rapid and sensitive method using ultraperformance liquid chromatography coupled with electrospray ionization quadrupole time-of-flight tandem mass spectrometry (UPLC-Q/TOF MS was developed for analysis of metabolic profile of genipin in rat biological samples (urine, plasma, feces, and bile. A total of ten metabolites were detected and identified by comparing their fragmentation patterns with that of genipin using MetaboLynx software tools. On the basis of the chromatographic peak area, the sulfated and glucuronidated conjugates of genipin were identified as major metabolites. And the existence of major metabolites G1 and G2 was confirmed by the in vitro enzymatic study further. Then, metabolite G1 was isolated from rat bile by semipreparative HPLC. Its structure was unambiguously identified as genipin-1-o-glucuronic acid by comparison of its UV, IR, ESI-MS, 1H-NMR, and 13C-NMR spectra with conference. In general, genipin was a very active compound that would transform immediately, and the parent form of genipin could not be observed in rats biological samples. The biotransformation pathways of genipin involved demethylated, ring-opened, cysteine-conjugated, hydroformylated, glucuronidated, and sulfated transformations.

  14. PARTICULARITIES AND THREATS ON THE BIODIVERSITY FROM CROATIA

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    Andreea BĂLTĂREŢU

    2010-12-01

    Full Text Available Because it has a specific geographic position and it’s situated at the crossroads of several bio-geographical regions and as a result of its ecological characteristics, the climate and geo-morphological conditions, Croatia is one of the wealthiest countries from Europe concerning the biodiversity. The great variety of the territory, maritime and underground habitats has determined the existence of numerous species and subspecies, including a significant number of endemic species. Although the climate of Croatia has a great value, many of its components are threatened. The most important threats of wild species are losing the habitats and the degradation. Because of its shape and its position in Europe, Croatia has very rich landscape diversity. Croatia contains significant populations of many species that are threatened at the European level. These are connected to preserved large areas of their habitats. Vast mountain beech and fir forests are rich in bear, wolf and lynx populations. Large wetland complexes with alluvial forests are important breeding, the migration and wintering sites for European water birds and for wetland birds nesting in forests. The wealth of marine biodiversity, in combination with the immense diversity of islands and cliffs with endemic life forms, gives the Croatian coastal area international significance.

  15. Rapidly deteriorating course in Dutch hereditary spastic paraplegia type 11 patients

    Science.gov (United States)

    de Bot, Susanne T; Burggraaff, Rogier C; Herkert, Johanna C; Schelhaas, Helenius J; Post, Bart; Diekstra, Adinda; van Vliet, Reinout O; van der Knaap, Marjo S; Kamsteeg, Erik-Jan; Scheffer, Hans; van de Warrenburg, Bart P; Verschuuren-Bemelmans, Corien C; Kremer, Hubertus PH

    2013-01-01

    Although SPG11 is the most common complicated hereditary spastic paraplegia, our knowledge of the long-term prognosis and life expectancy is limited. We therefore studied the disease course of all patients with a proven SPG11 mutation as tested in our laboratory, the single Dutch laboratory providing SPG11 mutation analysis, between 1 January 2009 and 1 January 2011. We identified nine different SPG11 mutations, four of which are novel, in nine index patients. Eighteen SPG11 patients from these nine families were studied by means of a retrospective chart analysis and additional interview/examination. Ages at onset were between 4 months and 14 years; 39% started with learning difficulties rather than gait impairment. Brain magnetic resonance imaging showed a thin corpus callosum and typical periventricular white matter changes in the frontal horn region (known as the ‘ears-of the lynx'-sign) in all. Most patients became wheelchair bound after a disease duration of 1 to 2 decades. End-stage disease consisted of loss of spontaneous speech, severe dysphagia, spastic tetraplegia with peripheral nerve involvement and contractures. Several patients died of complications between ages 30 and 48 years, 3–4 decades after onset of gait impairment. Other relevant features during the disease were urinary and fecal incontinence, obesity and psychosis. Our study of 18 Dutch SPG11-patients shows the potential serious long-term consequences of SPG11 including a possibly restricted life span. PMID:23443022

  16. Postmortem evaluation of reintroduced migratory whooping cranes in eastern North America.

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    Cole, Gretchen A; Thomas, Nancy J; Spalding, Marilyn; Stroud, Richard; Urbanek, Richard P; Hartup, Barry K

    2009-01-01

    Reintroduction of endangered Whooping Cranes (Grus americana) in eastern North America has successfully established a migratory population between Wisconsin and Florida. Eighty birds (47 males, 33 females) were released between 2001 and 2006, and all birds were tracked following release with satellite and/or VHF monitoring devices. By the end of 2006, 17 deaths (12 males, five females) were recorded from this population. Postmortem findings and field data were evaluated for each bird to determine the cause of death. Causes included predation (n=8, 47%), trauma (n=2, 12%), and degenerative disease (n=1, 6%); the cause of death was undetermined for 35% (n=6) of the birds. Based on physical evidence, the primary predator of the birds was the bobcat (Lynx rufus). Limited roosting habitat availability or bird behavior were likely prime factors in the occurrence of predation. Traumatic injuries and mortality were caused by gunshot, electrical utility lines, and an unknown source. The lone case of degenerative disease was due to chronic exertional myopathy associated with translocation. Available postmortem testing did not indicate the presence of infectious disease in this limited sample.

  17. Urban landscapes can change virus gene flow and evolution in a fragmentation-sensitive carnivore

    Science.gov (United States)

    Fountain-Jones, Nicholas M.; Craft, Meggan E.; Funk, W. Chris; Kozakiewicz, Chris; Trumbo, Daryl; Boydston, Erin E.; Lyren, Lisa M.; Crooks, Kevin R.; Lee, Justin S.; VandeWoude, Sue; Carver, Scott

    2017-01-01

    Urban expansion has widespread impacts on wildlife species globally, including the transmission and emergence of infectious diseases. However, there is almost no information about how urban landscapes shape transmission dynamics in wildlife. Using an innovative phylodynamic approach combining host and pathogen molecular data with landscape characteristics and host traits, we untangle the complex factors that drive transmission networks of Feline Immunodeficiency Virus (FIV) in bobcats (Lynx rufus). We found that the urban landscape played a significant role in shaping FIV transmission. Even though bobcats were often trapped within the urban matrix, FIV transmission events were more likely to occur in areas with more natural habitat elements. Urban fragmentation also resulted in lower rates of pathogen evolution, possibly owing to a narrower range of host genotypes in the fragmented area. Combined, our findings show that urban landscapes can have impacts on a pathogen and its evolution in a carnivore living in one of the most fragmented and urban systems in North America. The analytical approach used here can be broadly applied to other host-pathogen systems, including humans.

  18. Roads influence movement and home ranges of a fragmentation-sensitive carnivore, the bobcat, in an urban landscape

    Science.gov (United States)

    Poessel, Sharon A; Boydston, Erin E.; Lyren, Lisa M.; Fisher, Robert N.; Burdett, Christopher L.; Alonso, Robert S.; Crooks, Kevin R.

    2014-01-01

    Roads in urbanized areas can impact carnivore populations by constraining their movements and increasing mortality. Bobcats (Lynx rufus) are felids capable of living in urban environments, but are sensitive to habitat fragmentation and, thus, useful indicators of landscape connectivity; in particular, bobcat habitat selection, movement, and mortality may be affected by roads. We analyzed movement patterns of 52 bobcats in southern California in three study sites and investigated: (1) how bobcats responded to two types of roads within their home ranges; (2) how they placed their home ranges with respect to roads within the study area; and (3) whether male and female bobcats differed in their behavioral responses to roads. Within home ranges, primary and secondary roads did not influence movements, but bobcats more frequently crossed secondary roads when road densities were higher within their home ranges, thus increasing mortality risk. However, road densities within each study site were several times higher than road densities within home ranges, suggesting bobcats selected against roaded areas in home-range placement. Male home ranges bordering roads were smaller than home ranges for other males, but male home ranges containing roads were larger than those without roads. Male bobcats also were more likely to cross roads than females, potentially reflecting larger male home range sizes. Our results suggest roads have important impacts on urban bobcats, with stronger effects on males than females, and continued efforts to mitigate the effects of roads on carnivores and other fragmentation-sensitive species would help promote connectivity conservation in urban systems.

  19. Scat removal: A source of bias in feces-related studies

    Science.gov (United States)

    Livingston, T.R.; Gipson, P.S.; Ballard, W.B.; Sanchez, D.M.; Krausman, P.R.

    2005-01-01

    Consumption of feces (coprophagy) may alter findings of dietary studies and population estimates based on fecal analyses, but its magnitude is poorly understood. We investigated seasonal incidence of scat removal on Fort Riley, Kansas, from January through December 2000. We placed feces from captive bobcats (Lynx rufus), captive coyotes (Canis latrans), and free-ranging coyotes randomly on tracking stations in forest and prairie landscapes to determine rates of scat removal by local wildlife. Rates of removal of feces from captive bobcats, captive coyotes, and free-ranging coyotes varied from 7% during spring to 50% during summer. We identified opossums (Didelphis virginiana) as the most common species present at stations where scat removal occurred. Feces may be an important seasonal source of food for opossums and may provide seasonal dietary supplements for other species. Other factors responsible for disturbance of feces included a woodrat (Neotoma floridana) caching coyote feces, removal of captive coyote feces by free-ranging coyotes accompanied by deposition of fresh feces, a bobcat burying a captive bobcat sample and depositing fresh feces, and rain storms. Dietary studies based on fecal analyses could be biased by scat removal, assuming that contents in feces are representative of the proportion of foods consumed.

  20. Trypanosoma cruzi strain TcIV infects raccoons from Illinois

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    Cailey Vandermark

    Full Text Available BACKGROUND The northern limits of Trypanosoma cruzi across the territory of the United States remain unknown. The known vectors Triatoma sanguisuga and T. lecticularia find their northernmost limits in Illinois; yet, earlier screenings of those insects did not reveal the presence of the pathogen, which has not been reported in vectors or reservoir hosts in this state. OBJECTIVES Five species of medium-sized mammals were screened for the presence of T. cruzi. METHODS Genomic DNA was isolated from heart, spleen and skeletal muscle of bobcats (Lynx rufus, n = 60, raccoons (Procyon lotor, n = 37, nine-banded armadillos (Dasypus novemcinctus, n = 5, Virginia opossums (Didelphis virginiana, n = 3, and a red fox (Vulpes vulpes. Infections were detected targeting DNA from the kinetoplast DNA minicircle (kDNA and satellite DNA (satDNA. The discrete typing unit (DTU was determined by amplifying two gene regions: the Spliced Leader Intergenic Region (SL, via a multiplex polymerase chain reaction, and the 24Sα ribosomal DNA via a heminested reaction. Resulting sequences were used to calculate their genetic distance against reference DTUs. FINDINGS 18.9% of raccoons were positive for strain TcIV; the rest of mammals tested negative. MAIN CONCLUSIONS These results confirm for the first time the presence of T. cruzi in wildlife from Illinois, suggesting that a sylvatic life cycle is likely to occur in the region. The analyses of sequences of SL suggest that amplicons resulting from a commonly used multiplex reaction may yield non-homologous fragments.