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Sample records for living stained calcareous

  1. Living (stained calcareous benthic foraminifera from recent sediments off Concepción, central-southern Chile (~36° S Foraminíferos bentónicos calcáreos vivos (teñidos en sedimentos recientes de Concepción, Chile centro-sur (~36° S

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    RAÚL TAPIA

    2008-09-01

    Full Text Available This study examines onshore-offshore and vertical distribution of living (Rose Bengal stained benthic foraminifera (> 180 μm fraction from three sediment stations along a bathymetric transect off Concepción, Chile (station 18 = 88 m water depth, station 26 = 120 m, station 40 = 1,030 m, within and below the oxygen minimum zone. All cores were collected in austral winter. Calcareous foraminifera dominated the three stations. The species composition, living foraminifera density, and vertical distribution patterns within the sediment changed in accordance with bottom water dissolved oxygen concentration and food availability. Onshore-offshore pattern revealed overall highest living foraminiferal densities at shelf stations 18 and 26 where bottom water dissolved oxygen was lowest (~ 0.2 mL-1 and content in labile organic matter highest. Within the sediment, maximum relative abundances (50-60 % of living organisms were found in the 0-1 cm interval at the organic-rich and oxygen-poor shelf stations 18 and 26. In the well-oxygenated (2.7 mL-1 slope station 40, 70 % of living foraminifera were observed deeper than the first centimeter. The number of species and the contribution of the > 250 μm fraction to the total fauna larger than 180 μm increased offshore. Nonionella auris (d'Orbigny dominated at stations 18 and 26 while a more diverse foraminifera fauna was found at station 40. This study provides the first quantitative data on living benthic foraminifera in the area; seasonal and interannual changes are not addressed.Este estudio examina la distribución costa-océano y vertical de los foraminíferos bentónicos calcáreos (fracción > 180 im vivos (teñidos en tres estaciones a lo largo de un transecto batimétrico frente al área de Concepción, Chile (estación 18 = 88 m, estación 26 = 120 m, estación 40 = 1.030 m de profundidad, dentro y bajo la zona mínima de oxígeno. Todos los testigos de sedimento fueron recolectados durante el per

  2. Confusion over live/dead stainings for the detection of vital microorganisms in oral biofilms--which stain is suitable?

    Science.gov (United States)

    Netuschil, Lutz; Auschill, Thorsten M; Sculean, Anton; Arweiler, Nicole B

    2014-01-11

    There is confusion over the definition of the term "viability state(s)" of microorganisms. "Viability staining" or "vital staining techniques" are used to distinguish live from dead bacteria. These stainings, first established on planctonic bacteria, may have serious shortcomings when applied to multispecies biofilms. Results of staining techniques should be compared with appropriate microbiological data. Many terms describe "vitality states" of microorganisms, however, several of them are misleading. Authors define "viable" as "capable to grow". Accordingly, staining methods are substitutes, since no staining can prove viability.The reliability of a commercial "viability" staining assay (Molecular Probes) is discussed based on the corresponding product information sheet: (I) Staining principle; (II) Concentrations of bacteria; (III) Calculation of live/dead proportions in vitro. Results of the "viability" kit are dependent on the stains' concentration and on their relation to the number of bacteria in the test. Generally this staining system is not suitable for multispecies biofilms, thus incorrect statements have been published by users of this technique.To compare the results of the staining with bacterial parameters appropriate techniques should be selected. The assessment of Colony Forming Units is insufficient, rather the calculation of Plating Efficiency is necessary. Vital fluorescence staining with Fluorescein Diacetate and Ethidium Bromide seems to be the best proven and suitable method in biofilm research.Regarding the mutagenicity of staining components users should be aware that not only Ethidium Bromide might be harmful, but also a variety of other substances of which the toxicity and mutagenicity is not reported. - The nomenclature regarding "viability" and "vitality" should be used carefully.- The manual of the commercial "viability" kit itself points out that the kit is not suitable for natural multispecies biofilm research, as supported by an

  3. Comparison between morphological and staining characteristics of live and dead eggs of Schistosoma mansoni

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    AK Sarvel

    2006-10-01

    Full Text Available Schistosoma mansoni eggs are classified, according to morphological characteristics, as follows: viable mature and immature eggs; dead mature and immature eggs, shells and granulomas. The scope of this study was to compare the staining characteristics of different morphological types of eggs in the presence of fluorescent labels and vital dyes, aiming at differentiating live and dead eggs. The eggs were obtained from the intestines of infected mice, and put into saline 0.85%. The fluorescent labels were Hoechst 33258 and Acridine Orange + Ethidium Bromide and vital dyes (Trypan Blue 0.4% and Neutral Red 1%. When labelled with the probe Hoechst 33258, some immature eggs, morphologically considered viable, presented fluorescence (a staining characteristic detected only in dead eggs; mature eggs did not present fluorescence, and the other types of dead eggs, morphologically defined, showed fluorescence. As far as Acridine Orange + Ethidium Bromide are concerned, either the eggs considered to be live, or the dead ones, presented staining with green color, and only the hatched and motionless miracidium was stained with an orange color. Trypan Blue was not able to stain the eggs, considered to be dead but only dead miracidia which had emerged out of the shell. Neutral Red stained both live and dead eggs. Only the fluorescent Hoechst 33258 can be considered a useful tool for differentiation between dead and live eggs.

  4. Combination of Small Molecule Microarray and Confocal Microscopy Techniques for Live Cell Staining Fluorescent Dye Discovery

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    Attila Bokros

    2013-08-01

    Full Text Available Discovering new fluorochromes is significantly advanced by high-throughput screening (HTS methods. In the present study a combination of small molecule microarray (SMM prescreening and confocal laser scanning microscopy (CLSM was developed in order to discover novel cell staining fluorescent dyes. Compounds with high native fluorescence were selected from a 14,585-member library and further tested on living cells under the microscope. Eleven compartment-specific, cell-permeable (or plasma membrane-targeted fluorochromes were identified. Their cytotoxicity was tested and found that between 1–10 micromolar range, they were non-toxic even during long-term incubations.

  5. LIVE/DEAD YEAST VIABILITY STAINING AS A TOOL FOR IMPROVING ARTISANAL PILSNER BEER PRODUCTION

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    Benedetta Bottari

    2014-10-01

    Full Text Available The production of an artisanal beer, made by brewers using traditional practices on a small scale, is founded on the empirical adjustment of parameters, including yeasts handling and serial repitching. The aim of this study was to monitor yeast viability during different stages of artisanal beer productions through the Live/Dead Yeast viability staining and to correlate it with fermentation dynamics in order to increase process standardization and to maintain the quality of final products. Yeast viability and fermentation activities were evaluated during seven fermentation cycles of an artisanal pilsner beer. Yeast inoculated with higher viability performed generally better in fermentation, resulting in faster sugar consumption, faster ethanol production and stability. Handling yeast and serial repitching based on Live/Dead viability measurements, could be the key way to ensure reliable manufacture of high quality beer and to improve process standardization particularly for microbreweries, where variability of production can be a challenging point.

  6. Classification of phytoplankton cells as live or dead using the vital stains fluorescein diacetate and 5-chloromethylfluorescein diacetate.

    Science.gov (United States)

    MacIntyre, Hugh L; Cullen, John J

    2016-08-01

    Regulations for ballast water treatment specify limits on the concentrations of living cells in discharge water. The vital stains fluorescein diacetate (FDA) and 5-chloromethylfluorescein diacetate (CMFDA) in combination have been recommended for use in verification of ballast water treatment technology. We tested the effectiveness of FDA and CMFDA, singly and in combination, in discriminating between living and heat-killed populations of 24 species of phytoplankton from seven divisions, verifying with quantitative growth assays that uniformly live and dead populations were compared. The diagnostic signal, per-cell fluorescence intensity, was measured by flow cytometry and alternate discriminatory thresholds were defined statistically from the frequency distributions of the dead or living cells. Species were clustered by staining patterns: for four species, the staining of live versus dead cells was distinct, and live-dead classification was essentially error free. But overlap between the frequency distributions of living and heat-killed cells in the other taxa led to unavoidable errors, well in excess of 20% in many. In 4 very weakly staining taxa, the mean fluorescence intensity in the heat-killed cells was higher than that of the living cells, which is inconsistent with the assumptions of the method. Applying the criteria of ≤5% false negative plus ≤5% false positive errors, and no significant loss of cells due to staining, FDA and FDA+CMFDA gave acceptably accurate results for only 8-10 of 24 species (i.e., 33%-42%). CMFDA was the least effective stain and its addition to FDA did not improve the performance of FDA alone. © 2016 The Authors. Journal of Phycology published by Wiley Periodicals, Inc. on behalf of Phycological Society of America.

  7. Selenium Incorporated Cationic Organochalcogen: Live Cell Compatible and Highly Photostable Molecular Stain for Imaging and Localization of Intracellular DNA.

    Science.gov (United States)

    Gaur, Pankaj; Kumar, Ajay; Dey, Gourab; Kumar, Rajendra; Bhattacharyya, Shalmoli; Ghosh, Subrata

    2016-05-04

    Successful integration of selenium unit into a newly designed cationic chemical architecture led to the development of a highly photostable molecular maker PA5 to be used in fluorescence microscopy as cellular nucleus staining agent for longer duration imaging under continuous laser illumination. Adaptation of a targeted single-atom modification strategy led to the development of a series of proficient DNA light-up probes (PA1-PA5). Further, their comparative photophysical studies in the presence of DNA revealed the potential of electron rich heteroatoms of chalcogen family in improving binding efficiency and specificity of molecular probes toward DNA. The findings of cell studies confirmed the outstanding cell compatibility of probe PA5 in terms of cell permeability, biostability, and extremely low cytotoxicity. Moreover, the photostability experiment employing continuous laser illumination in solution phase as well as in cell assay (both fixed and live cells) revealed the admirable photobleaching resistance of PA5. Finally, while investigating the phototoxicity of PA5, the probe was found not to exhibit light-induced toxicity even when irradiated for longer duration. All these experimental results demonstrated the promising standing of PA5 as a futuristic cell compatible potential stain for bioimaging and temporal profiling of DNA.

  8. Liquefaction resistance of calcareous sands

    International Nuclear Information System (INIS)

    Sandoval Vallejo, Eimar

    2012-01-01

    Calcareous sands are unique in terms of their origin, mineralogy, shape, fragility and intra particle porosity. This article presents results from an experimental program carried out to study the liquefaction resistance of a calcareous sand retrieved from Cabo Rojo at Puerto Rico. The experimental program included mineralogical characterization, index properties, and undrained cyclic triaxial tests on isotropically consolidated reconstituted samples. Due to the large variation in the calcareous sand properties, results are compared with previous researches carried out on other calcareous sands around the world. Results showed a wide range in the liquefaction resistance of the studied calcareous sands. Cabo Rojo sand experienced greater liquefaction resistance than most of the calcareous sands used for comparison. Important differences in the excess pore pressure generation characteristics were also found.

  9. The development of fluorescence turn-on probe for Al(III) sensing and live cell nucleus-nucleoli staining

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    Saini, Anoop Kumar; Sharma, Vinay; Mathur, Pradeep; Shaikh, Mobin M.

    2016-10-01

    The morphology of nucleus and nucleolus is powerful indicator of physiological and pathological conditions. The specific staining of nucleolus recently gained much attention due to the limited and expensive availability of the only existing stain “SYTO RNA-Select”. Here, a new multifunctional salen type ligand (L1) and its Al3+ complex (1) are designed and synthesized. L1 acts as a chemosensor for Al3+ whereas 1 demonstrates specific staining of nucleus as well as nucleoli. The binding of 1 with nucleic acid is probed by DNase and RNase digestion in stained cells. 1 shows an excellent photostability, which is a limitation for existing nucleus stains during long term observations. 1 is assumed to be a potential candidate as an alternative to expensive commercial dyes for nucleus and nucleoli staining.

  10. Calcareous Fens - Source Feature Points

    Data.gov (United States)

    Minnesota Department of Natural Resources — Pursuant to the provisions of Minnesota Statutes, section 103G.223, this database contains points that represent calcareous fens as defined in Minnesota Rules, part...

  11. CellTracker Green labelling vs. rose bengal staining: CTG wins by points in distinguishing living from dead anoxia-impacted copepods and nematodes

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    M. Grego

    2013-07-01

    Full Text Available Hypoxia and anoxia have become a key threat to shallow coastal seas. Much is known about their impact on macrofauna, less on meiofauna. In an attempt to shed more light on the latter group, in particular from a process-oriented view, we experimentally induced short-term anoxia (1 week in the northern Adriatic Sea (Mediterranean and examined the two most abundant meiofauna taxa – harpacticoid copepods and nematodes. Both taxa also represent different ends of the tolerance spectrum, with copepods being the most sensitive and nematodes among the most tolerant. We compared two methods: CellTracker Green (CTG – new labelling approach for meiofauna – with the traditional rose bengal (RB staining method. CTG binds to active enzymes and therefore colours live organisms only. The two methods show considerable differences in the number of living and dead individuals of both meiofauna taxa. Generally, RB will stain dead but not yet decomposed copepods and nematodes equally as it does live ones. Specifically, RB significantly overestimated the number of living copepods in all sediment layers in anoxic samples, but not in any normoxic samples. In contrast, for nematodes, the methods did not show such a clear difference between anoxia and normoxia. RB overestimated the number of living nematodes in the top sediment layer of normoxic samples, which implies an overestimation of the overall live nematofauna. For monitoring and biodiversity studies, the RB method might be sufficient, but for more precise quantification of community degradation, especially after an oxygen depletion event, CTG labelling is a better tool. Moreover, it clearly highlights the surviving species within the copepod or nematode community. As already accepted for foraminiferal research, we demonstrate that the CTG labelling is also valid for other meiofauna groups.

  12. Gram staining.

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    Coico, Richard

    2005-10-01

    Named after Hans Christian Gram who developed the method in 1884, the Gram stain allows one to distinguish between Gram-positive and Gram-negative bacteria on the basis of differential staining with a crystal violet-iodine complex and a safranin counterstain. The cell walls of Gram-positive organisms retain this complex after treatment with alcohol and appear purple, whereas gram-negative organisms decolorize following such treatment and appear pink. The method described here is useful for assessing bacterial contamination of tissue culture samples or for examining the Gram stain status and morphological features of bacteria isolated from mixed or isolated bacterial cultures.

  13. Flow cytometric readout based on Mitotracker Red CMXRos staining of live asexual blood stage malarial parasites reliably assesses antibody dependent cellular inhibition

    DEFF Research Database (Denmark)

    Jogdand, Prajakta S; Singh, Susheel K; Christiansen, Michael

    2012-01-01

    asynchronous and tightly synchronized asexual blood stage cultures of Plasmodium falciparum were stained with CMXRos and subjected to detection by flow cytometry and fluorescence microscopy. The parasite counts obtained by flow cytometry were compared to standard microscopic counts obtained through examination......ABSTRACT: BACKGROUND: Functional in vitro assays could provide insights into the efficacy of malaria vaccine candidates. For estimating the anti-parasite effect induced by a vaccine candidate, an accurate determination of live parasite count is an essential component of most in vitro bioassays....... Although traditionally parasites are counted microscopically, a faster, more accurate and less subjective method for counting parasites is desirable. In this study mitochondrial dye (Mitotracker Red CMXRos) was used for obtaining reliable live parasite counts through flow cytometry. METHODS: Both...

  14. A blue fluorescent labeling technique utilizing micro- and nanoparticles for tracking in LIVE/DEAD® stained pathogenic biofilms of Staphylococcus aureus and Burkholderia cepacia

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    Klinger-Strobel M

    2016-02-01

    Full Text Available Mareike Klinger-Strobel,1,2,* Julia Ernst,3,* Christian Lautenschläger,4 Mathias W Pletz,1,2 Dagmar Fischer,3,5 Oliwia Makarewicz1,2 1Center for Infectious Diseases and Infection’s Control, 2Center for Sepsis Control and Care, Jena University Hospital, 3Department of Pharmaceutical Technology, Friedrich Schiller University Jena, 4Department of Internal Medicine IV, Jena University Hospital, 5Jena Center for Soft Matter (JCSM, Friedrich Schiller University Jena, Jena, Germany*These authors contributed equally to this work Abstract: Strategies that target and treat biofilms are widely applied to bacterial cultures using popular live/dead staining techniques with mostly red or green fluorescent markers (eg, with SYTO® 9, propidium iodide, fluorescein. Therefore, visualizing drugs or micro- and nanoparticulate delivery systems to analyze their distribution and effects in biofilms requires a third fluorescent dye that does not interfere with the properties of the live/dead markers. The present study establishes and evaluates a model for tracking polymeric particles in fluorescently stained biological material. To this end, poly(D,L-lactide-co-glycolide (PLGA-based micro- and nanoparticles were used as well-established model systems, which, because of their favorable safety profiles, are expected to play important future roles with regard to drug delivery via inhalation. PLGA was covalently and stably labeled with 7-amino-4-methyl-3-coumarinylacetic acid (AMCA, after which blue fluorescent poly(ethylene glycol-block-PLGA (PEG-PLGA particles were prepared using a mixture of fluorescent AMCA-PLGA and PEG-PLGA. Because chitosan is known to reduce negative surface charge, blue fluorescent PEG-PLGA-particles with chitosan were also prepared. These micro- and nanoparticles were physicochemically characterized and could be clearly distinguished from live/dead stained bacteria in biofilms using confocal laser scanning microscopy. Keywords: 7-amino-4

  15. The effects of α-cellulose extraction and blue-stain fungus on retrospective studies of carbon and oxygen isotope variation in live and dead trees.

    Science.gov (United States)

    English, Nathan B; McDowell, Nate G; Allen, Craig D; Mora, Claudia

    2011-10-30

    Tree-ring carbon and oxygen isotope ratios from live and recently dead trees may reveal important mechanisms of tree mortality. However, wood decay in dead trees may alter the δ(13)C and δ(18)O values of whole wood obscuring the isotopic signal associated with factors leading up to and including physiological death. We examined whole sapwood and α-cellulose from live and dead specimens of ponderosa pine (Pinus ponderosa), one-seed juniper (Juniperous monosperma), piñon pine (Pinus edulis) and white fir (Abies concolor), including those with fungal growth and beetle frass in the wood, to determine if α-cellulose extraction is necessary for the accurate interpretation of isotopic compositions in the dead trees. We found that the offset between the δ(13)C or δ(18)O values of α-cellulose and whole wood was the same for both live and dead trees across a large range of inter-annual and regional climate differences. The method of α-cellulose extraction, whether Leavitt-Danzer or Standard Brendel modified for small samples, imparts significant differences in the δ(13)C (up to 0.4‰) and δ(18) O (up to 1.2‰) of α-cellulose, as reported by other studies. There was no effect of beetle frass or blue-stain fungus (Ophiostoma) on the δ(13)C and δ(18)O of whole wood or α-cellulose. The relationships between whole wood and α-cellulose δ(13)C for ponderosa, piñon and juniper yielded slopes of ~1, while the relationship between δ(18)O of whole wood and α-cellulose was less clear. We conclude that there are few analytical or sampling obstacles to retrospective studies of isotopic patterns of tree mortality in forests of the western United States. Published in 2011 by John Wiley & Sons, Ltd.

  16. The effects of α-cellulose extraction and blue-stain fungus on retrospective studies of carbon and oxygen isotope variation in live and dead trees†

    Science.gov (United States)

    English, N.B.; McDowell, N.G.; Allen, Craig D.; Mora, C.

    2011-01-01

    Tree-ring carbon and oxygen isotope ratios from live and recently dead trees may reveal important mechanisms of tree mortality. However, wood decay in dead trees may alter the δ13C and δ18O values of whole wood obscuring the isotopic signal associated with factors leading up to and including physiological death. We examined whole sapwood and α-cellulose from live and dead specimens of ponderosa pine (Pinus ponderosa), one-seed juniper (Juniperous monosperma), piñon pine (Pinus edulis) and white fir (Abies concolor), including those with fungal growth and beetle frass in the wood, to determine if α-cellulose extraction is necessary for the accurate interpretation of isotopic compositions in the dead trees. We found that the offset between the δ13C or δ18O values of α-cellulose and whole wood was the same for both live and dead trees across a large range of inter-annual and regional climate differences. The method of α-cellulose extraction, whether Leavitt-Danzer or Standard Brendel modified for small samples, imparts significant differences in the δ13C (up to 0.4‰) and δ18O (up to 1.2‰) of α-cellulose, as reported by other studies. There was no effect of beetle frass or blue-stain fungus (Ophiostoma) on the δ13C and δ18O of whole wood or α-cellulose. The relationships between whole wood and α-cellulose δ13C for ponderosa, piñon and juniper yielded slopes of ~1, while the relationship between δ18O of whole wood and α-cellulose was less clear. We conclude that there are few analytical or sampling obstacles to retrospective studies of isotopic patterns of tree mortality in forests of the western United States.

  17. Earthworm introduction on calcareous minesoils

    International Nuclear Information System (INIS)

    Vimmerstedt, J.P.; Kost, D.A.

    1994-01-01

    Burrowing activity of the nightcrawler, Lumbricus terrestis (L.t.), incorporates organic matter into mineral soil while creating long-lasting macropores. Thus L.t. has potential as a biological means of improving physical and chemical properties of surface mined areas. Efforts to establish L.t. population on forested acidic or calcareous minesoils have been successful, but thus far have not been able to establish L.t. in grassland ecosystems on calcareous minesoils. In May, 1989, the authors put 11 clitellate L.t. under sphagnum moss on calcareous gray cast overburden on standard graded topsoil, or on ripped and disked topsoil. All soils had cover of agronomic grasses and legumes. They found no L.t. at the 24 points of inoculation during sampling in fall of 1990 with formalin extractant, although smaller species, Lumbricus rubellus and Dendrobaena spp., were found. At another location, in May, 1990, they put 25 clitellate L.t. at 16 points in grasslands growing on gray cast overburden. Using formalin extraction, they found no L.t. in May 1992 at these locations. Working in this same area in November, 1992, they released 10 clitellate L.t. at 16 points under 10 cm of moist Alnus glutinosa leaf litter. Careful examination of the surface inoculation points in spring and fall of 1993 did not show obvious signs of earthworm activity. Their next step will be to use Earthworm Inoculation Units (earthworm-minesoil microcosms containing L.t. adults, immatures, and cocoons) as the source of the new populations

  18. Environmental controls on the distribution of living (stained) benthic foraminifera on the continental slope in the Campos Basin area (SW Atlantic)

    Science.gov (United States)

    Yamashita, Cintia; Mello e Sousa, Silvia Helena de; Vicente, Thaisa Marques; Martins, Maria Virgínia; Nagai, Renata Hanae; Frontalini, Fabrizio; Godoi, Sueli Susana; Napolitano, Dante; Burone, Letícia; Carreira, Renato; Figueira, Rubens Cesar Lopes; Taniguchi, Nancy Kazumi; Rezende, Carlos Eduardo de; Koutsoukos, Eduardo Apostolos Machado

    2018-05-01

    Living (stained) benthic foraminifera from deep-sea stations in the Campos Basin, southeastern Brazilian continental margin, were investigated to understand their distribution patterns and ecology, as well as the oceanographic processes that control foraminiferal distribution. Sediments were collected from 1050 m to 1950 m of water depth during the austral winter of 2003, below the Intermediate Western Boundary Current (IWBC) and the Deep Water Boundary Current (DWBC). Based on statistical analysis, vertical flux of particulate organic matter and the grain size of sediment seem to be the main factors controlling the spatial distribution of benthic foraminifera. The middle slope (1050 m deep) is characterized by relatively high foraminiferal density and a predominance of phytodetritus-feeding foraminifera such as Epistominella exigua and Globocassidulina subglobosa. The occurrence of these species seems to reflect the Brazil Current System (BCS). The above-mentioned currents are associated with the relatively high vertical flux of particulate organic matter and the prevalence of sandy sediments, respectively. The lower slope (between 1350 and 1950 m of water depth) is marked by low foraminiferal density and assemblages composed of Bolivina spp. and Brizalina spp., with low particulate organic matter flux values, muddy sediments, and more refractory organic matter. The distribution of this group seems to be related to episodic fluxes of food particles to the seafloor, which are influenced by the BCS at the surface and are deposited under low deep current activity (DWBC).

  19. Differential staining of bacteria: gram stain.

    Science.gov (United States)

    Moyes, Rita B; Reynolds, Jackie; Breakwell, Donald P

    2009-11-01

    In 1884, Hans Christian Gram, a Danish doctor, developed a differential staining technique that is still the cornerstone of bacterial identification and taxonomic division. This multistep, sequential staining protocol separates bacteria into four groups based on cell morphology and cell wall structure: Gram-positive cocci, Gram-negative cocci, Gram-positive rods, and Gram-negative rods. The Gram stain is useful for assessing bacterial contamination of tissue culture samples or for examining the Gram stain status and morphological features of bacteria isolated from mixed or isolated bacterial cultures. (c) 2009 by John Wiley & Sons, Inc.

  20. Port-Wine Stains

    Science.gov (United States)

    ... Safe Videos for Educators Search English Español Port-Wine Stains KidsHealth / For Parents / Port-Wine Stains What's ... Manchas de vino de oporto What Are Port-Wine Stains? A port-wine stain is a type ...

  1. Transport of Calcareous Fragments by Reef Fishes.

    Science.gov (United States)

    Bardach, J E

    1961-01-13

    The weight of sand, coral scrapings, algal fragments, and other calcareous materials which pass through the intestines of reef fishes was calculated on a hectare-per-year basis. It was found that browsing omnivorous reef fishes which rely, in part, on a plant diet ingested and redeposited at least 2300 kg of such material on a 1-hectare study reef near Bermuda. Reasons are presented why this estimate, certainly in order of magnitude, should be applicable to coral reefs in general.

  2. Patellar calcar: MRI appearance of a previously undescribed anatomical entity

    International Nuclear Information System (INIS)

    Collins, Mark S.; Tiegs-Heiden, Christin A.; Stuart, Michael J.

    2014-01-01

    The femoral calcar is a constant anatomical structure within the proximal femur representing a condensation of bone trabeculae. It is our impression that a similar structure is present within the patella. The purpose of this retrospective study was to define the prevalence, appearance, location, and configuration of the patellar calcar on MRI examinations. One hundred consecutive unenhanced knee MRIs were retrospectively reviewed by two readers who were blinded to the clinical indication. The patellar calcar was defined as a dark signaling, linear or curvilinear structure subjacent to the patellar articular surface. If present, the patellar calcar was assigned to a ''well seen,'' ''moderately well seen,'' or ''faintly seen'' category. Location of the calcar within the patella, orientation, configuration, and thickness were recorded. Confounding variables, such as marrow edema, patellar chondromalacia, bipartite patella, or postoperative changes were also recorded. The patellar calcar was visualized in 81 out of 100 (81 %) MRIs. When detected, the calcar was well seen in 20 out of 81 (25 %), moderately well seen in 35 out of 81 (43 %), and faintly seen in 26 out of 81 (32 %). The anteroposterior width of the calcar measured at its thickest segment was: 1 mm in 10 out of 81 (12 %). The patellar calcar was seen in the majority of knee MRIs and had a consistent imaging appearance. The calcar may be obscured by degenerative arthrosis of the patella and rarely may mimic patellar stress fracture or osteochondritis dissecans. Radiologists and clinicians should be familiar with this normal anatomical structure. (orig.)

  3. Live Staining and Isolation of Specific Hormone-Producing Cells from Rat Anterior Pituitary by Cytochemistry with Lectins and Cholera Toxin B Subunit

    International Nuclear Information System (INIS)

    Kikuchi, Motoshi; Kusumoto, Kenji; Fujiwara, Ken; Takahashi, Kozue; Tando, Yukiko; Yashiro, Takashi

    2011-01-01

    Anterior pituitary glands contain five types of hormone-producing cells. Distinguishing and isolating specific types of living cells are essential for studying their function. Although many such attempts have been made, the results have been disappointing. In the present study, we labeled specific types of living hormone-producing cells by using potential differences in sugar chains on the cell surfaces. Cytochemical analysis with lectins and cholera toxin B subunit revealed that PNA, S-WGA, and cholera toxin B subunit recognized sugar chains specific to prolactin cells, ACTH cells, and GH cells, respectively, and that UEA-I recognized most of prolactin cells and GH cells. Next, fluorescence-activated cell sorting was used to isolate GH cells labeled by fluoresceinated cholera toxin B. The purity of the GH cell fraction estimated by immunocytochemistry and quantitative real-time PCR for cell type-specific genes was more than 98%, which was higher than that reported in earlier studies, including those using transgenic animals. We conclude that cytochemistry with lectins and cholera toxin B subunit is a straightforward, acceptable method of isolating specific types of anterior pituitary cells and that the cells isolated by this method can serve as useful materials in the study of anterior pituitary cells

  4. AE Test of Calcareous Sands with Particle Rushing

    Directory of Open Access Journals (Sweden)

    Tan Fengyi

    2017-08-01

    Full Text Available The particle of calcareous sands was forced to crush, then the energy from the crushing was released by the form of sound waves. Therefore the AE technique was used to detect the calcareous sands AE signal when it crushed. by to study the AE characteristics, the mechanics of calcareous sands was studied. Study showed that: (1 there was the AE activities on the low confining pressure condition at the beginnig of test, (2 there was more and more AE activities with the continuing of test until to the end, (3 the calcareous sands’ AE activities was on the whole testing, (4 the calcareous sands’ particle crushing and mutual friction played different roles for its AE activities. Then the AE model based on the calcarous sands’ particle crushing was discussed.

  5. leaves extracts as counter stain in gram staining reaction 56

    African Journals Online (AJOL)

    DR. AMINU

    is a stain with color contrasting to the principal stain, making the stained ... technology today, the Gram's staining method remains ... was aimed at employing the use of Henna leaves extract as ... fragrant, white or rose flowers in clusters. It is.

  6. Differential staining of bacteria: acid fast stain.

    Science.gov (United States)

    Reynolds, Jackie; Moyes, Rita B; Breakwell, Donald P

    2009-11-01

    Acid-fastness is an uncommon characteristic shared by the genera Mycobacterium (Section 10A) and Nocardia. Because of this feature, this stain is extremely helpful in identification of these bacteria. Although Gram positive, acid-fast bacteria do not take the crystal violet into the wall well, appearing very light purple rather than the deep purple of normal Gram-positive bacteria. (c) 2009 by John Wiley & Sons, Inc.

  7. Iron Stain on Wood

    Science.gov (United States)

    Mark Knaebe

    2013-01-01

    Iron stain, an unsightly blue–black or gray discoloration, can occur on nearly all woods. Oak, redwood, cypress, and cedar are particularly prone to iron stain because these woods contain large amounts of tannin-like extractives. The discoloration is caused by a chemical reaction between extractives in the wood and iron in steel products, such as nails, screws, and...

  8. Patellar calcar: MRI appearance of a previously undescribed anatomical entity

    Energy Technology Data Exchange (ETDEWEB)

    Collins, Mark S.; Tiegs-Heiden, Christin A. [Department of Radiology, Mayo Clinic, Rochester, Minnesota (United States); Stuart, Michael J. [Department of Orthopedic Surgery, Mayo Clinic, Rochester, Minnesota (United States)

    2014-02-15

    The femoral calcar is a constant anatomical structure within the proximal femur representing a condensation of bone trabeculae. It is our impression that a similar structure is present within the patella. The purpose of this retrospective study was to define the prevalence, appearance, location, and configuration of the patellar calcar on MRI examinations. One hundred consecutive unenhanced knee MRIs were retrospectively reviewed by two readers who were blinded to the clinical indication. The patellar calcar was defined as a dark signaling, linear or curvilinear structure subjacent to the patellar articular surface. If present, the patellar calcar was assigned to a ''well seen,'' ''moderately well seen,'' or ''faintly seen'' category. Location of the calcar within the patella, orientation, configuration, and thickness were recorded. Confounding variables, such as marrow edema, patellar chondromalacia, bipartite patella, or postoperative changes were also recorded. The patellar calcar was visualized in 81 out of 100 (81 %) MRIs. When detected, the calcar was well seen in 20 out of 81 (25 %), moderately well seen in 35 out of 81 (43 %), and faintly seen in 26 out of 81 (32 %). The anteroposterior width of the calcar measured at its thickest segment was: < 1 mm in 43 out of 81 (53 %), 1 mm in 28 out of 81 (35 %), and >1 mm in 10 out of 81 (12 %). The patellar calcar was seen in the majority of knee MRIs and had a consistent imaging appearance. The calcar may be obscured by degenerative arthrosis of the patella and rarely may mimic patellar stress fracture or osteochondritis dissecans. Radiologists and clinicians should be familiar with this normal anatomical structure. (orig.)

  9. Physical behaviour of Cretaceous calcareous nannofossil ooze

    DEFF Research Database (Denmark)

    Buls, Toms; Anderskouv, Kresten; Friend, Patrick L.

    2017-01-01

    Geomorphic features such as drifts, sediment waves and channels have been documented in the Upper Cretaceous of north-west Europe. These features are interpreted to result from bottom currents and have been used to refine chalk depositional models and quantify palaeocirculation patterns. Chalk...... was first deposited as calcareous nannofossil ooze and geomorphic features are the result of sediment reworking after deposition. There is limited knowledge on the processes that govern nannofossil ooze mobility, thus forcing uncertainty onto numerical models based on sedimentological observations...... of deposition thresholds (τcd) from ca 0·04 to 0·13 Pa reflects the influence of variable suspended sediment concentration and τ0 on settling particle size due to the identified potential for chalk ooze aggregation and flocculation. Additionally, deposition thresholds seem to be affected by the size of eroded...

  10. Port-wine stain

    Science.gov (United States)

    ... About MedlinePlus Show Search Search MedlinePlus GO GO About MedlinePlus Site Map FAQs Customer Support Health Topics Drugs & Supplements Videos & Tools Español You Are Here: Home → Medical Encyclopedia → Port-wine stain URL of this page: //medlineplus.gov/ency/ ...

  11. Stool Gram stain

    Science.gov (United States)

    ... stool sample. The Gram stain method is sometimes used to quickly diagnose bacterial infections. How the Test is Performed You will need to collect a stool sample. There are many ways to collect the sample. You can catch the stool on plastic wrap that is loosely placed over the toilet bowl ...

  12. Stained Glass and Flu

    Centers for Disease Control (CDC) Podcasts

    2017-02-01

    Dr. Robert Webster, an Emeritus member of the Department of Infectious Diseases at St. Jude Children's Research Hospital, discusses his cover art story on stained glass and influenza.  Created: 2/1/2017 by National Center for Emerging and Zoonotic Infectious Diseases (NCEZID).   Date Released: 2/1/2017.

  13. Modified Field's staining--a rapid stain for Trichomonas vaginalis.

    Science.gov (United States)

    Afzan, M Yusuf; Sivanandam, S; Kumar, G Suresh

    2010-10-01

    Trichomonas vaginalis, a flagellate protozoan parasite commonly found in the human genitourinary tract, is transmitted primarily by sexual intercourse. Diagnosis is usually by in vitro culture method and staining with Giemsa stain. There are laboratories that use Gram stain as well. We compared the use of modified Field's (MF), Giemsa, and Gram stains on 2 axenic and xenic isolates of T. vaginalis, respectively. Three smears from every sediment of spun cultures of all 4 isolates were stained, respectively, with each of the stains. We showed that MF staining, apart from being a rapid stain (20 s), confers sharper staining contrast, which differentiates the nucleus and the cytoplasm of the organism when compared to Giemsa and Gram staining especially on parasites from spiked urine samples. The alternative staining procedure offers in a diagnostic setting a rapid stain that can easily visualize the parasite with sharp contrasting characteristics between organelles especially the nucleus and cytoplasm. Vacuoles are more clearly visible in parasites stained with MF than when stained with Giemsa. Copyright © 2010 Elsevier Inc. All rights reserved.

  14. Temporal variability of live (stained benthic foraminiferal faunas in a river-dominated shelf – Faunal response to rapid changes of the river influence (Rhône prodelta, NW Mediterranean

    Directory of Open Access Journals (Sweden)

    E. Legrand

    2012-04-01

    Full Text Available In the context of the French research project CHACCRA (Climate and Human-induced Alterations in Carbon Cycling at the River-seA connection, living (rose Bengal-stained benthic foraminifera were investigated at two stations (24 and 67 m depth in the Rhône prodelta (NW Mediterranean, Gulf of Lions. The aim of this study was to precise the response of benthic foraminiferal faunas to temporal changes of the Rhône River inputs (e.g. organic and terrigeneous material. Each site was sampled in April 2007, September 2007, May 2008 and December 2008, permitting to observe foraminiferal faunas of the 63–150 and >150 μm size fractions under a wide range of environmental conditions. Obvious variations in foraminiferal faunal composition were observed during the four investigated periods at the shallowest Station A located in the close vicinity of the Rhône River mouth. After major Rhône River flood events, different colonisation stages were observed with foraminiferal faunas responding with an opportunistic strategy few days to weeks after the creation of a peculiar sedimentary environment (Leptohalysis scottii, May 2008 or high organic matter supplies (Ammonia tepida, December 2008. Under more stable conditions, relatively diverse and equilibrated faunas grew in the sediments. Species benefited from noticeable input of riverine phytodetritus to the sediment during spring bloom conditions (April 2007; e.g. Bolivina dilatata, Nonionella stella, Stainforthia fusiformis, or high amounts of still bio-available organic matter under more oligotrophic conditions (September 2007; e.g. Ammonia tepida, Psammosphaera fusca. The reduced influence of the Rhône River input at the farther Station N led to less contrasted environmental conditions during the four sampling periods, and so to less obvious variations in foraminiferal faunal composition. During reduced riverine influence (i.e. low Rhône discharge, species able to feed on fresh phytodetritus (e

  15. Fragmentation, Fusion, and Genetic Homogeneity in a Calcareous Sponge (Porifera, Calcarea).

    Science.gov (United States)

    Padua, André; Leocorny, Pedro; Custódio, Márcio Reis; Klautau, Michelle

    2016-06-01

    Sessile marine invertebrates living on hard substrata usually present strategies such as size variations, longer life spans, fragmentation and fusion to occupy and compete for space. Calcareous sponges are usually small and short-lived, and some species are known to undergo frequent fragmentation and fusion events. However, whether fusion occurs only between genetically identical individuals remains unclear. We investigated the occurrence of chimaeras in the calcareous sponge Clathrina aurea by following the dynamics of fragmentation and fusion of 66 individuals in the field for up to 18 months and determined size variations and the life span of each individual. Microsatellites were used to determine whether fusion events occur among genetically different individuals. Growth and shrinkage of individuals were frequently observed, showing that size cannot be associated with age in C. aurea. The life span of the species ranged from 1 to 16 months (mean: 4.7 months). Short life spans and variable growth rates have been observed in other species of the class Calcarea. Fragmentation and fusion events were observed, but fusion events always occurred between genetically identical individuals, as has been suggested by graft experiments in adult Demospongiae and other Calcarea. These results suggest that at least C. aurea adults may have some mechanism to avoid chimaerism. © 2016 Wiley Periodicals, Inc.

  16. Laser Treatment of Port Wine Stains

    Science.gov (United States)

    Majaron, Boris; Nelson, J. Stuart

    Port wine stain (PWS), also called nevus flammeus, is a congenital, cutaneous vascular malformation involving post-capillary venules which produce a light pink to red to dark-red-violet discoloration of human skin [1]. PWS occurs in an estimated 3 children per 1000 live births, affecting males and females and all racial groups equally [2]. There appears to be no hereditary predilection for PWS within families. There are no known risk factors or ways to prevent PWS.

  17. Endogenous and bioaugmented sulphate reduction in calcareous gypsiferous soils

    NARCIS (Netherlands)

    Alfaya, F.; Cuenca-Sanchez, M.; Garcia-Orenes, F.; Lens, P.N.L.

    2009-01-01

    Gypsiferous soils have a high agricultural value, but their utilization is limited by the presence of gypsum that can induce hardpan and vertical crusting. This paper reports on sulphate reduction in this soil type as a basis of a bioremediation technology to remove the gypsum content of calcareous

  18. Highly calcareous lacustrine soils in the Great Konya Basin, Turkey

    NARCIS (Netherlands)

    Meester, de T.

    1971-01-01

    The Great Konya Basin is in the south of the Central Anatolian Plateau in Turkey. It is a depression without outlet to the sea. The central part of the Basin is the floor of a former Pleistocene lake, the Ancient Konya Lake. This area, called the Lacustrine
    Plain, has highly calcareous

  19. The Use of AIS Data for Identifying and Mapping Calcareous Soils in Western Nebraska

    Science.gov (United States)

    Samson, S. A.

    1985-01-01

    The identification of calcareous soils, through unique spectral responses of the vegetation to the chemical nature of calcareous soils, can improve the accuracy of delineating the boundaries of soil mapping units over conventional field techniques. The objective of this experiment is to evaluate the use of the Airborne Imaging Spectrometer (AIS) in the identification and delineation of calcareous soils in the western Sandhills of Nebraska. Based upon statistical differences found in separating the spectral curves below 1.3 microns, calcareous and non-calcareous soils may be identified by differences in species of vegetation. Additional work is needed to identify biogeochemical differences between the two soils.

  20. Assessment of the Hindlimb Membrane Musculature of Bats: Implications for Active Control of the Calcar.

    Science.gov (United States)

    Stanchak, Kathryn E; Santana, Sharlene E

    2018-03-01

    The striking postcranial anatomy of bats reflects their specialized ecology; they are the only mammals capable of powered flight. Bat postcranial adaptations include a series of membranes that connect highly-modified, or even novel, skeletal elements. While most studies of bat postcranial anatomy have focused on their wings, bat hindlimbs also contain many derived and functionally important, yet less studied, features. In this study, we investigate variation in the membrane and limb musculature associated with the calcar, a neomorphic skeletal structure found in the hindlimbs of most bats. We use diffusible iodine-based contrast-enhanced computed tomography and standard histological techniques to examine the calcars and hindlimb membranes of three bat species that vary ecologically (Myotis californicus, a slow-flying insectivore; Molossus molossus, a fast-flying insectivore; and Artibeus jamaicensis, a slow-flying frugivore). We also assess the level of mineralization of the calcar at muscle attachment sites to better understand how muscle contraction may enable calcar function. We found that the arrangement of the calcar musculature varies among the three bat species, as does the pattern of mineral content within the calcar. M. molossus and M. californicus exhibit more complex calcar and calcar musculature morphologies than A. jamaicensis, and the degree of calcar mineralization decreases toward the tip of the calcar in all species. These results are consistent with the idea that the calcar may have a functional role in flight maneuverability. Anat Rec, 301:441-448, 2018. © 2018 Wiley Periodicals, Inc. © 2018 Wiley Periodicals, Inc.

  1. Say goodbye to coffee stains

    NARCIS (Netherlands)

    Eral, Burak; van den Ende, Henricus T.M.; Mugele, Friedrich Gunther

    2012-01-01

    Discussing ideas over a mug of coffee or tea is the lifeblood of science, but have you ever thought about the stains that can be inadvertently left behind? H Burak Eral, Dirk van den Ende and Frieder Mugele explain how these stains, which can be a major annoyance in some biology techniques, can be

  2. TL studies of calcareous rocks of Danta area, North Gujarat

    International Nuclear Information System (INIS)

    Limaye, M.A.; Desai, S.J.; Murthy, K.V.R.; Joshi, T.R.

    1992-01-01

    The lithounits exposed around Danta in Banaskantha district of North Gujarat belong to Ajabgarh Group, the upper division of the Delhi super group. These rocks are intruded by syn to late kinematic basic rocks and by Erinpura granites of post Delhi age. The Ajabgarh group consists of pelitic and calcareous components. Mineralogically the pelitic rocks comprise cordierite, almandine garnet, k-feldspar, sillimanite, quartz and mica in variable proportions. The calcareous rocks are seen to contain dominantly calcite, scapolite, forsterite, sphene, k-feldspar. These mineral assemblages correspond to upper Amphibolite to lower Granulite facies of regional metamorphism. The chemistry of the calcareous rocks show predominance of CaO over MgO. The glow curves obtained from virgin samples (NTL) as well as artificial beta irradiated indicate glow peaks at 140 o C, 290 o C, 310 o C and 390 o C. The TL glow peak temperatures are in general agreement with those reported by Borsi and Rinaldi and Medlin. The pronounced peak at 390 o C and 290 o C are suggestive of their high irradiation sensitivity and also probably reflect variation in the Mn content of the rocks. (author). 9 refs., 16 tabs., 2 figs

  3. Distribution characteristics of Shihongtan uranium deposits calcareous sandstone and discussion on their genesis

    International Nuclear Information System (INIS)

    Zhu Huanqiao; Jia Heng; Xu Gaozhong; Li Zhanyou

    2007-12-01

    It is considered that the calcareous sandstone appear at layer along of a bunch of pear lens on and off, localled near up and down surface of sandbody or washed surface, has sandstone of more macro-grain and more gradation through statistics and analysis of calcareous sandstone in goal layer in Shihongtan uranium deposits. The calcareous sandstone accumulation thickness chorogram demonstrated that the calcareous sandstone centralized distribution in the ore body growth area, thus it can be seen, in the oxidation reduction intermediate belt the calcareous sandstone forms with the uranium mine has the certain origin relation. Choropleth map of summed thickness of calcareous sandstone deserves that it mainly appear in area of uranium body and related cause of formation of ore body of interlayer deacidizing--oxidation belt. (authors)

  4. Discussion on distribution characteristics of calcareous sandstone in Shihongtan uranium deposit and its genesis

    International Nuclear Information System (INIS)

    Zhu Huanqiao; Qiao Haiming; Jia Heng; Xu Gaozhong

    2007-01-01

    Based on the observation and statistics on the calcareous sandstone in the ore host layer in Shihongtan uranium deposit, this paper finds that the calcareous sandstone occurs on and off near the top or wash surface of the sandbody as beads-strings lens along the layer and concentrates in the area where the ore bodies are rich. In lithology, the calcareous sandstone is of coarse grain and fairly well sorted. According to the analysis on the lithogeochemical features and the carbon and oxygen isotopes of calcareous sandstones, it is realized that there some genetic relation between the formation of calcareous sandstone and uranium mineralization in the oxidation-deoxidation transitional belt, that is the precipitation and enrichment of uranium is accompanied by the deposition of carbonate and formation of calcareous sandstone. (authors)

  5. Nucleic acid stains as indicators of Giardia muris viability following cyst inactivation.

    Science.gov (United States)

    Taghi-Kilani, R; Gyürék, L L; Millard, P J; Finch, G R; Belosevic, M

    1996-06-01

    A reliable viability assay for Giardia is required for the development of disinfection process design criteria and pathogen monitoring by water treatment utilities. Surveys of single-staining nucleic acid dyes (stain dead parasites only), and double-staining vital dye kits from Molecular Probes (stain live and dead parasites) were conducted to assess the viability of untreated, heat-killed, and chemically inactivated Giardia muris cysts. Nucleic acid staining results were compared to those of in vitro excystation and animal infectivity. Nucleic acid stain, designated as SYTO-9, was considered the best among the single-staining dyes for its ability to stain dead cysts brightly and its relatively slow decay rate of visible light emission following DNA binding. SYTO-9 staining was correlated to animal infectivity. A Live/Dead BacLight was found to be the better of 2 double-staining viability kits tested. Logarithmic survival ratios based on SYTO-9 and Live/Dead BacLight were compared to excystation and infectivity results for G. muris cysts exposed to ozone or free chlorine. The results indicate that SYTO-9 and Live/Dead BacLight staining is stable following treatment of cysts with chemical disinfectants.

  6. Effect of FYM on the recovery of applied zinc in DTPA extract under upland and submerged conditions in calcareous and non-calcareous soils

    International Nuclear Information System (INIS)

    Deb, D.L.; Leelabhai, K.S.

    1988-01-01

    Studies undertaken to determine the effect of varying levels of FYM application on the recovery of applied zinc in DTPA extract under upland and sub merged conditions in calcareous and non-calcareous soils using 65 Zn under controlled conditions showed that the recovery of fertilizer Zn was reduced significantly with high level of applied Zn and 5 cm standing water over the soil. Application of FYM also tended to reduce the percent recovery of applied Zn. The recovery of applied Zn was found to increase after 60 days (period of contact) in all the tretments. The calcareous soils showed significantly lower recovery of fertilizer Zn than non-calcareous soils. The interactions of 5 cm standing water with all the other factors studied on the recovery of applied Zn were highly significant and negative. (author). 8 refs., 3 tabs

  7. Long-term after-effects of fertilisation on restoration of calcareous grasslands

    NARCIS (Netherlands)

    Smits, N.A.C.; Bobbink, R.; Willems, J.H.

    2008-01-01

    Question: What are the long-term implications of former fertilisation for the ecological restoration of calcareous grasslands? Location: Gerendal, Limburg, The Netherlands. Methods: In 1970, ten permanent plots were established in just abandoned agricultural calcareous grassland under a regime of

  8. Potential of endozoochorous seed dispersal by sheep in calcareous grasslands: correlations with seed traits.

    NARCIS (Netherlands)

    Kuiters, A.T.; Huiskes, H.P.J.

    2010-01-01

    Questions: What is the potential of sheep to serve as seed dispersers via ingestion and defecation in calcareous grasslands? Is the presence of viable seeds from dung correlated with specific seed traits? Location: Calcareous grasslands, South Limburg, the Netherlands/Belgium. Methods: Dung samples

  9. Calcareous nannofossil events in the pre-evaporitic Messinian

    Science.gov (United States)

    Negri, Alessandra; Lozar, Francesca

    2017-04-01

    During the Messinian (7.2 to 5.3 Ma) the Mediterranean area experienced fast and deep climatic and eustatic structural changes. The stratigraphic framework for this interval is relatively well constrained and the beginning of the Messinian salinity crisis dated at 5.97 Ma determine a duration of at least 1.2 Ma for the pre-evaporitic Messinian that is object of this study. Several sites (Faneromeni, Pissouri, Polemi Fanantello borehole, Lemme, Pollenzo, Govone, Moncalvo; Wade and Bown, 2006; Kouwenhoven et al 2006, Morigi et al 2007, Lozar et al 2010, Dela Pierre et al 2011) show similar calcareous nannofossil record behavior, with several Sphenolithus spp. peaks recognised at different quotes in each of the sections. Aim of the present work is to compare the calcareous nannofossil data achieved in the above mentioned sections: interestingly, the occurrence of strongly oligotypic assemblages related to high salinity and unstable environments, appear to correlate precisely among the investigated sites and occur immediately before the onset of the Messinian salinity crisis, then offering the possibility to use them as bioevents for regional correlation. References Dela Pierre, F., Bernardi, E., Cavagna, S., Clari, P., Gennari, R., Irace, A., Lozar, F., Lugli, S., Manzi, V., Natalicchio, M., Roveri, M., Violanti, D., 2011. The record of the Messinian salinity crisis in the Tertiary Piedmont Basin (NW Italy): The Alba section revisited. Palaeogeography, Palaeoclimatology, Palaeoecology 310, 238-255. Kouwenhoven, T.J., Morigi, C., Negri, A., Giunta, S., Krijgsman, W., Rouchy, J.M., 2006 Paleoenvironmental evolution of the eastern Mediterranean during the Messinian: Constraints from integrated microfossil data of the Pissouri Basin (Cyprus). Marine Micropaleontology 60, 17-44. Lozar, F., Violanti, D., Dela Pierre, F., Bernardi, E., Cavagna, S., Clari, P., Irace, A., Martinetto, E., Trenkwalder, S., 2010. Calcareous nannofossils and foraminifers herald the Messinian

  10. The effect of elevated CO2 and N on decomposition of wheat straw and alfalfa residues in calcareous and non calcareous soils

    Directory of Open Access Journals (Sweden)

    S. Razavi Darbar

    2016-04-01

    Full Text Available Incorporation of plant residue in soils is considered as an important agricultural practice for maintaining soil fertility in sustainable agricultural system. CO2 levels, nitrogen fertilization and plant residues are factors which highly affect decomposition of added organic matter to soil. In this research controlled chambers were used to investigate the effects of elevated atmospheric CO2 concentrations (350 vs. 760 CO2 ppm under two N fertilization levels (0 vs. 500 kg N ha-1 and two replicates on decomposition of wheat and alfalfa residues in two calcareous (32.66 % CaCO3 and non calcareous soils (3.4 % CaCO3 at 6 times (0, 10, 20, 40, 60 and 90 under laboratory condition. Soil moistures were adjusted at 70% of field capacity. The results showed that elevated CO2 significantly increased decomposition of residues in both calcareous and non calcareous soils. In the samples that received N fertilizer, decomposition of wheat straw and alfalfa residues increased in both soils. From the obtained results, we concluded that in all treatments the amount of decomposition of wheat straw and alfalfa residues in calcareous soil were higher than non calcareous soils.

  11. Nuclear staining with alum hematoxylin.

    Science.gov (United States)

    Llewellyn, B D

    2009-08-01

    The hematoxylin and eosin stain is the most common method used in anatomic pathology, yet it is a method about which technologists ask numerous questions. Hematoxylin is a natural dye obtained from a tree originally found in Central America, and is easily converted into the dye hematein. This dye forms coordination compounds with mordant metals, such as aluminum, and the resulting lake attaches to cell nuclei. Regressive formulations contain a higher concentration of dye than progressive formulations and may also contain a lower concentration of mordant. The presence of an acid increases the life of the solution and in progressive solutions may also affect selectivity of staining. An appendix lists more than 60 hemalum formulations and the ratio of dye to mordant for each.

  12. Etika Berbusana Mahasiswa Stain Samarinda

    Directory of Open Access Journals (Sweden)

    Ida Suryani Wijaya

    2012-06-01

    Full Text Available Ethics is about behavior of human being, such as which one is right or wrong. The ethics is always affecting the human life. The ethics gives people orientation how he/she do manything every time every day. Islamic ethics consists of the way how someone interact each other; how someone should do or not to do, how to sit, how to walk, how to eat or drink, how to sleep, or how to get dressed. Al-Qur’an uses three terms to define about dressing, they are: libas, tsiyah, and sarahi. Dressing has a function as covering the body, as assessoris, as the way to do Islamic taqwa, and as an identiy. Dressing ethics of the female students of STAIN Samarinda has been regulated by the rector regulation No 19 of the year 2002 about relation and dressing ethics for the students of STAIN Samarinda.

  13. Experimental assessment of the liquefaction resistance of calcareous biogenous sands

    Directory of Open Access Journals (Sweden)

    Sandoval Eimar

    2012-10-01

    Full Text Available

    ABSTRACT

    Liquefaction is a phenomenon in which soils, typically sands, suddenly loose a substantial amount of their shear strength and stiffness, this often triggered by large-magnitude earthquakes. Most liquefaction research has focused on silicate-based sands and not on other sand types, such as calcareous biogenous sands Calcareous sands are usually composed of skeletal or non-skeletal remains of marine organisms, with unique characteristics in terms of their mineralogy surface roughness, particle shape, crushability, and intraparticle porosity. The unique characteristics of calcareous sands suggest that their geotechnical engineering behaviour can be substantially different compared to that of terrigenous sands, including their behaviour under seismic loading, which have not been very well studied

    This paper presents the results of an experimental programme aimed at studying the cyclic liquefaction resistance of uncemented calcareous biogenous sands retrieved from south-western Puerto Rico Evaluation of liquefaction potential involved a comprehensive set of isotropically consolidated undrained cyclic triaxial tests on reconstituted samples of this calcareous sand. The programme also included tests on Ottawa terrigenous silica sand samples prepared and tested in similar conditions for comparison purposes.

    In general, the experimental results showed that Cabo Rojo calcareous sands had higher liquefaction resistance compared to Ottawa silica sands tested under similar conditions. Important differences between calcareous and silica sands regarding pore pressure generation characteristics and axial strain accumulation were also observed


  14. Were Oceanic Plateaus Instrumental for Calcareous Nannoplankton Evolution?

    Science.gov (United States)

    Erba, E.; Casellato, C.; Bottini, C.

    2011-12-01

    The history of calcareous nannoplankton shows a general increase in species richness through the Mesozoic. Fertility and chemistry of the oceans, climate and pCO2 seem instrumental for nannoplankton abundance, diversification and adaptation, but high-resolution chronology of paleobiological and geological events is crucial for the understanding of evolutionary processes relative to ecosystem perturbations. Natural variations in atmospheric CO2 are essentially triggered by igneous activity and the role of ocean crust production in the evolution of seawater composition, nutrient cycling, climate change and, consequently, in calcareous nannoplankton biodiversity, might be more relevant than generally thought. Indeed, two major steps in nannofloral Mesozoic evolution correlate with construction of gigantic oceanic plateaus, namely the Shatsky Rise (SR) (Tithonian/Berriasian boundary interval) and the Ontong Java Plateau (OJP) (Barremian/Aptian boundary interval). During the latest Jurassic calcareous nannoplankton experienced a rapid diversification and rise in abundance of several taxa including heavily calcified nannoliths with consequent major increase in biogenic calcite production. The Tithonian origination of coccoliths and nannoliths suggests ideal paleoecological conditions for calcareous nannoplankton, presumably thriving in stable, relatively oligotrophic and cool oceans under low pCO2. Recent data indicate that this speciation and calcification episode was interrupted during magnetochron CM19r, prior to massive diversification of nannoconids. In the late Barremian-early Aptian interval, the nannoconid decline and crisis are paralleled by a major nannoplankton (mainly coccolith) speciation episode. Such calcification failure and coccolith diversification might reflect disruption of the thermocline, increased fertility and warming under excess CO2 levels. These evolutionary steps show rapid speciation, but differ because nannoliths became dominant in the late

  15. Production of Calcareous Nannofossil Ooze for Sedimentological Experiments

    DEFF Research Database (Denmark)

    Buls, Toms; Anderskouv, Kresten; Fabricius, Ida Lykke

    2015-01-01

    by an abundance of sedimentary structures, such as drifts, moats, sediment waves, and channels documented in the Upper Cretaceous Chalk Group of NW Europe. Despite chalk being a major hydrocarbon reservoir rock of the North Sea, surprisingly little is known about the physical behavior of the pelagic carbonate......The notion of fine-grained pelagic carbonates as uniform, monotonous sequences of sediments settled in a quiescent environment has been challenged over the past few decades. Fine-grained pelagic carbonates can undergo substantial reworking after their first deposition, as illustrated...... sediment from which the chalk formed-calcareous nannofossil ooze. This poses a serious challenge to the understanding of the depositional system and the properties of facies distribution. Experimental tests, such as those performed in laboratory flumes, are necessary to provide empirical data...

  16. Medial Calcar Support and Radiographic Outcomes of Plate Fixation for Proximal Humeral Fractures

    Directory of Open Access Journals (Sweden)

    Shih-Jie Lin

    2015-01-01

    Full Text Available Plate fixation remains one of the most popular surgical procedures for treating proximal humeral fractures (PHFx; however, substantial rates of complications have been reported in the literature. The objectives of the study were to examine how medial calcar support (MCS affects the radiographic outcomes and to determine the prognostic factors predicting treatment failure. We performed a retrospective cohort study of 89 adult patients who had PHFx and were treated with plate fixation at our institution in 2007–2011. The enrolled patients were separated into two groups according to disruption of medial calcar. Our results revealed an increased rate of poor radiographic outcomes in patients with disrupted medial calcar. Osteonecrosis of the humeral head and redisplacement were the two radiographic outcomes which had a positive causality with disruption of medial calcar (P=0.008 and 0.050, resp.. Deficient medial calcar, inadequate reduction, diabetes mellitus, chronic kidney disease, and chronic liver disease were all significant predictors for the development of osteonecrosis in patients after PHFx surgery. Inadequate reduction was also a predictor for redisplacement. We confirmed that the restoration of medial calcar as well as comorbid conditions plays key roles in treatment of patients having PHFx with disrupted medial calcar.

  17. Accelerated staining technique using kitchen microwave oven

    Directory of Open Access Journals (Sweden)

    Archana Mukunda

    2015-01-01

    Full Text Available Introduction: Histopathological diagnosis of specimens is greatly dependent on good sample preparation and staining. Both of these processes is governed by diffusion of fluids and dyes in and out of the tissue, which is the key to staining. Diffusion of fluids can be accelerated by the application of heat that reduces the time of staining from hours to the minute. We modified an inexpensive model of kitchen microwave oven for staining. This study is an attempt to compare the reliability of this modified technique against the tested technique of routine staining so as to establish the kitchen microwave oven as a valuable diagnostic tool. Materials and Methods: Sixty different tissue blocks were used to prepare 20 pairs of slides for 4 different stains namely hematoxylin and eosin, Van Gieson′s, 0.1% toluidine blue and periodic acid-Schiff. From each tissue block, two bits of tissues were mounted on two different slides. One slide was stained routinely, and the other stained inside a microwave. A pathologist evaluated the stained slides and the results so obtained were analyzed statistically. Results: Microwave staining considerably cut down the staining time from hours to seconds. Microwave staining showed no loss of cellular and nuclear details, uniform-staining characteristics and was of excellent quality. Interpretation and Conclusion: The cellular details, nuclear details and staining characteristics of microwave stained tissues were better than or equal to the routine stained tissue. The overall quality of microwave-stained sections was found to be better than the routine stained tissue in majority of cases.

  18. Sperm viability assessment in marine invertebrates by fluorescent staining and spectrofluorimetry: A promising tool for assessing marine pollution impact.

    Science.gov (United States)

    Gallo, Alessandra; Boni, Raffaele; Tosti, Elisabetta

    2018-01-01

    The viability of spermatozoa is a crucial parameter to evaluate their quality that is an important issue in ecotoxicological studies. Here, a new method has been developed to rapidly determine the viability of spermatozoa in three marine invertebrates: the ascidian Ciona intestinalis, the sea urchin Paracentrotus lividus and the mollusc Mytilus galloprovincialis. This method employed the dual DNA fluorescent staining coupled with spectrofluorimetric analysis. The dual fluorescent staining used the SYBR-14 stained live spermatozoa and propidium iodide stained degenerated cells that had lost membrane integrity. Stain uptake was assessed by confocal microscopy and then the percentage of live and dead spermatozoa was quantified by spectrofluorimetric analysis. The microscopic examination revealed three populations of spermatozoa: living-SYBR-14 stained, dead-PI stained, and dying-doubly stained spermatozoa. The fluorescence emission peak values recorded in a spectrofluorimeter provide the portion of live and dead spermatozoa showing a significant negative correlation. The stain combination was further validated using known ratios of live and dead spermatozoa. The present study demonstrated that the dual DNA staining with SYBR-14 and propidium iodide was effective in assessing viability of spermatozoa in marine invertebrates and that spectrofluorimetric analysis can be successfully employed to evaluate the percentage of live and dead spermatozoa. The method develop herein is simple, accurate, rapid, sensitive, and cost-effective, so it could be a useful tool by which marine pollutants may be screened for spermiotoxicity. Copyright © 2017 Elsevier Inc. All rights reserved.

  19. Late Palaeozoic calcareous algae in the Pisuerga basin (N-Palencia, Spain)

    NARCIS (Netherlands)

    Rácz, L.

    1965-01-01

    The calcareous algae were important rock-builders in the deposition of the many limestone members of the Pisuerga Basin. Systematic descriptions are given of 12 species. The following species are new: Clavaporella reinae, Clavaphysoporella endoi, Epimastopora camasobresensis, Psuedoepimastopora?

  20. Consolidation and strength properties of calcareous sediments from Kaneohe and Kailua Bays, Hawaii

    Digital Repository Service at National Institute of Oceanography (India)

    Brandes, H.G.; Khadge, N.H.; Nakayama, D.D.

    behavior of marine calcareous sediments of biogenic origin. Consolidation and drained triaxial tests indicate that mixed sediments have higher compressibilities and lower strengths compared to high-carbonate sediments. Differences in gradation among high...

  1. Biosuper as a phosphate fertilizer in a calcareous soil with low ...

    African Journals Online (AJOL)

    SERVER

    2007-06-04

    Jun 4, 2007 ... Key words: Zea mays, phosphorus uptake, phosphorus fertilization, corn, Thiobacillus, rock phosphate. ... improve plant nutrients availability in calcareous soils and .... lus elicits the reaction of sulphur with water and oxygen, ...

  2. Specialist plant species harbour higher reproductive performances in recently restored calcareous grasslands than in reference habitats

    OpenAIRE

    Harzé, Mélanie; Mahy, Grégory; Bizoux, Jean-Philippe; Piqueray, Julien; Monty, Arnaud

    2015-01-01

    Background and aims_Calcareous grasslands are local biodiversity hotspots in temperate regions that suffered intensive fragmentation. Ecological restoration projects took place all over Europe. Their success has traditionally been assessed using a plant community approach. However, population ecology can also be useful to assess restoration success and to understand underlying mechanisms. Methods_We took advantage of three calcareous grassland sites in Southern Belgium, where reference p...

  3. Biostratigraphic and morphometric analyses of specimens from the calcareous nannofossil genus Tribrachiatus

    Science.gov (United States)

    Self-Trail, Jean; Seefelt, Ellen L.; Shepherd, Claire L.; Martin, Victoria A.

    2017-01-01

    Biostratigraphic and morphometric analyses of calcareous nannofossil assemblages from one outcrop and two cored sections of lower Eocene sediments reveal the presence of two new species: Tribrachiatus lunatus sp. nov., and Tribrachiatus absidatus sp. nov. Differences between the new species and Tribrachiatus orthostylus are discussed. The first occurrence of the two new species is just below the calcareous nannofossil Zone NP11/NP12 boundary, close to the Chron 24r/23n boundary, and thus they are globally useful biostratigraphic markers.

  4. Calcar femorale grafting in the hemiarthroplasty of the hip for unstable inter trochanteric fractures.

    Science.gov (United States)

    Thakkar, Chandrashekar J; Thakkar, Savyasachi; Kathalgere, Rajshekhar T; Kumar, Malhar N

    2015-01-01

    The sliding screw-plate devices and cephalo-medullary nail devices have performed well in stable inter-trochanteric fractures in patients with reasonably good quality of bone. However, their suboptimal performance in comminuted fractures in the presence of osteoporotic bone has prompted many surgeons to consider bipolar hemiarthroplasty as the primary modality of management of comminuted inter-trochanteric fractures in elderly patients. However, long term stability of the hemiarthroplasty implant also may be compromised due to the presence of postero-medial bone loss at the area of the calcar. We have presented a simple and effective technique of calcar grafting by harvesting cortical bone strut from the neck of the fractured femur. A total of 34 patients with inter-trochanteric fractures of the femur were treated with calcar grafting. The mean age was 79.2 years. The graft was harvested from the calcar region of the head and neck fragment of the femur and wedged between the medial femoral cortex and medial edge of the prosthesis. The mean followup period was 54.5 months. In 32 of 34 (94%) patients in our series, the calcar graft healed well without dislodgement. There was graft resorption in two patients associated with subsidence of the implant and loosening. Calcar grafting using this technique provides stability to the implant in the presence of comminution and incorporates well in the majority of patients. Donor site morbidity of graft harvesting is also avoided.

  5. Influence of Cements Containing Calcareous Fly Ash as a Main Component Properties of Fresh Cement Mixtures

    Science.gov (United States)

    Gołaszewski, Jacek; Kostrzanowska-Siedlarz, Aleksandra; Ponikiewski, Tomasz; Miera, Patrycja

    2017-10-01

    The main goal of presented research was to examine usability of cements containing calcareous fly ash (W) from technological point of view. In the paper the results of tests concerning the influence of CEM II and CEM IV cements containing fly ash (W) on rheological properties, air content, setting times and plastic shrinkage of mortars are presented and discussed. Moreover, compatibility of plasticizers with cements containing fly ash (W) was also studied. Additionally, setting time and hydration heat of cements containing calcareous fly ash (W) were determined. In a broader aspect, the research contributes to promulgation of the possibility of using calcareous fly ash (W) in cement and concrete technology, what greatly benefits the environment protection (utilization of waste fly ash). Calcareous fly ash can be used successfully as the main component of cement. Cements produced by blending with processed fly ash or cements produced by interginding are characterized by acceptable technological properties. In respect to CEM I cements, cements containing calcareous fly ash worsen workability, decrease air content, delay setting time of mixtures. Cements with calcareous fly ash show good compatibility with plasticizers.

  6. Gram staining with an automatic machine.

    Science.gov (United States)

    Felek, S; Arslan, A

    1999-01-01

    This study was undertaken to develop a new Gram-staining machine controlled by a micro-controller and to investigate the quality of slides that were stained in the machine. The machine was designed and produced by the authors. It uses standard 220 V AC. Staining, washing, and drying periods are controlled by a timer built in the micro-controller. A software was made that contains a certain algorithm and time intervals for the staining mode. One-hundred and forty smears were prepared from Escherichia coli, Staphylococcus aureus, Neisseria sp., blood culture, trypticase soy broth, direct pus and sputum smears for comparison studies. Half of the slides in each group were stained with the machine, the other half by hand and then examined by four different microbiologists. Machine-stained slides had a higher clarity and less debris than the hand-stained slides (p stained slides, some Gram-positive organisms showed poor Gram-positive staining features (p Gram staining with the automatic machine increases the staining quality and helps to decrease the work load in a busy diagnostic laboratory.

  7. Influence of calcareous deposit on corrosion behavior of Q235 carbon steel with sulfate-reducing bacteria

    Science.gov (United States)

    Zhang, Jie; Li, Xiaolong; Wang, Jiangwei; Xu, Weichen; Duan, Jizhou; Chen, Shougang; Hou, Baorong

    2017-12-01

    Cathodic protection is a very effective method to protect metals, which can form calcareous deposits on metal surface. Research on the interrelationship between fouling organism and calcareous deposits is very important but very limited, especially sulfate-reducing bacteria (SRB). SRB is a kind of very important fouling organism that causes microbial corrosion of metals. A study of the influence of calcareous deposit on corrosion behavior of Q235 carbon steel in SRB-containing culture medium was carried out using electrochemical impedance spectroscopy (EIS), scanning electron microscopy (SEM) and surface spectroscopy (EDS). The calcareous deposit was formed with good crystallinity and smooth surface under the gradient current density of -30 μA cm-2 in natural seawater for 72 h. Our results can help elucidate the formation of calcareous deposits and reveal the interrelationship between SRB and calcareous deposits under cathodic protection. The results indicate that the corrosion tendency of carbon steel was obviously affected by Sulfate-reducing Bacteria (SRB) metabolic activity and the calcareous deposit formed on the surface of carbon steel under cathodic protection was favourable to reduce the corrosion rate. Calcareous deposits can promote bacterial adhesion before biofilm formation. The results revealed the interaction between biofouling and calcareous deposits, and the anti-corrosion ability was enhanced by a kind of inorganic and organic composite membranes formed by biofilm and calcareous deposits.

  8. Calcareous microfossil-based orbital cyclostratigraphy in the Arctic Ocean

    Science.gov (United States)

    Marzen, Rachel; DeNinno, Lauren H.; Cronin, Thomas M.

    2016-01-01

    Microfaunal and geochemical proxies from marine sediment records from central Arctic Ocean (CAO) submarine ridges suggest a close relationship over the last 550 thousand years (kyr) between orbital-scale climatic oscillations, sea-ice cover, marine biological productivity and other parameters. Multiple paleoclimate proxies record glacial to interglacial cycles. To understand the climate-cryosphere-productivity relationship, we examined the cyclostratigraphy of calcareous microfossils and constructed a composite Arctic Paleoclimate Index (API) "stack" from benthic foraminiferal and ostracode density from 14 sediment cores. Following the hypothesis that API is driven mainly by changes in sea-ice related productivity, the API stack shows the Arctic experienced a series of highly productive interglacials and interstadials every ∼20 kyr. These periods signify minimal ice shelf and sea-ice cover and maximum marine productivity. Rapid transitions in productivity are seen during shifts from interglacial to glacial climate states. Discrepancies between the Arctic API curves and various global climatic, sea-level and ice-volume curves suggest abrupt growth and decay of Arctic ice shelves related to climatic and sea level oscillations.

  9. Soil degradation effect on biological activity in Mediterranean calcareous soils

    Science.gov (United States)

    Roca-Pérez, L.; Alcover-Sáez, S.; Mormeneo, S.; Boluda, R.

    2009-04-01

    Soil degradation processes include erosion, organic matter decline, compaction, salinization, landslides, contamination, sealing and biodiversity decline. In the Mediterranean region the climatological and lithological conditions, together with relief on the landscape and anthropological activity are responsible for increasing desertification process. It is therefore considered to be extreme importance to be able to measure soil degradation quantitatively. We studied soil characteristics, microbiological and biochemical parameters in different calcareous soil sequences from Valencia Community (Easter Spain), in an attempt to assess the suitability of the parameters measured to reflect the state of soil degradation and the possibility of using the parameters to assess microbiological decline and soil quality. For this purpose, forest, scrubland and agricultural soil in three soil sequences were sampled in different areas. Several sensors of the soil biochemistry and microbiology related with total organic carbon, microbial biomass carbon, soil respiration, microorganism number and enzyme activities were determined. The results show that, except microorganism number, these parameters are good indicators of a soil biological activity and soil quality. The best enzymatic activities to use like indicators were phosphatases, esterases, amino-peptidases. Thus, the enzymes test can be used as indicators of soil degradation when this degradation is related with organic matter losses. There was a statistically significant difference in cumulative O2 uptake and extracellular enzymes among the soils with different degree of degradation. We would like to thank Spanish government-MICINN for funding and support (MICINN, project CGL2006-09776).

  10. Fractionation of applied 32P labeled TSP in calcareous soils

    International Nuclear Information System (INIS)

    Asfary, A.F.; Al-Merey, R.; Al-Hameish, M.

    2005-01-01

    Calcareous dark brown red soil (calcixerollic xerochrept) from northern Syria was used in a pot experiment to study the fate of triple super phosphate fertilizer (TSP) with and without a crop (Local durum wheat (Triticum turgidum L. group durum (Desf)) c v. Bohouth). The soil received 17μg P/g soil of 32 P labeled TSP, and samples were collected from soils and plants at successive dates. Soil inorganic P was ≅94% of total soil P, with only 50-80% being soluble. Calcium phosphate compounds were the dominant fraction (≤68%) of the soluble inorganic soil P followed by occluded iron phosphate (≤48%) and all other fractions were ≤9%. Isotopic measurements showed that ≅ 50% of fertilizer P was nonexchangeable within 2 days, and TSP values in each fraction of soil inorganic P fluctuated in relatively similar proportions to the concentrations of fractions in soil. Available P (soil and TSP) in cropped soil was more than that in the uncropped soil, and plants had no effect on the distribution of P from fertilizer amongst the different P fractions. (author)

  11. Sodium hypochlorite oxidation of petroleum aliphatic contaminants in calcareous soils.

    Science.gov (United States)

    Picard, François; Chaouki, Jamal

    2016-02-01

    This research project investigated the sodium hypochlorite (NaClO) oxidation of aliphatic petroleum contaminants (C10-C50) in a calcareous soil (average 5473 ppm C10-C50, 15 wt% Ca), which had been excavated from a contaminated industrial site. The decontamination objective was to lower the C10-C50 concentration to 700 ppm. CO2 acidity was used in the project to boost the NaClO oxidation yield and seems to have played a role in desorbing the natural organic matter. The experimental conditions were a 2- to 16-h reaction time, at room temperature, with a 1 to 12.5 wt% NaClO oxidative solution and a fixed 2:1 solution-to-soil ratio. With a 3 wt% NaClO solution and with a CO2 overhead, the NaClO dosage requirement was maintained below 60 g NaClO/g of oxidized C10-C50 over the entire decontamination range. The strong chlorine smell remaining after the reaction was completed suggests that part of the NaClO requirement can be recycled. Except traces of chloroform, there were no regulation-listed organochloride contaminants detected on either the treated soil samples or leachates and the total count of chlorinated compounds in treated soil samples was below the detection limit of 250 mg/kg. The NaClO oxidation mechanism on aliphatic substrates might be triggered by transition metals, such as manganese, but no attempt has been made to investigate the oxidation mechanism. Further investigations would include a constant-fed NaClO system and other techniques to lower the required NaClO dosage. Copyright © 2015 Elsevier Ltd. All rights reserved.

  12. Firing transformations of an argentinean calcareous commercial clay

    Directory of Open Access Journals (Sweden)

    M. F. Serra

    2013-06-01

    Full Text Available Mineralogical transformations caused by firing are usually studied by XRD methods only semi-quantitatively. In this work the original mineral disappearance and the neo-mineralization were evaluated quantitatively. Furthermore an indirect non crystalline phase quantification was performed under 1100 ºC was also carried out using the quartz content as internal standard. This study specifically discusses the behavior of an Argentinean white calcareous earthenware commercial when subjected to traditional ceramic firing, besides the technological importance of this particular material, it acts as a model for other clay based ceramic materials. Materials were subjected to thermal treatments between 700 ºC and 1100 ºC. A preliminary sintering characterization was carried out by contraction and porosity evolution. Simultaneous thermogravimetric and differential thermal analysis (TG-DTA was carried out to elucidate the actual temperature at which the chemical changes occur. Finally, a quantitative analysis based on the Rietveld refinement of the X-ray diffraction patterns was performed to characterize the crystalline phases present in both the clay and in the materials obtained after different thermal treatments. The actual chemical reactions are proposed. The phases identified after firing at traditional working temperature (1040 ºC are quartz, plagioclase, and the Spinel type alumino-silicate, accompanied by the non-diffracting un-reacted metakaolin and some amount of amorphous glassy phase. At intermediate temperatures (900 ºC the presence of gehlenite was also detected. The carbonates (calcite and dolomite presence and decomposition were also evaluated and demonstrated to determine the sintering characteristics of this material.

  13. Identification of Nutrient Deficiencies at Calcareous Soils for Maize

    Directory of Open Access Journals (Sweden)

    Dedi Nursyamsi

    2010-09-01

    Full Text Available A pot experiment was conducted to identify nutrient deficiencies at calcareous soils for maize (Zea mays, L. in green house of Indonesian Soil Research Institute using top soil (0-20 cm samples taken from Bogor (Typic Hapludalfs and Blora (Typic Haplustalfs. The experiment used Randomized Completely Block Design, minus one test with 12 treatments and three replications, as well as maize of P21 variety as plant indicator. The results showed that use of N, P, K, Zn, Cu, Fe, and Mn fertilizers increased soil macro nutrients, i.e.: soil total-N, Olsen-P, HCl-P, and HCl-K, as well as soil micro nutrients, i.e.: soil DTPA-Zn, Cu, Fe, and Mn at both tested soils. Use of maize straw compost increased soil organic-C, total-N, HCl-K, and exchangeable Ca at Typic Hapludalfs and increased only soil organic-C and total-N at Typic Haplustalfs. Use of animal manure compost increased soil organic-C, exchangeable Ca and Mg, and CEC. Use of N, P, K, S, Zn, Cu, Fe, and Mn fertilizers increased each plant nutrients uptake at the soils. Use of both organic matters increased plant N, P, K, and Fe uptake at Typic Hapludalfs as well as increased only plant N, P, and K uptake at Typic Haplustalfs. Identification result showed that maize growth suffered from N, P, and K deficiencies at Typic Hapludalfs as well as N and P deficiencies at Typic Haplustalfs. Beside the nutrients, soil organic matter was also found out as limiting factor for maize growth in the soils.

  14. A neogene seawater sulfur isotope age curve from calcareous pelagic microfossils

    International Nuclear Information System (INIS)

    Burdett, J.W.; Arthur, M.A.; Richardson, M.

    1989-01-01

    Until now, our knowledge of the sulfur isotopic composition of seawater through geologic time has depended on stable isotopic analysis of sulfate from evaporites. Owing to the sporadic occurrence of evaporites through time, the secular sulfur isotope age curve contains many gaps with little or no data. In order to fill in some of these gaps, particularly the Neogene, we have analyzed the sulfur isotopic composition of carbonate-associated sulfate in carbonate tests of planktonic foraminifera. Other investigators have shown that sulfate may occur in biogenic calcites either lattice-bound, as micro-fluid inclusions, in adsorbed phases, or as protein polysaccharides. Whatever the origin, the sulfur isotopic composition of this sulfate appears to be representative of that of the water in which the organism lived, as shown by results on recent calcareous foraminifera and macrofossils. Using this approach for study of Miocene to Recent pelagic marine sediments supplemented by new data for Miocene marine evaporites from the Gulf of Suez, we have found that the δ 34 S of seawater has decreased about 2.5per mille over the past 25 m.y. and that most of the decrease has occurred over the past 5 m.y., paralleling a decrease in the δ 13 C of dissolved oceanic bicarbonate from the same interval. Sedimentary redox models based on isotope records suggest that organic carbon and sulfide burial have both decreased over the past 5 m.y. Alternatively, an increase in weathering rates over the past 5 m.y. would not require a decrease in organic carbon or sulfide burial as long as the isotopic effect of the increased river input exceeds the isotopic effect of the burial of the reduced species. In either case, the net result would be a decrease in atmospheric p O2 . (orig.)

  15. Laser treatment of Port-wine stains

    OpenAIRE

    Boffa, Michael J.

    2001-01-01

    A state-of-the-art pulsed dye laser machine to treat port-wine stains and other vascular lesions has been available in the Malta Health Service since 1999. This article reviews the pathophysiology and clinical features of port- wine stains and describes the principles of laser treatment for this condition.

  16. Dynamic shear stiffness and damping ratio of marine calcareous and siliceous sands

    Science.gov (United States)

    Javdanian, Hamed; Jafarian, Yaser

    2018-03-01

    Shear stiffness and damping ratio of two marine calcareous and siliceous sands were evaluated through an experimental program. Resonant column and cyclic triaxial experiments were conducted to measure the dynamic properties of the sands in small and large shear strain amplitudes. The tests were conducted under various initial stress-density conditions. The influence of effective confining pressure on the dynamic properties of the sands was assessed and compared in a preceding paper. It was shown that the calcareous sand has higher shear stiffness and lower damping ratio in comparison to the siliceous sand. In this note, the results are presented in more details and the dynamic behavior curves of the studied sands are compared with some available models, mostly developed based on the laboratory data of siliceous sands. This comparative study reveals that the previous models predict the dynamic properties of the calcareous sand in less precision than those of the siliceous sand.

  17. Effluent and gamma-irradiated digested sludge additions on calcareous soils

    International Nuclear Information System (INIS)

    Lee-Rodriguez, V.

    1978-01-01

    The long-term use of sewage effluent and the use of gamma-irradiated treated digested sewage sludge (RDSS) were studied under field and greenhouse conditions, respectively. The purpose of this investigation was to: (1) study the effect of long and short-term application of secondary sewage effluent and RDSS, respectively, on the buildup of iron and phytotoxicity problems on calcareous soils; (2) study the potential phytotoxicity of RDSS and observe the micronutrient fertilizer value of RDSS through three successive plantings on calcareous soil; (3) evaluate RDSS as a source of iron in a soil known to be severely iron-deficient

  18. Biostratigraphy of the Lower Cretaceous Schrambach Formation on the classical locality of Schrambachgraben (Northern Calcareous Alps, Salzburg Area)

    Czech Academy of Sciences Publication Activity Database

    Boorová, D.; Skupien, P.; Vašíček, Zdeněk

    2014-01-01

    Roč. 90, č. 1 (2014), s. 89-131 ISSN 1214-1119 Institutional support: RVO:68145535 Keywords : biostratigraphy * Schrambach and Rossfeld formations * Berriasian, Valanginian * calcareous and non-calcareous dinoflagellata * ammonites Subject RIV: DB - Geology ; Mineralogy Impact factor: 1.515, year: 2014 http://www.geology.cz/bulletin/fulltext/1479_Boorova_in_press.pdf

  19. Multicenter Assessment of Gram Stain Error Rates.

    Science.gov (United States)

    Samuel, Linoj P; Balada-Llasat, Joan-Miquel; Harrington, Amanda; Cavagnolo, Robert

    2016-06-01

    Gram stains remain the cornerstone of diagnostic testing in the microbiology laboratory for the guidance of empirical treatment prior to availability of culture results. Incorrectly interpreted Gram stains may adversely impact patient care, and yet there are no comprehensive studies that have evaluated the reliability of the technique and there are no established standards for performance. In this study, clinical microbiology laboratories at four major tertiary medical care centers evaluated Gram stain error rates across all nonblood specimen types by using standardized criteria. The study focused on several factors that primarily contribute to errors in the process, including poor specimen quality, smear preparation, and interpretation of the smears. The number of specimens during the evaluation period ranged from 976 to 1,864 specimens per site, and there were a total of 6,115 specimens. Gram stain results were discrepant from culture for 5% of all specimens. Fifty-eight percent of discrepant results were specimens with no organisms reported on Gram stain but significant growth on culture, while 42% of discrepant results had reported organisms on Gram stain that were not recovered in culture. Upon review of available slides, 24% (63/263) of discrepant results were due to reader error, which varied significantly based on site (9% to 45%). The Gram stain error rate also varied between sites, ranging from 0.4% to 2.7%. The data demonstrate a significant variability between laboratories in Gram stain performance and affirm the need for ongoing quality assessment by laboratories. Standardized monitoring of Gram stains is an essential quality control tool for laboratories and is necessary for the establishment of a quality benchmark across laboratories. Copyright © 2016, American Society for Microbiology. All Rights Reserved.

  20. Surface staining of small intestinal biopsies

    DEFF Research Database (Denmark)

    Poulsen, Steen Seier

    1977-01-01

    Small intestinal biopsies are most often by routine examined under a stereo-microscope, prior to embedding for histological examination. This is done in order to get a view of the appearance of the mucosal pattern, especially villus configuration. The distinctness of the surface pattern however......, is improved considerably if the biopsies are stained with Alcian Green and/or PAS before they are examined. In the present paper a detailed description is given of staining of small intestinal biopsies as whole mounts. The difference between the unstained and the stained biopsies is illustrated by a few...

  1. Comparison of special stains for keratin with routine hematoxylin and eosin stain.

    Science.gov (United States)

    Rao, Roopa S; Patil, Shankargouda; Majumdar, Barnali; Oswal, Rakesh G

    2015-03-01

    Keratins are the most abundant proteins and are characteristic findings in many epithelial pathologies, making it a diagnostically important marker, both histopathologically and immunohistochemically. Since, immunohistochemistry is an expensive diagnostic tool, special stains to detect the degree of keratinization could serve as a faster and economic option. The aim of the present study was to compare the efficacy of special stains for keratin with standard hematoxylin and eosin stain (H and E). Objectives include: (i) To subject the diagnosed cases of keratin disorders to the selected special stains: Ayoub-shklar method, Dane-Herman method, Alcian blue -periodic acid Schiff 's (PAS), rapid papanicolaou (PAP) and Gram's stain. (ii) To compare the staining specificity and staining intensity of special stains with respect to routine hematoxylin and eosin (H and E) stain. (iii) To compare the efficacy of special stains to routine H and E stain in identification of the type of keratin present in the selected cases. A total of 80 cases of known pathology for keratin were retrieved from the department archive, which included 10 each of normal gingiva, hyperkeratosis, squamous papilloma, verrucous hyperplasia, verrucous carcinoma, well-differentiated squamous cell carcinoma, orthokeratinized odontogenic cyst and keratocystic odontogenic tumors. Six sections of 4 µ each from the paraffin blocks were made, stained with H and E and the special stains and these were evaluated by 2 pathologists based on the modified scoring criteria from Rahma Al-Maaini and Philip Bryant 2008. The results were tabulated using Chi square and kappa statistics. The statistical values for identification of the type of keratinization was insignificant showing that ortho and parakeratinized epithelia could be correctly identified by both H and E as well as all the special stains. Furthermore, all the special stains showed a positive result and statistical significance (P < 0.001) with respect to

  2. Gram staining apparatus for space station applications

    Science.gov (United States)

    Molina, T. C.; Brown, H. D.; Irbe, R. M.; Pierson, D. L.

    1990-01-01

    A self-contained, portable Gram staining apparatus (GSA) has been developed for use in the microgravity environment on board the Space Station Freedom. Accuracy and reproducibility of this apparatus compared with the conventional Gram staining method were evaluated by using gram-negative and gram-positive controls and different species of bacteria grown in pure cultures. A subsequent study was designed to assess the performance of the GSA with actual specimens. A set of 60 human and environmental specimens was evaluated with the GSA and the conventional Gram staining procedure. Data obtained from these studies indicated that the GSA will provide the Gram staining capability needed for the microgravity environment of space.

  3. Research on pre-staining gel electrophoresis

    International Nuclear Information System (INIS)

    Zhong Ruibo; Liu Yushuang; Zhang Ping; Liu Jingran; Zhao Guofen; Zhang Feng

    2014-01-01

    Background: Gel electrophoresis is a powerful biochemical separation technique. Most biological molecules are completely transparent in the visible region of light, so it is necessary to use staining to show the results after gel electrophoresis, and the general steps of conventional staining methods are time-consuming. Purpose: We try to develop a novel approach to simplify the gel electrophoresis: Pre-Staining Gel Electrophoresis (PSGE), which can make the gel electrophoresis results monitored in real time. Methods: Pre-stain the protein samples with Coomassie Brilliant Blue (CBB) for 30 min before loading the sample into the gel well. Results and Conclusion: PSGE can be successfully used to analyze the binding efficiency of Bovine Serum Albumin (BSA) and amphiphilic polymer via chemical coupling and physical absorption, and the double PSGE also shows a great potential in bio-analytical chemistry. (authors)

  4. New Grocott Stain without Using Chromic Acid

    International Nuclear Information System (INIS)

    Shiogama, Kazuya; Kitazawa, Kayo; Mizutani, Yasuyoshi; Onouchi, Takanori; Inada, Ken-ichi; Tsutsumi, Yutaka

    2015-01-01

    We established a new “ecological” Grocott stain for demonstrating fungi, based upon a 4R principle of refusal, reduction, reuse, and recycle of waste management. Conventional Grocott stain employs environmentally harsh 5% chromic acid for oxidization. Initially, we succeeded in reducing the concentration of chromic acid from 5% to 1% by incubating the solution at 60°C and using five-fold diluted chromic acid solution at which point it was reusable. Eventually, we reached the refusal level where 1% periodic acid oxidization was efficient enough, when combined with preheating of sections in the electric jar, microwave oven, or pressure pan. For convenience sake, we recommend pressure pan heating in tap water for 10 min. Stainability of fungi in candidiasis and aspergillosis was comparable with conventional Grocott stain, while Mucor hyphae showed enhanced staining. The modified sequence was further applicable to detecting a variety of mycotic pathogens in paraffin sections. Our environmentally-friendly Grocott stain also has the advantage of avoiding risk of human exposure to hexavalent chromium solution in the histopathology laboratory. The simple stain sequence is can be easily applied worldwide

  5. Is succession in wet calcareous dune slacks affected by free sulfide?

    NARCIS (Netherlands)

    Adema, EB; van Gemerden, H; Grootjans, AP; Adema, Erwin B.; Grootjans, Ab P.; Rapson, G.

    Consequences of sulfide toxicity on succession in wet calcareous dune slacks were investigated. Sulfide may exert an inhibitory effect on dune slack plants, but several pioneer species exhibit ROL (Radial Oxygen Loss) and thereby protect themselves against free sulfide. Under oxic conditions free

  6. Sunlight-enhanced calcareous deposition on cathodic stainless steel in natural seawater

    Digital Repository Service at National Institute of Oceanography (India)

    Eashwar, M.; SathishKumar, P.; Ravishankar, R.; Subramanian, G.

    In replicate series of experiments in natural seawater, one in full darkness and the other in a 1:1 diurnal cycle with as little as 5 percent of natural solar illumination, sunlight promoted calcareous deposition on cathodic stainless steel surfaces...

  7. The potential of willow for remediation of heavy metal polluted calcareous urban soils

    DEFF Research Database (Denmark)

    Jensen, J K; Holm, P E; Nejrup, J

    2009-01-01

    Growth performance and heavy metal uptake by willow (Salix viminalis) from strongly and moderately polluted calcareous soils were investigated in field and growth chamber trials to assess the suitability of willow for phytoremediation. Field uptakes were 2-10 times higher than growth chamber...

  8. Geochemistry of calcareous sediments from the SW Carlsberg Ridge: Evidence for deeper carbonate compensation depth

    Digital Repository Service at National Institute of Oceanography (India)

    Valsangkar, A.B.; Ambre, N.V.

    Concentration of Mn, Fe, Ni, Co, Zn, Ca, Mg, K, Al, Si, Ti, P and CaCO sub(3) show wide range for the calcareous sediments from SW Carlsberg Ridge (CR). Compared with the average pelagic clays, the CR sediments are enriched by Mg, Ni, Co, and Zn...

  9. Community structure and palaeoecological implications of calcareous encrusters on artificial substrates across a Mexican Caribbean reef

    Science.gov (United States)

    Hepburn, L. J.; Blanchon, P.; Murphy, G.; Cousins, L.; Perry, C. T.

    2015-03-01

    Calcareous encrusters stabilize and bind reef framework and contribute significantly to reef function and biodiversity. Their calcareous skeletons have good preservation potential which, together with well-constrained habitat preferences, makes them useful indicators of past environmental conditions. However, our knowledge of environmental tolerances and spatial distribution trends of encrusters remains limited. Here, we determine the distributional trends and environmental tolerances of calcareous encrusters and delineate the relevance of particular species/genera for palaeoecological reconstructions. Artificial microhabitats were created to mimic exposed, partially cryptic, and cryptic habitats in various orientations for periods of 1 and 2 yr. Calcareous encruster coverage was high, especially in cryptic habitats (95 %), and clear successional trends were observed over time. Total encruster carbonate production was intermediate (range 72.8-476.3 g m-2 yr-1). Encruster species and growth morphology exhibited a defined zonation in response to reef sub-environment, microhabitat, and environmental factors such as light and wave exposure. Linear regression identified three coralline algae genera, as well as Homotrema rubrum, Planorbulina spp., and cemented bivalves as those most likely to occur in particular habitats. Therefore, the presence of these species may be used with greater confidence in distinguishing palaeomicroenvironments.

  10. Coniacian-maastrichtian calcareous nannofossil biostratigraphy and carbon-isotope stratigraphy in the Zagros Basin (Iran)

    DEFF Research Database (Denmark)

    Razmjooei, Mohammad Javad; Thibault, Nicolas; Kani, Anoshiravan

    2014-01-01

    , White Fall, Kingsdown, Michel Dean, Haven Brow, Horseshoe Bay, Buckle, Hawks Brow, Santonian/Campanian boundary (SCBE) and Campanian/Maastrichtian boundary (CMBE) events. Correlation to a recently proposed global δ13C stack for the Late Cretaceous points to a major mismatch of this compilation...... and calcareous nannofossil bio-horizons, and (2) their correlation between the Tethyan and Boreal realms....

  11. Calcareous nannofossils from the Boreal upper Campanian-Maastrichtian Chalk of Denmark

    DEFF Research Database (Denmark)

    Thibault, Nicolas Rudolph

    2010-01-01

    Boreal calcareous nannofossil assemblages have been documented from three sections in Denmark. from the Upper Campanian to Upper Maastrichtian (nannofossil zones UC16a(BP) to UC20d(BP)): the Stevns-1 borehole, next to the Cretaceous/Palaeogene boundary section of Stevns Klint, eastern Sjaelland...

  12. Laboratory Experiment Investigating the Impact of Ocean Acidification on Calcareous Organisms

    Science.gov (United States)

    Perera, Alokya P.; Bopegedera, A. M. R. P.

    2014-01-01

    The increase in ocean acidity since preindustrial times may have deleterious consequences for marine organisms, particularly those with calcareous structures. We present a laboratory experiment to investigate this impact with general, introductory, environmental, and nonmajors chemistry students. For simplicity and homogeneity, calcite was…

  13. Endolithic fungi from deep sea calcareous substrata: isolation and laboratory studies

    Digital Repository Service at National Institute of Oceanography (India)

    Raghukumar, C.; Raghukumar, S.; Sharma, S.; Chandramohan, D.

    substrata at 100 atm. in 25 days. This fungus was not capable of acid production on nutrient media in the presence of various carbon sources, nor did it produce proteases. The role of fungi in calcareous substrata in the sea is discussed with reference...

  14. The Luna stain, an improved selective stain for detection of microsporidian spores in histologic sections

    Science.gov (United States)

    Peterson, Tracy S.; Spitsbergen, Jan M.; Feist, Stephen W.; Kent, Michael L.

    2014-01-01

    Microsporidia in histologic sections are most often diagnosed by observing spores in host tissues. Spores are easy to identify if they occur in large aggregates or xenomas when sections are stained with hematoxylin and eosin (H&E). However, individual spores are not frequently detected in host tissues with conventional H&E staining, particularly if spores are scattered within the tissues, areas of inflammation or small spores in nuclei (i.e., Nucleospora salmonis). Hence, a variety of selective stains that enhance visualization of spores are recommended. We discovered that the Luna stain, used to highlight eosinophils, red blood cells and chitin in arthropods and other invertebrates, also stains spores of Pseudoloma neurophilia. We compared this stain to the Gram, Fite’s acid fast, Giemsa, and H&E stains on eight aquatic microsporidian organisms that were readily available in our two laboratories: Loma salmonae, Glugea anomala, Pseudoloma neurophilia, Pleistophora hyphessobryconis, Pleistophora vermiformis, Glugea sp., Steinhausia mytilovum and an unidentified microsporidian from E. sinensis, UK. Based on tinctorial properties and background staining, the Luna stain performed better for detection of 6 of the 8 microsporidia. Gram stain was superior for the two microsporidia from invertebrates, Steinhausia mytilovum and the unidentified microsporidian from E. sinensis. PMID:21848126

  15. Use of calcareous algae and monensin in Nellore cattle subjected to an abrupt change in diet

    Directory of Open Access Journals (Sweden)

    Roberta Ferreira Carvalho

    2016-04-01

    Full Text Available ABSTRACT: Additives are used in high concentrate diets to prevent metabolic disorders in cattle. This study was designed to evaluate the effect of calcium sources and monensin on the control of ruminal acidosis in Nellore cattle that were abruptly shifted to a high (92.3% concentrate diet. Eight cannulated steers were randomly assigned to two contemporary 4x4 Latin square. Treatments involved the addition of a calcium source, either limestone (LI or a product derived from calcareous algae (CA, to the basic diet with or without the presence of monensin. Calcareous alga (Lithothamnium calcareum is a natural and renewable product and a source of calcium carbonate. The quantity of added limestone, calcareous algae and monensin was 7.1g kg-1, 7.4g kg-1 and 30mg kg-1 DM, respectively. There was no effect of calcium source (P=0.607 or monensin (P=0.294 on feed intake or on the concentration of short chain fatty acids. Treatments with calcareous algae resulted in a higher mean ruminal pH (P=0.039, a shorter amount of time with the ruminal pH under 5.2 (P<0.001 and a better control of blood pH (P=0.006. Treatments with monensin also resulted in a shorter amount of time with the ruminal pH below 5.2 (P=0.023. Calcareous algae were shown to be effective in controlling adverse changes in the rumen and in blood variables for Nellore cattle that were subjected to an abrupt change to a high concentrate diet.

  16. Selection and application of exterior stains for wood

    Science.gov (United States)

    R. Sam. Williams; William C. Feist

    1999-01-01

    Exterior stains for wood protect the wood surface from sunlight and moisture. Because stains are formulated to penetrate the wood surface, they are not prone to crack or peel as can film-forming finishes, such as paints. This publication describes the properties of stains and wood, methods for applying stains, and the expected service life of stains.

  17. Comparism of Various Staining Techniques in the Diagnosis of ...

    African Journals Online (AJOL)

    SITWALA COMPUTERS

    external intermediate host, usually an animal, in which sporogenesis and oocyst ... the parasite was detected in 111 of the samples stained,. 100(90.0%) of which .... screen stained slide was the auramine fluorochrome stain. The widely used ...

  18. Pleural and Pulmonary Staining at Inferior Phrenic Arteriography Mimicking a Tumor Staining of Hepatocellular Carcinoma

    International Nuclear Information System (INIS)

    Lee, Deok Hee; Hwang, Jae Cheol; Lim, Soo Mee; Yoon, Hyun-Ki; Sung, Kyu-Bo; Song, Ho-Young

    2000-01-01

    Purpose: To describe the findings of pleural and pulmonary staining of the inferior phrenic artery, which can be confused with tumor staining during transarterial chemoembolization (TACE) of hepatoma.Methods: Fifteen patients who showed pleural and pulmonary staining without relationship to hepatic masses at inferior phrenic arteriography were enrolled. The staining was noted at initial TACE (n = 8), at successive TACE (n = 5), and after hepatic surgery (n = 2). The angiographic pattern, the presence of pleural change on computed tomography (CT), and clinical history were evaluated.Results: Draining pulmonary veins were seen in all cases. The lower margin of the staining corresponded to the lower margin of the pleura in 10 patients. CT showed pleural and/or pulmonary abnormalities in all cases. After embolization of the inferior phrenic artery, the accumulation of iodized oil in the lung was noted.Conclusion: Understanding the CT and angiographic findings of pleural and pulmonary staining during TACE may help differentiate benign staining from tumor staining

  19. Short Nissl staining for incubated cryostat sections of the brain.

    Science.gov (United States)

    Lindroos, O F

    1991-01-01

    Nissl stain often binds poorly to cryostat sections which have been incubated in solutions of radiolabeled ligands. Such incubation is used in receptor autoradiography of the brain when using the in vitro method. We have developed a rapid (16 min) modification of Nissl staining for sections that bind stain poorly, e.g., incubated sections. The method stains well sections which cannot be stained with other rapid Nissl staining methods.

  20. A comparative assessment of commonly employed staining ...

    African Journals Online (AJOL)

    Following an increase in the number of reports of Cryptosporidium infections and the problems encountered in detecting these organisms in faecal smears, a comparative assessment of a modification of the Sheather's flotation technique and other commonly employed staining procedures proved the modified Sheather's ...

  1. Photoacoustic imaging of port-wine stains

    NARCIS (Netherlands)

    Kolkman, Roy G. M.; Mulder, Miranda J.; Glade, Conrad P.; Steenbergen, Wiendelt; van Leeuwen, Ton G.

    2008-01-01

    BACKGROUND AND OBJECTIVE: To optimize laser therapy of port-wine stains (PWSs), information about the vasculature as well as lesion depth is valuable. In this study we investigated the use of photoacoustic imaging (PAI) to obtain this information. STUDY DESIGN/MATERIALS AND METHODS: PAI uses pulsed

  2. Photoacoustic Imaging of Port-Wine Stains

    NARCIS (Netherlands)

    Kolkman, R.G.M.; Mulder, M.J.; Mulder, Miranda J.; Glade, Conrad P.; Steenbergen, Wiendelt; van Leeuwen, Ton

    2008-01-01

    Background and Objective: To optimize laser therapy of port-wine stains (PWSs), information about the vasculature as well as lesion depth is valuable. In this study we investigated the use of photoacoustic imaging (PAI) to obtain this information. - Study Design/Materials and Methods: PAI uses

  3. Foraminiferans as food for Cephalaspideans (Gastropoda: Opisthobranchia), with notes on secondary tests around calcareous foraminiferans

    DEFF Research Database (Denmark)

    Cedhagen, Tomas

    1996-01-01

    species, Ammonia batavus and two agglutinating species, Ammoscalaria pseudospiralis and Ammotium cassis. The test (shell) material of the latter two species was sand grains (quartz). It was inferred that the gastropods avoid agglutinating foraminiferans as food. Many calcareous but not agglutinating......The food of four species of Cephalaspidea (Philine aperta, Philine denticulata, Philine scabra and Cylichna cylindracea) was studied in animals collected on silty clay bottoms at 20-35 m depth on the west coast of Sweden. The specimens were dissected. Only calcareous foraminiferans were found...... foraminiferans surround themselves with a “secondary test”, a cyst or covering of foreign particles around the test. This structure has earlier been called a “reproductive cyst” or “feeding cyst” in some species. “Secondary tests” are primarily connected with feeding, but might also be a preadaptation for other...

  4. Medial calcar of proximal humeral fracture as landmark in restoration of humeral length in case of hemiarthroplasty

    Czech Academy of Sciences Publication Activity Database

    Hromádka, R.; Kuběna, Aleš Antonín; Šmíd, Martin; Popelka, S.

    2014-01-01

    Roč. 35, č. 5 (2014), s. 473-479 ISSN 0930-1038 Institutional support: RVO:67985556 Keywords : Fracture of proximal humerus * Calcar of humeral fracture * Reconstruction of proximal humerus * Reconstruction of humeral length * Shoulder arthroplasty * Shoulder hemiarthroplasty Subject RIV: FJ - Surgery incl. Transplants Impact factor: 1.047, year: 2014 http://library.utia.cas.cz/separaty/2013/E/smid-medial calcar of proximal humeral fracture as landmark in restoration of humeral length in case of hemiarthroplasty.pdf

  5. Efficacy of evaluation of rooster sperm morphology using different staining methods.

    Science.gov (United States)

    Lukaszewicz, E; Jerysz, A; Partyka, A; Siudzińska, A

    2008-12-01

    This work focused on inexpensive methods of evaluation fowl sperm morphology, based on eosin-nigrosin smears, which can determine disorders in spermatogenesis and can be recommended for evaluating the fertilising potency and selecting males in flocks reproduced by artificial insemination. Four fowl breeds (Black Minorca, Italian Partridge, Forwerk and Greenleg Partridge) were used to determine the efficacy of sperm morphology evaluation using four eosin-nigrosin staining methods (according to Blom, Bakst and Cecil, Morisson, Jaśkowski) and three examiners of different experience (high, medium, novice). There were significant (P< or = 0.01) differences in sperm morphology between Blom's staining method and those of Bakst and Cecil, Morisson or Jaśkowski, irrespective of fowl breed and examiners experience. Blom stain caused sperm head swelling and showed a drastic reduction in the proportion of live spermatozoa with normal morphology. The staining method had a greater influence on sperm morphology evaluation than the experience of the examiners.

  6. Dried gamma-irradiated sewage solids use on calcareous soils: crop yields and heavy metals uptake

    International Nuclear Information System (INIS)

    McCaslin, B.D.; Sivinski, J.S.

    1980-01-01

    The fertilizer values of gamma-irradiated digested sewage solids (RDSS) and gamma-irradiated undigested sewage solids (RUSS) have been examined on calcareous soils. Previously published data from Sandia Laboratories have shown that approximately 1 mega-rad of gamma-irradiation effectively destroys pathogenic bacteria, parasites and plant seeds in dried sewage solids. Greenhouse experiments directly comparing gamma-irradiated and non-irradiated undigested and digested dried sewage solids as fertilizers indicate little or no effect of 1 mega-rad gamma radiation treatment on plant yield or plant-nutrient uptake and demonstrated considerable benefit from using sewage solids on calcareous soils. Plant response to undigested sewage solids was considerably greater than to digested sewage solids when applied at levels that were isonitrogenous. The calcareous soils in New Mexico typically range in pH from 7.5 to 9.0, limiting the plant-availability of many elements, especially heavy metals. Soils irrigated with sewage-effluent for 40 years demonstrated beneficial use of supplied plant-nutrients with no apparent increase in plant-uptake of heavy metals. RDSS applied to a calcareous soil low in plant-available iron increased plant growth in the greenhouse considerably more than treatments with equal amounts of nitrogen, phosphorus and iron applied as common fertilizer materials. Plant tissue concentrations of Fe, Zn, Mn and Cu showed that RDSS was a good source of these nutrients. Results also indicated that the total soluble salt concentration of the RDSS was the factor most limiting plant growth. Chromium, Cd, Ni and Pd plant-tissue concentrations were apparently not increased by RDSS treatments. (Auth.)

  7. Moessbauer study of the transformations occurring in egyptian alluvial and calcareous clays during firing

    International Nuclear Information System (INIS)

    Sallam, H.A.; Gomma, N.S.; El Meligy, W.M.; Eissa, N.A.

    1994-01-01

    Egyptian alluvial and calcareous clay samples, which are used in pottery production, were heated at different temperatures in air up to 1100 degree C. The physicochemical transformations were followed up and could be separated in two main stages; i) the dehydroxilation, of the clay mineral, stage for firing up to 700 degree C, ii) the second stage for firing at 900 degree C and higher. In the later stage the effect of calcium content was very pronounced. 2 figs

  8. A Study of Calcareous Deposits on Cathodically Protected Mild Steel in Artificial Seawater

    Directory of Open Access Journals (Sweden)

    Yuanfeng Yang

    2015-03-01

    Full Text Available Calcareous deposits were formed on steel under conditions of cathodic protection in artificial seawater at applied constant current densities ranging from 50 to 400 mA·m−2. The calcareous layers were characterized using a Field Emission Gun Scanning Electron Microscope (FEG SEM in conjunction with Energy Dispersive X-Ray Analysis (EDX, and Electrochemical Impedance Spectroscopy (EIS. At cathodic current densities of 50–100 mA·m−2 where corrosion was still occurring, a clear correlation existed between the iron containing corrosion product and the overlying magnesium hydroxide layer. This revealed that the mapping of magnesium rich areas on a steel surface can be used in the identification of local corrosion sites. At current densities of 150–200 mA·m−2, a layered deposit was shown to occur consisting of an inner magnesium-containing layer and an outer calcium-containing layer. At current densities of 300–400 mA·m−2, intense hydrogen bubbling through macroscopic pores in the deposits gave rise to cracking of the deposited film. Under such conditions deposits do not have a well-defined double layer structure. There is also preferential formation of magnesium-rich compounds near the steel surface at the early stages of polarisation and within the developing pores and cracks of calcareous deposits later on. Based on SEM/EDX investigation of calcareous depositions the impedance model was proposed and used to monitor in situ variations in steel corrosion resistance, and to calculate the thickness of formed deposits using the length of oxygen diffusion paths.

  9. Contrasting effects of ocean acidification on tropical fleshy and calcareous algae.

    Science.gov (United States)

    Johnson, Maggie Dorothy; Price, Nichole N; Smith, Jennifer E

    2014-01-01

    Despite the heightened awareness of ocean acidification (OA) effects on marine organisms, few studies empirically juxtapose biological responses to CO2 manipulations across functionally distinct primary producers, particularly benthic algae. Algal responses to OA may vary because increasing CO2 has the potential to fertilize photosynthesis but impair biomineralization. Using a series of repeated experiments on Palmyra Atoll, simulated OA effects were tested across a suite of ecologically important coral reef algae, including five fleshy and six calcareous species. Growth, calcification and photophysiology were measured for each species independently and metrics were combined from each experiment using a meta-analysis to examine overall trends across functional groups categorized as fleshy, upright calcareous, and crustose coralline algae (CCA). The magnitude of the effect of OA on algal growth response varied by species, but the direction was consistent within functional groups. Exposure to OA conditions generally enhanced growth in fleshy macroalgae, reduced net calcification in upright calcareous algae, and caused net dissolution in CCA. Additionally, three of the five fleshy seaweeds tested became reproductive upon exposure to OA conditions. There was no consistent effect of OA on algal photophysiology. Our study provides experimental evidence to support the hypothesis that OA will reduce the ability of calcareous algae to biomineralize. Further, we show that CO2 enrichment either will stimulate population or somatic growth in some species of fleshy macroalgae. Thus, our results suggest that projected OA conditions may favor non-calcifying algae and influence the relative dominance of fleshy macroalgae on reefs, perpetuating or exacerbating existing shifts in reef community structure.

  10. Calcareous nannoplankton and benthic foraminiferal assemblages from the Nazare Canyon (Portuguese continental margin): Preliminary results

    International Nuclear Information System (INIS)

    Guerreiro, C; Oliveira, A; Rodrigues, A; Rosa, F; Cachao, M; Fatela, F

    2009-01-01

    Submarine canyons are assumed to play an important role in oceanic/neritic circulation, marine productivity and sedimentary processes, acting as preferential conduits between the littoral and deep oceanic domain. Here we present first results of a comparative micropalaeontological study on calcareous nannoplankton and benthic foraminifera from surface sediments from the surroundings of the upper Nazare Canyon (Portuguese continental margin) and from the shelf north of the canyon. Regardless of the difficulty to distinguish taphonomical from (palaeo)ecological effects in such a complex and still poorly known marine system, the first results suggest that the canyon's hydro-sedimentary dynamic regime act as a prolongation of the shore/inner shelf hydrodynamic conditions towards west, preventing deposition and/or preservation of the smaller and fragile species of calcareous nannoplankton (e.g. E. huxleyi and G. ericsonii) and enhancing the record of the larger and more opportunistic ones (e.g. G. oceanica); and disturbing benthic foraminiferal productivity and/or diversity, or their preservation in the fossil record. Both calcareous nannoplankton and benthic foraminifera are more abundant off the canyon's domain, suggesting that its highly energetic thalweg conditions are probably filtering the fossil record in the sediment. Still, preliminary results suggest that the occurrence of persistent physical phenomena related with the canyon's morphology and proximity to the coast (e.g. solitary internal waves) may be locally promoting favourable conditions for calcareous nannoplankton, as shown by high values of nannoliths, chlorophyll a and 19' hexanoyloxyfucoxantine (unpublished data) north of the canyon's head. It is our goal to test this hypothesis in the near future by (a) studying multicore and surficial sediments from more recent surveys, and (b) calibrating the sediment results with water column data presently in process at the Institute of Oceanography (IO).

  11. Calcareous nannoplankton and benthic foraminiferal assemblages from the Nazare Canyon (Portuguese continental margin): Preliminary results

    Energy Technology Data Exchange (ETDEWEB)

    Guerreiro, C; Oliveira, A; Rodrigues, A [Division of Marine Geology, Portuguese Hydrographic Institute (IH), Rua das Trinas 49, 1249-093 Lisboa (Portugal); Rosa, F [CIACOMAR, Algarve University, Av. 16 de Julho s/n 8700-311 Olhao (Portugal); Cachao, M; Fatela, F [Geology Center and Geology Department, FCUL, Bloco C6, 3o Piso, sala 6.3.57 Campo Grande 1749-016 Lisboa (Portugal)], E-mail: catarina.guerreiro@hidrografico.pt

    2009-01-01

    Submarine canyons are assumed to play an important role in oceanic/neritic circulation, marine productivity and sedimentary processes, acting as preferential conduits between the littoral and deep oceanic domain. Here we present first results of a comparative micropalaeontological study on calcareous nannoplankton and benthic foraminifera from surface sediments from the surroundings of the upper Nazare Canyon (Portuguese continental margin) and from the shelf north of the canyon. Regardless of the difficulty to distinguish taphonomical from (palaeo)ecological effects in such a complex and still poorly known marine system, the first results suggest that the canyon's hydro-sedimentary dynamic regime act as a prolongation of the shore/inner shelf hydrodynamic conditions towards west, preventing deposition and/or preservation of the smaller and fragile species of calcareous nannoplankton (e.g. E. huxleyi and G. ericsonii) and enhancing the record of the larger and more opportunistic ones (e.g. G. oceanica); and disturbing benthic foraminiferal productivity and/or diversity, or their preservation in the fossil record. Both calcareous nannoplankton and benthic foraminifera are more abundant off the canyon's domain, suggesting that its highly energetic thalweg conditions are probably filtering the fossil record in the sediment. Still, preliminary results suggest that the occurrence of persistent physical phenomena related with the canyon's morphology and proximity to the coast (e.g. solitary internal waves) may be locally promoting favourable conditions for calcareous nannoplankton, as shown by high values of nannoliths, chlorophyll a and 19' hexanoyloxyfucoxantine (unpublished data) north of the canyon's head. It is our goal to test this hypothesis in the near future by (a) studying multicore and surficial sediments from more recent surveys, and (b) calibrating the sediment results with water column data presently in process at the Institute of

  12. Adsorption and desorption of Am(III) on calcareous soil and its parent material

    International Nuclear Information System (INIS)

    Li Weijuan; Zhang Fuming; Tao Zuyi

    2005-01-01

    The adsorption and desorption of Am(III) on a calcareous soil (sierozem) and its parent material (loess) were studied by batch technique. The molarities of the Am(III) aqueous solutions were less than 5 x 10 -9 mol/l. High adsorbability was found of Am(III) on the calcareous soil and its parent material. In order to decrease the adsorption and, hence, to investigate the adsorption characteristics properly, stable Eu 3+ as hold back carrier and analogue was added to the aqueous solution. The relative contributions of CaCO 3 , organic matter (OM) to the Am(III) adsorption on calcareous soil and its parent material were investigated. The adsorption and desorption isotherms of Am(III) on untreated soil and loess and the three kinds of treated soils and three kinds of treated loesses to remove CaCO 3 , OM and both CaCO 3 and OM were determined, respectively. It was found that all isotherms were linear, the average distribution coefficients (K d ) for the untreated soil and for the untreated loess were almost equal, while there was an obvious difference between the values of the average distribution coefficients (K d ) for the treated soil and the treated loess to remove CaCO 3 or OM. The adsorption-desorption hysteresis on the untreated and treated soils and loesses actually occurred and there was an obvious difference between the hysteresis coefficients on both the corresponding treated soil and loess. It can be concluded that the adsorbability of Am(III) on calcareous soil is similar to that on its parent material, and that the contributions of CaCO 3 and OM to the Am(III) adsorption by the untreated soil are different from those by the untreated parent material. (author)

  13. The potential of residues of furfural and biogas as calcareous soil amendments for corn seed production.

    Science.gov (United States)

    Zhao, Yunchen; Yan, Zhibin; Qin, Jiahai; Ma, Zhijun; Zhang, Youfu; Zhang, Li

    2016-04-01

    Intensive corn seed production in Northwest of China produced large amounts of furfural residues, which represents higher treatment cost and environmental issue. The broad calcareous soils in the Northwest of China exhibit low organic matter content and high pH, which led to lower fertility and lower productivity. Recycling furfural residues as soil organic and nutrient amendment might be a promising agricultural practice to calcareous soils. A 3-year field study was conducted to evaluate the effects of furfural as a soil amendment on corn seed production on calcareous soil with compared to biogas residues. Soil physical-chemical properties, soil enzyme activities, and soil heavy metal concentrations were assessed in the last year after the last application. Corn yield was determined in each year. Furfural residue amendments significantly decreased soil pH and soil bulk density. Furfural residues combined with commercial fertilizers resulted in the greater cumulative on soil organic matter, total phosphorus, available phosphorus, available potassium, and cation exchange capacity than that of biogas residue. Simultaneously, urease, invertase, catalase, and alkaline phosphatase increased even at the higher furfural application rates. Maize seed yield increased even with lower furfural residue application rates. Furfural residues resulted in lower Zn concentration and higher Cd concentration than that of biogas residues. Amendment of furfural residues led to higher soil electrical conductivity (EC) than that of biogas residues. The addition of furfural residues to maize seed production may be considered to be a good strategy for recycling the waste, converting it into a potential resource as organic amendment in arid and semi-arid calcareous soils, and may help to reduce the use of mineral chemical fertilizers in these soils. However, the impact of its application on soil health needs to be established in long-term basis.

  14. Relationships between nutrient composition of flowers and fruit quality in orange trees grown in calcareous soil

    OpenAIRE

    Pestana, M.; Beja, P.; Correia, P. J.; Varennes, Amarilis de; Faria, E. A.

    2005-01-01

    A field experiment was conducted in a commercial orange orchard (Citrus sinensis (L.) Osb. cv. ‘Valencia late’ grafted on Citrange Troyer) established on a calcareous soil in the south of Portugal, to investigate if flower analysis could be used to predict fruit quality. In April 1996, during full bloom, flowers were collected from 20 trees. In March 1997 the fruits were harvested and their quality evaluated. This procedure was repeated every year during three years. Principal Compon...

  15. Geochemistry and hydrology of a calcareous fen within the Savage Fen wetlands complex, Minnesota, USA

    Science.gov (United States)

    Komor, S.C.

    1994-01-01

    Savage Fen is a wetlands complex at the base of north-facing bluffs in the Minnesota River Valley. The complex includes 27.8 hectares of calcareous fen that host rare calciphile plants whose populations are declining in Minnesota. Water and sediment compositions in the calcareous fen were studied to gain a better understanding of the hydrologie System that sustains the rare vegetation. Groundwater in the fen is a calcium-magnesium-bicarbonate type with circumneutral pH values. The groundwater composition is the resuit of interactions among water, dissolved and gaseous carbon species, carbonates, and ion exchangers. Shallow groundwater is distinguished from deep groundwater by smaller concentrations of chloride, sulfate, magnesium, and sodium, and larger concentrations of calcium, bicarbonate, hydrogen sulfide, and ammonium. Magnesian calcite is the prevalent carbonate in unconsolidated sedimentary fill beneath the fen and is an important source and sink for dissolved calcium, magnesium, and inorganic carbon. Calcite concentrations just below the water table are small because aerobic and anaerobic oxidation of organic matter increase the partial pressure of carbon dioxide (PCO2), decrease pH, and cause calcite to dissolve. Thick calcite accumulations just above the water table, in the root zone of calciphile plants, result from water table fluctuations and attendant changes in PCO2. Groundwater beneath Savage Fen recharges in lakes and ponds south of the fen and upwells to the surface within the fen. Water at the water table is a mixture of upwelling groundwater and water near the surface that flows downslope from higher elevations in the fen. Changes in oxygen and hydrogen isotope compositions of shallow groundwater indicate that the proportion of upwelling groundwater in shallow groundwater decreases downgradient in the calcareous fen. Encroachment of reed grasses into the calcareous fen may reflect human-caused disturbances in the recharge area.

  16. Contrasting effects of ocean acidification on tropical fleshy and calcareous algae

    Directory of Open Access Journals (Sweden)

    Maggie Dorothy Johnson

    2014-05-01

    Full Text Available Despite the heightened awareness of ocean acidification (OA effects on marine organisms, few studies empirically juxtapose biological responses to CO2 manipulations across functionally distinct primary producers, particularly benthic algae. Algal responses to OA may vary because increasing CO2 has the potential to fertilize photosynthesis but impair biomineralization. Using a series of repeated experiments on Palmyra Atoll, simulated OA effects were tested across a suite of ecologically important coral reef algae, including five fleshy and six calcareous species. Growth, calcification and photophysiology were measured for each species independently and metrics were combined from each experiment using a meta-analysis to examine overall trends across functional groups categorized as fleshy, upright calcareous, and crustose coralline algae (CCA. The magnitude of the effect of OA on algal growth response varied by species, but the direction was consistent within functional groups. Exposure to OA conditions generally enhanced growth in fleshy macroalgae, reduced net calcification in upright calcareous algae, and caused net dissolution in CCA. Additionally, three of the five fleshy seaweeds tested became reproductive upon exposure to OA conditions. There was no consistent effect of OA on algal photophysiology. Our study provides experimental evidence to support the hypothesis that OA will reduce the ability of calcareous algae to biomineralize. Further, we show that CO2 enrichment either will stimulate population or somatic growth in some species of fleshy macroalgae. Thus, our results suggest that projected OA conditions may favor non-calcifying algae and influence the relative dominance of fleshy macroalgae on reefs, perpetuating or exacerbating existing shifts in reef community structure.

  17. The potential of willow for remediation of heavy metal polluted calcareous urban soils

    International Nuclear Information System (INIS)

    Jensen, Julie K.; Holm, Peter E.; Nejrup, Jens; Larsen, Morten B.; Borggaard, Ole K.

    2009-01-01

    Growth performance and heavy metal uptake by willow (Salix viminalis) from strongly and moderately polluted calcareous soils were investigated in field and growth chamber trials to assess the suitability of willow for phytoremediation. Field uptakes were 2-10 times higher than growth chamber uptakes. Despite high concentrations of cadmium (≥80 mg/kg) and zinc (≥3000 mg/kg) in leaves of willow grown on strongly polluted soil with up to 18 mg Cd/kg, 1400 mg Cu/kg, 500 mg Pb/kg and 3300 mg Zn/kg, it is unsuited on strongly polluted soils because of poor growth. However, willow proved promising on moderately polluted soils (2.5 mg Cd/kg and 400 mg Zn/kg), where it extracted 0.13% of total Cd and 0.29% of the total Zn per year probably representing the most mobile fraction. Cu and Pb are strongly fixed in calcareous soils. - Willow is suited for remediation of moderately heavy metal polluted calcareous soils

  18. Fate and Distribution of Heavy Metals in Wastewater Irrigated Calcareous Soils

    Science.gov (United States)

    Stietiya, Mohammed Hashem; Duqqah, Mohammad; Udeigwe, Theophilus; Zubi, Ruba; Ammari, Tarek

    2014-01-01

    Accumulation of heavy metals in Jordanian soils irrigated with treated wastewater threatens agricultural sustainability. This study was carried out to investigate the environmental fate of Zn, Ni, and Cd in calcareous soils irrigated with treated wastewater and to elucidate the impact of hydrous ferric oxide (HFO) amendment on metal redistribution among soil fractions. Results showed that sorption capacity for Zarqa River (ZR1) soil was higher than Wadi Dhuleil (WD1) soil for all metals. The order of sorption affinity for WD1 was in the decreasing order of Ni > Zn > Cd, consistent with electrostatic attraction and indication of weak association with soil constituents. Following metal addition, Zn and Ni were distributed among the carbonate and Fe/Mn oxide fractions, while Cd was distributed among the exchangeable and carbonate fractions in both soils. Amending soils with 3% HFO did not increase the concentration of metals associated with the Fe/Mn oxide fraction or impact metal redistribution. The study suggests that carbonates control the mobility and bioavailability of Zn, Ni, and Cd in these calcareous soils, even in presence of a strong adsorbent such as HFO. Thus, it can be inferred that in situ heavy metal remediation of these highly calcareous soils using iron oxide compounds could be ineffective. PMID:24723833

  19. The small-scale species mobility in calcareous grasslands - example from southern Poland

    Directory of Open Access Journals (Sweden)

    Wojciech Bąba

    2011-01-01

    Full Text Available In this paper I use the different measures of species mobility to describe the fine small-scale dynamics of calcareous grassland built mainly by perennial species and developed in the highly heterogeneous habitat of calcareous rocks. The community showed the low dynamics on a plot-scale (100 m2 and a high one on the scale of 1 m2. However, the studied species differed greatly in calculated indices: turnover rate, (T; 6-64, residence time (RT; 0.5-21.8 y and carousel time (CT; 4-420 y as well as the observed tendency to persistence on the spots (PERSIST and their re-colonisation (AGAIN. This allowed to distinguish the three groups of species: (1 "core species" characterized by high frequency and low T and high CT and RT values, which determine the low dynamics of a community on the plot scale, (2 species with intermediate mobility rate and (3 the group with high mobility rate. The observed cumulative frequencies of all the studied species (CFobs were much lower than expected under the random re-assignation model (CFRR. Moreover, they were also lower than those predicted by random immigration model (CFRI. The results showed that the "complex carousel" model rather than "single carousel" one explained better the small-scale dynamics of calcareous grasslands.

  20. Cathodic behaviour of stainless steel in coastal Indian seawater: calcareous deposits overwhelm biofilms.

    Science.gov (United States)

    Eashwar, M; Subramanian, G; Palanichamy, S; Rajagopal, G; Madhu, S; Kamaraj, P

    2009-01-01

    Type-316 stainless steel (SS) was investigated as the cathode in galvanic couples in full-strength seawater from the Gulf of Mannar on the southeast coast of India. Tests were devised to examine the impact of SS cathodes on anode materials with or without the accrual of marine biofilms. Biofilmed SS cathodes significantly enhanced the rate of corrosion of nickel, causing noble shifts in the couple potentials. With mild steel and zinc as the anodes, calcareous deposits developed quite rapidly on the SS cathodes and led to a significant reduction of bacterial numbers. The calcareous deposits also caused substantial reduction of galvanic corrosion rates for mild steel, whereas there was no difference for zinc. The deposits were identified by XRD as essentially carbonates, oxides and hydroxides of calcium and magnesium. Potentiodynamic polarization performed on the actual couples after disconnection and equilibration provided reasonable interpretations of the galvanic corrosion trends. Data from this work suggest that a potential of about -0.70 V vs. saturated calomel electrode (SCE) should provide optimum protection of SS in warmer, full-strength seawater that supports the precipitation of calcareous deposits. The criterion commonly recommended for temperate conditions of lower water temperature and estuarine waters of lower alkalinity is -1.0 V (SCE).

  1. INFLUENCE OF SILICEOUS AND CALCAREOUS FLY-ASHES ON PROPERTIES OF CEMENT MORTARS

    Directory of Open Access Journals (Sweden)

    Gabriela Monika Rutkowska

    2016-09-01

    Full Text Available Care of the environment in accordance with the principles of sustainable development introduces the possibility and need for waste recycling. Construction and building industries have the greatest potential for reuse of waste. The article presents the results of investigations of cement mortars – tests of compressive and tensile strength after 28 and 56 days of curing – for normative mortars and mortars containing fly ashes – calcareous and siliceous ash – in their composition. To make the samples, the Portland cement CEM I 32,5 R, 42,5R and natural aggregate with graining of 0–2 mm were used. Concrete with siliceous and calcareous admixtures was made in six lots where the ash was added in the quantity of 2%, 5%, 10% of the cement mass or the 2%, 5%, 10% of cement was replaced by ashes. After the tests, it was stated that the siliceous fly-ash admixture increases the compressive and bending strength in comparison to the mortars with the calcareous ash admixtures.

  2. Fate and Distribution of Heavy Metals in Wastewater Irrigated Calcareous Soils

    Directory of Open Access Journals (Sweden)

    Mohammed Hashem Stietiya

    2014-01-01

    Full Text Available Accumulation of heavy metals in Jordanian soils irrigated with treated wastewater threatens agricultural sustainability. This study was carried out to investigate the environmental fate of Zn, Ni, and Cd in calcareous soils irrigated with treated wastewater and to elucidate the impact of hydrous ferric oxide (HFO amendment on metal redistribution among soil fractions. Results showed that sorption capacity for Zarqa River (ZR1 soil was higher than Wadi Dhuleil (WD1 soil for all metals. The order of sorption affinity for WD1 was in the decreasing order of Ni > Zn > Cd, consistent with electrostatic attraction and indication of weak association with soil constituents. Following metal addition, Zn and Ni were distributed among the carbonate and Fe/Mn oxide fractions, while Cd was distributed among the exchangeable and carbonate fractions in both soils. Amending soils with 3% HFO did not increase the concentration of metals associated with the Fe/Mn oxide fraction or impact metal redistribution. The study suggests that carbonates control the mobility and bioavailability of Zn, Ni, and Cd in these calcareous soils, even in presence of a strong adsorbent such as HFO. Thus, it can be inferred that in situ heavy metal remediation of these highly calcareous soils using iron oxide compounds could be ineffective.

  3. Morphological characteristics of developmental stages of Acanthamoeba and Naegleria species before and after staining by various techniques.

    Science.gov (United States)

    Ithoi, Init; Ahmad, Arine-Fadzlun; Mak, J W; Nissapatorn, Veeranoot; Lau, Yee-Ling; Mahmud, Rohela

    2011-11-01

    Seven stains were studied to determine the best color and contrast for staining the developmental stages of free living pathogenic Acanthamoeba and Naegleria species. The acid-fast bacilli stain (AFB) produced a blue color without contrast; trichrome-eosin and modified Field's showed various color contrasts; Giemsa, iron-hematoxylin, modified AFB and Gram produced only one color which distinguished the nucleus, nucleolus, cytoplasm, food- and water-vacuoles. The motile organs (acanthopodia, pseudopodia, lobopodia and flagella) were also clearly differentiated but produced a similar color as the cytoplasm. These motile organelles were first induced by incubating at 37 degrees C for at least 15 minutes and then fixing with methanol in order to preserve the protruding morphology prior to staining. The trichrome-eosin and iron-hematoxylin stains showed good color contrast for detecting all three stages, the trophozoite, cyst and flagellate; Giemsa and Gram stained the trophozoite and flagellate stages; the modified Field's and modified AFB stains stained only the trophozoite stage. Depending on the purpose, all these stains (except the AFB stain) can be used to identify the developmental stages of Acanthamoeba and Naegleria for clinical, epidemiological or public health use.

  4. Activity and diversity of methane-oxidizing bacteria in glacier forefields on siliceous and calcareous bedrock

    Directory of Open Access Journals (Sweden)

    P. A. Nauer

    2012-06-01

    Full Text Available The global methane (CH4 cycle is largely driven by methanogenic archaea and methane-oxidizing bacteria (MOB, but little is known about their activity and diversity in pioneer ecosystems. We conducted a field survey in forefields of 13 receding Swiss glaciers on both siliceous and calcareous bedrock to investigate and quantify CH4 turnover based on soil-gas CH4 concentration profiles, and to characterize the MOB community by sequencing and terminal restriction fragment length polymorphism (T-RFLP analysis of pmoA. Methane turnover was fundamentally different in the two bedrock categories. Of the 36 CH4 concentration profiles from siliceous locations, 11 showed atmospheric CH4 consumption at concentrations of ~1–2 μL L−1 with soil-atmosphere CH4 fluxes of –0.14 to –1.1 mg m−2 d−1. Another 11 profiles showed no apparent activity, while the remaining 14 exhibited slightly increased CH4 concentrations of ~2–10 μL L−1 , most likely due to microsite methanogenesis. In contrast, all profiles from calcareous sites suggested a substantial, yet unknown CH4 source below our sampling zone, with soil-gas CH4 concentrations reaching up to 1400 μL L−1. Remarkably, most soils oxidized ~90 % of the deep-soil CH4, resulting in soil-atmosphere fluxes of 0.12 to 31 mg m−2 d−1. MOB showed limited diversity in both siliceous and calcareous forefields: all identified pmoA sequences formed only 5 operational taxonomic units (OTUs at the species level and, with one exception, could be assigned to either Methylocystis or the as-yet-uncultivated Upland Soil Cluster γ (USCγ. The latter dominated T-RFLP patterns of all siliceous and most calcareous samples, while Methylocystis dominated in 4 calcareous samples. Members of Upland Soil

  5. Entomopathogenic fungi-based mechanisms for improved Fe nutrition in sorghum plants grown on calcareous substrates.

    Directory of Open Access Journals (Sweden)

    Silvia Raya-Díaz

    Full Text Available Although entomopathogenic fungi (EPF are best known for their ability to protect crops against insect pests, they may have other beneficial effects on their host plants. These effects, which include promoting plant growth and conferring resistance against abiotic stresses, have been examined in recent years to acquire a better understanding of them. The primary purposes of the present study were (i to ascertain in vitro whether three different strains of EPF (viz., Metarhizium, Beauveria and Isaria would increase the Fe bioavailability in calcareous or non-calcareous media containing various Fe sources (ferrihydrite, hematite and goethite and (ii to assess the influence of the EPF inoculation method (seed dressing, soil treatment or leaf spraying on the extent of the endophytic colonization of sorghum and the improvement in the Fe nutrition of pot-grown sorghum plants on an artificial calcareous substrate. All the EPFs studied were found to increase the Fe availability during the in vitro assay. The most efficient EPF was M. brunneum EAMa 01/58-Su, which lowered the pH of the calcareous medium, suggesting that it used a different strategy (organic acid release than the other two fungi that raised the pH of the non-calcareous medium. The three methods used to inoculate sorghum plants with B. bassiana and M. brunneum in the pot experiment led to differences in re-isolation from plant tissues and in the plant height. These three inoculation methods increased the leaf chlorophyll content of young leaves when the Fe deficiency symptoms were most apparent in the control plants (without fungal inoculation as well as the Fe content of the above-ground biomass in the plants at the end of the experiment. The total root lengths and fine roots were also increased in response to fungal applications with the three inoculation methods. However, the soil treatment was the most efficient method; thus, its effect on the leaf chlorophyll content was the most

  6. Stain Deconvolution Using Statistical Analysis of Multi-Resolution Stain Colour Representation.

    Directory of Open Access Journals (Sweden)

    Najah Alsubaie

    Full Text Available Stain colour estimation is a prominent factor of the analysis pipeline in most of histology image processing algorithms. Providing a reliable and efficient stain colour deconvolution approach is fundamental for robust algorithm. In this paper, we propose a novel method for stain colour deconvolution of histology images. This approach statistically analyses the multi-resolutional representation of the image to separate the independent observations out of the correlated ones. We then estimate the stain mixing matrix using filtered uncorrelated data. We conducted an extensive set of experiments to compare the proposed method to the recent state of the art methods and demonstrate the robustness of this approach using three different datasets of scanned slides, prepared in different labs using different scanners.

  7. Investigation of black soot staining in houses

    Energy Technology Data Exchange (ETDEWEB)

    Fugler, D. [Canada Mortgage and Housing Corp., Ottawa, ON (Canada)

    2000-07-01

    Air quality investigators are frequently called upon to determine the origin of streaking, staining or soot marks in both new and old homes. Those marks display common characteristics: black marks along baseboards at interior or exterior walls, behind furniture and at doorways; black smudges on window frames and plastic cabinets; and even shadowing of studs on exterior wall drywall in a few cases. In most instances, carbon soot from a combustion source is the culprit. The combustion sources include furnaces, water heaters, fireplaces, gas dryers, gas ranges, smoking, vehicle exhaust and candle burning. Scepticism about candle soot is prevalent among callers. As a result, a study was initiated in homes where occupants burn candles regularly to investigate soot problems. Samples were collected from five homes, and included stained carpets, filters, and swab samples of black dust or soot. All the houses selected for the study had been built within a three-year period. Some samples of candles commonly burned in those homes were burnt in a laboratory. Air quality audits had been performed in the homes and had revealed other potential pollutant sources. Best practices for cost-effective clean up and control of soot were researched in industry information. The tests conducted in the laboratory found materials consistent with candle soot or residue during microscopic investigations, but no link was established with the stained material obtained from the homes. A few tips for homeowners were included concerning candle burning, and tips for builders were also offered. 1 tab.

  8. The comparison of pyrosequencing molecular Gram stain, culture, and conventional Gram stain for diagnosing orthopaedic infections.

    Science.gov (United States)

    Kobayashi, Naomi; Bauer, Thomas W; Tuohy, Marion J; Lieberman, Isador H; Krebs, Viktor; Togawa, Daisuke; Fujishiro, Takaaki; Procop, Gary W

    2006-08-01

    We have developed a combined real-time PCR and pyrosequencing assay that successfully differentiated the vast majority of gram-positive and gram-negative bacteria when bacterial isolates were tested. The purpose of this study was to evaluate this assay on clinical specimens obtained from orthopedic surgeries, and to prospectively compare the results of "molecular Gram stain" with culture and conventional direct Gram stain. Forty-five surgical specimens were obtained from patients who underwent orthopedic surgery procedures. The DNA was extracted and a set of broad-range PCR primers that targeted a part of the 16S rDNA gene was used for pan-bacterial PCR. The amplicons were submitted for pyrosequencing and the resulting molecular Gram stain characteristics were recorded. Culture and direct Gram staining were performed using standard methods for all cases. Surgical specimens were reviewed histologically for all cases that had a discrepancy between culture and molecular results. There was an 86.7% (39/45) agreement between the traditional and molecular methods. In 12/14 (85.7%) culture-proven cases of bacterial infection, molecular Gram stain characteristics were in agreement with the culture results, while the conventional Gram stain result was in agreement only for five cases (35.7%). In the 31 culture negative cases, 27 cases were also PCR negative, whereas 4 were PCR positive. Three of these were characterized as gram negative and one as gram positive by this molecular method. Molecular determination of the Gram stain characteristics of bacteria that cause orthopedic infections may be achieved, in most instances, by this method. Further studies are necessary to understand the clinical importance of PCR-positive/culture-negative results.

  9. Diagnostic performance of dual-staining cytology for cervical cancer screening: A systematic literature review.

    Science.gov (United States)

    Tjalma, Wiebren A A

    2017-03-01

    Cervical cancer screening saves lives. Secondary prevention in cervical cancer screening relies on the results of primary cytology and/or HPV testing. However, primary screening with cytology has a low sensitivity, and HPV screening has a low specificity. This means that either cancers are missed, or women are over-treated. To improve performance outcomes, the concept of dual-stain cytology (CINtec ® PLUS Cytology test) has been introduced. In this approach, additional staining with p16/Ki-67 is performed in cases where cytology results are abnormal (LSIL or ASCUS) and/or HPV-positive. Another way to describe this approach might be "diagnostic" cytology. In order to assess the value of this "diagnostic cytology", a systematic literature review was conducted of dual-stain cytology performance across multiple studies until May 2016. In a Belgian screening population (women age 25-65 years), dual-stain cytology was significantly more sensitive (66%) and slightly less specific (-1.0%) than cytology. In the population referred to colposcopy or with abnormal cytology (ASCUS, LSIL), dual-staining showed a significantly higher increase in specificity, and a slightly lower sensitivity than HPV testing. Specificity gains resulted in fewer false positives and an increase in the number of correct referrals to colposcopy. Dual-staining with p16/Ki-67 cytology is an attractive biomarker approach for triage in cervical cancer screening. Copyright © 2017 Elsevier B.V. All rights reserved.

  10. Histological Stains: A Literature Review and Case Study.

    Science.gov (United States)

    Alturkistani, Hani A; Tashkandi, Faris M; Mohammedsaleh, Zuhair M

    2015-06-25

    The history of histology indicates that there have been significant changes in the techniques used for histological staining through chemical, molecular biology assays and immunological techniques, collectively referred to as histochemistry. Early histologists used the readily available chemicals to prepare tissues for microscopic studies; these laboratory chemicals were potassium dichromate, alcohol and the mercuric chloride to harden cellular tissues. Staining techniques used were carmine, silver nitrate, Giemsa, Trichrome Stains, Gram Stain and Hematoxylin among others. The purpose of this research was to assess past and current literature reviews, as well as case studies, with the aim of informing ways in which histological stains have been improved in the modern age. Results from the literature review has indicated that there has been an improvement in histopathology and histotechnology in stains used. There has been a rising need for efficient, accurate and less complex staining procedures. Many stain procedures are still in use today, and many others have been replaced with new immunostaining, molecular, non-culture and other advanced staining techniques. Some staining methods have been abandoned because the chemicals required have been medically proven to be toxic. The case studies indicated that in modern histology a combination of different stain techniques are used to enhance the effectiveness of the staining process. Currently, improved histological stains, have been modified and combined with other stains to improve their effectiveness.

  11. Isolation and identification of ferric reducing bacteria and evaluation of their roles in iron availability in two calcareous soils

    Science.gov (United States)

    Ghorbanzadeh, N.; Lakzian, A.; Haghnia, G. H.; Karimi, A. R.

    2014-12-01

    Iron is an essential element for all organisms which plays a crucial role in important biochemical processes such as respiration and photosynthesis. Iron deficiency seems to be an important problem in many calcareous soils. Biological dissimilatory Fe(III) reduction increases iron availability through reduction of Fe(III) to Fe(II). The aim of this study was to isolate, identify and evaluate some bacterial isolates for their abilities to reduce Fe(III) in two calcareous soils. Three bacterial isolates were selected and identified from paddy soils by using 16S rRNA amplification and then inoculated to sterilized and non-sterilized calcareous soils in the presence and absence of glucose. The results showed that all isolates belonged to Bacillus genus and were capable of reducing Fe(III) to Fe(II) in vitro condition. The amount of Fe(III) reduction in sterilized calcareous soils was significantly higher when inoculated with PS23 isolate and Shewanella putrefaciens ( S. putrefaciens) (as positive control) compared to PS16 and PS11 isolates. No significant difference was observed between PS11 and PS16 isolates in the presence of indigenous microbial community. The results also revealed that glucose had a significant effect on Fe(III) reduction in the examined calcareous soil samples. The amount of Fe(III) reduction increased two-fold when soil samples were treated with glucose and inoculated by S. putrefaciens and PS23 in non-sterilized soils.

  12. Calcareous forest seepages acting as biodiversity hotspots and refugia for woodland snail faunas

    Science.gov (United States)

    Horsák, Michal; Tajovská, Eva; Horsáková, Veronika

    2017-07-01

    Land-snail species richness has repeatedly been found to increase with the increasing site calcium content and humidity. These two factors, reported as the main drivers of land-snail assemblage diversity, are also among the main habitat characteristics of calcareous seepages. Here we explore local species richness and compositional variation of forest spring-fed patches (i.e. seepages), to test the hypothesis that these habitats might act as biodiversity hotspots and refugia of regional snail faunas. In contrast to treeless spring fens, only little is known about land snail faunas inhabiting forest seepages. Studying 25 isolated calcareous forest seepages, evenly distributed across the White Carpathians Protected Landscape Area (SE Czech Republic), we found that these sites, albeit spatially very limited, can harbour up to 66% of the shelled land-snail species known to occur in this well-explored protected area (in total 83 species). By comparing land snail assemblages of the studied seepages with those occurring in the woodland surroundings of each site as well as those previously sampled in 28 preserved forest sites within the study area, we found the seepages to be among the most species rich sites. Although the numbers of species did not statistically differ among these three systems, we found highly significant differences in species composition. Seepage faunas were composed of many species significantly associated with spring sites, in contrast to the assemblages of both surrounding and preserved forest sites. Our results highly support the hypothesis that calcareous forest seepages might serve as refugia and biodiversity hotspots of regional land snail faunas. Protection of these unique habitats challenges both conservation plans and forest management guidelines as they might act as sources for the recolonization and restoration of forest snail assemblages particularly in areas impoverished by harvesting and clearcutting.

  13. EARLY TO LATE OLIGOCENE CALCAREOUS NANNOFOSSIL BIOEVENTS IN THE MEDITERRANEAN (UMBRIA-MARCHE BASIN, CENTRAL ITALY

    Directory of Open Access Journals (Sweden)

    PATRIZIA MAIORANO

    2006-07-01

    Full Text Available Calcareous nannofossil assemblages have been investigated by means of quantitative analyses in three Oligocene pelagic sections located in the Umbria-Marche Apennines (Central Italy. The studied sections mainly consist of marly limestones and marls belonging to the Scaglia Cinerea Formation, and include the interval between NP23 and NP25 representing a time interval of about 3.5 Ma. Biostratigraphic resolution is extremely low and only two standard bioevents are known, which are the FO of Sphenolithus ciperoensis and the LO of Sphenolithus distentus. The distribution patterns of poorly known or recently described calcareous nannofossils provided a valuable tool for improving the current biostratigraphic framework. The studied interval is characterized by significant changes in the calcareous nannofossil assemblages and by several extinction events. The last occurrence (LO and/or the last common occurrence (LCO here proposed are: the LO of Sphenolithus akropodus, the LO of Reticulofenestra circus, the LCO of Helicosphaera ethologa, the LCO of Helicosphaera compactathe LO of Discoaster tanii nodifer. The reversal in abundance between Sphenolithus predistentus and S. distentus provided an additional biostratigraphic constraint at the NP23-NP24 transition. In addition biometric criteria enabled the recognition of the first common occurrence (FCO of Cyclicargolithus abisectus > 12 mm as potential bioevent within NP24. The quantitative distribution of Sphenolithus distentus suggests to rely on the LCO of the species rather than on the LO, for the identification of NP24-NP25 boundary. The identified bioevents is a first step towards the improvement of the present Mediterranean biostratigraphic framework of the Oligocene geological record. A preliminary correlation of the bioevents to the Geomagnetic Polarity Time Scale is presented.

  14. Reducing As availability in calcareous soils using nanoscale zero valent iron.

    Science.gov (United States)

    Azari, Prisa; Bostani, Abdol Amir

    2017-09-01

    Different methods, including the use of nanoscale zero-valent iron (NZVI), have been used to treat arsenic (As)-contaminated environments, with much less data on the use of NZVI in arsenic-calcareous-polluted soils. Accordingly, two different experiments were conducted to investigate the effects of NZVI on the removal of As from three different calcareous-polluted soils. In the first experiment, the effects of soil type (differing in the rate of clay particles and organic carbon including S1 (8.0 and 0.05%), S2 (20 and 0.2%), and S3 (20.5 and 0.8%)) and NZVI concentration (0, 50, and 100 g kg -1 of dry soil) on the removal of As extractable with distilled water were evaluated using a factorial design with three replicates. In the second experiment, the NZVI concentrations were reduced to 0, 2.5, 5.0, and 25 g kg -1 , and the NZVI contact time (0.5, 48, 96, 192, 384, and 768 h) was also tested. The analysis of variance in both experiments indicated the significant effects (P soils, with increasing NZVI concentration and contact time, the concentration of available As in the solution phase significantly decreased (P = 0.01). S3, due to a higher rate of organic matter, was less responsive to the NZVI treatments than the other soils. The effectiveness of the nanoremediation method, tested in this research work, on the stabilization of As in calcareous soils, is verified.

  15. Potential use of calcareous mudstones in low hydraulic conductivity earthen barriers for environmental applications.

    Science.gov (United States)

    Musso, T B; Francisca, F M; Musso, T B; Musso, T B

    2013-01-01

    Earthen layers play a significant role in isolating contaminants in the subsurface, controlling the migration of contaminant plumes, and as landfill liners and covers. The physical, chemical and mineralogical properties of three calcareous mudstones from the Jagüel and Roca formations in North Patagonia, Argentina, are evaluated to determine their potential for the construction of liners. These mudstones were deposited in a marine environment in the Upper Cretaceous-Paleocene. The tested specimens mainly comprise silt and clay-sized particles, and their mineralogy is dominated by a smectite/illite mixed layer (70-90% Sm) and calcite in smaller proportion. Powdered mudstone samples have little viscosity and swelling potential when suspended in water. The hydraulic conductivity of compacted mudstones and sand-mudstone mixtures is very low (around 1-3 x 10(-10) m/s) and in good agreement with the expected hydraulic behaviour of compacted earthen layers. This behaviour can be attributed to the large amount of fine particles, high specific surface and the close packing of particles as confirmed by scanning electron microscope analysis. The tested materials also show a high cation exchange capacity (50-70 cmol/kg), indicating a high contaminant retardation capability. The calcareous mudstones show satisfactory mineralogical and chemical properties as well as an adequate hydraulic behaviour, demonstrating the potential use of these materials for the construction of compacted liners for the containment of leachate or as covers in landfills. These findings confirm the potential usage of marine calcareous mudstones as a low-cost geomaterial in environmental engineering projects.

  16. Relationships of 137Cs inventory with magnetic measures of calcareous soils of hilly region in Iran

    International Nuclear Information System (INIS)

    Ayoubi, Shamsollah; Ahmadi, Mohamamd; Abdi, Mohammad Reza; Abbaszadeh Afshar, Farideh

    2012-01-01

    Erosion is a natural process, but it has been dramatically increased by human activities; and this adversely influences soil productivity and environmental quality. For quantification of soil erosion, several techniques including the use of Cs-137 have been employed. This study was conducted to explore the relationships of Cs-137 inventory with magnetic properties in calcareous soils in western Iran. Ten transects were selected in the hilly region in Chelgerd district of Iran. Soil samples from 0 to 30 and 30–50 cm depths were collected from fifty points to determine Cs-137 inventory, magnetic measures and selected physico-chemical properties (in total there were 100 soil samples). The results showed that simple mass balance model (SMBM) estimated a gross erosion rate of 29.6 t ha −1 yr −1 and a net soil deposition of 21.8 t ha −1 yr −1 ; hence, a net soil loss of 9.6 t ha −1 yr −1 and a sediment delivery ratio of 31.4%. Simple linear regression and non-linear regression analysis showed that mass magnetic susceptibility (χ lf ) explained only 33.64% and 45% of variability in Cs-137 in the transects studied. The results of multiple linear regression analysis of 137 Cs with magnetic parameters and physico-chemical properties indicated that extractable potassium and χ lf explained approximately 61% of the total variability in 137 Cs in the area studied. Overall, the results suggest that further research is needed for the use of magnetic characteristics as an alternative technique in place Cs-137 methodology for calcareous soils. - Highlights: ► Simple linear regression mass magnetic susceptibility (χ L ) explained only 33.64 % of Cs-137 variability. ► Non-linear regression model explained 45% of variability in Cs-137 in the transects studied. ► Magnetic Susceptibility measures could not directly be used in calcareous soils to evaluate soil redistribution. ► Magnetic characteristics as an alternative technique instead of Cs-137 in calcareous

  17. Palaeoenvironmental changes in the Late Triassic (Rhaetian) of the Northern Calcareous Alps

    DEFF Research Database (Denmark)

    Mette, Wolfgang; Elsler, Armin; Korte, Christoph

    2012-01-01

    in the Kössen Formation and determine their significance for environmental and climatic conditions in the Rhaetian sea of the Eiberg Basin (Northern Calcareous Alps). For this purpose 60 δ 18O measurements on 43 articulate brachiopods samples from 8 different horizons were carried out. The results indicate...... to the lowest unit 3 of the Eiberg Member that parallels oxygen isotopes. This positive δ 13C trend is interrupted by a sudden ~1.5‰ negative excursion in the late Rhaetian (Late Rhaetian Event), a time span when the oxygen isotopes remain heavy....

  18. Mining and geologic characterization of calcareous resources for the cement industry in Uruguay

    International Nuclear Information System (INIS)

    De Santana, H.; Veroslavsky, G.; Sanchez, L.; Rossini, C.; Aubet, N.; Loureiro, J.; Gutierrez, L.

    2000-01-01

    The main objective of this work was the study of geological and mining potential that Uruguay has on limestone rocks rich in calcium and poor in magnesium and silica, which are considered primary requirements suitable for the manufacture of cement. The results obtained allow defining four major regions of the country that although do not include all occurrences of calcareous rocks, they do not constitute the most important areas concerning: rock quality, higher volumes and improved extraction possibilities. The areas are: Queguay, Minas, Carape and Treinta y tres

  19. Biot's coefficient as an indicator of strength and porosity reduction: Calcareous sediments from Kerguelen Plateau

    DEFF Research Database (Denmark)

    Alam, Mohammad Monzurul; Borre, Mai Kirstine; Fabricius, Ida Lykke

    2010-01-01

    β to fall, even when porosity remains constant. Biot's coefficient correlates with strength-indicating properties: compressional and shear modulus, oedometer modulus, yield strength, strain from direct loading and creep strain. Our data indicate that β may be used for predicting the diagenetic...... Biot's coefficient, β. In calcareous ooze, β is one. Mechanical compaction reduces porosity, but only leads to a minor decrease in β. Recrystallization renders particles smoother, but does not lead to reduction in β unless it gives rise to pore stiffening cementation. Pore stiffening cementation causes...

  20. The calcareous mires in South-East Poland are home to two rare Anthracoidea species

    Directory of Open Access Journals (Sweden)

    Marcin Piątek

    2013-12-01

    Full Text Available The new collections of Anthracoidea buxbaumii Kukkonen on Carex buxbaumii Wahlenb. and Anthracoidea hostianae B.Lindeb. ex Nannf. on Carex lepidocarpa Tausch recorded in the calcareous mires in South-East Poland are described, illustrated and discussed. The holotype of the latter smut is also re-examined, described and illustrated in detail. Anthracoidea buxbaumii is reported for the second time from Poland on a new host plant. Anthracoidea hostianae is new to Poland. The variability of spore sizes of both species is discussed. The conspecificity of Anthracoidea buxbaumii and A. hostianae suggested in the literature is analyzed.

  1. Port wine stain on a child's face (image)

    Science.gov (United States)

    Port wine stains are always present at birth. In an infant, they are flat, pink, vascular lesions. Common locations ... may be present anywhere on the body. Port wine stains may appear in association with other syndromes.

  2. Modified Genta triple stain for identifying Helicobacter pylori.

    OpenAIRE

    el-Zimaity, H M; Wu, J; Graham, D Y

    1999-01-01

    AIM: To evaluate whether lead nitrate could replace uranyl nitrate in the Genta stain for H pylori without sacrificing the advantages of the triple stain (Steiner silver impregnation combined with Alcian blue and haematoxylin/eosin (H&E)). METHODS: A comparison was made in 16 specimens between the original triple stain and the revised version. One pathologist evaluated all sections. RESULTS: Direct substitution of lead nitrate for uranium nitrate produced well stained organisms without interf...

  3. Utility of Modified Ultrafast Papanicolaou Stain in Cytological Diagnosis.

    Science.gov (United States)

    Sinkar, Prachi; Arakeri, Surekha Ulhas

    2017-03-01

    Need for minimal turnaround time for assessing Fine Needle Aspiration Cytology (FNAC) has encouraged innovations in staining techniques that require lesser staining time with unequivocal cell morphology. The standard protocol for conventional Papanicolaou (PAP) stain requires about 40 minutes. To overcome this, Ultrafast Papanicolaou (UFP) stain was introduced which reduces staining time to 90 seconds and also enhances the quality. However, reagents required for this were not easily available hence, Modified Ultrafast Papanicolaou (MUFP) stain was introduced subsequently. To assess the efficacy of MUFP staining by comparing the quality of MUFP stain with conventional PAP stain. FNAC procedure was performed by using 10 ml disposable syringe and 22-23 G needle. Total 131 FNAC cases were studied which were lymph node (30), thyroid (38), breast (22), skin and soft tissue (24), salivary gland (11) and visceral organs (6). Two smears were prepared and stained by MUFP and conventional PAP stain. Scores were given on four parameters: background of smears, overall staining pattern, cell morphology and nuclear staining. Quality Index (QI) was calculated from ratio of total score achieved to maximum score possible. Statistical analysis using chi square test was applied to each of the four parameters before obtaining the QI in both stains. Students t-test was applied to evaluate the efficacy of MUFP in comparison with conventional PAP stain. The QI of MUFP for thyroid, breast, lymph node, skin and soft tissue, salivary gland and visceral organs was 0.89, 0.85, 0.89, 0.83, 0.92, and 0.78 respectively. Compared to conventional PAP stain QI of MUFP smears was better in all except visceral organ cases and was statistically significant. MUFP showed clear red blood cell background, transparent cytoplasm and crisp nuclear features. MUFP is fast, reliable and can be done with locally available reagents with unequivocal morphology which is the need of the hour for a cytopathology set-up.

  4. Discriminative staining methods for the nervous system: luxol fast blue--periodic acid-Schiff--hematoxylin triple stain and subsidiary staining methods.

    Science.gov (United States)

    Goto, N

    1987-09-01

    This paper describes a new series of staining methods which can discriminatively demonstrate every structure of the nervous system, including axons and capillaries, in animal and human materials. Methods described in this paper consist of one primary stain, luxol fast blue-periodic acid Schiff-hematoxylin (LPH) and six different subsidiary staining methods. The LPH triple stain can precisely differentiate the following structures: neurons (Nissl bodies, cytoplasm, nuclear membrane and nucleolus), various kinds of nuclei (glia, ependyma, endothelium, leucocyte, connective tissue, etc.), myelin sheaths, neuronal processes (axons and dendrites), reacted glial cell bodies (protoplasmic astrocytes, foamy cells, etc.), blood vessels (arteries, veins and capillaries), meninges, intervening connective tissue, erythrocytes, lipofuscin granules, amyloid bodies, and others. Subsidiary staining methods are also described briefly. Applications are discussed in the context of staining technology and neuromorphological research.

  5. 7 CFR 28.442 - Middling Yellow Stained Color.

    Science.gov (United States)

    2010-01-01

    ... 7 Agriculture 2 2010-01-01 2010-01-01 false Middling Yellow Stained Color. 28.442 Section 28.442... Stained Color. Middling Yellow Stained Color is American Upland cotton which in color is deeper than Middling Tinged Color. [57 FR 34498, Aug. 5, 1992] below color grade cotton ...

  6. 7 CFR 28.441 - Strict Middling Yellow Stained Color.

    Science.gov (United States)

    2010-01-01

    ... 7 Agriculture 2 2010-01-01 2010-01-01 false Strict Middling Yellow Stained Color. 28.441 Section... Strict Middling Yellow Stained Color. Strict Middling Yellow Stained Color is color which is deeper than that of Strict Middling Tinged Color. [57 FR 34498, Aug. 5, 1992] ...

  7. CD3 immunohistochemical staining in diagnosis of lymphocytic colitis

    DEFF Research Database (Denmark)

    Fiehn, Anne-Marie Kanstrup; Engel, Ulla; Holck, Susanne

    2016-01-01

    and eosin (HE) stainings were available. At the second assessment, a supplementary CD3 immunohistochemical staining was also available. The aim was to evaluate whether a supplementary CD3 would increase the diagnostic agreement among pathologists, and whether a CD3 stain would change the diagnosis based...

  8. Dried gamma-irradiated sewage solids use on calcareous soils: crop yeilds and heavy metals uptake

    International Nuclear Information System (INIS)

    McCaslin, B.D.; Sivinski, J.S.

    1979-01-01

    Experiments designed to examine gamma-radiation effects on extractable and plant-available sludge elements and to examine the response of crops to sludge applications on two typical, calcareous soils in New Mexico are summarized. Information has been given indicating that the radiation process of reducing pathogens in sewage products being developed by Sandia Laboratories, does not significantly increase the chemical extractability and plant uptake of a broad range of nutrients and heavy metals. However, radiation treatment greatly facilitates handling sewage for experimentation, because pathogen contamination precautions are eliminated and weed seeds killed. Studies on the effects of sludge irradiation on plant nutrient uptake revealed no concentration increases, agreeing with results presented herein. Sewage products may have special potential for use on calcareous soils, such as in New Mexico. For instance, in New Mexico the lack of potassium in sewage products is not a problem and the naturally high pH of New Mexico soil greatly reduces plant availability of many problem heavy metals. Dramatic increases in yield are typified by the greenhouse and field results presented herein, especially for the known micronutrient deficient soils of New Mexico. Results indicate that sewage sludge is an excellent Zn and Fe fertilizer. More research needs to be done before the economics of sludge application can be calculated and more field information is needed before irradiated sewage products are used indiscriminately

  9. DRY CALCAREOUS GRASSLAND COMMUNITIES (FILIPENDULA VULGARIS-HELICTOTRICHON PRATENSE IN WESTERN AND CENTRAL LATVIA

    Directory of Open Access Journals (Sweden)

    S. RUSINA

    2003-06-01

    Full Text Available The dry calcareous grassland vegetation of Westem and Central Latvia is described based on 93 rclevés, Ali relevés could be assigned to one community type Filipendula vulgaris-Helictotrichon pratense named according to dominant species. Four variants were distinguished: typicum, Viscaria vulgaris, Astragalus danicus and Carex flacca. Ellenberg indìcator values were calculated to study the ecology of communities. Floristic differences among variants are associated mainly with soil reaction (Ellenberg indicator values for soil pH range from 6.0 to 7.6, but conditions of moisture and fertility are similar among the variants. The calcareous grassland vegetation in Latvia represents transition vegetation between the c1asses Molinio-Arrhenatheretea and Festuco-Brometea. However, ecologically and floristically, these communities are closer to the class Festuco-Brometea and could be assigned to the order Brometalia. For designation to alliance and associations, more data is required. The results are compared with similar communities in other European countries.

  10. Pleistocene calcareous nannofossil biochronology at IODP Site U1385 (Expedition 339)

    Science.gov (United States)

    Balestra, B.; Flores, J.-A.; Hodell, D. A.; Hernández-Molina, F. J.; Stow, D. A. V.

    2015-12-01

    During Integrated Ocean Drilling Program (IODP) Expedition 339, Site U1385 (37°34‧N, 10°7‧W, 2578 m below sea level) was drilled in the lower slope of the Portuguese margin, to provide a marine reference section of Pleistocene millennial-scale climate variability. Five holes were cored using the Advanced Piston Corer (APC) to a depth of ~ 151 m below sea floor (mbsf) recovering a continuous stratigraphic record covering the past 1.4 Ma. Here we present results of the succession of standard and unconventional calcareous nannofossil biostratigraphic events. The quantitative study of calcareous nannofossils showed well-preserved and abundant assemblages throughout the core. Most conventional Pleistocene events were recognized and the timing of bioevents were calibrated using correlation to the new oxygen isotope stratigraphy record developed for the Site U1385. The analyses provide further data on the stratigraphic distribution of selected species and genera, such as the large Emiliania huxleyi (> 4 μm), Gephyrocapsa caribbeanica, Helicosphaera inversa, Gephyrocapsa omega and Reticulofenestra asanoi (> 6 μm) and other circular-subcircular small reticulofenestrids, resulting in new insights into the environmental control of their stratigraphic patterns. Finally, the comparison between nannofossil datums and oxygen isotope stratigraphy on the same samples has resulted in an accurate revision of timing of the events, providing valuable biochronologic information.

  11. Characterization of commercial iron chelates and their behavior in an alkaline and calcareous soil.

    Science.gov (United States)

    Cantera, Rodrigo G; Zamarreño, Angel M; García-Mina, José M

    2002-12-18

    Iron deficiency is a common problem for many plants grown in alkaline and calcareous soils. To correct this problem, iron is supplied to plants as chelates. Several iron chelates are sold under diverse trademarks with different characteristics. This work evaluated 18 commercial products containing the most representative chelated iron sources used in agricultural practice in Spain when the study was done, namely the ferric chelates of EDDHA, EDDHMA, EDDCHA, EDDHSA, EDTA, and DTPA. The chelates were comprehensively characterized and quantitated by several techniques, including several chromatographic methods. Iron and chelate dynamics in soil were also studied in a model alkaline and calcareous soil. Results indicate that, in this model soil, among the different iron compounds studied only FeEDDHA and analogues have the capacity to maintain soluble iron in soil solution over time. These results are in agreement with general experience under field conditions. Furthermore, among the different ortho-ortho isomers of FeEDDHA's, FeEDDHSA and FeEDDCHA showed greater capacity than FeEDDHA and FeEDDHMA to maintain the chelated iron in soil solution over time.

  12. LEAF MINERAL CONCENTRATION OF FIVE OLIVE CULTIVARS GROWN ON CALCAREOUS SOIL

    Directory of Open Access Journals (Sweden)

    Igor Pasković

    2013-12-01

    Full Text Available There are limited numbers of scientific publication regarding genotypic differences which exist among olive cultivars concerning nutrient uptake and translocation. For that purpose, the object of our study was to determine possible differences between leaf mineral content of five selected olive cultivars since leaf nutrient analysis is consider being the best method for diagnosing olive tree nutritional status. Plant material was obtained from an olive collection, grown on calcareous soil maintained at Institute of Adriatic Crops and Karst Reclamation, Split, Croatia. The study was conducted with two Croatian autochthonous olive cultivars (“Istarska bjelica”, “Lastovka”, two Italian cultivars (“Pendolino”, “Leccino” and one Spanish cultivar (“Hojiblanca”. Completely randomized design was applied. This study has shown questionably low Mg concentration in all olive cultivars with exception for “Hojiblanca” cultivar. Also, only Croatian cultivars “Istarska bjelica” and “Lastovka” as well as Spanish cultivar “Hojiblanca” recorded sufficient levels of iron leaf mineral content. Regarding other elements studied (P, K, Ca, Zn, Mn, Cu all cultivars were above literature cited thresholds for possible deficiencies. Selected olive cultivars in our experiment demonstrated different nutrient leaf concentration, which is of particular importance for fertilization requirements and fertilization practice in Croatian orchards grown on calcareous soil.

  13. Histochemical and ultrastructural studies on the calcareous corpuscles and eggs of Taenia taeniaeformis and Dipylidium caninum.

    Science.gov (United States)

    Khalifa, Refaat M A; Mazen, Nawal A M; Marawan, Aziza M A; Thabit, Hasnaa T M

    2011-08-01

    Calcareous corpuscles were noticed by several previous workers to be present in larval and adult cestodes without knowing their function. However, nothing was mentioned in the available literature about distribution of these corpuscles and their density, structure and composition in different parts of the body of different cestodes. Hence, in the present work, a comparative study of their distribution, density, histochemical and ultrastructural characters in different parts of the body was performed in Taenia taeniaeformis and Dipylidium caninum. Due to the presence of the eggs in their gravid segments, their histochemical and ultrastructural characteristics were also studied. It was found that the size, location and density of the calcareous bodies were different in different body parts of the same and the other cestode. Histochemically, the main component of these corpuscles was calcium; while other constituents as polysaccharides, lipids, protrins and mucopolysaccharides were found in their outer rim. Ultrastructurally, they were quite similar in the two studied cestodes and different stages of their development were exhibited. Histochemically, the eggs of both cestodes were similar in their contents. However, some ultrastructural differences have been demonstrated particularly in relation to the size and shape of the rods in the embryophore and the structures in between the embryophore and onchosphere.

  14. Adsorption and co-adsorption of diclofenac and Cu(II) on calcareous soils.

    Science.gov (United States)

    Graouer-Bacart, Mareen; Sayen, Stéphanie; Guillon, Emmanuel

    2016-02-01

    Pharmaceuticals are emerging contaminants and their presence in different compartments of the environment has been detected in many countries. In this study, laboratory batch experiments were conducted to characterize the adsorption of diclofenac, a widely used non-steroidal anti-inflammatory drug, on six calcareous soils. The adsorption of diclofenac was relatively low, which may lead to a risk of groundwater contamination and plant uptake. A correlation between the soil-water distribution coefficient Kd and soil characteristics has been highlighted. Indeed, diclofenac adsorption as a function of soil organic matter content (% OM) and Rt=% CaCO3/% OM was successfully described through a simple empirical model, indicating the importance of considering the inhibiting effect of CaCO3 on OM retention properties for a better assessment of diclofenac fate in the specific case of calcareous soils. The simultaneous co-adsorption of diclofenac and copper - a ubiquitous pollutant in the environment - at the water/soil interface, was also investigated. It appeared quite unexpectedly that copper did not have a significant influence on diclofenac retention. Copyright © 2015 Elsevier Inc. All rights reserved.

  15. Sinemurian–Pliensbachian calcareous nannofossil biostratigraphy and organic carbon isotope stratigraphy in the Paris Basin

    DEFF Research Database (Denmark)

    Peti, Leonie; Thibault, Nicolas Rudolph; Clemence, Marie-Emilie

    2017-01-01

    The biostratigraphy of Sinemurian to lower Toarcian calcareous nannofossils has been investigated in the Sancerre-Couy core (Paris Basin), which contains a mixed assemblage of species with affinities to the northern and southern areas of the peri-tethyan realm, thus allowing for the use and calib......The biostratigraphy of Sinemurian to lower Toarcian calcareous nannofossils has been investigated in the Sancerre-Couy core (Paris Basin), which contains a mixed assemblage of species with affinities to the northern and southern areas of the peri-tethyan realm, thus allowing for the use...... organic carbon isotope curve based on 385 data points. The main bioevents, i.e. the first occurrences of Parhabdolithus liasicus, Crepidolithus pliensbachensis, Crepidolithus crassus, Mitrolithus lenticularis, Similiscutum cruciulus sensu lato, Lotharingius hauffii, Crepidolithus cavus and Lotharingius...... between the different domains. In addition to the nine main bioevents used for the biozonation of the core, we document an additional 50 distinct bioevents, evaluate their reliability and discuss their potential significance by comparison to previous studies. A total of five significant negative organic...

  16. The siliceous-calcareous-argillaceous rock type uranium deposit in south subzone of Western Qinling

    International Nuclear Information System (INIS)

    Qian Farong; Zhou Dean; Ji Hongfang

    1995-11-01

    The siliceous-calcareous-argillaceous rock type uranium deposit in south subzone of western Qinling is an inland found type deposit with specific mineralization and good potentiality. The mineralization distributes along definite horizons and occurs in siliceous layer and lenses of siliceous-calcareous rocks. Orebody presents in forms of stratoid, lenticular and irregular veins and controlled by factorial structures. Ore is identified as massive and sandy and each characterized by various mineral compositions and element associations. The study shows that the mineralizing materials are mainly derived from ore-bearing strata. The metallogenic environment has characteristics of middle-low temperature and supergene The metallogenesis underwent three stages: (1) Sedimentation-diagenesis of the ore-bearing strata led to preliminary concentration of uranium; (2) Polytectonic activities accompanied by underground hydrothermal process resulted in the industrial concentration of uranium; and (3) Orebody reworked by oxidation-denudation and leaching, locally has taken place secondary concentration. The deposit in origin attributes to polygenesis dominated by underground hydrothermal metallogenesis. Main metallogenic epoch happens during the periods of Late Yanshan and Himalayan. According to the geological-tectonic conditions the further prospecting direction in study area is proposed. (3 refs., 5 figs., 9 tabs.)

  17. Physiological Responses of Some Iranian Grape Cultivars to Iron Chelate Application in Calcareous Soil

    Directory of Open Access Journals (Sweden)

    H. Doulati Baneh

    2016-07-01

    Full Text Available Introduction: Iron chlorosis is considered to be one of the most important nutritional disorders in grapevines, particularly in calcareous soils that under these conditions fruit yield and quality is depressed in the current year and fruit buds poorly develop for following year. Symptoms of iron chlorosis in orchards and vineyards are usually more frequent in spring when shoot growth is rapid and bicarbonate concentration in the soil solution buffers soil pH in the rhizosphere and root apoplast. Several native grapevine (Vitis vinifera L. genotypes, highly appreciated for their organoleptic characteristics and commercial potential, are widely cultivated in Iran. Cultivated plants differ as to their susceptibility to Fe deficiency in calcareous soils, some being poorly affected while others showing severe leaf chlorotic symptoms. Selection and the use of Fe-efficient genotypes is one of the important approaches to prevent this nutritional problem. In this research the response of three local grapevine cultivars was evaluated to iron chelate consumption in a calcareous soil (26% T.N.V. Materials and Methods: Well rooted woody cuttings of three autochthonous varieties (Rasha, Qezel uzum, Keshmeshi Qermez were cultivated in pots filled with a calcareous soil with iron chelate consumption at three rates (0, 7.5 and 15 mg Fe/ Kg soil. The study was conducted with two factors (cultivar and iron chelate and 3 replicates in a factorial arrangement based on randomized complete block design. Plant parameters including vegetative growth, chlorophyll index and leaf area were monitored during the growth period. At the end of the treatment, fresh and dry weight of shoots and roots were determined. The concentrations of macro and micro elements in the leaves were assayed using an atomic absorption and spectrophotometer. One-way-ANOVA was applied comparing the behavior of the cultivars growing. Results and Discussion: Analysis of variance showed that chlorophyll

  18. Ozone pollution affects flower numbers and timing in a simulated BAP priority calcareous grassland community

    International Nuclear Information System (INIS)

    Hayes, Felicity; Williamson, Jennifer; Mills, Gina

    2012-01-01

    Mesocosms representing the BAP Priority habitat ‘Calcareous Grassland’ were exposed to eight ozone profiles for twelve-weeks in two consecutive years. Half of the mesocosms received a reduced watering regime during the exposure periods. Numbers and timing of flowering in the second exposure period were related to ozone concentration and phytotoxic ozone dose (accumulated stomatal flux). For Lotus corniculatus, ozone accelerated the timing of the maximum number of flowers. An increase in mean ozone concentration from 30 ppb to 70 ppb corresponded with an advance in the timing of maximum flowering by six days. A significant reduction in flower numbers with increasing ozone was found for Campanula rotundifolia and Scabiosa columbaria and the relationship with ozone was stronger for those that were well-watered than for those with reduced watering. These changes in flowering timing and numbers could have large ecological impacts, affecting plant pollination and the food supply of nectar feeding insects. - Highlights: ► An increase in ozone accelerated timing of maximum flowering in Lotus corniculatus. ► Ozone reduced flower numbers in Campanula rotundifolia and Scabiosa columbaria. ► Reduced water availability did not protect most species from the effects of ozone. - Increased tropospheric ozone affected timing of flowering and maximum flower numbers in calcareous grassland mesocosms.

  19. Phosphorus reduces the zinc concentration in cereals pot-grown on calcareous Vertisols from southern Spain.

    Science.gov (United States)

    Sánchez-Rodríguez, Antonio Rafael; Del Campillo, María Carmen; Torrent, José

    2017-08-01

    Zinc deficiency, a major problem in crops grown on soils low in available Zn, is even more important in phosphorus-rich soils. This work aimed to elucidate the effects of soil P and Zn levels, and of fertilizer application, on yield and Zn concentration in cereal grains. Wheat and barley were successively pot-grown on 20 calcareous Vertisols low in available Zn and ranging widely in available P. Grain yield in the plants grown on the native soils was positively correlated with Olsen P but not with diethylenetriaminepentaacetic acid (DTPA)-extractable Zn except for wheat on P-rich soils. Grain Zn concentration was negatively correlated with Olsen P. Grain Zn uptake differed little among soils. Application of P to the soils increased grain yield insignificantly and P concentration significantly; however, it reduced grain Zn concentration (particularly at low Olsen P values). Applying Zn alone only increased grain Zn concentration, whereas applying P and Zn in combination increased yield and grain Zn concentration at low and high Olsen P values, respectively. Applying P alone to plants grown on calcareous Vertisols low in available P and Zn may in practice reduce grain Zn concentrations while not increasing grain yield significantly. © 2016 Society of Chemical Industry. © 2016 Society of Chemical Industry.

  20. Dried gamma-irradiated sewage solids use on calcareous soils: crop yeilds and heavy metals uptake

    Energy Technology Data Exchange (ETDEWEB)

    McCaslin, B.D.; Sivinski, J.S.

    1979-01-01

    Experiments designed to examine gamma-radiation effects on extractable and plant-available sludge elements and to examine the response of crops to sludge applications on two typical, calcareous soils in New Mexico are summarized. Information has been given indicating that the radiation process of reducing pathogens in sewage products being developed by Sandia Laboratories, does not significantly increase the chemical extractability and plant uptake of a broad range of nutrients and heavy metals. However, radiation treatment greatly facilitates handling sewage for experimentation, because pathogen contamination precautions are eliminated and weed seeds killed. Studies on the effects of sludge irradiation on plant nutrient uptake revealed no concentration increases, agreeing with results presented herein. Sewage products may have special potential for use on calcareous soils, such as in New Mexico. For instance, in New Mexico the lack of potassium in sewage products is not a problem and the naturally high pH of New Mexico soil greatly reduces plant availability of many problem heavy metals. Dramatic increases in yield are typified by the greenhouse and field results presented herein, especially for the known micronutrient deficient soils of New Mexico. Results indicate that sewage sludge is an excellent Zn and Fe fertilizer. More research needs to be done before the economics of sludge application can be calculated and more field information is needed before irradiated sewage products are used indiscriminately. (ERB)

  1. Centrifuge-operated specimen staining method and apparatus

    Science.gov (United States)

    Clarke, Mark S. F. (Inventor); Feeback, Daniel L. (Inventor)

    1999-01-01

    A method of staining preselected, mounted specimens of either biological or nonbiological material enclosed within a staining chamber where the liquid staining reagents are applied and removed from the staining chamber using hypergravity as the propelling force. In the preferred embodiment, a spacecraft-operated centrifuge and method of diagnosing biological specimens while in orbit, characterized by hermetically sealing a shell assembly. The assembly contains slide stain apparatus with computer control therefor, the operative effect of which is to overcome microgravity, for example on board an International Space Station.

  2. EFFECT OF SILICATE ON GRAM STAINING AND VIABILITY OF PNEUMOCOCCI AND OTHER BACTERIA

    Science.gov (United States)

    MacLeod, Colin M.; Roe, Amy S.

    1956-01-01

    Application of silicate solutions to living or heat-killed pneumococci and to certain "viridans" streptococci causes their conversion from a Gram-positive to a Gram-negative state. The original staining properties can be restored by suspending the silicate-treated bacteria in alkaline solutions of various salts but not by simple washing in water. Living pneumococci and the strains of streptococci whose staining properties are similarly affected are killed when suspended in silicate solutions. In other Gram-positive species silicate causes conversion to Gram negativity but restoration to positivity occurs upon washing in water. In a third group of Gram-positive organisms silicate has no effect on the Gram reaction. The viability of organisms in these two groups is unaffected by silicate under the conditions employed. No effect on staining or viability of Gram-negative bacteria has been observed. The effects of silicate on staining and viability are inhibited by nutrient broth or whole serum but not by purified serum albumin. Lecithin, choline, and other substituted ammonium compounds also inhibit the effects of silicate on pneumococci. PMID:13306854

  3. Hirschsprung's disease diagnosis: Comparison of immunohistochemical, hematoxilin and eosin staining

    Science.gov (United States)

    Memarzadeh, Mehrdad; Talebi, Ardeshir; Edalaty, Masod; Hosseinpour, Mehrdad; Vahidi, Nasrin

    2009-01-01

    Background: The diagnosis of Hirschsprung's disease (HD) is based on the absence of ganglion cells. In hemotoxilin and eosin (H and E) as well as acetylcholine esterase staining there are limitations in the diagnosis of immature ganglion cells in neonates. Methods: In this prospective study, 54 biopsies taken from suspected HD patients (five mucosal specimens and 49 full thickness specimens) were studied. In the laboratory, after preparing sections of paraffin embedded tissues, H and E staining slides were compared with immunohistochemical (IHC) staining including: S100, NSE, CD117, CD56, Cathepsin D, Vimentin, BCL2, GFAP, Synaptophysin and chromogranin. Results: The study revealed 30 negative (absence of ganglion cells) cases (55.5%), 17 positive cases (31.04%) and seven suspected cases (12.9%) of ganglion cells on the H and E staining. On IHC staining with CD56 and Cathepsin D, all of the 17 positive cases detected through H and E, were confirmed for having ganglion cells and out of 30 cases reported negative on H and E staining, 28(93.3%) were reported negative and two (6.7%) positive by IHC staining. Of the seven suspected cases H and E staining), IHC staining detectedganglion cells only in five slides; two remained negative. Conclusions: IHC staining using CD56 and Cathepsin D improved the accuracy of diagnosis in HD when used in addition to H and E staining technique, especially for negative or suspicious slides. PMID:20671847

  4. Electrostatic control of the coffee stain effect

    Science.gov (United States)

    Wray, Alex; Papageorgiou, Demetrios; Sefiane, Khellil; Matar, Omar

    2013-11-01

    The ``coffee stain effect,'' as first explained by Deegan et al. 1997, has received a great deal of attention amongst modellers and experimentalists in recent years, perhaps due in part to its obvious casual familiarity. However, it maintains interest because of its intriguing reliance on an interplay of a trio of effects: contact line pinning, inhomogeneous mass flux, and resulting capillarity-driven flow. What is more, the effect, and especially its suppression or reversal, find applications in fields as diverse as sample recovery, mass spectroscopy and the printing of Organic LEDs. We examine the motion a nanoparticle-laden droplet deposited on a precursor film, incorporating the effects of capillarity, concentration-dependent rheology, together with a heated substrate and resultant mass flux and Marangoni effects. We allow the substrate to act as an electrode and incorporate a second electrode above the droplet. The potential difference together with a disparity in electrical properties between the two regions results in electrical (Maxwell) stresses at the interface. We show via lubrication theory and via direct numerical simulations that the ring effect typically observed may be suppressed or augmented via appropriate use of electric fields. EPSRC DTG

  5. Erbium doped stain etched porous silicon

    International Nuclear Information System (INIS)

    Gonzalez-Diaz, B.; Diaz-Herrera, B.; Guerrero-Lemus, R.; Mendez-Ramos, J.; Rodriguez, V.D.; Hernandez-Rodriguez, C.; Martinez-Duart, J.M.

    2008-01-01

    In this work a simple erbium doping process applied to stain etched porous silicon layers (PSLs) is proposed. This doping process has been developed for application in porous silicon solar cells, where conventional erbium doping processes are not affordable because of the high processing cost and technical difficulties. The PSLs were formed by immersion in a HF/HNO 3 solution to properly adjust the porosity and pore thickness to an optimal doping of the porous structure. After the formation of the porous structure, the PSLs were analyzed by means of nitrogen BET (Brunauer, Emmett and Teller) area measurements and scanning electron microscopy. Subsequently, the PSLs were immersed in a saturated erbium nitrate solution in order to cover the porous surface. Then, the samples were subjected to a thermal process to activate the Er 3+ ions. Different temperatures and annealing times were used in this process. The photoluminescence of the PSLs was evaluated before and after the doping processes and the composition was analyzed by Fourier transform IR spectroscopy

  6. Miocene oceanographic changes of the western equatorial Atlantic (Ceara Rise) based on calcareous dinoflagellate cysts

    Science.gov (United States)

    Heinrich, S.; Zonneveld, K. A. F.; Willems, H.

    2010-09-01

    The middle- and upper Miocene represent a time-interval of major changes in palaeoceanography that favoured the cooling of the climate and culminated in the Northern Hemisphere Glaciation (NHG). The basis for the development of the modern deepwater circulation pattern, e.g. thermohaline circulation, was hereby established. Tectonic events played a key role in the progressing Miocene oceanography, such as the narrowing of the Panama gateway (e.g. Duque-Caro 1990) and the possible linked changes in North Atlantic Deep Water formation (Lear et al. 2003). However, the complex interaction between the closing of the Panama Gateway, the development of NADW, and thus the oceanographic progression towards our present day circulation is far from being fully understood. We want to improve the understanding of these processes by establishing a detailed palaeoceanographic reconstruction of the western equatorial Atlantic Ocean on the basis of calcareous dinoflagellate cyst (dinocyst) associations. Within this study, we investigated sediment samples from ODP Site 926A by defining the calcareous dinocyst assemblage. Site 926A is located at the southwestern flank of the Ceara Rise, an area of highest sensitivity to global deep water circulation changes. At about 12 Ma, when NADW production increased (e.g. Wright et al. 1992), we see a distinct increase in the absolute abundances of the calcareous dinocysts. This might be related to enhanced productivity or to better carbonate preservation. At 11.3 Ma, Leonella granifera, a species known to be strongly related to terrestrial input occurs. This could be a signal for the initiation of the Amazon River as a transcontinental river with the development of the Amazon fan (11.8 - 11.3 Ma; Figueiredo et al. 2009) in relation to Andean tectonism. References: Duque-Caro, H. (1990): Neogene stratigraphy, paleoceanography and palebiology in Northwest South America and the evolution of the Panama Seaway. Palaeogeography, Palaeoclimatology

  7. Biochar and manure affect calcareous soil and corn silage nutrient concentrations and uptake.

    Science.gov (United States)

    Lentz, R D; Ippolito, J A

    2012-01-01

    Carbon-rich biochar derived from the pyrolysis of biomass can sequester atmospheric CO, mitigate climate change, and potentially increase crop productivity. However, research is needed to confirm the suitability and sustainability of biochar application to different soils. To an irrigated calcareous soil, we applied stockpiled dairy manure (42 Mg ha dry wt) and hardwood-derived biochar (22.4 Mg ha), singly and in combination with manure, along with a control, yielding four treatments. Nitrogen fertilizer was applied when needed (based on preseason soil test N and crop requirements) in all plots and years, with N mineralized from added manure included in this determination. Available soil nutrients (NH-N; NO-N; Olsen P; and diethylenetriaminepentaacetic acid-extractable K, Mg, Na, Cu, Mn, Zn, and Fe), total C (TC), total N (TN), total organic C (TOC), and pH were evaluated annually, and silage corn nutrient concentration, yield, and uptake were measured over two growing seasons. Biochar treatment resulted in a 1.5-fold increase in available soil Mn and a 1.4-fold increase in TC and TOC, whereas manure produced a 1.2- to 1.7-fold increase in available nutrients (except Fe), compared with controls. In 2009 biochar increased corn silage B concentration but produced no yield increase; in 2010 biochar decreased corn silage TN (33%), S (7%) concentrations, and yield (36%) relative to controls. Manure produced a 1.3-fold increase in corn silage Cu, Mn, S, Mg, K, and TN concentrations and yield compared with the control in 2010. The combined biochar-manure effects were not synergistic except in the case of available soil Mn. In these calcareous soils, biochar did not alter pH or availability of P and cations, as is typically observed for acidic soils. If the second year results are representative, they suggest that biochar applications to calcareous soils may lead to reduced N availability, requiring additional soil N inputs to maintain yield targets. Copyright © by the

  8. Fate of Zinc Oxide Nanoparticles Coated onto Macronutrient Fertilizers in an Alkaline Calcareous Soil

    Science.gov (United States)

    Milani, Narges; Hettiarachchi, Ganga M.; Kirby, Jason K.; Beak, Douglas G.; Stacey, Samuel P.; McLaughlin, Mike J.

    2015-01-01

    Zinc oxide (ZnO) nanoparticles may provide a more soluble and plant available source of Zn in Zn fertilizers due to their greater reactivity compared to equivalent micron- or millimetre-sized (bulk) particles. However, the effect of soil on solubility, spatial distribution and speciation of ZnO nanoparticles has not yet been investigated. In this study, we examined the diffusion and solid phase speciation of Zn in an alkaline calcareous soil following application of nanoparticulate and bulk ZnO coated fertilizer products (monoammonium phosphate (MAP) and urea) using laboratory-based x-ray techniques and synchrotron-based μ-x-ray fluorescence (μ–XRF) mapping and absorption fine structure spectroscopy (μ–XAFS). Mapping of the soil-fertilizer reaction zones revealed that most of the applied Zn for all treatments remained on the coated fertilizer granule or close to the point of application after five weeks of incubation in soil. Zinc precipitated mainly as scholzite (CaZn2(PO4)2.2H2O) and zinc ammonium phosphate (Zn(NH4)PO4) species at the surface of MAP granules. These reactions reduced dissolution and diffusion of Zn from the MAP granules. Although Zn remained as zincite (ZnO) at the surface of urea granules, limited diffusion of Zn from ZnO-coated urea granules was also observed for both bulk and nanoparticulate ZnO treatments. This might be due to either the high pH of urea granules, which reduced solubility of Zn, or aggregation (due to high ionic strength) of released ZnO nanoparticles around the granule/point of application. The relative proportion of Zn(OH)2 and ZnCO3 species increased for all Zn treatments with increasing distance from coated MAP and urea granules in the calcareous soil. When coated on macronutrient fertilizers, Zn from ZnO nanoparticles (without surface modifiers) was not more mobile or diffusible compared to bulk forms of ZnO. The results also suggest that risk associated with the presence of ZnO NPs in calcareous soils would be the

  9. Determination of Complement-Mediated Killing of Bacteria by Viability Staining and Bioluminescence

    OpenAIRE

    Virta, Marko; Lineri, Sanna; Kankaanpää, Pasi; Karp, Matti; Peltonen, Karita; Nuutila, Jari; Lilius, Esa-Matti

    1998-01-01

    Complement-mediated killing of bacteria was monitored by flow cytometric, luminometric, and conventional plate counting methods. A flow cytometric determination of bacterial viability was carried out by using dual staining with a LIVE/DEAD BacLight bacterial viability kit. In addition to the viable cell population, several other populations emerged in the fluorescence histogram, and there was a dramatic decrease in the total cell count in the light-scattering histogram in the course of the co...

  10. Influence of Blended Cements with Calcareous Fly Ash on Chloride Ion Migration and Carbonation Resistance of Concrete for Durable Structures.

    Science.gov (United States)

    Glinicki, Michał A; Jóźwiak-Niedźwiedzka, Daria; Gibas, Karolina; Dąbrowski, Mariusz

    2016-01-02

    The objective of this paper is to examine the possible use of new blended cements containing calcareous fly ash in structural concrete, potentially adequate for structural elements of nuclear power plants. The investigation included five new cements made with different contents of non-clinker constituents: calcareous fly ash, siliceous fly ash, ground granulated blastfurnace slag, and a reference cement-ordinary Portland cement. The influence of innovative cements on the resistance of concrete to chloride and carbonation exposure was studied. Additionally, an evaluation of the microstructure was performed using optical microscopy on concrete thin sections. Test results revealed a substantial improvement of the resistance to chloride ion penetration into concrete containing blended cements. The resistance was higher for increased clinker replacement levels and increased with curing time. However, concrete made with blended cements exhibited higher depth of carbonation than the Portland cement concrete, except the Portland-fly ash cement with 14.3% of calcareous fly ash. The thin sections analysis confirmed the values of the carbonation depth obtained from the phenolphthalein test. Test results indicate the possible range of application for new cements containing calcareous fly ash.

  11. Influence of Blended Cements with Calcareous Fly Ash on Chloride Ion Migration and Carbonation Resistance of Concrete for Durable Structures

    Directory of Open Access Journals (Sweden)

    Michał A. Glinicki

    2016-01-01

    Full Text Available The objective of this paper is to examine the possible use of new blended cements containing calcareous fly ash in structural concrete, potentially adequate for structural elements of nuclear power plants. The investigation included five new cements made with different contents of non-clinker constituents: calcareous fly ash, siliceous fly ash, ground granulated blastfurnace slag, and a reference cement—ordinary Portland cement. The influence of innovative cements on the resistance of concrete to chloride and carbonation exposure was studied. Additionally, an evaluation of the microstructure was performed using optical microscopy on concrete thin sections. Test results revealed a substantial improvement of the resistance to chloride ion penetration into concrete containing blended cements. The resistance was higher for increased clinker replacement levels and increased with curing time. However, concrete made with blended cements exhibited higher depth of carbonation than the Portland cement concrete, except the Portland-fly ash cement with 14.3% of calcareous fly ash. The thin sections analysis confirmed the values of the carbonation depth obtained from the phenolphthalein test. Test results indicate the possible range of application for new cements containing calcareous fly ash.

  12. Zanclean/Piacenzian transition on Cyprus (SE Mediterranean): calcareous nannofossil and Sea Surface Temperatures evidence of sapropel formation

    Science.gov (United States)

    Athanasiou, Maria; Triantaphyllou, Maria; Bouloubassi, Ioanna; Dimiza, Margarita; Gogou, Alexandra; Klein, Vincent; Parinos, Constantine; Theodoroyu, George

    2016-04-01

    Quantitative analyses of calcareous nannofossils in the sediments of Pissouri South section on the island of Cyprus have produced a paleoceanographic record reflecting the paleoclimatic conditions during Zanclean/Piacenzian transition. According to the performed calcareous nannofossil biostratigraphy the studied section is correlated with MNN14/15 and MNN16 calcareous nannofossil biozones and is astronomically dated between 4.065 and 3.217 Ma. Intervals of increased organic carbon content along with the positive values of Florisphaera profunda, Helicosphaera sellii, Discoaster spp. and the subsequent increase of stratification S-index correspond to the sapropel deposition during periods of wetter climate and intense continental runoff especially from the river Nile. These layers are alternating with grey marly intervals, featured by the increased values of small placoliths of Reticulofenestra and Gephyrocapsa species, which are indicative of eutrophic conditions during intense surface waters mixing. Pissouri South section comprises a SSTs sequence using alkenone unsaturation index (Uk 37) providing with the first continuous record from SE Mediterranean covering the Zanclean/Piacenzian (Pliocene) transition (~ 4.1-3.2 Ma). Correlation of the total alkenone concentration to the calcareous nannofossil assemblage and especially representatives among Noelaerhabdaceae family revealed that Pseudoemiliania lacunosa probably had similar temperature sensitivity to that of Emiliania huxleyi, currently producing alkenones in present day oceans.Our data support the prevalence of a generally warm phase characterized by the absence of high-frequency climate variations in the southeastern Mediterranean during the Zanclean/Piacenzian (Early/Late Pliocene) transition.

  13. Nitrogen deposition and grass encroachment in calcareous and acidic Grey dunes (H2130) in NW-Europe

    NARCIS (Netherlands)

    Kooijman, A.M.; van Til, M.; Noordijk, E.; Remke, E.; Kalbitz, K.

    We present an overview of high nitrogen deposition effects on coastal dune grasslands in NW-Europe (H2130), especially concerning grass encroachment in calcareous and acidic Grey Dunes. The problem is larger than previously assumed, because critical loads are still too high, and extra N-input from

  14. Impacts of long-term nitrogen fertilization on acid buffering rates and mechanisms of a slightly calcareous clay soil

    NARCIS (Netherlands)

    Zhang, Yuting; Vries, de Wim; Thomas, Ben W.; Hao, Xiying; Shi, Xiaojun

    2017-01-01

    Acidification of cropland soils is a serious problem in China that may cause long term pH decline, which threatens the sustainability of soil fertility and crop yields. The objective of this research was to investigate those rates and mechanisms for a slightly calcareous soil. The field data were

  15. Iron biofortification of wheat grains through integrated use of organic and chemical fertilizers in pH affected calcareous soil.

    Science.gov (United States)

    Ramzani, Pia Muhammad Adnan; Khalid, Muhammad; Naveed, Muhammad; Ahmad, Rashid; Shahid, Muhammad

    2016-07-01

    Incidence of iron (Fe) deficiency in human populations is an emerging global challenge. This study was conducted to evaluate the potential of iron sulphate combined with biochar and poultry manure for Fe biofortification of wheat grains in pH affected calcareous soil. In first two incubation studies, rates of sulfur (S) and Fe combined with various organic amendments for lowering pH and Fe availability in calcareous soil were optimized. In pot experiment, best rate of Fe along with biochar (BC) and poultry manure (PM) was evaluated for Fe biofortification of wheat in normal and S treated low pH calcareous soil. Fe applied with BC provided fair increase in root-shoot biomass and photosynthesis up to 79, 53 and 67%, respectively in S treated low pH soil than control. Grain Fe and ferritin concentration was increased up to 1.4 and 1.2 fold, respectively while phytate and polyphenol was decreased 35 and 44%, respectively than control in treatment where Fe was applied with BC and S. In conclusion, combined use of Fe and BC could be an effective approach to improve growth and grain Fe biofortification of wheat in pH affected calcareous soil. Copyright © 2016 Elsevier Masson SAS. All rights reserved.

  16. Ocean Acidification: Investigation and Presentation of the Effects of Elevated Carbon Dioxide Levels on Seawater Chemistry and Calcareous Organisms

    Science.gov (United States)

    Buth, Jeffrey M.

    2016-01-01

    Ocean acidification refers to the process by which seawater absorbs carbon dioxide from the atmosphere, producing aqueous carbonic acid. Acidic conditions increase the solubility of calcium carbonate, threatening corals and other calcareous organisms that depend on it for protective structures. The global nature of ocean acidification and the…

  17. Intrapartum transcervical amnioinfusion for meconium-stained amniotic fluid.

    Science.gov (United States)

    Das, A K; Jana, N; Dasgupta, S; Samanta, B

    2007-06-01

    To assess the rates of cesarean deliveries and perinatal outcome following intrapartum transcervical amnioinfusion in women with meconium-stained amniotic fluid (MSAF) in a setting with no electronic fetal monitoring or specialized neonatal care. In this prospective comparative study with 150 women who were in labor and had MSAF, 50 of the women received a transcervical amnioinfusion and the remaining 100 women received standard care. The inclusion criteria were a pregnancy of at least 37 weeks' duration, a single live fetus in cephalic presentation, no major medical or obstetric complications, and no known fetal malformation. The amnioinfusion was performed with 1000 mL of normal saline solution through a red rubber catheter. Amnioinfusion was associated with a significant decrease in the incidence of low Apgar score (amnioinfusion than in the control group (24% vs. 48%; RR, 0.5; 95% CI, 0.29-0.85). There were no major complications related to amnioinfusion. Intrapartum amnioinfusion for MSAF is a simple, safe, effective, and inexpensive procedure feasible in settings where intrapartum monitoring is limited. It is associated with improved perinatal outcome and could lower cesarean delivery rates in low-resource countries.

  18. SPRINGS WITH CALCAREOUS TUFA IN THE VALLEY OF THE JAMNE CREEK IN GORCE

    Directory of Open Access Journals (Sweden)

    Roksana Krause

    2015-01-01

    Full Text Available The study gives a detail characteristic of a hard water springs habitat with the communities of Cratoneurion commutati (habitat code of Nature 2000: 7220, localized within Nature 2000 protected area Ostoja Gorczańska PLH120018, in an upper part of the valley of Jamne creek. The plants are described along with the main habitat parameters, namely: altitude, exposition, slope gradient, insolation, type of bedrock, water flow regime and the spring outflow efficiency. The temperature, pH, electrical conductivity were measured in the field, the concentrations of Ca and Mg in spring water were measured by Atomic Absorption Spectroscopy (AAS. The investigated headwater areas are small (0.7–80 m2 and highly differentiated by the intensity of calcareous tufa precipitation and the degree of plant cover development.

  19. Validation of water sorption-based clay prediction models for calcareous soils

    DEFF Research Database (Denmark)

    Arthur, Emmanuel; Razzaghi, Fatemeh; Moosavi, Ali

    2017-01-01

    on prediction accuracy. The soils had clay content ranging from 9 to 61% and CaCO3 from 24 to 97%. The three water sorption models considered showed a reasonably fair prediction of the clay content from water sorption at 28% relative humidity (RMSE and ME values ranging from 10.6 to 12.1 and −8.1 to −4......Soil particle size distribution (PSD), particularly the active clay fraction, mediates soil engineering, agronomic and environmental functions. The tedious and costly nature of traditional methods of determining PSD prompted the development of water sorption-based models for determining the clay...... fraction. The applicability of such models to semi-arid soils with significant amounts of calcium carbonate and/or gypsum is unknown. The objective of this study was to validate three water sorption-based clay prediction models for 30 calcareous soils from Iran and identify the effect of CaCO3...

  20. Transformation of nitrogenous fertilizers of surface and deep application in calcareous soil

    International Nuclear Information System (INIS)

    Zuo Dongfeng

    1990-01-01

    The transformations of 15 N labelled fertilizer N in calcareous soil were studied under greennhouse conditions. The experimental results indicate that the ratio of fixed ammonium is closely related to the methods of fertilizer application to the soil. When fertilizer N applied as deep dressing the fixation of nitrogen by clay minerals and microorganisms may markedly reduce the losses of nitrogen, but the amount of nitrogen fixed by the clay minerals and that by microorganisms showed negative correlation (r = -0.9185 ** ). The more the amount of fixed nitrogen by clay minerals, the less by microorganisms. No obvious interrelation between the residual utilization of urea, ammonium bicarbonate, ammonium sulfate and the ammount of nitrogen fixed by organisms can be observed, but the residual utilization of these fertilizers by the succeeding crop has been related to the total amount of mineral nitrogen

  1. Soil seed-bank composition reveals the land-use history of calcareous grasslands

    Science.gov (United States)

    Karlík, Petr; Poschlod, Peter

    2014-07-01

    We compared soil seed banks and vegetation of recent (established on abandoned arable fields) and ancient (continuously managed as pastures at least since 1830) calcareous grasslands if there is any impact of former arable field use. The study was carried out in two regions of Southern Germany with well-preserved dry grassland vegetation: the western Jurassic mountains (Kaltes Feld) and the climatically drier eastern part of Southern Germany (Kallmünz). Total number of species in the seed bank was similar in both regions, but species composition partly differed, reflecting phytogeographical differences between the regions. The total number of emerged seedlings showed a large disparity (5457 compared to 2523 seedlings/m2 in Kaltes Feld and Kallmünz, respectively). Though there were differences in seed bank composition and size, we found a uniform pattern of plant traits (affiliation to phytosociological groups, Raunkiaer plant life-forms and seed longevity), which depended on the age of the grassland. The main conclusion is that seed banks in contemporary calcareous grasslands still reflect the history of former land use - in this case arable cultivation, even though it occurred a long time ago (up to 150 years). Indicators of former arable fields are germinable seeds of weeds which have persisted in the soil to the present. By contrast, weedy species are completely absent from the seed banks of ancient grasslands. Soil seed banks of recent grasslands may be of substantial conservation importance because they may store seeds of rare and endangered weed species such as Kickxia spuria, Silene noctiflora and Stachys annua, the majority of which have already gone extinct from the current vegetation of the study sites.

  2. Effect of phosphate fertilization on the bioavailability of iron in calcareous soils

    Science.gov (United States)

    Sánchez-Rodríguez, A. R.; del Campillo, M. C.; Barrón, V.; Torrent, J.

    2012-04-01

    Iron (Fe) chlorosis is the most important nutritional problem in sensitive plant species cultivated in calcareous soils, its main symptoms being interveinal yellowing in the younger leaves due to lack of chlorophyll and reduced growth. Fe chlorosis has been related to the content of poorly crystalline Fe oxides in soil. The effect of other nutrients, especially phosphorus (P), is, however, a matter of debate. In this work we examined whether fertilization with P alters the availability of Fe to sensitive plants growing in two different Fe chlorosis-inducing calcareous soils. Phosphate at rates of 0 (control), 25, 50, 100 and 200 mg P kg-1 soil was applied to pots where six-months-old olive trees cv. Arbequina were grown. The experiment lasted three years and took place in a shaded house. Chlorophyll concentration in the young leaves was estimated with the SPAD value (using a Minolta apparatus) three-four times per year. Furthermore, shoot length, dry weight of annual pruning and mineral element concentration were measured at the end of each year. In one of the soils, SPAD and leaf Fe concentration decreased with increasing P dose. However in the other soil, SPAD was not correlated with the rate of applied P. In both soils, potassium and zinc concentrations in plants fertilized with P were lower than those in the control plants. This work was funded by the Spanish Ministry of Science and Innovation, Projects: AGL 2005-06691-C02-01 and AGL 2008-05053-C02-02, and the European Regional Development Funds. ARSR acknowledges the finnancial support from the Spanish Ministry of Education as a fellow of the program "Training of University Teachers" (Formación del Profesorado Universitario, AP2008-04716)

  3. Enhancing the Durability of Calcareous Stone Monuments of Ancient Egypt Using CaCO3 Nanoparticles

    Directory of Open Access Journals (Sweden)

    Mohammad A. Aldoasri

    2017-08-01

    Full Text Available The unwanted changes in valuable historic calcareous stone monuments due to exposure to many physical and chemical effects may lead to its deterioration. The growing interest in the field of conservation of stone monuments encourages the development of consolidation and water-repellent materials. The aim of this study is to evaluate the effectiveness of CaCO3 nanoparticles as a consolidation and protection material for calcareous stone monuments, when those nanoparticles used are dispersed in acrylic copolymer; polyethylmethacrylate (EMA/methylacrylate (MA (70/30, respectively. Samples were subjected to artificial aging by relative humidity/temperature to show the optimum conditions of durability and the effectiveness of the nano-mixture in improving the physical and mechanical properties of the stone material. The synthesis process of CaCO3 nanoparticles/polymer nanocomposite has been prepared by in situ emulsion polymerization system. The prepared nanocomposites with 0.15 g CaCO3 nanoparticles showed obvious transparency features and represent nanocomposites coating technology with hydrophobic, consolidating and good protection properties. Some tests were performed in order to estimate the superficial consolidating and protective effect of the treatment. The obtained nanocomposites have been characterized by TEM, while the surface morphology before and after treatment and homogeneous distribution of used consolidation materials on stone surface were examined by SEM. Improvement of stone mechanical properties was evaluated by compressive strength tests. Change in water-interaction properties was evaluated by water absorption capillarity measurements, and colorimetric measurements were used to evaluate the optical appearance. Taken together, the results indicate that CaCO3/polymer nanocomposite is a completely compatible, efficient material for the consolidation of artistic and architectural limestone monuments capable of enhancing the

  4. Adsorption of enrofloxacin in presence of Zn(II) on a calcareous soil.

    Science.gov (United States)

    Graouer-Bacart, Mareen; Sayen, Stéphanie; Guillon, Emmanuel

    2015-12-01

    As a result of their consumption, excretion, disposal and persistence, antibiotics enter the soil environment and may be transported to surface and ground waters. During their transfer through soils, retention processes play a key role in their mobility. Antibiotics often coexist with heavy metals in soils due to agricultural practices and other sources of inputs. In this context, this study deals with the co-adsorption of Zn(II) and enrofloxacin (ENR), a widely-used veterinary antibiotic, on a calcareous soil using batch retention experiments and X-ray Absorption Near Edge Structure (XANES) spectroscopy. To improve our understanding of the interaction of this emerging organic contaminant with metal cations at the water-soil interface, the ternary system containing ENR, Zn(II) and a selected calcareous soil was investigated over a pH range between 7 and 10, at different solid-solution contact times and ENR concentrations. The presence of Zn(II) slightly influenced the retention of the antibiotic, leading to an increase of the adsorbed ENR amounts. The distribution coefficient Kd value increased from 0.66 Lg(-1) for single ENR adsorption to 1.04 Lg(-1) in presence of Zn(II) at a 1/2 ENR/Zn(II) ratio. The combination of adsorption isotherm data, solution speciation diagrams and XANES spectra evidenced a small proportion of Zn(II)-ENR complexes at soil pH leading to the slight increase of ENR adsorption in presence of zinc. These results suggest that it is necessary to consider the interaction between ENR and metal cations when assessing the mobility of ENR in soils. Copyright © 2015 Elsevier Inc. All rights reserved.

  5. Spatial and seasonal reef calcification in corals and calcareous crusts in the central Red Sea

    KAUST Repository

    Roik, Anna Krystyna; Roder, Cornelia; Rö thig, Till; Voolstra, Christian R.

    2015-01-01

    The existence of coral reef ecosystems critically relies on the reef carbonate framework produced by scleractinian corals and calcareous crusts (i.e., crustose coralline algae). While the Red Sea harbors one of the longest connected reef systems in the world, detailed calcification data are only available from the northernmost part. To fill this knowledge gap, we measured in situ calcification rates of primary and secondary reef builders in the central Red Sea. We collected data on the major habitat-forming coral genera Porites, Acropora, and Pocillopora and also on calcareous crusts (CC) in a spatio-seasonal framework. The scope of the study comprised sheltered and exposed sites of three reefs along a cross-shelf gradient and over four seasons of the year. Calcification of all coral genera was consistent across the shelf and highest in spring. In addition, Pocillopora showed increased calcification at exposed reef sites. In contrast, CC calcification increased from nearshore, sheltered to offshore, exposed reef sites, but also varied over seasons. Comparing our data to other reef locations, calcification in the Red Sea was in the range of data collected from reefs in the Caribbean and Indo-Pacific; however, Acropora calcification estimates were at the lower end of worldwide rates. Our study shows that the increasing coral cover from nearshore to offshore environments aligned with CC calcification but not coral calcification, highlighting the potentially important role of CC in structuring reef cover and habitats. While coral calcification maxima have been typically observed during summer in many reef locations worldwide, calcification maxima during spring in the central Red Sea indicate that summer temperatures exceed the optima of reef calcifiers in this region. This study provides a foundation for comparative efforts and sets a baseline to quantify impact of future environmental change in the central Red Sea.

  6. Spatial and seasonal reef calcification in corals and calcareous crusts in the central Red Sea

    KAUST Repository

    Roik, Anna Krystyna

    2015-12-14

    The existence of coral reef ecosystems critically relies on the reef carbonate framework produced by scleractinian corals and calcareous crusts (i.e., crustose coralline algae). While the Red Sea harbors one of the longest connected reef systems in the world, detailed calcification data are only available from the northernmost part. To fill this knowledge gap, we measured in situ calcification rates of primary and secondary reef builders in the central Red Sea. We collected data on the major habitat-forming coral genera Porites, Acropora, and Pocillopora and also on calcareous crusts (CC) in a spatio-seasonal framework. The scope of the study comprised sheltered and exposed sites of three reefs along a cross-shelf gradient and over four seasons of the year. Calcification of all coral genera was consistent across the shelf and highest in spring. In addition, Pocillopora showed increased calcification at exposed reef sites. In contrast, CC calcification increased from nearshore, sheltered to offshore, exposed reef sites, but also varied over seasons. Comparing our data to other reef locations, calcification in the Red Sea was in the range of data collected from reefs in the Caribbean and Indo-Pacific; however, Acropora calcification estimates were at the lower end of worldwide rates. Our study shows that the increasing coral cover from nearshore to offshore environments aligned with CC calcification but not coral calcification, highlighting the potentially important role of CC in structuring reef cover and habitats. While coral calcification maxima have been typically observed during summer in many reef locations worldwide, calcification maxima during spring in the central Red Sea indicate that summer temperatures exceed the optima of reef calcifiers in this region. This study provides a foundation for comparative efforts and sets a baseline to quantify impact of future environmental change in the central Red Sea.

  7. Provenance of Holocene calcareous beach-dune sediments, Western Eyre Peninsula, Great Australian Bight, Australia

    Science.gov (United States)

    James, Noel P.; Bone, Yvonne

    2017-07-01

    Much of western Eyre Peninsula adjacent to the Great Australian Bight is veneered with siliceous and calcareous Quaternary aeolian dunes. The lengthy coastline adjacent to this cool-water carbonate factory is a series of Precambrian crystalline bedrock-Pleistocene aeolianite headlands that separate many long, sweeping, Holocene carbonate sand beaches and their backbeach dunes. Incessant SW waves, rolling swells, and onshore winds have resulted in > 350 km of semi-continuous calcareous strandline aeolian sands. The sediment is composed of quartz grains, Cenozoic limestone clasts, and relict particles (extraclasts) but the deposits are overwhelmingly dominated by contemporaneous biofragments from offshore. These skeletal grains are, in order of relative abundance, molluscs > benthic foraminifers > coralline algae > bryozoans, and echinoids. Benthic foraminifers are mostly small (especially rotaliids and miliolids) but the large relict symbiont-bearing protistMarginopora vertebralis, which grew in the latter stages of MIS 2, is present locally. There are no significant onshore-offshore trends within individual beach-dune complexes. There is, however, a prominent spatial partitioning, with extraclast-rich sediments in the north and biofragment-rich deposits in the south. This areal trend is interpreted to result from more active seafloor carbonate production in the south, an area of conspicuous seasonal nutrient upwelling and profound nektic and benthic biological productivity. The overall system is strikingly similar to Holocene and Pleistocene aeolianites along the inboard margin of the Lacepede Shelf and Bonney Coast some 500 km to the southeast, implying a potential universality to the nature of cool-water carbonate aeolianite deposition. The composition of these cool-water aeolianites is more multifaceted than those formed on warm-water, shallow flat-topped platforms, largely because of the comparatively deep, temperate shelf, the high-energy wave and swell

  8. CALCAREOUS NANNOFOSSIL BIOSTRATIGRAPHY OF UPPER CALLOVIAN-LOWER BERRIASIAN SUCCESSIONS FROM THE SOUTHERN ALPS, NORTH ITALY

    Directory of Open Access Journals (Sweden)

    CRISTINA EMANUELA CASELLATO

    2010-11-01

    Full Text Available Calcareous nannofossil biostratigraphy was investigated in uppermost Callovian-lower Berriasian sections from Southern Alps, previously detected through magnetostratigraphy, in order to achieve an integrated stratigraphic framework valid at low latitudes. Nannofossil investigations were carried out on smear slides and ultra-thin sections, revealing generally scarce to common abundances and poor-moderate preservation of nannofloras. An exhaustive taxonomic revision was performed to unambiguously separate forms which are transitional between two species and better delineate rapidly evolving groups. Four new species have been described: Zeugrhabdotus fluxus, Nannoconus puer, Nannoconus erbae, Hexalithus geometricus. Particular attention was paid to taxonomical aspects of primitive nannoconids, appearing and evolving across the early-late Tithonian transition and the Tithonian/Berriasian boundary intervals; the revision was also verified at DSDP Site 534A from Atlantic Ocean. Fourty-eight nannofossil bioevents were detected and the results help to increase potential stratigraphic resolution in this interval. Thirty-seven nannofossil bioevents in the upper Kimmeridgian-lower Berriasian interval have been directly correlated to magnetostratigraphy (CM22-CM17 revealing a systematically older stratigraphic occurrence of these taxa than previously reported. A revised and partly new Tethyan calcareous nannofossil zonation scheme is here proposed for the uppermost Callovian-lower Berriasian interval. It consists of seven bio-zones and eight subzones based on thirty-one bioevents, thirteen of them related to dissolution resistant taxa assuring highest reproducibility even in sections with high diagenetic overprint. The proposed biostratigraphic scheme gives higher resolution than previous zonations, especially for the Callovian-Kimmeridgian interval, where no biozonation was available for the Tethyan Realm. 

  9. Effect of Sulfur Application on Spinach Phytoremedaiton Process of Cadmium in Contaminated Calcareous Soils

    Directory of Open Access Journals (Sweden)

    Ali Kasraian

    2012-07-01

    Full Text Available Recently, cadmium (Cd concentration has increased in croplands through sewage sludge and phosphorous fertilizers application. On the other hand, some special methods, like phytoremedation, were introduced in order to decrease soil contamination hazard. Calcium carbonate plays an important role in Cd solubility in highly calcareous soils. Sulfurs oxidation, by dissolving Cd carbonate fraction, may improve phytoremediation efficiency. An experiment was conducted to study the effects of S application (equivalent to 0, 2, 4 and 6 Mg S ha-1 on Diethylene Triamine Pentaacetic Acid  (DTPA extractable Cd and also on Cd uptake and extraction by spinach (Spinacea oleracea L. in calcareous soils which were contaminated by 40mg Cd kg-1. To ensure biological S oxidation, all S-treated samples were inoculated by Thiobacillus spp. and incubated for 50 days. The soil pH, EC and soluble sulfate were affected by S application and it clearly showed that S oxidation process was occurred in Cd treated soils. The most significant change for pH and sulfate were observed at 4 Mg S ha-1 and for electrical conductivity (EC of soil it occurred at 6Mg S ha-1. Application of S had no effect on DTPA extractable Cd in soils whereas; its concentration increased 73.55% in average in plant tissue. Plant dry matter decreased significantly (about 63 percent following Cd application. Although the highest rate of S oxidation was observed at 4 and 6 Mg S ha-1 tٰٰٰhe maximum Cd extraction (2.5µg Cd pot-1 was observed at 2 Mg S ha-1 . This may be due to adverse effect of Cd toxicity and increase of soluble salt resulted by S oxidation in higher level of S application.

  10. Efficacy test of a toothpaste in reducing extrinsic dental stain

    Science.gov (United States)

    Agustanti, A.; Ramadhani, S. A.; Adiatman, M.; Rahardjo, A.; Callea, M.; Yavuz, I.; Maharani, D. A.

    2017-08-01

    This clinical trial compared the external dental stain reduction achieved by tested toothpaste versus placebo in adult patients. In this double-blind, parallel, randomised clinical trial, 45 female volunteers with a mean age of 20 years old were included. All study subjects front teeth were topically applicated with Silver Diamine Fluoride (SDF) to create external dental stains. Subjects were randomized into test (n=22) and control (n=23) groups. Toothpastes were used for two days to analyse the effects of removing external stains on the labial surfaces of all anterior teeth. VITA Easyshade Advance 4.0 was used to measure dental extrinsic stains changes. The analysis showed statistically significant efficacy of the tested toothpaste in reducing external dental stain caused by SDF, comparing to the placebo toothpaste, after one and two days of usage. The tested toothpaste was effective in reducing dental stain.

  11. Post-staining electroblotting for efficient and reliable peptide blotting.

    Science.gov (United States)

    Lee, Der-Yen; Chang, Geen-Dong

    2015-01-01

    Post-staining electroblotting has been previously described to transfer Coomassie blue-stained proteins from polyacrylamide gel onto polyvinylidene difluoride (PVDF) membranes. Actually, stained peptides can also be efficiently and reliably transferred. Because of selective staining procedures for peptides and increased retention of stained peptides on the membrane, even peptides with molecular masses less than 2 kDa such as bacitracin and granuliberin R are transferred with satisfactory results. For comparison, post-staining electroblotting is about 16-fold more sensitive than the conventional electroblotting for visualization of insulin on the membrane. Therefore, the peptide blots become practicable and more accessible to further applications, e.g., blot overlay detection or immunoblotting analysis. In addition, the efficiency of peptide transfer is favorable for N-terminal sequence analysis. With this method, peptide blotting can be normalized for further analysis such as blot overlay assay, immunoblotting, and N-terminal sequencing for identification of peptide in crude or partially purified samples.

  12. Gram staining in the diagnosis of acute septic arthritis.

    Science.gov (United States)

    Faraj, A A; Omonbude, O D; Godwin, P

    2002-10-01

    This study aimed at determining the sensitivity and specificity of Gram staining of synovial fluid as a diagnostic tool in acute septic arthritis. A retrospective study was made of 22 patients who had arthroscopic lavage following a provisional diagnosis of acute septic arthritis of the knee joint. Gram stains and cultures of the knee aspirates were compared with the clinical and laboratory parameters, to evaluate their usefulness in diagnosing acute arthritis. All patients who had septic arthritis had pain, swelling and limitation of movement. CRP was elevated in 90% of patients. The incidence of elevated white blood cell count was higher in the group of patients with a positive Gram stain study (60%) as compared to patients with a negative Gram stain study (33%). Gram staining sensitivity was 45%. Its specificity was however 100%. Gram staining is an unreliable tool in early decision making in patients requiring urgent surgical drainage and washout.

  13. Techniques for controlling variability in gram staining of obligate anaerobes.

    Science.gov (United States)

    Johnson, M J; Thatcher, E; Cox, M E

    1995-01-01

    Identification of anaerobes recovered from clinical samples is complicated by the fact that certain gram-positive anaerobes routinely stain gram negative; Peptostreptococcus asaccharolyticus, Eubacterium plautii, Clostridium ramosum, Clostridium symbiosum, and Clostridium clostridiiforme are among the nonconformists with regard to conventional Gram-staining procedures. Accurate Gram staining of American Type Culture Collection strains of these anaerobic bacteria is possible by implementing fixing and staining techniques within a gloveless anaerobic chamber. Under anaerobic conditions, gram-positive staining occurred in all test organisms with "quick" fixing techniques with both absolute methanol and formalin. The results support the hypothesis that, when anaerobic bacteria are exposed to oxygen, a breakdown of the physical integrity of the cell wall occurs, introducing Gram stain variability in gram-positive anaerobes. PMID:7538512

  14. Factors influencing extract of Hibiscus sabdariffa staining of rat testes.

    Science.gov (United States)

    Bassey, R B; Bakare, A A; Peter, A I; Oremosu, A A; Osinubi, A A

    2012-08-01

    Some plant extracts can be used in biology and medicine to reveal or identify cellular components and tissues. We investigated the effects of time and concentration on staining of histological sections of rat testes by an acidified extract of Hibiscus sabdariffa. An ethanolic extract of H. sabdariffa was diluted using 1% acetic acid in 70% ethanol to stain histological sections of testes at concentrations of 0.2, 0.1 and 0.05 g/ml for 5, 10, 15, 30, 45 and 60 min. The sections of testes were stained deep red. The staining efficiency of H. sabdariffa was greater at a high concentration and required less time to achieve optimal staining. H. sabdariffa is a strongly basic dye that can be used for various diagnostic purposes. Staining time and concentration must be considered to achieve optimal results.

  15. A useful single-solution polychrome stain for plant material...Brook Cyte-Chrome I.

    Science.gov (United States)

    Stanley L Krugman; Julia F. Littlefield

    1968-01-01

    Fresh and chemically fixed sectioned plant material can be quickly stained by applying a Brook Cyte Chrome I polychrome stain. Staining time averaged only about 10 minutes. And exact timing of staining and de-staining is not as critical as with most of the commonly used stains. The overall quality is comparable to that of the traditional stains.

  16. The Role of Organic Acids on the Release of Phosphorus and Zinc in a Calcareous Soil

    Directory of Open Access Journals (Sweden)

    Sareh Nezami

    2017-02-01

    Full Text Available Introduction: Phosphorus (P and zinc (Zn fixation by soil minerals and their precipitation is one of the major constraints for crop production in calcareous soils. Recent Studies show that root exudates are effective for the extraction of the large amounts of nutrients in calcareous soils. A part of the root exudations are Low Molecular Weight Organic Acids (LMWOAs. LMWOAs are involved in the nutrients availability and uptake by plants, nutrients detoxification, minerals weathering and microbial proliferation in the soil. At nutrients deficiency conditions citric and oxalic acids are released by plants root in large quantities and increase nutrient solubility like P, Zn, Fe, Mn and Cu in the rhizosphere. These components are the large portion of the carbon source in the soil after exudations are mineralized by microorganisms, quickly. In addition, soil surface sorption can affect their half-life and other behaviors in the soil. In order to study the effect of oxalic and citric organic acids on the extraction of phosphorus and zinc from a calcareous soil, an experiment was conducted. Materials and Methods: Studied soil was calcareous and had P and Zn deficiency. Soil sample was collected from A horizon (0-30 cm of Damavand region. 3 g of dried soil sample was extracted with 30 ml of oxalic and citric acids extraction solutions at different concentrations (0.1, 1 and 10 mM and different time periods (10, 60, 180 and 360 minutes on an orbital shaker at 200 rev min-1.The soil extracts then centrifuged for 10 minutes (16000g. After filtering, the pH of the extractions was recorded and then phosphorus, calcium and zinc amounts were determined. Soil extraction with distilled water was used as control. Each treatment was performed in 3 replications. Statistical analysis was performed with ANOVA test followed by the Bonferroni method significant level adjustments due to multiple comparisons. Results and Discussion: The results of variance analysis showed

  17. Effect of three Electron Shuttles on Bioreduction of Ferric Iron in two Acidic and Calcareous soils

    Directory of Open Access Journals (Sweden)

    Setareh Sharifi

    2017-01-01

    Full Text Available Introduction: Iron cycle is one of the most important biogeochemical processes which affect the availability of iron in soils. Ferric iron oxides are the most abundant forms of iron in soils and sediments. Ferric iron is highly insoluble at circumneutral pH. Present investigations have shown that the structural ferric iron bound in clay minerals is reduced by some microorganisms. Anaerobic bacteria reduce ferric iron which bound to soil clay minerals under anaerobic conditions. They have the ability to use ferric iron as a terminal electron acceptor. Many studies presented that dissimilatory iron reducing bacteria (DIRB mediate the transfer of electrons from small organic molecules like acetate and glucose to various humic materials (electron shuttles which then pass electrons abiotically to ferric iron oxyhydroxide and phyllosilicate minerals. Electron shuttles like AQDS, a tricyclic quinone, increase the rate of iron reduction by iron reducing bacteria on sites of iron oxides and oxyhydroxides. By increasing the rate of bioreduction of ferric iron, the solubility and availability of iron enhanced meaningfully. Royer et al. (2002 showed that bioreduction of hematite (common iron mineral in soils increased more than three times in the presence of AQDS and Shewanella putrefaciens comparedto control treatments. Previous works have mostly used synthetic minerals as electron acceptor in bioreduction process. Furthermore, the effect of quinones as electron acceptor for microorganisms were studied with poorly crystalline ferric iron oxides . The main objective of this study was to study the effect of AQS, humic acid and fulvic acid (as electron shuttle and Shewanella sp. and Pseudomonas aeruginosa, on bioreduction of native ferric iron in two acidic and calcareous soils. Materials and Methods: An experiment was conducted in a completely randomized design with factorial arrangement and three replications in vitro condition. The soil samples collected

  18. Diagnosing periprosthetic infection: false-positive intraoperative Gram stains.

    Science.gov (United States)

    Oethinger, Margret; Warner, Debra K; Schindler, Susan A; Kobayashi, Hideo; Bauer, Thomas W

    2011-04-01

    Intraoperative Gram stains have a reported low sensitivity but high specificity when used to help diagnose periprosthetic infections. In early 2008, we recognized an unexpectedly high frequency of apparent false-positive Gram stains from revision arthroplasties. The purpose of this report is to describe the cause of these false-positive test results. We calculated the sensitivity and specificity of all intraoperative Gram stains submitted from revision arthroplasty cases during a 3-month interval using microbiologic cultures of the same samples as the gold standard. Methods of specimen harvesting, handling, transport, distribution, specimen processing including tissue grinding/macerating, Gram staining, and interpretation were studied. After a test modification, results of specimens were prospectively collected for a second 3-month interval, and the sensitivity and specificity of intraoperative Gram stains were calculated. The retrospective review of 269 Gram stains submitted from revision arthroplasties indicated historic sensitivity and specificity values of 23% and 92%, respectively. Systematic analysis of all steps of the procedure identified Gram-stained but nonviable bacteria in commercial broth reagents used as diluents for maceration of periprosthetic membranes before Gram staining and culture. Polymerase chain reaction and sequencing showed mixed bacterial DNA. Evaluation of 390 specimens after initiating standardized Millipore filtering of diluent fluid revealed a reduced number of positive Gram stains, yielding 9% sensitivity and 99% specificity. Clusters of false-positive Gram stains have been reported in other clinical conditions. They are apparently rare related to diagnosing periprosthetic infections but have severe consequences if used to guide treatment. Even occasional false-positive Gram stains should prompt review of laboratory methods. Our observations implicate dead bacteria in microbiologic reagents as potential sources of false-positive Gram

  19. Near-UV laser treatment of extrinsic dental enamel stains.

    Science.gov (United States)

    Schoenly, J E; Seka, W; Featherstone, J D B; Rechmann, P

    2012-04-01

    The selective ablation of extrinsic dental enamel stains using a 400-nm laser is evaluated at several fluences for completely removing stains with minimal damage to the underlying enamel. A frequency-doubled Ti:sapphire laser (400-nm wavelength, 60-nanosecond pulse duration, 10-Hz repetition rate) was used to treat 10 extracted human teeth with extrinsic enamel staining. Each tooth was irradiated perpendicular to the surface in a back-and-forth motion over a 1-mm length using an ∼300-µm-diam 10th-order super-Gaussian beam with fluences ranging from 0.8 to 6.4 J/cm(2) . Laser triangulation determined stain depth and volume removed by measuring 3D surface images before and after irradiation. Scanning electron microscopy evaluated the surface roughness of enamel following stain removal. Fluorescence spectroscopy measured spectra of unbleached and photobleached stains in the spectral range of 600-800 nm. Extrinsic enamel stains are removed with laser fluences between 0.8 and 6.4 J/cm(2) . Stains removed on sound enamel leave behind a smooth enamel surface. Stain removal in areas with signs of earlier cariogenic acid attacks resulted in isolated and randomly located laser-induced, 50-µm-diam enamel pits. These pits contain 0.5-µm diam, smooth craters indicative of heat transfer from the stain to the enamel and subsequent melting and water droplet ejection. Ablation stalling of enamel stains is typically observed at low fluences (Laser ablation of extrinsic enamel stains at 400 nm is observed to be most efficient above 3 J/cm(2) with minimal damage to the underlying enamel. Unsound underlying enamel is also observed to be selectively removed after irradiation. Copyright © 2012 Wiley Periodicals, Inc.

  20. [Histochemical stains for minerals by hematoxylin-lake method].

    Science.gov (United States)

    Miyagawa, Makoto

    2013-04-01

    The present study was undertaken to establish the experimental animal model by histological staining methods for minerals. After intraperitoneal injections of minerals, precipitates deposited on the surface of the liver. Liver tissues were fixed in paraformaldehyde, embedded in paraffin and cut into thin sections which were used as minerals containing standard section. Several reagents for histological stains and spectrophotometry for minerals were applied in both test-tube experiments and stainings of tissue sections to test for minerals. Hematoxylin-lake was found of capable of staining minerals in tissue. A simple technique used was described for light microscopic detection of minerals.

  1. Utility of Gram staining for diagnosis of Malassezia folliculitis.

    Science.gov (United States)

    Tu, Wei-Ting; Chin, Szu-Ying; Chou, Chia-Lun; Hsu, Che-Yuan; Chen, Yu-Tsung; Liu, Donald; Lee, Woan-Ruoh; Shih, Yi-Hsien

    2018-02-01

    Malassezia folliculitis (MalF) mimics acne vulgaris and bacterial folliculitis in clinical presentations. The role of Gram staining in rapid diagnosis of MalF has not been well studied. In our study, 32 patients were included to investigate the utility of Gram staining for MalF diagnosis. The final diagnoses of MalF were determined according to clinical presentation, pathological result and treatment response to antifungal agents. Our results show that the sensitivity and specificity of Gram staining are 84.6% and 100%, respectively. In conclusion, Gram staining is a rapid, non-invasive, sensitive and specific method for MalF diagnosis. © 2017 Japanese Dermatological Association.

  2. Histopathological evaluation of ocular microsporidiosis by different stains

    Directory of Open Access Journals (Sweden)

    Sharma Savitri

    2006-06-01

    Full Text Available Abstract Background There is limited data on comparing stains in the detection of microsporidia in corneal biopsies. Hence we wanted to evaluate various stains for their ability to detect microsporidia in corneal tissue sections. Methods Four cases diagnosed with microsporidiosis on Hematoxylin and Eosin and Periodic Acid Schiff's stained sections of the corneal button between January 2002 and December 2004, were included. Further sections were prospectively stained with calcofluor white, Gram, Giemsa, Masson's trichrome, acridine orange, Gomori's methenamine silver, Gram's chromotrope and modified acid fast stain. The stained sections were analyzed for the spore characteristics in terms of size, shape, color contrast, cell wall morphology, waist band in cytoplasm and ease of detection. Results All sections showed microsporidial spores as 3 – 5 μm, oval bodies. 1% acid fast, Gram's chromotrope and GMS stains provided a reliable diagnosis of microsporidia as diagnostic waist band could be identified and good contrast helped distinguish the spores from inflammatory debris. Conclusion Considering the ease of performance, cost effectiveness and rapidity of the technique, 1% acid fast stain and Gram's chromotrope stain are ideal for the detection of microsporidia.

  3. Efficacy of in-house fluorescent stain for fungus

    Directory of Open Access Journals (Sweden)

    K. R. L. Surya Kirani

    2017-01-01

    Full Text Available Context: Mycotic infections are gaining importance in the present day medicine, and definite demonstration of fungus is essential for diagnosis. Small numbers of organisms in the smear can be identified by fluorescence microscopy. Calcofluor white (CFW fluorescent stain is a textile brightener mixed with Evans blue. It is expensive and not easily available. Aims: (1 To assess the efficacy of in-house CFW fluorescent stain for fungus in relation to conventional CFW stain, histopathology, and culture. (2 To determine sensitivity, specificity, negative predictive value (NPV, and positive predictive value (PPV with culture as gold standard. Settings and Design: One hundred cases of suspected dermatophytosis and 15 cases of systemic mycosis were included in the study. Subjects and Methods: The local whitener Ranipal is added with Robin blue, another brightener, and was used to stain teased fungal cultures. Skin, hair, and nails require pretreatment with potassium hydroxide (KOH. Biopsy slides require deparaffinization and pretreatment with KOH before staining. Conventional calcofluor stain, histopathology, and culture were done. Statistical Analysis Used: Statistical analysis was performed using sensitivity, specificity, NPV, and PPV. Results: The results are consistently comparable with conventional stain. The sensitivity was 100%, specificity was 93.3%, NPV was 100%, and PPV was 85.7%. It is also cost effective when compared to commercial stains. Conclusions: In-house stain can be used for screening of fungus in direct samples, biopsies as alternative in resource-constrained laboratories.

  4. Characterization of paint layers and stained glasses

    International Nuclear Information System (INIS)

    Biagi Maino, D.; Ciancabilla, L.; Gandolfi, G.; Maino, G.; Bruni, S.; Ferriani, S.; Visparelli, D.

    2000-01-01

    been made of the so available instruments, of both the hardware and developed software, to investigate some frescoes and stained glasses of XIV-XV centuries in the Basilica of St.Petronio in Bologna, in order to study the manufacturing techniques as well as to determine whether repairs have been carried out or substitutions made of damaged parts in the past times. (author)

  5. Colorimetric sensor for triphosphates and their application as a viable staining agent for prokaryotes and eukaryotes.

    Science.gov (United States)

    Ghosh, Amrita; Shrivastav, Anupama; Jose, D Amilan; Mishra, Sanjiv K; Chandrakanth, C K; Mishra, Sandhya; Das, Amitava

    2008-07-15

    The chromogenic complex 1 x Zn (where 1 is (E)-4-(4-dimethylamino-phenylazo)-N,N-bispyridin-2-ylmethyl-benzenesulfonamide) showed high affinity toward the phosphate ion in tetrabutylammonium phosphate in acetonitrile solution and could preferentially bind to adenosine triphosphate (ATP) in aqueous solution at physiological pH. This binding caused a visual change in color, whereas no such change was noticed with other related anions (adenosine monophosphate, adenosine diphosphate, pyrophosphate, and phosphate) of biological significance. Thus, 1 x Zn could be used as a staining agent for different biological cells through binding to the ATP, generated in situ by the mitochondria (in eukaryotes). For prokaryotes (bacteria) the cell membrane takes care of the cells' energy conversion, since they lack mitochondria. ATP is produced in their unique cell structure on the cell membrane, which is not found in any eukaryotes. These stained cells could be viewed with normal light microscopy. This reagent could even be used for distinguishing the gram-positive and the gram-negative bacteria (prokaryotes). This dye was found to be nonlipophilic in nature and nontoxic to living microbes (eukaryotes and prokaryotes). Further, stained cells were found to grow in their respective media, and this confirmed the maintenance of viability of the microbes even after staining, unlike with many other dyes available commercially.

  6. Alcian blue-stained particles in a eutrophic lake

    DEFF Research Database (Denmark)

    Worm, J.; Søndergaard, Morten

    1998-01-01

    We used a neutral solution of Alcian Blue to stain transparent particles in eutrophic Lake Frederiksborg Slotss0, Denmark. Alcian Blue-stained particles (ABSP) appeared to be similar to the so-called transparent exopolymer particles (TEP) identified with an acidic solution of Alcian Blue. Our...

  7. News from the Biological Stain Commission No. 11

    DEFF Research Database (Denmark)

    Lyon, H O; Horobin, R W

    2012-01-01

    The 11th issue of News from the Biological Stain Commission (BSC) provides our first impressions of the REACH and ECHA programs. We intend to give a more thorough account of what these important programs actually mean in later editions of News from the Biological Stain Commission. Under the heading...

  8. Sperm viability staining in ecology and evolution: potential pitfalls

    DEFF Research Database (Denmark)

    Holman, Luke

    2009-01-01

    The causes and consequences of variation in sperm quality, survival and ageing are active areas of research in ecology and evolution. In order to address these topics, many recent studies have measured sperm viability using fluorescent staining. Although sperm viability staining has produced a nu...

  9. Lasers or light sources for treating port-wine stains

    DEFF Research Database (Denmark)

    Faurschou, Annesofie; Olesen, Anne Braae; Leonardi-Bee, Jo

    2011-01-01

    Port-wine stains are birthmarks caused by malformations of blood vessels in the skin. Port-wine stains manifest themselves in infancy as a flat, red mark and do not regress spontaneously but may, if untreated, become darker and thicker in adult life. The profusion of various lasers and light...

  10. 21 CFR 864.1850 - Dye and chemical solution stains.

    Science.gov (United States)

    2010-04-01

    ... 21 Food and Drugs 8 2010-04-01 2010-04-01 false Dye and chemical solution stains. 864.1850 Section 864.1850 Food and Drugs FOOD AND DRUG ADMINISTRATION, DEPARTMENT OF HEALTH AND HUMAN SERVICES (CONTINUED) MEDICAL DEVICES HEMATOLOGY AND PATHOLOGY DEVICES Biological Stains § 864.1850 Dye and chemical...

  11. The use of special stains in liver biopsy interpretation: Implications ...

    African Journals Online (AJOL)

    Materials and Methods: The formalin fixed paraffin embedded blocks of liver biopsies reported in two histopathology laboratories between 2008 and 2013 were retrieved. These were stained with H and E and the following standard special stains for liver tissue histology – Perl's Prussian blue, reticulin, Sirius red, Shikata ...

  12. Decreased mortality associated with prompt Gram staining of blood cultures.

    Science.gov (United States)

    Barenfanger, Joan; Graham, Donald R; Kolluri, Lavanya; Sangwan, Gaurav; Lawhorn, Jerry; Drake, Cheryl A; Verhulst, Steven J; Peterson, Ryan; Moja, Lauren B; Ertmoed, Matthew M; Moja, Ashley B; Shevlin, Douglas W; Vautrain, Robert; Callahan, Charles D

    2008-12-01

    Gram stains of positive blood cultures are the most important factor influencing appropriate therapy. The sooner appropriate therapy is initiated, the better. Therefore, it is reasonable to expect that the sooner Gram stains are performed, the better. To determine the value of timely Gram stains and whether improvement in Gram stain turnaround time (TAT) is feasible, we compared data for matched pairs of patients with cultures processed promptly ( or =1 hour TAT) and then monitored TAT by control charting.In 99 matched pairs, average difference in time to detection of positive blood cultures within a pair of patients was less than 0.1 hour. For the less than 1 hour TAT group, the average TAT and crude mortality were 0.1 hour and 10.1%, respectively; for the 1 hour or longer TAT group, they were 3.3 hours and 19.2%, respectively (P Gram stains.

  13. Mapping stain distribution in pathology slides using whole slide imaging

    Directory of Open Access Journals (Sweden)

    Fang-Cheng Yeh

    2014-01-01

    Full Text Available Background: Whole slide imaging (WSI offers a novel approach to digitize and review pathology slides, but the voluminous data generated by this technology demand new computational methods for image analysis. Materials and Methods: In this study, we report a method that recognizes stains in WSI data and uses kernel density estimator to calculate the stain density across the digitized pathology slides. The validation study was conducted using a rat model of acute cardiac allograft rejection and another rat model of heart ischemia/reperfusion injury. Immunohistochemistry (IHC was conducted to label ED1 + macrophages in the tissue sections and the stained slides were digitized by a whole slide scanner. The whole slide images were tessellated to enable parallel processing. Pixel-wise stain classification was conducted to classify the IHC stains from those of the background and the density distribution of the identified IHC stains was then calculated by the kernel density estimator. Results: The regression analysis showed a correlation coefficient of 0.8961 between the number of IHC stains counted by our stain recognition algorithm and that by the manual counting, suggesting that our stain recognition algorithm was in good agreement with the manual counting. The density distribution of the IHC stains showed a consistent pattern with those of the cellular magnetic resonance (MR images that detected macrophages labeled by ultrasmall superparamagnetic iron-oxide or micron-sized iron-oxide particles. Conclusions: Our method provides a new imaging modality to facilitate clinical diagnosis. It also provides a way to validate/correlate cellular MRI data used for tracking immune-cell infiltration in cardiac transplant rejection and cardiac ischemic injury.

  14. Methods of staining and visualization of sphingolipid enriched and non-enriched plasma membrane regions of Arabidopsis thaliana with fluorescent dyes and lipid analogues

    Directory of Open Access Journals (Sweden)

    Blachutzik Jörg O

    2012-08-01

    Full Text Available Abstract Background Sterols and Sphingolipids form lipid clusters in the plasma membranes of cell types throughout the animal and plant kingdoms. These lipid domains provide a medium for protein signaling complexes at the plasma membrane and are also observed to be principal regions of membrane contact at the inception of infection. We visualized different specific fluorescent lipophilic stains of the both sphingolipid enriched and non-sphingolipid enriched regions in the plasma membranes of live protoplasts of Arabidopsis thaliana. Results Lipid staining protocols for several fluorescent lipid analogues in plants are presented. The most emphasis was placed on successful protocols for the single and dual staining of sphingolipid enriched regions and exclusion of sphingolipid enriched regions on the plasma membrane of Arabidopsis thaliana protoplasts. A secondary focus was placed to ensure that these staining protocols presented still maintain cell viability. Furthermore, the protocols were successfully tested with the spectrally sensitive dye Laurdan. Conclusion Almost all existing staining procedures of the plasma membrane with fluorescent lipid analogues are specified for animal cells and tissues. In order to develop lipid staining protocols for plants, procedures were established with critical steps for the plasma membrane staining of Arabidopsis leaf tissue and protoplasts. The success of the plasma membrane staining protocols was additionally verified by measurements of lipid dynamics by the fluorescence recovery after photobleaching technique and by the observation of new phenomena such as time dependent lipid polarization events in living protoplasts, for which a putative physiological relevance is suggested.

  15. Simulation of Zinc Release Affected by Microbial Inoculation and Salinity Levels in a non-sterile Calcareous Soil Using kinetic Models

    Directory of Open Access Journals (Sweden)

    hamidreza boostani

    2017-02-01

    Full Text Available Introduction: Zinc (Zn is an important nutrient element for humans and plants that controls many biochemical and physiological functions of living organisms. Zinc deficiency is common in high pH, low organic matter, carbonatic, saline and sodic soils. Salinity is a major abiotic environmental stresses that limits growth and production in arid and semi-arid regions of the world. Bioavailability of Zn is low in calcareous and saline soils having high levels of pH and calcium. Desorption of Zinc (Zn from soil as influenced by biological activities is one of the important factors that control Zn bioavailability. Few reports on the effects of salinity on the availability and desorption kinetics of Zn are available. Rupa et al. (2000 reported that increasing the salt concentration led to increase Zn desorption from soil due to ion competition on soil exchangeable sites. Different kinetic equations have been used to describe the release kinetics of nutrients. Reyhanitabar and Gilkes (2010 found that the power function model was the best equation to describe the release of Zn from some calcareous soil of Iran, whereas Baranimotlagh and Gholami (2013 stated that the best model for describing Zn desorption from 15 calcareous soils of Iran was the first-order equation.less attention has been paid to kinetics of Zn release by DTPA extractant over time by inoculation of plant growth promoting rhizobacteria and mycorrhizae fungi in comination with soil salinity.The objective of this study was to evaluate the effect of plant growth promoting rhizobacteria (PGPR and mycorrhizae fungi (MF inoculation on release kinetic of Zn in a calcareous soil at different salinity levels after in cornplantation Materials and Methods: A composite sample of bulk soil from the surface horizon (0-30 cm of a calcareous soil from southern part of Iran was collected, air dried, passed through 2 mm sieve, and thoroughly mixed. Routine soil analysis was performed to determine some

  16. Two new species of calcareous sponges (Porifera: Calcarea) from the deep Antarctic Eckström Shelf and a revised list of species found in Antarctic waters

    DEFF Research Database (Denmark)

    Rapp, Hans Tore; Göcke, Christian; Tendal, Ole Secher

    2013-01-01

    The paper reports on two new species of calcareous sponges (Porifera, Calcarea) from the Antarctic Weddell Sea, Clathrina brandtae sp. nov. and Leucetta delicata sp. nov., collected at 600 m depth during the ANT XXIV/2-SYSTCO expedition in January 2008. The new species are described based...... on a combination of morphological and molecular data. With these new additions the number of species of calcareous sponges reported from south of 50 degrees S (similar to south of the Polar Front) reaches 50 species. We report an exceptionally high degree of endemism within the group, and as many as 44 out...... of the 50 species of calcareous sponges are solely confined to Antarctic waters. An updated list of species of calcareous sponges from the area is provided....

  17. Using multi-proxy palaeoecology to test a relict status of refugial populations of calcareous-fen species in the Western Carpathians

    Czech Academy of Sciences Publication Activity Database

    Hájková, Petra; Horsák, M.; Hájek, Michal; Jankovská, Vlasta; Jamrichová, Eva; Moutelíková, J.

    2015-01-01

    Roč. 25, č. 4 (2015), s. 702-715 ISSN 0959-6836 Institutional support: RVO:67985939 Keywords : biodiversity * calcareous fen * fossil record * Holocene extinction * Western Carpathians Subject RIV: EF - Botanics Impact factor: 2.135, year: 2015

  18. On the nature of the calcareous substrate of a ferromanganese crust from the Vityaz Fracture Zone, Central Indian Ridge: Inferences on palaeoceanography

    Digital Repository Service at National Institute of Oceanography (India)

    Guptha, M.V.S.; Banerjee, R.; Mergulhao, L.

    A 15-cm-thick carbonate substrate encrusted with ferromanganese oxides from the Vityaz Fracture Zone, Central Indian Ridge was analysed to reconstruct the palaeoceanography of the region. Based on the calcareous nannoplankton assemblage, an early...

  19. Demonstration of lipofuscin and Nissl bodies in crystal violet stained sections using a fluorescence technique or pyronin Y stain.

    Science.gov (United States)

    Terr, L I

    1986-09-01

    This paper presents two simple, reliable methods for identification of lipofuscin and Nissl bodies in the same section. One method shows that lipofuscin stained with crystal violet retains its ability to fluoresce and can be observed under the fluorescence microscope after the stain has faded. Fading is accompanied by a gradual increase in the intensity of the fluorescence and is complete in about 5 min. Exciting illumination from this part of the spectrum also substantially fades staining of other autofluorescing tissue elements, such as lipids. Nonfluorescing structures, such as Nissl bodies, remain stained. By changing from transillumination with tungsten light to epifluorescent illumination and vice versa, both types of structures--Nissl bodies and lipofuscin--can be identified in the same section. The second technique uses pyronin Y for staining Nissl bodies in preparations previously stained with crystal violet. Nissl bodies are stained pink but lipofuscin remains violet. Lipofuscin in these sections also remains autofluorescent after the crystal violet stain has faded under violet or near-UV light.

  20. Zinc solubility and fractionation in cultivated calcareous soils irrigated with wastewater

    Energy Technology Data Exchange (ETDEWEB)

    Nazif, W. [Division of Agricultural and Environmental Sciences, School of Biosciences, University of Nottingham, Sutton Bonington, Leicestershire LE12 5RD (United Kingdom); Marzouk, E.R. [Division of Soil and Water Sciences, Faculty of Environmental Agricultural Sciences, Suez Canal University, North Sinai 45516 (Egypt); Perveen, S. [Department of Soil and Environmental Sciences, Khyber Pakhtunkhwa Agricultural University, Peshawar (Pakistan); Crout, N.M.J. [Division of Agricultural and Environmental Sciences, School of Biosciences, University of Nottingham, Sutton Bonington, Leicestershire LE12 5RD (United Kingdom); Young, S.D., E-mail: scott.young@nottingham.ac.uk [Division of Agricultural and Environmental Sciences, School of Biosciences, University of Nottingham, Sutton Bonington, Leicestershire LE12 5RD (United Kingdom)

    2015-06-15

    The solubility, lability and fractionation of zinc in a range of calcareous soils from Peshawar, Pakistan were studied (18 topsoils and 18 subsoils). The lability (E-value) of Zn was assessed as the fraction isotopically exchangeable with {sup 70}Zn{sup 2+}; comparative extractions included 0.005 M DTPA, 0.43 M HNO{sub 3} and a Tessier-style sequential extraction procedure (SEP). Because of the extremely low concentration of labile Zn the E-value was determined in soils suspended in 0.0001 M Na{sub 2}-EDTA which provided reliable analytical conditions in which approximately 20% of the labile Zn was dissolved. On average, only 2.4% of soil Zn was isotopically exchangeable. This corresponded closely to Zn solubilised by extraction with 0.005 DTPA and by the carbonate extraction step (F1 + F2) of the Tessier-style SEP. Crucially, although the majority of the soil CaCO{sub 3} was dissolved in F2 of the SEP, the DTPA dissolved only a very small proportion of the soil CaCO{sub 3}. This suggests a superficial carbonate-bound form of labile Zn, accessible to extraction with DTPA and to isotopic exchange. Zinc solubility from soil suspended in 0.01 M Ca(NO{sub 3}){sub 2} (PCO{sub 2} controlled at 0.03) was measured over three days. Following solution speciation using WHAM(VII) two simple solubility models were parameterised: a pH dependent ‘adsorption’ model based on the labile (isotopically exchangeable) Zn distribution coefficient (Kd) and an apparent solubility product (Ks) for ZnCO{sub 3}. The distribution coefficient showed no pH-dependence and the solubility model provided the best fit to the free ion activity (Zn{sup 2+}) data, although the apparent value of log{sub 10} Ks (5.1) was 2.8 log units lower than that of the mineral smithsonite (ZnCO{sub 3}). - Highlights: • Isotopically exchangeable Zn in the calcareous soils of Peshawar is extremely low. • There is no evidence of topsoil enrichment from the use of wastewater for irrigation. • Solubility

  1. Zinc solubility and fractionation in cultivated calcareous soils irrigated with wastewater

    International Nuclear Information System (INIS)

    Nazif, W.; Marzouk, E.R.; Perveen, S.; Crout, N.M.J.; Young, S.D.

    2015-01-01

    The solubility, lability and fractionation of zinc in a range of calcareous soils from Peshawar, Pakistan were studied (18 topsoils and 18 subsoils). The lability (E-value) of Zn was assessed as the fraction isotopically exchangeable with 70 Zn 2+ ; comparative extractions included 0.005 M DTPA, 0.43 M HNO 3 and a Tessier-style sequential extraction procedure (SEP). Because of the extremely low concentration of labile Zn the E-value was determined in soils suspended in 0.0001 M Na 2 -EDTA which provided reliable analytical conditions in which approximately 20% of the labile Zn was dissolved. On average, only 2.4% of soil Zn was isotopically exchangeable. This corresponded closely to Zn solubilised by extraction with 0.005 DTPA and by the carbonate extraction step (F1 + F2) of the Tessier-style SEP. Crucially, although the majority of the soil CaCO 3 was dissolved in F2 of the SEP, the DTPA dissolved only a very small proportion of the soil CaCO 3 . This suggests a superficial carbonate-bound form of labile Zn, accessible to extraction with DTPA and to isotopic exchange. Zinc solubility from soil suspended in 0.01 M Ca(NO 3 ) 2 (PCO 2 controlled at 0.03) was measured over three days. Following solution speciation using WHAM(VII) two simple solubility models were parameterised: a pH dependent ‘adsorption’ model based on the labile (isotopically exchangeable) Zn distribution coefficient (Kd) and an apparent solubility product (Ks) for ZnCO 3 . The distribution coefficient showed no pH-dependence and the solubility model provided the best fit to the free ion activity (Zn 2+ ) data, although the apparent value of log 10 Ks (5.1) was 2.8 log units lower than that of the mineral smithsonite (ZnCO 3 ). - Highlights: • Isotopically exchangeable Zn in the calcareous soils of Peshawar is extremely low. • There is no evidence of topsoil enrichment from the use of wastewater for irrigation. • Solubility products for smithsonite and hydrozincite fail to describe Zn 2

  2. Distinguishing Biologically Controlled Calcareous Biomineralization in Fossil Organisms Using Electron Backscatter Diffraction (EBSD)

    Science.gov (United States)

    Päßler, Jan-Filip; Jarochowska, Emilia; Bestmann, Michel; Munnecke, Axel

    2018-02-01

    Although carbonate-precipitating cyanobacteria are ubiquitous in aquatic ecosystems today, the criteria used to identify them in the geological record are subjective and rarely testable. Differences in the mode of biomineralization between cyanobacteria and eukaryotes, i.e. biologically induced calcification (BIM) vs. biologically controlled calcification (BCM), result in different crystallographic structures which might be used as a criterion to test cyanobacterial affinities. Cyanobacteria are often used as a ‘wastebasket taxon’, to which various microfossils are assigned. The lack of a testable criterion for the identification of cyanobacteria may bias their fossil record severely. We employed electron backscatter diffraction (EBSD) to investigate the structure of calcareous skeletons in two microproblematica widespread in Palaeozoic marine ecosystems: Rothpletzella, hypothesized to be a cyanobacterium, and an incertae sedis microorganism Allonema. We used a calcareous trilobite shell as a BCM reference. The mineralized structure of Allonema has a simple single-layered structure of acicular crystals perpendicular to the surface of the organism. The c-axes of these crystals are parallel to the elongation and thereby normal to the surface of the organism. EBSD pole figures and misorientation axes distribution reveal a fibre texture around the c-axis with a small degree of variation (up to 30°), indicating a highly ordered structure. A comparable pattern was found in the trilobite shell. This structure allows excluding biologically induced mineralization as the mechanism of shell formation in Allonema. In Rothpletzella, the c-axes of the microcrystalline sheath show a broader clustering compared to Allonema, but still reveal crystals tending to be perpendicular to the surface of the organism. The misorientation axes of adjacent crystals show an approximately random distribution. Rothpletzella also shares morphological similarities with extant cyanobacteria. We

  3. Productivity response of calcareous nannoplankton to Eocene Thermal Maximum 2 (ETM2

    Directory of Open Access Journals (Sweden)

    M. Dedert

    2012-05-01

    Full Text Available The Early Eocene Thermal Maximum 2 (ETM2 at ~53.7 Ma is one of multiple hyperthermal events that followed the Paleocene-Eocene Thermal Maximum (PETM, ~56 Ma. The negative carbon excursion and deep ocean carbonate dissolution which occurred during the event imply that a substantial amount (103 Gt of carbon (C was added to the ocean-atmosphere system, consequently increasing atmospheric CO2(pCO2. This makes the event relevant to the current scenario of anthropogenic CO2 additions and global change. Resulting changes in ocean stratification and pH, as well as changes in exogenic cycles which supply nutrients to the ocean, may have affected the productivity of marine phytoplankton, especially calcifying phytoplankton. Changes in productivity, in turn, may affect the rate of sequestration of excess CO2 in the deep ocean and sediments. In order to reconstruct the productivity response by calcareous nannoplankton to ETM2 in the South Atlantic (Site 1265 and North Pacific (Site 1209, we employ the coccolith Sr/Ca productivity proxy with analysis of well-preserved picked monogeneric populations by ion probe supplemented by analysis of various size fractions of nannofossil sediments by ICP-AES. The former technique of measuring Sr/Ca in selected nannofossil populations using the ion probe circumvents possible contamination with secondary calcite. Avoiding such contamination is important for an accurate interpretation of the nannoplankton productivity record, since diagenetic processes can bias the productivity signal, as we demonstrate for Sr/Ca measurements in the fine (<20 μm and other size fractions obtained from bulk sediments from Site 1265. At this site, the paleoproductivity signal as reconstructed from the Sr/Ca appears to be governed by cyclic changes, possibly orbital forcing, resulting in a 20–30% variability in Sr/Ca in dominant genera as obtained by ion probe. The ~13 to 21

  4. The Eocene Rusayl Formation, Oman, carbonaceous rocks in calcareous shelf sediments: Environment of deposition, alteration and hydrocarbon potential

    Energy Technology Data Exchange (ETDEWEB)

    Dill, H.G.; Wehner, H.; Kus, J. [Federal Institute for Geosciences and Natural Resources, P.O. Box 510163, D-30631 Hannover (Germany); Botz, R. [University Kiel, Geological-Paleontological Department, Olshausenstrasse 40-60, D-24118 Kiel (Germany); Berner, Z.; Stueben, D. [Technical University Karlsruhe, Institute for Mineralogy and Geochemistry, Fritz-Haber-Weg 2, D-76131 Karlsruhe (Germany); Al-Sayigh, A. [Sultan Qaboos University, Geological Dept. PO Box 36, Al-Khod (Oman)

    2007-10-01

    Paralic carbonaceous series intercalated among calcareous shelf sediments have seldom been investigated. During the early Eocene, calcareous and siliciclastic sediments were deposited on a wide shelf in front of low-reliefed hinterland in the Al Khawd region in NE Oman. The siliciclastic-calcareous sediments originated from strongly reworked debris of the Arabic Shield. The underlying Semail Ophiolite did not act as a direct source of debris but provided some heat to increase the maturity of carbonaceous rocks and modify the isotope signal of the calcareous minerals in the Rusayl Formation. A multidisciplinary approach involving sedimentology, mineralogy, chemistry, coal petrography and paleontology resulted in the establishment of nine stratigraphic lithofacies units and provides the reader with a full picture from deposition of the mixed carbonaceous-calcareous-siliciclastic rocks to the most recent stages of post-depositional alteration of the Paleogene formations. The calcareous Jafnayn Formation (lithofacies unit I) developed in a subtidal to intertidal regime, influenced episodically by storms. Deepening of the calcareous shelf towards younger series was ground to a halt by paleosols developing on a disconformity (lithofacies unit II) and heralding the onset of the Rusayl Formation. The stratigraphic lithofacies units III and IV reflect mangrove swamps which from time to time were flooded through washover fans from the open sea. The presence of Spinozonocolpites and the taxon Avicennia, which today belong to a coastal marsh vegetational community, furnish palynological evidence to the idea of extensive mangrove swamps in the Rusayl Formation [El Beialy, S.Y., 1998. Stratigraphic and palaeonenvironmental significance of Eocene palynomorphs from the Rusayl Shale Formation, Al Khawd, northern Oman. Review of Palaeobotany and Palynology 102, 249-258]. During the upper Rusayl Formation (lithofacies units V through VII) algal mats episodically flooded by marine

  5. Paleocene calcareous nannofossils biostratigraphy from the Sergipe Sub-basin, northeastern Brazil: Implications for this depositional environment

    Science.gov (United States)

    Andrade Oliveira, Geize Carolinne Correia; de Oliveira, Rick Souza; Monte Guerra, Rodrigo; de Lima Filho, Mario Ferreira

    2018-03-01

    This study reports on the biostratigraphy of Paleocene calcareous nannofossils and paleoenvironmental inferences based on five wells drilled on the offshore portion of the Sergipe Sub-basin. Five biostratigraphic zones were defined for the Paleocene in zones of Brazilian continental margin basins N-305, N-307, N-330, N-340 and N-350, and four hiatuses were identified based on the absence of marker species. These hiatuses were interpreted as excavations originated by turbulent to hyperpycnal flows, revealing an important application of biostratigraphy to better understand depositional environments that are often limited by little variation in lithology or low variation in the well log patterns. In Paleoecological terms, the Sergipe Sub-basin, in the Paleocene, experienced geological and environmental events similar to those of other sedimentary basins on the eastern passive continental margin of Brazil, but has a more complete biostratigraphic record of calcareous nannofossils.

  6. Ca (OH)2Nanoparticles Based on Acrylic Copolymers for the consolidation and protection of Ancient Egypt Calcareous Stone Monuments

    Science.gov (United States)

    Al-Dosari, Mohammad A.; Darwish, Sawsan S.; Adam, Mahmoud A.; Elmarzugi, Nagib A.; Al-Mouallimi, Nadia; Ahmed, Sayed M.

    2017-04-01

    The deterioration of calcareous stones materials used in artistic/architectural field is one of the most serious problems facing conservation today. The aim of this study was to evaluate the effectiveness of nanosized particles of calcium hydroxide (slaked lime) as a consolidation and protection material dispersed in acrylic copolymer, poly ethylmethacrylate/methylacrylate (70:30) (Poly (EMA/MA), for calcareous stone monuments and painted surfaces affected by different kinds of decay. The synthesis process of Ca (OH)2 nanoparticles/polymer nanocomposites have been prepared by in situ emulsion polymerization system. The prepared nanocomposite containing 5% of Ca (OH)2 nanoparticles showed obvious transparency features and represent nanocomposites coating technology with hydrophobic, consolidating and well protection properties.

  7. Phosphorus availability due to polyphosphates additions to alfalfa plants grown on alluvial and calcareous soils using tracer techniques

    International Nuclear Information System (INIS)

    Ismail, A.S.; Massoud, M.A.; Shalil, K.M.E.

    1985-01-01

    A pot experiment was carried out to compare the effect of different sources and levels of condensed phosphates, including ring and chain structured molecules, with orthophosphate on alfalfa plants grown on alluvial and highly calcareous soils using P-32-labelled fertilizers. Data indicate that application of different sources of P-fertilizers increased both dry matter content and total-P uptake by alfalfa plants over control in both soils. The fraction of phosphorus in plants derived from added fertilizers was higher from condensed phosphates than that derived from the other sources of phosphorus. The percentages of P-fraction derived from added fertilizers (y-values) were higher in calcareous soil than those in alluvial soil

  8. Ca (OH)2Nanoparticles Based on Acrylic Copolymers for the consolidation and protection of Ancient Egypt Calcareous Stone Monuments

    International Nuclear Information System (INIS)

    Al-Dosari, Mohammad A.; Ahmed, Sayed M.; Darwish, Sawsan S.; Adam, Mahmoud A.; Elmarzugi, Nagib A.; Al-Mouallimi, Nadia

    2017-01-01

    The deterioration of calcareous stones materials used in artistic/architectural field is one of the most serious problems facing conservation today. The aim of this study was to evaluate the effectiveness of nanosized particles of calcium hydroxide (slaked lime) as a consolidation and protection material dispersed in acrylic copolymer, poly ethylmethacrylate/methylacrylate (70:30) (Poly (EMA/MA), for calcareous stone monuments and painted surfaces affected by different kinds of decay. The synthesis process of Ca (OH) 2 nanoparticles/polymer nanocomposites have been prepared by in situ emulsion polymerization system. The prepared nanocomposite containing 5% of Ca (OH) 2 nanoparticles showed obvious transparency features and represent nanocomposites coating technology with hydrophobic, consolidating and well protection properties. (paper)

  9. A preliminary spatial-temporal study of some soil characteristics in the calcareous massif of Sicó, Portugal.

    Science.gov (United States)

    Torres, Maria Odete; Neves, Maria Manuela

    2016-04-18

    The mountainous massif of Sicó, in the centre of Portugal, is an extensive area composed of calcareous Jurassic formations. Hillside calcareous soils, with high pH, present chemical restrictions to support plant growth and are subjected to important erosion processes leading to their degradation if not protected by vegetation. In a first year of study some soil physicochemical characteristics have been measured in some geo-referenced locations of a larger design experiment and an exploratory spatial analysis has been performed. The objective of this study was to present some suggestions in order to give sustainable phosphorus fertiliser recommendations aiming to establish pastures in these soils and thus support traditional livestock activity. Ten years apart, those soil characteristics have been measured again in the same locations and comparisions have been made. The objective was to understand the variability of the soil properties under study in order to better adequate the fertiliser soil management regarding the area restoration.

  10. Efficacy of SYBR 14/propidium iodide viability stain for the amphibian chytrid fungus Batrachochytrium dendrobatidis.

    Science.gov (United States)

    Stockwell, M P; Clulow, J; Mahony, M J

    2010-01-25

    The amphibian chytrid fungus Batrachochytrium dendrobatidis is a recently described pathogen that has been implicated as a causal agent in the global decline in amphibians. Research into its biology and epidemiology has frequently involved in vitro experimentation. However, this research is currently limited by the inability to differentiate between viable and inviable zoospores. Stains are frequently used to determine cell viability, and this study tested a 2-colour fluorescence assay for the detection and quantification of viable B. dendrobatidis zoospores. The results show that the nucleic acid stains SYBR 14 and propidium iodide are effective in distinguishing live from dead zoospores, and a protocol has been optimized for their use. This viability assay provides an efficient and reliable tool that will have applications in B. dendrobatidis challenge and amphibian exposure experiments.

  11. Kinetic behavior of Fe(o,o-EDDHA)-humic substance mixtures in several soil components and in calcareous soils.

    Science.gov (United States)

    Cerdán, Mar; Alcañiz, Sara; Juárez, Margarita; Jordá, Juana D; Bermúdez, Dolores

    2007-10-31

    Ferric ethylenediamine- N, N'-bis-(o-hydroxyphenylacetic)acid chelate (Fe(o, o-EDDHA)) is one of the most effective Fe fertilizers in calcareous soils. However, humic substances are occasionally combined with iron chelates in drip irrigation systems in order to lower costs. The reactivity of iron chelate-humic substance mixtures in several soil components and in calcareous soils was investigated through interaction tests, and their behavior was compared to the application of iron chelates and humic substances separately. Two commercial humic substances and two Fe(o, o-EDDHA) chelates (one synthesized in the laboratory and one commercial) were used to prepare iron chelate-humic substance mixtures at 50% (w/w). Various soil components (calcium carbonate, gibbsite, amorphous iron oxide, hematite, tenorite, zincite, amorphous Mn oxide, and peat) and three calcareous soils were shaken for 15 days with the mixtures and with iron chelate and humic substance solutions. The kinetic behavior of Fe(o, o-EDDHA) and Fe non-(o,o-EDDHA) (Fe bonded to (o,p-EDDHA) and other polycondensated ligands) and of the different nutrients solubilized after the interaction assay was determined. The results showed that the mixtures did not significantly reduce the retention of Fe(o, o-EDDHA) and Fe non-(o,o-EDDHA) in the soil components and the calcareous soils compared to the iron chelate solutions, but they did produce changes in the retention rate. Moreover, the competition between humic substances and synthetic chelating agents for complexing metal cations limited the effectiveness of the mixtures to mobilize nutrients from the substrates. The presence of Fe(o, p-EDDHA) and other byproducts in the commercial iron chelate had an important effect on the evolution of Fe(o, o-EDDHA) and the nutrient solubilization process.

  12. Uranium geochemistry in a calcareous peat: mineral-organic-microorganisms interactions and implications on uranium mobility in a contaminated soil

    International Nuclear Information System (INIS)

    Phrommavanh, V.; Descostes, M.; L'Orphelin, J.M.; Beaucaire, C.; Gaudet, J.P.

    2009-01-01

    The authors discuss the different approaches and techniques which have been implemented to study the behaviour of uranium in an as complex medium as a natural peat, in this case, a calcareous peat located on an old industrial site which was dedicated to uranium processing and which is now being decontaminated. They report and comment a chemical and mineralogical characterization of this peat, its hydrochemical characterization, and a microbial flora characterization

  13. Effect of Melamine Sponge on Tooth Stain Removal.

    Science.gov (United States)

    Otsuka, Takero; Kawata, Toshitsugu

    2015-01-01

    To investigate the stain removal ability of melamine sponge before aesthetic tooth whitening in extracted teeth. Melamine sponge of thickness 40 mm was compressed and the destruction of the partition wall structure during the compression process was examined under a stereoscopic microscope. An extracted human tooth was cleaned by normal polishing or with melamine sponge for 90 s. To evaluate the stain level, the tooth surfaces were photographed under a stereoscopic microscope at 0, 30, 60 and 90 s. The residual stained region was traced in a high-magnification photograph, and the stain intensity was presented as a change, relative to the intensity before the experiment (0 s). Mechanical cleaning by toothbrushing produced polishing scratches on the tooth surface, whereas use of the melamine sponge resulted in only minimal scratches. As the compression level increased, the stain-removing effect tended to become stronger. Melamine sponge can remove stains from the tooth surface more effectively and less invasively compared to a conventional toothbrush. As no new scratches are made on the tooth surface when using a melamine sponge brush, the risk of re-staining is reduced. Cleaning using a melamine sponge brush can be easily and effectively performed at home and in a dental office.

  14. Western Blot of Stained Proteins from Dried Polyacrylamide Gels

    Science.gov (United States)

    Gruber, Claudia; Stan-Lotter, Helga

    1996-01-01

    Western blotting of proteins is customarily performed following their separation on polyacrylamide gels, either prior to staining (1) or, as recently reported, following staining (2). We describe here Western blotting with stained gels, which had been dried and some of which had been stored for years. This procedure permits immunological analysis of proteins, to which antisera may have become available only later, or where the application of newly developed sensitive detection methods is desired. Once rehydration of the gels is achieved, proteins can be-transferred to blotting membranes by any appropriate protocol. Proteins stained with Coomassie Blue have to be detected with a non-chromogenic method, such as the film-based enhanced chemiluminescence (ECL)2) procedure (3). Silver stained proteins, which transfer in the colorless form, may be visualized by any detection method, although, because of the usually very low amounts of proteins, detection by ECL is preferable. Blotting of stained proteins from rehydrated gels is as rapid and as quantitative as from freshly prepared gels, in contrast to blotting from wet stained gels, which requires extensive washing and results in low transfer efficiency (2). Together with a photographic record of the gel pattern, unambiguous identification of immunoreactive proteins from complex mixtures is possible. Some further applications of this work are discussed.

  15. [Usefulness of sputum Gram staining in community-acquired pneumonia].

    Science.gov (United States)

    Sato, Tadashi; Aoshima, Masahiro; Ohmagari, Norio; Tada, Hiroshi; Chohnabayashi, Naohiko

    2002-07-01

    To evaluate the usefulness of sputum gram staining in community-acquired pneumonia (CAP), we reviewed 144 cases requiring hospitalization in the last 4 years. The sensitivity was 75.5%, specificity 68.2%, positive predictive value 74.1%, negative predictive value 69.8%, positive likelihood ratio 2.37, negative likelihood ratio 0.36 and accuracy 72.2% in 97 cases. Both sputum gram staining and culture were performed. Concerning bacterial pneumonia (65 cases), we compared the Gram staining group (n = 33), which received initial antibiotic treatment, based on sputum gram staining with the Empiric group (n = 32) that received antibiotics empirically. The success rates of the initial antibiotic treatment were 87.9% vs. 78.1% (P = 0.473); mean hospitalization periods were 9.67 vs. 11.75 days (P = 0.053); and periods of intravenous therapy were 6.73 vs. 7.91 days (P = 0.044), respectively. As for initial treatment, penicillins were used in the Gram staining group more frequently (P gram staining is useful for the shortening of the treatment period and the appropriate selection of initial antibiotics in bacterial pneumonia. We believe, therefore, that sputum gram staining is indispensable as a diagnostic tool CAP.

  16. Improved method for combination of immunocytochemistry and Nissl staining.

    Science.gov (United States)

    Kádár, Andrea; Wittmann, Gábor; Liposits, Zsolt; Fekete, Csaba

    2009-10-30

    Nissl staining is a widely used method to study morphology and pathology of neural tissue. After standard immunocytochemistry, the Nissl staining labels only the nucleus of neurons and the characteristic staining of the neuronal perikarya is absent or very weak. We hypothesized that the RNA degradation during the immunocytochemical treatment results in the loss of cytoplasmic staining with Nissl-dyes. To test this hypothesis, we used RNAse-free conditions for all steps of immunostaining. To further prevent the RNA-degradation by RNAse contaminations, the RNAse inhibitor heparin was added to all antibody-containing solutions. The efficiency of Nissl staining after standard and RNAse-free double-labeling immunocytochemistry was compared using antibodies against c-Fos and neuropeptide Y (NPY) on tissues of rats refed after 3 days of fasting. After standard immunocytochemistry, the Nissl-staining labeled the nuclei of neurons and only very faintly the cytoplasm of these cells. The RNAse-free treatment did not alter the distribution of immunoreaction signal, but preserved the staining of neuronal perikarya by the Nissl-dyes. In conclusion, the RNAse-free conditions during immunocytochemistry allow the labeling of neuronal perikarya by Nissl-dyes. The described method facilitates the mapping of immunocytochemical signals and makes possible the light microscopic examination of the innervation of neurons identified by their nuclear protein content.

  17. LANTHANUM STAINING OF THE SURFACE COAT OF CELLS

    Science.gov (United States)

    Shea, Stephen M.

    1971-01-01

    Among the techniques which have been reported to stain the surface coat of cells, for electron microscopy, is lanthanum staining en bloc. Similarly, the presence of the cationic dye, Alcian blue 8GX, in a primary glutaraldehyde fixative has been reported to improve the preservation of the surface coat of cells of many types; however, the preserved coat is not very electron opaque unless thin sections are counterstained. The present paper shows that for several rat tissues lanthanum staining en bloc is an effective electron stain for the cell surface, giving excellent contrast, if combined sequentially with prefixation in an aldehyde fixative containing Alcian blue. The cationic substance cetylpyridinium chloride was found to have a similar effect to that of Alcian blue in enhancing the lanthanum staining of the surface coat material of the brush border of intestinal epithelial cells. The patterns of lanthanum staining obtained for the tissues studied strikingly resemble those reported in the literature where tissues are stained by several standard methods for demonstrating mucosubstances at the ultrastructural level. This fact and the reproduction of the effect of Alcian blue by cetylpyridinium chloride constitute a persuasive empirical argument that the material visualized is a mucopolysaccharide or mucopolysaccharide-protein complex. PMID:4108476

  18. Silver and Cyanine Staining of Oligonucleotides in Polyacrylamide Gel.

    Science.gov (United States)

    Tang, Weizhong; Zhou, Huafu; Li, Wei

    2015-01-01

    To explore why some oligonucleotides in denaturing polyacrylamide gel could not be silver-stained, 134 different oligonucleotides were analyzed using denaturing polyacrylamide gel electrophoresis stained with silver and asymmetric cyanine. As a result, we found that the sensitivity of oligos (dA), (dC), (dG) and (dT) to silver staining could be ranged as (dA) > (dG) > (dC) > (dT) from high to low. It was unexpected that oligo (dT) was hard to be silver-stained. Moreover, the silver staining of an oligonucleotide containing base T could be partially or completely inhibited by base T. The inhibition of silver staining by base T was a competitive inhibition which could be affected by the amounts of the argyrophil nucleobase and base T, the cis-distance between the argyrophil nucleobase and base T, and the gel concentration. The changes of the intensity of an oligonucleotide band caused by the changes of DNA base composition were diverse and interesting. The intensity of some oligonucleotide bands would significantly change when the changes of DNA base composition accumulated to a certain extent (usually ≥ 4 nt). The sensitivity of cyanine staining of ≤ 11-nt long oligonucleotides could be enhanced about 250-fold by fixing the gels with methanol fixing solution.

  19. A novel washing algorithm for underarm stain removal

    Science.gov (United States)

    Acikgoz Tufan, H.; Gocek, I.; Sahin, U. K.; Erdem, I.

    2017-10-01

    After contacting with human sweat which comprise around 27% sebum, anti-perspirants comprising aluminium chloride or its compounds form a jel-like structure whose solubility in water is very poor. In daily use, this jel-like structure closes sweat pores and hinders wetting of skin by sweat. However, when in contact with garments, they form yellowish stains at the underarm of the garments. These stains are very hard to remove with regular machine washing. In this study, first of all, we focused on understanding and simulating such stain formation on the garments. Two alternative procedures are offered to form jel-like structures. On both procedures, commercially available spray or deo-stick type anti-perspirants, standard acidic and basic sweat solutions and artificial sebum are used to form jel-like structures, and they are applied on fabric in order to get hard stains. Secondly, after simulation of the stain on the fabric, we put our efforts on developing a washing algorithm specifically designed for removal of underarm stains. Eight alternative washing algorithms are offered with varying washing temperature, amounts of detergent, and pre-stain removal procedures. Better algorithm is selected by comparison of Tristimulus Y values after washing.

  20. Effect of Arbuscular Mycorrhizae on zinc nutrition of maize grow in calcareous soil amended with different phosphorus sources

    International Nuclear Information System (INIS)

    Aly, S.S.M.; EL-Ghandour, I. A.

    2001-01-01

    Arbuscular mycorrhizal fungi (AMF) are known to improve P nutrition of plants. The information of AMF effects on corn Zn nutrition under P fertilization in calcareous soil is limited. A greenhouse experiment was carried out using calcareous soil and two P-sources i.e single superphosphate and rock phosphate (with full and one third of recommended dose). to evaluate the ability of AMF on improving Zn nutrition in maize plants. Labelled 65 ZnSo 4 was added at rates of 0.10 and 20 mg Zn Kg -1 soil. Zinc uptake and dry mater of corn shoots were improved as a result of AMF inoculation. The maximum improvement was recorded with super-P fertilizer in combination with 10 or 20 mg Zn Kg -1 soil for non-inoculated and AMF inoculated plants. respectively. The amount of Zn in non-inoculated and AMF inoculated plants. respectively. The amount of ZnSo 4 utilized plant derived from fertilizer.(Zndff) and the percent of ZnSo 4 utilization by corn plants were increased when ZnSo 4 was added at rate of 10 mg Zn Kg -1 soil in the presence of super-P fertilizer. Inoculated plants with AMF had higher Zndff content and U% than non-inoculated ones and the greater Zndff and superphosphate fertilizer. It could be concluded that. AMF is useful method utilization by corn plants grown in calcareous soil

  1. EDTA and HCl leaching of calcareous and acidic soils polluted with potentially toxic metals: remediation efficiency and soil impact.

    Science.gov (United States)

    Udovic, Metka; Lestan, Domen

    2012-07-01

    The environmental risk of potentially toxic metals (PTMs) in soil can be diminished by their removal. Among the available remediation techniques, soil leaching with various solutions is one of the most effective but data about the impact on soil chemical and biological properties are still scarce. We studied the effect of two common leaching agents, hydrochloric acid (HCl) and a chelating agent (EDTA) on Pb, Zn, Cd removal and accessibility and on physico-chemical and biological properties in one calcareous, pH neutral soil and one non-calcareous acidic soil. EDTA was a more efficient leachant compared to HCl: up to 133-times lower chelant concentration was needed for the same percentage (35%) of Pb removal. EDTA and HCl concentrations with similar PTM removal efficiency decreased PTM accessibility in both soils but had different impacts on soil properties. As expected, HCl significantly dissolved carbonates from calcareous soil, while EDTA leaching increased the pH of the acidic soil. Enzyme activity assays showed that leaching with HCl had a distinctly negative impact on soil microbial and enzyme activity, while leaching with EDTA had less impact. Our results emphasize the importance of considering the ecological impact of remediation processes on soil in addition to the capacity for PTM removal. Copyright © 2012 Elsevier Ltd. All rights reserved.

  2. Reactivity and effectiveness of traditional and novel ligands for multi-micronutrient fertilization in a calcareous soil.

    Science.gov (United States)

    López-Rayo, Sandra; Nadal, Paloma; Lucena, Juan J

    2015-01-01

    This study compares the effectiveness of multi-micronutrient formulations containing iron (Fe), manganese (Mn), and zinc (Zn) with traditional (EDTA, DTPA, HEEDTA, and EDDHAm) or novel chelates (o,p-EDDHA, S,S-EDDS, and IDHA) and natural complexing agents (gluconate and lignosulfonate). The stability and reactivity of the formulations were studied on batch experiments with calcareous soil and by speciation modeling. Formulations containing traditional ligands maintained higher Mn but lower Zn concentration in soil solution than the novel ligands. The gluconate and lignosulfonate maintained low concentrations of both Mn and Zn in soil solution. Selected formulations were applied into calcareous soil and their efficacy was evaluated in a pot experiment with soybean. The formulation containing DTPA led to the highest Zn concentration in plants, as well as the formulation containing S,S-EDDS in the short-term, which correlated with its biodegradability. The application of traditional or novel ligands in formulations did not result in sufficient plant Mn concentrations, which was related to the low Mn stability observed for all formulations under moderate oxidation conditions. The results highlight the need to consider the effect of metals and ligands interactions in multi-nutrient fertilization and the potential of S,S-EDDS to be used for Zn fertilization. Furthermore, it is necessary to explore new sources of Mn fertilization for calcareous soils that have greater stability and efficiency, or instead to use foliar fertilization.

  3. Reactivity and effectiveness of traditional and novel ligands for multi-micronutrient fertilization in a calcareous soil

    Directory of Open Access Journals (Sweden)

    Sandra eLópez-Rayo

    2015-09-01

    Full Text Available This study compares the effectiveness of multi-micronutrient formulations containing Fe, Mn, and Zn with traditional (EDTA, DTPA, HEEDTA, EDDHAm or novel chelates (o,p-EDDHA, S,S-EDDS, IDHA and natural complexing agents (gluconate and lignosulfonate. The stability and reactivity of the formulations were studied on batch experiments with calcareous soil and by speciation modeling. Formulations containing traditional ligands maintained higher Mn but lower Zn concentration in soil solution than the novel ligands. The gluconate and lignosulfonate maintained low concentrations of both Mn and Zn in soil solution. Selected formulations were applied into calcareous soil and their efficacy was evaluated in a pot experiment with soybean. The formulation containing DTPA led to the highest Zn concentration in plants, as well as the formulation containing S,S-EDDS in the short-term, which correlated with its biodegradability. The application of traditional or novel ligands in formulations did not result in sufficient plant Mn concentrations, which was related to the low Mn stability observed for all formulations under moderate oxidation conditions. The results highlight the need to consider the effect of metals and ligands interactions in multi-nutrient fertilization and the potential of S,S-EDDS to be used for Zn fertilization. Furthermore, it is necessary to explore new sources of Mn fertilization for calcareous soils that have greater stability and efficiency, or instead to use foliar fertilization.

  4. Crop Yield and Soil Properties in the First 3 Years After Biochar Application to a Calcareous Soil

    Institute of Scientific and Technical Information of China (English)

    LIANG Feng; LI Gui-tong; LIN Qi-mei; ZHAO Xiao-rong

    2014-01-01

    It remains unclear whether biochar applications to calcareous soils can improve soil fertility and crop yield. A long-term ifeld experiment was established in 2009 so as to determine the effect of biochar on crop yield and soil properties in a calcareous soil. Five treatments were: 1) straw incorporation; 2) straw incorporation with inorganic fertilizer; 3), 4) and 5) straw incorporation with inorganic fertilizer, and biochar at 30, 60, and 90 t ha-1, respectively. The annual yield of either winter wheat or summer maize was not increased signiifcantly following biochar application, whereas the cumulative yield over the ifrst 4 growing seasons was signiifcantly increased. Soil pH, measured in situ, was increased by a maximum of 0.35 units after 2 yr following biochar application. After 3 yr, soil bulk density signiifcantly decreased while soil water holding capacity increased with adding biochar of 90 t ha-1. Alkaline hydrolysable N decreased but exchangeable K increased due to biochar addition. Olsen-P did not change compared to the treatment without biochar. The results suggested that biochar could be used in calcareous soils without yield loss or signiifcant impacts on nutrient availability.

  5. Reactivity and effectiveness of traditional and novel ligands for multi-micronutrient fertilization in a calcareous soil

    Science.gov (United States)

    López-Rayo, Sandra; Nadal, Paloma; Lucena, Juan J.

    2015-01-01

    This study compares the effectiveness of multi-micronutrient formulations containing iron (Fe), manganese (Mn), and zinc (Zn) with traditional (EDTA, DTPA, HEEDTA, and EDDHAm) or novel chelates (o,p-EDDHA, S,S-EDDS, and IDHA) and natural complexing agents (gluconate and lignosulfonate). The stability and reactivity of the formulations were studied on batch experiments with calcareous soil and by speciation modeling. Formulations containing traditional ligands maintained higher Mn but lower Zn concentration in soil solution than the novel ligands. The gluconate and lignosulfonate maintained low concentrations of both Mn and Zn in soil solution. Selected formulations were applied into calcareous soil and their efficacy was evaluated in a pot experiment with soybean. The formulation containing DTPA led to the highest Zn concentration in plants, as well as the formulation containing S,S-EDDS in the short-term, which correlated with its biodegradability. The application of traditional or novel ligands in formulations did not result in sufficient plant Mn concentrations, which was related to the low Mn stability observed for all formulations under moderate oxidation conditions. The results highlight the need to consider the effect of metals and ligands interactions in multi-nutrient fertilization and the potential of S,S-EDDS to be used for Zn fertilization. Furthermore, it is necessary to explore new sources of Mn fertilization for calcareous soils that have greater stability and efficiency, or instead to use foliar fertilization. PMID:26442065

  6. Evolution of Calcareous Deposits and Passive Film on 304 Stainless Steel with Cathodic Polarization in Sea Water

    Directory of Open Access Journals (Sweden)

    Tianxiang Sun

    2018-05-01

    Full Text Available The change of protective current density, the formation and growth of calcareous deposits, and the evolution of passive film on 304 stainless steel (SS were investigated at different potentials of cathodic polarization in sea water. Potentiostatic polarization, electrochemical impedance spectroscopy (EIS, and surface analysis techniques of scanning electron microscopy (SEM, energy dispersive X-ray (EDX microanalysis and X-ray diffraction (XRD were used to characterize the surface conditions. It was found that the protective current density was smaller for keeping polarization at −0.80 V (vs. saturated calomel electrode (SCE, same as below than that at −0.65 V. The calcareous deposits could not be formed on 304 SS with polarization at −0.50 V while it was well protected. The formation rate, the morphology, and the constituent of the calcareous deposits depended on the applied potential. The resistance of passive film on 304 SS decreased at the first stage and then increased when polarized at −0.80 V and −0.65 V, which was related to the reduction and the repair of passive film. For the stainless steel polarized at −0.50 V, the film resistance increased with polarization time, indicating that the growth of oxide film was promoted.

  7. Standardization in biological staining. The influence of dye manufacturing

    DEFF Research Database (Denmark)

    Lyon, H

    2000-01-01

    not have been subjected to quality assessment either internally by the producer or vendor or externally by independent investigators or organizations such as the Biological Stain Commission. Concerted attempts at standardization in Europe are discussed. The latest results of this work, the European...... standard EN 12376, is presented. This standard is concerned with information supplied by the manufacturer with in vitro diagnostic reagents for biological staining. The standard has been prepared by a Working Group on Staining in Biology under Technical Committee 140, In Vitro Medical Devices...

  8. A new technique for Gram staining paraffin-embedded tissue.

    Science.gov (United States)

    Engbaek, K; Johansen, K S; Jensen, M E

    1979-01-01

    Five techniques for Gram staining bacteria in paraffin sections were compared on serial sections of pulmonary tissues from eight bacteriological necropsies. Brown and Hopp's method was the most satisfactory for distinguishing Gram-positive and Gram-negative bacteria. However, this method cannot be recommended as the preparations were frequently overstained, and the Gram-negative bacteria were stained indistinctly. A modification of Brown and Hopps' method was developed which stains larger numbers of Gram-negative bacteria and differentiates well between different cell types and connective tissue, and there is no risk of overstaining. PMID:86548

  9. Long-range crystalline order in spicules from the calcareous sponge Paraleucilla magna (Porifera, Calcarea).

    Science.gov (United States)

    Rossi, Andre L; Campos, Andrea P C; Barroso, Madalena M S; Klautau, Michelle; Archanjo, Bráulio S; Borojevic, Radovan; Farina, Marcos; Werckmann, Jacques

    2014-09-01

    We investigated the ultrastructure and crystallographic orientation of spicules from the calcareous sponge Paraleucilla magna (subclass Calcaronea) by transmission and scanning electron microscopy using two different methods of sample preparation: ultramicrotomy and focused ion beam (FIB). It was found that the unpaired actine from the spicules was oriented in the [211] zone axis. The plane that contains the unpaired actine and divides symmetrically the paired actines is the (-120). This plane is a mirror plane of the hexagonal lattice system. All the spicule types analyzed presented the same crystallographic orientation. Electron nanodiffraction maps from 4μm×4μm regions prepared by FIB showed disorientation of <2° between diffraction patterns obtained from neighbor regions, indicating the presence of a unique, highly aligned calcite crystalline phase. Among the eight FIB sections obtained, four presented high pore density. In one section perpendicular to the actine axis pores were observed only in the center of the spicule aligned in a circular pattern and surrounded by a faint circular contour with a larger radius. The presence of amorphous carbon representative of organic molecules detected by electron energy loss spectroscopy was correlated neither with porosity nor with specific lattice planes. Copyright © 2014 Acta Materialia Inc. Published by Elsevier Ltd. All rights reserved.

  10. Oxygen and carbon isotopes of Recent calcareous nannofossils as paleoceanographic indicators

    International Nuclear Information System (INIS)

    Goodney, D.E.; Margolis, S.V.; Dudley, W.C.; Kroopnick, P.; Williams, D.F.

    1980-01-01

    Delta 18 O and delta 13 C values for several species of planktonic foraminifera and calcareous nannofossils from Recent deep-sea sediments have been studied in order to evaluate their paleoceanographic and paleotemperature potential. Nannofossils from Indian Ocean core-tops reflect isotopic temperatures as warm as, or warmer than, the temperatures reported for shallow-dwelling planktonic forminifera from the same samples. In general, deep-sea sediment samples from the world's major oceans indicate that nannofossil delta 18 O values are from 0.5 to 1 per thousand heavier than shallow-dwelling planktonic foraminifera. Although nannofossil delta 18 O values depart from thermodynamic equilibrium with oceanic surface water temperatures, the delta 18 O temperature trend parallels that of surface-dwelling planktonic foraminifera. Nannofossil delta 13 C values also depart equilibrium with surface water delta 13 C-ΣCO 2 values. A comparison of nannofossil delta 13 C data with that from planktonic foraminifera suggests that the rate of primary productivity in different water masses may be influencing the delta 13 C carbonate-secreting phytoplankton and zooplankton. (Auth.)

  11. Influence of long-term fertilization on the selenium content of calcareous chernozem soil.

    Science.gov (United States)

    Blagojević, S; Jakovljević, M; Zarković, B

    1998-01-01

    Available data on the selenium (Se) content in Yugoslavian soils indicate that the element is present in small amounts (chernozem soil. The experiment of the Maize Research Institute in Belgrade was set up in 1971 and soil samples were examined by chemical analysis after 23 years. The following important conclusions can be drawn based on the analytical data obtained. The total content of Se in the investigated experimental variants in calcareous chernozem soil ranges from 166 to 593 microg/kg. All the variants had a higher content of Se than soil samples taken before the experiment was set up. Comparison with the control (variant without fertilizers) indicated that the Se content increased in the experimental variants where farmyard manure had been applied. This effect was noticed to a depth of 80 cm. Application of farmyard manure should be considered as a means of increasing the levels of Se in Se-deficient soil. Correlation coefficients between total Se content in the soil and some important agrochemical properties of the investigated soils are presented in this paper.

  12. Factors affecting cadmium absorbed by pistachio kernel in calcareous soils, southeast of Iran.

    Science.gov (United States)

    Shirani, H; Hosseinifard, S J; Hashemipour, H

    2018-03-01

    Cadmium (Cd) which does not have a biological role is one of the most toxic heavy metals for organisms. This metal enters environment through industrial processes and fertilizers. The main objective of this study was to determine the relationships between absorbed Cd by pistachio kernel and some of soil physical and chemical characteristics using modeling by stepwise regression and Artificial Neural Network (ANN), in calcareous soils in Rafsanjan region, southeast of Iran. For these purposes, 220 pistachio orchards were selected, and soil samples were taken from two depths of 0-40 and 40-80cm. Besides, fruit and leaf samples from branches with and without fruit were taken in each sampling point. The results showed that affecting factors on absorbed Cd by pistachio kernel which were obtained by regression method (pH and clay percent) were not interpretable, and considering unsuitable vales of determinant coefficient (R 2 ) and Root Mean Squares Error (RMSE), the model did not have sufficient validity. However, ANN modeling was highly accurate and reliable. Based on its results, soil available P and Zn and soil salinity were the most important factors affecting the concentration of Cd in pistachio kernel in pistachio growing areas of Rafsanjan. Copyright © 2017 Elsevier B.V. All rights reserved.

  13. Effects of iron(III)chelates on the solubility of heavy metals in calcareous soils

    Energy Technology Data Exchange (ETDEWEB)

    Ylivainio, Kari, E-mail: kari.ylivainio@mtt.f [Department of Applied Chemistry and Microbiology, FIN-00014 University of Helsinki (Finland)

    2010-10-15

    In this study I evaluated the effects of complexing agents on the solubility of heavy metals in an incubation experiment up to 56 days when complexing agents were applied as Fe-chelates (Fe-EDDS(S,S), Fe-EDDS(mix), Fe-EDTA and Fe-EDDHA) on calcareous soils at a level sufficient to correct Fe chlorosis (0.1 mmol kg{sup -1}). Of these ligands, EDDHA was the most efficient in keeping Fe in water-soluble form, and EDDS increased the solubility of Cu and Zn most, and only EDTA increased the solubility of Cd and Pb. EDTA increased the solubility of Ni steadily during the incubation period, equalling about 5-8% of the added EDTA concentration. [S,S]-EDDS was biodegraded within 56 days, whereas EDDS(mix) was less biodegradable. Ni-chelates were the most recalcitrant against biodegradation. The study shows that even a moderate input of chelates to soil increases the solubility of toxic heavy metals and their risk of leaching. - When correcting Fe chlorosis Fe-EDDS causes lower environmental concern than Fe-EDTA.

  14. Effects of iron(III)chelates on the solubility of heavy metals in calcareous soils

    International Nuclear Information System (INIS)

    Ylivainio, Kari

    2010-01-01

    In this study I evaluated the effects of complexing agents on the solubility of heavy metals in an incubation experiment up to 56 days when complexing agents were applied as Fe-chelates (Fe-EDDS(S,S), Fe-EDDS(mix), Fe-EDTA and Fe-EDDHA) on calcareous soils at a level sufficient to correct Fe chlorosis (0.1 mmol kg -1 ). Of these ligands, EDDHA was the most efficient in keeping Fe in water-soluble form, and EDDS increased the solubility of Cu and Zn most, and only EDTA increased the solubility of Cd and Pb. EDTA increased the solubility of Ni steadily during the incubation period, equalling about 5-8% of the added EDTA concentration. [S,S]-EDDS was biodegraded within 56 days, whereas EDDS(mix) was less biodegradable. Ni-chelates were the most recalcitrant against biodegradation. The study shows that even a moderate input of chelates to soil increases the solubility of toxic heavy metals and their risk of leaching. - When correcting Fe chlorosis Fe-EDDS causes lower environmental concern than Fe-EDTA.

  15. Effects of iron(III)chelates on the solubility of heavy metals in calcareous soils.

    Science.gov (United States)

    Ylivainio, Kari

    2010-10-01

    In this study I evaluated the effects of complexing agents on the solubility of heavy metals in an incubation experiment up to 56 days when complexing agents were applied as Fe-chelates (Fe-EDDS(S,S), Fe-EDDS(mix), Fe-EDTA and Fe-EDDHA) on calcareous soils at a level sufficient to correct Fe chlorosis (0.1 mmol kg(-1)). Of these ligands, EDDHA was the most efficient in keeping Fe in water-soluble form, and EDDS increased the solubility of Cu and Zn most, and only EDTA increased the solubility of Cd and Pb. EDTA increased the solubility of Ni steadily during the incubation period, equalling about 5-8% of the added EDTA concentration. [S,S]-EDDS was biodegraded within 56 days, whereas EDDS(mix) was less biodegradable. Ni-chelates were the most recalcitrant against biodegradation. The study shows that even a moderate input of chelates to soil increases the solubility of toxic heavy metals and their risk of leaching. Copyright (c) 2010 Elsevier Ltd. All rights reserved.

  16. Inorganic Phosphorus Fractions and Their Relationships with Soil Characteristics of Selected Calcareous Soils of Fars Province

    Directory of Open Access Journals (Sweden)

    abolfazl azadi

    2017-01-01

    Full Text Available Introduction: Phosphorus (P is the second limiting nutrient in soils for crop production after nitrogen. Phosphorus is an essential nutrient in crop production. Determination of forms of soil phosphorus is important in the evaluation of soil phosphorus status. Various sequential P fractionation procedures have been used to identify the forms of P and to determine the distribution of P fractions in soils (Chang and Jackson, 1957, Williams et al., 1967; Hedley et al., 1982, but are not particularly sensitive to the various P compounds that may exist in calcareous soils. A Sequential fractionation scheme has been suggested for calcareous soils by which three types of Ca-phosphates i.e. dicalcium phosphate, octacalcium phosphate, and apatite could be identified (Jiang and Gu, 1989. These types of Ca-phosphates were described as Ca2-P (NaHCO3-extractable P, Ca8-P (NH4AC-extractable P and Ca10-P (apatite type, respectively. In this study, the amount and distribution of soil inorganic phosphorus fractions were examined in 49 soil samples of Fars province according to the method described by Jiang and Gu (1989. Materials and Methods: Based on the previous soil survey maps of Fars province and According to Soil Moisture and Temperature Regime Map of Iran (Banaei, 1998, three regions (abadeh, eghlid and noorabad with different Soil Moisture and Temperature Regimes were selected. The soils were comprised Aridic, xeric, and ustic moisture regimes along with mesic, and hyperthemic temperature regimes. 49 representative samples were selected. The soil samples were air-dried and were passed through a 2-mm sieve before analysis. Particle size distribution was determined by hydrometer method (Gee and Bauder 1996. Also, Cation exchange capacity (CEC; Sumner and Miller 1996, calcium carbonate equivalent (Loeppert and Suarez 1996, organic matter content (Nelson and Sommers 1996, and pH by saturated paste method (Thomas 1996 were determined . Inorganic phosphorus

  17. Structural complexity at and around the Triassic-Jurassic GSSP at Kuhjoch, Northern Calcareous Alps, Austria

    Science.gov (United States)

    Palotai, M.; Pálfy, J.; Sasvári, Á.

    2017-10-01

    One of the key requirements for a Global Stratotype Section and Point (GSSP) is the absence of tectonic disturbance. The GSSP for the Triassic-Jurassic system boundary was recently defined at Kuhjoch, Northern Calcareous Alps, Austria. New field observations in the area of the Triassic-Jurassic boundary GSSP site demonstrate that the overturned, tight, and almost upright Karwendel syncline was formed at semibrittle deformation conditions, confirmed by axial planar foliation. Tight to isoclinal folds at various scales were related to a tectonic transport to the north. Brittle faulting occurred before and after folding as confirmed by tilt tests (the rotation of structural data by the average bedding). Foliation is ubiquitous in the incompetent units, including the Kendlbach Formation at the GSSP. A reverse fault (inferred to be formed as a normal fault before folding) crosscuts the GSSP sections, results in the partial tectonic omission of the Schattwald Beds, and thus makes it impossible to measure a complete and continuous stratigraphic section across the whole Kendlbach Formation. Based on these observations, the Kuhjoch sections do not fulfil the specific requirement for a GSSP regarding the absence of tectonic disturbances near boundary level.

  18. Distributions of carbon in calcareous soils under different land uses in western Iran

    Directory of Open Access Journals (Sweden)

    H. Sepahvand

    2016-10-01

    Full Text Available Concentrations of Natural stable and unstable carbon in ecosystems have been used extensively to help to understand a wide range of soil processes and functions. This study was conducted to explore the effects of land use changes on different carbon fractions (F1, F2, F3 and F4, permanganate oxidizable carbon (POXC, soil organic carbon (SOC and total organic carbon (TOC associated with soils in calcareous soils of western Iran. Four popular land uses in the selected site including natural forest, range land, dryland farming and irrigated farming systems were employed as the basis of soil sampling. The results showed a strong relationship between land use conversion and SOC stocks changes. The greatest mean values for carbon content and the least mean values of CaCO3 in bulk topsoil (0–15 cm in the forest land were observed. Dryland farming had the least both active and passive pools of C in comparison with the other land uses. The positive and significant correlations was observed between SOC, Total C and POXC contents and different C fractions. Taking C and POXC pools into account, a more definitive picture of the soil C is obtained than when only total C is measured. The influence of land use changes on overall soil carbon stocks could be helpful for making management decision for farmers and policy makers in the future, for enhancing the potential of C sequestration in western Iran.

  19. The impact of oscillating redox conditions: Arsenic immobilisation in contaminated calcareous floodplain soils

    International Nuclear Information System (INIS)

    Parsons, Christopher T.; Couture, Raoul-Marie; Omoregie, Enoma O.; Bardelli, Fabrizio; Greneche, Jean-Marc; Roman-Ross, Gabriela; Charlet, Laurent

    2013-01-01

    Arsenic contamination of floodplain soils is extensive and additional fresh arsenic inputs to the pedosphere from human activities are ongoing. We investigate the cumulative effects of repetitive soil redox cycles, which occur naturally during flooding and draining, on a calcareous fluvisol, the native microbial community and arsenic mobility following a simulated contamination event. We show through bioreactor experiments, spectroscopic techniques and modelling that repetitive redox cycling can decrease arsenic mobility during reducing conditions by up to 45%. Phylogenetic and functional analyses of the microbial community indicate that iron cycling is a key driver of observed changes to solution chemistry. We discuss probable mechanisms responsible for the arsenic immobilisation observed in-situ. The proposed mechanisms include, decreased heterotrophic iron reduction due to the depletion of labile particulate organic matter (POM), increases to the proportion of co-precipitated vs. aqueous or sorbed arsenic with α-FeOOH/Fe(OH) 3 and potential precipitation of amorphous ferric arsenate. Highlights: •Oscillating redox conditions and heterotrophic metabolism are implemented in PHREEQC. •Depletion of labile organic matter limits iron reduction and arsenic release. •Amorphous FeAsO 4 ∙2H 2 O precipitation potentially limits arsenic mobility during redox cycling. •Water fluctuating zones may naturally attenuate arsenic liberation during flooding. -- We demonstrate through batch experiments, spectroscopy and modelling that repetitive cycles of oxidation and reduction decrease arsenic mobility in soils during subsequent reducing conditions

  20. Relationships between nutrient composition of flowers and fruit quality in orange trees grown in calcareous soil.

    Science.gov (United States)

    Pestana, Maribela; Beja, Pedro; Correia, Pedro José; de Varennes, Amarilis; Faria, Eugénio Araújo

    2005-06-01

    To determine if flower nutrient composition can be used to predict fruit quality, a field experiment was conducted over three seasons (1996-1999) in a commercial orange orchard (Citrus sinensis (L.) Osbeck cv. 'Valencia Late', budded on Troyer citrange rootstock) established on a calcareous soil in southern Portugal. Flowers were collected from 20 trees during full bloom in April and their nutrient composition determined, and fruits were harvested the following March and their quality evaluated. Patterns of covariation in flower nutrient concentrations and in fruit quality variables were evaluated by principal component analysis. Regression models relating fruit quality variables to flower nutrient composition were developed by stepwise selection procedures. The predictive power of the regression models was evaluated with an independent data set. Nutrient composition of flowers at full bloom could be used to predict the fruit quality variables fresh fruit mass and maturation index in the following year. Magnesium, Ca and Zn concentrations measured in flowers were related to fruit fresh mass estimations and N, P, Mg and Fe concentrations were related to fruit maturation index. We also established reference values for the nutrient composition of flowers based on measurements made in trees that produced large (> 76 mm in diameter) fruit.

  1. The use of point load test for Dubai weak calcareous sandstones

    Directory of Open Access Journals (Sweden)

    Amr Farouk Elhakim

    2015-08-01

    Full Text Available Intact rock is typically described according to its uniaxial compressive strength (UCS. The UCS is needed in the design of geotechnical engineering problems including stability of rock slopes and design of shallow and deep foundations resting on and/or in rocks. Accordingly, a correct measurement/evaluation of the UCS is essential to a safe and economic design. Typically, the UCS is measured using the unconfined compression tests performed on cylindrical intact specimens with a minimum length to width ratio of 2. In several cases, especially for weak and very weak rocks, it is not possible to extract intact specimens with the needed minimum dimensions. Thus, alternative tests (e.g. point load test, Schmidt hammer are used to measure rock strength. The UCS is computed based on the results of these tests through empirical correlations. The literature includes a plethora of these correlations that vary widely in estimating rock strength. Thus, it is paramount to validate these correlations to check their suitability for estimating rock strength for a specific location and geology. A review of the available correlations used to estimate the UCS from the point load test results is performed and summarized herein. Results of UCS, point load strength index and Young's modulus are gathered for calcareous sandstone specimens extracted from the Dubai area. A correlation for estimating the UCS from the point load strength index is proposed. Furthermore, the Young's modulus is correlated to the UCS.

  2. Dilatant shear band formation and diagenesis in calcareous, arkosic sandstones, Vienna Basin (Austria)

    Science.gov (United States)

    Lommatzsch, Marco; Exner, Ulrike; Gier, Susanne; Grasemann, Bernhard

    2015-01-01

    The present study examines deformation bands in calcareous arkosic sands. The investigated units can be considered as an equivalent to the Matzen field in the Vienna Basin (Austria), which is one of the most productive oil reservoirs in central Europe. The outcrop exposes carbonate-free and carbonatic sediments of Badenian age separated by a normal fault. Carbonatic sediments in the hanging wall of the normal fault develop dilation bands with minor shear displacements (< 2 mm), whereas carbonate-free sediments in the footwall develop cataclastic shear bands with up to 70 cm displacement. The cataclastic shear bands show a permeability reduction up to 3 orders of magnitude and strong baffling effects in the vadose zone. Carbonatic dilation bands show a permeability reduction of 1-2 orders of magnitude and no baffling structures. We distinguished two types of deformation bands in the carbonatic units, which differ in deformation mechanisms, distribution and composition. Full-cemented bands form as dilation bands with an intense syn-kinematic calcite cementation, whereas the younger loose-cemented bands are dilatant shear bands cemented by patchy calcite and clay minerals. All analyzed bands are characterized by a porosity and permeability reduction caused by grain fracturing and cementation. The changed petrophysical properties and especially the porosity evolution are closely related to diagenetic processes driven by varying pore fluids in different diagenetic environments. The deformation band evolution and sealing capacity is controlled by the initial host rock composition. PMID:26300577

  3. Bacteria transport and retention in intact calcareous soil columns under saturated flow conditions

    Directory of Open Access Journals (Sweden)

    Farrokhian Firouzi Ahmad

    2015-06-01

    Full Text Available Study of bacterial transport and retention in soil is important for various environmental applications such as groundwater contamination and bioremediation of soil and water. The main objective of this research was to quantitatively assess bacterial transport and deposition under saturated conditions in calcareous soil. A series of leaching experiments was conducted on two undisturbed soil columns. Breakthrough curves of Pseudomonas fluorescens and Cl were measured. After the leaching experiment, spatial distribution of bacteria retention in the soil columns was determined. The HYDRUS-1D one- and two-site kinetic models were used to predict the transport and deposition of bacteria in soil. The results indicated that the two-site model fits the observed data better than one-site kinetic model. Bacteria interaction with the soil of kinetic site 1 revealed relatively fast attachment and slow detachment, whereas attachment to and detachment of bacteria from kinetic site 2 was fast. Fast attachment and slow detachment of site 1 can be attributed to soil calcium carbonate that has favorable attachment sites for bacteria. The detachment rate was less than 0.02 of the attachment rate, indicating irreversible attachment of bacteria. High reduction rate of bacteria was also attributed to soil calcium carbonate.

  4. Potential of Brassic rapa, Cannabis sativa, Helianthus annuus and Zea mays for phytoextraction of heavy metals from calcareous dredged sediment derived soils.

    Science.gov (United States)

    Meers, E; Ruttens, A; Hopgood, M; Lesage, E; Tack, F M G

    2005-10-01

    Remediation of soil pollution is one of the many current environmental challenges. Anthropogenic activity has resulted in the contamination of extended areas of land, the remediation of which is both invasive and expensive by conventional means. Phytoextraction of heavy metals from contaminated soils has the prospect of being a more economic in situ alternative. In addition, phytoextraction targets ecotoxicologically the most relevant soil fraction of these metals, i.e. the bioavailable fraction. Greenhouse experiments were carried out to evaluate the potential of four high biomass crop species in their potential for phytoextraction of heavy metals, with or without with the use of soil amendments (EDTA or EDDS). A calcareous dredged sediment derived surface soil, with high organic matter and clay content and moderate levels of heavy metal pollution, was used in the experiments. No growth depression was observed in EDTA or EDDS treated pots in comparison to untreated controls. Metal accumulation was considered to be low for phytoextraction purposes, despite the use of chelating agents. The low observed shoot concentrations of heavy metals were attributed to the low phytoavailability of heavy metals in this particular soil substrate. The mobilising effects induced by EDTA in the soil were found to be too long-lived for application as a soil amendment in phytoextraction. Although EDDS was found to be more biodegradable, higher effect half lives were observed than reported in literature or observed in previous experiments. These findings caution against the use of any amendment, biodegradable or otherwise, without proper investigation of its effects and the longevity thereof.

  5. Kinetics of bacterial fluorescence staining with 3,3'-diethylthiacyanine.

    Science.gov (United States)

    Thomas, Marlon S; Nuñez, Vicente; Upadhyayula, Srigokul; Zielins, Elizabeth R; Bao, Duoduo; Vasquez, Jacob M; Bahmani, Baharak; Vullev, Valentine I

    2010-06-15

    For more than a century, colorimetric and fluorescence staining have been the foundation of a broad range of key bioanalytical techniques. The dynamics of such staining processes, however, still remains largely unexplored. We investigated the kinetics of fluorescence staining of two gram-negative and two gram-positive species with 3,3'-diethylthiacyanine (THIA) iodide. An increase in the THIA fluorescence quantum yield, induced by the bacterial dye uptake, was the principal reason for the observed emission enhancement. The fluorescence quantum yield of THIA depended on the media viscosity and not on the media polarity, which suggested that the microenvironment of the dye molecules taken up by the cells was restrictive. The kinetics of fluorescence staining did not manifest a statistically significant dependence neither on the dye concentration, nor on the cell count. In the presence of surfactant additives, however, the fluorescence-enhancement kinetic patterns manifested species specificity with statistically significant discernibility.

  6. Acetylcholinesterase and Nissl staining in the same histological section.

    Science.gov (United States)

    Shipley, M T; Ennis, M; Behbehani, M M

    1989-12-18

    Acetylcholinesterase (AChE) enzyme histochemistry and Nissl staining are commonly utilized in neural architectonic studies. However, the opaque reaction deposit produced by the most commonly used AChE histochemical methods is not compatible with satisfactory Nissl staining. As a result, precise correlation of AChE and Nissl staining necessitates time-consuming comparisons of adjacent sections which may have differential shrinkage. Here, we have modified the Koelle-Friedenwald histochemical reaction for AChE by omitting the final intensification steps. The modified reaction yields a non-opaque reaction product that is selectively visualized by darkfield illumination. This non-intensified darkfield AChE (NIDA) reaction allows clear visualization of Nissl staining in the same histological section. This combined AChE-Nissl method greatly facilitates detailed correlation of enzyme and cytoarchitectonic organization.

  7. Microscopic analysis of MTT stained boar sperm cells

    African Journals Online (AJOL)

    tulyasys

    2015-06-08

    2H-tetrazolium bromide is widely used for assessment of cytotoxicity, cell viability, and proliferation studies in cell biology (van Meerloo et al., 2011;. Stockert et al., 2012). The stain is abbreviated as MTT.

  8. Measurement of neuron soma size by fluorescent Nissl stain

    OpenAIRE

    sprotocols

    2015-01-01

    Authors: James Cronk, Noel Derecki & Jonathan Kipnis ### Abstract This protocol describes how to measure neuron soma size by fluorescent Nissl stain. Mice are sacrificed, and fixed by PFA perfusion. Brains are removed, and further PFA fixed, followed by sucrose cryoprotection. They are then snap frozen, sliced by cryostat, and stained with fluorescent Nissl as floating sections. Confocal microscopy is used to take images of neurons, and a computer graphics tablet is used to calculate ...

  9. Gram staining for the treatment of peritonsillar abscess.

    Science.gov (United States)

    Takenaka, Yukinori; Takeda, Kazuya; Yoshii, Tadashi; Hashimoto, Michiko; Inohara, Hidenori

    2012-01-01

    Objective. To examine whether Gram staining can influence the choice of antibiotic for the treatment of peritonsillar abscess. Methods. Between 2005 and 2009, a total of 57 cases of peritonsillar abscess were analyzed with regard to cultured bacteria and Gram staining. Results. Only aerobes were cultured in 16% of cases, and only anaerobes were cultured in 51% of cases. Mixed growth of aerobes and anaerobes was observed in 21% of cases. The cultured bacteria were mainly aerobic Streptococcus, anaerobic Gram-positive cocci, and anaerobic Gram-negative rods. Phagocytosis of bacteria on Gram staining was observed in 9 cases. The bacteria cultured from these cases were aerobic Streptococcus, anaerobic Gram-positive cocci, and anaerobic Gram-negative rods. The sensitivity of Gram staining for the Gram-positive cocci and Gram-negative rods was 90% and 64%, respectively. The specificity of Gram staining for the Gram-positive cocci and Gram-negative rods was 62% and 76%, respectively. Most of the Gram-positive cocci were sensitive to penicillin, but some of anaerobic Gram-negative rods were resistant to penicillin. Conclusion. When Gram staining shows only Gram-positive cocci, penicillin is the treatment of choice. In other cases, antibiotics effective for the penicillin-resistant organisms should be used.

  10. An improved method for staining cell colonies in clonogenic assays.

    Science.gov (United States)

    Guda, Kishore; Natale, Leanna; Markowitz, Sanford D

    2007-06-01

    Clonogenic assay is a widely used experimental approach to test for the effects of drugs/genes on the growth and proliferative characteristics of cells in vitro. Accurate quantitation of treatment effects in clonogeneic assays depends on the ability to visualize and count cell colonies precisely. We report a novel method (referred as ETeB) for staining cell colonies grown on plastic and specially coated substrates like collagen. Using colon cancer cell lines grown on plastic and collagen, we compared the colony staining efficiencies of the widely used methylene blue, and Ethidium bromide (ETeB) stains. Results show that the ETeB protocol works well on plastic and is extremely effective for staining colonies on collagen when compared to methylene blue. The key features and advantages of ETeB technique are; (a) reduction in background for colonies grown on collagen and possibly other substrates, (b) the whole procedure takes less than a minute, (c) no post-stain washing step is required which eliminates colony losses for cell lines that are loosely adherent, (d) colony visualization and counting can be done immediately following the staining procedure using a standard UV illuminator and software, and (e) the method works across a wide variety of cell lines. The simplicity and robustness of this procedure should warrant its usage in both small and large-scale clonogenic experiments.

  11. MANAJEMEN SARANA DAN PRASARANA PENDIDIKAN DI STAIN PAMEKASAN

    Directory of Open Access Journals (Sweden)

    M. Muchlis Solichin

    2011-07-01

    Full Text Available Mediums management and pre-mediums represent an absolute done in an higher education institute, because Mediums and premediums in education management represent the absolut condition in the effort to reach the target which is expected. Thereby, Every the education organizer have to pay attention and conscripting the mind and energy to carry out education management that is professional and fulfill Standard National Education ( SNP. This Research copes to comprehend the mediums and pre-mediums management of education in STAIN Pamekasan, because during this time of mediums and basic mediums management are not yet showing its idealitas. This research is focussed at; a How mediums and pre-mediums menegement in STAIN Pamekasan ?,and b what Factors influencing mediums and pre-mediums management in STAIN Pamekasan ?. This research uses the qualitative type by using observation, interview, and documentation method. Based the rearch done, to be expressed that the first of STAIN Pamekasan conduct mediums and pre-mediums manegement still have the centralization character of top down, either in the case of planning, organizational, observation, and assessment of mediums and pre-mediums management owned, second in some cases of STAIN Pamekasan do not yet manage the mediums and pre-mediums management because they are caused by factor is its lack of management professionalism, either when doing the planning, organizational, treatment and observation or evaluation. Based the matter above, hence, suggested that STAIN Pamekasan carry out the mediums and pre-mediums management of education professionally.

  12. The effects of ozone and NOx on the deterioration of calcareous stone

    International Nuclear Information System (INIS)

    Massey, S.W.

    1999-01-01

    This paper looks at the changes in urban air quality and the effect on building materials with particular regard to their deterioration arising from pollution due to vehicles. The paper aims to review basic information on the likely effect of NO x and ozone on calcareous building materials (limestone, marble, dolomite, calcareous cemented sandstone) by examining experimental and fieldwork relating to the principle reaction of the oxidation of the sulphite to sulphate. NO 2 is only one of many possible oxidants present in the urban and rural environment. A brief synopsis of the effects of other oxidants and inhibitors is given along with a review of the processes involved in aqueous phase oxidation, which seems to be the phase where the reactions take place. Controlling factors in the reaction and oxidation of sulphite to sulphate are the type and porosity of the stone, the level of humidity, the nature of the oxidants and to a lesser extent the presence of other extraneous reactants, e.g. metal oxides, chlorine and ammonia salts. For freshly cut stone unpolished marble is much less reactive than porous limestone and the degree of activity has different relative humidity thresholds. Reaction of the stone with the gaseous compounds occurs during the process of absorption onto the surface. The oxidation is accelerated at the gas-water interface by the presence of NO x , and seems to depend on the NO 2 component but it is clear that NO x is only one of many possible oxidants in the urban and rural environments. Correlation studies of the damage to stone materials are unlikely to pick up the effects of NO x due to the nature of their duration and the rather transient nature of the appearance and removal of nitrates on the stone. Presence of other oxidants and catalysts such as H 2 O 2 , O 2 (catalysed by Fe 3+ and Mn 2+ ), OH, HSO 5 - , SO 4 2- , O 3 , HO 2 , NO 2 - , NO 3 , O 2 - and PAN, plus the fact that the reactions are pH and ionic strength sensitive, add greatly

  13. The effects of ozone and NO{sub x} on the deterioration of calcareous stone

    Energy Technology Data Exchange (ETDEWEB)

    Massey, S.W. [Building Research Establishment Ltd, Garston, Watford (United Kingdom)

    1999-03-09

    This paper looks at the changes in urban air quality and the effect on building materials with particular regard to their deterioration arising from pollution due to vehicles. The paper aims to review basic information on the likely effect of NO{sub x} and ozone on calcareous building materials (limestone, marble, dolomite, calcareous cemented sandstone) by examining experimental and fieldwork relating to the principle reaction of the oxidation of the sulphite to sulphate. NO{sub 2} is only one of many possible oxidants present in the urban and rural environment. A brief synopsis of the effects of other oxidants and inhibitors is given along with a review of the processes involved in aqueous phase oxidation, which seems to be the phase where the reactions take place. Controlling factors in the reaction and oxidation of sulphite to sulphate are the type and porosity of the stone, the level of humidity, the nature of the oxidants and to a lesser extent the presence of other extraneous reactants, e.g. metal oxides, chlorine and ammonia salts. For freshly cut stone unpolished marble is much less reactive than porous limestone and the degree of activity has different relative humidity thresholds. Reaction of the stone with the gaseous compounds occurs during the process of absorption onto the surface. The oxidation is accelerated at the gas-water interface by the presence of NO{sub x}, and seems to depend on the NO{sub 2} component but it is clear that NO{sub x} is only one of many possible oxidants in the urban and rural environments. Correlation studies of the damage to stone materials are unlikely to pick up the effects of NO{sub x} due to the nature of their duration and the rather transient nature of the appearance and removal of nitrates on the stone. Presence of other oxidants and catalysts such as H{sub 2}O{sub 2}, O{sub 2} (catalysed by Fe{sup 3+} and Mn{sup 2+}), OH, HSO{sub 5}{sup -}, SO{sub 4}{sup 2-}, O{sub 3}, HO{sub 2}, NO{sub 2}{sup -}, NO{sub 3}, O

  14. The effects of ozone and NO{sub x} on the deterioration of calcareous stone

    Energy Technology Data Exchange (ETDEWEB)

    Massey, S.W. [Building Research Establishment Ltd., Garston, Watford (United Kingdom)

    1999-03-09

    This paper looks at the changes in urban air quality and the effect on building materials with particular regard to their deterioration arising from pollution due to vehicles. The paper aims to review basic information on the likely effect of NO{sub x} and ozone on calcareous building materials (limestone, marble, dolomite, calcareous cemented sandstone) by examining experimental and fieldwork relating to the principle reaction of the oxidation of the sulphite to sulphate. NO{sub 2} is only one of many possible oxidants present in the urban and rural environment. A brief synopsis of the effects of other oxidants and inhibitors is given along with a review of the processes involved in aqueous phase oxidation, which seems to be the phase where the reactions take place. Controlling factors in the reaction and oxidation of sulphite to sulphate are the type and porosity of the stone, the level of humidity, the nature of the oxidants and to a lesser extent the presence of other extraneous reactants, e.g. metal oxides, chlorine and ammonia salts. For freshly cut stone unpolished marble is much less reactive than porous limestone and the degree of activity has different relative humidity thresholds. Reaction of the stone with the gaseous compounds occurs during the process of absorption onto the surface. The oxidation is accelerated at the gas-water interface by the presence of NO{sub x}, and seems to depend on the NO{sub 2} component but it is clear that NO{sub x} is only one of many possible oxidants in the urban and rural environments. Correlation studies of the damage to stone materials are unlikely to pick up the effects of NO{sub x} due to the nature of their duration and the rather transient nature of the appearance and removal of nitrates on the stone. Presence of other oxidants and catalysts such as H{sub 2}O{sub 2}, O{sub 2} (catalysed by Fe{sup 3+} and Mn{sup 2+}), OH, HSO{sub 5}{sup -}, SO{sub 4}{sup 2-}, O{sub 3}, HO{sub 2}, NO{sub 2}{sup -}, NO{sub 3}, O

  15. Spatial Variability and Geostatistical Prediction of Some Soil Hydraulic Coefficients of a Calcareous Soil

    Directory of Open Access Journals (Sweden)

    Ali Akbar Moosavi

    2017-02-01

    Full Text Available Introduction: Saturated hydraulic conductivity and the other hydraulic properties of soils are essential vital soil attributes that play role in the modeling of hydrological phenomena, designing irrigation-drainage systems, transportation of salts and chemical and biological pollutants within the soil. Measurement of these hydraulic properties needs some special instruments, expert technician, and are time consuming and expensive and due to their high temporal and spatial variability, a large number of measurements are needed. Nowadays, prediction of these attributes using the readily available soil data using pedotransfer functions or using the limited measurement with applying the geostatistical approaches has been receiving high attention. The study aimed to determine the spatial variability and prediction of saturated (Ks and near saturated (Kfs hydraulic conductivity, the power of Gardner equation (α, sorptivity (S, hydraulic diffusivity (D and matric flux potential (Фm of a calcareous soil. Material and Methods: The study was carried out on the soil series of Daneshkadeh located in the Bajgah Agricultural Experimental Station of Agricultural College, Shiraz University, Shiraz, Iran (1852 m above the mean sea level. This soil series with about 745 ha is a deep yellowish brow calcareous soil with textural classes of loam to clay. In the studied soil series 50 sampling locations with the sampling distances of 16, 8 , and 4 m were selected on the relatively regular sampling design. The saturated hydraulic conductivity (Ks, near saturated hydraulic conductivity (Kfs, the power of Gardner equation (α, sorptivity (S, hydraulic diffusivity (D and matric flux potential (Фm of the aforementioned sampling locations was determined using the Single Ring and Droplet methods. After, initial statistical processing, including a normality test of data, trend and stationary analysis of data, the semivariograms of each studied hydraulic attributes were

  16. Paleoclimate and paleoecology of the mid Cretaceous traced by calcareous nannofossils

    Science.gov (United States)

    Bottini, Cinzia; Erba, Elisabetta

    2016-04-01

    The Aptian - early Turonian time interval was marked by major environmental changes at regional to global scale. Specifically, it was a time of super-greenhouse conditions and the climate-ocean system experienced phases of stability perturbed by transient, sometimes prolonged, anomalies of the global carbon cycle. Several regional to global episodes occurred over this time interval: the early Aptian Oceanic Anoxic Event (OAE) 1a, the early Albian OAE 1b, the latest Albian OAE 1d, the Mid-Cenomanian Event (MCE I) and the Cenomanian - Turonian OAE 2. Decades of multidisciplinary research focused on OAEs since they constitute ideal case-histories for the understanding of our planet functioning during perturbations of the C cycle. They were, in fact, characterized by excess CO2, intense volcanism, and altered climate and oceanic chemistry. A useful tool for reconstructing the marine ecosystem dynamics of the past, is calcareous nannoplankton, since it is extremely sensitive to changes in surface waters parameters like temperature and nutrient content and interacts with the C cycle through biological processes and production of calcareous oozes. Here, we gathered new quantitative nannofossil data for the Tethys Ocean (Umbria Marche Basin, Italy) to derive climatic fluctuations and changes in ocean fertility during the late Albian - early Turonian. Over this time interval, the Tethys Ocean was characterized by phases of rhythmic black shale deposition controlled by orbital forcing. The Pialli Level is the Tethyan sedimentary expression of the latest Albian OAE 1d, characterized by large-scale occurrence of black shales and a δ13C positive excursion recognized in several deep-marine settings. The other prominent δ13C anomaly coincides with the OAE 2 represented, in Italy, by the Bonarelli Level. Between these two main C-isotopic excursions, a double-spiked minor anomaly identifies the MCE I, lithologically represented by a shift to black shales and black chert bands

  17. Phosphorus status and sorption characteristics of some calcareous soils of Hamadan, western Iran

    Science.gov (United States)

    Jalali, Mohsen

    2007-10-01

    Phosphorus (P) application in excess of plant requirement may result in contamination of drinking water and eutrophication of surface water bodies. The phosphorous buffer capacity (PBC) of soil is important in plant nutrition and is an important soil property in the determination of the P release potential of soils. Phosphorus sorption greatly affects both plant nutrition and environmental pollution. For better and accurate P fertilizer recommendations, it is necessary to quantify P sorption. This study was conducted to investigate available P and P sorption by calcareous soils in a semi-arid region of Hamadan, western Iran. The soil samples were mainly from cultivated land. Olsen’s biocarbonate extractable P (Olsen P) varied among soils and ranged from 10 to 80 mg kg-1 with a mean of 36 mg kg-1. Half of the soils had an Olsen P > 40 mg kg-1 and >70% of them had a concentration >20 mg kg-1, whereas the critical concentration for most crops is potato (44 kg kg-1) fields than in dry-land wheat farming (24 mg kg-1), pasture (30 mg kg-1), and wheat (24 mg P kg-1) fields. A marked increase in fertilizer P rates applied to agricultural soils has caused P to be accumulated in the surface soil. Phosphate sorption curves were well fitted to the Freundlich equation. The standard P requirement (SPR) of soils, defined as the amount of P sorbed at an equilibrium concentration of 0.2 mg l-1 ranged from 4 to 102 mg kg-1. Phosphorus buffer capacity was relatively high and varied from 16 to 123 l kg-1 with an average of 58 l kg-1. In areas of intensive crop production, continual P applications as P fertilizer and farmyard manure have been used at levels exceeding crop requirements. Surface soil accumulations of P are high enough that loss of P in surface runoff and a high risk for P transfer into groundwater have become priority management concerns.

  18. Intrinsic Problems In Determination Of Soil Texture In Calcareous Soils Of Arid Zones

    Directory of Open Access Journals (Sweden)

    Mozna A. Ahmed

    2017-08-01

    Full Text Available This study aimed at studying the effect of removal of CaCO3 on the texture of the soil profile and that of the control section in some Aridisols of the Sudan. Sixty soil profiles were sampled from Shendi area latitude1636 and longitude 33 48 River Nile State Sudan. These soils were analyzed for CaCO3 and 20 of these profiles were found to be of relatively appreciable calcareousness and were therefore selected for this study. The following three weighted soil textures were determined 1 before any removal of the CaCO3 Texture1 2 after the removal of CaCO3 Texture2 3 after amending the texture by adding the clay sized CaCO3 to the silt fraction Texture 3. Statistical analysis revealed significant differences among soil separates in the three textures except between clay of T2 and clay of T3 and among sand fractions in the three textures. That was not unexpected because the first texture included both mineral separates plus their equivalent size of CaCO3 the second texture included only the mineral separates in complete absence of CaCO3 while texture 3 was an amended texture. The change in the textural class amounted to 72 of the profiles. Statistical analysis in the weighted texture of the control section revealed that this texture was not affected except in two profiles. That could be attributed to the fact that the clay content of the soils of the study area did not fall at or near the boundary between any two major textural classes used in the Soil Taxonomy. The size of the CaCO3 was found in the order of clay size silt size sand size.

  19. Molecular phylogenetic evaluation of classification and scenarios of character evolution in calcareous sponges (Porifera, Class Calcarea.

    Directory of Open Access Journals (Sweden)

    Oliver Voigt

    Full Text Available Calcareous sponges (Phylum Porifera, Class Calcarea are known to be taxonomically difficult. Previous molecular studies have revealed many discrepancies between classically recognized taxa and the observed relationships at the order, family and genus levels; these inconsistencies question underlying hypotheses regarding the evolution of certain morphological characters. Therefore, we extended the available taxa and character set by sequencing the complete small subunit (SSU rDNA and the almost complete large subunit (LSU rDNA of additional key species and complemented this dataset by substantially increasing the length of available LSU sequences. Phylogenetic analyses provided new hypotheses about the relationships of Calcarea and about the evolution of certain morphological characters. We tested our phylogeny against competing phylogenetic hypotheses presented by previous classification systems. Our data reject the current order-level classification by again finding non-monophyletic Leucosolenida, Clathrinida and Murrayonida. In the subclass Calcinea, we recovered a clade that includes all species with a cortex, which is largely consistent with the previously proposed order Leucettida. Other orders that had been rejected in the current system were not found, but could not be rejected in our tests either. We found several additional families and genera polyphyletic: the families Leucascidae and Leucaltidae and the genus Leucetta in Calcinea, and in Calcaronea the family Amphoriscidae and the genus Ute. Our phylogeny also provided support for the vaguely suspected close relationship of several members of Grantiidae with giantortical diactines to members of Heteropiidae. Similarly, our analyses revealed several unexpected affinities, such as a sister group relationship between Leucettusa (Leucaltidae and Leucettidae and between Leucascandra (Jenkinidae and Sycon carteri (Sycettidae. According to our results, the taxonomy of Calcarea is in

  20. No visible dental staining in children treated with doxycycline for suspected Rocky Mountain Spotted Fever.

    Science.gov (United States)

    Todd, Suzanne R; Dahlgren, F Scott; Traeger, Marc S; Beltrán-Aguilar, Eugenio D; Marianos, Donald W; Hamilton, Charlene; McQuiston, Jennifer H; Regan, Joanna J

    2015-05-01

    To evaluate whether cosmetically relevant dental effects occurred among children who had received doxycycline for treatment of suspected Rocky Mountain spotted fever (RMSF). Children who lived on an American Indian reservation with high incidence of RMSF were classified as exposed or unexposed to doxycycline, based on medical and pharmacy record abstraction. Licensed, trained dentists examined each child's teeth and evaluated visible staining patterns and enamel hypoplasia. Objective tooth color was evaluated with a spectrophotometer. Fifty-eight children who received an average of 1.8 courses of doxycycline before 8 years of age and who now had exposed permanent teeth erupted were compared with 213 children who had never received doxycycline. No tetracycline-like staining was observed in any of the exposed children's teeth (0/58, 95% CI 0%-5%), and no significant difference in tooth shade (P=.20) or hypoplasia (P=1.0) was found between the 2 groups. This study failed to demonstrate dental staining, enamel hypoplasia, or tooth color differences among children who received short-term courses of doxycycline at <8 years of age. Healthcare provider confidence in use of doxycycline for suspected RMSF in children may be improved by modifying the drug's label. Published by Elsevier Inc.

  1. Micronutrient Availability in Relation to Selected Soil Properties and landscape Position in Calcareous Soils of Golpayegan

    Directory of Open Access Journals (Sweden)

    Mojtaba Fathi

    2017-02-01

    Full Text Available Introduction: Variety of soil reactions govern the distribution of metal micronutrients that includes complexation with organic and inorganic ligands, ion exchange, adsorption and desorption processes, precipitation and dissolution of solids and acid-based equilibria. The relative importance of these reactions depends on many factors such as soil physical, chemical, and mineralogical properties and the nature of metal ions. Environmental factors such as climate, physiographic position, and soil development may affect variability of some soil properties and thereby nutrient availability. The present research was conducted to find relationships between Iron, manganese, zinc, and copper availability and some major soil properties, physiographic condition and soil development. Materials and Methods: Golpayegan region is located in northwest of Isfahan province in central Iran. The mean elevation of the studied area is 1790 above sea level. Annual precipitation was about 244mm and mean monthly temperature ranges from -6 in January to 34°C in August. The soils were developed on different physiographic conditions including piedmont plains, alluvial-fan, plateaus, and flood plains belonging to Entisols and Aridisols. Soil samples (0–60 cm were collected from 98 grid points with 2000m distance in the agricultural area of Golpayegan. Particle size distribution, calcium carbonate, organic carbon, available potassium and phosphorus of the soils were measured by SWRI standard methods. Available Zn, Cu, Mn, and Fe were determined by addition of 10 g soil to 20mL 0.005M diethylentriaminepentacetic‏. The solutions were shaken for 2 h at 25°C, centrifuged, filtered, and Fe, Mn, Zn, and Cu concentrations were measured by an atomic absorption spectrophotometer. Results Discussion: Studied soils were developed on calcareous material and about 60% of samples have more than 20% of calcium carbonate. Available Fe ranged from 1.4 to 6.5 mg kg-1 (mean 15.8 mg kg-1

  2. Healthy Living

    Science.gov (United States)

    ... Health Menu Topics Environment & Health Healthy Living Pollution Reduce, Reuse, Recycle Science – How It Works The Natural World Games ... Lessons Topics Expand Environment & Health Healthy Living Pollution Reduce, Reuse, Recycle Science – How It Works The Natural World Games ...

  3. Calcareous nannofossil evidence for Marine Isotope Stage 31 (1 Ma) in the AND-1B Core, ANDRILL McMurdo Ice Shelf Project (Antarctica).

    Science.gov (United States)

    Villa, G.; Persico, D.; Wise, S. W.; Gadaleta, A.

    2009-04-01

    , Thoracosphaera spp.. The presence of several Tertiary reworked species and rare Cretaceous reworked taxa are interpreted in terms of provenance. As the lower temperature limit for living calcareous nannoplankton is about 2.5°C, the presence of nannofossils from 86 to 96 mbsf, though rare, is an indication of ice-free and sea surface temperatures warmer than today, in the Ross Sea. The presence of numerous volcaniclastic units and biosiliceous sediments from 86.6 to 92.5 mbsf indicate an extended period of open-water conditions with no sea ice, beyond the calving line. An 40Ar/39Ar age of 1.014 ± 0.004 Ma on pumice at 85.50 mbsf confirms the age assignment given by diatom biostratigraphy (1.07 Ma) for this interval. Accordingly, the short normal magnetozone between 84.97 and 91.13 mbsf is correlated with the Jaramillo Subchron (C1r.1n) (Wilson et al., 2007). The presence of nannofossil in the biogenic interglacial sediments is consistent with warm episode of surface waters and open marine conditions during the Jaramillo subchron, at ~1 Ma, which corresponds with Marine isotope stage (MIS-31) (Naish et al., 2007). The "superinterglacial" associated with MIS 31 was the last significant warm interglacial of the obliquity-dominated world, and may represent a precursor to the high-amplitude eccentricity-dominated cycles that followed the mid-Pleistocene climate shift. Climate proxies from other studies from the Southern Ocean at ODP Site 1165 (Villa et al., 2008), at ODP Site 1094 (Scherer et al., 2008), and from the Antarctic margin in a shelly carbonate sequence at Cape Roberts 1 (Villa and Wise, 1998; Scherer et al., 2008) also support the idea of a warming event during this time, suggesting that it was extended around the Antarctic Continent. This in turn implies a total or partial collapse of McMurdo Ice Shelf and a concurrent shift or temporary dissipation of the Polar Front (Antarctic Convergence) and Antarctic Divergence that currently serve as barriers to the influx of

  4. Assisted Living

    Science.gov (United States)

    ... it, too. Back to top What is the Cost for Assisted Living? Although assisted living costs less than nursing home ... Primarily, older persons or their families pay the cost of assisted living. Some health and long-term care insurance policies ...

  5. Modified Alizarin Red S-Alcian Blue Staining for Reptilian Skeleton

    Directory of Open Access Journals (Sweden)

    Muhammad Ja’far Luthfi

    2016-04-01

    Full Text Available Skeletal staining is an important method in anatomical study. The aim of the research was to develop staining and clearing method of Reptilian skeleton using Alizarin Red S-Alcian Blue. The specimen were eviscerated, fixed, stained, cleared, and keep in glycerine solution. This modified double-staining has successfully stain bone and cartilage of Reptilian.

  6. Calcareous nannoplankton assemblages across the Pliocene-Pleistocene transition in the southwestern Indian Ocean, IODP Site U1475

    Science.gov (United States)

    Cares, Z.; Farr, C. L.; LeVay, L.; Tangunan, D.; Brentegani, L.

    2017-12-01

    International Ocean Discovery Program (IODP) Expedition 361 cored six sites along the greater Agulhas Current System to track its intensity through time and to better understand its role in global oceanic circulation and climate. One of the main scientific objectives of this expedition was to determine the dynamics of the Indian-Atlantic Ocean Gateway circulation during Pliocene-Pleistocene climate changes in association with changing wind fields and migrating ocean fronts. The Indian-Atlantic Ocean Gateway contains a pronounced oceanic frontal system, the position of which has the potential to influence global climate on millennial scales. Owing to the physical differences between the frontal zones, this region has complex biogeochemistry, changes in phytoplankton distribution, and variations in primary productivity. Site U1475 was cored on the Agulhas Plateau in the Southwestern Indian Ocean and recovered a complete sequence of calcareous ooze spanning the last 7 Ma. Previous studies at this locality have shown latitudinal migrations of the frontal zones over the past 350 kyr that resulted in prominent millennial shifts in primary production, biological pump efficiency, and microfossil assemblages that coincide with Antarctic climate variability. Here we present initial results comprised of calcareous nannoplankton assemblages in order to test if similar latitudinal frontal migrations occurred during the Pliocene-Pleistocene transition (PPT; 2.7 Ma). The calcareous nannoplankton assemblage shows an abundance increase of taxa associated with cooler water and higher primary production across the PPT interval. In addition to a change in species abudance, the Shannon diversity index drops notably across the transition, which is typical of nannoplankton communities in more productive regions. These data suggest that a long-term change in sea surface temperature and nutrient availability took place across the PPT, potentially linked to the northward migration of

  7. [Intrapartum amnioinfusion in patients with meconium-stained amniotic fluid].

    Science.gov (United States)

    Engel, Karina; Samborska, Monika; Bilar, Marek; Sipak-Szmigiel, Olimpia; Ronin-Walknowska, Elzbieta

    2008-09-01

    The aim of the study was to evaluate the effect of intrapartum amnioinfusion in the presence of meconium stained amniotic fluid. 93 women with meconium-stained amniotic fluid were assigned to receive amnioinfusion or no amnioinfusion (128 women). The trials were evaluated for fetal distress syndrome, route of delivery, fetal acidemia, Apgar score at 1 and 5 min., meconium aspiration syndrome, postpartum endometritis and maternal hospital stays. Amnioinfusion in cases of meconium-stained fluid did not improve the number of fetal distress symptoms during fetal heart rate monitoring. Amnioinfusion was associated with a significant decrease of neonatal acidemia although it did not improve Apgar score. In our study amnioinfusion was not associated with reduction in the incidence of neonatal outcome and puerperial complications.

  8. Indocyanine green staining facilitates detection of bleb leakage during trabeculectomy.

    Science.gov (United States)

    Okazaki, Teruhiko; Kiuchi, Takahiro; Kawana, Keisuke; Oshika, Tetsuro

    2007-03-01

    To report a new technique to visualize bleb leakage using indocyanine green (ICG) staining during trabeculectomy. The ICG solution was widely applied over the filtering bleb including the conjunctival wound before completion of trabeculectomy. This procedure was performed in 48 eyes of 44 consecutive patients undergoing trabeculectomy between December 2004 and October 2005. Without staining, bleb leakage was not identified by the direct observation under the operating microscope. ICG staining clearly visualized aqueous leakage from the bleb in 5 eyes (10.4%). The bleb leakage in these eyes was easily repaired with 10-0 nylon sutures, and no eyes, including these 5 cases, showed bleb leakage after surgery. There were no intraoperative and postoperative complications related to ICG application. The application of ICG during trabeculectomy is a simple and useful technique to facilitate detection and repair of the bleb leakage.

  9. MEGARA Optics: stain removal in PBM2Y prisms

    International Nuclear Information System (INIS)

    Aguirre-Aguirre, D; Izazaga-Pérez, R; Carrasco, E; Villalobos-Mendoza, B; De Paz, A Gil; Gallego, J; Iglesias, J

    2017-01-01

    MEGARA is the new integral-field and multi-object optical spectrograph for the GTC. For medium and high resolution, the dispersive elements are volume phase holographic gratings, sandwiched between two flat windows and two prisms of high optical precision. The prisms are made of Ohara PBM2Y optical glass. After the prisms polishing process, some stains appeared on the surfaces. For this, in this work is shown the comparative study of five different products (muriatic acid, paint remover, sodium hydroxide, aqua regia and rare earth liquid polish) used for trying to eliminate the stains of the HR MEGARA prisms. It was found that by polishing with the hands the affected area, and using a towel like a kind of pad, and polish during five minutes using rare earth, the stains disappear completely affecting only a 5% the rms of the surface quality. Not so the use of the other products that did not show any apparent result. (paper)

  10. Chromosome-specific staining to detect genetic rearrangements

    Energy Technology Data Exchange (ETDEWEB)

    Gray, Joe W.; Pinkel, Daniel; Tkachuk, Douglas; Westbrook, Carol

    2013-04-09

    Methods and compositions for staining based upon nucleic acid sequence that employ nucleic acid probes are provided. Said methods produce staining patterns that can be tailored for specific cytogenetic analyzes. Said probes are appropriate for in situ hybridization and stain both interphase and metaphase chromosomal material with reliable signals. The nucleic acid probes are typically of a complexity greater than 50 kb, the complexity depending upon the cytogenetic application. Methods and reagents are provided for the detection of genetic rearrangements. Probes and test kits are provided for use in detecting genetic rearrangements, particularly for use in tumor cytogenetics, in the detection of disease related loci, specifically cancer, such as chronic myelogenous leukemia (CML) and for biological dosimetry. Methods and reagents are described for cytogenetic research, for the differentiation of cytogenetically similar but genetically different diseases, and for many prognostic and diagnostic applications.

  11. Living Technology

    DEFF Research Database (Denmark)

    2010-01-01

    This book is aimed at anyone who is interested in learning more about living technology, whether coming from business, the government, policy centers, academia, or anywhere else. Its purpose is to help people to learn what living technology is, what it might develop into, and how it might impact...... our lives. The phrase 'living technology' was coined to refer to technology that is alive as well as technology that is useful because it shares the fundamental properties of living systems. In particular, the invention of this phrase was called for to describe the trend of our technology becoming...... increasingly life-like or literally alive. Still, the phrase has different interpretations depending on how one views what life is. This book presents nineteen perspectives on living technology. Taken together, the interviews convey the collective wisdom on living technology's power and promise, as well as its...

  12. Aspects of land application of sewage solids and gamma-irradiated dried sewage solids on calcareous soils

    International Nuclear Information System (INIS)

    McCaslin, B.D.; O'Connor, G.A.; Sivinski, J.S.

    1980-01-01

    One of the cheapest and generally most convenient methods of disposing of sewage sludge is by land application. The greatest risks of land application are potential contamination of the environment by heavy metals, other toxicants, and pathogens. Irradiation of sewage sludge has been shown to have little or no effect on sludge elements available to plants, and can remove the potential pathogen problem. Work at New Mexico State University has shown that, with little risk, gamma-irradiated sewage sludge can be used to great advantage for crop production, especially on highly calcareous soils low in heavy metals essential for plant growth

  13. Effect of four acidifying materials added to a calcareous soil on the availability of phosphorus to ryegrass

    Energy Technology Data Exchange (ETDEWEB)

    Sen Gupta, M B; Cornfield, A H

    1964-12-01

    Ryegrass was grown in a pot test using a calcareous soil (0.36% calcium carbonate) treated with sulfur, ammonium sulfate, ferrous sulfate, and aluminium sulfate at 0.1% sulfur-equivalent, with potassium nitrate added where necessary, including the control, to equalize nitrogen supply. The sulfur treatment was the only one which significantly increased dry matter yields, total phosphorus uptake and top/root ratios in dry matter yields and total phosphorus. The ammonium sulfate, ferrous sulfate, and aluminium sulfate treatments significantly reduced top/root ratios in dry-matter yields and total phosphorus. 6 references, 1 table.

  14. PRIMARY CEMENTED BIPOLAR HEMIARTHROPLASTY WITH TROCHANTERIC AND CALCAR RECONSTRUCTION IN UNSTABLE INTERTROCHANTERIC FRACTURES IN ELDERLY: A PROSPECTIVE STUDY

    Directory of Open Access Journals (Sweden)

    Pandu Ranga Vital

    2015-09-01

    Full Text Available INTRODUCTION : To avoid the complications and morbidity associated with attempted Osteosynthesis of the so called Unstable inter - trochanteric fractures in the elderly population, Primary Cemented Bipolar hemiarthroplasty been around for over three decades now. But, hardly any emphasis been given over the technical aspects to i mprove the functional outcome. Present study is one such, following reconstructive attempts ( O f primary cemented bipolar hemiarthroplasty with trochanter and calcar reconstruction in the elderly population to reduce the risk of unstable Hemiarthroplasty. MATERIALS AND METHODS: This prospective study included 20 cases of elderly patients with mean age of 73.5 years (Age range 66 to 82 yr who sustained multifragmentary/communited inter - trochanteric femur fracture treated with Primary cemented bipolar hemiar throplasty with trochanteric and calcar reconstruction to emphasize the importance of restoration soft tissue tension to reduce the risk of unstable Hemiarthroplasty. Essential Technical steps include Figure of eight / multiple wire loop technique of recons truction ( with or without K ‘wires of greater trochanter/ abductor mechanism and calcar reconstruction either by wiring Lesser trochanteric fragment and or insertion of cortical piece of bone graft (medially under the collar of the prosthesis harvested f rom head and neck fragment. The patients were followed up at six week, three month, six month and one year postoperatively and assessed using Harris Hip Score (HHS. RESULTS: The mean HHS score was 85 (range 69 to 91 at the end of one year. The main clini cal measures were early post - operative full weight bearing, post - operative complication & functional outcome. The time to full weight bearing, the rate of post - operative complications & functional outcome was significantly better in cemented bipolar arthro plasty group. CONCLUSION: The authors strongly believe that primary cemented bipolar

  15. Improvement of malaria diagnostic system based on acridine orange staining.

    Science.gov (United States)

    Kimura, Masatsugu; Teramoto, Isao; Chan, Chim W; Idris, Zulkarnain Md; Kongere, James; Kagaya, Wataru; Kawamoto, Fumihiko; Asada, Ryoko; Isozumi, Rie; Kaneko, Akira

    2018-02-07

    Rapid diagnosis of malaria using acridine orange (AO) staining and a light microscope with a halogen lamp and interference filter was deployed in some malaria-endemic countries. However, it has not been widely adopted because: (1) the lamp was weak as an excitation light and the set-up did not work well under unstable power supply; and, (2) the staining of samples was frequently inconsistent. The halogen lamp was replaced by a low-cost, blue light-emitting diode (LED) lamp. Using a reformulated AO solution, the staining protocol was revised to make use of a concentration gradient instead of uniform staining. To evaluate this new AO diagnostic system, a pilot field study was conducted in the Lake Victoria basin in Kenya. Without staining failure, malaria infection status of about 100 samples was determined on-site per one microscopist per day, using the improved AO diagnostic system. The improved AO diagnosis had both higher overall sensitivity (46.1 vs 38.9%: p = 0.08) and specificity (99.0 vs 96.3%) than the Giemsa method (N = 1018), using PCR diagnosis as the standard. Consistent AO staining of thin blood films and rapid evaluation of malaria parasitaemia with the revised protocol produced superior results relative to the Giemsa method. This AO diagnostic system can be set up easily at low cost using an ordinary light microscope. It may supplement rapid diagnostic tests currently used in clinical settings in malaria-endemic countries, and may be considered as an inexpensive tool for case surveillance in malaria-eliminating countries.

  16. TANTANGAN DAN PELUANG JURUSAN TADRIS DI IAIN/STAIN

    Directory of Open Access Journals (Sweden)

    Mohammad Kosim

    2009-01-01

    Full Text Available A consequence of dualism in education policy, the implementatin of tadris in IAIN often faces many problems. This paper will describe the history and the development of tadris in IAIN/STAIN. The discussion begins with the origin of tadris in IAIN, problems araise in the implementation of tadris in IAIN/STAIN, including the alumni’s problem. In addition, this article also reveals several opportunities for tadris graduation to develop madrasah as purely religious school to public islamic school as the result of the paradigm change.

  17. Fungal Fluorescence in Hematoxylin-Eosin Stained Sections

    Directory of Open Access Journals (Sweden)

    Murat Durdu

    2017-06-01

    Full Text Available A forty-six-year-old male presented to our dermatology clinic with two-year history of itching on his groin. His medical history revealed various topical corticosteroid creams without improvement of the skin lesion. Dermatological examination revealed erythematous nodules and follicular pustules on erythematous background on the inguinal area (Figure 1a. Potassium hydroxide (KOH examination was negative. Tzanck smear revealed abundant neutrophils without bacteria, fungi, or parasite. The histopathological examination showed granuloma formation with multinuclear giant cells and Periodic acid-Schiff (PAS-positive hyphae and spores around the hair follicles (Figure 1b, 1c. Hematoxylin-eosin (H&E-stained slides were examined under an immunofluorescence microscope, and these hyphae and spores showed autofluorescence (Figure 1d. Based on the clinical and histopathological findings, a Majocchi’s granuloma was considered. All lesions disappeared with topical and systemic terbinafine (250 mg/day treatment for six weeks.\tPearls;\tClinical: Not only bacteria, but also fungi, parasites, and viruses may cause folliculitis. Cytology should be initially done to identify the causes of infectious folliculitis. In case of negative cytology, histopathological examination and molecular methods can be used.\tCytological: To cytologically identify all of the causes of folliculitis, four separate samples should be taken: (i the first sample is stained with May-Grünwald-Giemsa for routine cytological examination; (ii the second sample is used for KOH testing; (iii the third sample is stained with an acid-fast stain to detect mycobacteria; and (iv the last specimen is Gram-stained to identify whether it is Gram-positive or Gram-negative (1. Histopathological: In infectious diseases, a definitive diagnosis should be done to identify the etiologic agent. The detection of fungal elements is challenging, when histopathological examination is performed with the H

  18. News from the Biological Stain Commission no. 12

    DEFF Research Database (Denmark)

    Lyon, H O

    2012-01-01

    In this 12(th) issue of News from the Biological Stain Commission (BSC) under the heading of Regulatory affairs, the Biological Stain Commission's International Affairs Committee presents information from the meetings of ISO/TC 212/WG 1 Quality and competence in the medical laboratory and ISO....../TC 212/WG 3 In vitro diagnostic products both held on 2 - 3 June 2010, plus information on the second plenary meeting of ISO/TC 212 Clinical laboratory testing and in vitro diagnostic test systems held on 4 June 2010. All meetings took place in Seoul, Republic of Korea. Finally, information is provided...

  19. Evaluation Method of Accumulated Cooking Oil Stains in Room

    OpenAIRE

    五十嵐, 由利子; 中村, 和吉; 萬羽, 郁子; Igarashi, Yuriko; Nakamura, Kazuyoshi; Banba, Ikuko

    2005-01-01

    The diffusion of the oil mist while cooking affects the entire room, leaving stains on the ceiling and walls. The validity of measuring the color difference of stains was examined by installing teflon plates in the kitchen and the adjacent space with a view to assessing the oil diffusion. Four houses were designated for the examination. In each house, four teflon plates (20×40mm) were installed on the ceiling and walls of the kitchen and the space adjacent to it. Then, one plate was removed a...

  20. The impact of wildland fires on calcareous Mediterranean pedosystems (Sardinia, Italy) - An integrated multiple approach.

    Science.gov (United States)

    Capra, Gian Franco; Tidu, Simona; Lovreglio, Raffaella; Certini, Giacomo; Salis, Michele; Bacciu, Valentina; Ganga, Antonio; Filzmoser, Peter

    2018-05-15

    Sardinia (Italy), the second largest island of the Mediterranean Sea, is a fire-prone land. Most Sardinian environments over time were shaped by fire, but some of them are too intrinsically fragile to withstand the currently increasing fire frequency. Calcareous pedoenvironments represent a significant part of Mediterranean areas, and require important efforts to prevent long-lasting degradation from fire. The aim of this study was to assess through an integrated multiple approach the impact of a single and highly severe wildland fire on limestone-derived soils. For this purpose, we selected two recently burned sites, Sant'Antioco and Laconi. Soil was sampled from 80 points on a 100×100m grid - 40 in the burned area and 40 in unburned one - and analyzed for particle size fractions, pH, electrical conductivity, organic carbon, total N, total P, and water repellency (WR). Fire behavior (surface rate of spread (ROS), fireline intensity (FLI), flame length (FL)) was simulated by BehavePlus 5.0.5 software. Comparisons between burned and unburned areas were done through ANOVA as well as deterministic and stochastic interpolation techniques; multiple correlations among parameters were evaluated by principal factor analysis (PFA) and differences/similarities between areas by principal component analysis (PCA). In both sites, fires were characterized by high severity and determined significant changes to some soil properties. The PFA confirmed the key ecological role played by fire in both sites, with the variability of a four-modeled components mainly explained by fire parameters, although the induced changes on soils were mainly site-specific. The PCA revealed the presence of two main "driving factors": slope (in Sant'Antioco), which increased the magnitude of ROS and FLI; and soil properties (in Laconi), which mostly affected FL. In both sites, such factors played a direct role in differentiating fire behavior and sites, while they played an indirect role in determining

  1. Origin and Distribution of Methane Entrapped in Calcareous Alpine Proglacial Soil

    Science.gov (United States)

    Zhu, Biqing; Schroth, Martin H.; Henneberger, Ruth; Kübler, Manuel; Zeyer, Josef

    2017-04-01

    Methane (CH4) is an important greenhouse gas. The atmospheric methane concentration has been increasing in recent years, which is caused by imbalance between sources and sinks. Methane has been recently discovered to be entrapped in calcareous Swiss Alpine proglacial soil. This CH4 can be released upon mechanical impact and acidification. However, the amount, distribution and environmental fate of this entrapped CH4 in proglacial environment remain unknown. The entrapped CH4 in proglacial soil may be of modern or ancient origin. Modern origin includes ongoing or recent microbial CH4 production (methanogenesis) in subglacial or proglacial environments. An ancient origin mainly refers to CH4 produced thermogenically. This soil entrapped CH4 might be a common phenomenon along the entire glacial forefield, or it might only be present at few locations and depth. We present results of studies from two Swiss Alpine Glacier catchments, Wildstrubel Glacier (Canton Valais) and the Griessfirn Glacier (Canton Uri). Our main goals were 1) to assess the origin of CH4 entrapped in various glacial environments (subglacial, proglacial and supraglacial, soil and bedrocks) using geochemical and microbiological evidence; 2) to assess the spatial distribution of entrapped CH4. We performed geochemical analysis (CH4 content, gas wetness ([C1]/[C2-C3] alkane ratio), CH4 stable 13C- and 2H-isotopes, TOC) on subglacial, proglacial, and supraglacial soil samples collected from well-aerated and water-logged locations. Geochemical analysis was also selectively conducted on pore-water samples and on rock samples collected from different geological formations along the catchments. We also performed batch incubations on soil samples collected from subglacial, proglacial water-logged and supraglacial zones. In addition, for the aforementioned three types of samples, we also performed molecular analyses targeting the mcrA gene, which encodes the α-subunit of the enzyme methyl-coenzyme M reductase

  2. Geochemical processes in a calcareous sandstone aquifer during managed aquifer recharge with desalinated seawater

    Science.gov (United States)

    Ganot, Yonatan; Russak, Amos; Siebner, Hagar; Bernstein, Anat; Katz, Yoram; Guttman, Jospeh; Kurtzman, Daniel

    2017-04-01

    In the last three years we monitor Managed Aquifer Recharge (MAR) of post-treated desalinated seawater (PTDES) in an infiltration pond, at the Menashe site that overlies the northern part of the Israeli Coastal Aquifer. The PTDES are stabilized with CaCO3 during post-treatment in the desalination plant and their chemical composition differs from those of any other water recharged to the aquifer and of the natural groundwater. We use suction cups in the unsaturated zone, shallow observation wells within the pond and production wells that encircles the MAR Menashe site, to study the geochemical processes during MAR with PTDES. Ion-enrichment (remineralization) of the recharged water was observed in both unsaturated zone and shallow observation wells samples. Enrichment occurs mainly in the first few meters below the pond surface by ion-exchange processes. Mg2+ enrichment is most prominent due to its deficiency in the PTDES. It is explained by ion-exchange with Ca2+, as the PTDES (enriched with Ca2+) infiltrates through a calcareous-sandstone aquifer with various amount of adsorbed Mg2+ (3-27 meq/kg). Hence, the higher concentration of Ca+2 in the PTDES together with its higher affinity to the sediments promotes the release of Mg2+ ions to the recharged water. Water isotopes analysis of the production wells were used to estimate residence time and mixing with local groundwater. At the end of 2016, it was found that the percentage of PTDES in adjacent down-gradient production wells was around 10%, while more distant or up-gradient wells show no mixing with PTDES. The distinct isotope contrast between the recharged desalinated seawater (δ2H=+11.2±0.2‰) and the local groundwater (δ2H ranged from -22.7 to -16.7‰) is a promising tool to evaluate future mixing processes at the Menshae MAR site. Using the Menashe MAR system for remineralization could be beneficial as a primary or complementary post-treatment technique. However, the sustainability of this process is

  3. Zinc and Copper Release Kinetics in a Calcareous Soil amended with Manure and Vermicompost

    Directory of Open Access Journals (Sweden)

    hamid reza motaghian

    2017-02-01

    Full Text Available Introduction: Use of organic fertilizers such as vermicompost in agricultural soils with low organic matter content is almost considered as a one way for adding nutrients in these soils. However, application of these fertilizers may affect micronutrient release characteristics. Micronutrient release Kinetics in soils especially in amended soils give information about potential of amended soils to release these elements into solution. Although it is important to study kinetics of micronutrient release from soils to identify soil micronutrients buffering capacity, little attention has been paid to micronutrients desorption rate studies especially in amended soils. The rate of release micronutrients from soil solid phase by considering micronutrients as adsorbed ions or in mineral forms is an important parameter in nutrition of plants by microelements and a dynamic factor that regulates its continuous supply to growing plants; nonetheless, little attention has been paid to micronutrients kinetics inrelease studies. Material and Methods: In this study, kinetics of zinc (Zn and copper (Cu were compared in one calcareous soil amended with 0, 0.5, and 1% (w/w of manure and vermicompost in a completely randomized design and then amended and un-amended soils were incubated at field capacity, for 30 days. After incubation period, amended and un-amended soils were air-dried and were prepared to kinetics study. Kinetics of Zn and Cu release were studied by successive extraction with DTPA-TEA solution. Two grams of the amended and un-amended soils, in triplicate, suspended in 20 ml DTPA-TEA solution were equilibrated at 25±10C for 1, 8, 24, 48, 72, 96, 120, 144, 168, 336 and 504 h by shaking for 15 min. before incubation and 15 min. before the suspensions were centrifuged. Seven drops of toluene were added to each 1000 ml of extractant to inhibit microbial activity. Zinc and copper desorption with time was fitted by using different equations (Zero

  4. Assessment of inceptisols soil quality following long-term cropping in a calcareous environment.

    Science.gov (United States)

    Rezapour, Salar; Samadi, A

    2012-03-01

    The combination of morphological, clay mineralogy, physicochemical, and fertilitical properties of inceptisols were compared for monitoring soil quality response following long-term agricultural activities. For this target, fifty-nine paired surface soils belonging to five subgroups of inceptisols from the major sugar beet growing area and the adjoining virgin lands were described, sampled, and analyzed. The soils were alkaline and calcareous as characterized by high pH, ranging from 7.2 to 8, and calcium carbonate equivalent, ranging from 60 to 300 g kg(-1). Following long-term sugar beet cultivation, morphological properties modifications were reflected as weakening of structure, hardening of consistency, and brightening of soil color. Although, the quantity of clay minerals did not significantly change through long-term cropping, some modifications in the XRD pattern of illite and smectite were observed in the cultivated soils compared to the adjoining virgin lands mainly as a result of potassium depletion. Without significant variation, sand content decreased by 4-55% and silt and clay increased by 3-22% and 2-15%, respectively, in the cultivated soils than to that of the virgin lands. Both negative and positive aspects of soil quality were reflected regarding soil chemical and fertilitical properties and the role of negative effects far exceeded the role of positive effects. Typic calcixerepts was known to be more degraded through a significant decrease (P ≤ 0.001) in mean value of soil organic carbon (a drop of 24%), total N (a drop of 23%), available K (a drop of 42%), exchangeable K (a drop of 45%), potassium adsorption ratio and potassium saturation ratio (a drop of 44% and 42%, respectively) and a significant increase (P ≤ 0.001) in EC (a rise of 53%). Soil quality index, calculated based on nine soil properties [coarse fragments, pH, SOC, total N, ESP, exchangeable cations (Ca, Mg, and K), and available phosphorus], indicated that 60% of the all soil

  5. Physical and microbiological properties of alluvial calcareous Çumra province soils (Central Anatolia, Turkey

    Directory of Open Access Journals (Sweden)

    Ahmet Sami Erol

    2015-04-01

    Full Text Available Alluvial calcareous soils in Central Anatolia (Konya province, Çumra district has a heavy granulometric composition (average clay, low organic carbon content (less than 1%, but stable pore space structure and favorable agrophysical properties. Studies of the water regime in drip irrigation confirm favorable hydrological properties of these soils. It is assumed that the favorable structure of the pore space due to vigorous activity a large and diverse soil biota. Four phyla dominate in soil biota, among which predominate Actinobacteria. The higher (Streptomyces, and lower (three species Rhodococcus actinobacteria are predominant in large amounts as a part of this phyla. Large biodiversity at a sufficiently high bacteria richness formed the structure of the microbial community that contribute to the balanced production of specific metabolites, including gases (CO2, N2, which allows the soil to function actively, preventing compaction of the pore space and maintaining optimal density, porosity, hydrologic properties of the studied silty clay soils. m the uppermost soil horizons. Analyses of heavy mineral fraction show presence of metamorphic and igneous minerals which indicate participation of weathering products from other rock types in the nearby area. The types of heavy minerals in soils depend more on composition of parent rocks and geomorphic position than on climate type. Soils from Nova Lovcha show similar composition, but the quantity of goethite and hematite significantly increase in soil from plain. Typical high-metamorphic minerals as andalusite, kyanite and sillimanite present only in Nova Lovcha, while garnet dominates in Petrovo and opaque minerals - in Dobrostan. Red soils, formed on slopes, where erosion prevails over accumulation, contain more illite, smectite and vermiculite-smectite, and very few or no kaolinite, whereas the kaolinite is dominant in soils formed on plain. The mineralogical composition of clays in different

  6. A review of the mathematical models used for simulation of calcareous stone deterioration in historical buildings

    Science.gov (United States)

    Saba, M.; Quiñones-Bolaños, E. E.; Barbosa López, Aida Liliana

    2018-05-01

    Historic buildings and monuments are often composed of carbonate-based stone materials, susceptible to deterioration by the action of acidic substances on its main component, calcite (CaCO3). Today the levels of air pollution that attack heterogeneous structures with a mixture of different materials, usually of complex and articulated geometries, are the main responsible of the damage of calcareous stones. However the mechanisms of degradation of the stone and the factors that affect them cannot be simply specified, due to the sum coupled processes involving physical, chemical and biological changes, associated with capillarity and porosity, on the other hand the management of large number of samples and the cost of characterization analysis, modeling can contemplate a tool for the care and protection of real estate over time. Reason why this work shows a bibliographical review of the mathematical models that aim to describe how the deterioration of the surfaces of these structures varies over time, with particular attention to surface recession of stone, as a function of sets of variables that have been considered determinants in the different cases studied. It has been shown that in the last 30 years the models has had a revealing evolution due to the fact that the phenomenon has been gradually understood, putting in the background variables such as SO2 because of its reduction worldwide, and introducing variables such as HNO3 which has had, on the contrary, increasing values. In addition, it has been shown that linear polynomials, even if they lend themselves well to represent the phenomenon, in the last 10 years have been replaced by equations or systems of differential equations with one or more variables taken into account. Finally, it was revealed the lack of an inclusive model, capable of including all possible deterioration processes, and that time by time can be adapted to different case studies, in different parts of the world and with different

  7. Evaluation of a fluorescent lectin-based staining technique for some acidophilic mining bacteria

    International Nuclear Information System (INIS)

    Fife, D.J.; Bruhn, D.F.; Miller, K.S.; Stoner, D.L.

    2000-01-01

    A fluorescence-labeled wheat germ agglutinin staining technique was modified and found to be effective for staining gram-positive, acidophilic mining bacteria. Bacteria identified by others as being gram positive through 16S rRNA sequence analyses, yet clustering near the divergence of that group, stained weakly. Gram-negative bacteria did not stain. Background staining of environmental samples was negligible, and pyrite and soil particles in the samples did not interfere with the staining procedure

  8. A generally applicable sequential alkaline phosphatase immunohistochemical double staining

    NARCIS (Netherlands)

    van der Loos, Chris M.; Teeling, Peter

    2008-01-01

    A universal type of sequential double alkaline phosphatase immunohistochemical staining is described that can be used for formalin-fixed, paraffin-embedded and cryostat tissue sections from human and mouse origin. It consists of two alkaline phosphatase detection systems including enzymatic

  9. Pre-staining thin layer chromatography method for amino acid ...

    African Journals Online (AJOL)

    Jane

    2010-12-13

    Dec 13, 2010 ... inexpensive and the results obtained were clean and reproducible. However, it is suitable for the high throughput screening of amino acid-producing strains. Key words: Thin layer chromatography, pre-staining, amino acid detection. INTRODUCTION. Several analytical techniques have been often used for.

  10. Color and dichroism of silver-stained glasses

    International Nuclear Information System (INIS)

    Molina, Gloria; Murcia, Sonia; Molera, Judit; Roldan, Clodoaldo; Crespo, Daniel; Pradell, Trinitat

    2013-01-01

    Yellow decorations in glasses have been produced since the beginning of the fourteenth century by incorporating metallic silver nanoparticles into the glass (from a few to some tens of nanometers). The optical response of the glass-particles composite is determined by the surface plasmon resonance absorption and scattering of the nanometric metallic particles. Generally, the same color is perceived in reflection and in transmission although dichroic effects are occasionally observed. As silver-stained glasses were designed to be observed in transmission, tuning the transmission color from yellow to red was of technological interest. The relationship between the color observed both in transmission and reflection and the composition and nanostructure of regular (yellow) and dichroic (yellow and red) silver stains from the Renaissance (late fifteenth and sixteenth century, respectively) is related to the presence of a layer (of about 10–20 μm thick) of metallic silver nanoparticles (from few to 100 nm in size). The correlation between the colors observed and the silver stain nanostructure is studied with particular emphasis on the origin of the dichroic behavior. The optical response is computed and compared to the experimental data. Differences in the synthesis parameters responsible for the colors and for the dichroic behavior of the silver stain glasses are proposed. This is essential for the replication of the glass pieces which are required as replacements in the restoration/conservation of the windows but is also of broader interest

  11. Alternate gram staining technique using a fluorescent lectin.

    Science.gov (United States)

    Sizemore, R K; Caldwell, J J; Kendrick, A S

    1990-01-01

    Fluorescence-labeled wheat germ agglutinin binds specifically to N-acetylglucosamine in the outer peptidoglycan layer of gram-positive bacteria. The peptidoglycan layer of gram-negative bacteria is covered by a membrane and is not labeled by the lectin. By exploiting this phenomenon, an alternative Gram staining technique has been developed. Images PMID:1697149

  12. Black stain and dental caries in Filipino schoolchildren.

    NARCIS (Netherlands)

    Heinrich-Weltzien, R.; Monse, B.; Palenstein Helderman, W.H. van

    2009-01-01

    Black stain is defined as dark pigmented exogenous substance in lines or dots parallel to the gingival margin and firmly adherent to the enamel at the cervical third of the tooth crowns in the primary and permanent dentition. OBJECTIVES: This study was conducted to assess the prevalence of black

  13. The use of special stains in liver biopsy interpretation: Implications ...

    African Journals Online (AJOL)

    2015-12-03

    Dec 3, 2015 ... Key words: Biliary disease, iron overload, liver biopsy, special stains. Date of Acceptance: 03-Dec- .... effect of cutting fresh sections after trimming. This limits ... alcohol as a significant factor in the iron deposition found in these ...

  14. Amalgam stained dentin: a proper substrate for bonding resin composite?

    NARCIS (Netherlands)

    Scholtanus, J.D.

    2016-01-01

    Nowadays the use of dental amalgam is mostly abandoned and substituted by tooth colored resin composites that can be bonded to teeth tissues by adhesive techniques. The aim of this thesis was to find out whether dark stained dentin, as often observed after removal of amalgam restorations and

  15. Color and dichroism of silver-stained glasses

    Energy Technology Data Exchange (ETDEWEB)

    Molina, Gloria [Universitat Politecnica de Catalunya, Center for Research in NanoEngineering (Spain); Murcia, Sonia [Universidad de Valencia, Instituto de Ciencia de los Materiales (Spain); Molera, Judit [Universitat de Vic, GRTD, Escola Politecnica Superior (Spain); Roldan, Clodoaldo [Universidad de Valencia, Instituto de Ciencia de los Materiales (Spain); Crespo, Daniel; Pradell, Trinitat, E-mail: Trinitat.Pradell@upc.edu [Universitat Politecnica de Catalunya, Center for Research in NanoEngineering (Spain)

    2013-09-15

    Yellow decorations in glasses have been produced since the beginning of the fourteenth century by incorporating metallic silver nanoparticles into the glass (from a few to some tens of nanometers). The optical response of the glass-particles composite is determined by the surface plasmon resonance absorption and scattering of the nanometric metallic particles. Generally, the same color is perceived in reflection and in transmission although dichroic effects are occasionally observed. As silver-stained glasses were designed to be observed in transmission, tuning the transmission color from yellow to red was of technological interest. The relationship between the color observed both in transmission and reflection and the composition and nanostructure of regular (yellow) and dichroic (yellow and red) silver stains from the Renaissance (late fifteenth and sixteenth century, respectively) is related to the presence of a layer (of about 10-20 {mu}m thick) of metallic silver nanoparticles (from few to 100 nm in size). The correlation between the colors observed and the silver stain nanostructure is studied with particular emphasis on the origin of the dichroic behavior. The optical response is computed and compared to the experimental data. Differences in the synthesis parameters responsible for the colors and for the dichroic behavior of the silver stain glasses are proposed. This is essential for the replication of the glass pieces which are required as replacements in the restoration/conservation of the windows but is also of broader interest.

  16. A comparison study of histochemical staining of various tissues after ...

    African Journals Online (AJOL)

    mean =5.28) then Carnoy's (mean = 4.00). For Alcian blue and Perl's Prussian blue, the best staining qualities were obtained by Formalin (mean = 4.76 and 5.64 respectively) followed by Carnoy's (mean = 2.88 and 3.92 respectively).

  17. Christendom's Narratives and the Stained Glass Designs of Yusuf ...

    African Journals Online (AJOL)

    This paper attempts a recast of Christendom's narratives in the stained glass designs of Yusuf Cameron Adebayo Grillo as the distinctive overarching mechanism of the evangelisation paradigm of the post Vatican II Church. It, therefore, draws attention to the delimitation of time frames in the history of the art form. Using the ...

  18. Comparison of various staining techniques in the diagnosis of ...

    African Journals Online (AJOL)

    Journal of Medical and Biomedical Sciences ... This can be achieved via various diagnostic techniques, commonly microscopy in this environment, hence the need to compare the efficacy of the commonly ... The objective of the study is to identify the most effective of the commonly used stains in identifying these parasites.

  19. Stain-free histopathology by programmable supercontinuum pulses

    DEFF Research Database (Denmark)

    Tu, Haohua; Liu, Yuan; Turchinovich, Dmitry

    2016-01-01

    The preparation, staining, visualization and interpretation of histological images of tissue is well accepted as the gold standard process for the diagnosis of disease. These methods have a long history of development, and are used ubiquitously in pathology, despite being highly time- and labour-...

  20. Laser beam diameter for port wine stain treatment

    NARCIS (Netherlands)

    Keijzer, M.; Pickering, J. W.; van Gemert, M. J.

    1991-01-01

    Optimal port wine stain treatment requires the selective absorption of light by the ectatic blood vessels. We investigated whether deeper blood vessels can be coagulated, without damaging other cutaneous structures, by varying the laser beam diameter. The penetration of the light was simulated with

  1. A comparision of modified and standard papanicolaou staining ...

    African Journals Online (AJOL)

    Objective: To compare modified and standard Papanicolaou (Pap) staining methods in the assessment of the cervical smears. Design: A descriptive cross sectional study. setting: Kenyatta National Hospital. Subjects: One hundred and sixty two women who were eligible for a pap smear and met the inclusion criteria.

  2. Borax methylene blue: a spectroscopic and staining study.

    Science.gov (United States)

    Donaldson, P T; Russo, A; Reynolds, C; Lillie, R D

    1978-07-01

    Borax methylene blue is quite stable at room temperatures of 22-25 C. At 30 C polychroming is slow; during 50 days in a water bath at this temperature the absorption peak moves from 665 to 656 nm. At 35 C, the absorption peak reaches 660 nm in 7 days, 654 nm in 14. At 60 C polychroming is rapid, the absorption peak reaching 640-620 nm in 3 days. When the pH of the borax methylene blue solutions, normally about 9.0, is adjusted to pH 6.5, the absorption peak remains at 665 nm even when incubated at 60 C for extended periods. When used as a blood stain 0.4 ml borax methylene blue (1% methylene blue in 1% borax), 4 ml acetone, 2 ml borax-acid phosphate buffer to bring the solution to pH 6.5, and distilled water to make 40 ml, with 0.2 ml 1% eosin added just before using, an excellent Nocht-Giemsa type stain is achieved after 30 minutes staining. The material plasmodia P. falciparum, P. vivax, and P. berghei stain moderate blue with dark red chromatin and green to black pigment granules. The study confirms Malachowski's 1891 results and explains Gautier's 1896-98 failure to duplicate it.

  3. a comparison of modified and standard papanicolaou staining ...

    African Journals Online (AJOL)

    2011-07-07

    Jul 7, 2011 ... modified pap method and standard Papanicolaou method respectively. The staining characteristics in .... alcohol was replaced by 0.5 % acetic acid and also, .... was 37.1, standard deviation of 8.0 and a median of. 36.5 years.

  4. Interlaboratory variability of Ki67 staining in breast cancer

    NARCIS (Netherlands)

    Focke, Cornelia M.; Bürger, Horst; van Diest, Paul J.; Finsterbusch, Kai; Gläser, Doreen; Korsching, Eberhard; Decker, Thomas; Anders, M.; Bollmann, R.; Eiting, Fr; Friedrich, K.; Habeck, J. O.; Haroske, G.; Hinrichs, B.; Behrens, A.; Krause, Lars Udo; Braun-Lang, U.; Lorenzen, J.; Minew, N.; Mlynek-Kersjes, M.; Nenning, H.; Packeisen, J.; Poche-de Vos, F.; Reyher-Klein, S.; Rothacker, D.; Schultz, M.; Sturm, U.; Tawfik, M.; Berghäuser, K. H.; Böcker, W; Cserni, G.; Habedank, S.; Lax, S.; Moinfar, F.; Regitnig, P.; Reiner-Concin, A.; Rüschoff, J.; Varga, Z.; Woziwodski, J.

    2017-01-01

    Background Postanalytic issues of Ki67 assessment in breast cancers like counting method standardisation and interrater bias have been subject of various studies, but little is known about analytic variability of Ki67 staining between pathology labs. Our aim was to study interlaboratory variability

  5. Phytoextraction potential of poplar (Populus alba L. var. pyramidalis Bunge) from calcareous agricultural soils contaminated by cadmium.

    Science.gov (United States)

    Hu, Yahu; Nan, Zhongren; Jin, Cheng; Wang, Ning; Luo, Huanzhang

    2014-01-01

    To investigate the phytoextraction potential of Populus alba L. var. pyramidalis Bunge for cadmium (Cd) contaminated calcareous soils, a concentration gradient experiment and a field sampling experiment (involving poplars of different ages) were conducted. The translocation factors for all experiments and treatments were greater than 1. The bioconcentration factor decreased from 2.37 to 0.25 with increasing soil Cd concentration in the concentration gradient experiment and generally decreased with stand age under field conditions. The Cd concentrations in P. pyramidalis organs decreased in the order of leaves > stems > roots. The shoot biomass production in the concentration gradient experiment was not significantly reduced with soil Cd concentrations up to or slightly over 50 mg kg(-1). The results show that the phytoextraction efficiency of P. pyramidalis depends on both the soil Cd concentration and the tree age. Populus pyramidalis is most suitable for remediation of slightly Cd contaminated calcareous soils through the combined harvest of stems and leaves under actual field conditions.

  6. Improving the relationship between soil characteristics and metal bioavailability by using reactive fractions of soil parameters in calcareous soils.

    Science.gov (United States)

    de Santiago-Martín, Ana; van Oort, Folkert; González, Concepción; Quintana, José R; Lafuente, Antonio L; Lamy, Isabelle

    2015-01-01

    The contribution of the nature instead of the total content of soil parameters relevant to metal bioavailability in lettuce was tested using a series of low-polluted Mediterranean agricultural calcareous soils offering natural gradients in the content and composition of carbonate, organic, and oxide fractions. Two datasets were compared by canonical ordination based on redundancy analysis: total concentrations (TC dataset) of main soil parameters (constituents, phases, or elements) involved in metal retention and bioavailability; and chemically defined reactive fractions of these parameters (RF dataset). The metal bioavailability patterns were satisfactorily explained only when the RF dataset was used, and the results showed that the proportion of crystalline Fe oxides, dissolved organic C, diethylene-triamine-pentaacetic acid (DTPA)-extractable Cu and Zn, and a labile organic pool accounted for 76% of the variance. In addition, 2 multipollution scenarios by metal spiking were tested that showed better relationships with the RF dataset than with the TC dataset (up to 17% more) and new reactive fractions involved. For Mediterranean calcareous soils, the use of reactive pools of soil parameters rather than their total contents improved the relationships between soil constituents and metal bioavailability. Such pool determinations should be systematically included in studies dealing with bioavailability or risk assessment. © 2014 SETAC.

  7. Stable isotopic information on calcareous pelitic rocks in the Tizapa volcanogenic massive sulfide deposit area, the United Mexican States

    International Nuclear Information System (INIS)

    Morozumi, Haruhisa; Metsugi, Hideya; Kita, Yoshiyuki; Suzuki, Toru

    1999-01-01

    Tizapa volcanogenic massive sulfide (VMS) deposit is hosted in greenschist facies metamorphic rocks; footwall is green schist of felsic to mafic metavolcanic rocks and hanging wall is graphite schist of metasedimentary pelitic rock. Pb-Pb dating of ore samples indicates 103.4Ma to 156.3Ma for the age of mineralization (JICA/MMAJ, 1991). Hanging wall graphite schist is partially calcareous and overlaid by upper formations consisting of calcareous shake and limestone. δ 13 C(per mille) PDB values were measured for carbonate and organic material in the graphite schist, and δ 18 O(per mille) SMOW values were also measured for same carbonate. Although carbonate and organic material were affected by the metamorphism after mineralization, δ 18 O of carbonate decreases from +22.1 per mille to +17.9 per mille, δ 13 C of carbonate decreases from +0.8 per mille to -4.3 per mille and δ 13 C of organic material decreases from -10.0 per mille to -15.6 per mille with the decrease of vertical distances to ore deposit from 54.20 m to 10.28 m. This phenomenon might indicate the change of sedimentary environment of the reduced condition where the sulfides were precipitated, with the change of temperature. If this assumption is adequate, the method applied in this study is useful for semi-quantitative evaluation to distinguish the favorable condition for the precipitation of sulfides of VMS. (author)

  8. Evidence of compositional and ultrastructural shifts during the development of calcareous tubes in the biofouling tubeworm, Hydroides elegans.

    Science.gov (United States)

    Chan, Vera Bin San; Vinn, Olev; Li, Chaoyi; Lu, Xingwen; Kudryavtsev, Anatoliy B; Schopf, J William; Shih, Kaimin; Zhang, Tong; Thiyagarajan, Vengatesen

    2015-03-01

    The serpulid tubeworm, Hydroides elegans, is an ecologically and economically important species whose biology has been fairly well studied, especially in the context of larval development and settlement on man-made objects (biofouling). Nevertheless, ontogenetic changes associated with calcareous tube composition and structures have not yet been studied. Here, the ultrastructure and composition of the calcareous tubes built by H. elegans was examined in the three early calcifying juvenile stages and in the adult using XRD, FTIR, ICP-OES, SEM and Raman spectroscopy. Ontogenetic shifts in carbonate mineralogy were observed, for example, juvenile tubes contained more amorphous calcium carbonate and were predominantly aragonitic whereas adult tubes were bimineralic with considerably more calcite. The mineral composition gradually shifted during the tube development as shown by a decrease in Sr/Ca and an increase of Mg/Ca ratios with the tubeworm's age. The inner tube layer contained calcite, whereas the outer layer contained aragonite. Similarly, the tube complexity in terms of ultrastructure was associated with development. The sequential appearance of unoriented ultrastructures followed by oriented ultrastructures may reflect the evolutionary history of serpulid tube biominerals. As aragonitic structures are more susceptible to dissolution under ocean acidification (OA) conditions but are more difficult to be removed by anti-fouling treatments, the early developmental stages of the tubeworms may be vulnerable to OA but act as the important target for biofouling control. Copyright © 2015 Elsevier Inc. All rights reserved.

  9. [Improvement of Phi bodies stain and its clinical significance].

    Science.gov (United States)

    Gong, Xu-Bo; Lu, Xing-Guo; Yan, Li-Juan; Xiao, Xi-Bin; Wu, Dong; Xu, Gen-Bo; Zhang, Xiao-Hong; Zhao, Xiao-Ying

    2009-02-01

    The aim of this study was to improve the dyeing method of hydroperoxidase (HPO), to analyze the morphologic features of Phi bodies and to evaluate the clinical application of this method. 128 bone marrow or peripheral blood smears from patients with myeloid and lymphoid malignancies were stained by improved HPO staining. The Phi bodies were observed with detection rate of Phi bodies in different leukemias. 69 acute myeloid leukemia (AML) specimens were chosen randomly, the positive rate and the number of Phi bodies between the improved HPO and POX stain based on the same substrate of 3, 3'diaminobenzidine were compared. The results showed that the shape of bundle-like Phi bodies was variable, long or short. while the nubbly Phi bodies often presented oval and smooth. Club-like Phi bodies were found in M(3). The detection rates of bundle-like Phi bodies in AML M(1)-M(5) were 42.9% (6/14), 83.3% (15/18), 92.0% (23/25), 52.3% (11/21), 33.3% (5/15) respectively, and those of nubbly Phi bodies were 28.6% (4/14), 66.7% (12/18), 11.1% (3/25), 33.3% (7/21), 20.0% (3/15) respectively. The detection rate of bundle-like Phi bodies in M(3) was significantly higher than that in (M(1) + M(2)) or (M(4) + M(5)) groups. The detection rate of nubbly Phi bodies in (M(1) + M(2)) group was higher than that in M(3) group. In conclusion, after improvement of staining method, the HPO stain becomes simple, the detection rate of Phi bodies is higher than that by the previous method, the positive granules are more obvious, and the results become stable. This improved method plays an important role in differentiating AML from ALL, subtyping AML, and evaluating the therapeutic results.

  10. Live Well

    Science.gov (United States)

    ... Health Conditions Live Well Mental Health Substance Use Smoking Healthy Diet Physical Activity Family Planning Living with HIV: Travel ... to his or her health and well-being. Smoking - Tobacco use is the ... year. Healthy Diet - No matter your HIV status, healthy eating is ...

  11. Healthy living

    Science.gov (United States)

    ... living URL of this page: //medlineplus.gov/ency/article/002393.htm Healthy living To use the sharing features on this page, please enable JavaScript. Good health habits can allow you to avoid illness and improve your quality of life. The following steps will help you ...

  12. Development of a preparation and staining method for fetal erythroblasts in maternal blood : Simultaneous immunocytochemical staining and FISH analysis

    NARCIS (Netherlands)

    Oosterwijk, JC; Mesker, WE; Ouwerkerk-van Velzen, MCM; Knepfle, CFHM; Wiesmeijer, KC; van den Burg, MJM; Beverstock, GC; Bernini, LF; van Ommen, Gert-Jan B; Kanhai, HHH; Tanke, HJ

    1998-01-01

    In order to detect fetal nucleated red blood cells (NRBCs) in maternal blood, a protocol was developed which aimed at producing a reliable staining method for combined immunocytochemical and FISH analysis. The technique had to be suitable for eventual automated screening of slides. Chorionic villi

  13. Persepsi Pemustaka Terhadap Kualitas Layanan Perpustakaan Pascasarjana STAIN Pamekasan

    Directory of Open Access Journals (Sweden)

    Hairul A Cahyo

    2014-07-01

    Full Text Available Library is one of supporting element from institute, which can fullfill user’s information need for teaching learning process especially in postgraduate STAIN Pamekasan. To create optimal and good service in postgraduate library, it can see from user’s perception in service quality in postgraduate STAIN Pamekasan. This research used data collection technic; observation, interview and documentation. Officer quality in giving servive to user visible in copability and attitude from officer it self. Library service also can see from collection of books in library to fullfill user’s need. Supporting tools in building and rooms. To complete some tools, it also need infrastructure to fullfill library needs in service. Infrastructure needed are utensils, it means to support library actinity which unused up such as; bookshelf, table and chair, computer and internet, air conditioner, room’s light or lamp, catalogue and photocopy machine.

  14. [Standardization of Blastocystis hominis diagnosis using different staining techniques].

    Science.gov (United States)

    Eymael, Dayane; Schuh, Graziela Maria; Tavares, Rejane Giacomelli

    2010-01-01

    The present study was carried out from March to May 2008, with the aim of evaluating the effectiveness of different techniques for diagnosing Blastocystis hominis in a sample of the population attended at the Biomedicine Laboratory of Feevale University, Novo Hamburgo, Rio Grande do Sul. On hundred feces samples from children and adults were evaluated. After collection, the samples were subjected to the techniques of spontaneous sedimentation (HPJ), sedimentation in formalin-ether (Ritchie) and staining by means of Gram and May-Grünwald-Giemsa (MGG). The presence of Blastocystis hominis was observed in 40 samples, when staining techniques were used (MGG and Gram), while sedimentation techniques were less efficient (32 positive samples using the Ritchie technique and 20 positive samples using the HPJ technique). Our results demonstrate that HPJ was less efficient than the other methods, thus indicating the need to include laboratory techniques that enable parasite identification on a routine basis.

  15. Lectins stain cells differentially in the coral, Montipora capitata

    Science.gov (United States)

    Work, Thierry M.; Farah, Yael

    2014-01-01

    A limitation in our understanding of coral disease pathology and cellular pathogenesis is a lack of reagents to characterize coral cells. We evaluated the utility of plant lectins to stain tissues of a dominant coral, Montipora capitata, from Hawaii. Of 22 lectins evaluated, nine of these stained structures in the upper or basal body wall of corals. Specific structures revealed by lectins that were not considered distinct or evident on routine hematoxylin and eosin sections of coral tissues included apical and basal granules in gastrodermis and epidermis, cnidoglandular tract and actinopharynx cell surface membranes, capsules of mature holotrichous isorhizas, and perivitelline and periseminal cells. Plant lectins could prove useful to further our understanding of coral physiology, anatomy, cell biology, and disease pathogenesis.

  16. Removing foxing stains from old paper at 157 nm

    International Nuclear Information System (INIS)

    Sarantopoulou, E.; Samardzija, Z.; Kobe, S.; Kollia, Z.; Cefalas, A.C.

    2003-01-01

    Using a molecular fluorine laser at 157 nm foxing stains were removed successfully from a 16th century old paper. Laser cleaning of stains and foxing from old paper manuscripts is far more effective at 157 nm in comparison to different wavelengths without leaving any yellowish after-effect on the paper. This is because at 157 nm illumination of old paper, complete bond breaking of all the organic molecules of the paper is taking place. Mass spectroscopy at 157 nm and for moderate laser intensities up to 1 mJ/cm 2 of old paper suffering from foxing indicate organic matter disintegration to small photofragments atomic, diatomic or triatomic, which are flying apart with supersonic speed. In addition high spatial resolution energy dispersive X-ray system (EDXS) analysis over the effected areas indicate the presence of iron, suggesting that biological activity is taking place preferentially in paper areas containing iron

  17. Solid-Color Stains on Western Redcedar and Redwood Siding

    Science.gov (United States)

    Mark Knaebe

    2013-01-01

    You have decided to put wood siding on your new house. Several questions are probably going through your mind: “What’s the best type of wood?” “Should I use paint or stain?” “Should I apply the finish before or after I install the siding?”

  18. An improved method for staining cell colonies in clonogenic assays

    OpenAIRE

    Guda, Kishore; Natale, Leanna; Markowitz, Sanford D.

    2007-01-01

    Clonogenic assay is a widely used experimental approach to test for the effects of drugs/genes on the growth and proliferative characteristics of cells in vitro. Accurate quantitation of treatment effects in clonogeneic assays depends on the ability to visualize and count cell colonies precisely. We report a novel method (referred as ETeB) for staining cell colonies grown on plastic and specially coated substrates like collagen. Using colon cancer cell lines grown on plastic and collagen, we ...

  19. PHACE syndrome misdiagnosed as a port-wine stain

    OpenAIRE

    Thomson, Jason; Greig, Aina; Lloyd, Claire; Morrison, Danny; Flohr, Carsten

    2015-01-01

    We present the case of a boy born with a large macular, segmental vascular anomaly over the left face, initially diagnosed as a capillary malformation (port-wine stain) by the postnatal paediatric team. The vascular anomaly in the face then grew rapidly during the first few weeks of life and started to occlude the left eye, causing parental concerns about the infant's vision. A dermatological opinion established that the lesion was a segmental infantile haemangioma (IH). This, in combination ...

  20. Hirschsprung's disease diagnosis: Comparison of immunohistochemical, hematoxilin and eosin staining

    OpenAIRE

    Memarzadeh, Mehrdad; Talebi, Ardeshir; Edalaty, Masod; Hosseinpour, Mehrdad; Vahidi, Nasrin

    2009-01-01

    Background: The diagnosis of Hirschsprung's disease (HD) is based on the absence of ganglion cells. In hemotoxilin and eosin (H and E) as well as acetylcholine esterase staining there are limitations in the diagnosis of immature ganglion cells in neonates. Methods: In this prospective study, 54 biopsies taken from suspected HD patients (five mucosal specimens and 49 full thickness specimens) were studied. In the laboratory, after preparing sections of paraffin embedded tissues, H and E staini...

  1. USE OF VITAL STAINING IN STORED HUMAN PLATELETS MORPHOFUNCTIONAL ANALYSIS

    Directory of Open Access Journals (Sweden)

    M. S. Makarov

    2014-01-01

    Full Text Available Apheresis and pooled platelet concentrates, stored at 22°C during 5 days, were studied with morho-functional platelet rate analysis, based on vital cell staining and registration with fluorescent microscope. It was revealed that apheresis and pooled PC had, on the average, normal values of morphological and functional parameters. On the other hand, both PC kept MFPR of cells only for 2 days storage. Longer PC storage caused the significant decay of morphological and functional platelet parameters.

  2. Technique and Feasibility of a Dual Staining Method for Estrogen Receptors and AgNORs

    Directory of Open Access Journals (Sweden)

    Lukas Günther

    2000-01-01

    Full Text Available A new staining method for dual demonstration of Estrogen receptors (ER and argyrophilc Nucleolus‐Organizer Regions (AgNORs was developed. To rule out possible reciprocal effects, serial slides of 10 invasive ductale breast cancers were stained with either the single staining method or the simultaneous ER/AgNOR‐staining method and investigated comparatively. By measuring the slides with the image analysis system AMBA, reciprocal effects could be excluded. It was proven that dual staining of both markers results in a reproducible and specific staining result. We concluded that it is justified to measure AgNORs in immunohistochemically stained cells.

  3. Study of stained glass window using PIXE-PIGE

    International Nuclear Information System (INIS)

    Weber, G.; Bemden, Y. Vanden; Pirotte, M.; Gilbert, B.

    2005-01-01

    We had the opportunity to study a large panel (100x80cm) containing more than 40 stained glass pieces. Among them several come from restorations having taken place at different periods. The study of this rather complex arrangement has been processed by stages:- the elemental composition of 16 zones were determined: several differences were identified and among them the Na/K ratio which allowed to set three groups of glass type; - the measurement of the Na concentrations by the two techniques give information in bulk (PIGE) and at the near surface (PIXE); the values defined by the (C PIGE -C PIXE) )/C PIGE plotted in function of the historical estimation of the age of the stained glass pieces (original and restored) indicate a real correlation between the two variables; - the red-colored pieces were specially investigated in order to determine which coloration technique was employed (bulk coloration, superficial staining, multilayered flashing, etc.); - the corrosion was investigated by scanning two different worsened zones with a 0.5mm diameter beam spot. This study shows the possibilities of the PIGE-PIXE association, but also points out some weaknesses, which have to be solved by other techniques; unfortunately, in that case, the non-destructive aspect could be lost

  4. Evaluation of surviving fraction using nonclonogenic staining densitometry method

    International Nuclear Information System (INIS)

    Nishiguchi, Iku; Ogawa, Koichi; Ito, Hisao; Hashimoto, Shozo

    1994-01-01

    This study was performed to compare our nonclonogenic survival assay (densitometry assay, DM assay) with the widely used clonogenic assay. The established cell lines (HaLa, RMUG, IMR, GOTO) were grown in F 10 medium. The cells were spread in 24-well plates, irradiated with different doses, cultured for about one week and stained with crystal violet after the culture period. Taking the transparent images of the stained well on the light source with the CCD camera, the images were collected with the matrix size 64 x 64, and the integrated optical density of the entire surface of each well was determined by computer with our original program. As the number of cells in the well is reflected by its staining density, the surviving fraction was calculated as the fraction of growth in the irradiated wells relative to controls. The survival curves obtained by the densitometry method showed good correlations with those obtained by clonogenic assay. It is possible to predict intrinsic radiosensitivity with this assay, even if the cells do not form good colonies. However, this method is based on measurements in cultures which depend on the metabolism and growth kinetics of the irradiated cells. Cells should grow exponetially in the same manner in any well to obtain a result similar to that of clonogenic assay, although growth kinetics may be altered by irradiation. This, the endpoint must be strictly standardized. (author)

  5. Living PSA

    International Nuclear Information System (INIS)

    Evans, M.G.K.

    1997-01-01

    The aim of this presentation is to gain an understanding of the requirements for a PSA to be considered a Living PSA. The presentation is divided into the following topics: Definition; Planning/Documentation; Task Performance; Maintenance; Management. 4 figs

  6. Phosphate solubilization and promotion of maize growth in a calcareous soil by penicillium oxalicum P4 and aspergillus niger P85

    Science.gov (United States)

    Alternative tactics for improving phosphorus nutrition in crop production are needed in China and elsewhere as the over-application of phosphatic fertilizers can adversely impact agricultural sustainability. Penicillium oxalicum P4 and Aspergillus niger P85 were isolated from a calcareous soil in C...

  7. Two fern species new to New Hampshire, with comments on the generation of calcareous-like habitat by base-poor rocks

    Science.gov (United States)

    Scott W. Bailey

    2013-01-01

    Incidental to other field investigations, I happened upon small populations of two fern species not previously reported from New Hampshire: Pellaea atropurpurea (L.) Link and Dryopteris filix-mas (L.) Schott. Both species are typically associated with calcareous habitats, although limestone and marble are nearly absent from New...

  8. Efficacy of Fe(o,o-EDDHA) and Fe(o,p-EDDHA) isomers in supplying Fe to strategy I plants differs in nutrient solution and calcareous soil.

    Science.gov (United States)

    Rojas, Carmen L; Romera, Francisco J; Alcántara, Esteban; Pérez-Vicente, Rafael; Sariego, Cristina; Garcaí-Alonso, J Ignacio; Boned, Javier; Marti, Gabriel

    2008-11-26

    The FeEDDHA [iron(3+) ethylenediamine di(o-hydroxyphenylacetic) acid] is one of the most efficient iron chelates employed in the correction of iron clorosis in calcareous soils. FeEDDHA presents different positional isomers: the ortho-ortho (o,o), the ortho-para (o,p), and the para-para (p,p). Of these isomers, the p,p cannot chelate Fe in soil solution in a wide range of pH values, while both o,o and o,p can. The objective of this work was to compare the efficiency of both isomers (o,o and o,p) to provide Fe to two Strategy I plants (tomato and peach) in nutrient solution (pH approximately 6.0), as well as in calcareous soil (pH approximately 8.4; CALCIXEREPT). For this, chelates of both o,o-EDDHA and o,p-EDDHA with 57Fe (a nonradioactive isotope of Fe) were used, where the 57Fe acts as a tracer. The results obtained showed that the o,o isomer is capable of providing sufficient Fe to plants in both nutrient solution and calcareous soil. However, the o,p isomer is capable of providing sufficient Fe to plants in nutrient solution but not in calcareous soil.

  9. Carboniferous calcareous algae and their associations in the San Emiliano and Lois-Ciguera Formations (Prov. León, NW Spain)

    NARCIS (Netherlands)

    Rácz, L.

    1965-01-01

    This study of the calcareous algae in the limestone deposits of the two formations (San Emiliano and Lois-Ciguera) in NW Spain is based on field observations and microscopical study. It was possible in the field to divide almost all the limestone members into smaller units on the basis of physical,

  10. Astronomical calibration of upper Campanian–Maastrichtian carbon isotope events and calcareous plankton biostratigraphy in the Indian Ocean (ODP Hole 762C)

    DEFF Research Database (Denmark)

    Thibault, Nicolas Rudolph; Husson, Dorothée; Harlou, Rikke

    2012-01-01

    An integrated framework of magnetostratigraphy, calcareous microfossil bio-events, cyclostratigraphy and d13C stratigraphy is established for the upper Campanian–Maastrichtian of ODP Hole 762C (Exmouth Plateau, Northwestern Australian margin). Bulk-carbonate d13C events and nannofossil bio-events...

  11. Calcareous nannofossils of the Jurassic/Cretaceous boundary strata in the Puerto Escaňo section (southern Spain) - biostratigraphy and palaeoecology

    Czech Academy of Sciences Publication Activity Database

    Svobodová, Andrea; Košťák, M.

    2016-01-01

    Roč. 67, č. 3 (2016), s. 223-238 ISSN 1335-0552 Institutional support: RVO:67985831 Keywords : Jurasic/Cretaceous boundary * southern Spain * Tethys * biostratigraphy * calcareous nannofossils * palaeoecology Subject RIV: DB - Geology ; Mineralogy Impact factor: 1.358, year: 2016

  12. New biostratigraphic evidence (texanitid ammonites, inoceramids and calcareous nannofossils) for the Upper and the uppermost Coniacian in the Bohemian Cretaceous Basin

    Czech Academy of Sciences Publication Activity Database

    Svobodová, Andrea; Košťák, M.; Čech, S.; Švábenická, L.

    2014-01-01

    Roč. 165, č. 4 (2014), s. 577-589 ISSN 1860-1804 Institutional support: RVO:67985831 Keywords : Bohemian Cretaceous Basin * Upper Coniacian * biostratigraphy * ammonites * inoceramids * calcareous nannofossils Subject RIV: DB - Geology ; Mineralogy Impact factor: 0.569, year: 2014

  13. Overview of the Plio-Pleistocene geology of Rhodes, Greece. Lithology, calcareous nannofossil biostratigraphy, and sampling of the Kallithea Bay section

    DEFF Research Database (Denmark)

    Thomsen, Erik; Rasmussen, Tine Lander; Hastrup, Annette

    2005-01-01

    -water deposits are assigned to the Lindos Bay clay. Calcareous nannofossil biostratigraphy shows that the age of the marine sequence is early Pleistocene. The brackish water sediments are difficult to date, but they are probably of late Pliocene age. Sixty-nine samples representing all environments were...

  14. Dynamics of phosphorus fractions in the rhizosphere of fababean (Phaseolus vulgaris L.) and maize (Zea mays L.) grown in calcareous and acid soils

    NARCIS (Netherlands)

    Li, G.; Li, Haigang; Leffelaar, P.A.; Shen, J.; Zhang, F.

    2015-01-01

    The dynamics of soil phosphorus (P) fractions were investigated, in the rhizosphere of fababean (Vicia faba L.) and maize (Zea mays L.) grown in calcareous and acid soils. Plants were grown in a mini-rhizotron with a thin (3 mm) soil layer, which was in contact with the root-mat, and considered as

  15. Evolution of the soil humus status on the calcareous Neogene clay dumps of the Sokolov quarry complex in the Czech Republic

    Czech Academy of Sciences Publication Activity Database

    Abakumov, E.V.; Frouz, Jan

    2009-01-01

    Roč. 42, č. 7 (2009), s. 718-724 ISSN 1064-2293 Grant - others:Russian Foundation for Basic Research(XE) 08-04-01128 Institutional research plan: CEZ:AV0Z60660521 Keywords : soil humus status * calcareous Neogene clay dumps * Sokolov quarry complex Subject RIV: EH - Ecology, Behaviour Impact factor: 0.222, year: 2009

  16. Effectiveness of Vascular Markers (Immunohistochemical Stains) in Soft Tissue Sarcomas.

    Science.gov (United States)

    Naeem, Namra; Mushtaq, Sajid; Akhter, Noreen; Hussain, Mudassar; Hassan, Usman

    2018-05-01

    To ascertain the effectiveness of IHC markers of vascular origin like CD31, CD34, FLI1 and ERG in vascular soft tissue sarcomas including angiosarcomas, Kaposi sarcomas, epithelioid hemangioendothelioma and a non-vascular soft tissue sarcoma (Epithelioid sarcoma). Descriptive study. Shaukat Khanum Memorial Cancer Hospital and Research Centre, Lahore, from 2011 to 2017. Diagnosed cases of angiosarcomas (n=48), epithelioid hemangioendothelioma (n=9), Kaposi sarcoma (n=9) and epithelioid sarcoma (n=20) were selected. Immunohistochemical staining as performed on formalin fixed paraffin embedded sections. The sections were stained for the following markers: CD34 (VENTANA clone Q Bend 10), CD31 (Leica clone 1 A 10), FLI1 (CELL MARQUE clone MRQ-1) and ERG (CELL MARQUE clone EP111). A complete panel of CD34, CD31 and ERG was applied on 8/48 cases of angiosarcomas with triple positivity in 6 cases. Eight cases showed positivity for only CD31 and ERG and 2 cases showed positivity for only ERG. A complete panel of CD34, CD31 and ERG was applied on 3/9 cases of epithelioid hemangioendothelioma with positivity for all markers in 2 cases. Combined positivity for ERG and CD34 was seen in 2 cases and on 4 cases only CD31 immunohistochemical was solely applied with 100% positivity. FLI1 was not applied on any case. Among 9 cases of Kaposi sarcoma, ERG, CD34 and CD31 in combination were applied on only 1 case with triple positivity. Remaining cases show positivity for either CD34, CD31 or FLI1. Majority of cases of epithelioid sarcomas were diagnosed on the basis of cytokeratin and CD34 positivity with loss of INI1. The other vascular markers showed negativity in all cases. Among these four markers, ERG immunohistochemical stain is highly effective for endothelial differentiation due to its specific nuclear staining pattern in normal blood vessel endothelial cells (internal control) as well as neoplastic cells of vascular tumors and lack of background staining.

  17. Detection of radioactively labeled proteins is quenched by silver staining methods: quenching is minimal for 14C and partially reversible for 3H with a photochemical stain

    International Nuclear Information System (INIS)

    Van Keuren, M.L.; Goldman, D.; Merril, C.R.

    1981-01-01

    Silver staining methods for protein detection in polyacrylamide gels have a quenching effect on autoradiography and fluorography. This effect was quantitated for proteins in two-dimensional gels by microdensitometry using a computer equipped with an image processor and by scintillation counting of proteins solubilized from the gels. The original histologically derived silver stain had a quenching effect that was severe and irreversible for 3 H detection and moderate for 14 C detection. A silver stain based on photochemical methods had minimal quenching of 14 C detection and less of a quenching effect than the histological stain for 3 H detection. The 3 H quenching effect was partially reversible for the photochemical stain

  18. The effect of corrosion on stained glass windows

    Directory of Open Access Journals (Sweden)

    Laissner, Johanna

    1996-06-01

    Full Text Available Stained glass windows belong to the most important cultural heritage of Europe. Within the last decades a disastrous deterioration took place. The wonderful stained glass windows and their glass paintings as pieces of art are acutely menaced by environmental corrosive influences. This corrosion process is a very complex reaction which is not only influenced by temperature and humidity changes but also by gaseous pollutants like sulfur dioxide, nitrogen oxides or ozone, by dust and air, microorganisms as well as synergetic interactions. Strongly affected by these environmental attacks are medieval stained glasses due to their chemical composition. They have a low content in silica and high contents of modifier ions (e.g. potassium and calcium. The corrosion phenomena can range from predominantly pitting on the surface to the formation of thick corrosion crusts which are turning the panel opaque and thus reducing strongly the transparency of the windows. In order to set up a conservation and restoration concept, it is necessary to know about the environmental conditions to which the stained glass windows are exposed. For this purpose very corrosion sensitive model glasses (so called glass sensors were developed which have a similar chemical composition as historic stained glasses. They exhibit the same corrosion reactions but react much faster, and are now widely used to estimate corrosive stresses on stained glass windows to give basic information about the corrosive impacts which work on the historic glasses. In this paper principle corrosion mechanisms of stained glass windows and their enhancing factors are discussed. For the evaluation of the environmental impact, the application of glass sensors is demonstrated.

    Las vidrieras coloreadas pertenecen al legado cultural más importante de Europa. En las últimas décadas se ha producido en ellas un desastroso deterioro. Las maravillosas vidrieras coloreadas y sus policromías est

  19. General Staining and Segmentation Procedures for High Content Imaging and Analysis.

    Science.gov (United States)

    Chambers, Kevin M; Mandavilli, Bhaskar S; Dolman, Nick J; Janes, Michael S

    2018-01-01

    Automated quantitative fluorescence microscopy, also known as high content imaging (HCI), is a rapidly growing analytical approach in cell biology. Because automated image analysis relies heavily on robust demarcation of cells and subcellular regions, reliable methods for labeling cells is a critical component of the HCI workflow. Labeling of cells for image segmentation is typically performed with fluorescent probes that bind DNA for nuclear-based cell demarcation or with those which react with proteins for image analysis based on whole cell staining. These reagents, along with instrument and software settings, play an important role in the successful segmentation of cells in a population for automated and quantitative image analysis. In this chapter, we describe standard procedures for labeling and image segmentation in both live and fixed cell samples. The chapter will also provide troubleshooting guidelines for some of the common problems associated with these aspects of HCI.

  20. Calcareous nannofossils and sedimentary facies in the Upper Cretaceous Bozeş Formation (Southern Apuseni Mountains, Romania

    Directory of Open Access Journals (Sweden)

    Ramona Balc

    2012-02-01

    Full Text Available The lithology, sedimentology and biostratigraphy of the Bozes Formation, which crop out in the SE Metaliferi Mountains (Apuseni Mts. have been investigated in order to establish the age of the deposits and the depositional environment. The sedimentary structures and facies are interpreted as indicating a deep-water depositional environment, representing part of a submarine fan lobe. Three facies assemblages have been identified and described. Calcareous nannofossils were used to determine the age of the investigated deposits. The presence of Lucianorhabdus cayeuxii and Calculites obscurus indicates the CC17 biozone, while UC13 Zone is pointed out by the continuous occurrence of Arkhangelskiella cymbiformis and the absence of Broinsonia parca parca. Thus, the age of the studied deposits is Late Santonian -?Early Campanian.

  1. Predicting the yield and quality of winter wheat grown on calcareous chernozem in the lower Don Region

    Directory of Open Access Journals (Sweden)

    Olga Biryukova

    2015-07-01

    Full Text Available Long-term studies have revealed a system of indicators for predicting the yield of winter wheat grown on a calcareous chernozem. It has been established that the prediction and integrated assessment of the yield and quality of grain should be performed with consideration for the balance of macro- and micronutrients in the grain and the above-ground biomass of plants. It has been shown that the contents of protein and gluten in winter wheat grain are mainly determined by the supply of plants with nitrogen and its balance with Mn, Р, Fe, Zn, and K. Possibility of predicting the contents of macro- and micronutrients in wheat grain from the chemical composition of plants at the shooting stage has been revealed.

  2. Pore Size Distribution Influence on Suction Properties of Calcareous Stones in Cultural Heritage: Experimental Data and Model Predictions

    Directory of Open Access Journals (Sweden)

    Giorgio Pia

    2016-01-01

    Full Text Available Water sorptivity symbolises an important property associated with the preservation of porous construction materials. The water movement into the microstructure is responsible for deterioration of different types of materials and consequently for the indoor comfort worsening. In this context, experimental sorptivity tests are incompatible, because they require large quantities of materials in order to statistically validate the results. Owing to these reasons, the development of analytical procedure for indirect sorptivity valuation from MIP data would be highly beneficial. In this work, an Intermingled Fractal Units’ model has been proposed to evaluate sorptivity coefficient of calcareous stones, mostly used in historical buildings of Cagliari, Sardinia. The results are compared with experimental data as well as with other two models found in the literature. IFU model better fits experimental data than the other two models, and it represents an important tool for estimating service life of porous building materials.

  3. Grazing damage to plants and gastropod and grasshopper densities in a CO 2-enrichment experiment on calcareous grassland

    Science.gov (United States)

    Ledergerber, Stephan; Thommen, G. Heinrich; Baur, Bruno

    Plant-herbivore interactions may change as atmospheric CO 2 concentrations continue to rise. We examined the effects of elevated atmospheric CO 2 and CO 2-exposure chambers on the grazing damage to plants, and on the abundances of potential herbivores (terrestrial gastropods and grasshoppers) in a calcareous grassland in the Jura mountains of Switzerland (village of Nenzlingen). Individuals of most plant species examined showed slight grazing damage. However, plots with CO 2 enrichment and plots with ambient atmosphere did not differ in the extent of grazing damage. Similarly, plots with CO 2 enrichment and plots with ambient atmosphere did not differ in either gastropod or grasshopper density. Experimental plots with and without chambers did not differ in the number of gastropods. However, the densities of gastropods and grasshoppers and extent of grazing damage to plants were generally lower in the experimental area than in the grassland outside the experimental field.

  4. Methodology for the elaboration of Natura 2000 sites designation acts in the Walloon Region (Belgium: calcareous grasslands in the Lesse-and-Lomme area

    Directory of Open Access Journals (Sweden)

    Mahy G.

    2005-01-01

    Full Text Available In the Walloon Region (Belgium, 239 sites have been selected to be included in the Natura 2000 network. The next step is to write designation acts in order to legally protect these 221,000 ha. In this pilot study, a designation act was elaborated for a Natura 2000 site of 2,569 ha and located in the Lesse-and-Lomme area within the Calestienne region. Although the site includes 40 ha of calcareous grasslands, characterised by an exceptional flora and fauna, this habitat is very threatened by abandonment and fragmentation.The methodology used to elaborate the designation act is presented with respect to calcareous grassland. Firstly, in spring and summer 2003, an accurate map of natural habitats was produced, with every single patch of calcareous grassland being mapped. Information was also collected in order to evaluate conservation status. Based on this information, conservation status was then assessed with respect to three different criteria: (1 integrity of the cortege species, (2 habitat structure and (3 degradations. Thirdly, the site was divided into objective zones according to the different habitats and species of Community interest found in the site. Hence, an objective zone was delineated for calcareous grasslands. This objective zone was then divided in several management units. Finally, at these different spatial levels (site, objective zone, management unit, management measures were suggested. As a result, in the draft designation act, the target is to maintain or restore 230 ha of calcareous grassland, instead of the existing 40 ha. This ambitious target requires large-scale restoration and an efficient grazing scheme. These will need important resources for their successful implementation

  5. Genome-wide analysis of the sox family in the calcareous sponge Sycon ciliatum: multiple genes with unique expression patterns

    Directory of Open Access Journals (Sweden)

    Fortunato Sofia

    2012-07-01

    Full Text Available Abstract Background Sox genes are HMG-domain containing transcription factors with important roles in developmental processes in animals; many of them appear to have conserved functions among eumetazoans. Demosponges have fewer Sox genes than eumetazoans, but their roles remain unclear. The aim of this study is to gain insight into the early evolutionary history of the Sox gene family by identification and expression analysis of Sox genes in the calcareous sponge Sycon ciliatum. Methods Calcaronean Sox related sequences were retrieved by searching recently generated genomic and transcriptome sequence resources and analyzed using variety of phylogenetic methods and identification of conserved motifs. Expression was studied by whole mount in situ hybridization. Results We have identified seven Sox genes and four Sox-related genes in the complete genome of Sycon ciliatum. Phylogenetic and conserved motif analyses showed that five of Sycon Sox genes represent groups B, C, E, and F present in cnidarians and bilaterians. Two additional genes are classified as Sox genes but cannot be assigned to specific subfamilies, and four genes are more similar to Sox genes than to other HMG-containing genes. Thus, the repertoire of Sox genes is larger in this representative of calcareous sponges than in the demosponge Amphimedon queenslandica. It remains unclear whether this is due to the expansion of the gene family in Sycon or a secondary reduction in the Amphimedon genome. In situ hybridization of Sycon Sox genes revealed a variety of expression patterns during embryogenesis and in specific cell types of adult sponges. Conclusions In this study, we describe a large family of Sox genes in Sycon ciliatum with dynamic expression patterns, indicating that Sox genes are regulators in development and cell type determination in sponges, as observed in higher animals. The revealed differences between demosponge and calcisponge Sox genes repertoire highlight the need to

  6. Enhanced phytoextraction: II. Effect of EDTA and citric acid on heavy metal uptake by Helianthus annuus from a calcareous soil.

    Science.gov (United States)

    Lesage, E; Meers, E; Vervaeke, P; Lamsal, S; Hopgood, M; Tack, F M G; Verloo, M G

    2005-01-01

    High biomass producing plant species, such as Helianthus annuus, have potential for removing large amounts of trace metals by harvesting the aboveground biomass if sufficient metal concentrations in their biomass can be achieved However, the low bioavailability of heavy metals in soils and the limited translocation of heavy metals to the shoots by most high biomass producing plant species limit the efficiency of the phytoextraction process. Amendment of a contaminated soil with ethylene diamine tetraacetic acid (EDTA) or citric acid increases soluble heavy metal concentrations, potentially rendering them more available for plant uptake. This article discusses the effects of EDTA and citric acid on the uptake of heavy metals and translocation to aboveground harvestable plant parts in Helianthus annuus. EDTA was included in the research for comparison purposes in our quest for less persistent alternatives, suitable for enhanced phytoextraction. Plants were grown in a calcareous soil moderately contaminated with Cu, Pb, Zn, and Cd and treated with increasing concentrations of EDTA (0.1, 1, 3, 5, 7, and 10 mmol kg(-1) soil) or citric acid (0.01, 0.05, 0.25, 0.442, and 0.5 mol kg(-1) soil). Heavy metal concentrations in harvested shoots increased with EDTA concentration but the actual amount of phytoextracted heavy metals decreased at high EDTA concentrations, due to severe growth depression. Helianthus annuus suffered heavy metal stress due to the significantly increased bioavailable metal fraction in the soil. The rapid mineralization of citric acid and the high buffering capacity of the soil made citric acid inefficient in increasing the phytoextracted amounts of heavy metals. Treatments that did not exceed the buffering capacity of the soil (heavy metal concentrations. Treatments with high concentrations resulted in a dissolution of the carbonates and compaction of the soil. These physicochemical changes caused growth depression of Helianthus annuus. EDTA and citric

  7. Evaluation of Papanicolaou stain for studying micronuclei in buccal cells under field conditions.

    Science.gov (United States)

    Ayyad, Sohair B A; Israel, Ebenezer; El-Setouhy, Maged; Nasr, Ghada Radwan; Mohamed, Mostafa K; Loffredo, Christopher A

    2006-01-01

    To compare Papanicolaou (Pap) and May-Grünwald Giemsa (MGG) stain as 2 techniques for staining for buccal mucosal cells to detect micronuclei (MN) infield studies. Eighty cytologic smears (2 per individual) were taken from the buccal mucosa of 40 cigarette smokers recruited at a rural village in Egypt. Forty smears were stained with Pap stain and 40 with MGG stain. All were assessed for cellularity and scored for MN. Pap stain was faster and easier to process and transport in the field study than was MGG stain. Regarding MGG smears, bacteria and cell debris masked the MN as compared to Pap smears, in which the fixative destroyed the bacteria and made the cell boundaries clearly demarcated. Using Pap stain, MN were seen easily in transparent cytoplasm. Pap stain is the preferred method infield studies for scoring and detecting MN in cells of buccal mucosa.

  8. WITHDRAWN: Amnioinfusion for meconium-stained liquor in labour.

    Science.gov (United States)

    Hofmeyr, G Justus

    2009-01-21

    Amnioinfusion aims to prevent or relieve umbilical cord compression during labour by infusing a solution into the uterine cavity. It is also thought to dilute meconium when present in the amniotic fluid and so reduce the risk of meconium aspiration. However, it may be that the mechanism of effect is that it corrects oligohydramnios (reduced amniotic fluid), for which thick meconium staining is a marker. The objective of this review was to assess the effects of amnioinfusion for meconium-stained liquor on perinatal outcome. The Cochrane Pregnancy and Childbirth Group trials register (October 2001) and the Cochrane Controlled Trials Register (Issue 3, 2001) were searched. Randomised trials comparing amnioinfusion with no amnioinfusion for women in labour with moderate or thick meconium-staining of the amniotic fluid. Eligibility and trial quality were assessed by one reviewer. Twelve studies, most involving small numbers of participants, were included. Under standard perinatal surveillance, amnioinfusion was associated with a reduction in the following: heavy meconium staining of the liquor (relative risk 0.03, 95% confidence interval 0.01 to 0.15); variable fetal heart rate deceleration (relative risk 0.65, 95% confidence interval 0.49 to 0.88); and reduced caesarean section overall (relative risk 0.82, 95% confidence interval 0.69 to 1.97). No perinatal deaths were reported. Under limited perinatal surveillance, amnioinfusion was associated with a reduction in the following: meconium aspiration syndrome (relative risk 0.24, 95% confidence interval 0.12 to 0.48); neonatal hypoxic ischaemic encephalopathy (relative risk 0.07, 95% confidence interval 0.01 to 0.56) and neonatal ventilation or intensive care unit admission (relative risk 0.56, 95% confidence interval 0.39 to 0.79); there was a trend towards reduced perinatal mortality (relative risk 0.34, 95% confidence interval 0.11 to 1.06). Amnioinfusion is associated with improvements in perinatal outcome

  9. Machine vision system for automated detection of stained pistachio nuts

    Science.gov (United States)

    Pearson, Tom C.

    1995-01-01

    A machine vision system was developed to separate stained pistachio nuts, which comprise of about 5% of the California crop, from unstained nuts. The system may be used to reduce labor involved with manual grading or to remove aflatoxin contaminated product from low grade process streams. The system was tested on two different pistachio process streams: the bi- chromatic color sorter reject stream and the small nut shelling stock stream. The system had a minimum overall error rate of 14% for the bi-chromatic sorter reject stream and 15% for the small shelling stock stream.

  10. Weathering effects on materials from historical stained glass windows

    Directory of Open Access Journals (Sweden)

    García-Heras, M.

    2003-06-01

    Full Text Available A selection of materials (stained glasses, lead cames, support elements and putty from historical stained glass windows of different periods (13th-19th centuries have been studied. Optical microscopy, scanning electron microscopy, energy dispersive X-ray spectrometry and X-ray diffraction were used as characterization techniques. Degradation of historical stained glass windows is due to the particular chemical composition oftlie materials used for their production: stained glasses, lead network, metallic support elements and refilling putty. However, the presence of a given chemical composition is not the only factor involved in the degradation process. It is necessary the occurrence of other external factors that contribute to the development and progress of alteration problems in the materials mentioned above. The presence of gaseous pollution in the air produces a negative interaction with the surface of the stained glass windows materials. Firstly, the stained glasses and the grisailles begin a dealkalinisation process and a silica gel layer is formed during the early contact between the glasses and the wet environment. After that, insoluble salt deposits and corrosion crusts are formed as a consequence of a deeper chemical attack which results in a depolymerisation of the glass network. The lead cames and the metallic support elements are also altered by weathering. Such materials are oxidized and both pits and crusts appear on their surfaces. The transport of ions and other substances from the corrosion crusts of the metallic elements gives rise new deposits upon the stained glasses, which could intensify their own degradation processes. The putty experiments a noticeable shrinkage and cracking. Likewise, adverse environmental conditions favour the transport of putty substances towards the other materials of the stained glass window, thereby increasing the crusts thickness and adding elements that contribute to the total alteration of the

  11. Assisted Living

    Science.gov (United States)

    ... a resident's needs depends as much on the philosophy and services of the assisted living facility as it does on the quality of care. The Administration on Aging, a part of the U.S. Department of Health and Human Services (HHS), offers these suggestions to help you ...

  12. Easier living?

    DEFF Research Database (Denmark)

    Høholt, Stine

    2005-01-01

    I ph.d.-projektet: "Easier Living? Streamline design og den æstetiserede livsverden" analyseres 1930'ernes Streamline-bevægelse, som tilhører den amerikanske modernisme inden for industrielt produktdesign. Bevægelsens glatte, strømlinede produkter bliver med deres enorme udbredelse det historiske...

  13. Immunogold staining procedure for the localisation of regulatory peptides.

    Science.gov (United States)

    Varndell, I M; Tapia, F J; Probert, L; Buchan, A M; Gu, J; De Mey, J; Bloom, S R; Polak, J M

    1982-01-01

    The use of protein A- and IgG-conjugated colloidal gold staining methods for the immuno-localisation of peptide hormones and neurotransmitters at light- and electron microscope level are described and discussed. Bright-field and dark-ground illumination modes have been used to visualise the gold-labelled antigenic sites at the light microscope level. Immunogold staining procedures at the ultrastructural level using region-specific antisera have been adopted to localise specific molecular forms of peptides including gastrin (G17 and G34), glucagon and pro-glucagon, insulin and pro-insulin, in normal tissue and in tumours of the gastroenteropancreatic system. Similar methods have been used to demonstrate the heterogeneity of p-type nerves in the enteric nervous system. Vasoactive intestinal polypeptide (VIP) has been localised to granular sites (mean +/- S.D. granule diameter = 98 +/- 19 nm) in nerve terminals of the enteric plexuses and in tumour cells of diarrhoeogenic VIP-producing neoplasias (mean +/- S.D. granule diameter = 126 +/- 37 nm) using immunogold procedures applied to ultraviolet-cured ultrathin sections. Co-localisation of amines and peptides in carotid body type I cells and in chromaffin cells of normal adrenal medulla and phaeochromocytomas has also been demonstrated. Advantages of the immunogold procedures over alternative immunocytochemical techniques are discussed.

  14. Authenticity screening of stained glass windows using optical spectroscopy

    Science.gov (United States)

    Meulebroeck, Wendy; Wouters, Hilde; Nys, Karin; Thienpont, Hugo

    2016-11-01

    Civilized societies should safeguard their heritage as it plays an important role in community building. Moreover, past technologies often inspire new technology. Authenticity is besides conservation and restoration a key aspect in preserving our past, for example in museums when exposing showpieces. The classification of being authentic relies on an interdisciplinary approach integrating art historical and archaeological research complemented with applied research. In recent decades analytical dating tools are based on determining the raw materials used. However, the traditional applied non-portable, chemical techniques are destructive and time-consuming. Since museums oftentimes only consent to research actions which are completely non-destructive, optical spectroscopy might offer a solution. As a case-study we apply this technique on two stained glass panels for which the 14th century dating is nowadays questioned. With this research we were able to identify how simultaneous mapping of spectral signatures measured with a low cost optical spectrum analyser unveils information regarding the production period. The significance of this research extends beyond the re-dating of these panels to the 19th century as it provides an instant tool enabling immediate answering authenticity questions during the conservation process of stained glass, thereby providing the necessary data for solving deontological questions about heritage preservation.

  15. Color stability and staining of silorane after prolonged chemical challenges

    DEFF Research Database (Denmark)

    de Jesus, Vivian CBR; Martinelli, Nata Luiz; Poli-Frederico, Regina Célia

    Objectives: The purpose of this study was to investigate the effect of prolonged chemical challenges on color stability and staining susceptibility of a silorane-based composite material when compared to methacrylate-based composites. Methods: Cylindrical specimens (n=24) were fabricated from...... methacrylate (Filtek Z250, 3M ESPE; Filtek Z350XT, 3M ESPE; Master Fill, Biodinâmica) or silorane-based (Filtek P90, 3M ESPE) composite materials. Initial color was registered in a spectrophotometer. Specimens were divided in four groups and individually stored at 37°C in 0.02N citric acid, 0.02N phosphoric...... acid, 75% ethanol or distilled water (control) for 7, 14, 21, and 180 days, when new measurements were performed. A staining test was performed (n=12) after 21 days of chemical challenge by immersion in coffee during 3 weeks at 37°C. Color changes (¿E) were characterized using the CIEL*a*b* color...

  16. Analysis of surface stains on modern gold coins

    Energy Technology Data Exchange (ETDEWEB)

    Corregidor, V., E-mail: vicky.corregidor@itn.pt [Instituto Tecnológico e Nuclear, Instituto Superior Técnico, Universidade Técnica de Lisboa, E.N. 10, 2686-953 Sacavém (Portugal); CFNUL, Av. Prof. Gama Pinto 2, 1649-003 Lisboa (Portugal); Alves, L.C. [Instituto Tecnológico e Nuclear, Instituto Superior Técnico, Universidade Técnica de Lisboa, E.N. 10, 2686-953 Sacavém (Portugal); CFNUL, Av. Prof. Gama Pinto 2, 1649-003 Lisboa (Portugal); Cruz, J. [Instituto Tecnológico e Nuclear, Instituto Superior Técnico, Universidade Técnica de Lisboa, E.N. 10, 2686-953 Sacavém (Portugal); CFNUL, Av. Prof. Gama Pinto 2, 1649-003 Lisboa (Portugal); Dep. Física, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, 2829-216 Caparica (Portugal)

    2013-07-01

    It is a mandatory practice in the European Mint Houses to provide a certificate of guarantee of their products specially when issuing commemorative gold or silver coins. This practise should assure satisfaction and trust both for the mint house and for the demanding numismatic collector. For these reasons the Mint Houses follow a strict quality control in all the production steps in order to ensure a no-defect, fully supervised output. In spite of all the undertaken precautions, different surface stains with diverse origin on gold coins recently minted in Europe were observed. Those were compositionally studied by means of IBA techniques at the end-stage nuclear microprobe installed at IST/ITN. From this study it was possible to identify several possible sources for these stains. The presence of defects at the surface of these commemorative coins address the need of improving the quality control system and the results here presented point out where these improvements should occur, in order to reduce/eliminate them and give the customer a product that with time probably will be revalued.

  17. Color stability of ceramic brackets immersed in potentially staining solutions.

    Science.gov (United States)

    Guignone, Bruna Coser; Silva, Ludimila Karsbergen; Soares, Rodrigo Villamarim; Akaki, Emilio; Goiato, Marcelo Coelho; Pithon, Matheus Melo; Oliveira, Dauro Douglas

    2015-01-01

    To assess the color stability of five types of ceramic brackets after immersion in potentially staining solutions. Ninety brackets were divided into 5 groups (n = 18) according to brackets commercial brands and the solutions in which they were immersed (coffee, red wine, coke and artificial saliva). The brackets assessed were Transcend (3M/Unitek, Monrovia, CA, USA), Radiance (American Orthodontics, Sheboygan, WI, USA), Mystique (GAC International Inc., Bohemia, NY, USA) and Luxi II (Rocky Mountain Orthodontics, Denver, CO, USA). Chromatic changes were analyzed with the aid of a reflectance spectrophotometer and by visual inspection at five specific time intervals. Assessment periods were as received from the manufacturer (T0), 24 hours (T1), 72 hours (T2), as well as 7 days (T3) and 14 days (T4) of immersion in the aforementioned solutions. Results were submitted to statistical analysis with ANOVA and Bonferroni correction, as well as to a multivariate profile analysis for independent and paired samples with significance level set at 5%. The duration of the immersion period influenced color alteration of all tested brackets, even though these changes could not always be visually observed. Different behaviors were observed for each immersion solution; however, brackets immersed in one solution progressed similarly despite minor variations. Staining became more intense over time and all brackets underwent color alterations when immersed in the aforementioned solutions.

  18. Stained glasses under the nuclear microprobe: A window into history

    Energy Technology Data Exchange (ETDEWEB)

    Vilarigues, M. [Dep. de Conservacao e Restauro and R and D Unit Vidro e da Ceramica Para as Artes, FCT-UNL, Quinta da Torre, 2829-516 Caparica (Portugal)], E-mail: mgv@fct.unl.pt; Fernandes, P. [Dep. de Conservacao e Restauro and R and D Unit Vidro e da Ceramica Para as Artes, FCT-UNL, Quinta da Torre, 2829-516 Caparica (Portugal); Alves, L.C.; Silva, R.C. da [Dep. Fisica, LFI, ITN, E.N.10, 2686-953 Sacavem (Portugal)

    2009-06-15

    Stained glass fragments from the 15th, 16th and 20th centuries, belonging to Mosteiro de Santa Maria da Vitoria, Batalha (Portugal), were characterised non-destructively in a nuclear microprobe. The work aimed at finding the composition of the glasses and glass paintings and relating these with the corresponding production periods. The elemental compositions of the glass fragments were obtained by means of scanning micro-beam Particle Induced X-ray Emission ({mu}-PIXE) spectrometry in selected cross-sections. These were complemented by micro X-Ray fluorescence spectrometry. Characterisation of colour was performed by optical absorption spectroscopy in the UV-vis range, while the corrosion products were identified by optical microscopy and {mu}-FTIR (Fourier Transform Infra Red) spectroscopy in combination with the data generated by {mu}-PIXE. Nuclear microprobe analysis allowed unveiling the compositions and structures, in particular of glass paintings and corrosion products. While it is not surprising that Fe, Cu and Pb were the main elements identified in the grisaille paintings of all studied periods, as well as Ag and Cu found in the glasses decorated with yellow silver painting, their distribution gave important clues on the materials and techniques used to manufacture these stained glasses. Furthermore, it allowed establishing a definite relation between the compositions found and the periods of production, with the added bonus of correctly reassigning the manufacturing period of some samples.

  19. Color stability of ceramic brackets immersed in potentially staining solutions

    Directory of Open Access Journals (Sweden)

    Bruna Coser Guignone

    2015-08-01

    Full Text Available OBJECTIVE: To assess the color stability of five types of ceramic brackets after immersion in potentially staining solutions.METHODS: Ninety brackets were divided into 5 groups (n = 18 according to brackets commercial brands and the solutions in which they were immersed (coffee, red wine, coke and artificial saliva. The brackets assessed were Transcend (3M/Unitek, Monrovia, CA, USA, Radiance (American Orthodontics, Sheboygan, WI, USA, Mystique (GAC International Inc., Bohemia, NY, USA and Luxi II (Rocky Mountain Orthodontics, Denver, CO, USA. Chromatic changes were analyzed with the aid of a reflectance spectrophotometer and by visual inspection at five specific time intervals. Assessment periods were as received from the manufacturer (T0, 24 hours (T1, 72 hours (T2, as well as 7 days (T3 and 14 days (T4 of immersion in the aforementioned solutions. Results were submitted to statistical analysis with ANOVA and Bonferroni correction, as well as to a multivariate profile analysis for independent and paired samples with significance level set at 5%.RESULTS: The duration of the immersion period influenced color alteration of all tested brackets, even though these changes could not always be visually observed. Different behaviors were observed for each immersion solution; however, brackets immersed in one solution progressed similarly despite minor variations.CONCLUSIONS: Staining became more intense over time and all brackets underwent color alterations when immersed in the aforementioned solutions.

  20. Coproduction of detergent compatible bacterial enzymes and stain removal evaluation.

    Science.gov (United States)

    Niyonzima, Francois N; More, Sunil S

    2015-10-01

    Most of the detergents that are presently produced contain the detergent compatible enzymes to improve and accelerate the washing performance by removing tough stains. The process is environment friendly as the use of enzymes in the detergent formulation reduces the utilization of toxic detergent constituents. The current trend is to use the detergent compatible enzymes that are active at low and ambient temperature in order to save energy and maintain fabric quality. As the detergent compatible bacterial enzymes are used together in the detergent formulation, it is important to co-produce the detergent enzymes in a single fermentation medium as the enzyme stability is assured, and production cost gets reduced enormously. The review reports on the production, purification, characterization and application of detergent compatible amylases, lipases, and proteases are available. However, there is no specific review or minireview on the concomitant production of detergent compatible amylases, lipases, and proteases. In this minireview, the coproduction of detergent compatible enzymes by bacterial species, enzyme stability towards detergents and detergent components, and stain release analysis were discussed. © 2015 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

  1. Ophiolitic detritus in Kimmeridgian resedimented limestones and its provenance from an eroded obducted ophiolitic nappe stack south of the Northern Calcareous Alps (Austria

    Directory of Open Access Journals (Sweden)

    Gawlick Hans-Jürgen

    2015-12-01

    Full Text Available The causes for the Middle to Late Jurassic tectonic processes in the Northern Calcareous Alps are still controversially discussed. There are several contrasting models for these processes, formerly designated “Jurassic gravitational tectonics”. Whereas in the Dinarides or the Western Carpathians Jurassic ophiolite obduction and a Jurassic mountain building process with nappe thrusting is widely accepted, equivalent processes are still questioned for the Eastern Alps. For the Northern Calcareous Alps, an Early Cretaceous nappe thrusting process is widely favoured instead of a Jurassic one, obviously all other Jurassic features are nearly identical in the Northern Calcareous Alps, the Western Carpathians and the Dinarides. In contrast, the Jurassic basin evolutionary processes, as best documented in the Northern Calcareous Alps, were in recent times adopted to explain the Jurassic tectonic processes in the Carpathians and Dinarides. Whereas in the Western Carpathians Neotethys oceanic material is incorporated in the mélanges and in the Dinarides huge ophiolite nappes are preserved above the Jurassic basin fills and mélanges, Jurassic ophiolites or ophiolitic remains are not clearly documented in the Northern Calcareous Alps. Here we present chrome spinel analyses of ophiolitic detritic material from Kimmeridgian allodapic limestones in the central Northern Calcareous Alps. The Kimmeridgian age is proven by the occurrence of the benthic foraminifera Protopeneroplis striata and Labyrinthina mirabilis, the dasycladalean algae Salpingoporella pygmea, and the alga incertae sedis Pseudolithocodium carpathicum. From the geochemical composition the analysed spinels are pleonastes and show a dominance of Al-chromites (Fe3+–Cr3+–Al3+ diagram. In the Mg/(Mg+ Fe2+ vs. Cr/(Cr+ Al diagram they can be classified as type II ophiolites and in the TiO2 vs. Al2O3 diagram they plot into the SSZ peridotite field. All together this points to a harzburgite

  2. The first marine record of the Bartonian Nummulites and Calcareous nannofossils at the Tihoiyeh section of the Jiroft area (Central Iran)

    Science.gov (United States)

    Hadi, Mehdi; Parandavar, Mohammad; Kiani-Shahvandi, Madineh; Dabaghi Sadr, Fatemeh

    2016-04-01

    The studied shallow marine sediments are situated south and southwest of Jiroft town, 180 km south of Keman, from the Tihoiyeh section (near Tihoiyeh village). These deposits at the top of the section include marly limestones with index Nummulites species such as N. perforatus (De Montfort), N. lyelli (D'Archiac and Haime). According to Schaub's nummulitic time scale (1981) and shallow benthic zonation of Serra-Kiel et al. (1998), this interval referred to Bartonian age and SBZ17 zone, respectively. Also, the calcareous nannofossil study on this interval led to identification of 19 well-preserved species belonging to 11 genera of this plankton group. Based on determined index calcareous nannofossiltaxa such as Reticulofenestra bisecta, Sphenolithus obtusus, Sphenolithus intercalaris, Cribrocentrum erbae and associated species such as Sphenolithus pseudoradians, Reticulofenestra wadeae, Cribrocentrum reticulatum and Blackites spinosus this interval assigned to the CNE15 zone of Agnini et al. (2014) that corresponds to upper part of NP16 and lower part of NP17 zones of Martini (1971). It is resulted that, the detected shallow benthic foraminifera zone, corresponds to the calcareous nannofossil zones both indicating Bartonian age. Keywords: Bartonian, Calcareous nannofossil, Nummulites, Central Iran, Tihoiyeh section. References: Agnini, C., Fornaciari, E., Raffi, I, Rita Catanzariti, R., Palike, H., Backman, J. and Rio, D., 2014. Biozonation and biochronology of Paleogene calcareous nannofossils from low and middle latitudes. Newsletters on Stratigraphy, Vol. 47 (2), Pp. 131-181. Martini, E., 1971. Standard Tertiary and Quaternary calcareous nannoplankton zonation. In: Farinacci, A. (Ed.), Proceedings 2nd International Conference Planktonic Microfossils Roma: Rome (Ed. Tecnosci.), 2, Pp. 739-785. Serra-Kiel, J., Hottinger, L., Caus, E., Drobne, K., Fernandez, C., Jauhri, A.K., Less, G., Pavlovec, R., Pignatti, J., Samso, J.M., Schaub, H., Sirel, E., Strougo, A

  3. Austrian Lives

    OpenAIRE

    Bischof, Günter; Plasser, Fritz; Maltschnig, Eva

    2012-01-01

    Writing biographies for a long time had been a male hegemonic project. Ever since Plutarch and Sueton composed their vitae of the greats of classical antiquity, to the medieval obsession with the hagiographies of holy men (and a few women) and saints, Vasari's lives of great Renaissance artists, down to the French encyclopedists, Dr. Johnson and Lytton Strachey, as well as Ranke and Droysen the genre of biographical writing has become increasingly more refined. In the twentieth century male p...

  4. Comparison of Gram and Kopeloff stains in the diagnosis of bacterial vaginosis in pregnancy.

    Science.gov (United States)

    Libman, Michael D; Kramer, Michael; Platt, Robert

    2006-03-01

    Bacterial vaginosis (BV) is commonly diagnosed by using the Nugent score, a semiquantitative scoring system to evaluate bacterial morphotypes on Gram stain of vaginal secretions. Some authors have suggested using the Kopeloff modification of the Gram stain. Asymptomatic BV in pregnancy has been associated with adverse outcomes. We performed both stains on simultaneously collected vaginal smears from 2652 women at 24-26 weeks of gestation. Gram staining gave significantly higher (more abnormal) Nugent scores than Kopeloff staining. Compared to the Kopeloff stain, the number of specimens graded as indeterminate or consistent with BV by Gram stain increased by 29% (469 versus 364, Pstaining was significantly better than Gram staining (agreement=74% versus 63%, intraclass correlation coefficient=0.87 versus 0.79, P<.05, 95% confidence intervals 0.85-0.89 and 0.75-0.82, respectively).

  5. Effectiveness of clean-up procedures on stain susceptibility of different orthodontic adhesives

    Directory of Open Access Journals (Sweden)

    Swati Pundlik Mane

    2014-01-01

    Conclusion: Chemical-cure adhesive showed higher stain susceptibility than light-cure adhesive in all clean-up procedures. Both adhesives would show less stain susceptibility with polishing step with rubber cup and pumice.

  6. Improved Nissl method to stain formaldehyde or glutaraldehyde-fixed material.

    Science.gov (United States)

    Böck, P

    1979-05-15

    Nissl staining of paraffin sections from formaldehyde- or glutaraldehyde-fixed specimens is significantly intensified when sections are kept in a 50% (w/v) aqueous solution of potassium metabisulfite before being stained by a conventional Nissl method.

  7. Maternal and fetal characteristics associated with meconium-stained amniotic fluid

    DEFF Research Database (Denmark)

    Balchin, Imelda; Whittaker, John C; Lamont, Ronald F

    2011-01-01

    To estimate the rates of meconium-stained amniotic fluid (AF) and adverse outcome in relation to gestational age and racial group, and to investigate the predictors of meconium-stained AF.......To estimate the rates of meconium-stained amniotic fluid (AF) and adverse outcome in relation to gestational age and racial group, and to investigate the predictors of meconium-stained AF....

  8. [Automated analysis of bacterial preparations manufactured on automatic heat fixation and staining equipment].

    Science.gov (United States)

    2012-01-01

    Heat fixation of preparations was made in the fixation bath designed by EMKO (Russia). Programmable "Emkosteiner" (EMKO, Russia) was used for trial staining. Reagents set Micko-GRAM-NITsF was applied for Gram's method of staining. It was demostrated that automatic smear fixation equipment and programmable staining ensure high-quality imaging (1% chromaticity variation) good enough for standardization of Gram's staining of microbial preparations.

  9. Indirect immunofluorescence staining of Chlamydia trachomatis inclusions in microculture plates with monoclonal antibodies.

    Science.gov (United States)

    Zapata, M; Chernesky, M; Mahony, J

    1984-06-01

    Indirect immunofluorescence (IF) staining, using a monoclonal antibody, detected two- to fourfold more inclusions than did iodine staining. Of 274 clinical specimens, 53 (19.3%) were positive by IF on passage 1 as compared with 33 (12%) by iodine staining (P less than 0.005). IF-stained inclusions in McCoy cells in the bottom of microculture wells were readily viewed with a long-focal-length objective at a magnification of 250 X.

  10. Indirect immunofluorescence staining of Chlamydia trachomatis inclusions in microculture plates with monoclonal antibodies.

    OpenAIRE

    Zapata, M; Chernesky, M; Mahony, J

    1984-01-01

    Indirect immunofluorescence (IF) staining, using a monoclonal antibody, detected two- to fourfold more inclusions than did iodine staining. Of 274 clinical specimens, 53 (19.3%) were positive by IF on passage 1 as compared with 33 (12%) by iodine staining (P less than 0.005). IF-stained inclusions in McCoy cells in the bottom of microculture wells were readily viewed with a long-focal-length objective at a magnification of 250 X.

  11. Conjugates of a Photoactivated Rhodamine with Biopolymers for Cell Staining

    Science.gov (United States)

    Zaitsev, Sergei Yu.; Shaposhnikov, Mikhail N.; Solovyeva, Daria O.; Solovyeva, Valeria V.; Rizvanov, Albert A.

    2014-01-01

    Conjugates of the photoactivated rhodamine dyes with biopolymers (proteins, polysaccharides, and nucleic acids) are important tools for microscopic investigation of biological tissue. In this study, a precursor of the photoactivated fluorescent dye (PFD) has been successfully used for staining of numerous mammalian cells lines and for conjugate formation with chitosan (“Chitosan-PFD”) and histone H1 (“Histone H1.3-PFD”). The intensive fluorescence has been observed after photoactivation of these conjugates inside cells (A431, HaCaT, HEK239, HBL-100, and MDCK). Developed procedures and obtained data are important for further application of novel precursors of fluorescent dyes (“caged” dyes) for microscopic probing of biological objects. Thus, the synthesized “Chitosan-PFD” and “Histone H1-PFD” have been successfully applied in this study for intracellular transport visualization by fluorescent microscopy. PMID:25383365

  12. Role of cytochemical staining in diagnosis of monocytic leukemia

    International Nuclear Information System (INIS)

    Wei Yan; Yan Chenhua; Shi Huilin; Liu Yanrong; Qiu Jingying; Jiang Bing; Wang Debing

    2005-01-01

    Objective: To explore the role of cytochemical staining in MIC(morphology ,immunology and cytogenetics) typing of acute monocytic leukemia (AML-M5) and acute myelomonocytic leukemia (AML-M4). Methods: The authors analyzed the characteristics of morphology, immunology and cytogenetics in 47 cases of diagnosed AML. Results: Eventually, they were diagnosed with MIC. There were 25 cases with AML-M5, 19 cases with AML-M4(consisted of 5 cases diagnosed AML-M4Eo), 2 cases with acute myeloid leukemia with t(8:21) and 1 case with T-ALL. Conclusions: During MIC typing of AML-M4 and AML-M5, the diagnostic value of morphology remains important, for immunophenotype, cytogenetics and morphology are interdependent. Immunophenotype and cytogenetics are necessary for improvement of the accuracy rate of diagnosis. (authors)

  13. PHACE syndrome misdiagnosed as a port-wine stain.

    Science.gov (United States)

    Thomson, Jason; Greig, Aina; Lloyd, Claire; Morrison, Danny; Flohr, Carsten

    2015-07-15

    We present the case of a boy born with a large macular, segmental vascular anomaly over the left face, initially diagnosed as a capillary malformation (port-wine stain) by the postnatal paediatric team. The vascular anomaly in the face then grew rapidly during the first few weeks of life and started to occlude the left eye, causing parental concerns about the infant's vision. A dermatological opinion established that the lesion was a segmental infantile haemangioma (IH). This, in combination with the posterior fossa malformation previously detected on antenatal scanning and confirmed by an MRI postnatally, satisfied the criteria for Posterior fossa abnormalities, Haemangiomas, Arterial abnormalities, Cardiac abnormalities and Eye abnormalities (PHACE) syndrome: a rare cutaneous neurovascular syndrome. This case highlights the diagnostic challenge posed by early phenotypes of haemangiomas as well as the importance of correctly diagnosing PHACE syndrome. 2015 BMJ Publishing Group Ltd.

  14. Surface discoloration of composite resins: Effects of staining and bleaching.

    Science.gov (United States)

    Poggio, Claudio; Beltrami, Riccardo; Scribante, Andrea; Colombo, Marco; Chiesa, Marco

    2012-09-01

    The purpose of this in vitro study was to evaluate surface discoloration of three microhybrid composite resins (Esthet•X HD, Clearfil AP-X, Gradia Direct) and five nanohybrid composite resins (Ceram•X, GC Kalore, G-aenial, Grandio, GrandioSO), after staining and bleaching procedures. The composite resins were polymerized with a curing light (Celalux II, Voco, Cuxhaven, Germany) into 160 silicon molds (6,4 mm in diameter and 2 mm in thickness) to obtain identical specimens. Twenty samples for each composite resin were prepared. The specimens were polished using an automated polishing machine with the sequence of 600-, 800-, 1000-grit abrasive paper under water irrigation. The specimens were immersed in tea and distilled water: the specimens were dipped for 20 min, once a day (every 24 h), for 14 days into the drinks. The specimens were then bleached with carbamide peroxide at 17% (Perfect Bleach-Voco). The color of specimens was measured with a spectrophotometer according to the CIE L(*)a(*)b(*) system after light-polymerization of composite resin specimens, after 7 days, after 14 days, and after bleaching. The color difference h index (DEab(*)) between each measurement was calculated. Statistical analysis was made using analysis of variance (ANOVA). All specimens showed a significant increase in staining with a similar trend and no significant differences between microhybrid and nanohybrid composite resins. After whitening procedures, materials tested showed both significant and unsignificant differences of the h index. Microhybrid and nanohybrid composite resins had similar in vitro surface discoloration in tea. After bleaching, discoloration was removed from some composite resins tested.

  15. Digital simulation of staining in histopathology multispectral images: enhancement and linear transformation of spectral transmittance.

    Science.gov (United States)

    Bautista, Pinky A; Yagi, Yukako

    2012-05-01

    Hematoxylin and eosin (H&E) stain is currently the most popular for routine histopathology staining. Special and/or immuno-histochemical (IHC) staining is often requested to further corroborate the initial diagnosis on H&E stained tissue sections. Digital simulation of staining (or digital staining) can be a very valuable tool to produce the desired stained images from the H&E stained tissue sections instantaneously. We present an approach to digital staining of histopathology multispectral images by combining the effects of spectral enhancement and spectral transformation. Spectral enhancement is accomplished by shifting the N-band original spectrum of the multispectral pixel with the weighted difference between the pixel's original and estimated spectrum; the spectrum is estimated using M transformed to the spectral configuration associated to its reaction to a specific stain by utilizing an N × N transformation matrix, which is derived through application of least mean squares method to the enhanced and target spectral transmittance samples of the different tissue components found in the image. Results of our experiments on the digital conversion of an H&E stained multispectral image to its Masson's trichrome stained equivalent show the viability of the method.

  16. A Comparison of Heat versus Methanol Fixation for Gram Staining Bacteria

    Science.gov (United States)

    Minnerath, Jeanne M.; Roland, Jenna M.; Rossi, Lucas C.; Weishalla, Steven R.; Wolf, Melissa M.

    2009-01-01

    Gram staining bacteria is a fundamental technique introduced in general biology and microbiology laboratory courses. Two common problems students encounter when Gram staining bacteria are (1) having a difficult time locating bacterial cells on the microscope slide and (2) over-decolorizing bacterial cells during the staining procedure such that…

  17. Age estimation of blood stains by hemoglobin derivative determination using reflectance spectroscopy

    NARCIS (Netherlands)

    Bremmer, Rolf H.; Nadort, Annemarie; van Leeuwen, Ton G.; van Gemert, Martin J. C.; Aalders, Maurice C. G.

    2011-01-01

    Blood stains can be crucial in reconstructing crime events. However, no reliable methods are currently available to establish the age of a blood stain on the crime scene. We show that determining the fractions of three hemoglobin derivatives in a blood stain at various ages enables relating these

  18. Ultrastructural characters of a Physarum melleum on living leaves of Dendrobium candidum in China*

    Science.gov (United States)

    Zhang, Jing-ze; Liu, Lu-ning; Fiore-Donno, Anna-Maria; Xu, Tong

    2007-01-01

    A known species, Physarum melleum, was found fruiting on living leaves of Dendrobium candidum, which was collected in China in 2004. Its morphological characters were revealed by light microscopy (LM), environmental scanning electron microscopy (ESEM) and scanning electron microscopy (SEM). Character variations were distinguished by its olive-yellow peridium and its always thinner capillitium containing globulose granular material between the large calcareous nodes. The calcium carbonate granules, deposited on stalks, peridium and hypothallus as well as within stalks, were globose and smooth. PMID:18257124

  19. Novel Approach of Differential Staining to Detect Necrotic Cells in Preimplantation Embryos

    Directory of Open Access Journals (Sweden)

    Mohammad Hossein Nasr Esfahani

    2007-01-01

    Full Text Available Background: This novel approach describes a rapid and simple method for identification of necrotic vs. viable cells within a mammalian blastocyst.Materials and Methods: Hatched bovine blastocysts produced in vitro were first incubated for 30 min in pre-equilibrated culture medium containing propidium iodide (PI; 300μg/ml and bisbenzimide (Hoechst: H33342; 5μg/ml fluorescent dyes. Embryos were then freed from residual dyes by thoroughly washing in warm phosphate buffer saline free of calcium and magnesium (PBS-, fixed in 2.5% glutharaldehyde and washed again in PBS- . Stained embryos afterwards were mounted in a drop of glycerol over a microscopic slide. Prepared samples were examined under an epifluorescent microscope using the same excitation wavelength (330-385nm and barrier filter (400nm to distinguish necrosed vs. viable blastomers as being appeared in red and blue, respectively.Results: Obtained results showed that in cells with altered cell membrane such as late apoptotic or necrotic cells, PI and H33342 readily enter through the cytoplasmic barriers and so the chromatin materials are stained by both, but since PI quenches bisbenzimide fluorescence, necrotic blastomeres are seen in red to pinky red, while live cells are seen just as blue.Conclusion: Obtained results clearly indicated that this novel approach can be used as a simple, feasible and precise method for every embryology lab and with all the mammalian blastocysts produced either in vitro or in vivo. The basic assay can be completed in 60 min, and valuable and reliable information can be obtained about the quality of the embryos.

  20. What do results of common sequential fractionation and single-step extractions tell us about P binding with Fe and Al compounds in non-calcareous sediments?

    Czech Academy of Sciences Publication Activity Database

    Jan, Jiří; Borovec, Jakub; Kopáček, Jiří; Hejzlar, Josef

    2013-01-01

    Roč. 47, č. 2 (2013), s. 547-557 ISSN 0043-1354 R&D Projects: GA ČR(CZ) GA206/09/1764; GA MZe(CZ) QH81012; GA MZe(CZ) QI102A265 Institutional support: RVO:60077344 Keywords : sequential fractionation * ascorbate and oxalate extration * non-calcareous sediments Subject RIV: DA - Hydrology ; Limnology Impact factor: 5.323, year: 2013

  1. Evaluation of the potential of indigenous calcareous shale for neutralization and removal of arsenic and heavy metals from acid mine drainage in the Taxco mining area, Mexico.

    Science.gov (United States)

    Romero, F M; Núñez, L; Gutiérrez, M E; Armienta, M A; Ceniceros-Gómez, A E

    2011-02-01

    In the Taxco mining area, sulfide mineral oxidation from inactive tailings impoundments and abandoned underground mines has produced acid mine drainage (AMD; pH 2.2-2.9) enriched in dissolved concentrations (mg l⁻¹) sulfate, heavy metals, and arsenic (As): SO₄²⁻ (pH 1470-5454), zinc (Zn; 3.0-859), iron (Fe; pH 5.5-504), copper (Cu; pH 0.7-16.3), cadmium (Cd; pH 0.3-6.7), lead (Pb; pH acid-neutralizing potential of limestone decreases when surfaces of the calcite particles become less reactive as they are progressively coated by metal precipitates. This study constitutes first-stage development of passive-treatment systems for treating AMD in the Taxco mine area using indigenous calcareous shale. This geologic material consists of a mixture of calcite, quartz, muscovite, albite, and montmorillonite. Results of batch leaching test indicate that calcareous shale significantly increased the pH (to values of 6.6-7.4) and decreased heavy metal and As concentrations in treated mine leachates. Calcareous shale had maximum removal efficiency (100%) for As, Pb, Cu, and Fe. The most mobile metals ions were Cd and Zn, and their average percentage removal was 87% and 89%, respectively. In this natural system (calcareous shale), calcite provides a source of alkalinity, whereas the surfaces of quartz and aluminosilicate minerals possibly serve as a preferred locus of deposition for metals, resulting in the neutralizing agent (calcite) beings less rapidly coated with the precipitating metals and therefore able to continue its neutralizing function for a longer time.

  2. Calcareous nannofossil assemblages across the Pliensbachian/Toarcian boundary at the Peniche section (Ponta do Trovão, Lusitanian Basin)

    OpenAIRE

    Mailliot, S.; Elmi, S.; Mattioli, E.; Pittet, B.

    2007-01-01

    The Peniche section has revealed moderately-to-well preserved calcareous nannofossil assemblages across the Pliensbachian/Toarcian boundary. This good record has allowed the proposition of a refined biostratigraphic scheme. The stage boundary, as defined by ammonites, is comprised within the NJ5b C. impontus (NW Europe; BOWN & COOPER, 1998) or the NJT5b L. sigillatus (Mediterranean Tethys; MATTIOLI & ERBA, 1999) nannofossil subzones. Since in the Lusitanian Basin a mixing of N- and S-Te...

  3. Living Lands

    DEFF Research Database (Denmark)

    Christensen, Suna Møller

    2015-01-01

    , hunters attended to questions like safe-journeying on ice or the role of natural surroundings in children’s education, in ways revealing a relational perception of ‘nature’ and dissolving culture-nature dualisms. Hunters’ experiences in living the land afforded children a dwelling position from which...... to grow with the features of the land. Framed this way, ‘nature’ was regarded as part of the social world. I suggest that learning among Arctic hunters is social and twofold. First, we can learn how human-environment relations influence individual life trajectories. Secondly, ‘nature’ as part...

  4. Lively package

    International Nuclear Information System (INIS)

    Jaremko, G.

    1997-01-01

    Progress on the Lloydminster Heavy Oil Interpretive Centre, sponsored by the Lloydminster Oilfield Technical Society and expected to open in late 1998, was discussed. Some $150,000 of the $750,000 budget is already in the bank, and another $150,000 is in the pipeline. The Centre will be added to an existing and well-established visitor's site. It is reported to contain a lively and imaginatively-designed exhibit package, and promises to become a combination of educational tool and tourist attraction for the town of Lloydminster, Saskatchewan, in the heart of heavy oil country

  5. Field Evidence of Cadmium Phytoavailability Decreased Effectively by Rape Straw and/or Red Mud with Zinc Sulphate in a Cd-Contaminated Calcareous Soil

    Science.gov (United States)

    Li, Bo; Yang, Junxing; Wei, Dongpu; Chen, Shibao; Li, Jumei; Ma, Yibing

    2014-01-01

    To reduce Cd phytoavailability in calcareous soils, the effects of soil amendments of red mud, rape straw, and corn straw in combination with zinc fertilization on Cd extractability and phytoavailability to spinach, tomato, Chinese cabbage and radish were investigated in a calcareous soil with added Cd at 1.5 mg kg−1. The results showed that water soluble and exchangeable Cd in soils was significantly decreased by the amendments themselves from 26% to 70%, which resulted in marked decrease by approximately from 34% to 77% in Cd concentration in vegetables. The amendments plus Zn fertilization further decreased the Cd concentration in vegetables. Also cruciferous rape straw was more effective than gramineous corn straw. In all treatments, rape straw plus red mud combined with Zn fertilization was most effective in decreasing Cd phytoavailability in soils, and it is potential to be an efficient and cost-effective measure to ensure food safety for vegetable production in mildly Cd-contaminated calcareous soils. PMID:25303439

  6. Applications of some non destructive testing techniques to the characterization of calcareous rocks: ultrasounds, X and gamma-ray radiography, tomography, neutron radiography

    International Nuclear Information System (INIS)

    Sicardy, O.

    1986-02-01

    NUCLEART Laboratory has been developping various techniques of conservation of art objects made of wood or stone. It has, among others, achieved a technique of strengthening porous stone objects, by resin impregnation followed by polymerization under gamma rays. The good conduct of such operations implies the existence of characterization means, before and after treatment of the objects. Two means of rocks characterization have been studied: - ultrasound techniques, - radiography techniques. The first part consists in a general description of the calcareous rocks morphology and a presentation of the studied specimens. The second part deals with the application of ultrasound techniques to rocks. Experimentally, one pays particular attention to the specific aspects of ultrasounds propagation inside materials like porous rocks, and especially diffusion phenomena. Results were interpreted in terms of propagation medium structure. Practical interest for rocks control through such techniques has been underligned. The third part concerns the application of radiographic techniques to calcareous rocks. Experimental work consists in establishing exposure curves for a wide range of energy, and the images quality determination. Through a statistics approach, and using digitalization techniques, one has done an exhaustive study of the radiographic noise. Moreover two techniques close to conventional radiography were explored: neutron radiography and X-ray tomography. Their specificity and interest in the case of calcareous rocks have been shown [fr

  7. The study of mechanical behavior on the interface between calcar-defect femur and restorations by means of finite element analysis

    International Nuclear Information System (INIS)

    Shi, X.H.; Jiang, W.; Chen, H.Z.; Zou, W.; Wang, W.D.; Guo, Z.; Luo, J.M.; Gu, Z.W.; Zhang, X.D.

    2008-01-01

    The mechanical behaviors of calcar-defected femur and restorations under physiological load are the key factors that will greatly influence the success of femur calcar defect repairing, especially the stress distribution on the bone-restoration interface. 3D finite elements analysis (FEA) was used to analyze the mechanical characters on the interfaces between femoral calcar defects and bone cement or HA restorations. Under the load of two times of a human weight (1436.03 N) and with the increase of the defect dimension from 6 mm to 12 mm, the maximal stresses on the surface of restorations are from 7.06 MPa to 11.89 MPa for bone cement and 2.97-9 MPa for HA separately. In this condition, HA restoration will probably be broken on the bone-restoration interface when the defect diameter is beyond 8 mm. Furthermore, under the load of 1.5 times of a human weight, HA restoration would not be safe unless the defect dimension is smaller than 10 mm, because the maximal stress (4.62 MPa) on the restoration is only a little lower than compressive strength of HA, otherwise the bone fixation device should be applied to ensure the safety. It is relatively safe for all restorations under all the tested defect sizes when the load is just the weight of a human body

  8. Calcareous nannofossil and ammonite integrated biostratigraphy across the Jurassic - Cretaceous boundary strata of the Kopanitsa composite section (West Srednogorie Unit, southwest Bulgaria)

    Science.gov (United States)

    Stoykova, Kristalina; Idakieva, Vyara; Ivanov, Marin; Reháková, Daniela

    2018-04-01

    Calcareous nannofossil, calpionellid and ammonite occurrences have been directly constrained across the Jurassic-Cretaceous boundary interval in the section of Kopanitsa, SW Bulgaria. This section reveals a continuous and expanded sedimentary record through the Upper Tithonian and Lower Berriasian, besides an excellent calcareous nannofossil and ammonite record. The topmost part of the NJT 16b and the base of NJT 17a nannofossil Subzones correspond to the ammonite Microcanthum / Transitorius Subzone. The major part of the NJT 17a Subzone equates to the Durangites spp. ammonite Zone, whereas the NJT 17b Subzone correlates to the lower part of the B. jacobi ammonite Zone. The NKT nannofossil Zone approximately corresponds to the upper part of the B. jacobi Zone and the NK-1 nannofossil Zone correlates at least to the lowest part of the T. occitanica Zone. The FOs of Nannoconus globulus minor, N. wintereri, N. kamptneri minor, N. steinmannii minor, N. kamptneri kamptneri and N. steinmannii steinmannii are confirmed as reliable bio-horizons for correlations in the Mediterranean Tethys area. The first occurrence of Nannoconus wintereri is regarded as an almost concomitant event with the first occurrence of Berriasella jacobi. We suggest it could be the most useful nannofossil proxy for approximating the base of the B. jacobi Zone. Rare, but relatively well preserved calpionellids and calcareous dinoflagellates together with microfacies analysis were used additionally for stratigraphical and palaeoenvironmental interpretations. The investigated sediments are typical for the steep slope of a steepened ramp, with accumulation of hemipelagic and gravitational deposits.

  9. Field evidence of cadmium phytoavailability decreased effectively by rape straw and/or red mud with zinc sulphate in a Cd-contaminated calcareous soil.

    Directory of Open Access Journals (Sweden)

    Bo Li

    Full Text Available To reduce Cd phytoavailability in calcareous soils, the effects of soil amendments of red mud, rape straw, and corn straw in combination with zinc fertilization on Cd extractability and phytoavailability to spinach, tomato, Chinese cabbage and radish were investigated in a calcareous soil with added Cd at 1.5 mg kg-1. The results showed that water soluble and exchangeable Cd in soils was significantly decreased by the amendments themselves from 26% to 70%, which resulted in marked decrease by approximately from 34% to 77% in Cd concentration in vegetables. The amendments plus Zn fertilization further decreased the Cd concentration in vegetables. Also cruciferous rape straw was more effective than gramineous corn straw. In all treatments, rape straw plus red mud combined with Zn fertilization was most effective in decreasing Cd phytoavailability in soils, and it is potential to be an efficient and cost-effective measure to ensure food safety for vegetable production in mildly Cd-contaminated calcareous soils.

  10. Calcareous nannofossil and ammonite integrated biostratigraphy across the Jurassic – Cretaceous boundary strata of the Kopanitsa composite section (West Srednogorie Unit, southwest Bulgaria

    Directory of Open Access Journals (Sweden)

    Stoykova Kristalina

    2018-04-01

    Full Text Available Calcareous nannofossil, calpionellid and ammonite occurrences have been directly constrained across the Jurassic–Cretaceous boundary interval in the section of Kopanitsa, SW Bulgaria. This section reveals a continuous and expanded sedimentary record through the Upper Tithonian and Lower Berriasian, besides an excellent calcareous nannofossil and ammonite record. The topmost part of the NJT 16b and the base of NJT 17a nannofossil Subzones correspond to the ammonite Microcanthum / Transitorius Subzone. The major part of the NJT 17a Subzone equates to the Durangites spp. ammonite Zone, whereas the NJT 17b Subzone correlates to the lower part of the B. jacobi ammonite Zone. The NKT nannofossil Zone approximately corresponds to the upper part of the B. jacobi Zone and the NK-1 nannofossil Zone correlates at least to the lowest part of the T. occitanica Zone. The FOs of Nannoconus globulus minor, N. wintereri, N. kamptneri minor, N. steinmannii minor, N. kamptneri kamptneri and N. steinmannii steinmannii are confirmed as reliable bio-horizons for correlations in the Mediterranean Tethys area. The first occurrence of Nannoconus wintereri is regarded as an almost concomitant event with the first occurrence of Berriasella jacobi. We suggest it could be the most useful nannofossil proxy for approximating the base of the B. jacobi Zone. Rare, but relatively well preserved calpionellids and calcareous dinoflagellates together with microfacies analysis were used additionally for stratigraphical and palaeoenvironmental interpretations. The investigated sediments are typical for the steep slope of a steepened ramp, with accumulation of hemipelagic and gravitational deposits.

  11. Methyl green-pyronin Y staining of nucleic acids: studies on the effects of staining time, dye composition and diffusion rates

    DEFF Research Database (Denmark)

    Prentø, P; Lyon, H O

    2003-01-01

    individually, simultaneously and sequentially. The results are presented as color charts approximating the observed staining patterns using a computerized palette. Our results indicate unequivocally that the differential staining is not time-dependent, but that it is dictated by the relative concentrations...

  12. 14C dating of freshwater carbonate sediments with special reference to calcareous tufas and laminated lake sediments

    International Nuclear Information System (INIS)

    Pazdur, M.F.

    1992-09-01

    The sequence of laminated sediment of the lake Gosciaz, Poland, covers more than 13,000 years and is actually the longest sequence known so far. Besides of reconstructing past environmental changes, this sequence offers an excellent possibility for studying natural C-14 variations and calibrating the C-14 time scale in a range beyond 6,000 years B.P. The floating varve chronology based on previously taken sediment cores which cover a period of 9,682 years, has been improved by this study. Relative water level changes of the lake during the past 11,500 years have been reconstructed by means of C-14 and C-13 measurements carried out on carbonate fractions of the lake sediments. Periodical variations in the width of annual layers were found. The periods identified are 11 years and 22 years (solar cycle), 35 years (Bruckner cycle), and 200 years. The ratio of summer layer width and the total width of the annual layer shows secular changes which correlate with paleotemperature records. The duration of the Younger Dryas period was determined by combining the floating varve chronology with isotope and pollen analyses of the sediment material. A value of 1,500 years was found. The study also included radiocarbon dating of calcareous tufa taken from different study areas. 26 refs, 26 figs, 6 tabs

  13. Growth and carbon fixation rate of calcareous algae cricosphaera carterae. Sekkaiso cricosphaera carterae no zoshoku to tanso kotei sokudo

    Energy Technology Data Exchange (ETDEWEB)

    Seki, M; Furusaki, S [The University of Tokyo, Tokyo (Japan). Faculty of Engineering; Shigematsu, K [Sumitomo Chemical Co. Ltd., Osaka (Japan); Shigeta, K [Kanagawa Prefectural Office, Yokohama (Japan)

    1993-09-10

    Notice has been given on a calcareous alga among micro marine algae that play an important role in carbon circulation, and the representative alga, Cricosphaera carterae was cultured to discuss growth and carbon fixation rate experimentally. It was found that nutrient salt is taken in more actively in the bright period during which no fission occurs, and less actively during the growth stage in the dark period. Dependence of nitrate concentration on specific growth rate was measured with semi-continuous culture and two formulas were formulated. The specific growth rate was 0.53/d at an average nitrogen concentration on the ocean surface of 15 mg/m[sup 3]. The maximum specific growth rate was 0.9/d, and the fixing ratio of inorganic carbon to organic carbon was roughly 0.1. Further, the alga was cultured with CO2 concentration doubled (to 715 ppm), where no large difference was discovered in the growth and the inorganic carbon fixation. From these findings, the carbon fixation amount due to algae on the entire earth was calculated to roughly 4 billion tons per year. 23 refs., 10 figs., 4 tabs.

  14. Biological activity of soddy-calcareous soils and cultural layers in Alanian settlements of the Kislovodsk basin

    Science.gov (United States)

    Chernysheva, E. V.; Kashirskaya, N. N.; Korobov, D. S.; Borisov, A. V.

    2014-09-01

    Microbiological investigations of cultural layers were performed in a settlement of the Alanian culture—Podkumskoe-2 (the 2nd-4th centuries AD). The present-day soddy-calcareous soils (rendzinas) used for different purposes were also studied near this settlement. The most significant changes in the initial characteristics of the soil microbial communities occurred under the residential influence more than 1500 years ago; these changes have been preserved until the present time. In the areas subjected to the anthropogenic impact, the total microbial biomass (the weighted average of 3720 μg C/g soil) was lower than that in the background soil. The minimal values of the microbial biomass were found in the soil of the pasture—2.5 times less than in the background soil. The urease activity of the cultural layer was higher than that of the soils nearby the settlement. Elevated values of the cellulose activity were also recorded only in the cultural layers. The current plowing has led to a significant decrease in the mycelium biomass of the microscopic fungi. In the soil of the fallow, the weighted average value of the fungal hyphae biomass along the profile was twice lower than that in the background soil and cultural layers of the settlement. The pasture first affected the active microbial biomass and, to a lesser extent, the amount of microscopic fungi.

  15. A study on zinc distribution in calcareous soils for cowpea (Vigna Unguiculata L.) and barely ( Hordeum Vulgare L.)

    Science.gov (United States)

    Boroomand, Naser; Maleki, Mohammad Reza

    2010-05-01

    Compared to other cereals, such as wheat and barley cultivars which have low sensitivity to Zn deficiency, cowpea is sensitive to zinc (Zn) deficiency, however it extensively grows even in soils with deficient in Zn. A 8-week greenhouse experiment was conducted to study the response of cowpea and barely to Zn in calcareous soils with different DTPA- Zn. The soil samples were taken from soil surface up to 0.3 m in which their DTPA- Zn ranged from 0.5 to 3.5 mg kg-1. Shoot dry matter, concentration and uptake of Zn were found to be significantly correlated with soil DTPA- Zn in cowpea and barely. Critical deficiency level of Zn in cowpea was 1.3 mg kg-1 in soil and 28.5 mg kg-1 in shoot dry matter, however, to barely symptoms of Zn deficiency was not observed and concentration of Zn was higher than the critical level reported in literatures. Organic carbon (OC), calcium carbonate equivalent (CCE), pH and field capacity soil moisture content(FC) were significantly correlated with plant responses to Zn which were the most influenced characteristics to Zn uptake by plants.

  16. Formation of calcareous nodules in loess-paleosol sequences: Reviews of existing models with a proposed new "per evapotranspiration model"

    Science.gov (United States)

    Li, Yanrong; Zhang, Weiwei; Aydin, Adnan; Deng, Xiaohong

    2018-04-01

    Loess is a product of aeolian deposition during Quaternary glaciation cycles. Loess-paleosol sequences are rich in calcareous nodules (CNs). In the literature, two models are widely cited for the formation of CNs, namely "per descendum" and "per ascendum". However, there has been no direct testing or monitoring to support either of these contradictory models. This paper reviews a large number of multidisciplinary literature to evaluate the consistency, reliability and rationality of these two models. Three main conclusions are drawn: (1) the causative factors (variation of pH value along loess-paleosol sequence, decrease of CO2 partial pressure, and reduction of solvent water) that are used to support the per descendum model do not completely explain the supersaturation of infiltration solution with CaCO3, thereby making this model questionable; (2) the per ascendum model explains the formation of CNs along narrow horizons through upward evaporation; however, it fails to produce sporadic distributions and irregular shapes of nodules on loess slope faces and the frequent appearance of nodules around plant roots. In order to reconcile these deficiencies, we conducted an extensive field survey in various parts of Shanxi province. Based on this new set of observations, it was concluded that the "per ascendum" model can be extended to explain all occurrences of CNs. This extended model is called "per evapotranspiration".

  17. Optimizing Available Phosphorus in Calcareous Soils Fertilized with Diammonium Phosphate and Phosphoric Acid Using Freundlich Adsorption Isotherm

    Science.gov (United States)

    Akhtar, Muhammad

    2013-01-01

    In calcareous soils, phosphorus (P) retention and immobilization take place due to precipitation and adsorption. Since soil pH is considered a major soil variable affecting the P sorption, an acidic P fertilizer could result in low P adsorption compared to alkaline one. Therefore, P adsorption from DAP and phosphoric acid (PA) required to produce desired soil solution P concentration was estimated using Freundlich sorption isotherms. Two soils from Faisalabad and T. T. Singh districts were spiked with 0, 10, and 20 % CaCO3 for 15 days. Freundlich adsorption isotherms (P = aC b/a) were constructed, and theoretical doses of PA and DAP to develop a desired soil solution P level (i.e., 0.20 mg L−1) were calculated. It was observed that P adsorption in soil increased with CaCO3. Moreover, at all the levels of CaCO3, P adsorption from PA was lower compared to that from DAP in both the soils. Consequently, lesser quantity of PA was required to produce desired solution P, 0.2 mg L−1, compared to DAP. However, extrapolating the developed relationship between soil CaCO3 contents and quantity of fertilizer to other similar textured soils needs confirmation. PMID:24307878

  18. Optimizing Available Phosphorus in Calcareous Soils Fertilized with Diammonium Phosphate and Phosphoric Acid Using Freundlich Adsorption Isotherm

    Directory of Open Access Journals (Sweden)

    Asif Naeem

    2013-01-01

    Full Text Available In calcareous soils, phosphorus (P retention and immobilization take place due to precipitation and adsorption. Since soil pH is considered a major soil variable affecting the P sorption, an acidic P fertilizer could result in low P adsorption compared to alkaline one. Therefore, P adsorption from DAP and phosphoric acid (PA required to produce desired soil solution P concentration was estimated using Freundlich sorption isotherms. Two soils from Faisalabad and T. T. Singh districts were spiked with 0, 10, and 20 % for 15 days. Freundlich adsorption isotherms ( were constructed, and theoretical doses of PA and DAP to develop a desired soil solution P level (i.e., 0.20 mg L−1 were calculated. It was observed that P adsorption in soil increased with . Moreover, at all the levels of , P adsorption from PA was lower compared to that from DAP in both the soils. Consequently, lesser quantity of PA was required to produce desired solution P, 0.2 mg L−1, compared to DAP. However, extrapolating the developed relationship between soil contents and quantity of fertilizer to other similar textured soils needs confirmation.

  19. Cation exchange and CaCO 3 dissolution during artificial recharge of effluent to a calcareous sandstone aquifer

    Science.gov (United States)

    Goren, Orly; Gavrieli, Ittai; Burg, Avihu; Lazar, Boaz

    2011-03-01

    SummaryThis research describes a field study and laboratory simulations of the geochemical evolution of groundwater following a recharge of effluent into aquifers. The study was conducted in the soil aquifer treatment (SAT) system of the Shafdan sewage reclamation plant, Israel. The SAT system recharges secondary effluent into the calcareous sandstone sediments of the Israeli Coastal Aquifer as a tertiary treatment. The reclaimed effluent is recovered ca. 500 m off the recharge basin and is used for unlimited irrigation. The laboratory simulations in which effluent was pumped through experimental columns packed with pristine Shafdan sediment showed that the chemical composition of the outflowing water was controlled mainly by cation exchange and CaCO 3 dissolution. Na +, K + and Mg 2+ were adsorbed and Ca 2+ was desorbed during the initial stage of recharge. The equilibrium distribution of the adsorbed cations was: Ca 2+ ˜ 60%, Mg 2+ ˜ 20%, and Na + and K + ˜ 10% each. The Ca 2+ in the Shafdan production wells and in the experimental columns outflow (˜5 meq L -1) was always higher than the Ca 2+ in the recharged effluent (˜3.5 meq L -1), indicating continuous CaCO 3 dissolution. This study demonstrates that besides mixing, a suite of geochemical processes should be considered when assessing groundwater quality following artificial recharge of aquifers.

  20. Linkage between N2O emission and functional gene abundance in an intensively managed calcareous fluvo-aquic soil

    Science.gov (United States)

    Yang, Liuqing; Zhang, Xiaojun; Ju, Xiaotang

    2017-02-01

    The linkage between N2O emissions and the abundance of nitrifier and denitrifier genes is unclear in the intensively managed calcareous fluvo-aquic soils of the North China Plain. We investigated the abundance of bacterial amoA for nitrification and narG, nirS, nirK, and nosZ for denitrification by in situ soil sampling to determine how the abundance of these genes changes instantly during N fertilization events and is related to high N2O emission peaks. We also investigated how long-term incorporated straw and/or manure affect(s) the abundance of these genes based on a seven-year field experiment. The overall results demonstrate that the long-term application of urea-based fertilizer and/or manure significantly enhanced the number of bacterial amoA gene copies leading to high N2O emission peaks after N fertilizer applications. These peaks contributed greatly to the annual N2O emissions in the crop rotation. A significant correlation between annual N2O emissions and narG, nirS, and nirK gene numbers indicates that the abundance of these genes is related to N2O emission under conditions for denitrification, thus partly contributing to the annual N2O emissions. These findings will help to draw up appropriate measures for mitigation of N2O emissions in this ‘hotspot’ region.

  1. Stabilization of Cd-, Pb-, Cu- and Zn-contaminated calcareous agricultural soil using red mud: a field experiment.

    Science.gov (United States)

    Wang, Yangyang; Li, Fangfang; Song, Jian; Xiao, Ruiyang; Luo, Lin; Yang, Zhihui; Chai, Liyuan

    2018-04-12

    Red mud (RM) was used to remediate heavy metal-contaminated soils. Experiments with two different dosages of RM added to soils were carried out in this study. It was found that soil pH increased 0.3 and 0.5 unit with the dosage of 3 and 5% (wt%), respectively. At the dosage of 5%, the highest stabilization efficiencies for Cd, Pb, Cu and Zn reached 67.95, 64.21, 43.73 and 63.73%, respectively. The addition of RM obviously transferred Cd from the exchangeable fraction to the residual fraction. Meanwhile, in comparison with the control (no RM added), it reduced 24.38, 49.20, 19.42 and 8.89% of Cd, Pb, Cu and Zn in wheat grains at the RM addition dosage of 5%, respectively. At the same time, the yield of wheat grains increased 17.81 and 24.66% at the RM addition dosage of 3 and 5%, respectively. Finally, the addition of RM did not change the soil bacterial community. These results indicate that RM has a great potential in stabilizing heavy metals in calcareous agricultural soils.

  2. Effect of phosphorus and zinc on growth and their uptake in hybrid maize grown in a calcareous alluvial soil

    International Nuclear Information System (INIS)

    Parik, B.L.; Santikari, A.K.; Das, S.K.; Chowdhury, B.

    1977-01-01

    Hybrid maize (Zea mays L., var. Ganga 101) was grown in glasshouse at different levels of phosphorus with and without zinc, in a calcareous alluvial soil of North Bihar. Phosphorus was applied at 0, 11, 22, 44 and 88 ppm as tagged P in single superphosphats. Zinc was applied at 0 and 10 ppm as 65 ZnCl 2 . Application of phosphorus and zinc significantly increased the dry matter yield up to P 44 . Higher dose of P resulted in depressed growth accompanied by decreased zinc concentration and uptake by plants, exhibiting zinc deficiency symptoms. Higher levels of P and Zn increased their concentrations in the plant, but their total uptake was reduced at P 88 . With higher levels of P the percent utilization of fertilizer P decreased, while in zinc treated soils uptake of fertilizer P increased. Percent utilization of added zinc increased with increase in P levels upto P 44 and decreased thereafter, although at this level of P a greater percentage of zinc was derived from the fertilizer. (author)

  3. Clinical utility of an automated instrument for gram staining single slides.

    Science.gov (United States)

    Baron, Ellen Jo; Mix, Samantha; Moradi, Wais

    2010-06-01

    Gram stains of 87 different clinical samples were prepared by the laboratory's conventional methods (automated or manual) and by a new single-slide-type automated staining instrument, GG&B AGS-1000. Gram stains from either heat- or methanol-fixed slides stained with the new instrument were easy to interpret, and results were essentially the same as those from the methanol-fixed slides prepared as a part of the routine workflow. This instrument is well suited to a rapid-response laboratory where Gram stain requests are commonly received on a stat basis.

  4. Clinical Utility of an Automated Instrument for Gram Staining Single Slides ▿

    Science.gov (United States)

    Baron, Ellen Jo; Mix, Samantha; Moradi, Wais

    2010-01-01

    Gram stains of 87 different clinical samples were prepared by the laboratory's conventional methods (automated or manual) and by a new single-slide-type automated staining instrument, GG&B AGS-1000. Gram stains from either heat- or methanol-fixed slides stained with the new instrument were easy to interpret, and results were essentially the same as those from the methanol-fixed slides prepared as a part of the routine workflow. This instrument is well suited to a rapid-response laboratory where Gram stain requests are commonly received on a stat basis. PMID:20410348

  5. "Stain in life": The meaning of urinary incontinence in the context of Muslim postmenopausal women through hermeneutic phenomenology.

    Science.gov (United States)

    Hamid, Tengku Aizan; Pakgohar, Minoo; Ibrahim, Rahimah; Dastjerdi, Marzieh Vahid

    2015-01-01

    UI is a worldwide chronic condition among postmenopausal women. Little is known about the meaning of lived experiences of urinary incontinence of these women's viewpoints in their context. The aim of this study was to illuminate the experience of Muslim community-dwelling postmenopausal women who were living with urinary incontinence (UI). Seventeen women with UI (range: 52-68 years) who had experienced it for more than ten years were interviewed. A phenomenological hermeneutic method was used to analyze and interpret the interview texts. The women's experiences of living with urinary incontinence have been presented in terms of three main themes: disruption of normal functioning, self-imposed restriction, and feelings of despair. Disruption of normal functioning meant emotional, spiritual, physical, and daily life disruption. Self-imposed restriction meant suppression of delights and needs and avoidance of social interactions. Feelings of despair referred to predictions of a bad and dark future of living with urinary incontinence, ambiguity, and hopelessness. The meaning of living with UI has been considered a 'stain in life'. Health care providers should be familiar with the different manifestations of urinary incontinence for early diagnosis and prevention of the negative effects of this condition to improve quality of life. In addition, symbolic interactionism theory can help health care providers to understand the meaning of urinary incontinence for women. Copyright © 2015 Elsevier Ireland Ltd. All rights reserved.

  6. Hirschsprung′s disease diagnosis: Comparison of immunohistochemical, hematoxilin and eosin staining

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    Memarzadeh Mehrdad

    2009-01-01

    Full Text Available Background : The diagnosis of Hirschsprung′s disease (HD is based on the absence of ganglion cells. In hemotoxilin and eosin (H and E as well as acetylcholine esterase staining there are limitations in the diagnosis of immature ganglion cells in neonates. Methods : In this prospective study, 54 biopsies taken from suspected HD patients (five mucosal specimens and 49 full thickness specimens were studied. In the laboratory, after preparing sections of paraffin embedded tissues, H and E staining slides were compared with immunohistochemical (IHC staining including: S100, NSE, CD117, CD56, Cathepsin D, Vimentin, BCL2, GFAP, Synaptophysin and chromogranin. Results : The study revealed 30 negative (absence of ganglion cells cases (55.5%, 17 positive cases (31.04% and seven suspected cases (12.9% of ganglion cells on the H and E staining. On IHC staining with CD56 and Cathepsin D, all of the 17 positive cases detected through H and E, were confirmed for having ganglion cells and out of 30 cases reported negative on H and E staining, 28(93.3% were reported negative and two (6.7% positive by IHC staining. Of the seven suspected cases H and E staining, IHC staining detectedganglion cells only in five slides; two remained negative. Conclusions : IHC staining using CD56 and Cathepsin D improved the accuracy of diagnosis in HD when used in addition to H and E staining technique, especially for negative or suspicious slides.

  7. A Novel Contrast Stain for the Rapid Diagnosis of Pityriasis Versicolor: A Comparison of Chicago Sky Blue 6B Stain, Potassium Hydroxide Mount and Culture.

    Science.gov (United States)

    Lodha, Nikita; Poojary, Shital Amin

    2015-01-01

    The mycological study of pityriasis versicolor is usually done by potassium hydroxide (KOH) mount and culture. However, KOH mount lacks a color contrast and requires a trained eye to interpret, while culture is difficult to perform, time consuming and has low sensitivity. Chicago Sky Blue 6B (CSB) is a new contrast stain that highlights the fungal hyphae and spores, blue against a purplish background. This study was done to compare the utility of a novel contrast stain (CSB stain) with KOH mount and culture. Skin scrapings from the lesions of 100 clinically diagnosed cases of P. versicolor were subjected to (1) KOH mount and CSB stain for direct microscopic examination and (2) culture using Sabouraud's dextrose agar. The statistical analysis of CSB stain and culture was done using KOH mount as the reference method, as it is the most commonly performed and practical diagnostic test available for P. versicolor. An interrater reliability analysis using the Cohen's Kappa statistic was performed to determine consistency (agreement) among the different modalities. Direct microscopy with CSB stain, KOH mount and mycological culture showed positive results in 98 (98%), 92 (92%) and 56 (56%) patients, respectively. Using KOH mount as the reference method, CSB stain had a sensitivity of 100% which was significantly higher than culture (60.9%). Statistically significant fair agreement was found between CSB stain and KOH mount (94% with κ=0.38, P < 0.001). Negligible agreement was found between CSB stain and culture (66%, κ=0.199, P = 0.001) as well as between KOH mount and culture (64%, κ=0.051, P = 0.107). CSB staining of skin scrapings is the most sensitive method for the diagnosis of pityriasis versicolor. Due to the distinct contrast provided by CSB, it is easy to perform, rapid and qualitatively superior to KOH mount.

  8. A novel contrast stain for the rapid diagnosis of pityriasis versicolor: A comparison of Chicago Sky Blue 6B stain, potassium hydroxide mount and culture

    Directory of Open Access Journals (Sweden)

    Nikita Lodha

    2015-01-01

    Full Text Available Background: The mycological study of pityriasis versicolor is usually done by potassium hydroxide (KOH mount and culture. However, KOH mount lacks a color contrast and requires a trained eye to interpret, while culture is difficult to perform, time consuming and has low sensitivity. Chicago Sky Blue 6B (CSB is a new contrast stain that highlights the fungal hyphae and spores, blue against a purplish background. Aims and Objectives: This study was done to compare the utility of a novel contrast stain (CSB stain with KOH mount and culture. Materials and Methods: Skin scrapings from the lesions of 100 clinically diagnosed cases of P. versicolor were subjected to (1 KOH mount and CSB stain for direct microscopic examination and (2 culture using Sabouraud′s dextrose agar. The statistical analysis of CSB stain and culture was done using KOH mount as the reference method, as it is the most commonly performed and practical diagnostic test available for P. versicolor. An interrater reliability analysis using the Cohen′s Kappa statistic was performed to determine consistency (agreement among the different modalities. Observations and Results: Direct microscopy with CSB stain, KOH mount and mycological culture showed positive results in 98 (98%, 92 (92% and 56 (56% patients, respectively. Using KOH mount as the reference method, CSB stain had a sensitivity of 100% which was significantly higher than culture (60.9%. Statistically significant fair agreement was found between CSB stain and KOH mount (94% with κ=0.38, P < 0.001. Negligible agreement was found between CSB stain and culture (66%, κ=0.199, P = 0.001 as well as between KOH mount and culture (64%, κ=0.051, P = 0.107. Conclusion: CSB staining of skin scrapings is the most sensitive method for the diagnosis of pityriasis versicolor. Due to the distinct contrast provided by CSB, it is easy to perform, rapid and qualitatively superior to KOH mount.

  9. Amnioinfusion for meconium-stained liquor in labour.

    Science.gov (United States)

    Hofmeyr, G Justus; Xu, Hairong; Eke, Ahizechukwu C

    2014-01-23

    Amnioinfusion is thought to dilute meconium present in the amniotic fluid and so reduce the risk of meconium aspiration. To assess the effects of amnioinfusion for meconium-stained liquor on perinatal outcome. We searched the Cochrane Pregnancy and Childbirth Group's Trials Register (1 December 2013). Randomised trials comparing amnioinfusion with no amnioinfusion for women in labour with moderate or thick meconium staining of the amniotic fluid. Three review authors independently assessed eligibility and trial quality, and extracted data. Fourteen studies of variable quality (4435 women) are included.Subgroup analysis was performed for studies from settings with limited facilities to monitor the baby's condition during labour and intervene effectively, and settings with standard peripartum surveillance.Settings with standard peripartum surveillance: there was considerable heterogeneity for several outcomes. There was no significant reduction in the primary outcomes meconium aspiration syndrome, perinatal death or severe morbidity, and maternal death or severe morbidity. There was a reduction in caesarean sections (CSs) for fetal distress but not overall. Meconium below the vocal cords diagnosed by laryngoscopy was reduced, as was neonatal ventilation or neonatal intensive care unit admission, but there was no significant reduction in perinatal deaths or other morbidity. Planned sensitivity analysis excluding trials with greater risk of bias resulted in an absence of benefits for any of the outcomes studied.Settings with limited peripartum surveillance: three studies were included. In the amnioinfusion group there was a reduction in CS for fetal distress and overall; meconium aspiration syndrome (three studies, 1144 women; risk ratio (RR) 0.17, 95% confidence interval (CI) 0.05 to 0.52); perinatal mortality (three studies, 1151 women; RR 0.24, 95% CI 0.11 to 0.53) and neonatal ventilation or neonatal intensive care unit admission. In one of the studies, meconium

  10. Comparison of staining of mitotic figures by haematoxylin and eosin-and crystal violet stains, in oral epithelial dysplasia and squamous cell carcinoma

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    Ankle Madhuri

    2007-01-01

    Full Text Available Mitosis of cells gives rise to tissue integrity. Defects during mitosis bring about abnormalities. Excessive proliferation of cells due to increased mitosis is one such outcome, which is the hallmark in precancer and cancer. The localization of proliferating cells or their precursors may not be obvious and easy. Establishing an easy way to distinguish these mitotic cells will help in grading and understanding their biological potential. Although immunohistochemistry is an advanced method in use, the cost and time factor makes it less feasible for many laboratories. Selective histochemical stains like toluidine blue, giemsa and crystal violet have been used in tissues including the developing brain, neural tissue and skin. Aim of the study: 1To compare the staining of mitotic cells in haematoxylin and eosin with that in crystal violet. 2To compare the number of mitotic figures present in normal oral mucosa, epithelial dysplasia and oral squamous cell carcinoma in crystal violet-stained sections with that in H and E-stained sections. Materials and Methods: Ten tissues of normal oral mucosa and 15 tissues each of oral epithelial dysplasia seen in tobacco-associated leukoplakia and squamous cell carcinoma were studied to evaluate the selectivity of 1% crystal violet for mitotic figures. The staining was compared with standard H and E staining. Statistical analysis was done using Man-Whitney U test. Results: A statistically significant increase in the mean mitotic count was observed in crystal violet-stained sections of epithelial dysplasia as compared to the H and E-stained sections ( p = 0.0327. A similar increase in the mitotic counts was noted in crystal violet-stained sections of oral squamous cell carcinoma as compared to the H and E-stained sections.( p = 0.0443. No significant difference was found in the mitotic counts determined in dysplasia or carcinoma by either the crystal violet ( p = 0.4429 or the H and E-staining techniques ( p = 0

  11. The challenges of analysing blood stains with hyperspectral imaging

    Science.gov (United States)

    Kuula, J.; Puupponen, H.-H.; Rinta, H.; Pölönen, I.

    2014-06-01

    Hyperspectral imaging is a potential noninvasive technology for detecting, separating and identifying various substances. In the forensic and military medicine and other CBRNE related use it could be a potential method for analyzing blood and for scanning other human based fluids. For example, it would be valuable to easily detect whether some traces of blood are from one or more persons or if there are some irrelevant substances or anomalies in the blood. This article represents an experiment of separating four persons' blood stains on a white cotton fabric with a SWIR hyperspectral camera and FT-NIR spectrometer. Each tested sample includes standardized 75 _l of 100 % blood. The results suggest that on the basis of the amount of erythrocytes in the blood, different people's blood might be separable by hyperspectral analysis. And, referring to the indication given by erythrocytes, there might be a possibility to find some other traces in the blood as well. However, these assumptions need to be verified with wider tests, as the number of samples in the study was small. According to the study there also seems to be several biological, chemical and physical factors which affect alone and together on the hyperspectral analyzing results of blood on fabric textures, and these factors need to be considered before making any further conclusions on the analysis of blood on various materials.

  12. Diffuse reflectance FTIR of stains on grit blasted metals

    Energy Technology Data Exchange (ETDEWEB)

    Powell, G.L.; Hallman, R.L. Jr.; Cox, R.L. [Oak Ridge Centers for Manufacturing Technologies, TN (United States)

    1997-08-09

    Diffuse reflectance mid-infrared Fourier transform (DRIFT) spectroscopy has been applied to the detection of oil contamination on grit-blasted metals. The object of this application is to detect and discriminate between silicone and hydrocarbon oil contamination at levels approaching 10 mg/m{sup 2}. A portable FTIR spectrometer with dedicated diffuse reflectance optics was developed for this purpose. Using translation devices positioned by instructions from the spectrometer operating system, images of macroscopic substrates were produced with millimeter spatial resolution. The pixels that comprise an image are each a full mid-infrared spectrum with excellent signal-to-noise, each determined as individual files and uniquely saved to disc. Reduced spectra amplitudes, based on peak height, area, or other chemometric techniques, mapped as a function of the spatial coordinates of the pixel are used to display the image. This paper demonstrates the application of the technique to the analysis of stains on grit-blasted metals, including the calibration of the method, the inspection of substrates, and the migration of oil contamination.

  13. Akreditasi Perpustakaan Perguruan Tinggi: Pengalaman Perpustakaan STAIN Kediri

    Directory of Open Access Journals (Sweden)

    Komarudin Komarudin

    2016-07-01

    Abstract; The importance of quality has been a concern of college library librarian. National Library has compiled standards can be used as a minimum level college library quality. A form of formal recognition of compliance with these standards is by accrediting library. Accreditation aims to improve accredited institution so useful to build a library quality. As stipulated by Law Decree(UU No. 43 of 2007 and Government Regulation (PPNo. 24 of 2014, the National Library has the National Library Accreditation Agency (LAP-N. Accredited certificate can obtain a library based on the number of components weighted values of service, cooperation, collection, organization of library materials, human resources, building / space and infrastructure, budget, library management and maintenance of library collection. The experience of STAIN Kediri library in carrying out the library accreditation including : make a plan of accreditation activities, form preparation team of accreditation, perform self assessments, set up support files, send a letter of application and data file support, assessment accreditation forms, prepare for site assessment and carry out the acreditation. The main thing is the accreditation is a culture of quality. Hope to obtain the best value of accreditation lies in the culture of quality.

  14. Development of a stained cell nuclei counting system

    Science.gov (United States)

    Timilsina, Niranjan; Moffatt, Christopher; Okada, Kazunori

    2011-03-01

    This paper presents a novel cell counting system which exploits the Fast Radial Symmetry Transformation (FRST) algorithm [1]. The driving force behind our system is a research on neurogenesis in the intact nervous system of Manduca Sexta or the Tobacco Hornworm, which was being studied to assess the impact of age, food and environment on neurogenesis. The varying thickness of the intact nervous system in this species often yields images with inhomogeneous background and inconsistencies such as varying illumination, variable contrast, and irregular cell size. For automated counting, such inhomogeneity and inconsistencies must be addressed, which no existing work has done successfully. Thus, our goal is to devise a new cell counting algorithm for the images with non-uniform background. Our solution adapts FRST: a computer vision algorithm which is designed to detect points of interest on circular regions such as human eyes. This algorithm enhances the occurrences of the stained-cell nuclei in 2D digital images and negates the problems caused by their inhomogeneity. Besides FRST, our algorithm employs standard image processing methods, such as mathematical morphology and connected component analysis. We have evaluated the developed cell counting system with fourteen digital images of Tobacco Hornworm's nervous system collected for this study with ground-truth cell counts by biology experts. Experimental results show that our system has a minimum error of 1.41% and mean error of 16.68% which is at least forty-four percent better than the algorithm without FRST.

  15. Seasonal calcareous nannoplankton and other biogenic particle fluxes for 1990-2009: twenty-year long records from the central subarctic Pacific Ocean and the Bering Sea

    Science.gov (United States)

    Takahashi, Kozo; Tsutsui, Hideto

    2017-04-01

    Time-series sediment traps were deployed for nearly 20 years (1990-2009) at two long-term locations: Station SA (49°N, 174°W, trap depth 4,800 m, water depth 5,400 m) in the central subarctic Pacific, and Station AB (53.5°N, 177°W, trap depth 3,200 m, water depth 3,800 m) in the southern Bering Sea. Among many biogenic particles, calcareous nannoplankton represented nearly half or more of the entire calcium carbonate fluxes of the regions. Dominant taxa include Coccolithus pelagicus and Emiliania huxleyi. The flux maxima of the former taxon occurred twice a year during June and October-November, whereas that of the latter taxon only occurred primarily once a year in November at both stations, indicating environmental preferences of the taxa. Among many environmental conditions, the fluxes of Emiliania huxleyi showed strong correlations with both water temperatures above 45 m depth and air temperatures (these parameters taken with one-month lag [earlier values] considering sinking time of ca. a month to the respective trap depths). Coccolithus pelagicus, on the other hand, showed lower values in the correlation with temperatures (Tsutsui et al., 2016), indicating that this taxon is somewhat more dependent on other factors such as nutrients compared to those of E. huxleyi. The timings of the seasonal flux maxima of calcareous nannoplankton are quite different from and later than those of other taxonomic groups such as diatoms and silicoflagellates. The primary seasonal flux maxima of diatoms and silicoflagellates, for example, occurred in May, a month earlier than the June maximum of C. pelagicus, and secondary seasonal flux maxima occurred in August, 2-3 months earlier than those of calcareous nannoplankton at both stations, based on 8 year flux records for diatoms (Onodera and Takahashi, 2009) and 4 year records for silicoflagellates (Onodera and Takahashi, 2012). By examining seasonal changes of nitrate and phosphate concentrations above 50 m depth from ERDDAP

  16. Blood culture gram stain, acridine orange stain and direct sensitivity-based antimicrobial therapy of bloodstream infection in patients with trauma.

    Science.gov (United States)

    Behera, B; Mathur, P; Gupta, B

    2010-01-01

    The purpose of this study was to ascertain if the simple practice of Gram stain, acridine orange stain and direct sensitivity determination of positive blood culture bottles could be used to guide early and appropriate treatment in trauma patients with clinical suspicion of sepsis. The study also aimed to evaluate the error in interpreting antimicrobial sensitivity by direct method when compared to standard method and find out if specific antibiotic-organism combination had more discrepancies. Findings from consecutive episodes of blood stream infection at an Apex Trauma centre over a 12-month period are summarized. A total of 509 consecutive positive blood cultures were subjected to Gram staining. AO staining was done in BacT/ALERT-positive Gram-stain negative blood cultures. Direct sensitivity was performed from 369 blood culture broths, showing single type of growth in Gram and acridine orange staining. Results of direct sensitivity were compared to conventional sensitivity for errors. No 'very major' discrepancy was found in this study. About 5.2 and 1.8% minor error rates were noted in gram-positive and gram-negative bacteria, respectively, while comparing the two methods. Most of the discrepancies in gram-negative bacteria were noted in beta lactam - beta lactamase inhibitor combinations. Direct sensitivity testing was not reliable for reporting of methicillin and vancomycin resistance in Staphylococci. Gram stain result together with direct sensitivity testing is required for optimizing initial antimicrobial therapy in trauma patients with clinical suspicion of sepsis. Gram staining and AO staining proved particularly helpful in the early detection of candidaemia.

  17. Is the gram stain useful in the microbiologic diagnosis of VAP? A meta-analysis.

    Science.gov (United States)

    O'Horo, John C; Thompson, Deb; Safdar, Nasia

    2012-08-01

    In a meta-analysis examining respiratory specimen Gram stain for diagnosis of ventilator-associated pneumonia, absence of bacteria on Gram stain had a high negative predictive value, but a positive Gram stain correlated poorly with organisms recovered in culture. Rapid and accurate diagnosis of ventilator-associated pneumonia (VAP) is a major challenge and no generally accepted gold standard exists for VAP diagnosis. We conducted a meta-analysis to examine the role of respiratory specimen Gram stain to diagnose VAP, and the correlation with final culture results. In 21 studies, pooled sensitivity of Gram stain for VAP was 0.79 (95% confidence interval [CI], .77-0.81; P Gram stain for a VAP prevalence of 20%-30% was 91%, suggesting that VAP is unlikely with a negative Gram stain but the positive predictive value of Gram stain was only 40%. Pooled kappa was 0.42 for gram-positive organisms and 0.34 for gram-negative organisms, suggesting fair concordance between organisms on Gram stain and recovery by culture. Therefore, a positive Gram stain should not be used to narrow anti-infective therapy until culture results become available.

  18. Discrimination of p53 immunohistochemistry-positive tumors by its staining pattern in gastric cancer

    International Nuclear Information System (INIS)

    Ando, Koji; Oki, Eiji; Saeki, Hiroshi; Yan, Zhao; Tsuda, Yasuo; Hidaka, Gen; Kasagi, Yuta; Otsu, Hajime; Kawano, Hiroyuki; Kitao, Hiroyuki; Morita, Masaru; Maehara, Yoshihiko

    2015-01-01

    Immunohistochemistry staining of p53 is a cheap and simple method to detect aberrant function of p53. However, there are some discrepancies between the result of immunohistochemistry staining and mutation analysis. This study attempted to find a new definition of p53 staining by its staining pattern. Immunohistochemistry staining of p53 and TP53 gene mutation analysis were performed in 148 gastric cancer patients. Also SNP-CGH array analysis was conducted to four cases. Positive staining of p53 was observed in 88 (59.5%) tumors. Tumors with positive p53 staining showed malignant features compared to negative tumors. Mutation of TP53 gene was observed in 29 (19.6%) tumors with higher age and differentiated type. In positive p53 tumors, two types could be distinguished; aberrant type and scattered type. With comparison to TP53 gene mutation analysis, all the scattered type had wild-type TP53 gene (P = 0.0003). SNP-CGH array showed that scattered-type tumors had no change in the structure of chromosome 17. P53-scattered-type staining tumors may reflect a functionally active nonmutated TP53 gene. In interpretation of p53 immunohistochemistry staining, distinguishing p53-positive tumors by their staining pattern may be important in gastric cancer

  19. A robust, efficient and flexible method for staining myelinated axons in blocks of brain tissue.

    Science.gov (United States)

    Wahlsten, Douglas; Colbourne, Frederick; Pleus, Richard

    2003-03-15

    Previous studies have demonstrated the utility of the gold chloride method for en bloc staining of a bisected brain in mice and rats. The present study explores several variations in the method, assesses its reliability, and extends the limits of its application. We conclude that the method is very efficient, highly robust, sufficiently accurate for most purposes, and adaptable to many morphometric measures. We obtained acceptable staining of commissures in every brain, despite a wide variety of fixation methods. One-half could be stained 24 h after the brain was extracted and the other half could be stained months later. When staining failed because of an exhausted solution, the brain could be stained successfully in fresh solution. Relatively small changes were found in the sizes of commissures several weeks after initial fixation or staining. A half brain stained to reveal the mid-sagittal section could then be sectioned coronally and stained again in either gold chloride for myelin or cresyl violet for Nissl substance. Uncertainty, arising from pixelation of digitized images was far less than errors arising from human judgments about the histological limits of major commissures. Useful data for morphometric analysis were obtained by scanning the surface of a gold chloride stained block of brain with an inexpensive flatbed scanner.

  20. Identification criteria of the rare multi-flagellate Lophomonas blattarum: comparison of different staining techniques.

    Science.gov (United States)

    Alam-Eldin, Yosra Hussein; Abdulaziz, Amany Mamdouh

    2015-09-01

    Bronchopulmonary lophomoniasis (BPL) is an emerging disease of potential importance. BPL is presented by non-specific clinical picture and is usually accompanied by immunosuppression. Culture of Lophomonas blattarum is difficult and its molecular diagnosis has not yet been developed. Therefore, microscopic examination of respiratory samples, e.g., bronchoalveolar lavage (BAL) or sputum, is the mainstay of BPL diagnosis. Creola bodies and ciliocytophthoria are two forms of bronchial cells which occur in chest diseases with non-specific clinical picture like that of BPL. Both forms could be misrecognized as multi-flagellates because of their motile cilia in the wet mounts and due to shape variability of L. blattarum in stained smears. The aim of the study is to compare different staining techniques for visualizing L. blattarum to improve the recognition and diagnosis of BPL, to distinguish respiratory epithelial cells from L. blattarum and to decide which stain is recommended in suspected cases of BPL. BAL samples from patients which contain L. blattarum, creola bodies, and ciliocytophthoria were collected then wet mounts were examined. The BAL samples were also stained by Papanicolaou (PAP), Giemsa, hematoxylin and eosin (H & E), trichrome, Gram, and Diff-Quik (DQ) stains. The different staining techniques were compared regarding the stain quality. In wet mounts, the ciliary movement was coordinate and synchronous while the flagellar movement was wavy and leaded to active swimming of L. blattarum. In stained slides, bronchial cells were characterized by the presence of basal nucleus and the terminal bar from which the cilia arise. Trichrome was the best stain in demonstration of cellular details of L. blattarum. H & E, PAP, and Giemsa stains showed good quality of stains. Gram and DQ stains showed only pale hues of L. blattarum. We recommended adding Wheatley's trichrome staining to the differential diagnosis workup of cases of non-specific chest infections

  1. Tumor Budding Detection by Immunohistochemical Staining is Not Superior to Hematoxylin and Eosin Staining for Predicting Lymph Node Metastasis in pT1 Colorectal Cancer.

    Science.gov (United States)

    Okamura, Takuma; Shimada, Yoshifumi; Nogami, Hitoshi; Kameyama, Hitoshi; Kobayashi, Takashi; Kosugi, Shin-ichi; Wakai, Toshifumi; Ajioka, Yoichi

    2016-05-01

    Tumor budding is recognized as an important risk factor for lymph node metastasis in pT1 colorectal cancer. Immunohistochemical staining for cytokeratin has the potential to improve the objective diagnosis of tumor budding over detection based on hematoxylin and eosin staining. However, it remains unclear whether tumor budding detected by immunohistochemical staining is a significant predictor of lymph node metastasis in pT1 colorectal cancer. The purpose of this study was to clarify the clinical significance of tumor budding detected by immunohistochemical staining in comparison with that detected by hematoxylin and eosin staining. This was a retrospective study. The study was conducted at Niigata University Medical & Dental Hospital. We enrolled 265 patients with pT1 colorectal cancer who underwent surgery with lymph node dissection. Tumor budding was evaluated by both hematoxylin and eosin and immunohistochemical staining with the use of CAM5.2 antibody. Receiver operating characteristic curve analyses were conducted to determine the optimal cutoff values for tumor budding detected by hematoxylin and eosin and CAM5.2 staining. Univariate and multivariate analyses were performed to identify the significant factors for predicting lymph node metastasis. Receiver operating characteristic curve analyses revealed that the cutoff values for tumor budding detected by hematoxylin and eosin and CAM5.2 staining for predicting lymph node metastases were 5 and 8. On multivariate analysis, histopathological differentiation (OR, 6.21; 95% CI, 1.16-33.33; p = 0.03) and tumor budding detected by hematoxylin and eosin staining (OR, 4.91; 95% CI, 1.64-14.66; p = 0.004) were significant predictors for lymph node metastasis; however, tumor budding detected by CAM5.2 staining was not a significant predictor. This study was limited by potential selection bias because surgically resected specimens were collected instead of endoscopically resected specimens. Tumor budding detected by

  2. AUTHENTIC MATERIALS IN EXTENSIVE READING CLASS AT STAIN PONOROGO

    Directory of Open Access Journals (Sweden)

    Dhinuk Puspita Kirana

    2013-12-01

    Full Text Available It is widely believed that English Foreign Language (EFL learners need to develop their language proficiency by getting so much input. Moreover, students need to be familiarized with the real English us­age where real forms of communication and cultural knowledge are crucially exposed. Teaching through authentic materials will make the learners feel that they are learning a real language which is used by the real native speakers for real communication. incorporating au­thentic materials helps students acquire an effective communicative competence in the language focus. The research intended to describe the implementation of authentic materials in extensive reading class, the problems arise and the students’ responses toward the authen­tic materials in extensive reading class. The design of the research was Descriptive Qualitative method and the research subject was the lecturer of Extensive Reading class and 33 students in B class of the fourth semester of STAIN Ponorogo who took Extensive Read­ing subject. The instruments used were in the form of observation sheet, interview guideline and questionnaire. The implementation of authentic materials in extensive reading class covered some procedures into three main phases namely (1 Pre­ Activity, (2 Main­ Activity and (3 Post­Activity. The activities in main activity are as follows: (a Pre­ Activity; (b Whilst ­Activity; and (3 The language focus stage. There were problems arose during the implementation in terms of complicated planning, more time allocation and some disinterested students. Finally, the students showed significantly positive attitude toward the implementation of authentic materials in extensive reading class.

  3. Staining Method for Protein Analysis by Capillary Gel Electrophoresis

    Science.gov (United States)

    Wu, Shuqing; Lu, Joann J; Wang, Shili; Peck, Kristy L.; Li, Guigen; Liu, Shaorong

    2009-01-01

    A novel staining method and the associated fluorescent dye were developed for protein analysis by capillary SDS-PAGE. The method strategy is to synthesize a pseudo-SDS dye and use it to replace some of the SDS in SDS–protein complexes so that the protein can be fluorescently detected. The pseudo-SDS dye consists of a long, straight alkyl chain connected to a negative charged fluorescent head and binds to proteins just as SDS. The number of dye molecules incorporated with a protein depends on the dye concentration relative to SDS in the sample solution, since SDS and dye bind to proteins competitively. In this work, we synthesized a series of pseudo-SDS dyes, and tested their performances for capillary SDS-PAGE. FT-16 (a fluorescein molecule linked with a hexadodecyl group) seemed to be the best among all the dyes tested. Although the numbers of dye molecules bound to proteins (and the fluorescence signals from these protein complexes) were maximized in the absence of SDS, high-quality separations were obtained when co-complexes of SDS–protein–dye were formed. The migration time correlates well with protein size even after some of the SDS in the SDS–protein complexes was replaced by the pseudo-SDS dye. Under optimized experimental conditions and using a laser-induced fluorescence detector, limits of detection of as low as 0.13 ng/mL (bovine serum albumin) and dynamic ranges over 5 orders of magnitude in which fluorescence response is proportional to the square root of analyte concentration were obtained. The method and dye were also tested for separations of real-world samples from E. coli. PMID:17874848

  4. Behaviour Of Saline Irrigation Water Components In Pakistani Barley And Calcareous Soil Under Scheduling Irrigation Using Neutron Scattering Technique

    International Nuclear Information System (INIS)

    RIZK, M.A.

    2010-01-01

    This study aims to investigate the behaviour of cation uptake by Pakistani barley (genotype PK-30163) as affected by saline irrigation water, as well as cation distribution within the soil profile. This experiment was carried out at Soil and Water Research Department, Nuclear Research Centre, Atomic Energy Authority, Inshas, Egypt. The soil was transferred from Wadi Sudr (South Sinai, Egypt). It is salted affected soil (calcareous soil, EC = 4.3 dS/m) and was irrigated using ground water irrigation (12.5 dS/m). Nine used lysimeters were irrigated with three artificial saline water (0.3, 4 and 8 dS/m) using drip irrigation system. The irrigation schedule was carried out using neutron scattering technique according to the hydro physical properties of the soil. Pakistani barley (halophytic plant) was used to remove salts from the soil especially sodium cations. The cation uptake and cation distribution (Na, K, Ca, Mg) within the soil profile were studied.The data indicated that roots of barley collected within 0-15 cm layer showed high cation uptake that made the salt concentrations in this layer low. Sodium uptake ratio was 43, 37 and 47% from total cation uptake by using fresh water (0.3 dS/m), 4 and 8 dS/m, respectively. The maximum uptake for Na, K, Ca and Mg was 20.51, 19.13, 3.98 and 12.81 g/lys at 5.69, 3.05, 6.56 and 4.15 dS/m, respectively. It was found that Pakistani barley preferred Mg uptake rather than Ca uptake.

  5. Silicon induced Fe deficiency affects Fe, Mn, Cu and Zn distribution in rice (Oryza sativa L.) growth in calcareous conditions.

    Science.gov (United States)

    Carrasco-Gil, Sandra; Rodríguez-Menéndez, Sara; Fernández, Beatriz; Pereiro, Rosario; de la Fuente, Vicenta; Hernandez-Apaolaza, Lourdes

    2018-04-01

    A protective effect by silicon in the amelioration of iron chlorosis has recently been proved for Strategy 1 species, at acidic pH. However in calcareous conditions, the Si effect on Fe acquisition and distribution is still unknown. In this work, the effect of Si on Fe, Mn, Cu and Zn distribution was studied in rice (Strategy 2 species) under Fe sufficiency and deficiency. Plants (+Si or-Si) were grown initially with Fe, and then Fe was removed from the nutrient solution. The plants were then analysed using a combined approach including LA-ICP-MS images for each element of interest, the analysis of the Fe and Si concentration at different cell layers of root and leaf cross sections by SEM-EDX, and determining the apoplastic Fe, total micronutrient concentration and oxidative stress indexes. A different Si effect was observed depending on plant Fe status. Under Fe sufficiency, Si supply increased Fe root plaque formation, decreasing Fe concentration inside the root and increasing the oxidative stress in the plants. Therefore, Fe acquisition strategies were activated, and Fe translocation rate to the aerial parts was increased, even under an optimal Fe supply. Under Fe deficiency, +Si plants absorbed Fe from the plaque more rapidly than -Si plants, due to the previous activation of Fe deficiency strategies during the growing period (+Fe + Si). Higher Fe plaque formation due to Si supply during the growing period reduced Fe uptake and could activate Fe deficiency strategies in rice, making it more efficient against Fe chlorosis alterations. Silicon influenced Mn and Cu distribution in root. Copyright © 2018 Elsevier Masson SAS. All rights reserved.

  6. Calcareous Nannofossils and Variation of the Kuroshio Current in the Okinawa Tro ugh During the Last 14000 Years

    Directory of Open Access Journals (Sweden)

    Xin

    2005-01-01

    Full Text Available A quantitative census study on calcareous nannofossils from sediments of Site 1202 recovered by ODP Leg 195 and surface sediments from the East China Sea was carried out to obtain a high-resolution nannofossil record of the change of the Kuroshio Current during the late Quaternary. Two nannofossil ratio indices were designed and employed in this study: (1 ratio of Florisphaera profunda against F. profunda, Emiliania huxleyi and Gephyrocapsa oceanica (F-EG ratio as a nannofossil proxy of the Kuroshio Current, (2 ratio of G. oceanica against F. profunda and E. huxleyi and G. oceanica (G-FE ratio as a proxy of near-coast environment. Results from the 14 surface nannofossil samples demonstrate that the F-EG ratio is > 15% in the assemblage lying directly under the main route of the Kuroshio Current, whereas it is very low ( 30% were seen from all samples on the East China Sea continental shelf or from near-coast cores. Down hole nannofossil record from the top 60 mbsf sediment interval at ODP Hole 1202B reflects the change of the Kuroshio Current in the last glacial and postglacial period since 14 ka. Extreme low F-EG ratio together with very high G-FE ratio at Hole 1202B during the time of the latest Pleistocene and the earliest Holocene suggest the absence of the Kuroshio Current in the area studied. The event of intrusion of the Kuroshio Current was clearly recorded by a dramatically increase of F-EG ratio and notably a reduction in the G-FE ratio around 9 ka. Furthermore, based on the variation of the F-EG ratio and _ of planktonic foraminifera Neogloboquadrina dutertrei, variation of the Kuroshio Current in the Holocene shows three long-term cycles (with a periodicity of ~3000 yr.

  7. Effects of zinc complexes on the distribution of zinc in calcareous soil and zinc uptake by maize.

    Science.gov (United States)

    Alvarez, José M; Rico, María I

    2003-09-10

    The movement and availability of Zn from six organic Zn sources in a Typic Xerorthent (calcareous) soil were compared by incubation, column assay, and in a greenhouse study with maize (Zea mays L.). Zinc soil behavior was studied by sequential, diethylenetriaminepentaacetate, and Mehlich-3 extractions. In the incubation experiment, the differences in Zn concentration observed in the water soluble plus exchangeable fraction strongly correlated with Zn uptake by plants in the greenhouse experiment. Zinc applied to the surface of soil columns scarcely moved into deeper layers except for Zn-ethylenediaminetetraacetate (EDTA) that showed the greatest distribution of labile Zn throughout the soil and the highest proportion of leaching of the applied Zn. In the upper part of the column, changes in the chemical forms of all treatments occurred and an increase in organically complexed and amorphous Fe oxide-bound fractions was detected. However, the water soluble plus exchangeable fraction was not detected. The same results were obtained at the end of the greenhouse experiment. Significant increases were found in plant dry matter yield and Zn concentration as compared with the control treatment without Zn addition. Increasing Zn rate in the soil increased dry matter yield in all cases but Zn concentration in the plant increased only with Zn-EDTA and Zn-ethylenediaminedi-o-hydroxyphenyl-acetate (EDDHA) fertilizers. Higher Zn concentration in plants (50.9 mg kg(-)(1)) occurred when 20 mg Zn kg(-)(1) was added to the soil as Zn-EDTA. The relative effectiveness of the different Zn carriers in increasing Zn uptake was in the order: Zn-EDTA > Zn-EDDHA > Zn-heptagluconate >/= Zn-phenolate approximately Zn-polyflavonoid approximately Zn-lignosulfonate.

  8. Ground cover and tree growth on calcareous minesoils: Greater influence of soil surface than nitrogen rate or seed mix

    International Nuclear Information System (INIS)

    Kost, D.A.; Vimmerstedt, J.P.

    1994-01-01

    Growth of ground cover and trees was evaluated for five growing seasons on calcareous coal minesoil surfaces (standard graded topsoil, graded and ripped topsoil, graded gray cast overburden) in southeastern Ohio. Soil surface plots were seeded in September 1987 with either a standard herbaceous seed mix [orchardgrass (Dactylis glomerata L.), timothy (Phleum pratense L.), perennial ryegrass (Lolium perenne L.), Kentucky bluegrass (Poa pratensis L.), Ranger alfalfa (Medicago sativa L.), Mammoth red clover (Trifolium pratense L.), Empire birdsfoot trefoil (Lotus corniculatus L.), and wheat (Triticum aestivum L.)], or a modified mix using no alfalfa and half the rate of orchardgrass. Nitrogen (45, 90, or 135 kg ha/N) was applied as ammonium nitrate in September 1987 and April 1989. White ash (Fraxinus americana L.), silver maple (Acer saccharinum L.), northern red oak (Quercus rubra L.), and eastern white pine (Pinus strobus L.) were planted in spring 1989 into 0.8 m-wide strips sprayed with glyphosate herbicide at 2.24 kg/ha in October 1988. Total cover and total biomass were highest in July 1989, following the last application of nitrogen fertilizer in April 1989. Total cover ranged from 44% to 56%, and total biomass ranged from 102 to 162 g/0.5 m 2 from 1990 to 1993. Total cover and total biomass were lower at the lowest nitrogen rate in 1989 only. Type of herbaceous seed mix did not affect growth of ground cover or trees. Overall tree survival was 82.0% the first year but declined to 40.6% after 5 yr. Survival varied significantly among all tree species (3.5% for pine, 22.2% for oak, 38.5% for maple, 98.1% for ash)

  9. RESPONSE OF SOYBEANS AND WHEAT TO PHOSPHORUS FERTILIZATION ON CALCAREOUS ALLUVIAL SOIL OF SAVA VALLEY AREA IN BOSNIA AND HERZEGOVINA

    Directory of Open Access Journals (Sweden)

    Jurica JOVIC

    2015-08-01

    Full Text Available The stationary field experiment of increasing rates of phosphorus (P fertilization started in spring 2011 on calcareous alluvial soil of Posavian Canton in Federation of Bosnia and Herzegovina (B&H. The level of plant available P was found to be low by previous soil tests carried on with ammonium-lactate-method (7.06 pH in 1 M KCl; 4.17% organic matter; 3.79% CaCO3; 5.4 mg P2O5 in 100 g of soil. Five rates of P fertilizers (monoammonium phosphate: 13% N + 53 % P2O5 were applied as follows (kg P2O5 ha-1: a = 75 (basic fertilization, b = 225, c = 375, d = 525 and e = 975. The experiment was conducted in four replicates (basic plot 60 m2. Only basic fertilization was applied in the following years. Crop rotation was as follows: soybean (2011 - winter wheat (2012 + 2013. Soybean yield increased for 20% (2.11 and 2.53 t ha-1, respectively with P fertilization from 75 to 375 kg P2O5 ha-1, whereas further increase of P rates resulted with lower yield compared to the control level. In both years significant differences of wheat yields were found only between basic and each rate of the increased P fertilization. Wheat yields of the control group were 6.21 and 6.44 t ha-1, for the harvest of 2012 and 2013, respectively. P fertilization led to an increase in wheat yields up to 13% in 2012 and 15% in 2013. Mean values of wheat yields of four P treatments (b+c+d+e were 6.92 and 7.21 t ha-1 for 2012 and 2013, respectively.

  10. Redistribution of fractions of zinc, cadmium, nickel, copper, and lead in contaminated calcareous soils treated with EDTA.

    Science.gov (United States)

    Jalali, Mohsen; Khanlari, Zahra V

    2007-11-01

    Effect of ethylene diamine tetraacetic acid (EDTA) on the fractionation of zinc (Zn), cadmium (Cd), nickel (Ni), copper (Cu), and lead (Pb) in contaminated calcareous soils was investigated. Soil samples containing variable levels of contamination, from 105.9 to 5803 mg/kg Zn, from 2.2 to 1361 mg/kg Cd, from 31 to 64.0 mg/kg Ni, from 24 to 84 mg/kg Cu, and from 109 to 24,850 mg/kg Pb, were subjected to EDTA treatment at different dosages of 0, 1.0, and 2.0 g/kg. Metals in the incubated soils were fractionated after 5 months by a sequential extraction procedure, in which the metal fractions were experimentally defined as exchangeable (EXCH), carbonate (CARB), Mn oxide (MNO), Fe oxide (FEO), organic matter (OM), and residual (RES) fractions. In contaminated soils without EDTA addition, Zn, Ni, Cu, and Pb were predominately present in the RES fraction, up to 60.0%, 32.3%, 41.1%, and 36.8%, respectively. In general, with the EDTA addition, the EXCH and CARB fractions of these metals increased dramatically while the OM fraction decreased. The Zn, Ni, Cu, and Pb were distributed mostly in RES, OM, FEO, and CARB fractions in contaminated soils, but Cd was found predominately in the CARB, MNO, and RES fractions. The OM fraction decreased with increasing amounts of EDTA. In the contaminated soils, EDTA removed some Pb, Zn, Cu, and Ni from MNO, FEO, and OM fractions and redistributed them into CARB and EXCH fractions. Based on the relative percent in the EXCH and CARB fractions, the order of solubility was Cd > Pb > Ni > Cu > Zn for contaminated soils, before adding of EDTA, and after adding of EDTA, the order of solubility was Pb > Cd > Zn > Ni > Cu. The risk of groundwater contamination will increase after applying EDTA and it needed to be used very carefully.

  11. The interplay of stress and mowing disturbance for the intensity and importance of plant interactions in dry calcareous grasslands.

    Science.gov (United States)

    Maalouf, Jean-Paul; Le Bagousse-Pinguet, Yoann; Marchand, Lilian; Touzard, Blaise; Michalet, Richard

    2012-09-01

    There is still debate regarding the direction and strength of plant interactions under intermediate to high levels of stress. Furthermore, little is known on how disturbance may interact with physical stress in unproductive environments, although recent theory and models have shown that this interplay may induce a collapse of plant interactions and diversity. The few studies assessing such questions have considered the intensity of biotic interactions but not their importance, although this latter concept has been shown to be very useful for understanding the role of interactions in plant communities. The objective of this study was to assess the interplay between stress and disturbance for plant interactions in dry calcareous grasslands. A field experiment was set up in the Dordogne, southern France, where the importance and intensity of biotic interactions undergone by four species were measured along a water stress gradient, and with and without mowing disturbance. The importance and intensity of interactions varied in a very similar way along treatments. Under undisturbed conditions, plant interactions switched from competition to neutral with increasing water stress for three of the four species, whereas the fourth species was not subject to any significant biotic interaction along the gradient. Responses to disturbance were more species-specific; for two species, competition disappeared with mowing in the wettest conditions, whereas for the two other species, competition switched to facilitation with mowing. Finally, there were no significant interactions for any species in the disturbed and driest conditions. At very high levels of stress, plant performances become too weak to allow either competition or facilitation and disturbance may accelerate the collapse of interactions in dry conditions. The results suggest that the importance and direction of interactions are more likely to be positively related in stressful environments.

  12. Utility of Acridine Orange staining for detection of bacteria from positive blood cultures.

    Science.gov (United States)

    Neeraja, M; Lakshmi, V; Padmasri, C; Padmaja, K

    2017-08-01

    The diagnostic performance of AO stain was evaluated for the detection of bacteria and or fungi from positive blood cultures. The sensitivity of Gram stain (GS) was 98.26% while Acridine Orange (AO) stain proved to be more sensitive (100%) with a Positive and Negative Predictive Value of 100% each. The specificity of both the stains was 100%. Overall agreement between the two stains was 98.23% (688/700). The organisms that were missed by GS and positive by AO were Candida species (Sutton, 2006) and Gram negative bacilli (GNB) (Sutton, 2006). Sensitivity of GS was 82.35% and AO was 100% among mixed cultures. Immediate reporting of the results of AO stain would have a significant impact on clinical management of patients with serious blood stream infections. Copyright © 2017 Elsevier B.V. All rights reserved.

  13. An improved silver staining procedure for schizodeme analysis in polyacrylamide gradient gels

    Directory of Open Access Journals (Sweden)

    Antonio M. Gonçalves

    1990-03-01

    Full Text Available A simple protocol is described for the silver staining of polyacrylamide gradient gels used for the separation of restriction fragments of kinetoplast DNA [schizodeme analysis of trypanosomatids (Morel et al., 1980]. The method overcomes the problems of non-uniform staining and strong background color which are frequently encountered when conventional protocols for silver staining of linear gels. The method described has proven to be of general applicability for DNA, RNA and protein separations in gradient gels.

  14. Juvenile localized scleroderma with port wine stain: Coincidental or possible common pathogenetic association

    Directory of Open Access Journals (Sweden)

    Seval Dogruk Kacar

    2015-01-01

    Full Text Available Port wine stain and juvenile localized scleroderma are two different dermatoses usually encountered in pediatric age group. Up to now, there are reports of morphea patients initially diagnosed and treated as port wine stain. Coexistence of both diseases is not found yet. We herein present a case of juvenile localized scleroderma on the left side of trunk, with congenital port wine stain located on the ipsilateral face at V1-V2 distribution.

  15. Juvenile localized scleroderma with port wine stain: coincidental or possible common pathogenetic association.

    Science.gov (United States)

    Kacar, Seval Dogruk; Ozuguz, Pinar; Polat, Serap; Kacar, Emre; Polat, Onur; Tokyol, Cigdem

    2015-01-01

    Port wine stain and juvenile localized scleroderma are two different dermatoses usually encountered in pediatric age group. Up to now, there are reports of morphea patients initially diagnosed and treated as port wine stain. Coexistence of both diseases is not found yet. We herein present a case of juvenile localized scleroderma on the left side of trunk, with congenital port wine stain located on the ipsilateral face at V1-V2 distribution.

  16. Microbiology of liver abscesses and the predictive value of abscess gram stain and associated blood cultures.

    Science.gov (United States)

    Chemaly, Roy F; Hall, Gerri S; Keys, Thomas F; Procop, Gary W

    2003-08-01

    Although rare, pyogenic liver abscesses are potentially fatal. We evaluated the predictive value of Gram stain of liver abscess aspirates and temporally associated blood cultures. Gram stains detected bacteria in 79% of the liver abscesses tested. The sensitivity and specificity of Gram stain of the liver abscesses were 90% and 100% for Gram-positive cocci (GPC) and 52% and 94% for Gram-negative bacilli (GNB). The sensitivities of the blood cultures for any GPC and GNB present in the liver abscess were 30% and 39%, respectively. Although, Gram stains and blood cultures offer incomplete detection of the microbial contents of pyogenic liver abscesses, both tests should always accompany liver abscess cultures.

  17. A combined Bodian-Nissl stain for improved network analysis in neuronal cell culture.

    Science.gov (United States)

    Hightower, M; Gross, G W

    1985-11-01

    Bodian and Nissl procedures were combined to stain dissociated mouse spinal cord cells cultured on coverslips. The Bodian technique stains fine neuronal processes in great detail as well as an intracellular fibrillar network concentrated around the nucleus and in proximal neurites. The Nissl stain clearly delimits neuronal cytoplasm in somata and in large dendrites. A combination of these techniques allows the simultaneous depiction of neuronal perikarya and all afferent and efferent processes. Costaining with little background staining by either procedure suggests high specificity for neurons. This procedure could be exploited for routine network analysis of cultured neurons.

  18. The influence of vegetation structure on spider species richness, diversity and community organization in the Apšuciems calcareous fen, Latvia

    Directory of Open Access Journals (Sweden)

    Štokmane, M.

    2016-07-01

    Full Text Available Calcareous fens are considered to be among the most threatened ecosystems of Europe. They are also one of the most diverse habitats as they support an incredibly rich and diverse range of plant and animal species. However, in spite of their diversity, calcareous fens are still poorly investigated, especially when referring to fen invertebrates, such as spiders. Because spiders are good bioindicators, knowledge of their ecology in rare and threatened habitats is of interest. The aim of this study was to document the composition and diversity of spider species, families and foraging guilds in the ground– and grass–layers of the Apšuciems calcareous fen, and to evaluate the influence of vegetation structure on spider community organization. In summer 2012, we collected ground–dwelling spiders using pitfall traps and grass–dwelling spiders using sweep–netting. A total of 2,937 spider individuals belonging to 19 families and 80 species was collected in the Apšuciems fen. Our results indicate that spider species and families tend to be stratified across the vertical structure of the habitat; the spider composition in the ground stratum differed from that in the grass stratum. On the contrary, however, the spider foraging guild structure between the ground–layer and the grass–layer was similar. Each of the two studied strata presented similar guilds in similar proportions. Our results also showed that spider composition differed considerably between fen parts and that much of this variability could be explained by the architectural properties of the habitat. More diverse vegetation generally supported a higher number of spider species.

  19. Heavy metal accumulation by poplar in calcareous soil with various degrees of multi-metal contamination: implications for phytoextraction and phytostabilization.

    Science.gov (United States)

    Hu, Yahu; Nan, Zhongren; Su, Jieqiong; Wang, Ning

    2013-10-01

    The object of this study was to assess the capacity of Populus alba L. var. pyramidalis Bunge for phytoremediation of heavy metals on calcareous soils contaminated with multiple metals. In a pot culture experiment, a multi-metal-contaminated calcareous soil was mixed at different ratios with an uncontaminated, but otherwise similar soil, to establish a gradient of soil metal contamination levels. In a field experiment, poplars with different stand ages (3, 5, and 7 years) were sampled randomly in a wastewater-irrigated field. The concentrations of cadmium (Cd), Cu, lead (Pb), and zinc (Zn) in the poplar tissues and soil were determined. The accumulation of Cd and Zn was greatest in the leaves of P. pyramidalis, while Cu and Pb mainly accumulated in the roots. In the pot experiment, the highest tissue concentrations of Cd (40.76 mg kg(-1)), Cu (8.21 mg kg(-1)), Pb (41.62 mg kg(-1)), and Zn (696 mg kg(-1)) were all noted in the multi-metal-contaminated soil. Although extremely high levels of Cd and Zn accumulated in the leaves, phytoextraction using P. pyramidalis may take at least 24 and 16 years for Cd and Zn, respectively. The foliar concentrations of Cu and Pb were always within the normal ranges and were never higher than 8 and 5 mg kg(-1), respectively. The field experiment also revealed that the concentrations of all four metals in the bark were significantly higher than that in the wood. In addition, the tissue metal concentrations, together with the NH4NO3-extractable concentrations of metals in the root zone, decreased as the stand age increased. P. pyramidalis is suitable for phytostabilization of calcareous soils contaminated with multiple metals, but collection of the litter fall would be necessary due to the relatively high foliar concentrations of Cd and Zn.

  20. Preoperative digital planning versus postoperative outcomes in total hip arthroplasty using a calcar-guided short stem: frequent valgization can be avoided.

    Science.gov (United States)

    Kutzner, Karl Philipp; Pfeil, Joachim; Kovacevic, Mark Predrag

    2017-07-01

    Modern total hip arthroplasty is largely dependent on the successful preservation of hip geometry. Thus, a successful implementation of the preoperative planning is of great importance. The present study evaluates the accuracy of anatomic hip reconstruction predicted by 2D digital planning using a calcar-guided short stem of the newest generation. A calcar-guided short stem was implanted in 109 patients in combination with a cementless cup using the modified anterolateral approach. Preoperative digital planning was performed including implant size, caput-collum-diaphyseal angle, offset, and leg length using mediCAD II software. A coordinate system and individual scale factors were implemented. Postoperative outcome was evaluated accordingly and was compared to the planning. Intraoperatively used stem sizes were within one unit of the planned stem sizes. The postoperative stem alignment showed a minor and insignificant (p = 0.159) mean valgization of 0.5° (SD 3.79°) compared to the planned caput-collum-diaphyseal angles. Compared to the planning, mean femoral offset gained 2.18 (SD 4.24) mm, while acetabular offset was reduced by 0.78 (SD 4.36) mm during implantation resulting in an increased global offset of 1.40 (SD 5.51) mm (p = 0.0094). Postoperative femoroacetabular height increased by a mean of 5.00 (SD 5.98) mm (p planning in calcar-guided short-stem total hip arthroplasty assures a satisfying implementation of the intended anatomy. Valgization, which has been frequently observed in previous short-stem designs, negatively affecting offset, can be avoided. However, surgeons have to be aware of a possible leg lengthening.

  1. The influence of vegetation structure on spider species richness, diversity and community organization in the Apšuciems calcareous fen, Latvia

    Energy Technology Data Exchange (ETDEWEB)

    Štokmane, M.; Spuņģis, V.

    2016-07-01

    Calcareous fens are considered to be among the most threatened ecosystems of Europe. They are also one of the most diverse habitats as they support an incredibly rich and diverse range of plant and animal species. However, in spite of their diversity, calcareous fens are still poorly investigated, especially when referring to fen invertebrates, such as spiders. Because spiders are good bioindicators, knowledge of their ecology in rare and threatened habitats is of interest. The aim of this study was to document the composition and diversity of spider species, families and foraging guilds in the ground– and grass–layers of the Apšuciems calcareous fen, and to evaluate the influence of vegetation structure on spider community organization. In summer 2012, we collected ground–dwelling spiders using pitfall traps and grass–dwelling spiders using sweep–netting. A total of 2,937 spider individuals belonging to 19 families and 80 species was collected in the Apšuciems fen. Our results indicate that spider species and families tend to be stratified across the vertical structure of the habitat; the spider composition in the ground stratum differed from that in the grass stratum. On the contrary, however, the spider foraging guild structure between the ground–layer and the grass–layer was similar. Each of the two studied strata presented similar guilds in similar proportions. Our results also showed that spider composition differed considerably between fen parts and that much of this variability could be explained by the architectural properties of the habitat. More diverse vegetation generally supported a higher number of spider species. (Author)

  2. Physical behaviour of calcareous nannofossil ooze and effects of clay and organic matter on pelagic sediment stability: experimental approach using laboratory flumes

    DEFF Research Database (Denmark)

    Buls, Toms

    This thesis explores the subject of physical behaviour of ancient calcareous nannofossil ooze that eventually formed kilometre-thick Upper Cretaceous chalk succession over vast areas of NW Europe and more than 65 Ma years later forms valuable hydrocarbon and ground-water reservoirs. This thesis...... porosity range (85–60 %). A transition from simple to complex erosional behaviour has been identified mostly when bed porosity decreases below 80 %. This complex erosion required definition of multiple erosion thresholds. Typically, erosion thresholds were increasing with decreasing bed porosity...

  3. Calcareous nannoplankton dating of the Late Quaternary deposits in Greece and the eastern Mediterranean: Case studies from terrestrial and marine sites

    Directory of Open Access Journals (Sweden)

    Maria V. Triantaphyllou

    2015-10-01

    Full Text Available The distribution and abundance of Emiliania huxleyi (E. huxleyi assemblages in the marine sediments of the Aravonitsa Plateau, Greece, and from the eastern Mediterranean are used (1 to evaluate the calcareous nannoplankton NN21a and NN21b biozones and the NN21a/NN21b boundary, and (2 to analyze the palaeoenvironmental and palaeoclimatic conditions prevailing in this interval. The sediment succession displays varied E. huxleyi assemblages and these are interpreted as reflecting climatic variability during marine isotope stages MIS 1–8.

  4. Comparison of algorithms for blood stain detection applied to forensic hyperspectral imagery

    Science.gov (United States)

    Yang, Jie; Messinger, David W.; Mathew, Jobin J.; Dube, Roger R.

    2016-05-01

    Blood stains are among the most important types of evidence for forensic investigation. They contain valuable DNA information, and the pattern of the stains can suggest specifics about the nature of the violence that transpired at the scene. Early detection of blood stains is particularly important since the blood reacts physically and chemically with air and materials over time. Accurate identification of blood remnants, including regions that might have been intentionally cleaned, is an important aspect of forensic investigation. Hyperspectral imaging might be a potential method to detect blood stains because it is non-contact and provides substantial spectral information that can be used to identify regions in a scene with trace amounts of blood. The potential complexity of scenes in which such vast violence occurs can be high when the range of scene material types and conditions containing blood stains at a crime scene are considered. Some stains are hard to detect by the unaided eye, especially if a conscious effort to clean the scene has occurred (we refer to these as "latent" blood stains). In this paper we present the initial results of a study of the use of hyperspectral imaging algorithms for blood detection in complex scenes. We describe a hyperspectral imaging system which generates images covering 400 nm - 700 nm visible range with a spectral resolution of 10 nm. Three image sets of 31 wavelength bands were generated using this camera for a simulated indoor crime scene in which blood stains were placed on a T-shirt and walls. To detect blood stains in the scene, Principal Component Analysis (PCA), Subspace Reed Xiaoli Detection (SRXD), and Topological Anomaly Detection (TAD) algorithms were used. Comparison of the three hyperspectral image analysis techniques shows that TAD is most suitable for detecting blood stains and discovering latent blood stains.

  5. [Comparison of four different staining methods for ear cytology of dogs with otitis externa].

    Science.gov (United States)

    Bouassiba, C; Osthold, W; Mueller, R S

    2013-01-01

    Cytological examination is crucial for the diagnosis and classification of canine otitis externa. Staining should reveal micro-organisms as perpetuating factors of otitis externa. The aim of the study was to compare four different staining methods (Diff-Quik®, Diff-Quik® after dipping in acetone, Gram Quick stain® and a commercial rapid stain for otitis externa) for ear cytology of dogs with otitis externa and to investigate the agreement of cytology and culture. In a study evaluating dogs with otitis externa, five ear swabs (one for culture and four for cytology) were taken from the horizontal part of the external auditory canal of 224 affected ears and compared semi-quantitatively. Diff-Quik® with and without prior dipping in acetone as well as the Gram Quick stain® displayed a high degree of agreement in the detection of micro-organisms (cocci p = 0.2366; rods p = 0.4832; yeasts p = 0.1574), while the commercial otitis rapid stain revealed significantly less micro-organisms (p stains corresponded to the culture results by >  70%; the agreement was lower with the commercial otitis rapid stain. The quickest and easiest method was staining with Diff-Quik®. Diff-Quik® with or without prior dipping in acetone and the Gram Quick stain® had a high agreement in the detection of microorganisms and can thus be considered nearly equivalent for the diagnosis of otitis externa infectiosa. The commercial otitis rapid stain is less reliable. Based on this study Diff-Quik® can be recommended for the routine cytology of ear swabs. Additionally, a culture may be indicated and must be interpreted in the context of the cytology.

  6. Staining of proteins in gels with Coomassie G-250 without organic solvent and acetic acid.

    Science.gov (United States)

    Lawrence, Ann-Marie; Besir, H Uuml Seyin

    2009-08-14

    In classical protein staining protocols using Coomassie Brilliant Blue (CBB), solutions with high contents of toxic and flammable organic solvents (Methanol, Ethanol or 2-Propanol) and acetic acid are used for fixation, staining and destaining of proteins in a gel after SDS-PAGE. To speed up the procedure, heating the staining solution in the microwave oven for a short time is frequently used. This usually results in evaporation of toxic or hazardous Methanol, Ethanol or 2-Propanol and a strong smell of acetic acid in the lab which should be avoided due to safety considerations. In a protocol originally published in two patent applications by E.M. Wondrak (US2001046709 (A1), US6319720 (B1)), an alternative composition of the staining solution is described in which no organic solvent or acid is used. The CBB is dissolved in bidistilled water (60-80 mg of CBB G-250 per liter) and 35 mM HCl is added as the only other compound in the staining solution. The CBB staining of the gel is done after SDS-PAGE and thorough washing of the gel in bidistilled water. By heating the gel during the washing and staining steps, the process can be finished faster and no toxic or hazardous compounds are evaporating. The staining of proteins occurs already within 1 minute after heating the gel in staining solution and is fully developed after 15-30 min with a slightly blue background that is destained completely by prolonged washing of the stained gel in bidistilled water, without affecting the stained protein bands.

  7. Mechanisms of superficial micropunctate corneal staining with sodium fluorescein: the contribution of pooling.

    Science.gov (United States)

    Bandamwar, Kalika L; Garrett, Qian; Papas, Eric B

    2012-04-01

    To establish if sodium fluorescein (SFL) dye accumulation within intercellular spaces on the ocular surface contributes to the appearance of superficial punctate corneal staining. Thirteen subjects bilaterally wore PureVision™ lenses that had been pre-soaked in ReNu MultiPlus® multipurpose solution. After 1h of lens wear, corneal staining with SFL was assessed using a standard slit-lamp technique. Participants who presented with bilateral, corneal staining were selected for further evaluation. A randomly selected eye was rinsed with saline three times. Fellow eyes (control) received no rinsing. After each rinse, the appearance of SFL staining was recorded without any further instillation of the dye. To eliminate any confounding effects of staining due to residual fluorescein in the tear menisci, corneal staining was induced in freshly excised, isolated, rabbit eyes by topical administration of 0.001% PHMB and staining, rinsing and grading were performed as above. Nine out of 13 subjects presented with bilateral diffuse corneal staining (mean grade±SD: 2.4±0.7). The mean staining grades in test and control eyes respectively after each of the three rinses were (1) 2.41±0.41, 2.25±0.69 (p=0.9); (2) 2.34±0.79, 2.1±0.83 (p=0.8); and (3) 1.71±0.65, 1.60±0.79 (p=0.6) there was no significant reduction in staining with rinsing (p>0.05) and no difference was observed between test and control eyes at any sampling-point. Similar observations made in ex vivo rabbit eyes replicated these results. Pooling or accumulation of SFL solution within intercellular spaces does not appear to contribute to the appearance of superficial micropunctate corneal staining. Copyright © 2011 British Contact Lens Association. Published by Elsevier Ltd. All rights reserved.

  8. Geochemical response of a calcareous fen to road salt contamination during snow melt and precipitation events: Kampoosa Bog, Stockbridge, MA

    Science.gov (United States)

    Rhodes, A. L.; Guswa, A. J.

    2008-12-01

    Kampoosa Bog is the largest and most diverse calcareous lake-basin fen remaining in Massachusetts, and it is one of the state's elite Areas of Critical Environmental Concern (ACEC). The ground water chemistry of the fen has been greatly altered by road salt runoff (NaCl) from the Massachusetts Turnpike, which crosses the northern margin of the wetland complex. Ground water samples collected at different depths within the wetland, measurements of exchangeable Na from an eight-meter core, and hydraulic conductivity measurements suggest that ground water flow and contamination is largely a near- surface phenomenon. Detailed sampling of surface and ground waters during three spring snow melt events and one precipitation event characterizes the geochemical response of the wetland to hydrologic events. Overall, Na:Cl ratios for surface and ground water samples are less than one, and sodium and chloride imbalances suggest that 20-30% of sodium from rock salt is stored on cation exchange sites on organic material. Na:Cl ratios greater than one for fen ground water sampled during Snow Melt 2007 suggest that sodium can be released from cation exchange sites back to ground water under dilute conditions. The total mass of Na and Cl exported from the wetland is greatest under conditions of high discharge. The flux of dissolved salts at the outlet of the fen during Snow Melt 2005 accounts for ~ 24% Na and ~ 32% Cl of rock salt added to the Massachusetts Turnpike during 2004-2005. Estimates of annual fluxes of Na and Cl are on par with the amount of road salt applied, and sodium and chloride concentrations in shallow groundwater have decreased since 2002. The months of March, April and May are the primary months for salt export, accounting for more than half of the annual salt flux in 2005. Concerning the annual net export of sodium and chloride, large rain events may be more important with removing dissolved salts from the fen than snow melt because snow melt also is a time when

  9. Effects of CO2-driven acidification of seawater on the calcification process in the calcareous hydrozoan Millepora alcicornis (Linnaeus, 1758)

    Science.gov (United States)

    de Barros Marangoni, Laura Fernandes; Calderon, Emiliano Nicolas; Marques, Joseane Aparecida; Duarte, Gustavo Adolpho Santos; Pereira, Cristiano Macedo; e Castro, Clovis Barreira; Bianchini, Adalto

    2017-12-01

    Ocean acidification is expected to intensify due to increasing levels in the partial pressure of atmospheric CO2 ( pCO2). This could negatively affect major calcifying reef organisms. In this study, the effects of different levels of CO2-driven acidification of seawater (control: pH 8.1; moderate: pH 7.8; intermediate: pH 7.5; and severe: pH 7.2) on the net calcification rate and activity of enzymes related to the calcification process (Ca-ATPase and carbonic anhydrase) were evaluated in the calcareous hydrozoan Millepora alcicornis. The experiment was run for 30 d using a marine mesocosm system. Net calcification ratio was significantly reduced in hydrocorals exposed to intermediate seawater acidification for 16 d and to severe seawater acidification for 16 d or 30 d, compared to animals at control conditions. However, only hydrocorals exposed to severe seawater acidification showed lower net calcification rates than those exposed to control conditions for 30 d. In accordance, the activities of enzymes involved in the calcification process markedly increased in hydrocorals exposed to reduced pH. Ca-ATPase seemed to be more sensitive to seawater acidification than carbonic anhydrase as it increased in hydrocorals exposed to intermediate and severe seawater acidification for 30 d, while carbonic anhydrase activity was only stimulated under severe seawater acidification. Therefore, our findings clearly show that the hydrocoral M. alcicornis is able to cope, to some extent, with long-term CO2-driven acidification of seawater (pH ≥ 7.5). In addition, they show that Ca-ATPase plays a key role in the maintenance of calcification rate under scenarios of moderate and intermediate levels of seawater acidification. However, the observed increase in Ca-ATPase and carbonic anhydrase activity was not enough to compensate for the effects of CO2-driven reduction in seawater pH on the net calcification rate of the hydrocoral M. alcicornis under a scenario of severe ocean

  10. Formation of Zn-rich phyllosilicate, Zn-layered double hydroxide and hydrozincite in contaminated calcareous soils

    Energy Technology Data Exchange (ETDEWEB)

    Jacquat, Olivier; Voegelin, Andreas; Villard, Andre; Marcus, Matthew A.; Kretzschmar, Ruben

    2007-10-15

    Recent studies demonstrated that Zn-phyllosilicate- and Zn-layered double hydroxide-type (Zn-LDH) precipitates may form in contaminated soils. However, the influence of soil properties and Zn content on the quantity and type of precipitate forming has not been studied in detail so far. In this work, we determined the speciation of Zn in six carbonate-rich surface soils (pH 6.2 to 7.5) contaminated by aqueous Zn in the runoff from galvanized power line towers (1322 to 30090 mg/kg Zn). Based on 12 bulk and 23 microfocused extended X-ray absorption fine structure (EXAFS) spectra, the number, type and proportion of Zn species were derived using principal component analysis, target testing, and linear combination fitting. Nearly pure Zn-rich phyllosilicate and Zn-LDH were identified at different locations within a single soil horizon, suggesting that the local availabilities of Al and Si controlled the type of precipitate forming. Hydrozincite was identified on the surfaces of limestone particles that were not in direct contact with the soil clay matrix. With increasing Zn loading of the soils, the percentage of precipitated Zn increased from {approx}20% to {approx}80%, while the precipitate type shifted from Zn-phyllosilicate and/or Zn-LDH at the lowest studied soil Zn contents over predominantly Zn-LDH at intermediate loadings to hydrozincite in extremely contaminated soils. These trends were in agreement with the solubility of Zn in equilibrium with these phases. Sequential extractions showed that large fractions of soil Zn ({approx}30% to {approx}80%) as well as of synthetic Zn-kerolite, Zn-LDH, and hydrozincite spiked into uncontaminated soil were readily extracted by 1 M NH{sub 4}NO{sub 3} followed by 1 M NH{sub 4}-acetate at pH 6.0. Even though the formation of Zn precipitates allows for the retention of Zn in excess to the adsorption capacity of calcareous soils, the long-term immobilization potential of these precipitates is limited.

  11. Marine Red Staining of a Pennsylvanian Carbonate Slope: Environmental and Oceanographic Significance

    NARCIS (Netherlands)

    van der Kooij, B.; Immenhauser, A.M.; Steuber, T; Hagmaier, M.; Bahamonde, J.R.; Samankassou, E.; Merino Tomé, O.

    2007-01-01

    Red-stained platform facies are a common feature of many carbonate settings throughout the geological record. Although the mechanisms involved in red staining of subaerially exposed or argillaceous, peri-platforin limestones are reasonably well understood, the environmental and oceanographic

  12. Identification and age estimation of blood stains on colored backgrounds by near infrared spectroscopy

    NARCIS (Netherlands)

    Edelman, Gerda; Manti, Vicky; van Ruth, Saskia M.; van Leeuwen, Ton; Aalders, Maurice

    2012-01-01

    Non-destructive identification and subsequent age estimation of blood stains are significant steps in forensic casework. The latter can provide important information on the temporal aspects of a crime. As previously shown, visible spectroscopy of blood stains on white backgrounds can successfully be

  13. Touch cytology in diagnosing Helicobacter pylori: comparison of four staining methods.

    Science.gov (United States)

    Hashemi, M R; Rahnavardi, M; Bikdeli, B; Dehghani Zahedani, M; Iranmanesh, F

    2008-06-01

    Helicobacter pylori (Hp), a major cause of peptic ulcer disease and an important risk factor for gastric malignancy, can be diagnosed by several methods. Touch cytology (TC) of the gastric mucosa has been noted to give good results and has been found to be very simple, inexpensive and rapid. However, evidence regarding the accuracy of different staining methods of TC is lacking. The present study aims at defining the diagnostic accuracy of four different staining methods of TC. Biopsy specimens were taken from the antral mucosa of one hundred consecutive patients referred for upper gastrointestinal endoscopy (UGIE) for various indications. TC slides were processed by four staining methods: Wright, Giemsa, Papanicolaou and Gram. Rapid urease test (RUT) and histological examination of specimens were also performed. The same experienced pathologist evaluated the coded samples. A patient's Hp status was established by minimum concordance of the three tests, including histology, RUT, and 'Touch mean'. The latter was defined positive when at least three of the four TC staining methods were positive. Forty-six patients (46%) were positive for Hp according to Hp status. TC stained by Wright had excellent agreement with both histology (kappa = 0.80, P stained TC (88.89%) was significantly more specific than both Giemsa- (74.07%; P stained (70.37%; P stained TC can safely substitute for histology. However, when assessment for severity of mucosal damage or cell atypias is meant, histology cannot be neglected.

  14. Red alder kitchen cabinets—How does application of commercial stains influence customer choice?

    Science.gov (United States)

    David Nicholls; Joseph. Roos

    2007-01-01

    A better understanding of consumer reaction and preferences for red alder (Alnus rubra Bong.) secondary products will help Alaska producers in entering new markets. In this study, red alder kitchen cabinets were commercially stained to six different levels and displayed at home shows in Portland, Oregon, and Anchorage, Alaska. The stains simulated...

  15. Complete staining of human spermatozoa and immature germ cells combined with phase contrast microscopy

    DEFF Research Database (Denmark)

    Michael, A Y; Drejer, J O; Bagger, P V

    1987-01-01

    A method combining Janus green B and Thymol blue stains the anterior part of the head, the nuclear membrane, middle piece, and tail of spermatozoa light green and the nucleus deep purple. The method provides excellent stained preparations for the evaluation of sperm morphology by phase contrast...

  16. Supravital dithizone staining in the isolation of human and rat pancreatic islets

    DEFF Research Database (Denmark)

    Hansen, W A; Christie, M R; Kahn, R

    1989-01-01

    Dithizone, a zinc chelating agent, is known to selectively stain the islets of Langerhans in the pancreas. In the present study, we have used this stain to aid the identification of islets in material obtained by collagenase digestion of human pancreas. Islets were shown to rapidly and reversibly...... techniques for the large scale isolation of functionally intact human islets....

  17. Combined histochemical staining, RNA amplification, regional, and single cell cDNA analysis within the hippocampus.

    Science.gov (United States)

    Ginsberg, Stephen D; Che, Shaoli

    2004-08-01

    The use of five histochemical stains (cresyl violet, thionin, hematoxylin & eosin, silver stain, and acridine orange) was evaluated in combination with an expression profiling paradigm that included regional and single cell analyses within the hippocampus of post-mortem human brains and adult mice. Adjacent serial sections of human and mouse hippocampus were labeled by histochemistry or neurofilament immunocytochemistry. These tissue sections were used as starting material for regional and single cell microdissection followed by a newly developed RNA amplification procedure (terminal continuation (TC) RNA amplification) and subsequent hybridization to custom-designed cDNA arrays. Results indicated equivalent levels of global hybridization signal intensity and relative expression levels for individual genes for hippocampi stained by cresyl violet, thionin, and hematoxylin & eosin, and neurofilament immunocytochemistry. Moreover, no significant differences existed between the Nissl stains and neurofilament immunocytochemistry for individual CA1 neurons obtained via laser capture microdissection. In contrast, a marked decrement was observed in adjacent hippocampal sections stained for silver stain and acridine orange, both at the level of the regional dissection and at the CA1 neuron population level. Observations made on the cDNA array platform were validated by real-time qPCR using primers directed against beta-actin and glyceraldehyde-3 phosphate dehydrogenase. Thus, this report demonstrated the utility of using specific Nissl stains, but not stains that bind RNA species directly, in both human and mouse brain tissues at the regional and cellular level for state-of-the-art molecular fingerprinting studies.

  18. Advances in Automated Plankton Imaging: Enhanced Throughput, Automated Staining, and Extended Deployment Modes for Imaging FlowCytobot

    Science.gov (United States)

    Sosik, H. M.; Olson, R. J.; Brownlee, E.; Brosnahan, M.; Crockford, E. T.; Peacock, E.; Shalapyonok, A.

    2016-12-01

    Imaging FlowCytobot (IFCB) was developed to fill a need for automated identification and monitoring of nano- and microplankton, especially phytoplankton in the size range 10 200 micrometer, which are important in coastal blooms (including harmful algal blooms). IFCB uses a combination of flow cytometric and video technology to capture high resolution (1 micrometer) images of suspended particles. This proven, now commercially available, submersible instrument technology has been deployed in fixed time series locations for extended periods (months to years) and in shipboard laboratories where underway water is automatically analyzed during surveys. Building from these successes, we have now constructed and evaluated three new prototype IFCB designs that extend measurement and deployment capabilities. To improve cell counting statistics without degrading image quality, a high throughput version (IFCB-HT) incorporates in-flow acoustic focusing to non-disruptively pre-concentrate cells before the measurement area of the flow cell. To extend imaging to all heterotrophic cells (even those that do not exhibit chlorophyll fluorescence), Staining IFCB (IFCB-S) incorporates automated addition of a live-cell fluorescent stain (fluorescein diacetate) to samples before analysis. A horizontally-oriented IFCB-AV design addresses the need for spatial surveying from surface autonomous vehicles, including design features that reliably eliminate air bubbles and mitigate wave motion impacts. Laboratory evaluation and test deployments in waters near Woods Hole show the efficacy of each of these enhanced IFCB designs.

  19. [Living better or living longer].

    Science.gov (United States)

    Sauvy, A

    1987-01-01

    It has been just 2 centuries since France began to struggle seriously against mortality and excess fertility. Life expectancy, which for millenia had been under 30 years at birth, began to increase because of the discovery of effective treatments, improved production and standards of living, and access of large numbers of persons to health care. France, in the 2nd half of the 18th century, became the first country in which fertility regulation was achieved on a wide scale. The failure of England, a country of similar culture, to follow suit until a century later remains unexplained. After World War II, simple and fairly inexpensive means of mortality control, such as vaccines and water purifiers, became widely distributed throughout the developing world. These countries, which traditionally had mortality rates of 35 or 40/1000 and fertility of 40-45/1000, experienced rapid declines in mortality rates while their fertility remained constant or even increased. Because antinatal techniques diffused so much more slowly, the equilibrium of births and deaths was disturbed as rates of increase of 2 or 3% per year became common. Although the inhabitants of poor countries were not concerned, perhaps through ignorance of what was occurring, the rich countries were alarmed by the increase. Their principal objective became to spread contraception in the poor countries. The available methods at the time, however, were none too reliable. When oral contraceptive pills became available, fertility dropped to very low levels in Europe but such factors as cost and illiteracy discouraged use in many underdeveloped countries. Fertility declined in a few insular states such as Hong Kong, Taiwan, and Singapore even before the appearance of pills. Life expectancies in developing countries except a few in Africa have increased since World War II and are now higher than in Europe at the turn of the century. "Health for all by the year 2000" is an astonishing slogan for a serious

  20. Proposals for best-quality immunohistochemical staining of paraffin-embedded brain tissue slides in forensics.

    Science.gov (United States)

    Trautz, Florian; Dreßler, Jan; Stassart, Ruth; Müller, Wolf; Ondruschka, Benjamin

    2018-01-03

    Immunohistochemistry (IHC) has become an integral part in forensic histopathology over the last decades. However, the underlying methods for IHC vary greatly depending on the institution, creating a lack of comparability. The aim of this study was to assess the optimal approach for different technical aspects of IHC, in order to improve and standardize this procedure. Therefore, qualitative results from manual and automatic IHC staining of brain samples were compared, as well as potential differences in suitability of common IHC glass slides. Further, possibilities of image digitalization and connected issues were investigated. In our study, automatic staining showed more consistent staining results, compared to manual staining procedures. Digitalization and digital post-processing facilitated direct analysis and analysis for reproducibility considerably. No differences were found for different commercially available microscopic glass slides regarding suitability of IHC brain researches, but a certain rate of tissue loss should be expected during the staining process.

  1. Preparation of colloidal gold for staining proteins electrotransferred onto nitrocellulose membranes.

    Science.gov (United States)

    Yamaguchi, K; Asakawa, H

    1988-07-01

    This paper describes a simple method of preparing colloidal gold for staining protein blots. Colloidal gold was prepared from 0.005 or 0.01% HAuCl4 by the addition of formalin as a reductant and potassium hydroxide. Staining of small cell carcinoma tissue extract blotted onto nitrocellulose membranes with this colloidal gold solution resulted in the appearance of a large number of clear wine-red bands. The sensitivity of gold staining was 60 times higher than that of Coomassie brilliant blue staining and almost comparable to that of silver staining of proteins in polyacrylamide gel. The sensitivity of this method was also satisfactory in comparison with that of enzyme immunoblotting. The colloidal gold prepared by this method is usable for routine work.

  2. Cell wall staining with Trypan blue enables quantitative analysis of morphological changes in yeast cells

    DEFF Research Database (Denmark)

    Liesche, Johannes; Marek, Magdalena; Günther-Pomorski, Thomas

    2015-01-01

    staining with fluorescent dyes is a valuable tool. Furthermore, cell wall staining is used to facilitate sub-cellular localization experiments with fluorescently-labeled proteins and the detection of yeast cells in non-fungal host tissues. Here, we report staining of Saccharomyces cerevisiae cell wall......Yeast cells are protected by a cell wall that plays an important role in the exchange of substances with the environment. The cell wall structure is dynamic and can adapt to different physiological states or environmental conditions. For the investigation of morphological changes, selective...... with Trypan Blue, which emits strong red fluorescence upon binding to chitin and yeast glucan; thereby, it facilitates cell wall analysis by confocal and super-resolution microscopy. The staining pattern of Trypan Blue was similar to that of the widely used UV-excitable, blue fluorescent cell wall stain...

  3. Optimal staining methods for delineation of cortical areas and neuron counts in human brains.

    Science.gov (United States)

    Uylings, H B; Zilles, K; Rajkowska, G

    1999-04-01

    For cytoarchitectonic delineation of cortical areas in human brain, the Gallyas staining for somata with its sharp contrast between cell bodies and neuropil is preferable to the classical Nissl staining, the more so when an image analysis system is used. This Gallyas staining, however, does not appear to be appropriate for counting neuron numbers in pertinent brain areas, due to the lack of distinct cytological features between small neurons and glial cells. For cell counting Nissl is preferable. In an optimal design for cell counting at least both the Gallyas and the Nissl staining must be applied, the former staining for cytoarchitectural delineaton of cortical areas and the latter for counting the number of neurons in the pertinent cortical areas. Copyright 1999 Academic Press.

  4. Ocular melanoma metastatic to skin: the value of HMB-45 staining.

    Science.gov (United States)

    Schwartz, Robert A; Kist, Joseph M; Thomas, Isabelle; Fernández, Geover; Cruz, Manuel A; Koziorynska, Ewa I; Lambert, W Clark

    2004-06-01

    Cutaneous metastatic disease is an important finding that may represent the first sign of systemic cancer, or, if already known, that may change tumor staging and thus dramatically altered therapeutic plans. Although cutaneous metastases are relatively frequent in patients with cutaneous melanoma, they are less so from ocular melanoma. To demonstrate the value of HMB-45, staining in the detection of ocular melanoma metastatic to skin. The immunohistochemical stain HMB-45 a monoclonal antibody directed against intact human melanoma cells, was employed on a skin biopsy specimen from a cutaneous tumor. HMB-45 staining was positive in the atypical hyperchromatic cells of the deep dermis. HMB-45 may be of value in the detection of ocular melanoma metastatic to skin. Cutaneous metastatic disease is a somewhat common and extremely important diagnosis. Although cutaneous metastases from cutaneous melanoma are relatively frequent, those from ocular melanomas are less so. Use of histochemical staining, especially the HMB-45 stain, allows confirmation of the diagnosis.

  5. Should gram stains have a role in diagnosing hip arthroplasty infections?

    Science.gov (United States)

    Johnson, Aaron J; Zywiel, Michael G; Stroh, D Alex; Marker, David R; Mont, Michael A

    2010-09-01

    The utility of Gram stains in diagnosing periprosthetic infections following total hip arthroplasty has recently been questioned. Several studies report low sensitivity of the test, and its poor ability to either confirm or rule out infection in patients undergoing revision total hip arthroplasty. Despite this, many institutions including that of the senior author continue to perform Gram stains during revision total hip arthroplasty. We assessed the sensitivity, specificity, accuracy, and positive and negative predictive values of Gram stains from surgical-site samplings taken from procedures on patients with both infected and aseptic revision total hip arthroplasties. A review was performed on patients who underwent revision total hip arthroplasty between 2000 and 2007. Eighty-two Gram stains were performed on patients who had infected total hip arthroplasties and underwent revision procedures. Additionally, of the 410 revision total hip arthroplasties performed on patients who were confirmed infection-free, 120 Gram stains were performed. Patients were diagnosed as infected using multiple criteria at the time of surgery. Sensitivity, specificity, positive and negative predictive values, and accuracy were calculated from these Gram stain results. The Gram stain demonstrated a sensitivity and specificity of 9.8% and 100%, respectively. In this series, the Gram stain had a negative predictive value of 62%, a positive predictive value of 100%, and an accuracy of 63%. Gram stains obtained from surgical-site samples had poor sensitivity and poor negative predictive value. Based on these findings, as well as those of other authors, we believe that Gram stains should no longer be considered for diagnosing infections in revision total hip arthroplasty. Level III, diagnostic study. See Guidelines for Authors for a complete description of levels of evidence.

  6. Porcine intestinal mast cells. Evaluation of different fixatives for histochemical staining techniques considering tissue shrinkage

    Directory of Open Access Journals (Sweden)

    J. Rieger

    2013-07-01

    Full Text Available Staining of mast cells (MCs, including porcine ones, is critically dependent upon the fixation and staining technique. In the pig, mucosal and submucosal MCs do not stain or stain only faintly after formalin fixation. Some fixation methods are particularly recommended for MC staining, for example the fixation with Carnoy or lead salts. Zinc salt fixation (ZSF has been reported to work excellently for the preservation of fixation-sensitive antigens. The aim of this study was to establish a reliable histological method for counting of MCs in the porcine intestinum. For this purpose, different tissue fixation and staining methods that also allow potential subsequent immunohistochemical investigations were evaluated in the porcine mucosa, as well as submucosa of small and large intestine. Tissues were fixed in Carnoy, lead acetate, lead nitrate, Zamboni and ZSF and stained subsequently with either polychromatic methylene blue, alcian blue or toluidine blue. For the first time our study reveals that ZSF, a heavy metal fixative, preserves metachromatic staining of porcine MCs. Zamboni fixation was not suitable for histochemical visualization of MCs in the pig intestine. All other tested fixatives were suitable. Alcian blue and toluidine blue co-stained intestinal goblet cells which made a prima facie identification of MCs difficult. The polychromatic methylene blue proved to be the optimal staining. In order to compare MC counting results of the different fixation methods, tissue shrinkage was taken into account. As even the same fixation caused shrinkage-differences between tissue from small and large intestine, different factors for each single fixation and intestinal localization had to be calculated. Tissue shrinkage varied between 19% and 57%, the highest tissue shrinkage was found after fixation with ZSF in the large intestine, the lowest one in the small intestine after lead acetate fixation. Our study emphasizes that MC counting results from

  7. Characterization of bacterial diversity associated with calcareous deposits and drip-waters, and isolation of calcifying bacteria from two Colombian mines.

    Science.gov (United States)

    García G, Mariandrea; Márquez G, Marco Antonio; Moreno H, Claudia Ximena

    2016-01-01

    Bacterial carbonate precipitation has implications in geological processes and important biotechnological applications. Bacteria capable of precipitating carbonates have been isolated from different calcium carbonate deposits (speleothems) in caves, soil, freshwater and seawater around the world. However, the diversity of bacteria from calcareous deposits in Colombia, and their ability to precipitate carbonates, remains unknown. In this study, conventional microbiological methods and molecular tools, such as temporal temperature gradient electrophoresis (TTGE), were used to assess the composition of bacterial communities associated with carbonate deposits and drip-waters from two Colombian mines. A genetic analysis of these bacterial communities revealed a similar level of diversity, based on the number of bands detected using TTGE. The dominant phylogenetic affiliations of the bacteria, determined using 16S rRNA gene sequencing, were grouped into two phyla: Proteobacteria and Firmicutes. Within these phyla, seven genera were capable of precipitating calcium carbonates: Lysinibacillus, Bacillus, Strenotophomonas, Brevibacillus, Methylobacterium, Aeromicrobium and Acinetobacter. FTIR and SEM/EDX were used to analyze calcium carbonate crystals produced by isolated Acinetobacter gyllenbergii. The results showed that rhombohedral and angular calcite crystals with sizes of 90μm were precipitated. This research provides information regarding the presence of complex bacterial communities in secondary carbonate deposits from mines and their ability to precipitate calcium carbonate from calcareous deposits of Colombian mines. Copyright © 2015 Elsevier GmbH. All rights reserved.

  8. Influence of flooding and metal immobilising soil amendments on availability of metals for willows and earthworms in calcareous dredged sediment-derived soils

    Energy Technology Data Exchange (ETDEWEB)

    Vandecasteele, Bart, E-mail: bart.vandecasteele@ilvo.vlaanderen.b [Institute for Agricultural and Fisheries Research (ILVO), Scientific Institute of the Flemish Government, Burg. Van Gansberghelaan 109, B-9820 Merelbeke (Belgium); Du Laing, Gijs [Ghent University, Department of Applied Analytical and Physical Chemistry, Coupure 653, B-9000 Ghent (Belgium); Lettens, Suzanna [Research Institute for Nature and Forest (INBO), Scientific Institute of the Flemish Government, Gaverstraat 4, B-9500 Geraardsbergen (Belgium); Jordaens, Kurt [Department of Biology, Evolutionary Biology Group, University of Antwerp, Groenenborgerlaan 171, B-2020 Antwerp (Belgium); Tack, Filip M.G. [Ghent University, Department of Applied Analytical and Physical Chemistry, Coupure 653, B-9000 Ghent (Belgium)

    2010-06-15

    Soil amendments previously shown to be effective in reducing metal bioavailability and/or mobility in calcareous metal-polluted soils were tested on a calcareous dredged sediment-derived soil with 26 mg Cd/kg dry soil, 2200 mg Cr/kg dry soil, 220 mg Pb/kg dry soil, and 3000 mg Zn/kg dry soil. The amendments were 5% modified aluminosilicate (AS), 10% w/w lignin, 1% w/w diammonium phosphate (DAP, (NH{sub 4}){sub 2}HPO{sub 4}), 1% w/w MnO, and 5% w/w CaSO{sub 4}. In an additional treatment, the contaminated soil was submerged. Endpoints were metal uptake in Salix cinerea and Lumbricus terrestris, and effect on oxidation-reduction potential (ORP) in submerged soils. Results illustrated that the selected soil amendments were not effective in reducing ecological risk to vegetation or soil inhabiting invertebrates, as metal uptake in willows and earthworms did not significantly decrease following their application. Flooding the polluted soil resulted in metal uptake in S. cinerea comparable with concentrations for an uncontaminated soil. - Some soil amendments resulted in higher metal uptake by earthworms and willows than when the polluted soil was not amended but submersion of the polluted soil resulted in reduced Cd and Zn uptake in Salix cinerea.

  9. Weathering of a Roman Mosaic-A Biological and Quantitative Study on In Vitro Colonization of Calcareous Tesserae by Phototrophic Microorganisms.

    Directory of Open Access Journals (Sweden)

    Addolorata Marasco

    Full Text Available The potential impact of cyanobacteria and microalgae on the weathering of calcareous tesserae from a Roman mosaic of the II Century CE has been followed through in vitro experiments. Laboratory tests were carried out by inoculating mosaic tiles with single strains of Cyanobacteria or Chlorophyta to evaluate the roles of pioneer phototrophic microrganism on the resulting architecture of biofilms. The interaction between tesserae and strains was assessed at the whole substratum and micrometer scales, by image analysis and Confocal Laser Scanning (CLS microscopy, respectively. The biofilm surface coverage on each tessera varied from 19% (Fischerella ambigua to 97% (Microcoleus autumnalis. Cyanobacteria showed a better growth on calcareous tesserae, whereas the only green alga attaining a superficial coverage higher than 50% was Coelastrella rubescens. CLS microscopy evidenced two different types of spatial arrangement of the phototrophic organisms on the tesserae, that were defined as compact or porous, respectively. In the first one was measured a reduced number of empty spaces between cells or filaments, whereas in the second type, a reticulate texture allowed the presence of numerous empty volumes. The colonization processes observed are an intrinsic characteristic of each strain. We have proposed a colonization index IC as a sensible tool to describe, in a quantitative way, the pioneering attitude of each photosynthetic microorganism to colonize lithic substrates under laboratory conditions.

  10. Extreme diagenesis displayed by Pliocene-Pleistocene Calcareous Nannofossils in IODP Hole 1396A, adjacent to Montserrat Island in the Lesser Antilles

    Science.gov (United States)

    Aljahdali, M. H.; Behzad, A.; Missimer, T. M.; Wise, S. W.; Scientists, E.

    2013-12-01

    Adjacent to Montserrat Island in the Lesser Antilles of the Caribbean Sea, Integrated Ocean Drilling Program (IODP) Site 1396 recovered lower Pliocene to Pleistocene calcareous nannofossil assemblages (CN11 to CN15) that range between common to abundant and display a variety of preservations. High-resolution Scanning Electron Microscopy (SEM) observation of calcareous nannofossil assemblages in selected samples from Hole 1396A, shows severe diagenesis (overgrowth and/or dissolution) even near the top of the sequence. The nannofossil assemblages in this relatively shallow basin (e.g., 800 m) reveal abnormal diagenesis for such young specimens that are quite similar to the heavy overgrowths and dissolution generally seen only in older deposits (e.g., Cretaceous). Our hypothesis is that volcanic activity in the region probably induced this extreme diagenesis. A more detailed examination of these samples should provide a better understanding of the progression of carbonate diagenesis in this basin. The nannofossil biostratigraphy and magnetostratigraphy at Site 1396 also suggest lower sedimentation rates in the Pleistocene than in the Pliocene. A comparison site (ODP Leg 165 Site 1000) in the Caribbean Sea also shows a similar sedimentation-rate pattern. This we interpret as a regional event caused by the closure of the Central American Seaway.

  11. An optimized staining technique for the detection of Gram positive and Gram negative bacteria within tissue.

    Science.gov (United States)

    Becerra, Sandra C; Roy, Daniel C; Sanchez, Carlos J; Christy, Robert J; Burmeister, David M

    2016-04-12

    Bacterial infections are a common clinical problem in both acute and chronic wounds. With growing concerns over antibiotic resistance, treatment of bacterial infections should only occur after positive diagnosis. Currently, diagnosis is delayed due to lengthy culturing methods which may also fail to identify the presence of bacteria. While newer costly bacterial identification methods are being explored, a simple and inexpensive diagnostic tool would aid in immediate and accurate treatments for bacterial infections. Histologically, hematoxylin and eosin (H&E) and Gram stains have been employed, but are far from optimal when analyzing tissue samples due to non-specific staining. The goal of the current study was to develop a modification of the Gram stain that enhances the contrast between bacteria and host tissue. A modified Gram stain was developed and tested as an alternative to Gram stain that improves the contrast between Gram positive bacteria, Gram negative bacteria and host tissue. Initially, clinically relevant strains of Pseudomonas aeruginosa and Staphylococcus aureus were visualized in vitro and in biopsies of infected, porcine burns using routine Gram stain, and immunohistochemistry techniques involving bacterial strain-specific fluorescent antibodies as validation tools. H&E and Gram stain of serial biopsy sections were then compared to a modification of the Gram stain incorporating a counterstain that highlights collagen found in tissue. The modified Gram stain clearly identified both Gram positive and Gram negative bacteria, and when compared to H&E or Gram stain alone provided excellent contrast between bacteria and non-viable burn eschar. Moreover, when applied to surgical biopsies from patients that underwent burn debridement this technique was able to clearly detect bacterial morphology within host tissue. We describe a modification of the Gram stain that provides improved contrast of Gram positive and Gram negative microorganisms within host

  12. Living with endometriosis

    Science.gov (United States)

    Pelvic pain - living with endometriosis; Endometrial implant - living with endometriosis; Endometrioma - living with endometriosis ... counter pain relievers can reduce the pain of endometriosis. These include: Ibuprofen (Advil) Naproxen (Aleve) Acetaminophen (Tylenol) ...

  13. Improving Gram stain proficiency in hospital and satellite laboratories that do not have microbiology.

    Science.gov (United States)

    Guarner, Jeannette; Street, Cassandra; Matlock, Margaret; Cole, Lisa; Brierre, Francoise

    2017-03-01

    Consolidation of laboratories has left many hospitals and satellite laboratories with minimal microbiologic testing. In many hospitals and satellite laboratories, Gram stains on primary specimens are still performed despite difficultly in maintaining proficiency. To maintain Gram stain proficiency at a community 450-bed hospital with an active emergency room we designed bimonthly challenges that require reporting Gram staining and morphology of different organisms. The challenges consist of five specimens prepared by the reference microbiology laboratory from cultures and primary specimens. Twenty to 23 medical laboratory scientists participate reading the challenges. Results from the challenges are discussed with each medical laboratory scientists. In addition, printed images from the challenges are presented at huddle to add microbiology knowledge. On the first three challenges, Gram staining was read correctly in 71%-77% of the time while morphology 53%-66%. In the last six challenges correct answers for Gram stain were 77%-99% while morphology 73%-96%. We observed statistically significant improvement when reading Gram stains by providing frequent challenges to medical laboratory scientists. The clinical importance of Gram stain results is emphasized during huddle presentations increasing knowledge and motivation to perform the test for patients.

  14. Automated robust registration of grossly misregistered whole-slide images with varying stains

    Science.gov (United States)

    Litjens, G.; Safferling, K.; Grabe, N.

    2016-03-01

    Cancer diagnosis and pharmaceutical research increasingly depend on the accurate quantification of cancer biomarkers. Identification of biomarkers is usually performed through immunohistochemical staining of cancer sections on glass slides. However, combination of multiple biomarkers from a wide variety of immunohistochemically stained slides is a tedious process in traditional histopathology due to the switching of glass slides and re-identification of regions of interest by pathologists. Digital pathology now allows us to apply image registration algorithms to digitized whole-slides to align the differing immunohistochemical stains automatically. However, registration algorithms need to be robust to changes in color due to differing stains and severe changes in tissue content between slides. In this work we developed a robust registration methodology to allow for fast coarse alignment of multiple immunohistochemical stains to the base hematyoxylin and eosin stained image. We applied HSD color model conversion to obtain a less stain color dependent representation of the whole-slide images. Subsequently, optical density thresholding and connected component analysis were used to identify the relevant regions for registration. Template matching using normalized mutual information was applied to provide initial translation and rotation parameters, after which a cost function-driven affine registration was performed. The algorithm was validated using 40 slides from 10 prostate cancer patients, with landmark registration error as a metric. Median landmark registration error was around 180 microns, which indicates performance is adequate for practical application. None of the registrations failed, indicating the robustness of the algorithm.

  15. Helicobacter pylori detection in chronic gastritis: a comparison of staining methods

    International Nuclear Information System (INIS)

    Ahmad, F.; Khan, I.

    2011-01-01

    Background: Helicobacter pylori is an important cause of chronic gastritis, gastric ulceration and gastric malignancies as gastric carcinoma and MALT lymphoma. Its definitive diagnosis is based on histopathology. Routine H and E stain is not very effective in its detection, immune-stains and fluorescent stains are costly. Need for simple cheap and sensitive stain has always been a topic of hot debate and extensive research. Method: paraffin embedded blocks of all adult patients diagnosed as chronic gastritis/gastric ulceration with no accompanying gastric pathology as hypertrophic gastropathys, and neoplasias were taken into study. Three sections of 4 micron were cut and stained with routine H and E, Giemsa, and Cresyl fast violet. Results: Total number of patients was 50. Out of these 37 (74%) were males and 13 (26%) were females. Mean age of the patients was 50.4 years. Thirty-four percent (34%) were positive in normal H and E stain, 68% were positive in Giemsa and 76% were positive in Cresyl fast violet. Conclusion: Cresyl fast violet is a good stain for diagnosis of H. pylori gastritis. (author)

  16. A procedure for Alcian blue staining of mucins on polyvinylidene difluoride membranes.

    Science.gov (United States)

    Dong, Weijie; Matsuno, Yu-ki; Kameyama, Akihiko

    2012-10-16

    The isolation and characterization of mucins are critically important for obtaining insight into the molecular pathology of various diseases, including cancers and cystic fibrosis. Recently, we developed a novel membrane electrophoretic method, supported molecular matrix electrophoresis (SMME), which separates mucins on a polyvinylidene difluoride (PVDF) membrane impregnated with a hydrophilic polymer. Alcian blue staining is widely used to visualize mucopolysaccharides and acidic mucins on both blotted membranes and SMME membranes; however, this method cannot be used to stain mucins with a low acidic glycan content. Meanwhile, periodic acid-Schiff staining can selectively visualize glycoproteins, including mucins, but is incompatible with glycan analysis, which is indispensable for mucin characterizations. Here we describe a novel staining method, designated succinylation-Alcian blue staining, for visualizing mucins on a PVDF membrane. This method can visualize mucins regardless of the acidic residue content and shows a sensitivity 2-fold higher than that of Pro-Q Emerald 488, a fluorescent periodate Schiff-base stain. Furthermore, we demonstrate the compatibility of this novel staining procedure with glycan analysis using porcine gastric mucin as a model mucin.

  17. Stain removal and whitening by baking soda dentifrice: A review of literature.

    Science.gov (United States)

    Li, Yiming

    2017-11-01

    Tooth discoloration may be caused by intrinsic or extrinsic stains or a combination of both. There are 2 major approaches to removing the stains, including the chemical mechanism using peroxides for tooth bleaching and the mechanical mechanism using abrasives in prophylactic pastes and dentifrices to remove stains, resulting in a whitening effect. Attempts have also been made to add a low concentration of peroxides to dentifrices to enhance their abrasive cleaning to remove tooth stains. This article provides a review of both in vitro and clinical studies on stain removal and whitening effect of dentifrices containing sodium bicarbonate (baking soda). In recent years, whitening dentifrices have become popular because of little additional effort for use, ease of availability, low cost, and accumulated evidence of clinical efficacy and safety in the literature. Advances in research and technology have led to innovative formulations of dentifrices using baking soda as the sole abrasive or a component of an abrasive system. Baking soda is biologically compatible with acid-buffering capacities, antibacterial at high concentrations, and has a relatively lower abrasivity. The evidence available in the literature indicates that baking soda-based dentifrices are effective and safe for tooth stain removal and consequently whitening. A number of clinical studies have also shown that baking soda-based dentifrices are more effective in stain removal and whitening than some non-baking soda-containing dentifrices with a higher abrasivity. So far, research efforts have mainly focused on stain removal and tooth-whitening efficacy and clinical safety of baking soda dentifrices used with manual toothbrushes, with only a few studies investigating their effects using powered toothbrushes, for which further research is encouraged. As part of a daily oral hygiene practice, baking soda-based dentifrice is a desirable, alternative or additional measure for tooth stain removal and whitening

  18. Lack of clinical utility of urine gram stain for suspected urinary tract infection in pediatric patients.

    Science.gov (United States)

    Cantey, Joseph B; Gaviria-Agudelo, Claudia; McElvania TeKippe, Erin; Doern, Christopher D

    2015-04-01

    Urinary tract infection (UTI) is one of the most common infections in children. Urine culture remains the gold standard for diagnosis, but the utility of urine Gram stain relative to urinalysis (UA) is unclear. We reviewed 312 pediatric patients with suspected UTI who had urine culture, UA, and urine Gram stain performed from a single urine specimen. UA was considered positive if ≥10 leukocytes per oil immersion field were seen or if either nitrates or leukocyte esterase testing was positive. Urine Gram stain was considered positive if any organisms were seen. Sensitivity, specificity, and positive and negative predictive values were calculated using urine culture as the gold standard. Thirty-seven (12%) patients had a culture-proven UTI. Compared to urine Gram stain, UA had equal sensitivity (97.3% versus 97.5%) and higher specificity (85% versus 74%). Empirical therapy was prescribed before the Gram stain result was known in 40 (49%) patients and after in 42 (51%) patients. The antibiotics chosen did not differ between the two groups (P=0.81), nor did they differ for patients with Gram-negative rods on urine Gram stain compared to those with Gram-positive cocci (P=0.67). From these data, we conclude that UA has excellent negative predictive value that is not enhanced by urine Gram stain and that antibiotic selection did not vary based on the urine Gram stain result. In conclusion, the clinical utility of urine Gram stain does not warrant the time or cost it requires. Copyright © 2015, American Society for Microbiology. All Rights Reserved.

  19. Gram staining of protected pulmonary specimens in the early diagnosis of ventilator-associated pneumonia.

    Science.gov (United States)

    Mimoz, O; Karim, A; Mazoit, J X; Edouard, A; Leprince, S; Nordmann, P

    2000-11-01

    We evaluated prospectively the use of Gram staining of protected pulmonary specimens to allow the early diagnosis of ventilator-associated pneumonia (VAP), compared with the use of 60 bronchoscopic protected specimen brushes (PSB) and 126 blinded plugged telescopic catheters (PTC) obtained from 134 patients. Gram stains were from Cytospin slides; they were studied for the presence of microorganisms in 10 and 50 fields by two independent observers and classified according to their Gram stain morphology. Quantitative cultures were performed after serial dilution and plating on appropriate culture medium. A final diagnosis of VAP, based on a culture of > or = 10(3) c.f.u. ml-1, was established after 81 (44%) samplings. When 10 fields were analysed, a strong relationship was found between the presence of bacteria on Gram staining and the final diagnosis of VAP (for PSB and PTC respectively: sensitivity 74 and 81%, specificity 94 and 100%, positive predictive value 91 and 100%, negative predictive value 82 and 88%). The correlation was less when we compared the morphology of microorganisms observed on Gram staining with those of bacteria obtained from quantitative cultures (for PSB and PTC respectively: sensitivity 54 and 69%, specificity 86 and 89%, positive predictive value 72 and 78%, negative predictive value 74 and 84%). Increasing the number of fields read to 50 was associated with a slight decrease in specificity and positive predictive value of Gram staining, but with a small increase in its sensitivity and negative predictive value. The results obtained by the two observers were similar to each other for both numbers of fields analysed. Gram staining of protected pulmonary specimens performed on 10 fields predicted the presence of VAP and partially identified (using Gram stain morphology) the microorganisms growing at significant concentrations, and could help in the early choice of the treatment of VAP. Increasing the number of fields read or having the Gram

  20. The utility of the hematoxylin and eosin staining in patients with suspected Hirschsprung disease.

    Science.gov (United States)

    Setiadi, Josephine Amanda; Dwihantoro, Andi; Iskandar, Kristy; Heriyanto, Didik Setyo; Gunadi

    2017-06-19

    While immunohistochemistry (IHC) methods have been widely conducted for the diagnosis of Hirschsprung disease (HSCR) in developed countries, there are very few studies on their use in developing countries where hematoxylin and eosin (HE) staining is a key element of the diagnosis of HSCR. We aimed to determine the accuracy of HE staining in the diagnosis of HSCR using S100 IHC as the reference standard in Indonesia. All histopathology performed for the suspicion of HSCR patients from January 2013 to August 2015 in Dr. Sardjito Hospital, Yogyakarta, Indonesia, were retrospectively reviewed. Our study included 23 HSCR patients: 9 males and 14 females. The HE staining revealed 14 negative (absence of ganglion cells) cases (61%) and 9 positive (presence of ganglion cells) cases (39%). In S100 IHC, out of the 9 positive cases by HE staining, 6 (67%) were confirmed for having ganglion cells; and out of the 14 negative cases by HE staining, 12 (86%) were reported negative and 2 (14%) were positive by S100 IHC staining. The sensitivity, specificity, positive predictive value, negative predictive value, and accuracy rates of the HE staining were 80% (95% CI: 0.51-0.95), 75% (95% CI: 0.36-0.96), 85.7% (95% CI: 0.56-0.98), 66.7% (95% CI: 0.31-0.91), and 78.3% (95% CI: 0.58-0.90), respectively. Our study showed that HE staining has relatively moderate accuracy for the diagnosis of HSCR. The use of HE staining is still recommended for the diagnosis of HSCR given the limitation of resource allocation for more expensive IHC technologies in developing countries.