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Sample records for live staghorn coral

  1. Elkhorn and Staghorn Corals Critical Habitat

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — These data represent the critical habitat for elkhorn coral (Acropora palmata) and staghorn coral (A. cervicornis) as designated by 73 FR 72210, November 26, 2008,...

  2. Natural disease resistance in threatened staghorn corals.

    Directory of Open Access Journals (Sweden)

    Steven V Vollmer

    Full Text Available Disease epidemics have caused extensive damage to tropical coral reefs and to the reef-building corals themselves, yet nothing is known about the abilities of the coral host to resist disease infection. Understanding the potential for natural disease resistance in corals is critically important, especially in the Caribbean where the two ecologically dominant shallow-water corals, Acropora cervicornis and A. palmata, have suffered an unprecedented mass die-off due to White Band Disease (WBD, and are now listed as threatened under the US Threatened Species Act and as critically endangered under the IUCN Red List criteria. Here we examine the potential for natural resistance to WBD in the staghorn coral Acropora cervicornis by combining microsatellite genotype information with in situ transmission assays and field monitoring of WBD on tagged genotypes. We show that six percent of staghorn coral genotypes (3 out of 49 are resistant to WBD. This natural resistance to WBD in staghorn corals represents the first evidence of host disease resistance in scleractinian corals and demonstrates that staghorn corals have an innate ability to resist WBD infection. These resistant staghorn coral genotypes may explain why pockets of Acropora have been able to survive the WBD epidemic. Understanding disease resistance in these corals may be the critical link to restoring populations of these once dominant corals throughout their range.

  3. Facilitation in Caribbean coral reefs: high densities of staghorn coral foster greater coral condition and reef fish composition.

    Science.gov (United States)

    Huntington, Brittany E; Miller, Margaret W; Pausch, Rachel; Richter, Lee

    2017-05-01

    Recovery of the threatened staghorn coral (Acropora cervicornis) is posited to play a key role in Caribbean reef resilience. At four Caribbean locations (including one restored and three extant populations), we quantified characteristics of contemporary staghorn coral across increasing conspecific densities, and investigated a hypothesis of facilitation between staghorn coral and reef fishes. High staghorn densities in the Dry Tortugas exhibited significantly less partial mortality, higher branch growth, and supported greater fish abundances compared to lower densities within the same population. In contrast, partial mortality, branch growth, and fish community composition did not vary with staghorn density at the three other study locations where staghorn densities were lower overall. This suggests that density-dependent effects between the coral and fish community may only manifest at high staghorn densities. We then evaluated one facilitative mechanism for such density-dependence, whereby abundant fishes sheltering in dense staghorn aggregations deliver nutrients back to the coral, fueling faster coral growth, thereby creating more fish habitat. Indeed, dense staghorn aggregations within the Dry Tortugas exhibited significantly higher growth rates, tissue nitrogen, and zooxanthellae densities than sparse aggregations. Similarly, higher tissue nitrogen was induced in a macroalgae bioassay outplanted into the same dense and sparse aggregations, confirming greater bioavailability of nutrients at high staghorn densities. Our findings inform staghorn restoration efforts, suggesting that the most effective targets may be higher coral densities than previously thought. These coral-dense aggregations may reap the benefits of positive facilitation between the staghorn and fish community, favoring the growth and survivorship of this threatened species.

  4. Genetic Signature of Resistance to White Band Disease in the Caribbean Staghorn Coral Acropora cervicornis.

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    Silvia Libro

    Full Text Available Coral reefs are declining worldwide due to multiple factors including rising sea surface temperature, ocean acidification, and disease outbreaks. Over the last 30 years, White Band Disease (WBD alone has killed up to 95% of the Caribbean`s dominant shallow-water corals--the staghorn coral Acropora cervicornis and the elkhorn coral A. palmata. Both corals are now listed on the US Endangered Species Act, and while their recovery has been slow, recent transmission surveys indicate that more than 5% of staghorn corals are disease resistant. Here we compared transcriptome-wide gene expression between resistant and susceptible staghorn corals exposed to WBD using in situ transmission assays. We identified constitutive gene expression differences underlying disease resistance that are independent from the immune response associated with disease exposure. Genes involved in RNA interference-mediated gene silencing, including Argonaute were up-regulated in resistant corals, whereas heat shock proteins (HSPs were down-regulated. Up-regulation of Argonaute proteins indicates that post-transcriptional gene silencing plays a key, but previously unsuspected role in coral immunity and disease resistance. Constitutive expression of HSPs has been linked to thermal resilience in other Acropora corals, suggesting that the down-regulation of HSPs in disease resistant staghorn corals may confer a dual benefit of thermal resilience.

  5. Genetic Signature of Resistance to White Band Disease in the Caribbean Staghorn Coral Acropora cervicornis.

    Science.gov (United States)

    Libro, Silvia; Vollmer, Steven V

    2016-01-01

    Coral reefs are declining worldwide due to multiple factors including rising sea surface temperature, ocean acidification, and disease outbreaks. Over the last 30 years, White Band Disease (WBD) alone has killed up to 95% of the Caribbean`s dominant shallow-water corals--the staghorn coral Acropora cervicornis and the elkhorn coral A. palmata. Both corals are now listed on the US Endangered Species Act, and while their recovery has been slow, recent transmission surveys indicate that more than 5% of staghorn corals are disease resistant. Here we compared transcriptome-wide gene expression between resistant and susceptible staghorn corals exposed to WBD using in situ transmission assays. We identified constitutive gene expression differences underlying disease resistance that are independent from the immune response associated with disease exposure. Genes involved in RNA interference-mediated gene silencing, including Argonaute were up-regulated in resistant corals, whereas heat shock proteins (HSPs) were down-regulated. Up-regulation of Argonaute proteins indicates that post-transcriptional gene silencing plays a key, but previously unsuspected role in coral immunity and disease resistance. Constitutive expression of HSPs has been linked to thermal resilience in other Acropora corals, suggesting that the down-regulation of HSPs in disease resistant staghorn corals may confer a dual benefit of thermal resilience.

  6. Plasticity in skeletal characteristics of nursery-raised staghorn coral, Acropora cervicornis

    Science.gov (United States)

    Kuffner, Ilsa B.; Bartels, Erich; Stathakopoulos, Anastasios; Enochs, Ian C.; Kolodziej, G.; Toth, Lauren T.; Manzello, Derek P.

    2017-09-01

    Staghorn coral, Acropora cervicornis, is a threatened species and the primary focus of western Atlantic reef restoration efforts to date. We compared linear extension, calcification rate, and skeletal density of nursery-raised A. cervicornis branches reared for 6 months either on blocks attached to substratum or hanging from PVC trees in the water column. We demonstrate that branches grown on the substratum had significantly higher skeletal density, measured using computerized tomography, and lower linear extension rates compared to water-column fragments. Calcification rates determined with buoyant weighing were not statistically different between the two grow-out methods, but did vary among coral genotypes. Whereas skeletal density and extension rates were plastic traits that depended on grow-out method, calcification rate was conserved. Our results show that the two rearing methods generate the same amount of calcium carbonate skeleton but produce colonies with different skeletal characteristics and suggest that there is genetically based variability in coral calcification performance.

  7. Plasticity in skeletal characteristics of nursery-raised staghorn coral, Acropora cervicornis

    Science.gov (United States)

    Kuffner, Ilsa B.; Bartels, Erich; Stathakopoulos, Anastasios; Enochs, Ian C.; Kolodziej, Graham; Toth, Lauren; Manzello, Derek P.

    2017-01-01

    Staghorn coral, Acropora cervicornis, is a threatened species and the primary focus of western Atlantic reef restoration efforts to date. We compared linear extension, calcification rate, and skeletal density of nursery-raised A. cervicornis branches reared for 6 months either on blocks attached to substratum or hanging from PVC trees in the water column. We demonstrate that branches grown on the substratum had significantly higher skeletal density, measured using computerized tomography, and lower linear extension rates compared to water-column fragments. Calcification rates determined with buoyant weighing were not statistically different between the two grow-out methods, but did vary among coral genotypes. Whereas skeletal density and extension rates were plastic traits that depended on grow-out method, calcification rate was conserved. Our results show that the two rearing methods generate the same amount of calcium carbonate skeleton but produce colonies with different skeletal characteristics and suggest that there is genetically based variability in coral calcification performance.

  8. Genetic diversity and connectivity in the threatened staghorn coral (Acropora cervicornis in Florida.

    Directory of Open Access Journals (Sweden)

    Elizabeth M Hemond

    2010-01-01

    Full Text Available Over the past three decades, populations of the dominant shallow water Caribbean corals, Acropora cervicornis and A. palmata, have been devastated by white-band disease (WBD, resulting in the listing of both species as threatened under the U.S. Endangered Species Act. A key to conserving these threatened corals is understanding how their populations are genetically interconnected throughout the greater Caribbean. Genetic research has demonstrated that gene flow is regionally restricted across the Caribbean in both species. Yet, despite being an important site of coral reef research, little genetic data has been available for the Florida Acropora, especially for the staghorn coral, A. cervicornis. In this study, we present new mitochondrial DNA sequence data from 52 A. cervicornis individuals from 22 sites spread across the upper and lower Florida Keys, which suggest that Florida's A. cervicornis populations are highly genetically interconnected (F(ST = -0.081. Comparison between Florida and existing mtDNA data from six regional Caribbean populations indicates that Florida possesses high levels of standing genetic diversity (h = 0.824 relative to the rest of the greater Caribbean (h = 0.701+/-0.043. We find that the contemporary level of gene flow across the greater Caribbean, including Florida, is restricted (Phi(CT = 0.117, but evidence from shared haplotypes suggests the Western Caribbean has historically been a source of genetic variation for Florida. Despite the current patchiness of A. cervicornis in Florida, the relatively high genetic diversity and connectivity within Florida suggest that this population may have sufficient genetic variation to be viable and resilient to environmental perturbation and disease. Limited genetic exchange across regional populations of the greater Caribbean, including Florida, indicates that conservation efforts for A. cervicornis should focus on maintaining and managing populations locally rather than

  9. Genetic diversity and connectivity in the threatened staghorn coral (Acropora cervicornis) in Florida.

    Science.gov (United States)

    Hemond, Elizabeth M; Vollmer, Steven V

    2010-01-11

    Over the past three decades, populations of the dominant shallow water Caribbean corals, Acropora cervicornis and A. palmata, have been devastated by white-band disease (WBD), resulting in the listing of both species as threatened under the U.S. Endangered Species Act. A key to conserving these threatened corals is understanding how their populations are genetically interconnected throughout the greater Caribbean. Genetic research has demonstrated that gene flow is regionally restricted across the Caribbean in both species. Yet, despite being an important site of coral reef research, little genetic data has been available for the Florida Acropora, especially for the staghorn coral, A. cervicornis. In this study, we present new mitochondrial DNA sequence data from 52 A. cervicornis individuals from 22 sites spread across the upper and lower Florida Keys, which suggest that Florida's A. cervicornis populations are highly genetically interconnected (F(ST) = -0.081). Comparison between Florida and existing mtDNA data from six regional Caribbean populations indicates that Florida possesses high levels of standing genetic diversity (h = 0.824) relative to the rest of the greater Caribbean (h = 0.701+/-0.043). We find that the contemporary level of gene flow across the greater Caribbean, including Florida, is restricted (Phi(CT) = 0.117), but evidence from shared haplotypes suggests the Western Caribbean has historically been a source of genetic variation for Florida. Despite the current patchiness of A. cervicornis in Florida, the relatively high genetic diversity and connectivity within Florida suggest that this population may have sufficient genetic variation to be viable and resilient to environmental perturbation and disease. Limited genetic exchange across regional populations of the greater Caribbean, including Florida, indicates that conservation efforts for A. cervicornis should focus on maintaining and managing populations locally rather than relying on larval

  10. Disease dynamics and potential mitigation among restored and wild staghorn coral, Acropora cervicornis

    Science.gov (United States)

    Lohr, Kathryn E.; Cameron, Caitlin M.; Williams, Dana E.; Peters, Esther C.

    2014-01-01

    The threatened status (both ecologically and legally) of Caribbean staghorn coral, Acropora cervicornis, has prompted rapidly expanding efforts in culture and restocking, although tissue loss diseases continue to affect populations. In this study, disease surveillance and histopathological characterization were used to compare disease dynamics and conditions in both restored and extant wild populations. Disease had devastating effects on both wild and restored populations, but dynamics were highly variable and appeared to be site-specific with no significant differences in disease prevalence between wild versus restored sites. A subset of 20 haphazardly selected colonies at each site observed over a four-month period revealed widely varying disease incidence, although not between restored and wild sites, and a case fatality rate of 8%. A tropical storm was the only discernable environmental trigger associated with a consistent spike in incidence across all sites. Lastly, two field mitigation techniques, (1) excision of apparently healthy branch tips from a diseased colony, and (2) placement of a band of epoxy fully enclosing the diseased margin, gave equivocal results with no significant benefit detected for either treatment compared to controls. Tissue condition of associated samples was fair to very poor; unsuccessful mitigation treatment samples had severe degeneration of mesenterial filament cnidoglandular bands. Polyp mucocytes in all samples were infected with suspect rickettsia-like organisms; however, no bacterial aggregates were found. No histological differences were found between disease lesions with gross signs fitting literature descriptions of white-band disease (WBD) and rapid tissue loss (RTL). Overall, our results do not support differing disease quality, quantity, dynamics, nor health management strategies between restored and wild colonies of A. cervicornis in the Florida Keys. PMID:25210660

  11. Growth dynamics of the threatened Caribbean staghorn coral Acropora cervicornis: influence of host genotype, symbiont identity, colony size, and environmental setting.

    Science.gov (United States)

    Lirman, Diego; Schopmeyer, Stephanie; Galvan, Victor; Drury, Crawford; Baker, Andrew C; Baums, Iliana B

    2014-01-01

    The drastic decline in the abundance of Caribbean acroporid corals (Acropora cervicornis, A. palmata) has prompted the listing of this genus as threatened as well as the development of a regional propagation and restoration program. Using in situ underwater nurseries, we documented the influence of coral genotype and symbiont identity, colony size, and propagation method on the growth and branching patterns of staghorn corals in Florida and the Dominican Republic. Individual tracking of> 1700 nursery-grown staghorn fragments and colonies from 37 distinct genotypes (identified using microsatellites) in Florida and the Dominican Republic revealed a significant positive relationship between size and growth, but a decreasing rate of productivity with increasing size. Pruning vigor (enhanced growth after fragmentation) was documented even in colonies that lost 95% of their coral tissue/skeleton, indicating that high productivity can be maintained within nurseries by sequentially fragmenting corals. A significant effect of coral genotype was documented for corals grown in a common-garden setting, with fast-growing genotypes growing up to an order of magnitude faster than slow-growing genotypes. Algal-symbiont identity established using qPCR techniques showed that clade A (likely Symbiodinium A3) was the dominant symbiont type for all coral genotypes, except for one coral genotype in the DR and two in Florida that were dominated by clade C, with A- and C-dominated genotypes having similar growth rates. The threatened Caribbean staghorn coral is capable of extremely fast growth, with annual productivity rates exceeding 5 cm of new coral produced for every cm of existing coral. This species benefits from high fragment survivorship coupled by the pruning vigor experienced by the parent colonies after fragmentation. These life-history characteristics make A. cervicornis a successful candidate nursery species and provide optimism for the potential role that active propagation

  12. Growth dynamics of the threatened Caribbean staghorn coral Acropora cervicornis: influence of host genotype, symbiont identity, colony size, and environmental setting.

    Directory of Open Access Journals (Sweden)

    Diego Lirman

    Full Text Available BACKGROUND: The drastic decline in the abundance of Caribbean acroporid corals (Acropora cervicornis, A. palmata has prompted the listing of this genus as threatened as well as the development of a regional propagation and restoration program. Using in situ underwater nurseries, we documented the influence of coral genotype and symbiont identity, colony size, and propagation method on the growth and branching patterns of staghorn corals in Florida and the Dominican Republic. METHODOLOGY/PRINCIPAL FINDINGS: Individual tracking of> 1700 nursery-grown staghorn fragments and colonies from 37 distinct genotypes (identified using microsatellites in Florida and the Dominican Republic revealed a significant positive relationship between size and growth, but a decreasing rate of productivity with increasing size. Pruning vigor (enhanced growth after fragmentation was documented even in colonies that lost 95% of their coral tissue/skeleton, indicating that high productivity can be maintained within nurseries by sequentially fragmenting corals. A significant effect of coral genotype was documented for corals grown in a common-garden setting, with fast-growing genotypes growing up to an order of magnitude faster than slow-growing genotypes. Algal-symbiont identity established using qPCR techniques showed that clade A (likely Symbiodinium A3 was the dominant symbiont type for all coral genotypes, except for one coral genotype in the DR and two in Florida that were dominated by clade C, with A- and C-dominated genotypes having similar growth rates. CONCLUSION/SIGNIFICANCE: The threatened Caribbean staghorn coral is capable of extremely fast growth, with annual productivity rates exceeding 5 cm of new coral produced for every cm of existing coral. This species benefits from high fragment survivorship coupled by the pruning vigor experienced by the parent colonies after fragmentation. These life-history characteristics make A. cervicornis a successful candidate

  13. Calcification in the staghorn coral Acropora acuminata: variations in apparent skeletal incorporation of radioisotopes due to different methods of processing

    International Nuclear Information System (INIS)

    Crossland, C.J.; Barnes, D.J.

    1977-01-01

    Pieces of branch from the staghorn coral Acropora acuminata were incubated with 45 CaCl 2 and NaH 14 CO 3 under identical conditions in the light or in the dark. Specimens were then processed in different ways. All specimens were placed in N KOH to digest tissues. Some were placed in KOH immediately after incubation; others were placed in KOH after 2 h washing, or after 2 h extraction with methanol-chloroform-water. Specimens were washed in running fresh water or running seawater; some were killed in liquid N 2 before washing. Radioactivity associated with skeleton and tissues was determined. The method of processing profoundly affected the results. In dark incubations, there was up to a four-fold difference in apparent skeletal incorporation of 45 Ca ++ between average values obtained for the different treatments. For 14 C incorporation, there was a difference of up to 2.5 times. In light incubations, skeletal incorporation of both radioisotopes showed a two-fold difference between high and low average values obtained for the different treatments. (orig.) [de

  14. The skeleton of the staghorn coral Acropora millepora: molecular and structural characterization

    NARCIS (Netherlands)

    Ramos-Silva, P.; Kaandorp, J.; Herbst, F.; Plasseraud, L.; Alcaraz, G.; Stern, C.; Corneillat, M.; Guichard, N.; Durlet, C.; Luquet, G.; Marin, F.

    2014-01-01

    The scleractinian coral Acropora millepora is one of the most studied species from the Great Barrier Reef. This species has been used to understand evolutionary, immune and developmental processes in cnidarians. It has also been subject of several ecological studies in order to elucidate reef

  15. The skeleton of the staghorn coral Acropora millepora: molecular and structural characterization.

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    Paula Ramos-Silva

    Full Text Available The scleractinian coral Acropora millepora is one of the most studied species from the Great Barrier Reef. This species has been used to understand evolutionary, immune and developmental processes in cnidarians. It has also been subject of several ecological studies in order to elucidate reef responses to environmental changes such as temperature rise and ocean acidification (OA. In these contexts, several nucleic acid resources were made available. When combined to a recent proteomic analysis of the coral skeletal organic matrix (SOM, they enabled the identification of several skeletal matrix proteins, making A. millepora into an emerging model for biomineralization studies. Here we describe the skeletal microstructure of A. millepora skeleton, together with a functional and biochemical characterization of its occluded SOM that focuses on the protein and saccharidic moieties. The skeletal matrix proteins show a large range of isoelectric points, compositional patterns and signatures. Besides secreted proteins, there are a significant number of proteins with membrane attachment sites such as transmembrane domains and GPI anchors as well as proteins with integrin binding sites. These features show that the skeletal proteins must have strong adhesion properties in order to function in the calcifying space. Moreover this data suggest a molecular connection between the calcifying epithelium and the skeletal tissue during biocalcification. In terms of sugar moieties, the enrichment of the SOM in arabinose is striking, and the monosaccharide composition exhibits the same signature as that of mucus of acroporid corals. Finally, we observe that the interaction of the acetic acid soluble SOM on the morphology of in vitro grown CaCO3 crystals is very pronounced when compared with the calcifying matrices of some mollusks. In light of these results, we wish to commend Acropora millepora as a model for biocalcification studies in scleractinians, from

  16. Prevalence of virus-like particles within a staghorn scleractinian coral ( Acropora muricata) from the Great Barrier Reef

    Science.gov (United States)

    Patten, N. L.; Harrison, P. L.; Mitchell, J. G.

    2008-09-01

    Transmission electron microscopy (TEM) was used to determine whether Acropora muricata coral colonies from the Great Barrier Reef (GBR), Australia, harboured virus-like particles (VLPs). VLPs were present in all coral colonies sampled at Heron Island (southern GBR) and in tagged coral colonies sampled in at least two of the three sampling periods at Lizard Island (northern GBR). VLPs were observed within gastrodermal and epidermal tissues, and on rarer occasions, within the mesoglea. These VLPs had similar morphologies to known prokaryotic and eukaryotic viruses in other systems. Icosahedral VLPs were observed most frequently, however, filamentous VLPs (FVLPs) and phage were also noted. There were no clear differences in VLP size, morphology or location within the tissues with respect to sample date, coral health status or site. The most common VLP morphotype exhibited icosahedral symmetry, 120-150 nm in diameter, with an electron-dense core and an electronlucent membrane. Larger VLPs of similar morphology were also common. VLPs occurred as single entities, in groups, or in dense clusters, either as free particles within coral tissues, or within membrane-bound vacuoles. VLPs were commonly observed within the perinuclear region, with mitochondria, golgi apparatus and crescent-shaped particles frequently observed within close proximity. The host(s) of these observed VLPs was not clear; however, the different sizes and morphologies of VLPs observed within A. muricata tissues suggest that viruses are infecting either the coral animal, zooxanthellae, intracellular bacteria and/or other coral-associated microbiota, or that the one host is susceptible to infection from more than one type of virus. These results add to the limited but emerging body of evidence that viruses represent another potentially important component of the coral holobiont.

  17. 78 FR 12702 - Endangered and Threatened Species; Proposed Rule To List 66 Reef-Building Coral Species; Proposed...

    Science.gov (United States)

    2013-02-25

    ...; Proposed Reclassification of Elkhorn Acropora palmata and Staghorn Acropora cervicornis Under the... reclassifications of elkhorn (Acropora palmata) and staghorn (Acropora cervicornis) corals under the ESA until April...

  18. Spectral response of the coral rubble, living corals, and dead corals: study case on the Spermonde Archipelago, Indonesia

    Science.gov (United States)

    Nurdin, Nurjannah; Komatsu, Teruhisa; Yamano, Hiroya; Arafat, Gulam; Rani, Chair; Akbar AS, M.

    2012-10-01

    Coral reefs play important ecological services such as providing foods, biodiversity, nutrient recycling etc. for human society. On the other hand, they are threatened by human impacts such as illegal fishing and environmental changes such as rises of sea water temperature and sea level due to global warming. Thus, it is very important to monitor dynamic spatial distributions of coral reefs and related habitats such as coral rubble, dead coral, bleached corals, seagrass, etc. Hyperspectral data, in particular, offer high potential for characterizing and mapping coral reefs because of their capability to identify individual reef components based on their detailed spectral response. We studied the optical properties by measuring in situ spectra of living corals, dead coral and coral rubble covered with algae. Study site was selected in Spermonde archipelago, South Sulawesi, Indonesia because this area is included in the highest diversity of corals in the world named as Coral Triangle, which is recognized as the global centre of marine biodiversity and a global priority for conservation. Correlation analysis and cluster analysis support that there are distinct differences in reflectance spectra among categories. Common spectral characteristic of living corals, dead corals and coral rubble covered with algae was a reflectance minimum at 674 nm. Healthy corals, dead coral covered with algae and coral rubble covered with algae showed high similarity of spectral reflectance. It is estimated that this is due to photsynthetic pigments.

  19. Anthropogenic mortality on coral reefs in Caribbean Panama predates coral disease and bleaching.

    Science.gov (United States)

    Cramer, Katie L; Jackson, Jeremy B C; Angioletti, Christopher V; Leonard-Pingel, Jill; Guilderson, Thomas P

    2012-06-01

    Caribbean reef corals have declined precipitously since the 1980s due to regional episodes of bleaching, disease and algal overgrowth, but the extent of earlier degradation due to localised historical disturbances such as land clearing and overfishing remains unresolved. We analysed coral and molluscan fossil assemblages from reefs near Bocas del Toro, Panama to construct a timeline of ecological change from the 19th century-present. We report large changes before 1960 in coastal lagoons coincident with extensive deforestation, and after 1960 on offshore reefs. Striking changes include the demise of previously dominant staghorn coral Acropora cervicornis and oyster Dendrostrea frons that lives attached to gorgonians and staghorn corals. Reductions in bivalve size and simplification of gastropod trophic structure further implicate increasing environmental stress on reefs. Our paleoecological data strongly support the hypothesis, from extensive qualitative data, that Caribbean reef degradation predates coral bleaching and disease outbreaks linked to anthropogenic climate change. © 2012 Blackwell Publishing Ltd/CNRS.

  20. Spectral classifying base on color of live corals and dead corals covered with algae

    Science.gov (United States)

    Nurdin, Nurjannah; Komatsu, Teruhisa; Barille, Laurent; Akbar, A. S. M.; Sawayama, Shuhei; Fitrah, Muh. Nur; Prasyad, Hermansyah

    2016-05-01

    Pigments in the host tissues of corals can make a significant contribution to their spectral signature and can affect their apparent color as perceived by a human observer. The aim of this study is classifying the spectral reflectance of corals base on different color. It is expected that they can be used as references in discriminating between live corals, dead coral covered with algae Spectral reflectance data was collected in three small islands, Spermonde Archipelago, Indonesia by using a hyperspectral radiometer underwater. First and second derivative analysis resolved the wavelength locations of dominant features contributing to reflectance in corals and support the distinct differences in spectra among colour existed. Spectral derivative analysis was used to determine the specific wavelength regions ideal for remote identification of substrate type. The analysis results shown that yellow, green, brown and violet live corals are spectrally separable from each other, but they are similar with dead coral covered with algae spectral.

  1. Loss of live coral compromises predator-avoidance behaviour in coral reef damselfish.

    Science.gov (United States)

    Boström-Einarsson, Lisa; Bonin, Mary C; Munday, Philip L; Jones, Geoffrey P

    2018-05-17

    Tropical reefs have experienced an unprecedented loss of live coral in the past few decades and the biodiversity of coral-dependent species is under threat. Many reef fish species decline in abundance as coral cover is lost, yet the mechanisms responsible for these losses are largely unknown. A commonly hypothesised cause of fish decline is the loss of shelter space between branches as dead corals become overgrown by algae. Here we tested this hypothesis by quantifying changes in predator-avoidance behaviour of a common damselfish, Pomacentrus moluccensis, before and after the death of their coral colony. Groups of P. moluccensis were placed on either healthy or degraded coral colonies, startled using a visual stimulus and their sheltering responses compared over a 7-week period. P. moluccensis stopped sheltering amongst the coral branches immediately following the death of the coral, despite the presence of ample shelter space. Instead, most individuals swam away from the dead coral, potentially increasing their exposure to predators. It appears that the presence of live coral rather than shelter per se is the necessary cue that elicits the appropriate behavioural response to potential predators. The disruption of this link poses an immediate threat to coral-associated fishes on degrading reefs.

  2. A coral-on-a-chip microfluidic platform enabling live-imaging microscopy of reef-building corals

    Science.gov (United States)

    Shapiro, Orr H.; Kramarsky-Winter, Esti; Gavish, Assaf R.; Stocker, Roman; Vardi, Assaf

    2016-01-01

    Coral reefs, and the unique ecosystems they support, are facing severe threats by human activities and climate change. Our understanding of these threats is hampered by the lack of robust approaches for studying the micro-scale interactions between corals and their environment. Here we present an experimental platform, coral-on-a-chip, combining micropropagation and microfluidics to allow direct microscopic study of live coral polyps. The small and transparent coral micropropagates are ideally suited for live-imaging microscopy, while the microfluidic platform facilitates long-term visualization under controlled environmental conditions. We demonstrate the usefulness of this approach by imaging coral micropropagates at previously unattainable spatio-temporal resolutions, providing new insights into several micro-scale processes including coral calcification, coral–pathogen interaction and the loss of algal symbionts (coral bleaching). Coral-on-a-chip thus provides a powerful method for studying coral physiology in vivo at the micro-scale, opening new vistas in coral biology. PMID:26940983

  3. Live Coral Cover Index Testing and Application with Hyperspectral Airborne Image Data

    Directory of Open Access Journals (Sweden)

    Karen E. Joyce

    2013-11-01

    Full Text Available Coral reefs are complex, heterogeneous environments where it is common for the features of interest to be smaller than the spatial dimensions of imaging sensors. While the coverage of live coral at any point in time is a critical environmental management issue, image pixels may represent mixed proportions of coverage. In order to address this, we describe the development, application, and testing of a spectral index for mapping live coral cover using CASI-2 airborne hyperspectral high spatial resolution imagery of Heron Reef, Australia. Field surveys were conducted in areas of varying depth to quantify live coral cover. Image statistics were extracted from co-registered imagery in the form of reflectance, derivatives, and band ratios. Each of the spectral transforms was assessed for their correlation with live coral cover, determining that the second derivative around 564 nm was the most sensitive to live coral cover variations(r2 = 0.63. Extensive field survey was used to transform relative to absolute coral cover, which was then applied to produce a live coral cover map of Heron Reef. We present the live coral cover index as a simple and viable means to estimate the amount of live coral over potentially thousands of km2 and in clear-water reefs.

  4. Habitat Selectivity and Reliance on Live Corals for Indo-Pacific Hawkfishes (Family: Cirrhitidae)

    KAUST Repository

    Coker, Darren James

    2015-11-03

    Hawkfishes (family: Cirrhitidae) are small conspicuous reef predators that commonly perch on, or shelter within, the branches of coral colonies. This study examined habitat associations of hawkfishes, and explicitly tested whether hawkfishes associate with specific types of live coral. Live coral use and habitat selectivity of hawkfishes was explored at six locations from Chagos in the central Indian Ocean extending east to Fiji in the Pacific Ocean. A total of 529 hawkfishes from seven species were recorded across all locations with 63% of individuals observed perching on, or sheltering within, live coral colonies. Five species (all except Cirrhitus pinnulatus and Cirrhitichthys oxycephalus) associated with live coral habitats. Cirrhitichthys falco selected for species of Pocillopora while Paracirrhites arcatus and P. forsteri selected for both Pocillopora and Acropora, revealing that these habitats are used disproportionately more than expected based on the local cover of these coral genera. Habitat selection was consistent across geographic locations, and species of Pocillopora were the most frequently used and most consistently selected even though this coral genus never comprised more than 6% of the total coral cover at any of the locations. Across locations, Paracirrhites arcatus and P. forsteri were the most abundant species and variation in their abundance corresponded with local patterns of live coral cover and abundance of Pocilloporid corals, respectively. These findings demonstrate the link between small predatory fishes and live coral habitats adding to the growing body of literature highlighting that live corals (especially erect branching corals) are critically important for sustaining high abundance and diversity of fishes on coral reefs.

  5. Habitat Selectivity and Reliance on Live Corals for Indo-Pacific Hawkfishes (Family: Cirrhitidae)

    KAUST Repository

    Coker, Darren James; Hoey, Andrew S.; Wilson, Shaun K.; Depczynski, Martial; Graham, Nicholas A. J.; Hobbs, Jean-Paul A.; Holmes, Thomas H.; Pratchett, Morgan S.

    2015-01-01

    Hawkfishes (family: Cirrhitidae) are small conspicuous reef predators that commonly perch on, or shelter within, the branches of coral colonies. This study examined habitat associations of hawkfishes, and explicitly tested whether hawkfishes associate with specific types of live coral. Live coral use and habitat selectivity of hawkfishes was explored at six locations from Chagos in the central Indian Ocean extending east to Fiji in the Pacific Ocean. A total of 529 hawkfishes from seven species were recorded across all locations with 63% of individuals observed perching on, or sheltering within, live coral colonies. Five species (all except Cirrhitus pinnulatus and Cirrhitichthys oxycephalus) associated with live coral habitats. Cirrhitichthys falco selected for species of Pocillopora while Paracirrhites arcatus and P. forsteri selected for both Pocillopora and Acropora, revealing that these habitats are used disproportionately more than expected based on the local cover of these coral genera. Habitat selection was consistent across geographic locations, and species of Pocillopora were the most frequently used and most consistently selected even though this coral genus never comprised more than 6% of the total coral cover at any of the locations. Across locations, Paracirrhites arcatus and P. forsteri were the most abundant species and variation in their abundance corresponded with local patterns of live coral cover and abundance of Pocilloporid corals, respectively. These findings demonstrate the link between small predatory fishes and live coral habitats adding to the growing body of literature highlighting that live corals (especially erect branching corals) are critically important for sustaining high abundance and diversity of fishes on coral reefs.

  6. Habitat Selectivity and Reliance on Live Corals for Indo-Pacific Hawkfishes (Family: Cirrhitidae.

    Directory of Open Access Journals (Sweden)

    Darren J Coker

    Full Text Available Hawkfishes (family: Cirrhitidae are small conspicuous reef predators that commonly perch on, or shelter within, the branches of coral colonies. This study examined habitat associations of hawkfishes, and explicitly tested whether hawkfishes associate with specific types of live coral. Live coral use and habitat selectivity of hawkfishes was explored at six locations from Chagos in the central Indian Ocean extending east to Fiji in the Pacific Ocean. A total of 529 hawkfishes from seven species were recorded across all locations with 63% of individuals observed perching on, or sheltering within, live coral colonies. Five species (all except Cirrhitus pinnulatus and Cirrhitichthys oxycephalus associated with live coral habitats. Cirrhitichthys falco selected for species of Pocillopora while Paracirrhites arcatus and P. forsteri selected for both Pocillopora and Acropora, revealing that these habitats are used disproportionately more than expected based on the local cover of these coral genera. Habitat selection was consistent across geographic locations, and species of Pocillopora were the most frequently used and most consistently selected even though this coral genus never comprised more than 6% of the total coral cover at any of the locations. Across locations, Paracirrhites arcatus and P. forsteri were the most abundant species and variation in their abundance corresponded with local patterns of live coral cover and abundance of Pocilloporid corals, respectively. These findings demonstrate the link between small predatory fishes and live coral habitats adding to the growing body of literature highlighting that live corals (especially erect branching corals are critically important for sustaining high abundance and diversity of fishes on coral reefs.

  7. Habitat Selectivity and Reliance on Live Corals for Indo-Pacific Hawkfishes (Family: Cirrhitidae).

    Science.gov (United States)

    Coker, Darren J; Hoey, Andrew S; Wilson, Shaun K; Depczynski, Martial; Graham, Nicholas A J; Hobbs, Jean-Paul A; Holmes, Thomas H; Pratchett, Morgan S

    2015-01-01

    Hawkfishes (family: Cirrhitidae) are small conspicuous reef predators that commonly perch on, or shelter within, the branches of coral colonies. This study examined habitat associations of hawkfishes, and explicitly tested whether hawkfishes associate with specific types of live coral. Live coral use and habitat selectivity of hawkfishes was explored at six locations from Chagos in the central Indian Ocean extending east to Fiji in the Pacific Ocean. A total of 529 hawkfishes from seven species were recorded across all locations with 63% of individuals observed perching on, or sheltering within, live coral colonies. Five species (all except Cirrhitus pinnulatus and Cirrhitichthys oxycephalus) associated with live coral habitats. Cirrhitichthys falco selected for species of Pocillopora while Paracirrhites arcatus and P. forsteri selected for both Pocillopora and Acropora, revealing that these habitats are used disproportionately more than expected based on the local cover of these coral genera. Habitat selection was consistent across geographic locations, and species of Pocillopora were the most frequently used and most consistently selected even though this coral genus never comprised more than 6% of the total coral cover at any of the locations. Across locations, Paracirrhites arcatus and P. forsteri were the most abundant species and variation in their abundance corresponded with local patterns of live coral cover and abundance of Pocilloporid corals, respectively. These findings demonstrate the link between small predatory fishes and live coral habitats adding to the growing body of literature highlighting that live corals (especially erect branching corals) are critically important for sustaining high abundance and diversity of fishes on coral reefs.

  8. Are coral reefs victims of their own past success?

    Science.gov (United States)

    Renema, Willem; Pandolfi, John M; Kiessling, Wolfgang; Bosellini, Francesca R; Klaus, James S; Korpanty, Chelsea; Rosen, Brian R; Santodomingo, Nadiezhda; Wallace, Carden C; Webster, Jody M; Johnson, Kenneth G

    2016-04-01

    As one of the most prolific and widespread reef builders, the staghorn coral Acropora holds a disproportionately large role in how coral reefs will respond to accelerating anthropogenic change. We show that although Acropora has a diverse history extended over the past 50 million years, it was not a dominant reef builder until the onset of high-amplitude glacioeustatic sea-level fluctuations 1.8 million years ago. High growth rates and propagation by fragmentation have favored staghorn corals since this time. In contrast, staghorn corals are among the most vulnerable corals to anthropogenic stressors, with marked global loss of abundance worldwide. The continued decline in staghorn coral abundance and the mounting challenges from both local stress and climate change will limit the coral reefs' ability to provide ecosystem services.

  9. Discovery of a living coral reef in the coastal waters of Iraq

    OpenAIRE

    Pohl, Thomas; Al-Muqdadi, Sameh W.; Ali, Malik H.; Fawzi, Nadia Al-Mudaffar; Ehrlich, Hermann; Merkel, Broder

    2014-01-01

    Until now, it has been well-established that coral complex in the Arabian/Persian Gulf only exist in the coastal regions of Bahrain, Iran, Kuwait, Oman, Qatar, Saudi Arabia, and United Arab Emirates and it was thought that there are no coral reefs in Iraq. However, here for the first time we show the existence of a living 28 km2 large coral reef in this country. These corals are adapted to one of the most extreme coral-bearing environments on earth: the seawater temperature in this area range...

  10. Management of complete staghorn stone in a developing country

    Directory of Open Access Journals (Sweden)

    Anant Kumar

    2002-01-01

    Renal failure patients had higher clearance rates with open procedures compared to PNL (80% vs 62.5% respec-tively. Moreover these patients had higher incidence of major bleeding with PNL compared to open procedures (31.3% vs 10%. Conclusions: Advantages of endourological procedures in the management of staghorn stones is offset by the need of ancillary treatments, which are expensive and which require frequent visits to the hospital. In view of high clear-ance rates, lesser treatment cost and lesser incidence of complications, open surgery still has a place in the man-agement of staghorn renal stones in patients who have economic constraints and live in remote areas where medi-cal facilities are not freely available. These advantages are also seen in the renal failure patients where complica-tions with endourologic procedures were significantly more than that with open surgery. However postoperative mor-bidity and larger scar should be discussed with the pa-tients.

  11. The management of staghorn calculi in children

    Science.gov (United States)

    Horuz, Rahim; Sarica, Kemal

    2012-01-01

    Objectives To review reports focusing on the surgical treatment of staghorn stones in children, as despite all the improvements in the surgical treatment of paediatric urolithiasis the management of staghorn calculi still represents a challenging problem in urology practice. Methods To evaluate current knowledge about treating staghorn calculi in children, we searched PubMed for relevant articles published between 1991 and 2011, using a combination of related keywords, i.e. staghorn stone, child, kidney calculi, surgical treatment, electrohydraulic shockwave therapy (ESWL), percutaneous nephrolithotomy (PCNL), and open surgery. Reports relating to the treatment of paediatric stone disease in general (open surgery, PCNL, ESWL) were also searched with the same method. Additional references were obtained from the reference list of full-text reports. Results Although open surgery had been widely used in the past for treating such stones in children, currently it has only limited indications in highly selected patients. Current published data clearly indicate that, in experienced hands, both PCNL and ESWL are now effective methods for treating staghorn calculi in children. Conclusions Due to advanced techniques and instrumentation, it is now possible to successfully treat staghorn calculi in children, with very limited safety concerns. Currently, while PCNL is recommended as the first-line surgical treatment, ESWL, open surgery and/or combined methods are valuable but secondary options in the treatment of paediatric staghorn calculi. PMID:26558045

  12. The potential for coral reef establishment through free-living stabilization

    KAUST Repository

    Hennige, S. J.

    2017-10-11

    Corals thrive in a variety of environments, from low wave and tidal energy lagoons, to high energy tidal reef flats, but remain dependent upon suitable substrate. Herein we reviewed the phenomenon of free-living corals (coralliths), examined whether they have the capacity to create their own stable habitat in otherwise uninhabitable, poor substrate environments through \\'free-living stabilization\\', and explore their potential ecological role on coral reefs. This stabilization could be achieved by coral settlement and survival on mobile substrate, with subsequent growth into free-living coralliths until a critical mass is reached that prevents further movement. This allows for secondary reef colonization by other coral species. To preliminarily test this hypothesis we provide evidence that the potential to support secondary coral colonisation increases with corallith size. Due to the limited diversity of corallith species observed here and in the literature, and the lack of physiological differences exhibited by coralliths here to static controls, it seems likely that only a small selection of coral species have the ability to form coralliths, and the potential to create their own stable habitat.

  13. The potential for coral reef establishment through free-living stabilization

    KAUST Repository

    Hennige, S. J.; Burdett, H. L.; Perna, Gabriela; Tudhope, A. W.; Kamenos, N. A.

    2017-01-01

    Corals thrive in a variety of environments, from low wave and tidal energy lagoons, to high energy tidal reef flats, but remain dependent upon suitable substrate. Herein we reviewed the phenomenon of free-living corals (coralliths), examined whether they have the capacity to create their own stable habitat in otherwise uninhabitable, poor substrate environments through 'free-living stabilization', and explore their potential ecological role on coral reefs. This stabilization could be achieved by coral settlement and survival on mobile substrate, with subsequent growth into free-living coralliths until a critical mass is reached that prevents further movement. This allows for secondary reef colonization by other coral species. To preliminarily test this hypothesis we provide evidence that the potential to support secondary coral colonisation increases with corallith size. Due to the limited diversity of corallith species observed here and in the literature, and the lack of physiological differences exhibited by coralliths here to static controls, it seems likely that only a small selection of coral species have the ability to form coralliths, and the potential to create their own stable habitat.

  14. Sponge erosion under acidification and warming scenarios: differential impacts on living and dead coral.

    Science.gov (United States)

    Stubler, Amber D; Furman, Bradley T; Peterson, Bradley J

    2015-11-01

    Ocean acidification will disproportionately impact the growth of calcifying organisms in coral reef ecosystems. Simultaneously, sponge bioerosion rates have been shown to increase as seawater pH decreases. We conducted a 20-week experiment that included a 4-week acclimation period with a high number of replicate tanks and a fully orthogonal design with two levels of temperature (ambient and +1 °C), three levels of pH (8.1, 7.8, and 7.6), and two levels of boring sponge (Cliona varians, present and absent) to account for differences in sponge attachment and carbonate change for both living and dead coral substrate (Porites furcata). Net coral calcification, net dissolution/bioerosion, coral and sponge survival, sponge attachment, and sponge symbiont health were evaluated. Additionally, we used the empirical data from the experiment to develop a stochastic simulation of carbonate change for small coral clusters (i.e., simulated reefs). Our findings suggest differential impacts of temperature, pH and sponge presence for living and dead corals. Net coral calcification (mg CaCO3  cm(-2)  day(-1) ) was significantly reduced in treatments with increased temperature (+1 °C) and when sponges were present; acidification had no significant effect on coral calcification. Net dissolution of dead coral was primarily driven by pH, regardless of sponge presence or seawater temperature. A reevaluation of the current paradigm of coral carbonate change under future acidification and warming scenarios should include ecologically relevant timescales, species interactions, and community organization to more accurately predict ecosystem-level response to future conditions. © 2015 John Wiley & Sons Ltd.

  15. Percutaneous management of staghorn renal calculi

    International Nuclear Information System (INIS)

    Lee, Won Jay

    1989-01-01

    During a four year period, ending May 1987, 154 cases of symptomatic staghorn calculi have been treated by percutaneous nephrolithotomy. Of these patients,86% were discharged completely stone free with the remainder having fragments less than 5 mm in greatest diameter. More than one operative procedure during the same hospitalizations was required in 24% of patients and multiple percutaneous tracts were established in excess of 73% of them. Significant complications occurred in 16% of patients and there was one death. Most complications can be generally by minimized by careful approach and manageable by interventional radiological means. The management of patients with staghorn calculi requires a comprehensive understanding of the renal anatomy, selection of appropriate percutaneous nephrostomy tract sites, and radiologic-urologic expertise needed to remove the large stone mass. The advent of extracorporeal shock wave lithotripsy will not abolish the need for nephrolithotomy, particularly complex stones such as staghorn calculi

  16. Coral restoration Bonaire : an evaluation of growth, regeneration and survival

    NARCIS (Netherlands)

    Meesters, H.W.G.; Boomstra, B.; Hurtado-Lopez, N.; Montbrun, A.; Virdis, F.

    2015-01-01

    The Coral restoration of Staghorn (Acropora cervicornis) and Elkhorn (A. palmata) as practiced by the Coral Restoration Foundation Bonaire (CRFB) is shown to be highly successful in terms of growth and survival of new colonies, in both nurseries and transplant locations. Coral restoration is

  17. Endolithic algae in living stony corals: algal concentrations under influence of depth-dependent light conditions and coral tissue fluorescence in Agaricia agaricites (L.) and Meandrina meandrites (L.) (Scleractinia, Anthozoa)

    NARCIS (Netherlands)

    Delvoye, Laurent

    1992-01-01

    DELVOYE, L., 1992. Endolithic algae in living stony corals: Algal concentrations under influence of depth-dependent light conditions and coral tissue fluorescence in Agaricia agaricites (L) and Meandrina meandrites (L.) (Sclereactinia, Anthozoa). Studies Nat. Hist. Caribbean Region 71, Amsterdam

  18. Simple radiological indicators for staghorn calculi response to ESWL.

    Science.gov (United States)

    Murshidi, M S

    2006-01-01

    To evaluate staghorn calculi response to ESWL using simple radiological indicators which are stone size, stone homogeneity, and stone density. This is a prospective study of 60 patients with staghorn calculi where the majority had ESWL. The relationship between response and size, homogeneity and density is studied. Single staghorn calculus less than 4 cm, heterogeneous with stone density similar to bone or a little denser than bone has best response to ESWL. ESWL is useful as first line therapy for staghorn calculi less than 4 cm, heterogeneous with similar density to bone or a little denser than bone.

  19. Occurrence of live corals in close vicinity of nuclear power plant, Tarapur, Maharashtra, India

    International Nuclear Information System (INIS)

    Ambekar, Ajit; Kubal, Priti; Prakash, Chandra; Sawant, Paramita B.; Pal, Asim K.; Lakra, W.S.; Baburajan, A.

    2015-01-01

    There has been world-wide concern over ecosystem health around nuclear power plants due to the release of warm water effluent into marine environment. The Tarapur atomic power station has been running for last four decades yet the live corals were encountered at intertidal area within the 8 km radius of power plant. The prima facie data recorded on coral belongs to three different species, i.e., Fevites complanata, Goniopora minor and Porites lutea. The density of corals was determined through line transect intersect method by employing a 1 m 2 quadrant at every 10 m interval. Among the different physico-chemical parameters, surface water temperature (29.5 °C to 38 °C), salinity (32% to 35.7%), pH (7.8 to 8.2), turbidity (7 to 11 NTU), total suspended solids (272 to 327 ppm) with nutrients like ammonia, nitrite, nitrate and inorganic phosphates were analysed. The sediment texture was mainly dominated by sand >silt>clay, as all the intertidal locations are of rocky habitat. The organic carbon content of sediment was in the range of 0.78% to 1.98%. During the present study, it was observed that the impact of warm water effluent is local and it got decreased with increase in distance. It was also observed that the coral colonies were affected due to conventional fishing activities beyond 3 km of nuclear power plant. (author)

  20. Live tissue imaging shows reef corals elevate pH under their calcifying tissue relative to seawater.

    Directory of Open Access Journals (Sweden)

    Alexander Venn

    Full Text Available The threat posed to coral reefs by changes in seawater pH and carbonate chemistry (ocean acidification raises the need for a better mechanistic understanding of physiological processes linked to coral calcification. Current models of coral calcification argue that corals elevate extracellular pH under their calcifying tissue relative to seawater to promote skeleton formation, but pH measurements taken from the calcifying tissue of living, intact corals have not been achieved to date. We performed live tissue imaging of the reef coral Stylophora pistillata to determine extracellular pH under the calcifying tissue and intracellular pH in calicoblastic cells. We worked with actively calcifying corals under flowing seawater and show that extracellular pH (pHe under the calicoblastic epithelium is elevated by ∼0.5 and ∼0.2 pH units relative to the surrounding seawater in light and dark conditions respectively. By contrast, the intracellular pH (pHi of the calicoblastic epithelium remains stable in the light and dark. Estimates of aragonite saturation states derived from our data indicate the elevation in subcalicoblastic pHe favour calcification and may thus be a critical step in the calcification process. However, the observed close association of the calicoblastic epithelium with the underlying crystals suggests that the calicoblastic cells influence the growth of the coral skeleton by other processes in addition to pHe modification. The procedure used in the current study provides a novel, tangible approach for future investigations into these processes and the impact of environmental change on the cellular mechanisms underpinning coral calcification.

  1. Staghorn calculi and xanthogranulomatous pyelonephritis associated with transitional cell carcinoma

    Directory of Open Access Journals (Sweden)

    Chao-Wei Tseng

    2015-03-01

    Full Text Available Untreated staghorn calculi can cause xanthogranulomatous pyelonephritis (XGP, diminished renal function, and renal malignancy. Squamous cell carcinoma (SCC of the upper urinary tract is associated with kidney stones and chronic infection, but their association with transitional cell carcinoma (TCC has not been proven and has rarely been reported in literature. We present a rare case of staghorn calculi and XGP associated with TCC.

  2. The threatened Atlantic elkhorn coral, Acropora palmata : population dynamics and their policy implications

    OpenAIRE

    Vardi, Tali

    2011-01-01

    Fossil data from multiple locations indicates that Atlantic elkhorn coral, Acropora palmata, formed shallow reefs throughout the Caribbean Sea since the Pleistocene. Beginning in the 1980s A. palmata has declined to a small fraction of its formerly vast extent throughout the region. In 2006, elkhorn coral was the first coral, along with its sister species, staghorn coral (Acropora cervicornis), to be included on the U.S. Endangered Species List. We used size-based matrix mod...

  3. Estimating Sustainable Live-Coral Harvest at Kamiali Wildlife Management Area, Papua New Guinea.

    Science.gov (United States)

    Longenecker, Ken; Bolick, Holly; Langston, Ross

    2015-01-01

    Live coral is harvested throughout the Indo-West Pacific to make lime, used in the consumption of the world's fourth-most consumed drug, betel nut. Coral harvesting is an environmental concern; however, because lime-making is one of the few sources of income in some areas of Papua New Guinea (PNG), the practice is unlikely to stop. To better manage coral harvest, we used standard fishery-yield methods to generate sustainable-harvest guidelines for corymbose Acropora species found on the reef flat and crest at Lababia, PNG. We constructed a yield curve (weight-specific net annual-dry-weight production) by: 1) describing the allometric relationship between colony size and dry weight, and using that relationship to estimate the dry weight of Acropora colonies in situ; 2) estimating annual growth of Acropora colonies by estimating in situ, and describing the relationship between, colony dry weight at the beginning and end of one year; and 3) conducting belt-transect surveys to describe weight-frequencies and ultimately to predict annual weight change per square meter for each weight class. Reef habitat covers a total 2,467,550 m2 at Lababia and produces an estimated 248,397 kg/y (dry weight) of corymbose Acropora, of which 203,897 kg is produced on the reef flat/crest. We conservatively estimate that 30,706.6 kg of whole, dry, corymbose, Acropora can be sustainably harvested from the reef flat/crest habitat each year provided each culled colony weighs at least 1805 g when dry (or is at least 46 cm along its major axis). Artisanal lime-makers convert 24.8% of whole-colony weight into marketable lime, thus we estimate 7615.2 g of lime can be sustainably produced annually from corymbose Acropora. This value incorporates several safety margins, and should lead to proper management of live coral harvest. Importantly, the guideline recognizes village rights to exploit its marine resources, is consistent with village needs for income, and balances an equally strong village

  4. Estimating Sustainable Live-Coral Harvest at Kamiali Wildlife Management Area, Papua New Guinea.

    Directory of Open Access Journals (Sweden)

    Ken Longenecker

    Full Text Available Live coral is harvested throughout the Indo-West Pacific to make lime, used in the consumption of the world's fourth-most consumed drug, betel nut. Coral harvesting is an environmental concern; however, because lime-making is one of the few sources of income in some areas of Papua New Guinea (PNG, the practice is unlikely to stop. To better manage coral harvest, we used standard fishery-yield methods to generate sustainable-harvest guidelines for corymbose Acropora species found on the reef flat and crest at Lababia, PNG. We constructed a yield curve (weight-specific net annual-dry-weight production by: 1 describing the allometric relationship between colony size and dry weight, and using that relationship to estimate the dry weight of Acropora colonies in situ; 2 estimating annual growth of Acropora colonies by estimating in situ, and describing the relationship between, colony dry weight at the beginning and end of one year; and 3 conducting belt-transect surveys to describe weight-frequencies and ultimately to predict annual weight change per square meter for each weight class. Reef habitat covers a total 2,467,550 m2 at Lababia and produces an estimated 248,397 kg/y (dry weight of corymbose Acropora, of which 203,897 kg is produced on the reef flat/crest. We conservatively estimate that 30,706.6 kg of whole, dry, corymbose, Acropora can be sustainably harvested from the reef flat/crest habitat each year provided each culled colony weighs at least 1805 g when dry (or is at least 46 cm along its major axis. Artisanal lime-makers convert 24.8% of whole-colony weight into marketable lime, thus we estimate 7615.2 g of lime can be sustainably produced annually from corymbose Acropora. This value incorporates several safety margins, and should lead to proper management of live coral harvest. Importantly, the guideline recognizes village rights to exploit its marine resources, is consistent with village needs for income, and balances an equally

  5. Outcomes of percutaneous nephrolithotomy versus open stone surgery for patients with staghorn calculi

    Directory of Open Access Journals (Sweden)

    Friedrich Bo-Yuan Zhang

    2017-06-01

    Conclusion: Both OSS and PNL are viable options for the management of staghorn stones. Considering the lower postoperative complication rate and need for auxiliary treatment, we suggest that OSS is more suitable for staghorn stones with large burdens. OSS should still be considered as a valid treatment for patients with complex staghorn calculi, although PNL is a less invasive treatment option in most cases.

  6. Hidden impacts of ocean acidification to live and dead coral framework.

    Science.gov (United States)

    Hennige, S J; Wicks, L C; Kamenos, N A; Perna, G; Findlay, H S; Roberts, J M

    2015-08-22

    Cold-water corals, such as Lophelia pertusa, are key habitat-forming organisms found throughout the world's oceans to 3000 m deep. The complex three-dimensional framework made by these vulnerable marine ecosystems support high biodiversity and commercially important species. Given their importance, a key question is how both the living and the dead framework will fare under projected climate change. Here, we demonstrate that over 12 months L. pertusa can physiologically acclimate to increased CO2, showing sustained net calcification. However, their new skeletal structure changes and exhibits decreased crystallographic and molecular-scale bonding organization. Although physiological acclimatization was evident, we also demonstrate that there is a negative correlation between increasing CO2 levels and breaking strength of exposed framework (approx. 20-30% weaker after 12 months), meaning the exposed bases of reefs will be less effective 'load-bearers', and will become more susceptible to bioerosion and mechanical damage by 2100. © 2015 The Authors.

  7. Additive effects of the herbicide glyphosate and elevated temperature on the branched coral Acropora formosa in Nha Trang, Vietnam

    NARCIS (Netherlands)

    Amid, C.; Olstedt, M.; Gunnarsson, J.S.; Lan, Le H.; Tran Thi Minh, H.; Brink, van den P.J.; Hellström, M.; Tedengren, M.

    2017-01-01

    The combined effects of the herbicide glyphosate and elevated temperature were studied on the tropical staghorn coral Acropora formosa, in Nha Trang bay, Vietnam. The corals were collected from two different reefs, one close to a polluted fish farm and one in a marine-protected area (MPA). In the

  8. Environmental assessment of metal exposure to corals living in Castle Harbour, Bermuda

    Science.gov (United States)

    Prouty, N.G.; Goodkin, N.F.; Jones, R.; Lamborg, C.H.; Storlazzi, C.D.; Hughen, K.A.

    2013-01-01

    Environmental contamination in Castle Harbour, Bermuda, has been linked to the dissolution and leaching of contaminants from the adjacent marine landfill. This study expands the evidence for environmental impact of leachate from the landfill by quantitatively demonstrating elevated metal uptake over the last 30 years in corals growing in Castle Harbour. Coral Pb/Ca, Zn/Ca and Mn/Ca ratios and total Hg concentrations are elevated relative to an adjacent control site in John Smith's Bay. The temporal variability in the Castle Harbour coral records suggests that while the landfill has increased in size over the last 35 years, the dominant input of metals is through periodic leaching of contaminants from the municipal landfill and surrounding sediment. Elevated contaminants in the surrounding sediment suggest that resuspension is an important transport medium for transferring heavy metals to corals. Increased winds, particularly during the 1990s, were accompanied by higher coral metal composition at Castle Harbour. Coupled with wind-induced resuspension, interannual changes in sea level within the Harbour can lead to increased bioavailability of sediment-bound metals and subsequent coral metal assimilation. At John Smith's Bay, large scale convective mixing may be driving interannual metal variability in the coral record rather than impacts from land-based activities. Results from this study provide important insights into the coupling of natural variability and anthropogenic input of contaminants to the nearshore environment.

  9. Percutaneous nephrolithotomy of bilateral staghorn renal calculi in pediatric patients: 12 years experience in a tertiary care centre.

    Science.gov (United States)

    Purkait, Bimalesh; Kumar, Manoj; Sokhal, Ashok Kumar; Bansal, Ankur; Sankhwar, Satya Narayan; Gupta, Ashok Kumar

    2017-08-01

    To assess the outcomes of percutaneous nephrolithotomy (PCNL) in bilateral staghorn calculi in pediatric patients, we have performed a retrospective analysis. Staghorn calculus is defined as stone that fills a greater part of the pelvic-caliceal system. Still, in developing countries, patients may present with staghorn calculus. PCNL is the preferred treatment modality for staghorn calculus both in adult and children. Our study included fifty-one pediatric patients (calculus in children needs expertise. PCNL in B/L staghorn renal calculus in children is safe and effective. B/L staghorn renal calculi with compromised renal function have higher chance of complications including bleeding.

  10. Association of staphylococcus cohnii subspecies urealyticum infection with recurrence of renal staghorn stone

    OpenAIRE

    Shahandeh, Zahra; Shafi, Hamid; Sadighian, Farahnaz

    2015-01-01

    Background: Stphylococcus cohnii is an organism of coagulase negative species which is considered as normal flora. However, it has been isolated from urinary tract infections and surgical prostheses but its relation with staghorn stones has not been reported, yet. Case Presentation: A 50-years-old woman presented with left renal staghorn stone in June 2014. She had bilateral staghorn stones 7 years ago. Staphylococcus cohnii subspecies urealyticum were detected from a removed stone. After 7 y...

  11. 75 FR 39917 - Fisheries of the Caribbean, Gulf of Mexico, and South Atlantic; Coral and Coral Reefs off the...

    Science.gov (United States)

    2010-07-13

    ... the Caribbean, Gulf of Mexico, and South Atlantic; Coral and Coral Reefs off the Southern Atlantic... regulations implementing the Fishery Management Plan for Coral, Coral Reefs, and Live/Hardbottom Habitat of... Cancer Institute (http:// [[Page 39918

  12. Cold-water coral ecosystems in Cassidaigne Canyon: An assessment of their environmental living conditions

    OpenAIRE

    Fabri, Marie-claire; Bargain, Annaelle; Pairaud, Ivane; Pedel, Laura; Taupier-letage, I.

    2017-01-01

    The Cassidaigne canyon is one of the two canyons (together with Lacaze-Duthiers) of the French Mediterranean coast in which cold-water corals have settled and formed large colonies, providing a structural habitat for other species. Nevertheless, the communities settled in the Cassidaigne canyon are physically impacted by discharges of bauxite residues. New information on the distribution of the species Madrepora oculata and the associated species diversity in Cassidaigne canyon was provid...

  13. Living upside down: patterns of red coral settlement in a cave

    Science.gov (United States)

    Rugiu, Luca; Cerrano, Carlo; Abbiati, Marco

    2018-01-01

    Background Larval settlement and intra-specific interactions during the recruitment phase are crucial in determining the distribution and density of sessile marine populations. Marine caves are confined and stable habitats. As such, they provide a natural laboratory to study the settlement and recruitment processes in sessile invertebrates, including the valuable Mediterranean red coral Corallium rubrum. In the present study, the spatial and temporal variability of red coral settlers in an underwater cave was investigated by demographic and genetic approaches. Methods Sixteen PVC tiles were positioned on the walls and ceiling of the Colombara Cave, Ligurian Sea, and recovered after twenty months. A total of 372 individuals of red coral belonging to two different reproductive events were recorded. Basal diameter, height, and number of polyps were measured, and seven microsatellites loci were used to evaluate the genetic relationships among individuals and the genetic structure. Results Significant differences in the colonization rate were observed both between the two temporal cohorts and between ceiling and walls. No genetic structuring was observed between cohorts. Overall, high levels of relatedness among individuals were found. Conclusion The results show that C. rubrumindividuals on tiles are highly related at very small spatial scales, suggesting that nearby recruits are likely to be sibs. Self-recruitment and the synchronous settlement of clouds of larvae could be possible explanations for the observed pattern. PMID:29844950

  14. Complete staghorn calculus in polycystic kidney disease: infection is still the cause.

    Science.gov (United States)

    Mao, Zhiguo; Xu, Jing; Ye, Chaoyang; Chen, Dongping; Mei, Changlin

    2013-08-01

    Kidney stones in patients with autosomal dominant polycystic kidney disease are common, regarded as the consequence of the combination of anatomic abnormality and metabolic risk factors. However, complete staghorn calculus is rare in polycystic kidney disease and predicts a gloomy prognosis of kidney. For general population, recent data showed metabolic factors were the dominant causes for staghorn calculus, but for polycystic kidney disease patients, the cause for staghorn calculus remained elusive. We report a case of complete staghorm calculus in a polycystic kidney disease patient induced by repeatedly urinary tract infections. This 37-year-old autosomal dominant polycystic kidney disease female with positive family history was admitted in this hospital for repeatedly upper urinary tract infection for 3 years. CT scan revealed the existence of a complete staghorn calculus in her right kidney, while there was no kidney stone 3 years before, and the urinary stone component analysis showed the composition of calculus was magnesium ammonium phosphate. UTI is an important complication for polycystic kidney disease and will facilitate the formation of staghorn calculi. As staghorn calculi are associated with kidney fibrosis and high long-term renal deterioration rate, prompt control of urinary tract infection in polycystic kidney disease patient will be beneficial in preventing staghorn calculus formation.

  15. Association of staphylococcus cohnii subspecies urealyticum infection with recurrence of renal staghorn stone.

    Science.gov (United States)

    Shahandeh, Zahra; Shafi, Hamid; Sadighian, Farahnaz

    2015-01-01

    Stphylococcus cohnii is an organism of coagulase negative species which is considered as normal flora. However, it has been isolated from urinary tract infections and surgical prostheses but its relation with staghorn stones has not been reported, yet. A 50-years-old woman presented with left renal staghorn stone in June 2014. She had bilateral staghorn stones 7 years ago. Staphylococcus cohnii subspecies urealyticum were detected from a removed stone. After 7 years, recurrence staghorn stone in her left kidney was diagnosed and patient underwent another surgery. The patient had several attacks of cystitis during these 7 years. The results of stone and urine cultures revealed staphylococcus cohnii subspecies urealyticum. This case report emphasizes a possible association between staphylococcus cohnii subspecies urealyticum infection and recurrence renal staghhorn stone.

  16. Antegrade ureteroscopic assistance during percutaneous nephrolithotomy for complete renal staghorn stone: Technique and outcomes

    Directory of Open Access Journals (Sweden)

    Yuh-Shyan Tsai

    2015-03-01

    Conclusion: Such an ancillary procedure might be suitable for the management of complete staghorn stones or other complex renal stones in patients in whom adequate intracalyceal space was not available for the creation of nephrostomy access.

  17. Comparison of supine and prone positions for percutaneous nephrolithotomy in treatment of staghorn stones.

    Science.gov (United States)

    Gökce, Mehmet İlker; Ibiş, Arif; Sancı, Adem; Akıncı, Aykut; Bağcı, Uygar; Ağaoğlu, Eylül Asya; Süer, Evren; Gülpınar, Ömer

    2017-12-01

    Percutaneous nephrolithotomy (PNL) is the primary treatment modality for management of staghorn stones. PNL in supine position has important advantages over prone positon. However, studies comparing prone and supine positions for PNL in staghorn stone patients have conflicting results, and the aim of the current study was to compare prone and supine positions for PNL in staghorn stone cases. Data of patients underwent PNL for staghorn stones in supine or prone position by a single urologist were collected prospectively. The supine and prone position groups were compared for stone free rate (SFR) and complication rates. All patients were evaluated with NCCT for evaluation of SFR. Chi-square test was used to compare categorical variables and Student t test was applied for continuous variables of the treatment groups. The groups were similar for demographic and stone-related characteristics. Multi-caliceal and intercostal access was more common in prone position. Operation duration was significantly shorter and hemoglobin drop was significantly less in supine group. SFR was 64.1 and 60.4% in the supine and prone groups, respectively (p = 0.72). Complication rates were similar in the two groups but Clavien III complications were observed in two patients in the prone group. PNL in supine position is an effective treatment for management of staghorn stones. The need for multi-caliceal and intercostal puncture is less when combined with retrograde intrarenal surgery. PNL in supine position should be considered as primary treatment option in staghorn stone cases.

  18. Assessing the living and dead proportions of cold-water coral colonies: implications for deep-water Marine Protected Area monitoring in a changing ocean

    Directory of Open Access Journals (Sweden)

    Johanne Vad

    2017-10-01

    Full Text Available Coral growth patterns result from an interplay of coral biology and environmental conditions. In this study colony size and proportion of live and dead skeletons in the cold-water coral (CWC Lophelia pertusa (Linnaeus, 1758 were measured using video footage from Remotely Operated Vehicle (ROV transects conducted at the inshore Mingulay Reef Complex (MRC and at the offshore PISCES site (Rockall Bank in the NE Atlantic. The main goal of this paper was to explore the development of a simple method to quantify coral growth and its potential application as an assessment tool of the health of these remote habitats. Eighteen colonies were selected and whole colony and dead/living layer size were measured. Live to dead layer ratios for each colony were then determined and analysed. The age of each colony was estimated using previously published data. Our paper shows that: (1 two distinct morphotypes can be described: at the MRC, colonies displayed a ‘cauliflower-shaped’ morphotype whereas at the PISCES site, colonies presented a more flattened ‘bush-shaped’ morphotype; (2 living layer size was positively correlated with whole colony size; (3 live to dead layer ratio was negatively correlated to whole colony size; (4 live to dead layer ratio never exceeded 0.27. These results suggest that as a colony develops and its growth rate slows down, the proportion of living polyps in the colony decreases. Furthermore, at least 73% of L. pertusa colonies are composed of exposed dead coral skeleton, vulnerable to ocean acidification and the associated shallowing of the aragonite saturation horizon, with significant implications for future deep-sea reef framework integrity. The clear visual contrast between white/pale living and grey/dark dead portions of the colonies also gives a new way by which they can be visually monitored over time. The increased use of marine autonomous survey vehicles offers an important new platform from which such a surveying

  19. The genetics of colony form and function in Caribbean Acropora corals.

    Science.gov (United States)

    Hemond, Elizabeth M; Kaluziak, Stefan T; Vollmer, Steven V

    2014-12-17

    Colonial reef-building corals have evolved a broad spectrum of colony morphologies based on coordinated asexual reproduction of polyps on a secreted calcium carbonate skeleton. Though cnidarians have been shown to possess and use similar developmental genes to bilaterians during larval development and polyp formation, little is known about genetic regulation of colony morphology in hard corals. We used RNA-seq to evaluate transcriptomic differences between functionally distinct regions of the coral (apical branch tips and branch bases) in two species of Caribbean Acropora, the staghorn coral, A. cervicornis, and the elkhorn coral, A. palmata. Transcriptome-wide gene profiles differed significantly between different parts of the coral colony as well as between species. Genes showing differential expression between branch tips and bases were involved in developmental signaling pathways, such as Wnt, Notch, and BMP, as well as pH regulation, ion transport, extracellular matrix production and other processes. Differences both within colonies and between species identify a relatively small number of genes that may contribute to the distinct "staghorn" versus "elkhorn" morphologies of these two sister species. The large number of differentially expressed genes supports a strong division of labor between coral branch tips and branch bases. Genes involved in growth of mature Acropora colonies include the classical signaling pathways associated with development of cnidarian larvae and polyps as well as morphological determination in higher metazoans.

  20. Diurnal productivity and apparent 14C-calcification in the staghorn coral, Acropora acuminata

    International Nuclear Information System (INIS)

    Barnes, D.J.; Crossland, C.J.

    1978-01-01

    The rate of 14 C-fixation by Acropora acuminata tissues showed a marked increase after dawn. However, maximum 14 C-fixation was not achieved until early afternoon. The apparent 14 C-incorporation rate into the skeleton of whole branches reached a peak around noon. However, the major period of 14 C-deposition occurred from noon to mid-afternoon. The broad peak of 14 C-incorporation into skeleton of whole branches reflects two rate maxima; a late-morning maximum of zooxanthellae-free terminal calices, probably related to translocation of fixed carbon from basal tissues; and an early afternoon maximum for the zooxanthellae-containing basal areas of branches. (author)

  1. 50 CFR 226.216 - Critical habitat for elkhorn (Acropora palmata) and staghorn (A. cervicornis) corals.

    Science.gov (United States)

    2010-10-01

    ... of the Atlantic Ocean offshore of Palm Beach, Broward, Miami-Dade, and Monroe counties, Florida, and three specific areas of the Atlantic Ocean and Caribbean Sea offshore of the U.S. Territories of Puerto Rico and the U.S. Virgin Islands. The boundaries of each specific critical habitat area are described...

  2. Cellular organization and spectral diversity of GFP-like proteins in live coral cells studied by single and multiphoton imaging and microspectroscopy

    Science.gov (United States)

    Salih, Anya; Cox, Guy C.; Larkum, Anthony W.

    2003-07-01

    Tissues of many marine invertebrates of class Anthozoa contain intensely fluorescent or brightly coloured pigments. These pigments belong to a family of photoactive proteins closely related to Green Fluorescent Protein (GFP), and their emissions range from blue to red wavelengths. The great diversity of these pigments has only recently been realised. To investigate the role of these proteins in corals, we have performed an in vivo fluorescent pigment (FP) spectral and cellular distribution analyses in live coral cells using single and multi-photon laser scanning imaging and microspectroscopy. These analyses revealed that even single colour corals contain spectroscopically heterogeneous pigment mixtures, with 2-5 major colour types in the same area of tissue. They were typically arranged in step-wise light emission energy gradients (e.g. blue, green, yellow, red). The successive overlapping emission-excitation spectral profiles of differently coloured FPs suggested that they were suited for sequential energy coupling. Traces of red FPs (emission = 570-660 nm) were present, even in non-red corals. We confirmed that radiative energy transfer could occur between separate granules of blue and green FPs and that energy transfer was inversely proportional to the square of the distance between them. Multi-photon micro-spectrofluorometric analysis gave significantly improved spectral resolution by restricting FP excitation to a single point in the focal plane of the sample. Pigment heterogeneity at small scales within granules suggested that fluorescence resonance energy transfer (FRET) might be occurring, and we confirmed that this was the case. Thus, energy transfer can take place both radiatively and by FRET, probably functioning in photoprotection by dissipation of excessive solar radiation.

  3. 76 FR 66273 - Snapper-Grouper Fishery Off the Southern Atlantic States and Coral and Coral Reefs Fishery in the...

    Science.gov (United States)

    2011-10-26

    ...-Grouper Fishery Off the Southern Atlantic States and Coral and Coral Reefs Fishery in the South Atlantic... the South Atlantic Region and the FMP for Coral, Coral Reefs, and Live/Hard Bottom Habitats of the... Aquariums to collect, with certain conditions, various species of reef fish and live rock in Federal waters...

  4. Coral Reefs: Beyond Mortality?

    Directory of Open Access Journals (Sweden)

    Charles Sheppard

    2000-01-01

    Full Text Available The scale of the collapse of coral reef communities in 1998 following a warming episode (Wilkinson, 2000 was unprecedented, and took many people by surprise. The Indian Ocean was the worst affected with a coral mortality over 75% in many areas such as the Chagos Archipelago (Sheppard, 1999, Seychelles (Spencer et al., 2000 and Maldives (McClanahan, 2000. Several other locations were affected at least as much, with mortality reaching 100% (to the nearest whole number; this is being compiled by various authors (e.g., CORDIO, in press. For example, in the Arabian Gulf, coral mortality is almost total across many large areas of shallow water (Sheppard, unpublished; D. George and D. John, personal communication. The mortality is patchy of course, depending on currents, location inside or outside lagoons, etc., but it is now possible to swim for over 200 m and see not one remaining living coral or soft coral on some previously rich reefs.

  5. Is tubeless percutaneous nephrolithotomy a feasible technique for the treatment of staghorn calculi?

    Science.gov (United States)

    Lee, Sang Cheol; Kim, Chang Hee; Kim, Kwang Taek; Kim, Tae Beom; Kim, Khae Hawn; Jung, Han; Yoon, Sang Jin; Oh, Jin Kyu

    2013-10-01

    Tubeless percutaneous nephrolithotomy (PNL) remains a challenging technique for the surgical treatment of staghorn renal calculi. Our study was designed to compare surgical outcomes between conventional and tubeless PNL. We retrospectively enrolled consecutive patients who underwent conventional or tubeless PNL under general anesthesia performed by a single surgeon (H.J.) for the treatment of staghorn calculi between 2003 and 2012. All patients were divided into two groups: group 1 included patients who underwent conventional PNL and group 2 included patients who were managed by tubeless PNL for the treatment of staghorn calculi. Preoperative and postoperative parameters were analyzed between the two groups, including age, stone burden, complications, any interventions, and duration of hospital stay. A total of 165 patients (group 1, 106; group 2, 59) were enrolled in the study. No significant differences in age, sex, body mass index, or stone laterality were observed between the two groups. The mean stone burdens (±standard deviation) of group 1 and group 2 were 633.6 (±667.4) and 529.9 (±362.8), respectively (p=0.271). The postoperative stone-free clearance rate was higher in group 2 (78.0%) than in group 1 (69.8%); however, the difference was not clinically significant (p=0.127). In addition, no significant differences in postoperative complications, including fever, bleeding, infection, or additional interventions, were observed between the two groups. Our results demonstrated that tubeless PNL has the same effectiveness and safety as conventional PNL in the treatment of staghorn calculi. Tubeless PNL may be feasible for managing renal staghorn calculi.

  6. Missing "Links" in Bioinformatics Education: Expanding Students' Conceptions of Bioinformatics Using a Biodiversity Database of Living and Fossil Reef Corals

    Science.gov (United States)

    Nehm, Ross H.; Budd, Ann F.

    2006-01-01

    NMITA is a reef coral biodiversity database that we use to introduce students to the expansive realm of bioinformatics beyond genetics. We introduce a series of lessons that have students use this database, thereby accessing real data that can be used to test hypotheses about biodiversity and evolution while targeting the "National Science …

  7. Selective feeding by coral reef fishes on coral lesions associated with brown band and black band disease

    Science.gov (United States)

    Chong-Seng, K. M.; Cole, A. J.; Pratchett, M. S.; Willis, B. L.

    2011-06-01

    Recent studies have suggested that corallivorous fishes may be vectors for coral disease, but the extent to which fishes actually feed on and thereby potentially transmit coral pathogens is largely unknown. For this study, in situ video observations were used to assess the level to which fishes fed on diseased coral tissues at Lizard Island, northern Great Barrier Reef. Surveys conducted at multiple locations around Lizard Island revealed that coral disease prevalence, especially of brown band disease (BrB), was higher in lagoon and backreef locations than in exposed reef crests. Accordingly, video cameras were deployed in lagoon and backreef habitats to record feeding by fishes during 1-h periods on diseased sections of each of 44 different coral colonies. Twenty-five species from five fish families (Blennidae, Chaetodontidae, Gobiidae, Labridae and Pomacentridae) were observed to feed on infected coral tissues of staghorn species of Acropora that were naturally infected with black band disease (BBD) or brown band disease (BrB). Collectively, these fishes took an average of 18.6 (±5.6 SE) and 14.3 (±6.1 SE) bites per hour from BBD and BrB lesions, respectively. More than 40% (408/948 bites) and nearly 25% (314/1319 bites) of bites were observed on lesions associated with BBD and BrB, respectively, despite these bands each representing only about 1% of the substratum available. Moreover, many corallivorous fishes ( Labrichthys unilineatus, Chaetodon aureofasciatus, C. baronessa, C. lunulatus, C. trifascialis, Cheiloprion labiatus) selectively targeted disease lesions over adjacent healthy coral tissues. These findings highlight the important role that reef fishes may play in the dynamics of coral diseases, either as vectors for the spread of coral disease or in reducing coral disease progression through intensive and selective consumption of diseased coral tissues.

  8. Evaluation of Stony Coral Indicators for Coral Reef Management.

    Science.gov (United States)

    Colonies of reef-building stony corals at 57 stations around St. Croix, U.S. Virgin Islands were characterized by species, size and percentage of living tissue. Taxonomic, biological and physical indicators of coral condition were derived from these measurements and assessed for ...

  9. Percutaneous nephrolithotomy for staghorn calculi: a single center's experience over 15 years.

    Science.gov (United States)

    Soucy, Frédéric; Ko, Raymond; Duvdevani, Mordechai; Nott, Linda; Denstedt, John D; Razvi, Hassan

    2009-10-01

    Percutaneous nephrolithotomy (PCNL) for staghorn calculi is one of the more challenging endourologic procedures. Although excellent stone-free rates are universally reported in the literature, complication rates vary widely, especially related to the need for blood transfusion. The purpose of this study was to evaluate the outcomes of PCNL for patients with staghorn calculi in a large series of patients at a single, tertiary referral, endourologic stone center. Between July 1990 and December 2005, 1338 patients underwent PCNL for renal stone disease at our institution. Among this group, 509 procedures were performed for patients with a partial or complete staghorn calculus. Data analysis included procedure time, length of hospital stay, number of access tracts, transfusion rates, other early and late complications, and stone-free status. Mean patient age was 53.8 years (range 4-84 yrs). The average procedure time was 104 minutes. Sixteen percent of the cases needed multiple access tracts (range 2-5), with the lower calix being the most commonly used in 64.1%, followed by the upper calix in 18.5% and the middle calix in 17.4%. Various intracorporeal lithotriptors were used, including ultrasound, pneumatic, electrohydraulic, and holmium:yttrium-aluminium-garnet laser. The transfusion rate among this group was 0.8%. There was no statistically significant difference in transfusion rates (0.7%-1.2% P = 0.24) or other major complications in patients who were treated with either a single tract or among those needing multiple tracts. Stone-free rates at hospital discharge and at 3 months follow-up were 78% and 91%, respectively. PCNL is a safe and effective procedure in the management of staghorn calculi, with outcomes similar to those reported for percutaneous management of smaller volume nonstaghorn stones. Attention to accurate tract selection and placement as well as possession of the full array of endourologic equipment are essential to achieving an excellent outcome.

  10. Factors affecting stone-free rate and complications of percutaneous nephrolithotomy for treatment of staghorn stone.

    Science.gov (United States)

    el-Nahas, Ahmed R; Eraky, Ibrahim; Shokeir, Ahmed A; Shoma, Ahmed M; el-Assmy, Ahmed M; el-Tabey, Nasr A; Soliman, Shady; Elshal, Ahmed M; el-Kappany, Hamdy A; el-Kenawy, Mahmoud R

    2012-06-01

    To determine factors affecting the stone-free rate and complications of percutaneous nephrolithotomy (PNL) for treatment of staghorn stones. The computerized database of patients who underwent PNL for treatment of staghorn stones between January 2003 and January 2011 was reviewed. All perioperative complications were recorded and classified according to modified Clavien classification system. The stone-free rate was evaluated with low-dose noncontrast computed tomography (CT). Univariate and multivariate statistical analyses were performed to determine factors affecting stone-free and complication rates. The study included 241 patients (125 male and 116 female) with a mean age of 48.7 ±14.3 years. All patients underwent 251 PNL (10 patients had bilateral stones). The stone-free rate of PNL monotherapy was 56% (142 procedures). At 3 months, the stone-free rate increased to 73% (183 kidneys) after shock wave lithotripsy. Independent risk factors for residual stones were complete staghorn stone and presence of secondary calyceal stones (relative risks were 2.2 and 3.1, respectively). The complication rate was 27% (68 PNL). Independent risk factors for development of complications were performance of the procedure by urologists other than experienced endourologist and positive preoperative urine culture (relative risks were 2.2 and 2.1, respectively). Factors affecting the incidence of residual stones after PNL are complete staghorn stones and the presence of secondary calyceal stones. Complications are significantly high if PNL is not performed by an experienced endourologist or if preoperative urine culture is positive. Copyright © 2012 Elsevier Inc. All rights reserved.

  11. Anatrophic Nephrolithotomy in the Management of Large Staghorn Calculi - A Single Centre Experience.

    Science.gov (United States)

    Keshavamurthy, Ramaiah; Karthikeyan, Vilvapathy Senguttuvan; Mallya, Ashwin; Sreenivas, Jayaram; Nelivigi, Girish Gurubasappa; Kamath, Ananth Janarthan

    2017-05-01

    With advances in endourology, open stone surgery for staghorn calculi has markedly diminished. Anatrophic Nephrolithotomy (AN) is performed for complex staghorn stones which cannot be cleared by a reasonable number of Percutaneous Nephrolithotomy (PNL) attempts. To assess the indications and outcomes of AN in the modern era. Between April 2008 and July 2015, AN was done in 14 renal units in 13 patients. In this retrospective study, demography, stone characteristics, operative details, clearance and long term outcomes were assessed. AN was performed for complex staghorn calculi involving pelvis and all calyces in 10 patients, infundibular stenosis in two patients and failed PNL in one patient. Mean (SD) in situ cold ischemia time was 47.64 (5.27) minutes. Retroperitoneal drain and double J stent were placed in all 13 patients. Median (IQR) estimated blood loss was 130 (75) ml. There was no perioperative mortality. Surgical site infection was seen in 2 patients and urosepsis in 2 patients. Drain was removed at a mean (SD) of 9.11 (6.15) days. Mean (SD) postoperative length of hospitalization was 15.44 (7.14) days. Stent removal was done in all patients between 2-8 weeks. Median (IQR) clearance was 95 (7.5%). There was no renal failure or new calculi during the follow up period {median (IQR): 1(3) years}. AN is effective in management of large staghorn calculi failed minimally invasive approaches and achieves 80%-100% clearance without much need for secondary interventions. Renal function is preserved and with emergence of laparoscopy and robotics, postoperative stay is minimized with expedited recovery and comparable results with open surgery.

  12. 76 FR 30110 - Fisheries of the Caribbean, Gulf of Mexico, and South Atlantic; Coral and Coral Reefs Off the...

    Science.gov (United States)

    2011-05-24

    ... the Caribbean, Gulf of Mexico, and South Atlantic; Coral and Coral Reefs Off the Southern Atlantic..., Coral Reefs, and Live/Hardbottom Habitat of the South Atlantic Region. The applicant has requested.... HHSN261200900012C) between the National Cancer Institute ( http://www.cancer.gov/ ) and the Coral Reef Research...

  13. Impact of stone branch number on outcomes of percutaneous nephrolithotomy for treatment of staghorn calculi.

    Science.gov (United States)

    Qi, Shiyong; Li, Li; Liu, Ranlu; Qiao, Baomin; Zhang, Zhihong; Xu, Yong

    2014-02-01

    To determine the impact of staghorn calculi branch number on outcomes of percutaneous nephrolithotomy (PNL). Retrospectively, we evaluated 371 patients (386 renal units) who underwent PNL for staghorn calculi. All calculi were showed with CT three-dimensional reconstruction (3DR) imaging preoperatively. From 3DR images, the number of stone branching into minor renal calices was recorded. According to the number, patients were divided into four groups. Group 1: the branch number 2-4; Group 2: the branch number 5-7; Group 3: the branch number 8-10; Group 4: the branch number >10. The number of percutaneous tract, operative time, staged PNL, intraoperative blood loss, postoperative hospital stay, complications, main stone composition, and stone clearance rate were compared. A significantly higher ratio of multitract (pPNL (pPNL for calculi with a stone branch number ≥5. There was no statistical difference in intraoperative blood loss (p=0.101) and main stone composition (p=0.546). There was no statistically meaningful difference among the four groups based on the Clavien complication system (p=0.46). With the stone branch number more than five, the possibility of multitract and staged PNL, lower rate of stone clearance, and a longer postoperative hospital stay increases for staghorn calculi.

  14. Bacterial community dynamics are linked to patterns of coral heat tolerance

    KAUST Repository

    Ziegler, Maren

    2017-02-10

    Ocean warming threatens corals and the coral reef ecosystem. Nevertheless, corals can be adapted to their thermal environment and inherit heat tolerance across generations. In addition, the diverse microbes that associate with corals have the capacity for more rapid change, potentially aiding the adaptation of long-lived corals. Here, we show that the microbiome of reef corals is different across thermally variable habitats and changes over time when corals are reciprocally transplanted. Exposing these corals to thermal bleaching conditions changes the microbiome for heat-sensitive corals, but not for heat-tolerant corals growing in habitats with natural high heat extremes. Importantly, particular bacterial taxa predict the coral host response in a short-term heat stress experiment. Such associations could result from parallel responses of the coral and the microbial community to living at high natural temperatures. A competing hypothesis is that the microbial community and coral heat tolerance are causally linked.

  15. Bacterial community dynamics are linked to patterns of coral heat tolerance

    KAUST Repository

    Ziegler, Maren; Seneca, Francois O.; Yum, Lauren; Palumbi, Stephen R.; Voolstra, Christian R.

    2017-01-01

    Ocean warming threatens corals and the coral reef ecosystem. Nevertheless, corals can be adapted to their thermal environment and inherit heat tolerance across generations. In addition, the diverse microbes that associate with corals have the capacity for more rapid change, potentially aiding the adaptation of long-lived corals. Here, we show that the microbiome of reef corals is different across thermally variable habitats and changes over time when corals are reciprocally transplanted. Exposing these corals to thermal bleaching conditions changes the microbiome for heat-sensitive corals, but not for heat-tolerant corals growing in habitats with natural high heat extremes. Importantly, particular bacterial taxa predict the coral host response in a short-term heat stress experiment. Such associations could result from parallel responses of the coral and the microbial community to living at high natural temperatures. A competing hypothesis is that the microbial community and coral heat tolerance are causally linked.

  16. Genotype and local environment dynamically influence growth, disturbance response and survivorship in the threatened coral, Acropora cervicornis.

    Science.gov (United States)

    Drury, Crawford; Manzello, Derek; Lirman, Diego

    2017-01-01

    The relationship between the coral genotype and the environment is an important area of research in degraded coral reef ecosystems. We used a reciprocal outplanting experiment with 930 corals representing ten genotypes on each of eight reefs to investigate the influence of genotype and the environment on growth and survivorship in the threatened Caribbean staghorn coral, Acropora cervicornis. Coral genotype and site were strong drivers of coral growth and individual genotypes exhibited flexible, non-conserved reaction norms, complemented by ten-fold differences in growth between specific G-E combinations. Growth plasticity may diminish the influence of local adaptation, where foreign corals grew faster than native corals at their home sites. Novel combinations of environment and genotype also significantly affected disturbance response during and after the 2015 bleaching event, where these factors acted synergistically to drive variation in bleaching and recovery. Importantly, small differences in temperature stress elicit variable patterns of survivorship based on genotype and illustrate the importance of novel combinations of coral genetics and small differences between sites representing habitat refugia. In this context, acclimatization and flexibility is especially important given the long lifespan of corals coping with complex environmental change. The combined influence of site and genotype creates short-term differences in growth and survivorship, contributing to the standing genetic variation needed for adaptation to occur over longer timescales and the recovery of degraded reefs through natural mechanisms.

  17. Genotype and local environment dynamically influence growth, disturbance response and survivorship in the threatened coral, Acropora cervicornis.

    Directory of Open Access Journals (Sweden)

    Crawford Drury

    Full Text Available The relationship between the coral genotype and the environment is an important area of research in degraded coral reef ecosystems. We used a reciprocal outplanting experiment with 930 corals representing ten genotypes on each of eight reefs to investigate the influence of genotype and the environment on growth and survivorship in the threatened Caribbean staghorn coral, Acropora cervicornis. Coral genotype and site were strong drivers of coral growth and individual genotypes exhibited flexible, non-conserved reaction norms, complemented by ten-fold differences in growth between specific G-E combinations. Growth plasticity may diminish the influence of local adaptation, where foreign corals grew faster than native corals at their home sites. Novel combinations of environment and genotype also significantly affected disturbance response during and after the 2015 bleaching event, where these factors acted synergistically to drive variation in bleaching and recovery. Importantly, small differences in temperature stress elicit variable patterns of survivorship based on genotype and illustrate the importance of novel combinations of coral genetics and small differences between sites representing habitat refugia. In this context, acclimatization and flexibility is especially important given the long lifespan of corals coping with complex environmental change. The combined influence of site and genotype creates short-term differences in growth and survivorship, contributing to the standing genetic variation needed for adaptation to occur over longer timescales and the recovery of degraded reefs through natural mechanisms.

  18. Global warming transforms coral reef assemblages.

    Science.gov (United States)

    Hughes, Terry P; Kerry, James T; Baird, Andrew H; Connolly, Sean R; Dietzel, Andreas; Eakin, C Mark; Heron, Scott F; Hoey, Andrew S; Hoogenboom, Mia O; Liu, Gang; McWilliam, Michael J; Pears, Rachel J; Pratchett, Morgan S; Skirving, William J; Stella, Jessica S; Torda, Gergely

    2018-04-01

    Global warming is rapidly emerging as a universal threat to ecological integrity and function, highlighting the urgent need for a better understanding of the impact of heat exposure on the resilience of ecosystems and the people who depend on them 1 . Here we show that in the aftermath of the record-breaking marine heatwave on the Great Barrier Reef in 2016 2 , corals began to die immediately on reefs where the accumulated heat exposure exceeded a critical threshold of degree heating weeks, which was 3-4 °C-weeks. After eight months, an exposure of 6 °C-weeks or more drove an unprecedented, regional-scale shift in the composition of coral assemblages, reflecting markedly divergent responses to heat stress by different taxa. Fast-growing staghorn and tabular corals suffered a catastrophic die-off, transforming the three-dimensionality and ecological functioning of 29% of the 3,863 reefs comprising the world's largest coral reef system. Our study bridges the gap between the theory and practice of assessing the risk of ecosystem collapse, under the emerging framework for the International Union for Conservation of Nature (IUCN) Red List of Ecosystems 3 , by rigorously defining both the initial and collapsed states, identifying the major driver of change, and establishing quantitative collapse thresholds. The increasing prevalence of post-bleaching mass mortality of corals represents a radical shift in the disturbance regimes of tropical reefs, both adding to and far exceeding the influence of recurrent cyclones and other local pulse events, presenting a fundamental challenge to the long-term future of these iconic ecosystems.

  19. [Clinical analysis of percutaneous nephrolithotomy for staghorn calculi with different stone branch number].

    Science.gov (United States)

    Qi, Shi-yong; Zhang, Zhi-hong; Zhang, Chang-wen; Liu, Ran-lu; Shi, Qi-duo; Xu, Yong

    2013-12-01

    To investigate the impact of staghorn stone branch number on outcomes of percutaneous nephrolithotomy (PNL). From January 2009 to January 2013, the 371 patients with staghorn stones who were referred to our hospital for PNL were considered for this study. All calculi were showed with CT 3-dimentional reconstruction (3-DR) imaging. The computerized database of the patients had been reviewed. Our exclusion criterion was patients with congenital renal anomalies, such as horse-shoe and ectopic kidneys. And borderline stones that branched to one major calyx only were also not included. From 3-DR images, the number of stone branching into minor renal calices was recorded. We made "3" as the branch breakdown between groups. And the patients were divided into four groups. The number of percutaneous tract, operative time, staged PNL, intra-operative blood loss, complications, stone clearance rate, and postoperative hospital day were compared. The 371 patients (386 renal units) underwent PNL successfully, included 144 single-tract PNL, 242 multi-tract PNL, 97 staged PNL. The average operative time was (100 ± 50) minutes; the average intra-operative blood loss was (83 ± 67) ml. The stone clearance rate were 61.7% (3 days) and 79.5% (3 months). The postoperative hospital stay was (6.9 ± 3.4) days. A significantly higher ratio of multi-tract (χ(2) = 212.220, P PNL (χ(2) = 49.679, P PNL for calculi with stone branch number ≥ 5. There was no statistically meaningful difference among the 4 groups based on Clavien complication system (P = 0.460). The possibility of multi-tract and staged PNL, lower rate of stone clearance and longer postoperative hospital day increase for staghorn calculi with stone branch number more than 5.

  20. Evaluation of Stony Coral Indicators for Coral Reef ...

    Science.gov (United States)

    Colonies of reef-building stony corals at 57 stations around St. Croix, U.S. Virgin Islands were characterized by species, size and percentage of living tissue. Taxonomic, biological and physical indicators of coral condition were derived from these measurements and assessed for their response to gradients of human disturbance. The purpose of the study was to identify indicators that could be used for regulatory assessments under authority of the Clean Water Act--this requires that indicators distinguish anthropogenic disturbances from natural variation. Stony coral indicators were tested for correlation with human disturbance across gradients located on three different sides of the island. At the most intensely disturbed location, five of eight primary indicators were highly correlated with distance from the source of disturbance: Coral taxa richness, average colony size, the coefficient of variation of colony size (an indicator of colony size heterogeneity), total topographic coral surface area, and live coral surface area. An additional set of exploratory indicators related to rarity, reproductive and spawning mode, and taxonomic identity were also screened for association with disturbance at the same location. For the other two locations, there were no significant changes in indicator values and therefore no discernible effects of human activity. Coral indicators demonstrated sufficient precision to detect levels of change that would be applicable in a regio

  1. Perspectives on hypertension outcomes after single-stage clearance of a complete staghorn renal calculus

    Directory of Open Access Journals (Sweden)

    Ranjit Chaudhary

    2017-01-01

    Full Text Available A 55-year-old male presented, in June 2013, with left flank pain. Investigations revealed a complete staghorn stone. He had undergone two sittings of extracorporeal shock wave lithotripsy (ESWL in 2008 for left renal stone. One year subsequent to this, he was diagnosed with hypertension and diabetes. The management of complete staghorn stones in a single sitting is a difficult proposition. Percutaneous nephrolithotomy (PCNL is the gold standard to manage such stones. The patient was subjected to PCNL, and complete clearance was achieved in one sitting. On one-year follow-up, there was a significant reduction in blood pressure (BP and better glycemic control. Although there are several reports where hypertension has been reported after multiple sittings of ESWL, whether ESWL contributed to the genesis of hypertension and diabetes in this patient or it was simply incidental, cannot be stated with certainty. There was a significant reduction in the BP after complete stone removal, but there is uncertainty over the effect of total clearance of renal stones on hypertension, and we need to await the results of more controlled trials studying this phenomenon. A better glycemic control was perhaps achieved secondary to the eradication of recurrent urinary tract infections due to complete stone clearance.

  2. A prospective randomized trial of open surgery versus endourological stone removal in patients of staghorn stones with chronic renal failure

    Directory of Open Access Journals (Sweden)

    Anant Kumar

    2001-01-01

    Conclusion: In view of the better clearance rate and lesser cost of treatment, open surgery still has a place in the management of staghorn stones with chronic renal failure even in a tertiary urological center. However postoperative pain and a larger scar cannot be ignored.

  3. Behaviourally mediated phenotypic selection in a disturbed coral reef environment.

    Directory of Open Access Journals (Sweden)

    Mark I McCormick

    2009-09-01

    Full Text Available Natural and anthropogenic disturbances are leading to changes in the nature of many habitats globally, and the magnitude and frequency of these perturbations are predicted to increase under climate change. Globally coral reefs are one of the most vulnerable ecosystems to climate change. Fishes often show relatively rapid declines in abundance when corals become stressed and die, but the processes responsible are largely unknown. This study explored the mechanism by which coral bleaching may influence the levels and selective nature of mortality on a juvenile damselfish, Pomacentrus amboinensis, which associates with hard coral. Recently settled fish had a low propensity to migrate small distances (40 cm between habitat patches, even when densities were elevated to their natural maximum. Intraspecific interactions and space use differ among three habitats: live hard coral, bleached coral and dead algal-covered coral. Large fish pushed smaller fish further from the shelter of bleached and dead coral thereby exposing smaller fish to higher mortality than experienced on healthy coral. Small recruits suffered higher mortality than large recruits on bleached and dead coral. Mortality was not size selective on live coral. Survival was 3 times as high on live coral as on either bleached or dead coral. Subtle behavioural interactions between fish and their habitats influence the fundamental link between life history stages, the distribution of phenotypic traits in the local population and potentially the evolution of life history strategies.

  4. Benthic data for corals, macroalgae, invertebrates, and non-living bottom types from 12 sites in American Samoa, 2005-2009. (NODC Accession 0068364)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Benthic transects were repeated at 12 sites around Tutuila at various depths on the reef slopes and flats. Benthic coverage categories include coral species,...

  5. Huon Terrace IIa1, Papua New Guinea Fossil and Living Coral Isotope (delta 18O) Data for 130,000 years BP to Present

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Results of analysis of cores collected from 'fossil' massive Porites corals exposed in the raised reefs of the Huon Peninsula, Papua New Guinea (see below for age...

  6. Laing Island, Papua New Guinea Fossil and Living Coral Isotope (delta 18O) Data for 130,000 years BP to Present

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Results of analysis of cores collected from 'fossil' massive Porites corals exposed in the raised reefs of the Huon Peninsula, Papua New Guinea (see below for age...

  7. Huon Terrace VIIa3, Papua New Guinea Fossil and Living Coral Isotope (delta 18O) Data for 130,000 years BP to Present

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Results of analysis of cores collected from 'fossil' massive Porites corals exposed in the raised reefs of the Huon Peninsula, Papua New Guinea (see below for age...

  8. Huon Terrace IIa3, Papua New Guinea Fossil and Living Coral Isotope (delta 18O) Data for 130,000 years BP to Present

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Results of analysis of cores collected from 'fossil' massive Porites corals exposed in the raised reefs of the Huon Peninsula, Papua New Guinea (see below for age...

  9. Huon Terrace IIIb, Papua New Guinea Fossil and Living Coral Isotope (delta 18O) Data for 130,000 years BP to Present

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Results of analysis of cores collected from 'fossil' massive Porites corals exposed in the raised reefs of the Huon Peninsula, Papua New Guinea (see below for age...

  10. Huon Terrace VIIa1, Papua New Guinea Fossil and Living Coral Isotope (delta 18O) Data for 130,000 years BP to Present

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Results of analysis of cores collected from 'fossil' massive Porites corals exposed in the raised reefs of the Huon Peninsula, Papua New Guinea (see below for age...

  11. Huon Terrace VII1, Papua New Guinea Fossil and Living Coral Isotope (delta 18O) Data for 130,000 years BP to Present

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Results of analysis of cores collected from 'fossil' massive Porites corals exposed in the raised reefs of the Huon Peninsula, Papua New Guinea (see below for age...

  12. Madang Lagoon, Papua New Guinea Fossil and Living Coral Isotope (delta 18O) Data for 130,000 years BP to Present

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Results of analysis of cores collected from 'fossil' massive Porites corals exposed in the raised reefs of the Huon Peninsula, Papua New Guinea (see below for age...

  13. Huon Terrace V, Papua New Guinea Fossil and Living Coral Isotope (delta 18O) Data for 130,000 years BP to Present

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Results of analysis of cores collected from 'fossil' massive Porites corals exposed in the raised reefs of the Huon Peninsula, Papua New Guinea (see below for age...

  14. Madang Terrace, Papua New Guinea Fossil and Living Coral Isotope (delta 18O) Data for 130,000 years BP to Present

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Results of analysis of cores collected from 'fossil' massive Porites corals exposed in the raised reefs of the Huon Peninsula, Papua New Guinea (see below for age...

  15. Huon Terrace IIa2, Papua New Guinea Fossil and Living Coral Isotope (delta 18O) Data for 130,000 years BP to Present

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Results of analysis of cores collected from 'fossil' massive Porites corals exposed in the raised reefs of the Huon Peninsula, Papua New Guinea (see below for age...

  16. Huon Terrace VII3, Papua New Guinea Fossil and Living Coral Isotope (delta 18O) Data for 130,000 years BP to Present

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Results of analysis of cores collected from 'fossil' massive Porites corals exposed in the raised reefs of the Huon Peninsula, Papua New Guinea (see below for age...

  17. Laing Terrace, Papua New Guinea Fossil and Living Coral Isotope (delta 18O) Data for 130,000 years BP to Present

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Results of analysis of cores collected from 'fossil' massive Porites corals exposed in the raised reefs of the Huon Peninsula, Papua New Guinea (see below for age...

  18. Huon Terrace VIIa2, Papua New Guinea Fossil and Living Coral Isotope (delta 18O) Data for 130,000 years BP to Present

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Results of analysis of cores collected from 'fossil' massive Porites corals exposed in the raised reefs of the Huon Peninsula, Papua New Guinea (see below for age...

  19. Huon Peninsula, Papua New Guinea Fossil and Living Coral Isotope (delta 18O) Data for 130,000 years BP to Present

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Results of analysis of cores collected from 'fossil' massive Porites corals exposed in the raised reefs of the Huon Peninsula, Papua New Guinea (see below for age...

  20. Human activities threaten coral reefs

    International Nuclear Information System (INIS)

    Tveitdal, Svein; Bjoerke, Aake

    2002-01-01

    Research indicates that 58 per cent of the coral reefs of the world are threatened by human activities. Pollution and global heating represent some of the threats. Coral reefs just beneath the surface of the sea are very sensitive to temperature changes. Since 1979, mass death of coral reefs has been reported increasingly often. More than 1000 marine species live in the coral reefs, among these are one fourth of all marine species of fish. It is imperative that the coral reefs be preserved, as coastal communities all over the world depend on them as sources of food and as they are the raw materials for important medicines. The article discusses the threats to the coral reefs in general and does not single out any particular energy-related activity as the principal threat. For instance, the El-Nino phenomenon of the Pacific Ocean is probably involved in mass death of coral reefs and in the North Sea large parts of deep-water reefs have been crushed by heavy beam trawlers fishing for bottom fish

  1. Crowning corals

    Digital Repository Service at National Institute of Oceanography (India)

    Raghukumar, C.

    and build-awareness about the rich, diverse biological resources is warranted and a plea is made to manage the sewage, oil and thermal pollution to help preserve the biodiversity of coral and associated flora and fauna....

  2. Effect of Supine vs Prone Position on Outcomes of Percutaneous Nephrolithotomy in Staghorn Calculi: Results From the Clinical Research Office of the Endourology Society Study

    DEFF Research Database (Denmark)

    Astroza, Gaston; Lipkin, Michael; Neisius, Andreas

    2013-01-01

    To analyze the effect of patient positioning on outcomes of percutaneous nephrolithotomy (PNL) among patients with staghorn stones. The choice of optimal position for these patients undergoing PNL remains challenging. No previous studies exclusively addressing this point have been performed....

  3. Nitrification in reef corals

    Digital Repository Service at National Institute of Oceanography (India)

    Wafar, M.V.M.; Wafar, S.; David, J.J.

    . An estimate of the density of nitrifying bacteria on living corals can be made by comparing the nitrifying rates of bacterial cells and the rate of production of NO,-. Kaplan (1983) summarized the growth con- stants of marine nitrifying bacteria... Reef Con=. 3: 395-399. -, C. R. WILKINSON, V. p. VICENTE, J. M. MORELL, AND E. OTERO. 1988. Nitrate release by Carib- bean reef sponges. Limnol. Oceanogr. 33: 114- 120. CROSSLAND, C. J., AND D. J. BARNES. 1983. Dissolved nutrients and organic...

  4. Biological impacts of oil pollution: coral reefs

    Energy Technology Data Exchange (ETDEWEB)

    Knap, A H [Bermuda Biological Station, Ferry Reach (Bermuda)

    1992-01-01

    Coral reefs are the largest structures made by living things and exist as extremely productive ecosystems in tropical and sub-tropical areas of the world. Their location in nearshore waters means that there is a potential danger to corals from tanker accidents, refinery operations, oil exploration and production. There are now a number of published scientific papers concerning the effects of oils on corals. This report summarises and interprets the findings, and provides background information on the structure and ecology of coral reefs. Clean-up options and their implications are discussed in the light of the latest evidence from case histories and field experiments. (author)

  5. Regulation and control of intracellular algae (= zooxanthellae) in hard corals

    Science.gov (United States)

    Jones, R. J.; Yellowlees, D.

    1997-01-01

    To examine algal (= zooxanthellae) regulation and control, and the factors determining algal densities in hard corals, the zooxanthellae mitotic index and release rates were regularly determined in branch tips from a colony of a staghorn coral, Acropora formosa, recovering from a coral 'bleaching' event (the stress-related dissociation of the coral–algal symbiosis). Mathematical models based upon density-dependent decreases in the algal division frequency and increases in algal release rates during the post-bleaching recovery period accurately predict the observed recovery period (ca. 20 weeks). The models suggest that (i) the colony recovered its algal population from the division of the remaining zooxanthellae, and (ii) the continual loss of zooxanthellae significantly slowed the recovery of the coral. Possible reasons for the 'paradoxical' loss of healthy zooxanthellae from the bleached coral are discussed in terms of endodermal processes occurring in the recovering coral and the redistribution of newly formed zooxanthellae to aposymbiotic host cells. At a steady-state algal density of 2.1 x 106 zooxanthellae cm-2 at the end of the recovery period, the zooxanthellae would have to form a double layer of cells in the coral tissues, consistent with microscopic observations. Neighbouring colonies of A. formosa with inherently higher algal densities possess proportionately smaller zooxanthellae. Results suggest that space availability and the size of the algal symbionts determines the algal densities in the coral colonies. The large increases in the algal densities reported in corals exposed to elevated nutrient concentrations (i.e between a two- and five-fold increase in the algal standing stock) are not consistent with this theory. We suggest that increases of this magnitude are a product of the experimental conditions: reasons for this statement are discussed. We propose that the stability of the coral–algal symbiosis under non-stress conditions, and the

  6. SPECTRAL CHARACTERISTICS OF SELECTED HERMATYPIC CORALS FROM GULF OF KACHCHH, INDIA

    Directory of Open Access Journals (Sweden)

    N. Ray Chaudhury

    2012-07-01

    Full Text Available Hermatypic, scleractinian corals are the most important benthic substrates in a coral reef ecosystem. The existing, high (spatial resolution, broad-band, multi-spectral, space-borne sensors have limited capability to spatially detect and spectrally discriminate coral substrates. In situ hyperspectral signatures of eight coral targets were collected with the help of Analytical Spectral Devices FieldSpec spectroradiometer from Paga and Laku Point reefs of Gulf of Kachchh, India to study the spectral behaviour of corals. The eight coral targets consisted of seven live corals representing four distinct colony morphologies and one bleached coral target. The coral spectra were studied over a continuous range of 350 to 1350 nm. The corals strongly reflected in the NIR and MIR regions with regional central maximas located at 820 and 1070 nm respectively. In the visible region the live coral spectra conformed to "brown mode" of coral reflectance with triple-peaked pattern at 575, 600 and 650 nm. All coral spectra are characterized with two distinct absorption features: chlorophyll absorption at 675 nm and water absorption at 975 nm. The live and the bleached corals get distinguished in the visible region over 400 to 600 nm region. Water column over the targets modifies the spectral shape and magnitude. First and second-order derivatives help in identifying spectral windows to distinguish live and bleached corals.

  7. Coral reef fish assemblages at Clipperton Atoll (Eastern Tropical Pacific and their relationship with coral cover

    Directory of Open Access Journals (Sweden)

    Aurora M. Ricart

    2016-11-01

    Full Text Available Clipperton Atoll, one of the most isolated coral reefs worldwide, is of great scientific interest due to its geomorphology and high levels of endemism. This study explored the reef fish assemblage structure of Clipperton Atoll and its relationship with live coral cover. Nine stations were sampled at three sites and three depths (6, 12 and 20 m around the reef, measuring fish species richness and biomass and hermatypic coral cover (at genus level. We evaluated variation in species richness, biomass and diversity of fish assemblages among sites and depths, as well as the relationship between the entire fish assemblage composition and live coral cover. The results showed that species richness and biomass were similar among sites, but differed across depths, increasing with depth. In contrast, diversity differed among sites but not among depths. Multivariate analyses indicated that fish assemblage composition differed among sites and depths in relation to changes in cover of coral of the genera Pocillopora, Porites, Pavona and Leptoseris, which dominate at different depths. The results showed that fish species richness and diversity were low at Clipperton Atoll and that, in isolated coral reefs with a low habitat heterogeneity and low human disturbance, live coral cover has a significant influence on the spatial variation of the reef fish assemblages. This study highlights the importance of coral habitat structure in shaping coral reef fish assemblages.

  8. Coral Reef Coverage Percentage on Binor Paiton-Probolinggo Seashore

    Directory of Open Access Journals (Sweden)

    Dwi Budi Wiyanto

    2016-01-01

    Full Text Available The coral reef damage in Probolinggo region was expected to be caused by several factors. The first one comes from its society that exploits fishery by using cyanide toxin and bomb. The second one goes to the extraction of coral reef, which is used as decoration or construction materials. The other factor is likely caused by the existence of large industry on the seashore, such as Electric Steam Power Plant (PLTU Paiton and others alike. Related to the development of coral reef ecosystem, availability of an accurate data is crucially needed to support the manner of future policy, so the research of coral reef coverage percentage needs to be conducted continuously. The aim of this research is to collect biological data of coral reef and to identify coral reef coverage percentage in the effort of constructing coral reef condition basic data on Binor, Paiton, and Probolinggo regency seashore. The method used in this research is Line Intercept Transect (LIT method. LIT method is a method that used to decide benthic community on coral reef based on percentage growth, and to take note of benthic quantity along transect line. Percentage of living coral coverage in 3 meters depth on this Binor Paiton seashore that may be categorized in a good condition is 57,65%. While the rest are dead coral that is only 1,45%, other life form in 23,2%, and non-life form in 17,7%. A good condition of coral reef is caused by coral reef transplantation on the seashore, so this coral reef is dominated by Acropora Branching. On the other hand, Mortality Index (IM of coral reef resulted in 24,5%. The result from observation and calculation of coral reef is dominated by Hard Coral in Acropora Branching (ACB with coral reef coverage percentage of 39%, Coral Massive (CM with coral reef coverage percentage of 2,85%, Coral Foliose (CF with coral reef coverage percentage of 1,6%, and Coral Mushroom (CRM with coral reef coverage percentage of 8,5%. Observation in 10 meters depth

  9. Coral Reef Coverage Percentage on Binor Paiton-Probolinggo Seashore

    Directory of Open Access Journals (Sweden)

    Dwi Budi Wiyanto

    2016-02-01

    Full Text Available The coral reef damage in Probolinggo region was expected to be caused by several factors. The first one comes from its society that exploits fishery by using cyanide toxin and bomb. The second one goes to the extraction of coral reef, which is used as decoration or construction materials. The other factor is likely caused by the existence of large industry on the seashore, such as Electric Steam Power Plant (PLTU Paiton and others alike. Related to the development of coral reef ecosystem, availability of an accurate data is crucially needed to support the manner of future policy, so the research of coral reef coverage percentage needs to be conducted continuously. The aim of this research is to collect biological data of coral reef and to identify coral reef coverage percentage in the effort of constructing coral reef condition basic data on Binor, Paiton, and Probolinggo regency seashore. The method used in this research is Line Intercept Transect (LIT method. LIT method is a method that used to decide benthic community on coral reef based on percentage growth, and to take note of benthic quantity along transect line. Percentage of living coral coverage in 3 meters depth on this Binor Paiton seashore that may be categorized in a good condition is 57,65%. While the rest are dead coral that is only 1,45%, other life form in 23,2%, and non-life form in 17,7%. A good condition of coral reef is caused by coral reef transplantation on the seashore, so this coral reef is dominated by Acropora Branching. On the other hand, Mortality Index (IM of coral reef resulted in 24,5%. The result from observation and calculation of coral reef is dominated by Hard Coral in Acropora Branching (ACB with coral reef coverage percentage of 39%, Coral Massive (CM with coral reef coverage percentage of 2,85%, Coral Foliose (CF with coral reef coverage percentage of 1,6%, and Coral Mushroom (CRM with coral reef coverage percentage of 8,5%. Observation in 10 meters depth

  10. Cyanobacteria in Coral Reef Ecosystems: A Review

    Directory of Open Access Journals (Sweden)

    L. Charpy

    2012-01-01

    Full Text Available Cyanobacteria have dominated marine environments and have been reef builders on Earth for more than three million years (myr. Cyanobacteria still play an essential role in modern coral reef ecosystems by forming a major component of epiphytic, epilithic, and endolithic communities as well as of microbial mats. Cyanobacteria are grazed by reef organisms and also provide nitrogen to the coral reef ecosystems through nitrogen fixation. Recently, new unicellular cyanobacteria that express nitrogenase were found in the open ocean and in coral reef lagoons. Furthermore, cyanobacteria are important in calcification and decalcification. All limestone surfaces have a layer of boring algae in which cyanobacteria often play a dominant role. Cyanobacterial symbioses are abundant in coral reefs; the most common hosts are sponges and ascidians. Cyanobacteria use tactics beyond space occupation to inhibit coral recruitment. Cyanobacteria can also form pathogenic microbial consortia in association with other microbes on living coral tissues, causing coral tissue lysis and death, and considerable declines in coral reefs. In deep lagoons, coccoid cyanobacteria are abundant and are grazed by ciliates, heteroflagellates, and the benthic coral reef community. Cyanobacteria produce metabolites that act as attractants for some species and deterrents for some grazers of the reef communities.

  11. Bottlenecks to coral recovery in the Seychelles

    Science.gov (United States)

    Chong-Seng, K. M.; Graham, N. A. J.; Pratchett, M. S.

    2014-06-01

    Processes that affect recovery of coral assemblages require investigation because coral reefs are experiencing a diverse array of more frequent disturbances. Potential bottlenecks to coral recovery include limited larval supply, low rates of settlement, and high mortality of new recruits or juvenile corals. We investigated spatial variation in local abundance of scleractinian corals in the Seychelles at three distinct life history stages (recruits, juveniles, and adults) on reefs with differing benthic conditions. Following widespread coral loss due to the 1998 bleaching event, some reefs are recovering (i.e., relatively high scleractinian coral cover: `coral-dominated'), some reefs have low cover of living macrobenthos and unconsolidated rubble substrates (`rubble-dominated'), and some reefs have high cover of macroalgae (`macroalgal-dominated'). Rates of coral recruitment to artificial settlement tiles were similar across all reef conditions, suggesting that larval supply does not explain differential coral recovery across the three reef types. However, acroporid recruits were absent on macroalgal-dominated reefs (0.0 ± 0.0 recruits tile-1) in comparison to coral-dominated reefs (5.2 ± 1.6 recruits tile-1). Juvenile coral colony density was significantly lower on macroalgal-dominated reefs (2.4 ± 1.1 colonies m-2), compared to coral-dominated reefs (16.8 ± 2.4 m-2) and rubble-dominated reefs (33.1 ± 7.3 m-2), suggesting that macroalgal-dominated reefs have either a bottleneck to successful settlement on the natural substrates or a high post-settlement mortality bottleneck. Rubble-dominated reefs had very low cover of adult corals (10.0 ± 1.7 %) compared to coral-dominated reefs (33.4 ± 3.6 %) despite no statistical difference in their juvenile coral densities. A bottleneck caused by low juvenile colony survivorship on unconsolidated rubble-dominated reefs is possible, or alternatively, recruitment to rubble-dominated reefs has only recently begun. This

  12. Bacteriological study and structural composition of staghorn stones removed by the anatrophic nephrolithotomic procedure

    Directory of Open Access Journals (Sweden)

    Hamid Shafi

    2013-01-01

    Full Text Available This study was conducted to determine the composition of staghorn stones and to assess the proportion of infected stones as well as the correlation between infection in the stones and bacteria grown in urine. Samples of 45 consecutive stones removed through anatrophic nephrolithotomic procedures were taken from the operation site and samples of urine were obtained by simultaneous bladder catheterization. The frequency of infection in the stones and correlation between infection of stone and urine samples were determined with respect to the composition of the stones. Twenty-two males and 23 females, with respective mean ages of 48.3 ± 15.6 years and 51 ± 7.4 years, were studied. The stone and urine cultures yielded positive results in ten and 16 patients, respectively, of a total of 45 patients (22.2% and 35.5%, respectively. Calcium oxalate was the main constituent of staghorn stones, seen in 31 patients (68.8%, uric acid in 12 patients (26.6% and struvite and/or calcium phosphate in 11 patients (24.4%. In seven of ten stones with bacterial growth, bacteria were isolated from urine cultures as well, which accounted for a concordance rate of 70%. The bacteria grown in the stone were the cause of urinary tract infection (UTI in 43.5% of the cases. Stone infection was significantly associated with UTI (OR = 6.47; 95% CI 1.43-31.7, P = 0.021 and presence of phosphate in the stones (OR = 18, 95% CI 3.28-99.6, P = 0.0006. E. coli was the most common bacteria grown from the stones, and was isolated in 50% of the cases; Ureaplasma urealyticum was the most common organism causing UTI, grown in 62.5% of the urine samples. There was a high concordance rate between bacteria in the stones and urine. These findings indicate that the urine culture can provide information for selection of an appropriate anti-microbial agent for stone sterilization. In addition, preventing re-growth or recurrence of stones and treatment of post-surgical infections would be

  13. High macroalgal cover and low coral recruitment undermines the potential resilience of the world's southernmost coral reef assemblages

    KAUST Repository

    Hoey, Andrew; Pratchett, Morgan S.; Cvitanovic, Christopher

    2011-01-01

    Coral reefs are under increasing pressure from anthropogenic and climate-induced stressors. The ability of reefs to reassemble and regenerate after disturbances (i.e., resilience) is largely dependent on the capacity of herbivores to prevent macroalgal expansion, and the replenishment of coral populations through larval recruitment. Currently there is a paucity of this information for higher latitude, subtropical reefs. To assess the potential resilience of the benthic reef assemblages of Lord Howe Island (31°32?S, 159°04?E), the worlds' southernmost coral reef, we quantified the benthic composition, densities of juvenile corals (as a proxy for coral recruitment), and herbivorous fish communities. Despite some variation among habitats and sites, benthic communities were dominated by live scleractinian corals (mean cover 37.4%) and fleshy macroalgae (20.9%). Live coral cover was higher than in most other subtropical reefs and directly comparable to lower latitude tropical reefs. Juvenile coral densities (0.8 ind.m -2), however, were 5-200 times lower than those reported for tropical reefs. Overall, macroalgal cover was negatively related to the cover of live coral and the density of juvenile corals, but displayed no relationship with herbivorous fish biomass. The biomass of herbivorous fishes was relatively low (204 kg.ha -1), and in marked contrast to tropical reefs was dominated by macroalgal browsing species (84.1%) with relatively few grazing species. Despite their extremely low biomass, grazing fishes were positively related to both the density of juvenile corals and the cover of bare substrata, suggesting that they may enhance the recruitment of corals through the provision of suitable settlement sites. Although Lord Howe Islands' reefs are currently coral-dominated, the high macroalgal cover, coupled with limited coral recruitment and low coral growth rates suggest these reefs may be extremely susceptible to future disturbances. © 2011 Hoey et al.

  14. High macroalgal cover and low coral recruitment undermines the potential resilience of the world's southernmost coral reef assemblages

    KAUST Repository

    Hoey, Andrew

    2011-10-03

    Coral reefs are under increasing pressure from anthropogenic and climate-induced stressors. The ability of reefs to reassemble and regenerate after disturbances (i.e., resilience) is largely dependent on the capacity of herbivores to prevent macroalgal expansion, and the replenishment of coral populations through larval recruitment. Currently there is a paucity of this information for higher latitude, subtropical reefs. To assess the potential resilience of the benthic reef assemblages of Lord Howe Island (31°32?S, 159°04?E), the worlds\\' southernmost coral reef, we quantified the benthic composition, densities of juvenile corals (as a proxy for coral recruitment), and herbivorous fish communities. Despite some variation among habitats and sites, benthic communities were dominated by live scleractinian corals (mean cover 37.4%) and fleshy macroalgae (20.9%). Live coral cover was higher than in most other subtropical reefs and directly comparable to lower latitude tropical reefs. Juvenile coral densities (0.8 ind.m -2), however, were 5-200 times lower than those reported for tropical reefs. Overall, macroalgal cover was negatively related to the cover of live coral and the density of juvenile corals, but displayed no relationship with herbivorous fish biomass. The biomass of herbivorous fishes was relatively low (204 kg.ha -1), and in marked contrast to tropical reefs was dominated by macroalgal browsing species (84.1%) with relatively few grazing species. Despite their extremely low biomass, grazing fishes were positively related to both the density of juvenile corals and the cover of bare substrata, suggesting that they may enhance the recruitment of corals through the provision of suitable settlement sites. Although Lord Howe Islands\\' reefs are currently coral-dominated, the high macroalgal cover, coupled with limited coral recruitment and low coral growth rates suggest these reefs may be extremely susceptible to future disturbances. © 2011 Hoey et al.

  15. High macroalgal cover and low coral recruitment undermines the potential resilience of the world's southernmost coral reef assemblages.

    Directory of Open Access Journals (Sweden)

    Andrew S Hoey

    Full Text Available Coral reefs are under increasing pressure from anthropogenic and climate-induced stressors. The ability of reefs to reassemble and regenerate after disturbances (i.e., resilience is largely dependent on the capacity of herbivores to prevent macroalgal expansion, and the replenishment of coral populations through larval recruitment. Currently there is a paucity of this information for higher latitude, subtropical reefs. To assess the potential resilience of the benthic reef assemblages of Lord Howe Island (31°32'S, 159°04'E, the worlds' southernmost coral reef, we quantified the benthic composition, densities of juvenile corals (as a proxy for coral recruitment, and herbivorous fish communities. Despite some variation among habitats and sites, benthic communities were dominated by live scleractinian corals (mean cover 37.4% and fleshy macroalgae (20.9%. Live coral cover was higher than in most other subtropical reefs and directly comparable to lower latitude tropical reefs. Juvenile coral densities (0.8 ind.m(-2, however, were 5-200 times lower than those reported for tropical reefs. Overall, macroalgal cover was negatively related to the cover of live coral and the density of juvenile corals, but displayed no relationship with herbivorous fish biomass. The biomass of herbivorous fishes was relatively low (204 kg.ha(-1, and in marked contrast to tropical reefs was dominated by macroalgal browsing species (84.1% with relatively few grazing species. Despite their extremely low biomass, grazing fishes were positively related to both the density of juvenile corals and the cover of bare substrata, suggesting that they may enhance the recruitment of corals through the provision of suitable settlement sites. Although Lord Howe Islands' reefs are currently coral-dominated, the high macroalgal cover, coupled with limited coral recruitment and low coral growth rates suggest these reefs may be extremely susceptible to future disturbances.

  16. Identification of Coral Reefs in Mamburit Waters, Sumenep Regency

    OpenAIRE

    Sawiya, Sawiya; Mahmudi, Mohammad; Guntur, Guntur

    2014-01-01

    This research was conducted in September to October 2013 in Mamburit Waters, Sumenep Regency. This study was aimed to assess the percentage of coral reefs and acknowkedge the type of the coral reefs. Coral reefs was observed with the Line Intercept (LIT) method laid parallel to the coastline in the depth of 3 m and 10 m in windward and leeward area. Total of 59.88% coral reefs lived in leeward area in 3 m depth includes in good category and the percentage of dead coral reefs and other fauna f...

  17. Temporal and taxonomic contrasts in coral growth at Davies Reef, central Great Barrier Reef, Australia

    Science.gov (United States)

    Anderson, Kristen D.; Cantin, Neal E.; Heron, Scott F.; Lough, Janice M.; Pratchett, Morgan S.

    2018-06-01

    Demographic processes, such as growth, can have an important influence on the population and community structure of reef-building corals. Importantly, ongoing changes in environmental conditions (e.g. ocean warming) are expected to affect coral growth, contributing to changes in the structure of coral populations and communities. This study quantified contemporary growth rates (linear extension and calcification) for the staghorn coral, Acropora muricata, at Davies Reef, central Great Barrier Reef, Australia. Growth rates were measured at three different depths (5, 10, and 15 m) over 2 yr (2012-2014) assessing both seasonal and inter-annual variability. Results of this study were compared to equivalent measurements made in 1980-1982 at the same location. To assist in understanding inter-annual variability in coral growth, we also examined annual growth bands from massive Porites providing continuous growth and records of flooding history for Davies Reef over the period 1979-2012. Linear extension rates of A. muricata were substantially (11-62%) lower in 2012-2014 compared to 1980-1982, especially at 10 and 15 m depths. These declines in growth coincide with a + 0.14 °C change in annual mean temperature. For massive Porites, however, calcification rates were highly variable among years and there was no discernible long-term change in growth despite sustained increases in temperature of 0.064 °C per decade. Apparent differences in the growth rates of Acropora between 1980-1982 and 2012-2014 may reflect inter-annual variation in coral growth (as seen for massive Porites), though it is known branching Acropora is much more sensitive to changing environmental conditions than massive corals. There are persistent issues in assessing the sensitivities of branching corals to environmental change due to limited capacity for retrospective analyses of growth, but given their disproportionate contribution to habitat complexity and reef structure, it is critical to ascertain

  18. Additive effects of the herbicide glyphosate and elevated temperature on the branched coral Acropora formosa in Nha Trang, Vietnam.

    Science.gov (United States)

    Amid, C; Olstedt, M; Gunnarsson, J S; Le Lan, H; Tran Thi Minh, H; Van den Brink, P J; Hellström, M; Tedengren, M

    2018-05-01

    The combined effects of the herbicide glyphosate and elevated temperature were studied on the tropical staghorn coral Acropora formosa, in Nha Trang bay, Vietnam. The corals were collected from two different reefs, one close to a polluted fish farm and one in a marine-protected area (MPA). In the laboratory, branches of the corals were exposed to the herbicide glyphosate at ambient (28 °C) and at 3 °C elevated water temperatures (31 °C). Effects of herbicide and elevated temperature were studied on coral bleaching using photography and digital image analysis (new colorimetric method developed here based on grayscale), chlorophyll a analysis, and symbiotic dinoflagellate (Symbiodinium, referred to as zooxanthellae) counts. All corals from the MPA started to bleach in the laboratory before they were exposed to the treatments, indicating that they were very sensitive, as opposed to the corals collected from the more polluted site, which were more tolerant and showed no bleaching response to temperature increase or herbicide alone. However, the combined exposure to the stressors resulted in significant loss of color, proportional to loss in chlorophyll a and zooxanthellae. The difference in sensitivity of the corals collected from the polluted site versus the MPA site could be explained by different symbiont types: the resilient type C3u and the stress-sensitive types C21 and C23, respectively. The additive effect of elevated temperatures and herbicides adds further weight to the notion that the bleaching of coral reefs is accelerated in the presence of multiple stressors. These results suggest that the corals in Nha Trang bay have adapted to the ongoing pollution to become more tolerant to anthropogenic stressors, and that multiple stressors hamper this resilience. The loss of color and decrease of chlorophyll a suggest that bleaching is related to concentration of chloro-pigments. The colorimetric method could be further fine-tuned and used as a precise, non

  19. Temporal Sampling of White Band Disease Infected Corals Reveals Complex and Dynamic Bacterial Communities

    Science.gov (United States)

    Gignoux-Wolfsohn, S.; Vollmer, S. V.; Aronson, F. M.

    2016-02-01

    White band disease (WBD) is a coral disease that is currently decimating populations of the endangered staghorn coral, Acropora cervicornis and elkhorn coral, A. palmata across the Caribbean. Since it was first reported in 1979, WBD has killed 95% of these critical reef-building Caribbean corals. WBD is infectious; it can be transmitted through the water column or by a corallivorous snail. While previous research shows that WBD is likely caused by bacteria, identification of a specific pathogen or pathogens has remained elusive. Much of the difficulty of understanding the etiology of the disease comes from a lack of information about how existing bacterial communities respond to disease and separating initial from secondary colonizers. In order to address this lack of information, we performed a fully-crossed tank infection experiment. We exposed healthy corals from two different sites to disease and healthy (control) homogenates from both sites, replicating genotype across tanks. We sampled every coral at three time points: before inoculation with the homogenate, after inoculation, and when the coral showed signs of disease. We then performed 16S rRNA gene sequencing on the Illumina HiSeq 2000. We saw significant differences between time points and disease state. Interestingly, at the first time point (time one) we observed differences between genotypes: every fragment from some genotypes was dominated by Endozoicomonas, while other genotypes were not dominated by one family. At time two we saw an increase in abundance of Alteromonadaceae and Flavobacteriaceae in all corals, and a larger increase in disease-exposed corals. At time three, we saw another increase in Flavobacteriaceae abundance in diseased corals, as well as an introduction of Francisella to diseased corals. While Flavobacteriaceae and Francisella were proposed as potential pathogens, their increase at time three suggests they may be secondary colonizers or opportunists. In genotypes that were

  20. Coral calcification and ocean acidification

    Science.gov (United States)

    Jokiel, Paul L.; Jury, Christopher P.; Kuffner, Ilsa B.

    2016-01-01

    Over 60 years ago, the discovery that light increased calcification in the coral plant-animal symbiosis triggered interest in explaining the phenomenon and understanding the mechanisms involved. Major findings along the way include the observation that carbon fixed by photosynthesis in the zooxanthellae is translocated to animal cells throughout the colony and that corals can therefore live as autotrophs in many situations. Recent research has focused on explaining the observed reduction in calcification rate with increasing ocean acidification (OA). Experiments have shown a direct correlation between declining ocean pH, declining aragonite saturation state (Ωarag), declining [CO32_] and coral calcification. Nearly all previous reports on OA identify Ωarag or its surrogate [CO32] as the factor driving coral calcification. However, the alternate “Proton Flux Hypothesis” stated that coral calcification is controlled by diffusion limitation of net H+ transport through the boundary layer in relation to availability of dissolved inorganic carbon (DIC). The “Two Compartment Proton Flux Model” expanded this explanation and synthesized diverse observations into a universal model that explains many paradoxes of coral metabolism, morphology and plasticity of growth form in addition to observed coral skeletal growth response to OA. It is now clear that irradiance is the main driver of net photosynthesis (Pnet), which in turn drives net calcification (Gnet), and alters pH in the bulk water surrounding the coral. Pnet controls [CO32] and thus Ωarag of the bulk water over the diel cycle. Changes in Ωarag and pH lag behind Gnet throughout the daily cycle by two or more hours. The flux rate Pnet, rather than concentration-based parameters (e.g., Ωarag, [CO3 2], pH and [DIC]:[H+] ratio) is the primary driver of Gnet. Daytime coral metabolism rapidly removes DIC from the bulk seawater. Photosynthesis increases the bulk seawater pH while providing the energy that drives

  1. Biology of corals and coral reefs

    Digital Repository Service at National Institute of Oceanography (India)

    Rajkumar, R.; Parulekar, A.H.

    on the systematic position is presented. The general structure is depicted with illustrations. Physiology part is updated to current knowledge on reproduction, nutrition and excretion of corals. The coral reefs section begins with status of world reefs...

  2. Coral, Fish and other data to inform staghorn coral recovery in the Caribbean Sea from 2012-04-05 to 2014-07-28 (NCEI Accession 0127933)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This project was funded for two years by CRCP (FY13-14) and built upon one year of pilot work conducted in FY12 funded by NMFS-SEFSC and SERO as an NRC postdoctoral...

  3. CORAL REEF BIOLOGICAL CRITERIA: USING THE CLEAN ...

    Science.gov (United States)

    Coral reefs are declining at unprecedented rates worldwide due to multiple interactive stressors including climate change and land-based sources of pollution. The Clean Water Act (CWA) can be a powerful legal instrument for protecting water resources, including the biological inhabitants of coral reefs. The objective of the CWA is to restore and maintain the chemical, physical and biological integrity of water resources. Coral reef protection and restoration under the Clean Water Act begins with water quality standards - provisions of state or Federal law that consist of a designated use(s) for the waters of the United States and water quality criteria sufficient to protect the uses. Aquatic life use is the designated use that is measured by biological criteria (biocriteria). Biocriteria are expectations set by a jurisdiction for the quality and quantity of living aquatic resources in a defined waterbody. Biocriteria are an important addition to existing management tools for coral reef ecosystems. The Technical Support Document “Coral Reef Biological Criteria: Using the Clean Water Act to Protect a National Treasure” will provide a framework to aid States and Territories in their development, adoption, and implementation of coral reef biocriteria in their respective water quality standards. The Technical Support Document “Coral Reef Biological Criteria: Using the Clean Water Act to Protect a National Treasure” will provide a framework for coral re

  4. Mesopredator trophodynamics on thermally stressed coral reefs

    Science.gov (United States)

    Hempson, Tessa N.; Graham, Nicholas A. J.; MacNeil, M. Aaron; Hoey, Andrew S.; Almany, Glenn R.

    2018-03-01

    Ecosystems are becoming vastly modified through disturbance. In coral reef ecosystems, the differential susceptibility of coral taxa to climate-driven bleaching is predicted to shift coral assemblages towards reefs with an increased relative abundance of taxa with high thermal tolerance. Many thermally tolerant coral species are characterised by low structural complexity, with reduced habitat niche space for the small-bodied coral reef fishes on which piscivorous mesopredators feed. This study used a patch reef array to investigate the potential impacts of climate-driven shifts in coral assemblages on the trophodynamics of reef mesopredators and their prey communities. The `tolerant' reef treatment consisted only of coral taxa of low susceptibility to bleaching, while `vulnerable' reefs included species of moderate to high thermal vulnerability. `Vulnerable' reefs had higher structural complexity, and the fish assemblages that established on these reefs over 18 months had higher species diversity, abundance and biomass than those on `tolerant' reefs. Fish assemblages on `tolerant' reefs were also more strongly influenced by the introduction of a mesopredator ( Cephalopholis boenak). Mesopredators on `tolerant' reefs had lower lipid content in their muscle tissue by the end of the 6-week experiment. Such sublethal energetic costs can compromise growth, fecundity, and survivorship, resulting in unexpected population declines in long-lived mesopredators. This study provides valuable insight into the altered trophodynamics of future coral reef ecosystems, highlighting the potentially increased vulnerability of reef fish assemblages to predation as reef structure declines, and the cost of changing prey availability on mesopredator condition.

  5. Preliminary results with a torsion microbalance indicate that carbon dioxide and exposed carbonic anhydrase in the organic matrix are the basis of calcification on the skeleton surface of living corals

    Directory of Open Access Journals (Sweden)

    Ian M Sandeman

    2012-03-01

    Full Text Available Ocean acidification is altering the calcification of corals, but the mechanism is still unclear. To explore what controls calcification, small pieces from the edges of thin plates of Agaricia agaricites were suspended from a torsion microbalance into gently stirred, temperaturecontrolled, seawater. Net calcification rates were monitored while light, temperature and pH were manipulated singly. The living coral pieces were sensitive to changes in conditions, especially light, and calcification was often suspended for one or two hours or overnight. The mean calcification rate increased from 0.06 in the dark to 0.10 mg.h-1.cm-2 (T test, n=8, p<0.01 in low light (15 μmol.s-1.m-2 and showed a positive linear relationship with temperature. With a reduction of mean pH from 8.2 to 7.6 the mean calcification rate in the light (65 μmol.s-1.m-2 increased from 0.19 to 0.28 mg.h-1.cm-2 (T test, n=8, p<0.05 indicating a dependency on carbon dioxide. After waterpiking and exposure of the skeletal surface/organic matrix to seawater, calcification showed an astonishing initial increase of more than an order of magnitude then decreased following a non-linear generalised Michaelis-Menten growth curve and reached a steady rate. Calcification rate of the freshly waterpiked coral was not influenced by light and was positively correlated with temperature. For a mean pH reduction from 8.1 to 7.6 the mean calcification rate increased from 0.18 to 0.32 mg.h-1.cm-2 (T test, n=11, p<0.02 again indicating a dependency on carbon dioxide. Calcification ceased in the presence of the carbonic anhydrase inhibitor azolamide. Staining confirmed the presence of carbonic anhydrase, particularly on the ridges of septae. After immersion of waterpiked corals in seawater for 48 hours weight gain and loss became linear and positively correlated to temperature. When the mean pH was reduced from 8.2 to 7.5 the mean rate of weight gain decreased from 0.25 to 0.13 mg.h-1.cm-2 (T test, n=6

  6. Bomb-cratered coral reefs in Puerto Rico, the untold story about a novel habitat: from reef destruction to community-based ecological rehabilitation

    Directory of Open Access Journals (Sweden)

    Edwin A. Hernández-Delgado

    2014-09-01

    Full Text Available Ecological impacts of military bombing activities in Puerto Rico have often been described as minimal, with recurrent allegations of confounding effects by hurricanes, coral diseases and local anthropogenic stressors. Reef craters, though isolated, are associated with major colony fragmentation and framework pulverization, with a net permanent loss of reef bio-construction. In contrast, adjacent non-bombarded reef sections have significantly higher benthic spatial relief and biodiversity. We compared benthic communities on 35-50 year-old bomb-cratered coral reefs at Culebra and Vieques Islands, with adjacent non-impacted sites; 2 coral recruit density and fish community structure within and outside craters; and 3 early effects of a rehabilitation effort using low-tech Staghorn coral Acropora cervicornis farming. Reef craters ranged in size from approximately 50 to 400m² and were largely dominated by heavily fragmented, flattened benthos, with coral cover usually below 2% and dominance by non-reef building taxa (i.e., filamentous algal turfs, macroalgae. Benthic spatial heterogeneity was lower within craters which also resulted in a lowered functional value as fish nursery ground. Fish species richness, abundance and biomass, and coral recruit density were lower within craters. Low-tech, community-based approaches to culture, harvest and transplant A. cervicornis into formerly bombarded grounds have proved successful in increasing percent coral cover, benthic spatial heterogeneity, and helping rehabilitate nursery ground functions.

  7. Standard percutaneous nephrolithotomy alone versus in combination with intraoperative anterograde flexible nephroscopy for staghorn stones: A retrospective study

    Directory of Open Access Journals (Sweden)

    Goksel Goktug

    2015-11-01

    Full Text Available This study aimed to compare the outcomes of standard percutaneous nephrolithotomy (PCNL to PCNL with intraoperative antegrade flexible nephroscopy (IAFN for treating stones of staghorn nature. We retrospectively analyzed patients treated using PCNL between January 2007 and July 2013. A total of 1250 patients were treated using PCNL, and 166 patients had staghorn stones. All patients had been subjected to a complete blood count, routine biochemical analyses, coagulation tests, a complete urine analysis, and urine cultures. Patients with a positive urine culture had been treated with appropriate antibiotics until the urine culture became negative. After purchasing a flexible renoscope in March 2012, we routinely used this tool to improve the stone-free (SF rate. The 105 patients who underwent standard PCNL prior to March 2012 were classified as Group 1, and the 61 patients who underwent PCNL + IAFN after that date were classified as Group 2. The two groups had similar and homogeneous demographic data. The fluoroscopy and total operative times were significantly higher in Group 2 than in Group 1 (p < 0.01. Additionally, the hospitalization time (p < 0.01 and the mean hematocrit decrease (p < 0.01 were significantly lower in Group 1. In both groups, the SF rates were higher than 85%, similar to those reported in the literature. Although Group 2 had a slightly better SF rates, this difference was not statistically significant. For staghorn calculi, PCNL combined with IAFN yields excellent outcomes. However, similar prospective studies on larger cohorts should be performed to support our findings.

  8. Genomic variation among populations of threatened coral: Acropora cervicornis.

    Science.gov (United States)

    Drury, C; Dale, K E; Panlilio, J M; Miller, S V; Lirman, D; Larson, E A; Bartels, E; Crawford, D L; Oleksiak, M F

    2016-04-13

    Acropora cervicornis, a threatened, keystone reef-building coral has undergone severe declines (>90 %) throughout the Caribbean. These declines could reduce genetic variation and thus hamper the species' ability to adapt. Active restoration strategies are a common conservation approach to mitigate species' declines and require genetic data on surviving populations to efficiently respond to declines while maintaining the genetic diversity needed to adapt to changing conditions. To evaluate active restoration strategies for the staghorn coral, the genetic diversity of A. cervicornis within and among populations was assessed in 77 individuals collected from 68 locations along the Florida Reef Tract (FRT) and in the Dominican Republic. Genotyping by Sequencing (GBS) identified 4,764 single nucleotide polymorphisms (SNPs). Pairwise nucleotide differences (π) within a population are large (~37 %) and similar to π across all individuals. This high level of genetic diversity along the FRT is similar to the diversity within a small, isolated reef. Much of the genetic diversity (>90 %) exists within a population, yet GBS analysis shows significant variation along the FRT, including 300 SNPs with significant FST values and significant divergence relative to distance. There are also significant differences in SNP allele frequencies over small spatial scales, exemplified by the large FST values among corals collected within Miami-Dade county. Large standing diversity was found within each population even after recent declines in abundance, including significant, potentially adaptive divergence over short distances. The data here inform conservation and management actions by uncovering population structure and high levels of diversity maintained within coral collections among sites previously shown to have little genetic divergence. More broadly, this approach demonstrates the power of GBS to resolve differences among individuals and identify subtle genetic structure

  9. Linking Wave Forcing to Coral Cover and Structural Complexity Across Coral Reef Flats

    Science.gov (United States)

    Harris, D. L.; Rovere, A.; Parravicini, V.; Casella, E.

    2015-12-01

    The hydrodynamic regime is a significant component in the geomorphic and ecological development of coral reefs. The energy gradients and flow conditions generated by the breaking and transformation of waves across coral reef crests and flats drive changes in geomorphic structure, and coral growth form and distribution. One of the key aspects in regulating the wave energy propagating across reef flats is the rugosity or roughness of the benthic substrate. Rugosity and structural complexity of coral reefs is also a key indicator of species diversity, ecological functioning, and reef health. However, the links between reef rugosity, coral species distribution and abundance, and hydrodynamic forcing are poorly understood. In this study we examine this relationship by using high resolution measurement of waves in the surf zone and coral reef benthic structure.Pressure transducers (logging at 4 Hz) were deployed in cross reef transects at two sites (Tiahura and Ha'apiti reef systems) in Moorea, French Polynesia with wave characteristics determined on a wave by wave basis. A one dimensional hydrodynamic model (XBeach) was calibrated from this data to determine wave processes on the reef flats under average conditions. Transects of the reef benthic structure were conducted using photographic analysis and the three dimensional reef surface was constructed using structure from motion procedures. From this analysis reef rugosity, changes in coral genus and growth form, and across reef shifts in benthic community were determined. The results show clear changes in benthic assemblages along wave energy gradients with some indication of threshold values of wave induced bed shear stress above which live coral cover was reduced. Reef rugosity was shown to be significantly along the cross-reef transect which has important implications for accurate assessment of wave dissipation across coral reef flats. Links between reef rugosity and coral genus were also observed and may indicate

  10. Food habits of Arctic staghorn sculpin (Gymnocanthus tricuspis) and shorthorn sculpin (Myoxocephalus scorpius) in the northeastern Chukchi and western Beaufort Seas

    Science.gov (United States)

    Gray, Benjamin P.; Norcross, Brenda L.; Beaudreau, Anne H.; Blanchard, Arny L.; Seitz, Andrew C.

    2017-01-01

    Arctic staghorn sculpin (Gymnocanthus tricuspis) and shorthorn sculpin (Myoxocephalus scorpius) belong to Cottidae, the second most abundant fish family in the western Arctic. Although considered important in food webs, little is known about their food habits throughout this region. To address this knowledge gap, we examined and compared the diets of 515 Arctic staghorn sculpin and 422 shorthorn sculpin using stomachs collected over three summers in the northeastern Chukchi Sea (2010-2012) and one summer in the western Beaufort Sea (2011). We used permutational multivariate analysis of variance (PERMANOVA) and non-metric multidimensional scaling (nMDS) to compare sculpin diets between regions and selected size classes. Differences in mouth morphologies and predator size versus prey size relationships were examined using regression techniques. Arctic staghorn sculpin and shorthorn sculpin diet compositions differed greatly throughout the Chukchi and Beaufort Seas. Regardless of body size, the smaller-mouthed Arctic staghorn sculpin consumed mostly benthic amphipods and polychaetes, whereas the larger-mouthed shorthorn sculpin shifted from a diet composed of benthic and pelagic macroinvertebrates as smaller individuals to shrimps and fish prey as larger individuals. Within shared habitats, the sculpins appear to partition prey, either by taxa or size, in a manner that suggests no substantial overlap occurs between species. This study increases knowledge of sculpin feeding ecology in the western Arctic and offers regional, quantitative diet information that could support current and future food web modeling efforts.

  11. Differential sensitivity of coral larvae to natural levels of ultraviolet radiation during the onset of larval competence.

    KAUST Repository

    Aranda, Manuel; Banaszak, Anastazia T; Bayer, Till; Luyten, James; Medina, Mó nica; Voolstra, Christian R.

    2011-01-01

    Scleractinian corals are the major builders of the complex structural framework of coral reefs. They live in tropical waters around the globe where they are frequently exposed to potentially harmful ultraviolet radiation (UVR). The eggs and early

  12. Comparative genomics explains the evolutionary success of reef-forming corals

    OpenAIRE

    Bhattacharya, Debashish; Agrawal, Shobhit; Aranda, Manuel; Baumgarten, Sebastian; Belcaid, Mahdi; Drake, Jeana L; Erwin, Douglas; Foret, Sylvian; Gates, Ruth D; Gruber, David F; Kamel, Bishoy; Lesser, Michael P; Levy, Oren; Liew, Yi Jin; MacManes, Matthew

    2016-01-01

    eLife digest For millions of years, reef-building stony corals have created extensive habitats for numerous marine plants and animals in shallow tropical seas. Stony corals consist of many small, tentacled animals called polyps. These polyps secrete a mineral called aragonite to create the reef ? an external ?skeleton? that supports and protects the corals. Photosynthesizing algae live inside the cells of stony corals, and each species depends on the other to survive. The algae produce the co...

  13. Biological impacts of oil pollution: coral reefs. V. 3

    International Nuclear Information System (INIS)

    1997-01-01

    Coral reefs are the largest structures made by living things and exist as extremely productive ecosystems in tropical and sub-tropical areas of the world. Their location in nearshore waters means that there is a potential danger to corals from tanker accidents, refinery operations, oil exploration and production. There are now a number of published scientific papers concerning the effects of oils on corals, but results are not entirely consistent. This report summarizes and interprets the findings, and provides background information on the structure and ecology of coral reefs. Clean-up options and their implications are discussed in the light of the latest evidence from case histories and field experiments. (UK)

  14. Conservation genetics and the resilience of reef-building corals.

    Science.gov (United States)

    van Oppen, Madeleine J H; Gates, Ruth D

    2006-11-01

    Coral reefs have suffered long-term decline due to a range of anthropogenic disturbances and are now also under threat from climate change. For appropriate management of these vulnerable and valuable ecosystems it is important to understand the factors and processes that determine their resilience and that of the organisms inhabiting them, as well as those that have led to existing patterns of coral reef biodiversity. The scleractinian (stony) corals deposit the structural framework that supports and promotes the maintenance of biological diversity and complexity of coral reefs, and as such, are major components of these ecosystems. The success of reef-building corals is related to their obligate symbiotic association with dinoflagellates of the genus Symbiodinium. These one-celled algal symbionts (zooxanthellae) live in the endodermal tissues of their coral host, provide most of the host's energy budget and promote rapid calcification. Furthermore, zooxanthellae are the main primary producers on coral reefs due to the oligotrophic nature of the surrounding waters. In this review paper, we summarize and critically evaluate studies that have employed genetics and/or molecular biology in examining questions relating to the evolution and ecology of reef-building corals and their algal endosymbionts, and that bear relevance to coral reef conservation. We discuss how these studies can focus future efforts, and examine how these approaches enhance our understanding of the resilience of reef-building corals.

  15. A comparison of proxy performance in coral biodiversity monitoring

    Science.gov (United States)

    Richards, Zoe T.

    2013-03-01

    The productivity and health of coral reef habitat is diminishing worldwide; however, the effect that habitat declines have on coral reef biodiversity is not known. Logistical and financial constraints mean that surveys of hard coral communities rarely collect data at the species level; hence it is important to know if there are proxy metrics that can reliably predict biodiversity. Here, the performances of six proxy metrics are compared using regression analyses on survey data from a location in the northern Great Barrier Reef. Results suggest generic richness is a strong explanatory variable for spatial patterns in species richness (explaining 82 % of the variation when measured on a belt transect). The most commonly used metric of reef health, percentage live coral cover, is not positively or linearly related to hard coral species richness. This result raises doubt as to whether management actions based on such reefscape information will be effective for the conservation of coral biodiversity.

  16. Coral reefs - Specialized ecosystems

    Digital Repository Service at National Institute of Oceanography (India)

    Wafar, M.V.M.

    This paper discusses briefly some aspects that characterize and differentiate coral reef ecosystems from other tropical marine ecosystems. A brief account on the resources that are extractable from coral reefs, their susceptibility to natural...

  17. Habitat associations of juvenile fish at Ningaloo Reef, Western Australia: the importance of coral and algae.

    Directory of Open Access Journals (Sweden)

    Shaun K Wilson

    2010-12-01

    Full Text Available Habitat specificity plays a pivotal role in forming community patterns in coral reef fishes, yet considerable uncertainty remains as to the extent of this selectivity, particularly among newly settled recruits. Here we quantified habitat specificity of juvenile coral reef fish at three ecological levels; algal meadows vs. coral reefs, live vs. dead coral and among different coral morphologies. In total, 6979 individuals from 11 families and 56 species were censused along Ningaloo Reef, Western Australia. Juvenile fishes exhibited divergence in habitat use and specialization among species and at all study scales. Despite the close proximity of coral reef and algal meadows (10's of metres 25 species were unique to coral reef habitats, and seven to algal meadows. Of the seven unique to algal meadows, several species are known to occupy coral reef habitat as adults, suggesting possible ontogenetic shifts in habitat use. Selectivity between live and dead coral was found to be species-specific. In particular, juvenile scarids were found predominantly on the skeletons of dead coral whereas many damsel and butterfly fishes were closely associated with live coral habitat. Among the coral dependent species, coral morphology played a key role in juvenile distribution. Corymbose corals supported a disproportionate number of coral species and individuals relative to their availability, whereas less complex shapes (i.e. massive & encrusting were rarely used by juvenile fish. Habitat specialisation by juvenile species of ecological and fisheries importance, for a variety of habitat types, argues strongly for the careful conservation and management of multiple habitat types within marine parks, and indicates that the current emphasis on planning conservation using representative habitat areas is warranted. Furthermore, the close association of many juvenile fish with corals susceptible to climate change related disturbances suggests that identifying and

  18. Metabolite Profiling of Red Sea Corals

    KAUST Repository

    Ortega, Jovhana Alejandra

    2016-12-01

    Looking at the metabolite profile of an organism provides insights into the metabolomic state of a cell and hence also into pathways employed. Little is known about the metabolites produced by corals and their algal symbionts. In particular, corals from the central Red Sea are understudied, but interesting study objects, as they live in one of the warmest and most saline environments and can provide clues as to the adjustment of corals to environmental change. In this study, we applied gas chromatography – mass spectrometry (GC–MS) metabolite profiling to analyze the metabolic profile of four coral species and their associated symbionts: Fungia granulosa, Acropora hemprichii, Porites lutea, and Pocillopora verrucosa. We identified and quantified 102 compounds among primary and secondary metabolites across all samples. F. granulosa and its symbiont showed a total of 59 metabolites which were similar to the 51 displayed by P. verrucosa. P. lutea and A. hemprichii both harbored 40 compounds in conjunction with their respective isolated algae. Comparing across species, 28 metabolites were exclusively present in algae, while 38 were exclusive to corals. A principal component and cluster analyses revealed that metabolite profiles clustered between corals and algae, but each species harbored a distinct catalog of metabolites. The major classes of compounds were carbohydrates and amino acids. Taken together, this study provides a first description of metabolites of Red Sea corals and their associated symbionts. As expected, the metabolites of coral hosts differ from their algal symbionts, but each host and algal species harbor a unique set of metabolites. This corroborates that host-symbiont species pairs display a fine-tuned complementary metabolism that provide insights into the specific nature of the symbiosis. Our analysis also revealed aquatic pollutants, which suggests that metabolite profiling might be used for monitoring pollution levels and assessing

  19. Corals diseases are a major cause of coral death

    Science.gov (United States)

    Corals, like humans, are susceptible to diseases. Some coral diseases are associated with pathogenic bacteria; however, the causes of most remain unknown. Some diseases trigger rapid and extensive mortality, while others slowly cause localized color changes or injure coral tiss...

  20. Low coral cover in a high-CO2 world

    Science.gov (United States)

    Hoegh-Guldberg, Ove

    2005-09-01

    Coral reefs generally exist within a relatively narrow band of temperatures, light, and seawater aragonite saturation states. The growth of coral reefs is minimal or nonexistent outside this envelope. Climate change, through its effect on ocean temperature, has already had an impact on the world's coral reefs, with almost 30% of corals having disappeared since the beginning of the 1980s. Abnormally warm temperatures cause corals to bleach (lose their brown dinoflagellate symbionts) and, if elevated for long enough, to die. Increasing atmospheric CO2 is also potentially affecting coral reefs by lowering the aragonite saturation state of seawater, making carbonate ions less available for calcification. The synergistic interaction of elevated temperature and CO2 is likely to produce major changes to coral reefs over the next few decades and centuries. Known tolerances of corals to projected changes to sea temperatures indicate that corals are unlikely to remain abundant on reefs and could be rare by the middle of this century if the atmospheric CO2 concentration doubles or triples. The combination of changes to sea temperature and carbonate ion availability could trigger large-scale changes in the biodiversity and function of coral reefs. The ramifications of these changes for the hundred of millions of coral reef-dependent people and industries living in a high-CO2 world have yet to be properly defined. The weight of evidence suggests, however, that projected changes will cause major shifts in the prospects for industries and societies that depend on having healthy coral reefs along their coastlines.

  1. Recent disturbances augment community shifts in coral assemblages in Moorea, French Polynesia

    KAUST Repository

    Pratchett, Morgan S.; Trapon, Melanie L.; Berumen, Michael L.; Chong-Seng, Karen M.

    2010-01-01

    Coral reefs are often subject to disturbances that can cause enduring changes in community structure and abundance of coral reef organisms. In Moorea, French Polynesia, frequent disturbances between 1979 and 2003 caused marked shifts in taxonomic composition of coral assemblages. This study explores recent changes in live cover and taxonomic structure of coral communities on the north coast of Moorea, French Polynesia, to assess whether coral assemblages are recovering (returning to a previous Acropora-dominated state) or continuing to move towards an alternative community structure. Coral cover declined by 29.7% between July 2003 and March 2009, mostly due to loss of Acropora and Montipora spp. Coral mortality varied among habitats, with highest levels of coral loss on the outer reef slope (7-20 m depth). In contrast, there was limited change in coral cover within the lagoon, and coral cover actually increased on the reef crest. Observed changes in coral cover and composition correspond closely with the known feeding preferences and observed spatial patterns of Acanthaster planci L., though observed coral loss also coincided with at least one episode of coral bleaching, as well as persistent populations of the corallivorous starfish Culcita novaeguineae Muller & Troschel. While climate change poses an important and significant threat to the future structure and dynamics coral reef communities, outbreaks of A. planci remain a significant cause of coral loss in Moorea. More importantly, these recent disturbances have followed long-term shifts in the structure of coral assemblages, and the relative abundance of both Pocillopora and Porites continue to increase due to disproportionate losses of Acropora and Montipora. Moreover, Pocillopora and Porites dominate assemblages of juvenile corals, suggesting that there is limited potential for a return to an Acropora-dominated state, last recorded in 1979. © 2010 Springer-Verlag.

  2. Recent disturbances augment community shifts in coral assemblages in Moorea, French Polynesia

    KAUST Repository

    Pratchett, Morgan S.

    2010-09-19

    Coral reefs are often subject to disturbances that can cause enduring changes in community structure and abundance of coral reef organisms. In Moorea, French Polynesia, frequent disturbances between 1979 and 2003 caused marked shifts in taxonomic composition of coral assemblages. This study explores recent changes in live cover and taxonomic structure of coral communities on the north coast of Moorea, French Polynesia, to assess whether coral assemblages are recovering (returning to a previous Acropora-dominated state) or continuing to move towards an alternative community structure. Coral cover declined by 29.7% between July 2003 and March 2009, mostly due to loss of Acropora and Montipora spp. Coral mortality varied among habitats, with highest levels of coral loss on the outer reef slope (7-20 m depth). In contrast, there was limited change in coral cover within the lagoon, and coral cover actually increased on the reef crest. Observed changes in coral cover and composition correspond closely with the known feeding preferences and observed spatial patterns of Acanthaster planci L., though observed coral loss also coincided with at least one episode of coral bleaching, as well as persistent populations of the corallivorous starfish Culcita novaeguineae Muller & Troschel. While climate change poses an important and significant threat to the future structure and dynamics coral reef communities, outbreaks of A. planci remain a significant cause of coral loss in Moorea. More importantly, these recent disturbances have followed long-term shifts in the structure of coral assemblages, and the relative abundance of both Pocillopora and Porites continue to increase due to disproportionate losses of Acropora and Montipora. Moreover, Pocillopora and Porites dominate assemblages of juvenile corals, suggesting that there is limited potential for a return to an Acropora-dominated state, last recorded in 1979. © 2010 Springer-Verlag.

  3. Species profiles: Life histories and environmental requirements of coastal fishes and invertebrates (south Florida): Reef-building corals. [Acropora cervicornis; Acropora palmata; Montastraea annularis; Montastraea cavernosa

    Energy Technology Data Exchange (ETDEWEB)

    Porter, J.W.

    1987-08-01

    Four species of reef-building corals are considered: elkhorn coral, staghorn coral, common star coral, and large star coral. All four species spawn annually in the fall during hurricane season. Juvenile recruitment is low in all four species. Rapid growth rates of species in the genus Acropora (10 to 20 cm/yr) contrast with slower growth rates of species in the genus Montastraea (1.0 to 2.0 cm/yr), but both species of Montastraea are also important in reef development due to their form and great longevity. Shallow-water colonies of Montastraea survive hurricanes; shallow colonies of Acropora do not. Because of their dependence on photosynthesis for all of their carbon acquisition, the Acropora species reviewed here have a more restricted depth distribution (0 to 30 m) than do the Montastraea species considered (0 to 70 m). All four species are subject to intense predation by the snail predator, Coralliophila. Species of Montastraea are susceptible to infection from blue-green algae, which produce ''black band disease;'' species of Acropora are susceptible to a different, as yet unidentified pathogen, that produces ''white-band'' disease. Increased water turbidity and sedimentation cause reduced growth rates and partial or whole mortality in all four species.

  4. Symbiotic Dinoflagellate Functional Diversity Mediates Coral Survival under Ecological Crisis.

    Science.gov (United States)

    Suggett, David J; Warner, Mark E; Leggat, William

    2017-10-01

    Coral reefs have entered an era of 'ecological crisis' as climate change drives catastrophic reef loss worldwide. Coral growth and stress susceptibility are regulated by their endosymbiotic dinoflagellates (genus Symbiodinium). The phylogenetic diversity of Symbiodinium frequently corresponds to patterns of coral health and survival, but knowledge of functional diversity is ultimately necessary to reconcile broader ecological success over space and time. We explore here functional traits underpinning the complex biology of Symbiodinium that spans free-living algae to coral endosymbionts. In doing so we propose a mechanistic framework integrating the primary traits of resource acquisition and utilisation as a means to explain Symbiodinium functional diversity and to resolve the role of Symbiodinium in driving the stability of coral reefs under an uncertain future. Copyright © 2017 Elsevier Ltd. All rights reserved.

  5. Coral reefs and eutrophication

    International Nuclear Information System (INIS)

    Stambler, N.

    1999-01-01

    Coral reefs are found in oligotrophic waters, which are poor in nutrients such as nitrogen, phosphate, and possibly iron. In spite of this, coral reefs exhibit high gross primary productivity rates. They thrive in oligotrophic conditions because of the symbiotic relationship between corals and dinoflagellate algae (zooxanthellae) embedded in the coral tissue. In their mutualistic symbiosis, the zooxanthellae contribute their photosynthetic capability as the basis for the metabolic energy of the whole association, and eventually of a great part of the entire reef ecosystem

  6. Transcriptomes and expression profiling of deep-sea corals from the Red Sea provide insight into the biology of azooxanthellate corals

    OpenAIRE

    Yum, L. K.; Baumgarten, S.; Röthig, T.; Roder, C.; Roik, Anna; Michell, C.; Voolstra, C. R.

    2017-01-01

    Despite the importance of deep-sea corals, our current understanding of their ecology and evolution is limited due to difficulties in sampling and studying deep-sea environments. Moreover, a recent re-evaluation of habitat limitations has been suggested after characterization of deep-sea corals in the Red Sea, where they live at temperatures of above 20??C at low oxygen concentrations. To gain further insight into the biology of deep-sea corals, we produced reference transcriptomes and studie...

  7. Benthic data for corals, macroalgae, invertebrates, and non-living bottom types from Fagatele Bay National Marine Sanctuary, South Pacific Ocean, 2007-04-02 to 2008-12-31 (NODC Accession 0068364)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Benthic transects were repeated at 12 sites around Tutuila at various depths on the reef slopes and flats. Benthic coverage categories include coral species,...

  8. Global warming and coral reefs

    Digital Repository Service at National Institute of Oceanography (India)

    Wafar, M.V.M.

    , notably at Ratnagiri. Malwan. Redi Port and Vizhingam. Relic reefs with living herm<:ltypic corals at depths ranging fror:l 25 to 45m are the Gaves hani Bank off~\\angalore,and the submerged banks (Bass<:ls de Pedro. Sesostris Bank and Cora Divh... the snore (Qaslm and Wafar, 1979). The other representative Sea le\\lel Variation 417 of the extensive reelS of the outer shelf that survived Pleistocene drowning is the Gaveshani Bank, fanhc: south (J 3° 24' N; 73° 45' E), about 100 km off \\1 ar:ga lore...

  9. Physiological and biochemical performances of menthol-induced aposymbiotic corals.

    Directory of Open Access Journals (Sweden)

    Jih-Terng Wang

    Full Text Available The unique mutualism between corals and their photosynthetic zooxanthellae (Symbiodinium spp. is the driving force behind functional assemblages of coral reefs. However, the respective roles of hosts and Symbiodinium in this endosymbiotic association, particularly in response to environmental challenges (e.g., high sea surface temperatures, remain unsettled. One of the key obstacles is to produce and maintain aposymbiotic coral hosts for experimental purposes. In this study, a simple and gentle protocol to generate aposymbiotic coral hosts (Isopora palifera and Stylophora pistillata was developed using repeated incubation in menthol/artificial seawater (ASW medium under light and in ASW in darkness, which depleted more than 99% of Symbiodinium from the host within 4∼8 days. As indicated by the respiration rate, energy metabolism (by malate dehydrogenase activity, and nitrogen metabolism (by glutamate dehydrogenase activity and profiles of free amino acids, the physiological and biochemical performances of the menthol-induced aposymbiotic corals were comparable to their symbiotic counterparts without nutrient supplementation (e.g., for Stylophora or with a nutrient supplement containing glycerol, vitamins, and a host mimic of free amino acid mixture (e.g., for Isopora. Differences in biochemical responses to menthol-induced bleaching between Stylophora and Isopora were attributed to the former digesting Symbiodinium rather than expelling the algae live as found in the latter species. Our studies showed that menthol could successfully bleach corals and provided aposymbiotic corals for further exploration of coral-alga symbioses.

  10. Cryobiology of coral fragments.

    Science.gov (United States)

    Hagedorn, Mary; Farrell, Ann; Carter, Virginia L

    2013-02-01

    Around the world, coral reefs are dying due to human influences, and saving habitat alone may not stop this destruction. This investigation focused on the biological processes that will provide the first steps in understanding the cryobiology of whole coral fragments. Coral fragments are a partnership of coral tissue and endosymbiotic algae, Symbiodinium sp., commonly called zooxanthellae. These data reflected their separate sensitivities to chilling and a cryoprotectant (dimethyl sulfoxide) for the coral Pocillopora damicornis, as measured by tissue loss and Pulse Amplitude Modulated fluorometry 3weeks post-treatment. Five cryoprotectant treatments maintained the viability of the coral tissue and zooxanthellae at control values (1M dimethyl sulfoxide at 1.0, 1.5 and 2.0h exposures, and 1.5M dimethyl sulfoxide at 1.0 and 1.5h exposures, P>0.05, ANOVA), whereas 2M concentrations did not (Pzooxanthellae. During the winter when the fragments were chilled, the coral tissue remained relatively intact (∼25% loss) post-treatment, but the zooxanthellae numbers in the tissue declined after 5min of chilling (Pzooxanthellae numbers declined in response to chilling alone (P0.05, ANOVA), but it did not protect against the loss of zooxanthellae (Pzooxanthellae are the most sensitive element in the coral fragment complex and future cryopreservation protocols must be guided by their greater sensitivity. Copyright © 2012 Elsevier Inc. All rights reserved.

  11. Coral recovery may not herald the return of fishes on damaged coral reefs

    KAUST Repository

    Bellwood, David R.; Baird, Andrew Hamilton; Depczynski, Martial R.; Gonzá lez-Cabello, Alonso; Hoey, Andrew; Lefé vre, Carine D.; Tanner, Jennifer K.

    2012-01-01

    The dynamic nature of coral reefs offers a rare opportunity to examine the response of ecosystems to disruption due to climate change. In 1998, the Great Barrier Reef experienced widespread coral bleaching and mortality. As a result, cryptobenthic fish assemblages underwent a dramatic phase-shift. Thirteen years, and up to 96 fish generations later, the cryptobenthic fish assemblage has not returned to its pre-bleach configuration. This is despite coral abundances returning to, or exceeding, pre-bleach values. The post-bleach fish assemblage exhibits no evidence of recovery. If these short-lived fish species are a model for their longer-lived counterparts, they suggest that (1) the full effects of the 1998 bleaching event on long-lived fish populations have yet to be seen, (2) it may take decades, or more, before recovery or regeneration of these long-lived species will begin, and (3) fish assemblages may not recover to their previous composition despite the return of corals. © 2012 Springer-Verlag.

  12. Coral recovery may not herald the return of fishes on damaged coral reefs

    KAUST Repository

    Bellwood, David R.

    2012-03-25

    The dynamic nature of coral reefs offers a rare opportunity to examine the response of ecosystems to disruption due to climate change. In 1998, the Great Barrier Reef experienced widespread coral bleaching and mortality. As a result, cryptobenthic fish assemblages underwent a dramatic phase-shift. Thirteen years, and up to 96 fish generations later, the cryptobenthic fish assemblage has not returned to its pre-bleach configuration. This is despite coral abundances returning to, or exceeding, pre-bleach values. The post-bleach fish assemblage exhibits no evidence of recovery. If these short-lived fish species are a model for their longer-lived counterparts, they suggest that (1) the full effects of the 1998 bleaching event on long-lived fish populations have yet to be seen, (2) it may take decades, or more, before recovery or regeneration of these long-lived species will begin, and (3) fish assemblages may not recover to their previous composition despite the return of corals. © 2012 Springer-Verlag.

  13. Responses of Cryptofaunal Species Richness and Trophic Potential to Coral Reef Habitat Degradation

    Directory of Open Access Journals (Sweden)

    Derek P. Manzello

    2012-02-01

    Full Text Available Coral reefs are declining worldwide as a result of many anthropogenic disturbances. This trend is alarming because coral reefs are hotspots of marine biodiversity and considered the ‘rainforests of the sea. As in the rainforest, much of the diversity on a coral reef is cryptic, remaining hidden among the cracks and crevices of structural taxa. Although the cryptofauna make up the majority of a reef’s metazoan biodiversity, we know little about their basic ecology or how these communities respond to reef degradation. Emerging research shows that the species richness of the motile cryptofauna is higher among dead (framework vs. live coral substrates and, surprisingly, increases within successively more eroded reef framework structures, ultimately reaching a maximum in dead coral rubble. Consequently, the paradigm that abundant live coral is the apex of reef diversity needs to be clarified. This provides guarded optimism amidst alarming reports of declines in live coral cover and the impending doom of coral reefs, as motile cryptic biodiversity should persist independent of live coral cover. Granted, the maintenance of this high species richness is contingent on the presence of reef rubble, which will eventually be lost due to physical, chemical, and biological erosion if not replenished by live coral calcification and mortality. The trophic potential of a reef, as inferred from the abundance of cryptic organisms, is highest on live coral. Among dead framework substrates, however, the density of cryptofauna reaches a peak at intermediate levels of degradation. In summary, the response of the motile cryptofauna, and thus a large fraction of the reef’s biodiversity, to reef degradation is more complex and nuanced than currently thought; such that species richness may be less sensitive than overall trophic function.

  14. Indirect benefits of high coral cover for non-corallivorous butterflyfishes

    KAUST Repository

    Pratchett, Morgan S.

    2014-12-23

    Extensive coral loss often leads to pronounced declines in the abundance of fishes, which are not necessarily limited to those fishes that are directly reliant on live coral for food or shelter. This study explored changes in the abundance of two non-corallivorous butterflyfish, Chaetadon auriga and Chaetodon vagabundus, during declines in coral cover at Lizard Island, northern Great Barrier Reef, caused by localised outbreaks of crown-of-thorns starfish (COTS). At North Reef, where COTS caused significant coral depletion, the abundance of C. auriga declined from 1995–1996 to 1997–1999, whereas abundance was unchanged at Washing Machine Reef, which was relatively unaffected by COTS. Abundance of C. vagabundus did not vary through the course of this study at either site. To better understand inter-specific differences in the responses of non-corallivorous butterflyfishes, feeding rates of C. auriga and C. vagabundus were quantified across sites with varying coral cover. Feeding rates of C. auriga were significantly and positively correlated with live coral cover. In contrast, feeding rates of C. vagabundus did not differ among sites with varying levels of live coral cover. This study shows that C. auriga is negatively affected by localised coral depletion, possibly because its prey is more abundant in coral-rich habitats. C. vagabundus, meanwhile, is generally unaffected by changes in coral cover. This study stresses the need for more detailed research in light of current and predicted declines in coral cover to elucidate specific differences in the dietary composition of C. auriga versus C. vagabundus, and the extent to which their prey is actually reliant on live coral.

  15. Species and size diversity in protective services offered by coral guard-crabs

    Directory of Open Access Journals (Sweden)

    C. Seabird McKeon

    2014-09-01

    Full Text Available Coral guard-crabs in the genus Trapezia are well-documented defenders of their pocilloporid coral hosts against coral predators such as the Crown-of-Thorns seastar (Acanthaster planci complex. The objectives of this study were to examine the protective services of six species of Trapezia against corallivory, and the extent of functional diversity among these Trapezia species.Studies conducted in Mo’orea, French Polynesia showed the Trapezia—coral mutualism protected the host corals from multiple predators through functional diversity in the assemblage of crab symbionts. Species differed in their defensive efficacy, but species within similar size classes shared similar abilities. Smaller-size Trapezia species, which were previously thought to be ineffective guards, play important defensive roles against small corallivores.We also measured the benefits of this mutualism to corals in the midst of an Acanthaster outbreak that reduced the live coral cover on the fore reef to less than 4%. The mutualism may positively affect the reef coral demography and potential for recovery during adverse predation events through shelter of multiple species of small corals near the host coral. Our results show that while functional diversity is supported within the genus, some Trapezia species may be functionally equivalent within the same size class, decreasing the threat of gaps in coral protection caused by absence or replacement of any single Trapezia species.

  16. Influence of Eunice norvegica on feeding and calcification in the coral Lophelia pertusa

    Science.gov (United States)

    Mueller, C. E.; van Oevelen, D.; Middelburg, J. J.; Lundälv, T.

    2012-04-01

    Lophelia pertusa is the main framework building cold-water coral in the North Atlantic. It forms complex reef structures, extending up to several km in length and several meters in hight. Many species are attracted by the coral frame work, forming a highly diverse community within the reef. Although most work has focused on the corals, the functioning of the system also depends on interactions between corals and associated species. A particular example is the Polychaete Eunice norvegica that lives in close association with the coral host. The Polychaete builds a thin texture-tube between living coral branches and stimulates the coral to calcify the tube. This process strengthens the reef framwork by thickening and connecting coral brances and thereby acts as a positive feedback on the development of large reef structures. This comes however at an metabolic cost for the coral due to the enhanced calcificationrates. Another negative feedback for cold-water coral may be food related, since aquaria observations have shown that Eunice occasionally steels food from its host coral. In this study we investigated the interactions between the coral and polychaete related to calcification and food partitioning for two food types (algae and Artemia). The uptake of 13C and 15N labeled food sources by the worm and the coral was studied in chambers with only corals, only the polychaete and both species present. After 7 days, corals and worms were analyzed for isotope incorporation in bulk tissue and skeleton samples and specific fatty acids (13C) using GC-c-IRMS (gas-chromatography-combustion-isotope ratio mass spectrometry). Corals that were kept in the presence of Eunice indeed showed a higher calcification rates of 7.4 ug C (day* g dw coral)-1, evidencing the stimulation of calcification by Eunice. Interestingly, food uptake of algae and Artemia was higher in the coral-worm treatment for both species as compared to the single species treatments. These results shed new light on

  17. Predicting climate-driven regime shifts versus rebound potential in coral reefs.

    Science.gov (United States)

    Graham, Nicholas A J; Jennings, Simon; MacNeil, M Aaron; Mouillot, David; Wilson, Shaun K

    2015-02-05

    Climate-induced coral bleaching is among the greatest current threats to coral reefs, causing widespread loss of live coral cover. Conditions under which reefs bounce back from bleaching events or shift from coral to algal dominance are unknown, making it difficult to predict and plan for differing reef responses under climate change. Here we document and predict long-term reef responses to a major climate-induced coral bleaching event that caused unprecedented region-wide mortality of Indo-Pacific corals. Following loss of >90% live coral cover, 12 of 21 reefs recovered towards pre-disturbance live coral states, while nine reefs underwent regime shifts to fleshy macroalgae. Functional diversity of associated reef fish communities shifted substantially following bleaching, returning towards pre-disturbance structure on recovering reefs, while becoming progressively altered on regime shifting reefs. We identified threshold values for a range of factors that accurately predicted ecosystem response to the bleaching event. Recovery was favoured when reefs were structurally complex and in deeper water, when density of juvenile corals and herbivorous fishes was relatively high and when nutrient loads were low. Whether reefs were inside no-take marine reserves had no bearing on ecosystem trajectory. Although conditions governing regime shift or recovery dynamics were diverse, pre-disturbance quantification of simple factors such as structural complexity and water depth accurately predicted ecosystem trajectories. These findings foreshadow the likely divergent but predictable outcomes for reef ecosystems in response to climate change, thus guiding improved management and adaptation.

  18. In situ observations of coral bleaching in the central Saudi Arabian Red Sea during the 2015/2016 global coral bleaching event.

    Science.gov (United States)

    Monroe, Alison A; Ziegler, Maren; Roik, Anna; Röthig, Till; Hardenstine, Royale S; Emms, Madeleine A; Jensen, Thor; Voolstra, Christian R; Berumen, Michael L

    2018-01-01

    Coral bleaching continues to be one of the most devastating and immediate impacts of climate change on coral reef ecosystems worldwide. In 2015, a major bleaching event was declared as the "3rd global coral bleaching event" by the United States National Oceanic and Atmospheric Administration, impacting a large number of reefs in every major ocean. The Red Sea was no exception, and we present herein in situ observations of the status of coral reefs in the central Saudi Arabian Red Sea from September 2015, following extended periods of high temperatures reaching upwards of 32.5°C in our study area. We examined eleven reefs using line-intercept transects at three different depths, including all reefs that were surveyed during a previous bleaching event in 2010. Bleaching was most prevalent on inshore reefs (55.6% ± 14.6% of live coral cover exhibited bleaching) and on shallower transects (41% ± 10.2% of live corals surveyed at 5m depth) within reefs. Similar taxonomic groups (e.g., Agariciidae) were affected in 2015 and in 2010. Most interestingly, Acropora and Porites had similar bleaching rates (~30% each) and similar relative coral cover (~7% each) across all reefs in 2015. Coral genera with the highest levels of bleaching (>60%) were also among the rarest (coral cover) in 2015. While this bodes well for the relative retention of coral cover, it may ultimately lead to decreased species richness, often considered an important component of a healthy coral reef. The resultant long-term changes in these coral reef communities remain to be seen.

  19. The cold-water coral community as a hot spot of carbon cycling on continental margins: a food-web analysis from Rockall Bank (northeast Atlantic)

    NARCIS (Netherlands)

    Van Oevelen, D.J.; Duineveld, G.; Lavaleye, M.; Mienis, F.; Soetaert, K.E.R.; Heip, C.H.R.

    2009-01-01

    We present a quantitative food-web analysis of the cold-water coral community, i.e., the assembly of living corals, dead coral branches and sediment beneath, associated with the reef-building Lophelia pertusa on the giant carbonate mounds at ~800-m depth at Rockall Bank. Carbon flows, 140 flows

  20. Quantifying bamboo coral growth rate nonlinearity with the radiocarbon bomb spike: A new model for paleoceanographic chronology development

    Science.gov (United States)

    Frenkel, M. M.; LaVigne, M.; Miller, H. R.; Hill, T. M.; McNichol, A.; Gaylord, M. Lardie

    2017-07-01

    Bamboo corals, long-lived cold water gorgonin octocorals, offer unique paleoceanographic archives of the intermediate ocean. These Isididae corals are characterized by alternating gorgonin nodes and high Mg-calcite internodes, which synchronously extend radially. Bamboo coral calcite internodes have been utilized to obtain geochemical proxy data, however, growth rate uncertainty has made it difficult to construct precise chronologies for these corals. Previous studies have relied upon a single tie point from records of the anthropogenic Δ14C bomb spike preserved in the gorgonin nodes of live-collected corals to calculate a mean radial extension rate for the outer 50 years of skeletal growth. Bamboo coral chronologies are typically constructed by applying this mean extension rate to the entire coral record, assuming constant radial extension with coral age. In this study, we aim to test this underlying assumption by analyzing the organic nodes of six California margin bamboo corals at high enough resolution (bomb spike, including two tie points at 1957 and 1970, plus the coral collection date (2007.5) for four samples. Radial extension rates between tie points ranged from 10 to 204 μm/year, with a decrease in growth rate evident between the 1957-1970 and 1970-2007.5 periods for all four corals. A negative correlation between growth rate and coral radius (r =-0.7; p=0.04) was determined for multiple bamboo coral taxa and individuals from the California margin, demonstrating a decline in radial extension rate with specimen age and size. To provide a mechanistic basis for these observations, a simple mathematical model was developed based on the assumption of a constant increase in circular cross sectional area with time to quantify this decline in radial extension rate with coral size between chronological tie points. Applying the area-based model to our Δ14C bomb spike time series from individual corals improves chronology accuracy for all live-collected corals

  1. [Massive residual stones after ESWL for staghorn cystine calculi were completely dissolved by oral administration of alkaline citrate: a case report].

    Science.gov (United States)

    Nagashima, Masazumi; Udagawa, Koichi; Fujinami, Kiyoshi; Murai, Tetsuo; Noguchi, Kazumi

    2007-11-01

    A 62-year-old woman was referred to our hospital for bilateral renal stones. Ultrasonography (US) and computed tomography (CT) revealed bilateral staghorn calculi and atrophic left kidney. She had extracorporeal shock-wave lithotripsy (ESWL) for right renal stone during the first 6 months. However, ESWL was not effective and the patient did not want to continue this treatment. Her stone was composed of cystine. We started oral administration of alkaline citrate. Then massive residual stones were completely dissolved during the next 32 months.

  2. Low calcification in corals in the Great Barrier Reef

    Science.gov (United States)

    Bhattacharya, Atreyee

    2012-10-01

    Reef-building coral communities in the Great Barrier Reef—the world's largest coral reef—may now be calcifying at only about half the rate that they did during the 1970s, even though live coral cover may not have changed over the past 40 years, a new study finds. In recent decades, coral reefs around the world, home to large numbers of fish and other marine species, have been threatened by such human activities as pollution, overfishing, global warming, and ocean acidification; the latter affects ambient water chemistry and availability of calcium ions, which are critical for coral communities to calcify, build, and maintain reefs. Comparing data from reef surveys during the 1970s, 1980s, and 1990s with present-day (2009) measurements of calcification rates in One Tree Island, a coral reef covering 13 square kilometers in the southern part of the Great Barrier Reef, Silverman et al. show that the total calcification rates (the rate of calcification minus the rate of dissolution) in these coral communities have decreased by 44% over the past 40 years; the decrease appears to stem from a threefold reduction in calcification rates during nighttime.

  3. Status and conservation of coral reefs in Costa Rica.

    Science.gov (United States)

    Cortés, Jorge; Jiménez, Carlos E; Fonseca, Ana C; Alvarado, Juan José

    2010-05-01

    Costa Rica has coral communities and reefs on the Caribbean coast and on the Pacific along the coast and off-shore islands. The Southern section of the Caribbean coast has fringing and patch reefs, carbonate banks, and an incipient algal ridge. The Pacific coast has coral communities, reefs and isolated coral colonies. Coral reefs have been seriously impacted in the last 30 years, mainly by sediments (Caribbean coast and some Pacific reefs) and by El Niño warming events (both coasts). Monitoring is being carried out at three sites on each coast. Both coasts suffered significant reductions in live coral cover in the 1980's, but coral cover is now increasing in most sites. The government of Costa Rica is aware of the importance of coral reefs and marine environments in general, and in recent years decrees have been implemented (or are in the process of approval) to protect them, but limited resources endanger their proper management and conservation, including proper outreach to reef users and the general public.

  4. Reef fish and coral assemblages at Maptaput, Rayong Province

    Directory of Open Access Journals (Sweden)

    Voravit Cheevaporn

    2007-06-01

    Full Text Available This study describes the structure of coral and fish assemblages of a group of small islands and pinnacles in the vicinity of Maptaput deep sea port, Rayong Province, Thailand during 2002. The coral and fish assemblages at Saket Island and nearby pinnacle, Hin-Yai, which are located less than 1 km from the deep sea port, had changed. Living coral cover in 2002 was 8% at Hin-Yai and 4% at Saket Island which decreased from 33% and 64%, respectively in the previous report in 1992. Numbers of coral species at Saket Island decreased from 41 species to 13 species. Acropora spp. that previously dominated the area had nearly disappeared. For fishes, a total of 40 species were found in 2002 the numbers decreased to only 6 species at Saket Island and 36 species at Hin-Yai. Fishes that dominated the area are small pomacentrids. After 1997, the conditions of coral and fish assemblages at Saket Island and Hin-Yai had markedly changed, whereas, the conditions found in the nearby area are much better. Sediment load from port construction was the primary cause of the degradation. This should indicate the adverse effect of sedimentation on coral and reef fish assemblages at Maptaput. Coral communities developed on rock pinnacles west of Maptaput deep-sea port are reported and described herein for the first time.

  5. Vulnerability of Coral Reefs to Bioerosion From Land-Based Sources of Pollution

    Science.gov (United States)

    Prouty, Nancy G.; Cohen, Anne; Yates, Kimberly K.; Storlazzi, Curt D.; Swarzenski, Peter W.; White, Darla

    2017-12-01

    Ocean acidification (OA), the gradual decline in ocean pH and [CO32-] caused by rising levels of atmospheric CO2, poses a significant threat to coral reef ecosystems, depressing rates of calcium carbonate (CaCO3) production, and enhancing rates of bioerosion and dissolution. As ocean pH and [CO32-] decline globally, there is increasing emphasis on managing local stressors that can exacerbate the vulnerability of coral reefs to the effects of OA. We show that sustained, nutrient rich, lower pH submarine groundwater discharging onto nearshore coral reefs off west Maui lowers the pH of seawater and exposes corals to nitrate concentrations 50 times higher than ambient. Rates of coral calcification are substantially decreased, and rates of bioerosion are orders of magnitude higher than those observed in coral cores collected in the Pacific under equivalent low pH conditions but living in oligotrophic waters. Heavier coral nitrogen isotope (δ15N) values pinpoint not only site-specific eutrophication, but also a sewage nitrogen source enriched in 15N. Our results show that eutrophication of reef seawater by land-based sources of pollution can magnify the effects of OA through nutrient driven-bioerosion. These conditions could contribute to the collapse of coastal coral reef ecosystems sooner than current projections predict based only on ocean acidification.Plain Language SummaryWe show that sustained, nutrient rich, lower pH submarine groundwater discharging onto nearshore coral reefs off west Maui lowers the pH of seawater and exposes corals to nitrate concentrations 50 times higher than ambient. Rates of coral calcification are substantially decreased, and rates of bioerosion are orders of magnitude higher than those observed in coral cores collected in the Pacific. With many of Maui's coral reefs in significant decline reducing any stressors at a local scale is important to sustaining future coral reef ecosystems and planning for resiliency.

  6. Skeletal light-scattering accelerates bleaching response in reef-building corals.

    Science.gov (United States)

    Swain, Timothy D; DuBois, Emily; Gomes, Andrew; Stoyneva, Valentina P; Radosevich, Andrew J; Henss, Jillian; Wagner, Michelle E; Derbas, Justin; Grooms, Hannah W; Velazquez, Elizabeth M; Traub, Joshua; Kennedy, Brian J; Grigorescu, Arabela A; Westneat, Mark W; Sanborn, Kevin; Levine, Shoshana; Schick, Mark; Parsons, George; Biggs, Brendan C; Rogers, Jeremy D; Backman, Vadim; Marcelino, Luisa A

    2016-03-21

    At the forefront of ecosystems adversely affected by climate change, coral reefs are sensitive to anomalously high temperatures which disassociate (bleaching) photosynthetic symbionts (Symbiodinium) from coral hosts and cause increasingly frequent and severe mass mortality events. Susceptibility to bleaching and mortality is variable among corals, and is determined by unknown proportions of environmental history and the synergy of Symbiodinium- and coral-specific properties. Symbiodinium live within host tissues overlaying the coral skeleton, which increases light availability through multiple light-scattering, forming one of the most efficient biological collectors of solar radiation. Light-transport in the upper ~200 μm layer of corals skeletons (measured as 'microscopic' reduced-scattering coefficient, μ'(S,m)), has been identified as a determinant of excess light increase during bleaching and is therefore a potential determinant of the differential rate and severity of bleaching response among coral species. Here we experimentally demonstrate (in ten coral species) that, under thermal stress alone or combined thermal and light stress, low-μ'(S,m) corals bleach at higher rate and severity than high-μ'(S,m) corals and the Symbiodinium associated with low-μ'(S,m) corals experience twice the decrease in photochemical efficiency. We further modelled the light absorbed by Symbiodinium due to skeletal-scattering and show that the estimated skeleton-dependent light absorbed by Symbiodinium (per unit of photosynthetic pigment) and the temporal rate of increase in absorbed light during bleaching are several fold higher in low-μ'(S,m) corals. While symbionts associated with low-[Formula: see text] corals receive less total light from the skeleton, they experience a higher rate of light increase once bleaching is initiated and absorbing bodies are lost; further precipitating the bleaching response. Because microscopic skeletal light-scattering is a robust predictor

  7. Coral Reef Guidance

    Science.gov (United States)

    Guidance prepared by EPA and Army Corps of Engineers concerning coral reef protection under the Clean Water Act, Marine Protection, Research, and Sanctuaries Act, Rivers and Harbors Act, and Federal Project Authorities.

  8. All Framing Corals

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The data represent predicted habitat suitability for several taxa of deep-sea corals. Predictions were modeled using a statistical machine-learning algorithm called...

  9. Corals and Sclerosponges

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Records of past climate and ocean environment derived from stable isotope, trace metal, and other measurements made on corals and sclerosponges. Parameter keywords...

  10. The roles and interactions of symbiont, host and environment in defining coral fitness

    NARCIS (Netherlands)

    Mieog, J.C.; Olsen, J.L.; Berkelmans, R; Bleuler-Martinez, S.A.; Willis, B.; van Oppen, M.J H

    2009-01-01

    Background: Reef-building corals live in symbiosis with a diverse range of dinoflagellate algae ( genus Symbiodinium) that differentially influence the fitness of the coral holobiont. The comparative role of symbiont type in holobiont fitness in relation to host genotype or the environment, however,

  11. Indirect benefits of high coral cover for non-corallivorous butterflyfishes

    KAUST Repository

    Pratchett, Morgan S.; Blowes, Shane A.; Coker, Darren James; Kubacki, E.; Nowicki, Jessica P.; Hoey, Andrew

    2014-01-01

    Extensive coral loss often leads to pronounced declines in the abundance of fishes, which are not necessarily limited to those fishes that are directly reliant on live coral for food or shelter. This study explored changes in the abundance of two

  12. Climate change, coral bleaching and the future of the world's coral reefs

    Energy Technology Data Exchange (ETDEWEB)

    Hoegh-Guldberg, O. [University of Sydney, Sydney, NSW (Australia). School of Biological Sciences

    1999-07-01

    Sea temperatures in many tropical regions have increased by almost 1{degree}C over the past 100 years, and are currently increasing at about 1-2{degree}C per century. Mass coral bleaching has occurred in association with episodes of elevated sea temperatures over the past 20 years and involves the loss of the zooxanthellae following chronic photoinhibition. Mass bleaching has resulted in significant losses of live coral in many parts of the world. This paper considers the biochemical, physiological and ecological perspectives of coral bleaching. It also uses the outputs of four runs from three models of global climate change which simulate changes in sea temperature and hence how the frequency and intensity of bleaching events will change over the next 100 years. The results suggest that the thermal tolerances of reef-building corals are likely to be exceeded every year within the next few decades. Events as severe as the 1998 event, the worst on record, are likely to become commonplace within 20 years. Most information suggests that the capacity for acclimation by corals has already been exceeded, and that adaptation will be too slow to avert a decline in the quality of the world's reefs.

  13. Coral Reef Ecosystems under Climate Change and Ocean Acidification

    Directory of Open Access Journals (Sweden)

    Ove Hoegh-Guldberg

    2017-05-01

    Full Text Available Coral reefs are found in a wide range of environments, where they provide food and habitat to a large range of organisms as well as providing many other ecological goods and services. Warm-water coral reefs, for example, occupy shallow sunlit, warm, and alkaline waters in order to grow and calcify at the high rates necessary to build and maintain their calcium carbonate structures. At deeper locations (40–150 m, “mesophotic” (low light coral reefs accumulate calcium carbonate at much lower rates (if at all in some cases yet remain important as habitat for a wide range of organisms, including those important for fisheries. Finally, even deeper, down to 2,000 m or more, the so-called “cold-water” coral reefs are found in the dark depths. Despite their importance, coral reefs are facing significant challenges from human activities including pollution, over-harvesting, physical destruction, and climate change. In the latter case, even lower greenhouse gas emission scenarios (such as Representative Concentration Pathway RCP 4.5 are likely drive the elimination of most warm-water coral reefs by 2040–2050. Cold-water corals are also threatened by warming temperatures and ocean acidification although evidence of the direct effect of climate change is less clear. Evidence that coral reefs can adapt at rates which are sufficient for them to keep up with rapid ocean warming and acidification is minimal, especially given that corals are long-lived and hence have slow rates of evolution. Conclusions that coral reefs will migrate to higher latitudes as they warm are equally unfounded, with the observations of tropical species appearing at high latitudes “necessary but not sufficient” evidence that entire coral reef ecosystems are shifting. On the contrary, coral reefs are likely to degrade rapidly over the next 20 years, presenting fundamental challenges for the 500 million people who derive food, income, coastal protection, and a range of

  14. Static measurements of the resilience of Caribbean coral populations

    Directory of Open Access Journals (Sweden)

    Andrew W. Bruckner

    2012-03-01

    Full Text Available The progressive downward shift in dominance of key reef building corals, coupled with dramatic increases in macroalgae and other nuisance species, fields of unstable coral rubble ,loss of structural relief, and declines of major functional groups of fishes is a common occurrence throughout the Caribbean today. The incorporation of resilience principles into management is a proposed strategy to reverse this trend and ensure proper functioning of coral reefs under predicted scenarios of climate change, yet ecosystem processes and functions that underlie reef resilience are not fully understood. Rapid assessments using the Atlantic and Gulf Rapid Reef Assessment (AGRRA and the IUCN Resilience Assessment protocol can provide baseline information on reef resilience. A key aspect of these surveys focuses on coral population dynamics, including measures of coral cover, size, partial and whole-colony mortality, condition, and recruitment. One challenge is that these represent static measures involving a single assessment. Without following individual corals over time, it is difficult to determine rates of survival and growth of recruits and adult colonies, and differentiation of juveniles from small remnants of older colonies may not be possible, especially when macroalgal cover is high. To address this limitation, corals assessed in Bonaire in July 2010 were subdivided into two categories: 1 colonies on the reef substrate; and 2 colonies colonizing dead corals and exposed skeletal surfaces of living corals. Coral populations in Bonaire exhibited many features indicative of high resilience, including high coral cover (often 30-50%, high levels of recruitment, and a large number of corals that settled on dead corals and survived to larger size-classes. Overall, the skeletal surfaces of 12 species of corals were colonized by 16 species of corals, with up to 12 settlers on each colony, most (67% on M. annularis (complex skeletons. Nevertheless, completely

  15. Occurrence of thraustochytrid fungi in corals and coral mucus

    Digital Repository Service at National Institute of Oceanography (India)

    Raghukumar, S.; Balasubramanian

    Occurrence of thraustochytrid fungi in corals, fresh coral mucus and floating and attached mucus detritus from the Lakshadweep Islands in the Arabian Sea was studied. Corallochytrium limacisporum Raghukumar, Thraustochytrium motivum Goldstein...

  16. The continuing decline of coral reefs in Bahrain.

    Science.gov (United States)

    Burt, John A; Al-Khalifa, Khalifa; Khalaf, Ebtesam; Alshuwaikh, Bassem; Abdulwahab, Ahmed

    2013-07-30

    Historically coral reefs of Bahrain were among the most extensive in the southern basin of the Arabian Gulf. However, Bahrain's reefs have undergone significant decline in the last four decades as a result of large-scale coastal development and elevated sea surface temperature events. Here we quantitatively surveyed six sites including most major coral reef habitats around Bahrain and a reef located 72 km offshore. Fleshy and turf algae now dominate Bahrain's reefs (mean: 72% cover), and live coral cover is low (mean: 5.1%). Formerly dominant Acropora were not observed at any site. The offshore Bulthama reef had the highest coral cover (16.3%) and species richness (22 of the 23 species observed, 13 of which were exclusive to this site). All reefs for which recent and historical data are available show continued degradation, and it is unlikely that they will recover under continuing coastal development and projected climate change impacts. Copyright © 2012 Elsevier Ltd. All rights reserved.

  17. Mid-term coral-algal dynamics and conservation status of a Gorgona Island (Tropical Eastern Pacific coral reef

    Directory of Open Access Journals (Sweden)

    Fernando A Zapata

    2010-05-01

    Full Text Available Colombian coral reefs, as other reefs worldwide, have deteriorated significantly during the last few decades due to both natural and anthropogenic disturbances. The National Monitoring System for Coral Reefs in Colombia (SIMAC was established in 1998 to provide long-term data bases to assess the changes of Colombian coral reefs against perturbations and to identify the factors responsible for their decline or recovery. On the Pacific coast, data on coral and algal cover have been collected yearly during seven consecutive years (1998-2004 from 20 permanent transects in two sites at La Azufrada reef, Gorgona Island. Overall, coral cover was high (55.1%-65.7% and algal cover low (28.8%-37.5% and both exhibited significant changes among years, most notably on shallow areas. Differences between sites in both coral and algal cover were present since the study began and may be explained by differences in sedimentation stress derived from soil runoff. Differences between depths most likely stem from the effects of low tidal sub-aerial exposures. Particularly intense sub-aerial exposures occurred repeatedly during January-March, 2001 and accounted for a decrease in coral and an increase in algal cover on shallow depths observed later that year. Additionally, the shallow area on the Northern site seems to be negatively affected by the combined effect of sedimentation and low tidal exposure. However, a decrease in coral cover and an increase of algal cover since 2001 on deep areas at both sites remain unexplained. Comparisons with previous studies suggest that the reef at La Azufrada has been more resilient than other reefs in the Tropical Eastern Pacific (TEP, recovering pre-disturbance (1979 levels of coral cover within a 10 year period after the 1982-83 El Niño, which caused 85% mortality. Furthermore, the effects of the 1997-98 El Niño, indicated by the difference in overall live coral cover between 1998 and 1999, were minor (<6% reduction. Despite

  18. Mid-term coral-algal dynamics and conservation status of a Gorgona Island (Tropical Eastern Pacific) coral reef.

    Science.gov (United States)

    Zapata, Fernando A; Rodríguez-Ramírez, Alberto; Caro-Zambrano, Carlos; Garzón-Ferreira, Jaime

    2010-05-01

    Colombian coral reefs, as other reefs worldwide, have deteriorated significantly during the last few decades due to both natural and anthropogenic disturbances. The National Monitoring System for Coral Reefs in Colombia (SIMAC) was established in 1998 to provide long-term data bases to assess the changes of Colombian coral reefs against perturbations and to identify the factors responsible for their decline or recovery. On the Pacific coast, data on coral and algal cover have been collected yearly during seven consecutive years (1998-2004) from 20 permanent transects in two sites at La Azufrada reef, Gorgona Island. Overall, coral cover was high (55.1%-65.7%) and algal cover low (28.8%-37.5%) and both exhibited significant changes among years, most notably on shallow areas. Differences between sites in both coral and algal cover were present since the study began and may be explained by differences in sedimentation stress derived from soil runoff. Differences between depths most likely stem from the effects of low tidal sub-aerial exposures. Particularly intense sub-aerial exposures occurred repeatedly during January-March, 2001 and accounted for a decrease in coral and an increase in algal cover on shallow depths observed later that year. Additionally, the shallow area on the Northern site seems to be negatively affected by the combined effect of sedimentation and low tidal exposure. However, a decrease in coral cover and an increase of algal cover since 2001 on deep areas at both sites remain unexplained. Comparisons with previous studies suggest that the reef at La Azufrada has been more resilient than other reefs in the Tropical Eastern Pacific (TEP), recovering pre-disturbance (1979) levels of coral cover within a 10 year period after the 1982-83 El Niño, which caused 85% mortality. Furthermore, the effects of the 1997-98 El Niño, indicated by the difference in overall live coral cover between 1998 and 1999, were minor (< 6% reduction). Despite recurrent

  19. Calcite/aragonite-biocoated artificial coral reefs for marine parks

    Directory of Open Access Journals (Sweden)

    Volodymyr Ivanov

    2017-08-01

    Full Text Available Natural formation of the coral reefs is complicated by slow biomediated precipitation of calcium carbonate from seawater. Therefore, manufactured artificial coral reefs can be used for the formation of “underwater gardens” in marine parks for the recreational fishing and diving that will protect natural coral reefs from negative anthropogenic effects. Additionally, the coating of the concrete, plastic or wooden surfaces of artificial coral reef with calcium carbonate layer could promote attachment and growth of coral larvae and photosynthetic epibiota on these surfaces. Three methods of biotechnological coating of the artificial coral reefs have been tested: (1 microbially induced calcium carbonate precipitation from concentrated calcium chloride solution using live bacterial culture of Bacillus sp. VS1 or dead but urease-active cells of Yaniella sp. VS8; (2 precipitation from calcium bicarbonate solution; (3 precipitation using aerobic oxidation of calcium acetate by bacteria Bacillus ginsengi strain VSA1. The thickness of biotechnologically produced calcium carbonate coating layer was from 0.3 to 3 mm. Biocoating using calcium salt and urea produced calcite in fresh water and aragonite in seawater. The calcium carbonate-coated surfaces were colonized in aquarium with seawater and hard corals as inoculum or in aquarium with fresh water using cyanobacteria Chlorella sorokiana as inoculum. The biofilm on the light-exposed side of calcium carbonate-coated surfaces was formed after six weeks of incubation and developed up to the average thickness of 250 µm in seawater and about 150 µm in fresh water after six weeks of incubation. The biotechnological manufacturing of calcium carbonate-coated concrete, plastic, or wooden surfaces of the structures imitating natural coral reef is technologically feasible. It could be commercially attractive solution for the introduction of aesthetically pleasant artificial coral reefs in marine parks and

  20. High salinity conveys thermotolerance in the coral model Aiptasia

    KAUST Repository

    Gegner, Hagen M.

    2017-12-15

    The endosymbiosis between dinoflagellate algae of the genus Symbiodinium and stony corals provides the foundation of coral reef ecosystems. Coral bleaching, the expulsion of endosymbionts from the coral host tissue as a consequence of heat or light stress, poses a threat to reef ecosystem functioning on a global scale. Hence, a better understanding of the factors contributing to heat stress susceptibility and tolerance is needed. In this regard, some of the most thermotolerant corals also live in particularly saline habitats, but possible effects of high salinity on thermotolerance in corals are anecdotal. Here we test the hypothesis that high salinity may lead to increased thermotolerance. We conducted a heat stress experiment at low, intermediate, and high salinities using a set of host-endosymbiont combinations of the coral model Aiptasia. As expected, all host-endosymbiont combinations showed reduced photosynthetic efficiency and endosymbiont loss during heat stress, but the severity of bleaching was significantly reduced with increasing salinities for one of the host-endosymbiont combinations. Our results show that higher salinities can convey increased thermotolerance in Aiptasia, although this effect seems to be dependent on the particular host strain and/or associated symbiont type. This finding may help explain the extraordinarily high thermotolerance of corals in high salinity environments such as the Red Sea and the Persian/Arabian Gulf and provides novel insight regarding factors that contribute to thermotolerance. Since our results are based on a salinity effect in symbiotic sea anemones, it remains to be determined whether this salinity effect can also be observed in stony corals.

  1. High salinity conveys thermotolerance in the coral model Aiptasia

    KAUST Repository

    Gegner, Hagen M.; Ziegler, Maren; Radecker, Nils; Buitrago Lopez, Carol; Aranda, Manuel; Voolstra, Christian R.

    2017-01-01

    The endosymbiosis between dinoflagellate algae of the genus Symbiodinium and stony corals provides the foundation of coral reef ecosystems. Coral bleaching, the expulsion of endosymbionts from the coral host tissue as a consequence of heat or light stress, poses a threat to reef ecosystem functioning on a global scale. Hence, a better understanding of the factors contributing to heat stress susceptibility and tolerance is needed. In this regard, some of the most thermotolerant corals also live in particularly saline habitats, but possible effects of high salinity on thermotolerance in corals are anecdotal. Here we test the hypothesis that high salinity may lead to increased thermotolerance. We conducted a heat stress experiment at low, intermediate, and high salinities using a set of host-endosymbiont combinations of the coral model Aiptasia. As expected, all host-endosymbiont combinations showed reduced photosynthetic efficiency and endosymbiont loss during heat stress, but the severity of bleaching was significantly reduced with increasing salinities for one of the host-endosymbiont combinations. Our results show that higher salinities can convey increased thermotolerance in Aiptasia, although this effect seems to be dependent on the particular host strain and/or associated symbiont type. This finding may help explain the extraordinarily high thermotolerance of corals in high salinity environments such as the Red Sea and the Persian/Arabian Gulf and provides novel insight regarding factors that contribute to thermotolerance. Since our results are based on a salinity effect in symbiotic sea anemones, it remains to be determined whether this salinity effect can also be observed in stony corals.

  2. Feeding enhances skeletal growth and energetic stores of an Atlantic coral under significantly elevated CO2

    Science.gov (United States)

    Drenkard, L.; Cohen, A. L.; McCorkle, D. C.; dePutron, S.; Zicht, A.

    2011-12-01

    Many corals living under the relatively acidic conditions of naturally high-CO2 reefs are calcifying as fast or faster than their conspecifics on naturally low CO2 reefs. These observations are inconsistent with most experimental work that shows a negative impact of ocean acidification on coral calcification. We investigated the link between coral nutritional (energetic) status and the calcification response to significantly elevated CO2. Juveniles of the Atlantic brooding coral, Favia fragum were reared for three weeks under fully crossed CO2 and feeding conditions: ambient (μar =1.6+-0.2) and high CO2 (μar =3.7+-0.3); fed and unfed. In most measured parameters, the effect of feeding is much stronger than the effect of CO2. Nutritionally enhanced (fed) corals, regardless of CO2 condition, have higher concentrations of total lipid and their skeletons are both significantly larger and more developmentally advanced than those of corals relying solely on autotrophy. In measurements of corallite weight, where the impact of CO2 is most apparent, no statistical difference is observed between unfed corals under ambient CO2 conditions and fed corals reared under 1600 ppm CO2. Our results suggest that coral energetic status, which can be enhanced by heterotrophic feeding but depleted by stressors such as bleaching, will play a key role in the coral response to ocean acidification and thus, in the resilience of reef ecosystems under climate change.

  3. Mapping Coral Reef Resilience Indicators Using Field and Remotely Sensed Data

    Directory of Open Access Journals (Sweden)

    Stuart Phinn

    2013-03-01

    Full Text Available In the face of increasing climate-related impacts on coral reefs, the integration of ecosystem resilience into marine conservation planning has become a priority. One strategy, including resilient areas in marine protected area (MPA networks, relies on information on the spatial distribution of resilience. We assess the ability to model and map six indicators of coral reef resilience—stress-tolerant coral taxa, coral generic diversity, fish herbivore biomass, fish herbivore functional group richness, density of juvenile corals and the cover of live coral and crustose coralline algae. We use high spatial resolution satellite data to derive environmental predictors and use these in random forest models, with field observations, to predict resilience indicator values at unsampled locations. Predictions are compared with those obtained from universal kriging and from a baseline model. Prediction errors are estimated using cross-validation, and the ability to map each resilience indicator is quantified as the percentage reduction in prediction error compared to the baseline model. Results are most promising (percentage reduction = 18.3% for mapping the cover of live coral and crustose coralline algae and least promising (percentage reduction = 0% for coral diversity. Our study has demonstrated one approach to map indicators of coral reef resilience. In the context of MPA network planning, the potential to consider reef resilience in addition to habitat and feature representation in decision-support software now exists, allowing planners to integrate aspects of reef resilience in MPA network development.

  4. Osmoadjustment in the Coral Holobiont

    KAUST Repository

    Rö thig, Till

    2017-01-01

    and amino acids to be putatively involved in the osmoadjustment. Importantly, under high salinity the osmolyte floridoside was consistently increased. This could be corroborated in the coral model Aiptasia and in corals from the Persian/Arabian Gulf, where

  5. Mapping Prevalence and Incidence of Coral Disease in reef-building corals at two Natural Reserves of the Southwest Puerto Rico

    Science.gov (United States)

    Sanchez Viruet, I.; Irizarry-Soto, E.; Ruiz-Valentín, I.

    2016-02-01

    Coral diseases seems to be the main cause of coral reef decline in the Caribbean. Before the bleaching event of 2005, coral reefs in Puerto Rico were dominated by the reef-building taxa: Orbicella annularis, Porites astreoides, Montastrea cavernosa, Agaricia agaracites and Colpophyllia natans. After the event, live-coral cover significantly declined and more than 90% of the scleractinian corals in the U.S. Virgin Islands and Puerto Rico showed signals of thermal stressors. The prevalence of coral diseases in five reef-building coral (Orbicella annularis, Orbicella franksi, Orbicella faveolata, Porites porites and Pseudiploria strigosa) species was assessed by tagging, photographing, and mapping all diseased and healthy colonies within 10 permanent 40m2 band transects at each inshore and mid-shelf reefs of Belvedere and Punta Guaniquilla Natural Reserves using a random stratified sampling method. Maximum and perpendicular diameter was used to assess coral size using Coral Point Count with Excel Extension. Corals were classified into three size class populations (class I: 0-50cm, class II: 50-100cm and class III: >100 cm). Data was used to develop a GIS-based map containing coral species, size and disease presence. Preliminary results of the inshore area showed a higher disease prevalence in Belvedere natural reserve and for P. strigosa (17.1%) and O. annularis (9.3%). Frequency distribution analysis showed a dominance of O. faveolata at Punta Guaniquilla and Belvedere (127 and 88 individuals respectively). Size class I dominates the distribution of each species within the natural reserves with a higher disease prevalence. Future work include continue prevalence surveys of the outer reef shelf on both natural reserves, monitoring and GIS-based mapping of incidence and resilience through time. This study will help in the assessment of the status of the coral reef of the southwest insular platform.

  6. Molluscan assemblages on coral reefs and associated hard substrata in the northern Red Sea

    Science.gov (United States)

    Zuschin, M.; Hohenegger, J.; Steininger, F.

    2001-09-01

    Information on spatial variability and distribution patterns of organisms in coral reef environments is necessary to evaluate the increasing anthropogenic disturbance of marine environments (Richmond 1993; Wilkinson 1993; Dayton 1994). Therefore different types of subtidal, reef-associated hard substrata (reef flats, reef slopes, coral carpets, coral patches, rock grounds), each with different coral associations, were investigated to determine the distribution pattern of molluscs and their life habits (feeding strategies and substrate relations). The molluscs were strongly dominated by taxa with distinct relations to corals, and five assemblages were differentiated. The Dendropoma maxima assemblage on reef flats is a discrete entity, strongly dominated by this encrusting and suspension-feeding gastropod. All other assemblages are arranged along a substrate gradient of changing coral associations and potential molluscan habitats. The Coralliophila neritoidea- Barbatia foliata assemblage depends on the presence of Porites and shows a dominance of gastropods feeding on corals and of bivalves associated with living corals. The Chamoidea- Cerithium spp. assemblage on rock grounds is strongly dominated by encrusting bivalves. The Drupella cornus-Pteriidae assemblage occurs on Millepora- Acropora reef slopes and is strongly dominated by bivalves associated with living corals. The Barbatia setigera- Ctenoides annulata assemblage includes a broad variety of taxa, molluscan life habits and bottom types, but occurs mainly on faviid carpets and is transitional among the other three assemblages. A predicted degradation of coral coverage to rock bottoms due to increasing eutrophication and physical damage in the study area (Riegl and Piller 2000) will result in a loss of coral-associated molluscs in favor of bivalve crevice dwellers in dead coral heads and of encrusters on dead hard substrata.

  7. Coral lipids and environmental stress.

    Science.gov (United States)

    Harriott, V J

    1993-04-01

    Environmental monitoring of coral reefs is presently limited by difficulties in recognising coral stress, other than by monitoring coral mortality over time. A recent report described an experiment demonstrating that a measured lipid index declined in shaded corals. The technique described might have application in monitoring coral health, with a decline in coral lipid index as an indicator of coral stress. The application of the technique as a practical monitoring tool was tested for two coral species from the Great Barrier Reef. Consistent with the previous results, lipid index for Pocillopora damicornis initially declined over a period of three weeks in corals maintained in filtered seawater in the dark, indicating possible utilization of lipid stored as energy reserves. However, lipid index subsequently rose to near normal levels. In contrast, lipid index of Acropora formosa increased after four weeks in the dark in filtered seawater. The results showed considerable variability in lipid content between samples from the same colony. Results were also found to be dependent on fixation times and sample weight, introducing potential error into the practical application of the technique. The method as described would be unsuitable for monitoring environmental stress in corals, but the search for a practical method to monitor coral health should continue, given its importance in coral reef management.

  8. Modeling regional coral reef responses to global warming and changes in ocean chemistry: Caribbean case study

    Science.gov (United States)

    Buddemeier, R.W.; Lane, D.R.; Martinich, J.A.

    2011-01-01

    Climatic change threatens the future of coral reefs in the Caribbean and the important ecosystem services they provide. We used a simulation model [Combo ("COral Mortality and Bleaching Output")] to estimate future coral cover in the part of the eastern Caribbean impacted by a massive coral bleaching event in 2005. Combo calculates impacts of future climate change on coral reefs by combining impacts from long-term changes in average sea surface temperature (SST) and ocean acidification with impacts from episodic high temperature mortality (bleaching) events. We used mortality and heat dose data from the 2005 bleaching event to select historic temperature datasets, to use as a baseline for running Combo under different future climate scenarios and sets of assumptions. Results suggest a bleak future for coral reefs in the eastern Caribbean. For three different emissions scenarios from the Intergovernmental Panel on Climate Change (IPCC; B1, A1B, and A1FI), coral cover on most Caribbean reefs is projected to drop below 5% by the year 2035, if future mortality rates are equivalent to some of those observed in the 2005 event (50%). For a scenario where corals gain an additional 1-1. 5??C of heat tolerance through a shift in the algae that live in the coral tissue, coral cover above 5% is prolonged until 2065. Additional impacts such as storms or anthropogenic damage could result in declines in coral cover even faster than those projected here. These results suggest the need to identify and preserve the locations that are likely to have a higher resiliency to bleaching to save as many remnant populations of corals as possible in the face of projected wide-spread coral loss. ?? 2011 The Author(s).

  9. Anthropogenic impacts on coral reefs and their effect on fishery of ...

    African Journals Online (AJOL)

    Anthropogenic impacts on coral reefs and their effect on fishery of Kilwa District, Tanzania. ... Tanzanian fishing coastal communities live on fishing activities as one their major economic activities, practicing fishing on shallow ... Overfishing,

  10. The giant Mauritanian cold-water coral mound province: Oxygen control on coral mound formation

    Science.gov (United States)

    Wienberg, Claudia; Titschack, Jürgen; Freiwald, André; Frank, Norbert; Lundälv, Tomas; Taviani, Marco; Beuck, Lydia; Schröder-Ritzrau, Andrea; Krengel, Thomas; Hebbeln, Dierk

    2018-04-01

    The largest coherent cold-water coral (CWC) mound province in the Atlantic Ocean exists along the Mauritanian margin, where up to 100 m high mounds extend over a distance of ∼400 km, arranged in two slope-parallel chains in 400-550 m water depth. Additionally, CWCs are present in the numerous submarine canyons with isolated coral mounds being developed on some canyon flanks. Seventy-seven Uranium-series coral ages were assessed to elucidate the timing of CWC colonisation and coral mound development along the Mauritanian margin for the last ∼120,000 years. Our results show that CWCs were present on the mounds during the Last Interglacial, though in low numbers corresponding to coral mound aggradation rates of 16 cm kyr-1. Most prolific periods for CWC growth are identified for the last glacial and deglaciation, resulting in enhanced mound aggradation (>1000 cm kyr-1), before mound formation stagnated along the entire margin with the onset of the Holocene. Until today, the Mauritanian mounds are in a dormant state with only scarce CWC growth. In the canyons, live CWCs are abundant since the Late Holocene at least. Thus, the canyons may serve as a refuge to CWCs potentially enabling the observed modest re-colonisation pulse on the mounds along the open slope. The timing and rate of the pre-Holocene coral mound aggradation, and the cessation of mound formation varied between the individual mounds, which was likely the consequence of vertical/lateral changes in water mass structure that placed the mounds near or out of oxygen-depleted waters, respectively.

  11. Static measurements of the resilience of Caribbean coral populations

    Directory of Open Access Journals (Sweden)

    Andrew W. Bruckner

    2012-03-01

    Full Text Available The progressive downward shift in dominance of key reef building corals, coupled with dramatic increases in macroalgae and other nuisance species, fields of unstable coral rubble ,loss of structural relief, and declines of major functional groups of fishes is a common occurrence throughout the Caribbean today. The incorporation of resilience principles into management is a proposed strategy to reverse this trend and ensure proper functioning of coral reefs under predicted scenarios of climate change, yet ecosystem processes and functions that underlie reef resilience are not fully understood. Rapid assessments using the Atlantic and Gulf Rapid Reef Assessment (AGRRA and the IUCN Resilience Assessment protocol can provide baseline information on reef resilience. A key aspect of these surveys focuses on coral population dynamics, including measures of coral cover, size, partial and whole-colony mortality, condition, and recruitment. One challenge is that these represent static measures involving a single assessment. Without following individual corals over time, it is difficult to determine rates of survival and growth of recruits and adult colonies, and differentiation of juveniles from small remnants of older colonies may not be possible, especially when macroalgal cover is high. To address this limitation, corals assessed in Bonaire in July 2010 were subdivided into two categories: 1 colonies on the reef substrate; and 2 colonies colonizing dead corals and exposed skeletal surfaces of living corals. Coral populations in Bonaire exhibited many features indicative of high resilience, including high coral cover (often 30-50%, high levels of recruitment, and a large number of corals that settled on dead corals and survived to larger size-classes. Overall, the skeletal surfaces of 12 species of corals were colonized by 16 species of corals, with up to 12 settlers on each colony, most (67% on M. annularis (complex skeletons. Nevertheless, completely

  12. Ocean Warming Slows Coral Growth in the Central Red Sea

    KAUST Repository

    Cantin, N. E.; Cohen, A. L.; Karnauskas, K. B.; Tarrant, A. M.; McCorkle, D. C.

    2010-01-01

    Sea surface temperature (SST) across much of the tropics has increased by 0.4° to 1°C since the mid-1970s. A parallel increase in the frequency and extent of coral bleaching and mortality has fueled concern that climate change poses a major threat to the survival of coral reef ecosystems worldwide. Here we show that steadily rising SSTs, not ocean acidification, are already driving dramatic changes in the growth of an important reef-building coral in the central Red Sea. Three-dimensional computed tomography analyses of the massive coral Diploastrea heliopora reveal that skeletal growth of apparently healthy colonies has declined by 30% since 1998. The same corals responded to a short-lived warm event in 1941/1942, but recovered within 3 years as the ocean cooled. Combining our data with climate model simulations by the Intergovernmental Panel on Climate Change, we predict that should the current warming trend continue, this coral could cease growing altogether by 2070.

  13. Age, growth rates, and paleoclimate studies of deep sea corals

    Science.gov (United States)

    Prouty, Nancy G; Roark, E. Brendan; Andrews, Allen; Robinson, Laura; Hill, Tessa; Sherwood, Owen; Williams, Branwen; Guilderson, Thomas P.; Fallon, Stewart

    2015-01-01

    Deep-water corals are some of the slowest growing, longest-lived skeletal accreting marine organisms. These habitat-forming species support diverse faunal assemblages that include commercially and ecologically important organisms. Therefore, effective management and conservation strategies for deep-sea corals can be informed by precise and accurate age, growth rate, and lifespan characteristics for proper assessment of vulnerability and recovery from perturbations. This is especially true for the small number of commercially valuable, and potentially endangered, species that are part of the black and precious coral fisheries (Tsounis et al. 2010). In addition to evaluating time scales of recovery from disturbance or exploitation, accurate age and growth estimates are essential for understanding the life history and ecology of these habitat-forming corals. Given that longevity is a key factor for population maintenance and fishery sustainability, partly due to limited and complex genetic flow among coral populations separated by great distances, accurate age structure for these deep-sea coral communities is essential for proper, long-term resource management.

  14. Ocean Warming Slows Coral Growth in the Central Red Sea

    KAUST Repository

    Cantin, N. E.

    2010-07-15

    Sea surface temperature (SST) across much of the tropics has increased by 0.4° to 1°C since the mid-1970s. A parallel increase in the frequency and extent of coral bleaching and mortality has fueled concern that climate change poses a major threat to the survival of coral reef ecosystems worldwide. Here we show that steadily rising SSTs, not ocean acidification, are already driving dramatic changes in the growth of an important reef-building coral in the central Red Sea. Three-dimensional computed tomography analyses of the massive coral Diploastrea heliopora reveal that skeletal growth of apparently healthy colonies has declined by 30% since 1998. The same corals responded to a short-lived warm event in 1941/1942, but recovered within 3 years as the ocean cooled. Combining our data with climate model simulations by the Intergovernmental Panel on Climate Change, we predict that should the current warming trend continue, this coral could cease growing altogether by 2070.

  15. Relationships between structural complexity, coral traits, and reef fish assemblages

    Science.gov (United States)

    Darling, Emily S.; Graham, Nicholas A. J.; Januchowski-Hartley, Fraser A.; Nash, Kirsty L.; Pratchett, Morgan S.; Wilson, Shaun K.

    2017-06-01

    With the ongoing loss of coral cover and the associated flattening of reef architecture, understanding the links between coral habitat and reef fishes is of critical importance. Here, we investigate whether considering coral traits and functional diversity provides new insights into the relationship between structural complexity and reef fish communities, and whether coral traits and community composition can predict structural complexity. Across 157 sites in Seychelles, Maldives, the Chagos Archipelago, and Australia's Great Barrier Reef, we find that structural complexity and reef zone are the strongest and most consistent predictors of reef fish abundance, biomass, species richness, and trophic structure. However, coral traits, diversity, and life histories provided additional predictive power for models of reef fish assemblages, and were key drivers of structural complexity. Our findings highlight that reef complexity relies on living corals—with different traits and life histories—continuing to build carbonate skeletons, and that these nuanced relationships between coral assemblages and habitat complexity can affect the structure of reef fish assemblages. Seascape-level estimates of structural complexity are rapid and cost effective with important implications for the structure and function of fish assemblages, and should be incorporated into monitoring programs.

  16. Evidence for the bioerosion of deep-water corals by echinoids in the Northeast Atlantic

    Science.gov (United States)

    Stevenson, Angela; Rocha, Carlos

    2013-01-01

    In situ video observations of echinoids interacting with deep-sea coral are common in the deep-sea, but paradoxically the deep-sea literature is devoid of reports of bioerosion by extant echinoids. Here we present evidence of contemporary bioerosion of cold-water coral by four species of deep-sea echinoids, Gracilechinus elegans, Gracilechinus alexandri, Cidaris cidaris, and Araeosoma fenestratum, showing that they actively predate on the living framework of reef building corals, Lophelia pertusa and Madrepora oculata, in the NE Atlantic. Echinoid specimens were collected in six canyons located in the Bay of Biscay, France and two canyons on the north side of the Porcupine Bank and Goban Spur, Ireland. A total of 44 live specimens from the four taxa (9 of G. elegans, 4 of G. alexandri, 21 of C. cidaris and 10 of A. fenestratum) showed recent ingestion of the coral infrastructure. Upon dissection, live coral skeleton was observed encased in a thick mucus layer within the gastrointestinal tract of G. elegans and G. alexandri while both live and dead coral fragments were found in C. cidaris and A. fenestratum. Echinoid bioerosion limits the growth of shallow-water reefs. Our observations suggest that echinoids may also play an important role in the ecology of deep-water coral reefs.

  17. Boat noise prevents soundscape-based habitat selection by coral planulae.

    Science.gov (United States)

    Lecchini, David; Bertucci, Frédéric; Gache, Camille; Khalife, Adam; Besson, Marc; Roux, Natacha; Berthe, Cecile; Singh, Shubha; Parmentier, Eric; Nugues, Maggy M; Brooker, Rohan M; Dixson, Danielle L; Hédouin, Laetitia

    2018-06-18

    Understanding the relationship between coral reef condition and recruitment potential is vital for the development of effective management strategies that maintain coral cover and biodiversity. Coral larvae (planulae) have been shown to use certain sensory cues to orient towards settlement habitats (e.g. the odour of live crustose coralline algae - CCA). However, the influence of auditory cues on coral recruitment, and any effect of anthropogenic noise on this process, remain largely unknown. Here, we determined the effect of protected reef (MPA), exploited reef (non-MPA) soundscapes, and a source of anthropogenic noise (boat) on the habitat preference for live CCA over dead CCA in the planula of two common Indo-Pacific coral species (Pocillopora damicornis and Acropora cytherea). Soundscapes from protected reefs significantly increased the phonotaxis of planulae of both species towards live CCA, especially when compared to boat noise. Boat noise playback prevented this preferential selection of live CCA as a settlement substrate. These results suggest that sources of anthropogenic noise such as motor boat can disrupt the settlement behaviours of coral planulae. Acoustic cues should be accounted for when developing management strategies aimed at maximizing larval recruitment to coral reefs.

  18. Distribution and abundance of elkhorn coral, Acropora palmata, and prevalence of white-band disease at Buck Island Reef National Monument, St. Croix, US Virgin Islands

    Science.gov (United States)

    Mayor, Philippe A.; Rogers, Caroline S.; Hillis-Starr, Zandy M.

    2006-05-01

    In the 1970s and 1980s elkhorn coral, Acropora palmata, declined dramatically throughout the Caribbean primarily due to white-band disease (WBD). In 2005, elkhorn coral was proposed for listing as threatened under the US Endangered Species Act. WBD was first documented at Buck Island Reef National Monument (BIRNM). Together with hurricanes WBD reduced live elkhorn coral coverage by probably over 90%. In the past decade some recovery has been observed at BIRNM. This study assessed the distribution and abundance of elkhorn coral and estimated the prevalence of WBD at the monument. Within an area of 795 ha, we estimated 97,232 134,371 (95% confidence limits) elkhorn coral colonies with any dimension of connected live tissue greater than one meter, about 3% of which were infected by WBD. Despite some recovery, the elkhorn coral density remains low and WBD may continue to present a threat to the elkhorn coral population.

  19. Assessment of the Coral Temperature Proxies for Orbicella faveolata in the Southwestern Gulf of Mexico

    Science.gov (United States)

    Vara, M. A.; DeLong, K. L.; Herrmann, A. D.; Ouellette, G., Jr.; Richey, J. N.

    2017-12-01

    Coral Sr/Ca is a robust proxy of sea surface temperature (SST); however, discrepancies in the Sr/Ca-SST relationship among colonies of the same species may reduce confidence in absolute temperature reconstructions. Furthermore, terrestrial carbonate weathering can provide local sources of Sr and/or Ca to coastal waters that may disrupt the temperature-based coral Sr/Ca signal. Thus other trace metal SST proxies have been suggested to circumvent these issues (Li/Ca, Li/Mg, and Sr-U). Coral Ba/Ca has been used as a proxy for runoff and coastal upwelling, and therefore may be used to identify intervals when these processes overprint the Sr/Ca-SST signal. This study tests multiple coral SST proxies using reproducibility assessments to determine the best performing SST proxy. We conduct these assessments with cores recovered in 1991 by the U.S. Geological Survey from five Orbicella faveolata colonies from three reefs offshore of Veracruz, Mexico (19.06°N, 96.93°W) in water depths varying from 3 to 12 m. Previous studies found micromilling the complex skeletal structure of O. faveolata challenging and that monthly resolution may not recover full seasonal cycles. We use a laser ablation inductively coupled plasma mass spectrometer to simultaneously sample this coral's structure at weekly intervals spanning 8 years for Li/Ca, Li/Mg, Sr-U, Sr/Ca, and Ba/Ca. Here we found coral Li/Ca means and seasonal variations are similar among colonies thus this proxy may capture absolute temperature and SST variability. Similar to previous research with Porites corals, Li/Ca in these O. faveolata corals decreases with increases in SST with similar slopes and intercepts. During the last 10 years of these corals' lives, coral Sr/Ca analysis reveals a mean shift among colonies suggesting an external source could have disrupted the Sr/Ca signal, possibly seasonal runoff and/or winter upwelling common to Veracruz waters. Coral Ba/Ca analyses reveals elevated values in winters that coincide

  20. Distribution and structure of the southernmost Caribbean coral reefs: golfo de Urabá, Colombia

    Directory of Open Access Journals (Sweden)

    J. M. Díaz

    2000-09-01

    Full Text Available The Gulf of Urabá represents the southernmost portion of the Caribbean Sea. Due to the large amounts of sediment and freshwater discharged by the Atrato river and several minor streams, water conditions in the area are far from being optimal for coral settlement and growth. However, fringing and patch reefs are developed along the rocky shores of the northwest margin of the Gulf. Based on field observations performed at 44 sites (12 of them assessed quantitatively, interpretation of air photography of the area and depth profiles, the distribution, structure and zonation of the reefs are described. Classification analysis of the 12 sample sites yielded four coral assemblages: Diploria strigosa, crustose algae, Siderastrea siderea, Agaricia spp., and mixed massive corals. Other two assemblages, dominated respectively by Millepora complanata and thickets of Acropora palmata were noticed during reconnaissance dives. The distribution of these zones within the reef seems likely to be mainly controlled by wave exposure, bottom topography, sedimentation, and light penetration. Reef development, coral diversity and live coral cover increase along the coast in a SE-NW direction, with an evident maximum near to the cove of Sapzurro, suggesting an overall improvement of conditions for coral growth and settlement in that direction. A total of 33 species of hard corals were recorded during the survey. It is apparent that the live coral cover, particularly of foliose and branching species, has notably declined recently.

  1. Mesophotic coral-reef environments depress the reproduction of the coral Paramontastraea peresi in the Red Sea

    Science.gov (United States)

    Feldman, Bar; Shlesinger, Tom; Loya, Yossi

    2018-03-01

    With more than 450 studied species, coral reproduction is a well-known research field. However, the vast majority of coral reproduction research has focused exclusively on shallow reefs. The incentive for the present study was: (1) the recent accelerated global degradation of coral reefs; (2) the growing interest in mesophotic coral ecosystems (MCEs; 30-120 m depth) and their potential to serve as a larval source for shallow reefs; and (3) the lack of information on MCE coral reproduction. Here, we compare the reproduction and ecology of the depth-generalist coral Paramontastraea peresi between shallow (5-10 m) and mesophotic (40-45 m) habitats in the Gulf of Eilat/Aqaba, Red Sea. Field surveys were conducted to assess the living cover, abundance, and size frequency distribution of P. peresi. Four to six colonies from each habitat were sampled monthly between April 2015 and January 2017, and the gametogenesis cycles, fecundity, and oocyte sizes were measured. The reproductive cycle in the MCEs was shorter than in the shallow reef. Despite having larger polyps, the mesophotic colonies contained significantly smaller and fewer oocytes per polyp. In spite of the relatively stable environmental conditions of the MCEs, which may contribute to coral survival, scarcity of sunlight is probably a major energetic impediment to investment in reproduction by P. peresi at mesophotic depths. Further intensive reproductive studies in mesophotic reefs are thus required to assess the ability of corals in this environment to reproduce and constitute a larval source for depleted shallow-water reefs.

  2. The ;Sardinian cold-water coral province; in the context of the Mediterranean coral ecosystems

    Science.gov (United States)

    Taviani, M.; Angeletti, L.; Canese, S.; Cannas, R.; Cardone, F.; Cau, A.; Cau, A. B.; Follesa, M. C.; Marchese, F.; Montagna, P.; Tessarolo, C.

    2017-11-01

    A new cold-water coral (CWC) province has been identified in the Mediterranean Sea in the Capo Spartivento canyon system offshore the southern coast of Sardinia. The 'Sardinia cold-water coral province' is characterized in the Nora canyon by a spectacular coral growth dominated by the branching scleractinian Madrepora oculata at a depth of 380-460 m. The general biohermal frame is strengthened by the common occurrence of the solitary scleractinian Desmophyllum dianthus and the occasional presence of Lophelia pertusa. As documented by Remotely Operated Vehicle survey, this area is a hotspot of megafaunal diversity hosting among other also live specimens of the deep oyster Neopycnodonte zibrowii. The new coral province is located between the central Mediterranean CWC provinces (Bari Canyon, Santa Maria di Leuca, South Malta) and the western and northern ones (Melilla, Catalan-Provençal-Ligurian canyons). As for all the best developed CWC situations in the present Mediterranean Sea, the new Sardinian province is clearly influenced by Levantine Intermediate Water which appears to be a main driver for CWC distribution and viability in this basin.

  3. Transcriptomes and expression profiling of deep-sea corals from the Red Sea provide insight into the biology of azooxanthellate corals

    KAUST Repository

    Yum, Lauren

    2017-07-19

    Despite the importance of deep-sea corals, our current understanding of their ecology and evolution is limited due to difficulties in sampling and studying deep-sea environments. Moreover, a recent re-evaluation of habitat limitations has been suggested after characterization of deep-sea corals in the Red Sea, where they live at temperatures of above 20 °C at low oxygen concentrations. To gain further insight into the biology of deep-sea corals, we produced reference transcriptomes and studied gene expression of three deep-sea coral species from the Red Sea, i.e. Dendrophyllia sp., Eguchipsammia fistula, and Rhizotrochus typus. Our analyses suggest that deep-sea coral employ mitochondrial hypometabolism and anaerobic glycolysis to manage low oxygen conditions present in the Red Sea. Notably, we found expression of genes related to surface cilia motion that presumably enhance small particle transport rates in the oligotrophic deep-sea environment. This is the first study to characterize transcriptomes and in situ gene expression for deep-sea corals. Our work offers several mechanisms by which deep-sea corals might cope with the distinct environmental conditions present in the Red Sea As such, our data provide direction for future research and further insight to organismal response of deep-sea coral to environmental change and ocean warming.

  4. Transcriptomes and expression profiling of deep-sea corals from the Red Sea provide insight into the biology of azooxanthellate corals.

    Science.gov (United States)

    Yum, Lauren K; Baumgarten, Sebastian; Röthig, Till; Roder, Cornelia; Roik, Anna; Michell, Craig; Voolstra, Christian R

    2017-07-25

    Despite the importance of deep-sea corals, our current understanding of their ecology and evolution is limited due to difficulties in sampling and studying deep-sea environments. Moreover, a recent re-evaluation of habitat limitations has been suggested after characterization of deep-sea corals in the Red Sea, where they live at temperatures of above 20 °C at low oxygen concentrations. To gain further insight into the biology of deep-sea corals, we produced reference transcriptomes and studied gene expression of three deep-sea coral species from the Red Sea, i.e. Dendrophyllia sp., Eguchipsammia fistula, and Rhizotrochus typus. Our analyses suggest that deep-sea coral employ mitochondrial hypometabolism and anaerobic glycolysis to manage low oxygen conditions present in the Red Sea. Notably, we found expression of genes related to surface cilia motion that presumably enhance small particle transport rates in the oligotrophic deep-sea environment. This is the first study to characterize transcriptomes and in situ gene expression for deep-sea corals. Our work offers several mechanisms by which deep-sea corals might cope with the distinct environmental conditions present in the Red Sea As such, our data provide direction for future research and further insight to organismal response of deep-sea coral to environmental change and ocean warming.

  5. Transcriptomes and expression profiling of deep-sea corals from the Red Sea provide insight into the biology of azooxanthellate corals

    KAUST Repository

    Yum, Lauren; Baumgarten, Sebastian; Rö thig, Till; Roder, Cornelia; Roik, Anna Krystyna; Michell, Craig; Voolstra, Christian R.

    2017-01-01

    Despite the importance of deep-sea corals, our current understanding of their ecology and evolution is limited due to difficulties in sampling and studying deep-sea environments. Moreover, a recent re-evaluation of habitat limitations has been suggested after characterization of deep-sea corals in the Red Sea, where they live at temperatures of above 20 °C at low oxygen concentrations. To gain further insight into the biology of deep-sea corals, we produced reference transcriptomes and studied gene expression of three deep-sea coral species from the Red Sea, i.e. Dendrophyllia sp., Eguchipsammia fistula, and Rhizotrochus typus. Our analyses suggest that deep-sea coral employ mitochondrial hypometabolism and anaerobic glycolysis to manage low oxygen conditions present in the Red Sea. Notably, we found expression of genes related to surface cilia motion that presumably enhance small particle transport rates in the oligotrophic deep-sea environment. This is the first study to characterize transcriptomes and in situ gene expression for deep-sea corals. Our work offers several mechanisms by which deep-sea corals might cope with the distinct environmental conditions present in the Red Sea As such, our data provide direction for future research and further insight to organismal response of deep-sea coral to environmental change and ocean warming.

  6. Coral Reef Biological Criteria

    Science.gov (United States)

    Coral reefs worldwide are experiencing decline from a variety of stressors. Some important stressors are land-based sources of pollution and human activities in the coastal zone. However, few tools are available to offset the impact of these stressors. The Clean Water Act (CWA...

  7. Raiding the Coral Nurseries?

    Directory of Open Access Journals (Sweden)

    Alison M. Jones

    2011-08-01

    Full Text Available A recent shift in the pattern of commercial harvest in the Keppel Island region of the southern inshore Great Barrier Reef raises concern about the depletion of a number of relatively rare restricted range taxa. The shift appears to be driven by demand from the United States (US for corals for domestic aquaria. Data from the annual status reports from the Queensland Coral Fishery were compared with export trade data to the US from the Convention on International Trade in Endangered Species (CITES. Evidence was found of recent increases in the harvest of species from the Mussidae family (Acanthastrea spp. which appears to be largely driven by demand from the US. On present trends, the industry runs the risk of localized depletion of Blastomussa and Scolymia; evidenced by an increase in the harvest of small specimens and the trend of decreasing harvest despite a concurrent increase in demand. Considering their relatively high sediment tolerance compared to other reef-building species, and the current lack of information about their functional role in reef stability, the trend raises concerns about the impact of the harvest on local coral communities. The recent shift in harvest patterns could have impacts on slow-growing species by allowing harvest beyond the rate of population regeneration. In light of these factors, combined with the value of such species to local tourism, a commercial coral fishery based on uncommon but highly sought-after species may not be ecologically sustainable or economically viable in the Keppels.

  8. First case report of staghorn calculi successfully removed by mini-endoscopic combined intrarenal surgery in a 2-year-old boy.

    Science.gov (United States)

    Taguchi, Kazumi; Hamamoto, Shuzo; Okada, Atsushi; Mizuno, Kentaro; Tozawa, Keiichi; Hayashi, Yutaro; Kohri, Kenjiro; Yasui, Takahiro

    2015-10-01

    Less-invasive therapy for pediatric urolithiasis is available due to the miniaturization of equipment and improved optics; however, surgical treatment strategies, especially for large calculi, remain controversial. We describe here our experience of treating a 2-year-old boy with left renal staghorn calculi with a single session of mini-endoscopic combined intrarenal surgery in the prone split-leg position with pre-ureteral stenting and the directional enhanced flow imaging ultrasound technique. This is the first report of successful pediatric mini-endoscopic combined intrarenal surgery without any major complications. We believe this technique provides an important therapeutic option for large renal calculus in pediatric patients. © 2015 The Japanese Urological Association.

  9. Cold-water coral mounds on the Pen Duick Escarpment, Gulf of Cadiz: The MiCROSYSTEMS project approach

    NARCIS (Netherlands)

    Van Rooij, D.; Blamart, D.; De Mol, L.; Mienis, F.; Pirlet, H.; Wehrmann, L. M.; Barbieri, R.; Maignien, L.; Templer, S. P.; de Haas, H.; Hebbeln, D.; Frank, N.; Larmagnat, S.; Stadnitskaia, A.; Stivaletta, N.; van Weering, T.; Zhang, Y.; Hamoumi, N.; Cnudde, V.; Duyck, P.; Henriet, J.-P.; The MiCROSYSTEMS MD 169 Shipboard Party

    2011-01-01

    Here we present a case study of three cold-water coral mounds in a juvenile growth stage on top of the Pen Duick Escarpment in the Gulf of Cadiz; Alpha, Beta and Gamma mounds. Although cold-water corals are a common feature on the adjacent cliffs, mud volcanoes and open slope, no actual living

  10. Seaweed-coral interactions: variance in seaweed allelopathy, coral susceptibility, and potential effects on coral resilience.

    Directory of Open Access Journals (Sweden)

    Roberta M Bonaldo

    Full Text Available Tropical reefs are in global decline with seaweeds commonly replacing corals. Negative associations between macroalgae and corals are well documented, but the mechanisms involved, the dynamics of the interactions, and variance in effects of different macroalgal-coral pairings are poorly investigated. We assessed the frequency, magnitude, and dynamics of macroalgal-coral competition involving allelopathic and non-allelopathic macroalgae on three, spatially grouped pairs of no-take Marine Protected Areas (MPAs and non-MPAs in Fiji. In non-MPAs, biomass of herbivorous fishes was 70-80% lower, macroalgal cover 4-9 fold higher, macroalgal-coral contacts 5-15 fold more frequent and 23-67 fold more extensive (measured as % of colony margin contacted by macroalgae, and coral cover 51-68% lower than in MPAs. Coral contacts with allelopathic macroalgae occurred less frequently than expected by chance across all sites, while contact with non-allelopathic macroalgae tended to occur more frequently than expected. Transplants of allelopathic macroalgae (Chlorodesmis fastigiata and Galaxaura filamentosa against coral edges inflicted damage to Acropora aspera and Pocillopora damicornis more rapidly and extensively than to Porites cylindrica and Porites lobata, which appeared more resistant to these macroalgae. Montipora digitata experienced intermediate damage. Extent of damage from macroalgal contact was independent of coral colony size for each of the 10 macroalgal-coral pairings we established. When natural contacts with Galaxaura filamentosa were removed in the field, recovery was rapid for Porites lobata, but Pocillopora damicornis did not recover and damage continued to expand. As macroalgae increase on overfished tropical reefs, allelopathy could produce feedbacks that suppress coral resilience, prevent coral recovery, and promote the stability of algal beds in habitats previously available to corals.

  11. U.S. coral reefs; imperiled national treasures

    Science.gov (United States)

    Field, M.E.; Cochran, S.A.; Evans, K.R.

    2002-01-01

    Coral reefs are home to 25% of all marine species. However, the tiny colonial animals that build these intricate limestone masses are dying at alarming rates. If this trend continues, in 20 years the living corals on many of the world's reefs will be dead and the ecosystems that depend on them severely damaged. As part of the effort to protect our Nation's extensive reefs, U.S. Geological Survey (USGS) scientists are working to better understand the processes that affect the health of these ecologically and economically important ecosystems.

  12. Hybridization and the evolution of reef coral diversity.

    Science.gov (United States)

    Vollmer, Steven V; Palumbi, Stephen R

    2002-06-14

    Hundreds of coral species coexist sympatrically on reefs, reproducing in mass-spawning events where hybridization appears common. In the Caribbean, DNA sequence data from all three sympatric Acropora corals show that mass spawning does not erode species barriers. Species A. cervicornis and A. palmata are distinct at two nuclear loci or share ancestral alleles. Morphotypes historically given the name Acropora prolifera are entirely F(1) hybrids of these two species, showing morphologies that depend on which species provides the egg for hybridization. Although selection limits the evolutionary potential of hybrids, F(1) individuals can reproduce asexually and form long-lived, potentially immortal hybrids with unique morphologies.

  13. Is Acropora palmata (elkhorn coral) making a comeback in the Virgin Islands?

    Science.gov (United States)

    Rogers, Caroline S.

    2000-01-01

    White band disease (WBD) ravaged Acropora palmata (elkhorn coral) on many coral reefs in the Caribbean in the late 1970’s and 1980’s, including those around St. John and St. Croix, U. S. Virgin Islands—USVI (Gladfelter 1982, Rogers 1985). Quantitative data, photographs, and anecdotal observations indicate WBD killed large stands of elkhorn coral in the USVI from about 1976 until sometime in the late 1980’s. Branching Acroporid species, which are most susceptible to WBD, are also the most vulnerable to storm damage (Rogers et al. 1982). Since 1979, eight hurricanes have passed near or over the USVI. Because elkhorn coral contributed most of the living coral and determined the physical structure of many shallow reef zones, its demise dramatically altered many areas. But now, some of the reefs in the Virgin Islands once again have large, actively growing colonies of this important, reef-building species.

  14. Coral reef fish predator maintains olfactory acuity in degraded coral habitats.

    Directory of Open Access Journals (Sweden)

    Michael Natt

    Full Text Available Coral reefs around the world are rapidly degrading due to a range of environmental stressors. Habitat degradation modifies the sensory landscape within which predator-prey interactions occur, with implications for olfactory-mediated behaviours. Predator naïve settlement-stage damselfish rely on conspecific damage-released odours (i.e., alarm odours to inform risk assessments. Yet, species such as the Ambon damselfish, Pomacentrus amboinensis, become unable to respond appropriately to these cues when living in dead-degraded coral habitats, leading to increased mortality through loss of vigilance. Reef fish predators also rely on odours from damaged prey to locate, assess prey quality and engage in prey-stealing, but it is unknown whether their responses are also modified by the change to dead-degraded coral habitats. Implications for prey clearly depend on how their predatory counterparts are affected, therefore the present study tested whether olfactory-mediated foraging responses in the dusky dottyback, Pseudochromis fuscus, a common predator of P. amboinensis, were similarly affected by coral degradation. A y-maze was used to measure the ability of Ps. fuscus to detect and move towards odours, against different background water sources. Ps. fuscus were exposed to damage-released odours from juvenile P. amboinensis, or a control cue of seawater, against a background of seawater treated with either healthy or dead-degraded hard coral. Predators exhibited an increased time allocation to the chambers of y-mazes injected with damage-released odours, with comparable levels of response in both healthy and dead-degraded coral treated waters. In control treatments, where damage-released odours were replaced with a control seawater cue, fish showed no increased preference for either chamber of the y-maze. Our results suggest that olfactory-mediated foraging behaviours may persist in Ps. fuscus within dead-degraded coral habitats. Ps. fuscus may

  15. [Community structure of zooxanthellate corals (Anthozoa: Scleractinia) in Carrizales coral reef, Pacific coast, Mexico].

    Science.gov (United States)

    Reyes-Bonilla, Hector; Escobosa-González, Laura Elena; Cupul-Magaña, Amilcar L; Medina-Rosas, Pedro; Calderón-Aguilera, Luis E

    2013-06-01

    Coral reefs in the Mexican Pacific and notably those of the continental coastline of Colima state are still poorly studied. Fortunately, recent efforts have been carried out by researchers from different Mexican institutions to fill up these information gaps. The aim of this study was to determine the ecological structure of the rich and undisturbed coral building communities of Carrizales by using the point transect interception method (25m-long). For this, three survey expeditions were conducted between June and October 2005 and September 2006; and for comparison purposes, the reef was subdivided according to its position in the bay, and depth (0 to 5 m, and 6 to 10 m). Thirteen coral species were observed in the area, with Pocillopora verrucosa as the most abundant, contributing up to 32.8% of total cover, followed by Porites panamensis and Pocillopora capitata with 11% and 7%, respectively. Other species, Pocillopora damicornis, Pavona gigantea, Pocillopora eydouxi and Pocillopora inflata accounted for 1.5% to 2% of coral cover whereas the remaining five species had cover of less than 1%. Seven of the observed species represented new records for Colima state coastline: Pocillopora eydouxi, P inflata, P meandrina, Pavona duerdeni, P varians, Psammocora stellata and P contigua. This last species is a relevant record, because it has never been observed before in the Eastern Pacific. Although there was no significant difference (ANOVA, p = 0.478) neither in the abundance between the sides of the bay, nor between the depths considered, and the shallow zone observed the higher coral cover. Live coral cover was up to 61%, one of the highest ever reported for the Mexican Pacific, including the Gulf of California. The observed values of diversity (H' = 0.44 +/- 0.02), uniformity (J' = 0.76 +/- 0.02), and taxonomic distinctness index (delta* = 45.87 +/- 3.16), showed that currently this is the most important coral reef of Colima coastline. Currently, this region does not

  16. Skeletal records of community-level bleaching in Porites corals from Palau

    Science.gov (United States)

    Barkley, Hannah C.; Cohen, Anne L.

    2016-12-01

    Tropical Pacific sea surface temperature is projected to rise an additional 2-3 °C by the end of this century, driving an increase in the frequency and intensity of coral bleaching. With significant global coral reef cover already lost due to bleaching-induced mortality, efforts are underway to identify thermally tolerant coral communities that might survive projected warming. Massive, long-lived corals accrete skeletal bands of anomalously high density in response to episodes of thermal stress. These "stress bands" are potentially valuable proxies for thermal tolerance, but to date their application to questions of community bleaching history has been limited. Ecological surveys recorded bleaching of coral communities across the Palau archipelago during the 1998 and 2010 warm events. Between 2011 and 2015, we extracted skeletal cores from living Porites colonies at 10 sites spanning barrier reef and lagoon environments and quantified the proportion of stress bands present in each population during bleaching years. Across Palau, the prevalence of stress bands tracked the severity of thermal stress, with more stress bands occurring in 1998 (degree heating weeks = 13.57 °C-week) than during the less severe 2010 event (degree heating weeks = 4.86 °C-week). Stress band prevalence also varied by reef type, as more corals on the exposed barrier reef formed stress bands than did corals from sheltered lagoon environments. Comparison of Porites stress band prevalence with bleaching survey data revealed a strong correlation between percent community bleaching and the proportion of colonies with stress bands in each year. Conversely, annual calcification rates did not decline consistently during bleaching years nor did annually resolved calcification histories always track interannual variability in temperature. Our data suggest that stress bands in massive corals contain valuable information about spatial and temporal trends in coral reef bleaching and can aid in

  17. Coral reefs as buffers during the 2009 South Pacific tsunami, Upolu Island, Samoa

    Science.gov (United States)

    McAdoo, Brian G.; Ah-Leong, Joyce Samuelu; Bell, Lui; Ifopo, Pulea; Ward, Juney; Lovell, Edward; Skelton, Posa

    2011-07-01

    The coral reef bordering the coastline of Samoa affected by the 29 September 2009 tsunami provides a variety of ecosystem services — from nurseries for fisheries and inshore source of food for local communities, to aesthetics for tourists, and the width of the lagoon may have been a factor in reducing the onshore wave height. To understand the complex interactions between the onshore human population and the offshore coral, we formed an interdisciplinary survey team to document the effects the tsunami had on the nearshore coral reef, and how these changes might affect local inhabitants. The scale of reef damage varied from severe, where piles of freshly-killed coral fragments and mortality were present, to areas that exhibited little impact, despite being overrun by the tsunami. We found that many coral colonies were impacted by tsunami-entrained coral debris, which had been ripped up and deposited on the fore reef by repeated cyclones and storm waves. In other places, large surface area tabular coral sustained damage as the tsunami velocity increased as it was funneled through channels. Areas that lacked debris entrained by the waves as well as areas in the lee of islands came through relatively unscathed, with the exception of the delicate corals that lived on a sandy substrate. In the lagoon on the south coast with its steep topography, coral colonies were damaged by tsunami-generated debris from onshore entrained in the backwash. Despite the potential for severe tsunami-related damage, there were no noticeable decreases in live coral cover between successive surveys at two locations, although algal cover was higher with the increased nutrients mobilized by the tsunami. While there was an immediate decrease in fish takes in the month following the tsunami, when supporting services were likely impacted, both volume and income have rapidly increased to pre-tsunami levels. Long-term monitoring should be implemented to determine if nursery services were affected.

  18. Shared skeletal support in a coral-hydroid symbiosis.

    Directory of Open Access Journals (Sweden)

    Olga Pantos

    Full Text Available Hydroids form symbiotic relationships with a range of invertebrate hosts. Where they live with colonial invertebrates such as corals or bryozoans the hydroids may benefit from the physical support and protection of their host's hard exoskeleton, but how they interact with them is unknown. Electron microscopy was used to investigate the physical interactions between the colonial hydroid Zanclea margaritae and its reef-building coral host Acropora muricata. The hydroid tissues extend below the coral tissue surface sitting in direct contact with the host's skeleton. Although this arrangement provides the hydroid with protective support, it also presents problems of potential interference with the coral's growth processes and exposes the hydroid to overgrowth and smothering. Desmocytes located within the epidermal layer of the hydroid's perisarc-free hydrorhizae fasten it to the coral skeleton. The large apical surface area of the desmocyte and high bifurcation of the distal end within the mesoglea, as well as the clustering of desmocytes suggests that a very strong attachment between the hydroid and the coral skeleton. This is the first study to provide a detailed description of how symbiotic hydroids attach to their host's skeleton, utilising it for physical support. Results suggest that the loss of perisarc, a characteristic commonly associated with symbiosis, allows the hydroid to utilise desmocytes for attachment. The use of these anchoring structures provides a dynamic method of attachment, facilitating detachment from the coral skeleton during extension, thereby avoiding overgrowth and smothering enabling the hydroid to remain within the host colony for prolonged periods of time.

  19. Thermal refugia against coral bleaching throughout the northern Red Sea

    KAUST Repository

    Osman, Eslam O.

    2017-10-17

    Tropical reefs have been impacted by thermal anomalies caused by global warming that induced coral bleaching and mortality events globally. However, there have only been very few recordings of bleaching within the Red Sea despite covering a latitudinal range of 15° and consequently it has been considered a region that is less sensitive to thermal anomalies. We therefore examined historical patterns of sea surface temperature (SST) and associated anomalies (1982–2012) and compared warming trends with a unique compilation of corresponding coral bleaching records from throughout the region. These data indicated that the northern Red Sea has not experienced mass bleaching despite intensive Degree Heating Weeks (DHW) of >15°C-weeks. Severe bleaching was restricted to the central and southern Red Sea where DHWs have been more frequent, but far less intense (DHWs <4°C-weeks). A similar pattern was observed during the 2015–2016 El Niño event during which time corals in the northern Red Sea did not bleach despite high thermal stress (i.e. DHWs >8°C-weeks), and bleaching was restricted to the central and southern Red Sea despite the lower thermal stress (DHWs < 8°C-weeks). Heat stress assays carried out in the northern (Hurghada) and central (Thuwal) Red Sea on four key reef-building species confirmed different regional thermal susceptibility, and that central Red Sea corals are more sensitive to thermal anomalies as compared to those from the north. Together, our data demonstrate that corals in the northern Red Sea have a much higher heat tolerance than their prevailing temperature regime would suggest. In contrast, corals from the central Red Sea are close to their thermal limits, which closely match the maximum annual water temperatures. The northern Red Sea harbours reef-building corals that live well below their bleaching thresholds and thus we propose that the region represents a thermal refuge of global importance.

  20. Thermal refugia against coral bleaching throughout the northern Red Sea

    KAUST Repository

    Osman, Eslam O.; Smith, David J.; Ziegler, Maren; Kü rten, Benjamin; Conrad, Constanze; El-Haddad, Khaled M.; Voolstra, Christian R.; Suggett, David J.

    2017-01-01

    Tropical reefs have been impacted by thermal anomalies caused by global warming that induced coral bleaching and mortality events globally. However, there have only been very few recordings of bleaching within the Red Sea despite covering a latitudinal range of 15° and consequently it has been considered a region that is less sensitive to thermal anomalies. We therefore examined historical patterns of sea surface temperature (SST) and associated anomalies (1982–2012) and compared warming trends with a unique compilation of corresponding coral bleaching records from throughout the region. These data indicated that the northern Red Sea has not experienced mass bleaching despite intensive Degree Heating Weeks (DHW) of >15°C-weeks. Severe bleaching was restricted to the central and southern Red Sea where DHWs have been more frequent, but far less intense (DHWs <4°C-weeks). A similar pattern was observed during the 2015–2016 El Niño event during which time corals in the northern Red Sea did not bleach despite high thermal stress (i.e. DHWs >8°C-weeks), and bleaching was restricted to the central and southern Red Sea despite the lower thermal stress (DHWs < 8°C-weeks). Heat stress assays carried out in the northern (Hurghada) and central (Thuwal) Red Sea on four key reef-building species confirmed different regional thermal susceptibility, and that central Red Sea corals are more sensitive to thermal anomalies as compared to those from the north. Together, our data demonstrate that corals in the northern Red Sea have a much higher heat tolerance than their prevailing temperature regime would suggest. In contrast, corals from the central Red Sea are close to their thermal limits, which closely match the maximum annual water temperatures. The northern Red Sea harbours reef-building corals that live well below their bleaching thresholds and thus we propose that the region represents a thermal refuge of global importance.

  1. Dark production of extracellular superoxide by the coral Porites astreoides and representative symbionts

    Directory of Open Access Journals (Sweden)

    Tong Zhang

    2016-11-01

    Full Text Available The reactive oxygen species (ROS superoxide has been implicated in both beneficial and detrimental processes in coral biology, ranging from pathogenic disease resistance to coral bleaching. Despite the critical role of ROS in coral health, there is a distinct lack of ROS measurements and thus an incomplete understanding of underpinning ROS sources and production mechanisms within coral systems. Here, we quantified in situ extracellular superoxide concentrations at the surfaces of aquaria-hosted Porites astreoides during a diel cycle. High concentrations of superoxide (~10’s of nM were present at coral surfaces, and these levels did not change significantly as a function of time of day. These results indicate that the coral holobiont produces extracellular superoxide in the dark, independent of photosynthesis. As a short-lived anion at physiological pH, superoxide has a limited ability to cross intact biological membranes. Further, removing surface mucus layers from the P. astreoides colonies did not impact external superoxide concentrations. We therefore attribute external superoxide derived from the coral holobiont under these conditions to the activity of the coral host epithelium, rather than mucus-derived epibionts or internal sources such as endosymbionts (e.g., Symbiodinium. However, endosymbionts likely contribute to internal ROS levels via extracellular superoxide production. Indeed, common coral symbionts, including multiple strains of Symbiodinium (clades A to D and the bacterium Endozoicomonas montiporae LMG 24815, produced extracellular superoxide in the dark and at low light levels. Further, representative P. astreoides symbionts, Symbiodinium CCMP2456 (clade A and E. montiporae, produced similar concentrations of superoxide alone and in combination with each other, in the dark and low light, and regardless of time of day. Overall, these results indicate that healthy, non-stressed P. astreoides and representative symbionts produce

  2. Temperature and vital effect controls on Bamboo coral (Isididae) isotopegeochemistry: A test of the "lines method"

    Energy Technology Data Exchange (ETDEWEB)

    Hill, T M; Spero, H J; Guilderson, T P; LaVigne, M; Clague, D; Macalello, S; Jang, N

    2011-03-01

    Deep-sea bamboo corals hold promise as long-term climatic archives, yet little information exists linking bamboo coral geochemistry to measured environmental parameters. This study focuses on a suite of 10 bamboo corals collected from the Pacific and Atlantic basins (250-2136 m water depth) to investigate coral longevity, growth rates, and isotopic signatures. Calcite samples for stable isotopes and radiocarbon were collected from the base the corals, where the entire history of growth is recorded. In three of the coral specimens, samples were also taken from an upper branch for comparison. Radiocarbon and growth band width analyses indicate that the skeletal calcite precipitates from ambient dissolved inorganic carbon and that the corals live for 150-300 years, with extension rates of 9-128 {micro}m/yr. A linear relationship between coral calcite {delta}{sup 18}O and {delta}{sup 13}C indicates that the isotopic composition is influenced by vital effects ({delta}{sup 18}O:{delta}{sup 13}C slope of 0.17-0.47). As with scleractinian deep-sea corals, the intercept from a linear regression of {delta}{sup 18}O versus {delta}{sup 13}C is a function of temperature, such that a reliable paleotemperature proxy can be obtained, using the 'lines method.' Although the coral calcite {delta}{sup 18}O:{delta}{sup 13}C slope is maintained throughout the coral base ontogeny, the branches and central cores of the bases exhibit {delta}{sup 18}O:{delta}{sup 13}C values that are shifted far from equilibrium. We find that a reliable intercept value can be derived from the {delta}{sup 18}O:{delta}{sup 13}C regression of multiple samples distributed throughout one specimen or from multiple samples within individual growth bands.

  3. Habitat dynamics, marine reserve status, and the decline and recovery of coral reef fish communities

    Science.gov (United States)

    Williamson, David H; Ceccarelli, Daniela M; Evans, Richard D; Jones, Geoffrey P; Russ, Garry R

    2014-01-01

    Severe climatic disturbance events often have major impacts on coral reef communities, generating cycles of decline and recovery, and in some extreme cases, community-level phase shifts from coral-to algal-dominated states. Benthic habitat changes directly affect reef fish communities, with low coral cover usually associated with low fish diversity and abundance. No-take marine reserves (NTRs) are widely advocated for conserving biodiversity and enhancing the sustainability of exploited fish populations. Numerous studies have documented positive ecological and socio-economic benefits of NTRs; however, the ability of NTRs to ameliorate the effects of acute disturbances on coral reefs has seldom been investigated. Here, we test these factors by tracking the dynamics of benthic and fish communities, including the important fishery species, coral trout (Plectropomus spp.), over 8 years in both NTRs and fished areas in the Keppel Island group, Great Barrier Reef, Australia. Two major disturbances impacted the reefs during the monitoring period, a coral bleaching event in 2006 and a freshwater flood plume in 2011. Both disturbances generated significant declines in coral cover and habitat complexity, with subsequent declines in fish abundance and diversity, and pronounced shifts in fish assemblage structure. Coral trout density also declined in response to the loss of live coral, however, the approximately 2:1 density ratio between NTRs and fished zones was maintained over time. The only post-disturbance refuges for coral trout spawning stocks were within the NTRs that escaped the worst effects of the disturbances. Although NTRs had little discernible effect on the temporal dynamics of benthic or fish communities, it was evident that the post-disturbance refuges for coral trout spawning stocks within some NTRs may be critically important to regional-scale population persistence and recovery. PMID:24634720

  4. Augmenting the post-transplantation growth and survivorship of juvenile scleractinian corals via nutritional enhancement.

    Directory of Open Access Journals (Sweden)

    Tai Chong Toh

    Full Text Available Size-dependent mortality influences the recolonization success of juvenile corals transplanted for reef restoration and assisting juvenile corals attain a refuge size would thus improve post-transplantation survivorship. To explore colony size augmentation strategies, recruits of the scleractinian coral Pocillopora damicornis were fed with live Artemia salina nauplii twice a week for 24 weeks in an ex situ coral nursery. Fed recruits grew significantly faster than unfed ones, with corals in the 3600, 1800, 600 and 0 (control nauplii/L groups exhibiting volumetric growth rates of 10.65 ± 1.46, 4.69 ± 0.9, 3.64 ± 0.55 and 1.18 ± 0.37 mm3/week, respectively. Corals supplied with the highest density of nauplii increased their ecological volume by more than 74 times their initial size, achieving a mean final volume of 248.38 ± 33.44 mm3. The benefits of feeding were apparent even after transplantation to the reef. The corals in the 3600, 1800, 600 and 0 nauplii/L groups grew to final sizes of 4875 ± 260 mm3, 2036 ± 627 mm3, 1066 ± 70 mm3 and 512 ± 116 mm3, respectively. The fed corals had significantly higher survival rates than the unfed ones after transplantation (63%, 59%, 56% and 38% for the 3600, 1800, 600 and 0 nauplii/L treatments respectively. Additionally, cost-effectiveness analysis revealed that the costs per unit volumetric growth were drastically reduced with increasing feed densities. Corals fed with the highest density of nauplii were the most cost-effective (US$0.02/mm3, and were more than 12 times cheaper than the controls. This study demonstrated that nutrition enhancement can augment coral growth and post-transplantation survival, and is a biologically and economically viable option that can be used to supplement existing coral mariculture procedures and enhance reef restoration outcomes.

  5. Monitoring Coral Health to Determine Coral Bleaching Response at High Latitude Eastern Australian Reefs: An Applied Model for A Changing Climate

    Directory of Open Access Journals (Sweden)

    Andrew G. Carroll

    2011-09-01

    seaboard are highly susceptible to thermal stress; which, in turn, could lead to a future decline in total live coral cover if predicted rising seawater temperatures lead to more frequent coral bleaching events in future.

  6. Unrecognized coral species diversity masks differences in functional ecology.

    Science.gov (United States)

    Boulay, Jennifer N; Hellberg, Michael E; Cortés, Jorge; Baums, Iliana B

    2014-02-07

    Porites corals are foundation species on Pacific reefs but a confused taxonomy hinders understanding of their ecosystem function and responses to climate change. Here, we show that what has been considered a single species in the eastern tropical Pacific, Porites lobata, includes a morphologically similar yet ecologically distinct species, Porites evermanni. While P. lobata reproduces mainly sexually, P. evermanni dominates in areas where triggerfish prey on bioeroding mussels living within the coral skeleton, thereby generating asexual coral fragments. These fragments proliferate in marginal habitat not colonized by P. lobata. The two Porites species also show a differential bleaching response despite hosting the same dominant symbiont subclade. Thus, hidden diversity within these reef-builders has until now obscured differences in trophic interactions, reproductive dynamics and bleaching susceptibility, indicative of differential responses when confronted with future climate change.

  7. Red coral extinction risk enhanced by ocean acidification.

    Science.gov (United States)

    Cerrano, Carlo; Cardini, Ulisse; Bianchelli, Silvia; Corinaldesi, Cinzia; Pusceddu, Antonio; Danovaro, Roberto

    2013-01-01

    The red coral Corallium rubrum is a habitat-forming species with a prominent and structural role in mesophotic habitats, which sustains biodiversity hotspots. This precious coral is threatened by both over-exploitation and temperature driven mass mortality events. We report here that biocalcification, growth rates and polyps' (feeding) activity of Corallium rubrum are significantly reduced at pCO2 scenarios predicted for the end of this century (0.2 pH decrease). Since C. rubrum is a long-living species (>200 years), our results suggest that ocean acidification predicted for 2100 will significantly increases the risk of extinction of present populations. Given the functional role of these corals in the mesophotic zone, we predict that ocean acidification might have cascading effects on the functioning of these habitats worldwide.

  8. Assessing Coral Community Recovery from Coral Bleaching by ...

    African Journals Online (AJOL)

    The densities of small colonies were lowest at the northern sites, and small colonies of genera of corals that suffered from high bleaching and mortality during the El Niño Southern Oscillation in 1998 were less abundant in the north. These northern reefs are relatively isolated from sources of coral larvae from reefs in the ...

  9. Osmoadjustment in the Coral Holobiont

    KAUST Repository

    Röthig, Till

    2017-04-01

    Coral reefs are under considerable decline. The framework builders in coral reefs are scleractinian corals, which comprise so-called holobionts, consisting of cnidarian host, algal symbionts (genus Symbiodinium), and other associated microbes. Corals are commonly considered stenohaline osmoconformers, possessing limited capability to adjust to salinity changes. However, corals differ in their ability to cope with different salinities. The underlying mechanisms have not yet been addressed. To further understand putative mechanisms involved, I examined coral holobiont osmoregulation conducting a range of experiments on the coral Fungia granulosa. In my research F. granulosa from the Red Sea exhibited pronounced physiological reactions (decreased photosynthesis, cessation of calcification) upon short-term incubations (4 h) to high salinity (55). However, during a 29-day in situ salinity transect experiment, coral holobiont photosynthesis was unimpaired under high salinity (49) indicating acclimatization. F. granulosa microbiome changes after the 29-day high salinity exposure aligned with a bacterial community restructuring that putatively supports the coral salinity acclimatization (osmolyte synthesis, nutrient fixation/cycling). Long-term incubations (7 d) of cultured Symbiodinium exhibited cell growth even at ‘extreme’ salinity levels of 25 and 55. Metabolic profiles of four Symbiodinium strains exposed to increased (55) and decreased (25) salinities for 4 h indicated distinct carbohydrates and amino acids to be putatively involved in the osmoadjustment. Importantly, under high salinity the osmolyte floridoside was consistently increased. This could be corroborated in the coral model Aiptasia and in corals from the Persian/Arabian Gulf, where floridoside was also markedly increased upon short- (15 h) and long-term (>24 months) exposure to high salinity, confirming an important role of floridoside in the osmoadjustment of cnidarian holobionts. This thesis

  10. Trace metal anomalies in bleached Porites coral at Meiji Reef, tropical South China Sea

    Science.gov (United States)

    Li, Shu; Yu, Kefu; Zhao, Jianxin; Feng, Yuexing; Chen, Tianran

    2017-01-01

    Coral bleaching has generally been recognized as the main reason for tropical coral reef degradation, but there are few long-term records of coral bleaching events. In this study, trace metals including chromium (Cr), copper (Cu), molybdenum (Mo), manganese (Mn), lead (Pb), tin (Sn), titanium (Ti), vanadium (V), and yttrium (Y), were analyzed in two Porites corals collected from Meiji Reef in the tropical South China Sea (SCS) to assess differences in trace metal concentrations in bleached compared with unbleached coral growth bands. Ti, V, Cr, and Mo generally showed irregular fluctuations in both corals. Bleached layers contained high concentrations of Mn, Cu, Sn, and Pb. Unbleached layers showed moderately high concentrations of Mn and Cu only. The different distribution of trace metals in Porites may be attributable to different selectivity on the basis of vital utility or toxicity. Ti, V, Cr, and Mo are discriminated against by both coral polyps and zooxanthellae, but Mn, Cu, Sn, and Pb are accumulated by zooxanthellae and only Mn and Cu are accumulated by polyps as essential elements. The marked increase in Cu, Mn, Pb, and Sn are associated with bleaching processes, including mucus secretion, tissue retraction, and zooxanthellae expulsion and occlusion. Variation in these trace elements within the coral skeleton can be used as potential tracers of short-lived bleaching events.

  11. Phage and Nucleocytoplasmic Large Viral Sequences Dominate Coral Viromes from the Arabian Gulf.

    Science.gov (United States)

    Mahmoud, Huda; Jose, Liny

    2017-01-01

    Corals that naturally thrive under extreme conditions are gaining increasing attention due to their importance as living models to understand the impact of global warming on world corals. Here, we present the first metagenomic study of viral communities in corals thriving in a thermally variable water body in which the temperature fluctuates between 11 and 39°C in different seasons. The viral assemblages of two of the most abundant massive ( Porites harrisoni ) and branching ( Acropora downingi ) corals in offshore and inshore reef systems in the northern Arabian Gulf were investigated. Samples were collected from five reef systems during summer, autumn and winter of 2011/2012. The two coral viromes contain 12 viral families, including 10 dsDNA viral families [Siphoviridae, Podoviridae, Myoviridae, Phycodnaviridae, Baculoviridae, Herpesviridae, Adenoviridae, Alloherpesviridae, Mimiviridae and one unclassified family], one-ssDNA viral family (Microviridae) and one RNA viral family (Retroviridae). Overall, sequences significantly similar to Podoviridae were the most abundant in the P. harrisoni and A. downingi viromes. Various morphological types of virus-like particles (VLPs) were confirmed in the healthy coral tissue by transmission electron microscopy, including large tailless VLPs and electron-dense core VLPs. Tailed bacteriophages were isolated from coral tissue using a plaque assay. Higher functional gene diversity was recorded in A. downingi than in P. harrisoni , and comparative metagenomics revealed that the Gulf viral assemblages are functionally distinct from Pacific Ocean coral viral communities.

  12. Phage and Nucleocytoplasmic Large Viral Sequences Dominate Coral Viromes from the Arabian Gulf

    Directory of Open Access Journals (Sweden)

    Huda Mahmoud

    2017-10-01

    Full Text Available Corals that naturally thrive under extreme conditions are gaining increasing attention due to their importance as living models to understand the impact of global warming on world corals. Here, we present the first metagenomic study of viral communities in corals thriving in a thermally variable water body in which the temperature fluctuates between 11 and 39°C in different seasons. The viral assemblages of two of the most abundant massive (Porites harrisoni and branching (Acropora downingi corals in offshore and inshore reef systems in the northern Arabian Gulf were investigated. Samples were collected from five reef systems during summer, autumn and winter of 2011/2012. The two coral viromes contain 12 viral families, including 10 dsDNA viral families [Siphoviridae, Podoviridae, Myoviridae, Phycodnaviridae, Baculoviridae, Herpesviridae, Adenoviridae, Alloherpesviridae, Mimiviridae and one unclassified family], one-ssDNA viral family (Microviridae and one RNA viral family (Retroviridae. Overall, sequences significantly similar to Podoviridae were the most abundant in the P. harrisoni and A. downingi viromes. Various morphological types of virus-like particles (VLPs were confirmed in the healthy coral tissue by transmission electron microscopy, including large tailless VLPs and electron-dense core VLPs. Tailed bacteriophages were isolated from coral tissue using a plaque assay. Higher functional gene diversity was recorded in A. downingi than in P. harrisoni, and comparative metagenomics revealed that the Gulf viral assemblages are functionally distinct from Pacific Ocean coral viral communities.

  13. Phosphate deficiency promotes coral bleaching and is reflected by the ultrastructure of symbiotic dinoflagellates

    International Nuclear Information System (INIS)

    Rosset, Sabrina; Wiedenmann, Jörg; Reed, Adam J.; D'Angelo, Cecilia

    2017-01-01

    Enrichment of reef environments with dissolved inorganic nutrients is considered a major threat to the survival of corals living in symbiosis with dinoflagellates (Symbiodinium sp.). We argue, however, that the direct negative effects on the symbiosis are not necessarily caused by the nutrient enrichment itself but by the phosphorus starvation of the algal symbionts that can be caused by skewed nitrogen (N) to phosphorus (P) ratios. We exposed corals to imbalanced N:P ratios in long-term experiments and found that the undersupply of phosphate severely disturbed the symbiosis, indicated by the loss of coral biomass, malfunctioning of algal photosynthesis and bleaching of the corals. In contrast, the corals tolerated an undersupply with nitrogen at high phosphate concentrations without negative effects on symbiont photosynthesis, suggesting a better adaptation to nitrogen limitation. Transmission electron microscopy analysis revealed that the signatures of ultrastructural biomarkers represent versatile tools for the classification of nutrient stress in symbiotic algae. Notably, high N:P ratios in the water were clearly identified by the accumulation of uric acid crystals. - Highlights: • Undersupply with dissolved inorganic phosphate causes coral bleaching. • Ultrastructural biomarkers in algal symbionts identify nutrient stress in reef corals. • Uric acid crystals in zooxanthellae identify high N:P ratios in the water column. • Nitrate enrichment of the water causes phosphate deficiency in Symbiodinium. • Coral symbionts tolerate nitrogen limitation better than phosphorus limitation.

  14. Human disturbances on coral reefs in Sri Lanka: A case study

    Energy Technology Data Exchange (ETDEWEB)

    Oehman, M C; Linden, O [Stockholm Univ. (Sweden). Dept. of Zoology; Rajasuriya, A [NARA, Crow Island, Colombo (Sri Lanka)

    1993-01-01

    The degradation of coral reefs in Sri Lanka has increased substantially over the last decades. Human activities causing this degradation include: mining for lime production, sewage discharges, discharges of oil and other pollutants in connection with shipping and port activities, destructive fishing practices, land and mangrove destruction, tourism and the collecting of fauna such as fish, shells and corals. In this study, three adjacent coral reefs; Bar Reef, Talawila Reef, and Kandakuliya Reef, which are widely scattered patch reefs off Kalpitiya Peninsula, northwestern Sri Lanka, were surveyed and compared in terms of their fish and coral diversity and abundance as well as human and natural disturbances. Information was gathered by snorkeling in visual overview surveys and by scuba diving in detailed transect surveys. When each reef was ranked according to the extent of live coral cover, and chaetodontid diversity, the results indicated that Bar Reef was in excellent condition, Talawila Reef was intermediate, and Kandakuliya Reef was in poor condition. The diversity of coral genera, the topographic relief and the proportion of coral rubble, did not follow the same pattern. The number of coral genera found was 49, while 283 fish species belonging to 51 families were recorded. Human disturbance factors on the reefs were found to be net fishing, boat anchoring and ornamental fish collection for the aquarium trade. Bottom.set nylon nets in particular were found to have a very destructive impact on the bottom fauna. 33 refs, 7 figs, 1 tab

  15. Life on the edge: corals in mangroves and climate change

    Science.gov (United States)

    Rogers, Caroline S.; Herlan, James J.

    2012-01-01

    Coral diseases have played a major role in the degradation of coral reefs in the Caribbean, including those in the US Virgin Islands (USVI). In 2005, bleaching affected reefs throughout the Caribbean, and was especially severe on USVI reefs. Some corals began to regain their color as water temperatures cooled, but an outbreak of disease (primarily white plague) led to losses of over 60% of the total live coral cover. Montastraea annularis, the most abundant coral, was disproportionately affected, and decreased in relative abundance. The threatened species Acropora palmata bleached for the first time on record in the USVI but suffered less bleaching and less mortality from disease than M. annularis. Acropora palmata and M. annularis are the two most significant species in the USVI because of their structural role in the architecture of the reefs, the large size of their colonies, and their complex morphology. The future of the USVI reefs depends largely on their fate. Acropora palmata is more likely to recover than M. annularis for many reasons, including its faster growth rate, and its lower vulnerability to bleaching and disease.

  16. Fungal invasion of massive corals

    Digital Repository Service at National Institute of Oceanography (India)

    Raghukumar, C.; Raghukumar, S.

    Five species of corals from the Andaman Islands in the Bay of Bengal (Indian Ocean) have been regularly found to have single or multiple necrotic patches. The occurrence of such corals with necrotic patches varied from 10-50% in the field. Sections...

  17. Evidence of initial coral community recovery at Discovery Bay on Jamaica’s North Coast

    Directory of Open Access Journals (Sweden)

    M. James C. Crabbe

    2014-09-01

    Full Text Available Current challenges to coral reef sustainability include overfishing, destructive fishing practices, bleaching, acidification, sea-level rise, starfish, algae, agricultural run-off, coastal and resort development, pollution, diseases, invasive species and hurricanes. We used SCUBA belt transects to record coral cover and digital image analysis in the Dairy Bull Reef off the north coast of Jamaica and found that it is a positive example of how reefs can recover after major environmental disturbance. Live coral cover increased from 13±5% in 2006 to 31±7% in 2008, while live Acropora cervicornis increased from 2±2% in 2006 to 22±7% in 2008. Coral cover levels were maintained until 2012.

  18. The Biology and Economics of Coral Growth

    NARCIS (Netherlands)

    Osinga, R.; Schutter, M.; Griffioen, B.; Wijffels, R.H.; Verreth, J.A.J.; Shafit, S.; Henard, S.; Taruffi, M.; Gili, C.; Lavorano, S.

    2011-01-01

    To protect natural coral reefs, it is of utmost importance to understand how the growth of the main reef-building organisms-the zooxanthellate scleractinian corals-is controlled. Understanding coral growth is also relevant for coral aquaculture, which is a rapidly developing business. This review

  19. The influence of light and water flow on the growth and physiology of the scleractinian coral Galaxea fascicularis

    NARCIS (Netherlands)

    Schutter, M.

    2010-01-01

    Background
    Zooxanthellate scleractinian corals are sessile colonial animals that live in symbiosis with photosynthetic algae, the zooxanthellae. They can feed both phototrophically and heterotrophically and produce an external skeleton of calcium carbonate, which process is enhanced by light.

  20. [Progress of heterotrophic studies on symbiotic corals].

    Science.gov (United States)

    Yang, Yang-Chu-Qiao; Hong, Wen Ting; Wang, Shu Hong

    2017-12-01

    Heterotrophy of zooxanthellae symbiotic corals refers to the nutrition directly coming from food absorption, not the nutrition obtained from photosynthesis. Most ex situ propagation of symbiotic corals focused on the effects of irradiation, flow rate and water quality on corals, few of them involved in the demand and supply of coral heterotrophic nutrition. This paper reviewed the significance of heterotrophic nutrient supply to symbiotic corals from the sources of coral heterotrophic nutrition, the factors affecting the supply of coral heterotrophic nutrient, and the methods of how to study the coral heterotrophy. In general, the research of coral heterotrophy is just at the beginning stage, and future studies should focus on the inherent mechanism of coral feeding selection and developing more effective research methods.

  1. Coral reef bleaching: ecological perspectives

    Science.gov (United States)

    Glynn, P. W.

    1993-03-01

    Coral reef bleaching, the whitening of diverse invertebrate taxa, results from the loss of symbiotic zooxanthellae and/or a reduction in photosynthetic pigment concentrations in zooxanthellae residing within the gastrodermal tissues of host animals. Of particular concern are the consequences of bleaching of large numbers of reef-building scleractinian corals and hydrocorals. Published records of coral reef bleaching events from 1870 to the present suggest that the frequency (60 major events from 1979 to 1990), scale (co-occurrence in many coral reef regions and often over the bathymetric depth range of corals) and severity (>95% mortality in some areas) of recent bleaching disturbances are unprecedented in the scientific literature. The causes of small scale, isolated bleaching events can often be explained by particular stressors (e.g., temperature, salinity, light, sedimentation, aerial exposure and pollutants), but attempts to explain large scale bleaching events in terms of possible global change (e.g., greenhouse warming, increased UV radiation flux, deteriorating ecosystem health, or some combination of the above) have not been convincing. Attempts to relate the severity and extent of large scale coral reef bleaching events to particular causes have been hampered by a lack of (a) standardized methods to assess bleaching and (b) continuous, long-term data bases of environmental conditions over the periods of interest. An effort must be made to understand the impact of bleaching on the remainder of the reef community and the long-term effects on competition, predation, symbioses, bioerosion and substrate condition, all factors that can influence coral recruitment and reef recovery. If projected rates of sea warming are realized by mid to late AD 2000, i.e. a 2°C increase in high latitude coral seas, the upper thermal tolerance limits of many reef-building corals could be exceeded. Present evidence suggests that many corals would be unable to adapt

  2. Linking benthic hydrodynamics and cold-water coral occurrences: A high-resolution model study at three cold-water coral provinces in the NE Atlantic

    Science.gov (United States)

    Mohn, Christian; Rengstorf, Anna; White, Martin; Duineveld, Gerard; Mienis, Furu; Soetaert, Karline; Grehan, Anthony

    2014-03-01

    Observations from numerous cold-water coral locations in the NE Atlantic show energetic near-bottom flow dynamics along the European continental margin at individual coral mounds and mound clusters. Dynamics are largely controlled by tide-topography interaction generating and enhancing periodic motions such as trapped waves, freely propagating internal tides and internal hydraulic jumps. In this study, linkages between key abiotic parameters and cold water coral occurrences are explored across entire cold-water coral mound provinces using an integrated modelling and observational approach. The 3-D ocean circulation model ROMS-AGRIF was applied to simulate near-bottom hydrodynamic conditions at three provinces in the NE Atlantic (Logachev mounds, Arc mounds and Belgica mounds) adopting a nested model setup with a central grid resolution of 250 m. Simulations were carried out with a focus on accurate high-resolution topography and tidal forcing. The central model bathymetry was taken from high-resolution INSS (Irish National Seabed Survey) seafloor mapping data. The model was integrated over a full one-year reference period starting from the 1st January 2010. Interannual variability was not considered. Tidal forcing was obtained from a global solution of the Oregon State University (OSU) inverse tidal model. Modelled fields of benthic currents were validated against available independent in situ observations. Coral assemblage patterns (presence and absence locations) were obtained from benthic surveys of the EU FP7 CoralFISH programme and supplemented by data from additional field surveys. Modelled near-bottom currents, temperature and salinity were analysed for a 1-month subset (15th April to 15th May 2010) corresponding to the main CoralFISH survey period. The model results show intensified near-bottom currents in areas where living corals are observed by contrast with coral absence and random background locations. Instantaneous and time-mean current speeds at

  3. Autonomous Coral Reef Survey in Support of Remote Sensing

    Directory of Open Access Journals (Sweden)

    Steven G. Ackleson

    2017-10-01

    Full Text Available An autonomous surface vehicle instrumented with optical and acoustical sensors was deployed in Kane'ohe Bay, HI, U.S.A., to provide high-resolution, in situ observations of coral reef reflectance with minimal human presence. The data represented a wide range in bottom type, water depth, and illumination and supported more thorough investigations of remote sensing methods for identifying and mapping shallow reef features. The in situ data were used to compute spectral bottom reflectance and remote sensing reflectance, Rrs,λ, as a function of water depth and benthic features. The signals were used to distinguish between live coral and uncolonized sediment within the depth range of the measurements (2.5–5 m. In situRrs, λ were found to compare well with remotely sensed measurements from an imaging spectrometer, the Airborne Visible and Infrared Imaging Spectrometer (AVIRIS, deployed on an aircraft at high altitude. Cloud cover and in situ sensor orientation were found to have minimal impact on in situRrs, λ, suggesting that valid reflectance data may be collected using autonomous surveys even when atmospheric conditions are not favorable for remote sensing operations. The use of reflectance in the red and near infrared portions of the spectrum, expressed as the red edge height, REHλ, was investigated for detecting live aquatic vegetative biomass, including coral symbionts and turf algae. The REHλ signal from live coral was detected in Kane'ohe Bay to a depth of approximately 4 m with in situ measurements. A remote sensing algorithm based on the REHλ signal was defined and applied to AVIRIS imagery of the entire bay and was found to reveal areas of shallow, dense coral and algal cover. The peak wavelength of REHλ decreased with increasing water depth, indicating that a more complete examination of the red edge signal may potentially yield a remote sensing approach to simultaneously estimate vegetative biomass and bathymetry in shallow water.

  4. Coral diseases and bleaching on Colombian Caribbean coral reefs.

    Science.gov (United States)

    Navas-Camacho, Raúl; Gil-Agudelo, Diego Luis; Rodríguez-Ramírez, Alberto; Reyes-Nivia, María Catalina; Garzón-Ferreira, Jaime

    2010-05-01

    Since 1998 the National Monitoring System for the Coral Reefs of Colombia (SIMAC) has monitored the occurrence of coral bleaching and diseases in some Colombian coral reefs (permanent stations at San Andres Island, Rosario Islands, Tayrona, San Bernardo Islands and Urabá). The main purpose is to evaluate their health status and to understand the factors that have been contributing to their decline. To estimate these occurrences, annual surveys in 126 permanent belt transects (10 x 2m) with different depth intervals (3-6 meters, 9-12 meters and 15-18 meters) are performed at all reef sites. Data from the 1998-2004 period, revealed that San Andrés Island had many colonies with diseases (38.9 colonies/m2), and Urabá had high numbers with bleaching (54.4 colonies/m2). Of the seven reported coral diseases studied, Dark Spots Disease (DSD), and White Plague Disease (WPD) were noteworthy because they occurred in all Caribbean monitored sites, and because of their high interannual infection incidence. Thirty five species of scleractinian corals were affected by at least one disease and a high incidence of coral diseases on the main reef builders is documented. Bleaching was present in 34 species. During the whole monitoring period, Agaricia agaricites and Siderastrea siderea were the species most severely affected by DSD and bleaching, respectively. Diseases on species such as Agaricia fragilis, A. grahamae, A. humilis, Diploria clivosa, Eusmilia fastigiata, Millepora complanata, and Mycetophyllia aliciae are recorded for first time in Colombia. We present bleaching and disease incidences, kinds of diseases, coral species affected, reef localities studied, depth intervals of surveys, and temporal (years) variation for each geographic area. This variation makes difficult to clearly determine defined patterns or general trends for monitored reefs. This is the first long-term study of coral diseases and bleaching in the Southwestern Caribbean, and one of the few long

  5. Coral reproduction in Western Australia

    Science.gov (United States)

    Speed, Conrad W.; Babcock, Russ

    2016-01-01

    Larval production and recruitment underpin the maintenance of coral populations, but these early life history stages are vulnerable to extreme variation in physical conditions. Environmental managers aim to minimise human impacts during significant periods of larval production and recruitment on reefs, but doing so requires knowledge of the modes and timing of coral reproduction. Most corals are hermaphroditic or gonochoric, with a brooding or broadcast spawning mode of reproduction. Brooding corals are a significant component of some reefs and produce larvae over consecutive months. Broadcast spawning corals are more common and display considerable variation in their patterns of spawning among reefs. Highly synchronous spawning can occur on reefs around Australia, particularly on the Great Barrier Reef. On Australia’s remote north-west coast there have been fewer studies of coral reproduction. The recent industrial expansion into these regions has facilitated research, but the associated data are often contained within confidential reports. Here we combine information in this grey-literature with that available publicly to update our knowledge of coral reproduction in WA, for tens of thousands of corals and hundreds of species from over a dozen reefs spanning 20° of latitude. We identified broad patterns in coral reproduction, but more detailed insights were hindered by biased sampling; most studies focused on species of Acropora sampled over a few months at several reefs. Within the existing data, there was a latitudinal gradient in spawning activity among seasons, with mass spawning during autumn occurring on all reefs (but the temperate south-west). Participation in a smaller, multi-specific spawning during spring decreased from approximately one quarter of corals on the Kimberley Oceanic reefs to little participation at Ningaloo. Within these seasons, spawning was concentrated in March and/or April, and October and/or November, depending on the timing of

  6. 350 Year Cloud Reconstruction Deduced from Northeast Caribbean Coral Proxies

    Science.gov (United States)

    Winter, A.; Sammarco, P. W.; Mikolajewicz, U.; Jury, M.; Zanchettin, D.

    2014-12-01

    Clouds are a major factor influencing the global climate and its response to external forcing through their implications for the global hydrological cycle, and hence for the planetary radiative budget. Clouds also contribute to regional climates and their variability through, e.g., the changes they induce in regional precipitation patterns. There have been very few studies of decadal and longer-term changes in cloud cover in the tropics and sub-tropics, both over land and the ocean. In the tropics, there is great uncertainty regarding how global warming will affect cloud cover. Observational satellite data are too short to unambiguously discern any temporal trends in cloud cover. Corals generally live in well-mixed coastal regions and can often record environmental conditions of large areas of the upper ocean. This is particularly the case at low latitudes. Scleractinian corals are sessile, epibenthic fauna, and the type of environmental information recorded at the location where the coral has been living is dependent upon the species of coral considered and proxy index of interest. Skeletons of scleractinian corals are considered to provide among the best records of high-resolution (sub-annual) environmental variability in the tropical and sub-tropical oceans. Zooxanthellate hermatypic corals in tropical and sub-tropical seas precipitate CaCO3 skeletons as they grow. This growth is made possible through the manufacture of CaCO3crystals, facilitated by the zooxanthellae. During the process of crystallization, the holobiont binds carbon of different isotopes into the crystals. Stable carbon isotope concentrations vary with a variety of environmental conditions. In the Caribbean, d13C in corals of the species Montastraea faveolata can be used as a proxy for changes in cloud cover. In this contribution, we will demonstrate that the stable isotope 13C varies concomitantly with cloud cover for the northeastern Caribbean region. Using this proxy we have been able to

  7. Preliminary numerical simulation for shallow strata stability of coral reef in South China Sea

    Science.gov (United States)

    Tang, Qinqin; Zhan, Wenhuan; Zhang, Jinchang

    2017-04-01

    Coral reefs are the geologic material and special rock and soil, which live in shallow water of the tropic ocean and are formed through biological and geological action. Since infrastructure construction is being increasingly developed on coral reefs during recent years, it is necessary to evaluate the shallow strata stability of coral reefs in the South China Sea. The paper is to study the borehole profiles for shallow strata of coral reefs in the South China Sea, especially in the hydrodynamic marine environment?, and to establish a geological model for numerical simulation with Geo-Studio software. Five drilling holes show a six-layer shallow structure of South China Sea, including filling layer, mid-coarse sand, coral sand gravel, fine sand, limestone debris and reef limestone. The shallow coral reef profile next to lagoon is similar to "layers cake", in which the right side close to the sea is analogous to "block cake". The simulation results show that coral reef stability depends on wave loads and earthquake strength, as well as the physical properties of coral reefs themselves. The safety factor of the outer reef is greater than 10.0 in the static condition, indicating that outer reefs are less affected by the wave and earthquake. However, the safety factor next to lagoon is ranging from 0.1 to 4.9. The main reason for the variations that the strata of coral reefs close to the sea are thick. For example, the thickness of reef limestone is more than 10 m and equivalent to the block. When the thickness of inside strata is less than 10 m, they show weak engineering geological characteristics. These findings can provide useful information for coral reef constructions in future. This work was funded by National Basic Research Program of China (contract: 2013CB956104) and National Natural Science Foundation of China (contract: 41376063).

  8. Coral reef ecosystem

    Digital Repository Service at National Institute of Oceanography (India)

    Wafar, M.V.M.; Wafar, S.

    ), on submerged banks like Gave shani bank (13°24'N; 73°45'E) (Nair and Qasim 1978) andSidere~ko Bank (13°43.5' N; 73°42'E) (Rao 1972) and as stray individual units off Visakhapatnam (Bakus, G. personal communication) and Pondicherry (Ramesh, A. personal... communication). Fossil reefs, drowned as a result of the Holocene sea level rise, occur at 92, 85, 75 and 55 m depth along .. ~ !! ":2 0. ~ Figure 3.1 Graphical Representation of the SO-Box Model of a Caribbean Coral Reef Key: 1. Benthic producers. 2. Detritus...

  9. The Power of Three: Coral Reefs, Seagrasses and Mangroves Protect Coastal Regions and Increase Their Resilience.

    Science.gov (United States)

    Guannel, Greg; Arkema, Katie; Ruggiero, Peter; Verutes, Gregory

    2016-01-01

    Natural habitats have the ability to protect coastal communities against the impacts of waves and storms, yet it is unclear how different habitats complement each other to reduce those impacts. Here, we investigate the individual and combined coastal protection services supplied by live corals on reefs, seagrass meadows, and mangrove forests during both non-storm and storm conditions, and under present and future sea-level conditions. Using idealized profiles of fringing and barrier reefs, we quantify the services supplied by these habitats using various metrics of inundation and erosion. We find that, together, live corals, seagrasses, and mangroves supply more protection services than any individual habitat or any combination of two habitats. Specifically, we find that, while mangroves are the most effective at protecting the coast under non-storm and storm conditions, live corals and seagrasses also moderate the impact of waves and storms, thereby further reducing the vulnerability of coastal regions. Also, in addition to structural differences, the amount of service supplied by habitats in our analysis is highly dependent on the geomorphic setting, habitat location and forcing conditions: live corals in the fringing reef profile supply more protection services than seagrasses; seagrasses in the barrier reef profile supply more protection services than live corals; and seagrasses, in our simulations, can even compensate for the long-term degradation of the barrier reef. Results of this study demonstrate the importance of taking integrated and place-based approaches when quantifying and managing for the coastal protection services supplied by ecosystems.

  10. Biodiversity of Cryptofauna (Decapods) and Their Correlation with Dead Coral Pocillopora sp. Volume at Bunaken Island, North Sulawesi

    Science.gov (United States)

    Malik, Muhammad Danie Al; Kholilah, Nenik; Kurniasih, Eka Maya; Sembiring, Andrianus; Pertiwi, Ni Putu Dian; Ambariyanto, Ambariyanto; Munasik, Munasik; Meyer, Christopher

    2018-02-01

    Decapod is known as cryptofauna which is also important component of coral reef biodiversity. Dead corals are one of the area which usually used by decapods to live. This research aims to observe the diversity of cryptofauna (decapods) and the correlation between the number of decapods with the volume of dead corals. Ten dead corals, Pocillopora sp., were collected at 5 m depth at Bunaken Island. These dead corals were measured their volume and all decapods found were counted and identified up to family level. The richness and abundance were analyzed using ACE (Abundance-Based Coverage Estimates) and Chao 1. The results show that there were in total 474 decapods from 13 families found within all ten dead corals. Xanthidae was showed as the most abundance family among all, with 161 individual. Diversity index of decapods was found at medium category with value of 2.01. Rarefaction curve based on richness and abundance showed an estimation of 13 families. The result also indicated that the asymptote stage was reached on the 10th dead coral samples. The correlation between decapod with the volume of dead coral were showed significant positive correlation (r = 0.673, p<0.05). This result provides benefits to basic knowledge about diversity of decapod which one of cryptofauna as component fauna have a habitat on coral reef ecosystem.

  11. New perspectives on ecological mechanisms affecting coral recruitment on reefs

    NARCIS (Netherlands)

    Ritson-Williams, R.; Arnold, S.N.; Fogarty, N.D.; Steneck, R.S.; Vermeij, M.J.A.; Paul, V.J.

    2009-01-01

    Coral mortality has increased in recent decades, making coral recruitment more important than ever in sustaining coral reef ecosystems and contributing to their resilience. This review summarizes existing information on ecological factors affecting scleractinian coral recruitment. Successful

  12. Diversity And Abundance Of Deep-Water Coral Mounds In The Straits Of Florida: A Result of Adaptability To Local Environments?

    Science.gov (United States)

    Correa, T. B.; Grasmueck, M.; Eberli, G.; Viggiano, D. A.; Rosenberg, A.; Reed, J. K.

    2007-12-01

    To improve the understanding of the Florida-Bahamas deep-water coral mound ecosystem, Autonomous Underwater Vehicle (AUV) surveys were conducted on five coral mound fields throughout the Straits of Florida (three sites at the base of slope of Great Bahama Bank (GBB), one in the middle of the Straits (MS) and one at the base of the Miami Terrace (MT)) in water depths of 590 to 860 m. The AUV provides high-resolution bathymetric maps, sub-bottom profiles and oceanographic data. The AUV survey sites were subsequently groundtruthed via sample collection and video transects, using the Johnson Sealink submersible. Contrary to previous surveys, we found a high diversity in coral mound morphology between sites separated by 15 to 80 km. The MT site is characterized by sinusoidal coral mound ridges, while the MS site contains densely clustered small coral mounds. Meanwhile, mounds of the GBB region are better developed, with some individual mounds reaching up to 90 m in height. Benthic coverage of live corals also differs between sites; the GBB sites are characterized by mounds densely covered by large thickets of live corals, while small thickets of mostly dead corals dominate the MT and MS sites. Several environmental factors may explain these differences. For example, bottom current patterns change between sites. The MT and the MS sites have a unidirectional regime (southward or northward flow, respectively), whereas the GBB sites have a tidal current regime. Sedimentation patterns as depicted by sub-bottom profiles also vary between the sites; coral mounds in the GBB area appear to receive higher sediment input, which can significantly enhance mound growth rates as the reef framework baffles and traps mobile sediments. However, coral mounds that cannot keep-up with the sedimentation rate are buried. Therefore, in the high sedimentation areas of GBB, flourishing live coral mounds are limited to elevated positions (i.e. plateaus, ridges crests) where sediment accumulation

  13. Diversity of Coral Fish At Saebus Island, East Java, Indonesia

    Science.gov (United States)

    Fatimah, Siti; Putra, Tri Widya Laksana; Kondang, Putranto; Suratman; Gamelia, Larossa; Syahputra, Hendry; Rahmadayanti; Rizmaaadi, Mada; Ambariyanto, Ambariyanto

    2018-02-01

    Coral reef ecosystem is known as an important place to live various types of fish, where coral conditions will affect the diversity and abundance of the fish. In healthy coral reef ecosystems generally can be found many types of fish with high density. This research aims to investigate the diversity and abundance of coral fishes at Saebus Island, East Java. The observation conducted at 4 stations, according to cardinal point by UVS (underwater visual census) methods with belt transect with the visibility of 2,5 m horizontally, and 5 m vertically. The length of transect was 100 m parallel with coastline, with the area of observation is 500 m2. The censuses were conducted at 2 different depths (3 and 10 m). This study found 70 kinds of coral fish originated form 20 family at all stations. These fishes were from 3 different fish categories i.e. 7 target fishes, 13 indicator fishes, and 50 major fishes. Three different fishes that dominated target fish, indicator fish and major fish were Epinephelus fasciatus, Chaetodon baronessa and Aulostomus chinensis, respectively. There was similar value of fish diversity index at two different depths which were 3.635 and 3,623. While uniformity index at the depth of 3m was 0.153 and at 10m was 0.217, and domination index at the depth of 3m was 0.11 and at 10m was 0.167. These values suggest that diversity of coral fish at Saebus island can be categorized as high diversity.

  14. Local stressors reduce coral resilience to bleaching.

    Science.gov (United States)

    Carilli, Jessica E; Norris, Richard D; Black, Bryan A; Walsh, Sheila M; McField, Melanie

    2009-07-22

    Coral bleaching, during which corals lose their symbiotic dinoflagellates, typically corresponds with periods of intense heat stress, and appears to be increasing in frequency and geographic extent as the climate warms. A fundamental question in coral reef ecology is whether chronic local stress reduces coral resistance and resilience from episodic stress such as bleaching, or alternatively promotes acclimatization, potentially increasing resistance and resilience. Here we show that following a major bleaching event, Montastraea faveolata coral growth rates at sites with higher local anthropogenic stressors remained suppressed for at least 8 years, while coral growth rates at sites with lower stress recovered in 2-3 years. Instead of promoting acclimatization, our data indicate that background stress reduces coral fitness and resilience to episodic events. We also suggest that reducing chronic stress through local coral reef management efforts may increase coral resilience to global climate change.

  15. Fungi and their role in corals and coral reef ecosystems

    Digital Repository Service at National Institute of Oceanography (India)

    Raghukumar, C.; Ravindran, J.

    fungal hyphae have on corals, their mechanism of penetration and the role their enzymes play in this process. 3.2. Fungi as pathogens in reef ecosystems Besides natural disasters and climate warming, diseases have contributed to coral decline... defence mechanisms against predation, biofouling, diseases, environmental perturbations and other stressors. These chemicals are either synthesized by the organisms themselves or their endobiontic microorganisms. If these valuable compounds...

  16. Nitrogen Fixation Aligns with nifH Abundance and Expression in Two Coral Trophic Functional Groups

    KAUST Repository

    Pogoreutz, Claudia

    2017-06-28

    Microbial nitrogen fixation (diazotrophy) is a functional trait widely associated with tropical reef-building (scleractinian) corals. While the integral role of nitrogen fixation in coral nutrient dynamics is recognized, its ecological significance across different coral functional groups remains yet to be evaluated. Here we set out to compare molecular and physiological patterns of diazotrophy (i.e., nifH gene abundance and expression as well as nitrogen fixation rates) in two coral families with contrasting trophic strategies: highly heterotrophic, free-living members of the family Fungiidae (Pleuractis granulosa, Ctenactis echinata), and mostly autotrophic coral holobionts with low heterotrophic capacity (Pocilloporidae: Pocillopora verrucosa, Stylophora pistillata). The Fungiidae exhibited low diazotroph abundance (based on nifH gene copy numbers) and activity (based on nifH gene expression and the absence of detectable nitrogen fixation rates). In contrast, the mostly autotrophic Pocilloporidae exhibited nifH gene copy numbers and gene expression two orders of magnitude higher than in the Fungiidae, which coincided with detectable nitrogen fixation activity. Based on these data, we suggest that nitrogen fixation compensates for the low heterotrophic nitrogen uptake in autotrophic corals. Consequently, the ecological importance of diazotrophy in coral holobionts may be determined by the trophic functional group of the host.

  17. Coral recovery in the central Maldives archipelago since the last major mass-bleaching, in 1998

    Science.gov (United States)

    Pisapia, C.; Burn, D.; Yoosuf, R.; Najeeb, A.; Anderson, K. D.; Pratchett, M. S.

    2016-10-01

    Increasing frequency and severity of disturbances is causing global degradation of coral reef ecosystems. This study examined temporal changes in live coral cover and coral composition in the central Maldives from 1997 to 2016, encompassing two bleaching events, a tsunami, and an outbreak of Acanthaster planci. We also examined the contemporary size structure for five dominant coral taxa (tabular Acropora, Acropora muricata, Acropora humilis, Pocillopora spp, and massive Porites). Total coral cover increased throughout the study period, with marked increases following the 1998 mass-bleaching. The relative abundance of key genera has changed through time, where Acropora and Pocillopora (which are highly susceptible to bleaching) were under-represented following 1998 mass-bleaching but increased until outbreaks of A. planci in 2015. The contemporary size-structure for all coral taxa was dominated by larger colonies with peaked distributions suggesting that recent disturbances had a disproportionate impact on smaller colonies, or that recruitment is currently limited. This may suggest that coral resilience has been compromised by recent disturbances, and further bleaching (expected in 2016) could lead to highly protracted recovery times. We showed that Maldivian reefs recovered following the 1998 mass-bleaching event, but it took up to a decade, and ongoing disturbances may be eroding reef resilience.

  18. Nitrogen Fixation Aligns with nifH Abundance and Expression in Two Coral Trophic Functional Groups

    KAUST Repository

    Pogoreutz, Claudia; Radecker, Nils; Cardenas, Anny; Gä rdes, Astrid; Wild, Christian; Voolstra, Christian R.

    2017-01-01

    Microbial nitrogen fixation (diazotrophy) is a functional trait widely associated with tropical reef-building (scleractinian) corals. While the integral role of nitrogen fixation in coral nutrient dynamics is recognized, its ecological significance across different coral functional groups remains yet to be evaluated. Here we set out to compare molecular and physiological patterns of diazotrophy (i.e., nifH gene abundance and expression as well as nitrogen fixation rates) in two coral families with contrasting trophic strategies: highly heterotrophic, free-living members of the family Fungiidae (Pleuractis granulosa, Ctenactis echinata), and mostly autotrophic coral holobionts with low heterotrophic capacity (Pocilloporidae: Pocillopora verrucosa, Stylophora pistillata). The Fungiidae exhibited low diazotroph abundance (based on nifH gene copy numbers) and activity (based on nifH gene expression and the absence of detectable nitrogen fixation rates). In contrast, the mostly autotrophic Pocilloporidae exhibited nifH gene copy numbers and gene expression two orders of magnitude higher than in the Fungiidae, which coincided with detectable nitrogen fixation activity. Based on these data, we suggest that nitrogen fixation compensates for the low heterotrophic nitrogen uptake in autotrophic corals. Consequently, the ecological importance of diazotrophy in coral holobionts may be determined by the trophic functional group of the host.

  19. Multi-scale analysis of hermatypic coral assemblages at Mexican Central Pacific

    Directory of Open Access Journals (Sweden)

    Joicye Hernández-Zulueta

    2017-03-01

    Full Text Available The Mexican Central Pacific is located in a zone of oceanographic transition between two biogeographic provinces with particular conditions that affect the associated fauna. The objective of this study was to evaluate the variation of hermatypic coral assemblages in this region and to determine their relationship with the heterogeneity of the benthonic habitat and spatial variables. A total of 156 transects were carried out at 41 sites in the years 2010 and 2011. The sampling effort returned 96.7% of the coral richness expected for the area, with a total of 15 species recorded. The results showed that richness, diversity and cover of corals varied only at the site and state scales. However, the composition and coverage of all coral species, as well as the benthonic habitat structure, differed significantly across the study scales (i.e. sites, zones and states. Canonical redundancy analysis showed that variation in the richness, diversity and assemblages of corals was explained by the cover of live corals, articulated calcareous algae, sandy substrate, sponges and fleshy macroalgae. This study suggests that local scale (i.e. site variation in the coral assemblages of the Mexican Central Pacific is the result of the heterogeneity of the benthonic habitat, while geomorphological and oceanographic characteristics play a greater role at regional scale.

  20. Coral Reef Protection Implementation Plan

    National Research Council Canada - National Science Library

    Lobel, Lisa

    2000-01-01

    This document identify policies and actions to implement the Department of Defense's responsibilities under Executive Order 13089 on Coral Reef Protection, and are a requirement of the interim Task...

  1. Advancing Ocean Monitoring Near Coral Reefs

    Science.gov (United States)

    Heron, Scott F.; Steinberg, Craig R.; Heron, Mal L.; Mantovanelli, Alessandra; Jaffrés, Jasmine B. D.; Skirving, William J.; McAllister, Felicity; Rigby, Paul; Wisdom, Daniel; Bainbridge, Scott

    2010-10-01

    Corals, the foundation of tropical marine ecosystems, exist in a symbiotic relationship with zooxanthellae (algae). The corals obtain much of their energy by consuming compounds derived from photosynthesis by these microorganisms; the microorganisms, which reside in the coral tissue, in turn use waste products from the corals to sustain photosynthesis. This symbiosis is very sensitive to subtle changes in environment, such as increased ocean acidity, temperature, and light. When unduly stressed, the colorful algae are expelled from the corals, causing the corals to “bleach” and potentially die [e.g., van Oppen and Lough, 2009].

  2. Coral Sr-U Thermometry

    Science.gov (United States)

    DeCarlo, T. M.; Gaetani, G. A.; Cohen, A. L.; Foster, G. L.; Alpert, A.; Stewart, J.

    2016-12-01

    Coral skeletons archive the past two millennia of climate variability in the oceans with unrivaled temporal resolution. However, extracting accurate temperature information from coral skeletons is confounded by "vital effects", which often override the temperature dependence of geochemical proxies. Here, we present a new approach to coral paleothermometry based on results of abiogenic precipitation experiments interpreted within a framework provided by a quantitative model of the coral biomineralization process. We conducted laboratory experiments to test the temperature and carbonate chemistry controls on abiogenic partitioning of Sr/Ca and U/Ca between aragonite and seawater, and we modeled the sensitivity of skeletal composition to processes occurring at the site of calcification. The model predicts that temperature can be accurately reconstructed from coral skeleton by combining Sr/Ca and U/Ca ratios into a new proxy, Sr-U. We tested the model predictions with measured Sr/Ca and U/Ca ratios of fourteen Porites sp. corals collected from the tropical Pacific Ocean and the Red Sea, with a subset also analyzed using the boron isotope (δ11B) pH proxy. Observed relationships among Sr/Ca, U/Ca, and δ11B agree with model predictions, indicating that the model accounts for the key features of the coral biomineralization process. We calibrated Sr-U to instrumental temperature records and found that it captures 93% of mean annual variability (26-30 °C) and predicts temperature within 0.5 °C (1 σ). Conversely, Sr/Ca alone has an error of prediction of 1 °C and often diverges from observed temperature by 3 °C or more. Many of the problems afflicting Sr/Ca - including offsets among neighboring corals and decouplings from temperature during coral stress events - are reconciled by Sr-U. By accounting for the influence of the coral biomineralization process, the Sr-U thermometer may offer significantly improved reliability for reconstructing ocean temperatures from coral

  3. Radiocarbon Based Ages and Growth Rates: Hawaiian Deep Sea Corals

    Energy Technology Data Exchange (ETDEWEB)

    Roark, E B; Guilderson, T P; Dunbar, R B; Ingram, B L

    2006-01-13

    The radial growth rates and ages of three different groups of Hawaiian deep-sea 'corals' were determined using radiocarbon measurements. Specimens of Corallium secundum, Gerardia sp., and Leiopathes glaberrima, were collected from 450 {+-} 40 m at the Makapuu deep-sea coral bed using a submersible (PISCES V). Specimens of Antipathes dichotoma were collected at 50 m off Lahaina, Maui. The primary source of carbon to the calcitic C. secundum skeleton is in situ dissolved inorganic carbon (DIC). Using bomb {sup 14}C time markers we calculate radial growth rates of {approx} 170 {micro}m y{sup -1} and ages of 68-75 years on specimens as tall as 28 cm of C. secundum. Gerardia sp., A. dichotoma, and L. glaberrima have proteinaceous skeletons and labile particulate organic carbon (POC) is their primary source of architectural carbon. Using {sup 14}C we calculate a radial growth rate of 15 {micro}m y{sup -1} and an age of 807 {+-} 30 years for a live collected Gerardia sp., showing that these organisms are extremely long lived. Inner and outer {sup 14}C measurements on four sub-fossil Gerardia spp. samples produce similar growth rate estimates (range 14-45 {micro}m y{sup -1}) and ages (range 450-2742 years) as observed for the live collected sample. Similarly, with a growth rate of < 10 {micro}m y{sup -1} and an age of {approx}2377 years, L. glaberrima at the Makapuu coral bed, is also extremely long lived. In contrast, the shallow-collected A. dichotoma samples yield growth rates ranging from 130 to 1,140 {micro}m y{sup -1}. These results show that Hawaiian deep-sea corals grow more slowly and are older than previously thought.

  4. Temporal comparison and predictors of fish species abundance and richness on undisturbed coral reef patches

    Directory of Open Access Journals (Sweden)

    Elena L.E.S. Wagner

    2015-12-01

    Full Text Available Large disturbances can cause rapid degradation of coral reef communities, but what baseline changes in species assemblages occur on undisturbed reefs through time? We surveyed live coral cover, reef fish abundance and fish species richness in 1997 and again in 2007 on 47 fringing patch reefs of varying size and depth at Mersa Bareika, Ras Mohammed National Park, Egypt. No major human or natural disturbance event occurred between these two survey periods in this remote protected area. In the absence of large disturbances, we found that live coral cover, reef fish abundance and fish species richness did not differ in 1997 compared to 2007. Fish abundance and species richness on patches was largely related to the presence of shelters (caves and/or holes, live coral cover and patch size (volume. The presence of the ectoparasite-eating cleaner wrasse, Labroides dimidiatus, was also positively related to fish species richness. Our results underscore the importance of physical reef characteristics, such as patch size and shelter availability, in addition to biotic characteristics, such as live coral cover and cleaner wrasse abundance, in supporting reef fish species richness and abundance through time in a relatively undisturbed and understudied region.

  5. Macroalgal herbivory on recovering versus degrading coral reefs

    Science.gov (United States)

    Chong-Seng, K. M.; Nash, K. L.; Bellwood, D. R.; Graham, N. A. J.

    2014-06-01

    Macroalgal-feeding fishes are considered to be a key functional group on coral reefs due to their role in preventing phase shifts from coral to macroalgal dominance, and potentially reversing the shift should it occur. However, assessments of macroalgal herbivory using bioassay experiments are primarily from systems with relatively high coral cover. This raises the question of whether continued functionality can be ensured in degraded systems. It is clearly important to determine whether the species that remove macroalgae on coral-dominated reefs will still be present and performing significant algal removal on macroalgal-dominated reefs. We compared the identity and effectiveness of macroalgal-feeding fishes on reefs in two conditions post-disturbance—those regenerating with high live coral cover (20-46 %) and those degrading with high macroalgal cover (57-82 %). Using filmed Sargassum bioassays, we found significantly different Sargassum biomass loss between the two conditions; mean assay weight loss due to herbivory was 27.9 ± 4.9 % on coral-dominated reefs and 2.2 ± 1.1 % on reefs with high macroalgal cover. However, once standardised for the availability of macroalgae on the reefs, the rates of removal were similar between the two reef conditions (4.8 ± 4.1 g m-2 h-1 on coral-dominated and 5.3 ± 2.1 g m-2 h-1 on macroalgal-dominated reefs). Interestingly, the Sargassum-assay consumer assemblages differed between reef conditions; nominally grazing herbivores, Siganus puelloides and Chlorurus sordidus, and the browser , Siganus sutor, dominated feeding on high coral cover reefs, whereas browsing herbivores, Naso elegans, Naso unicornis, and Leptoscarus vaigiensis, prevailed on macroalgal-dominated reefs. It appeared that macroalgal density in the surrounding habitat had a strong influence on the species driving the process of macroalgal removal. This suggests that although the function of macroalgal removal may continue, the species responsible may change

  6. Community Change within a Caribbean Coral Reef Marine Protected Area following Two Decades of Local Management

    KAUST Repository

    Noble, Mae M.

    2013-01-14

    Structural change in both the habitat and reef-associated fish assemblages within spatially managed coral reefs can provide key insights into the benefits and limitations of Marine Protected Areas (MPAs). While MPA zoning effects on particular target species are well reported, we are yet to fully resolve the various affects of spatial management on the structure of coral reef communities over decadal time scales. Here, we document mixed affects of MPA zoning on fish density, biomass and species richness over the 21 years since establishment of the Saba Marine Park (SMP). Although we found significantly greater biomass and species richness of reef-associated fishes within shallow habitats (5 meters depth) closed to fishing, this did not hold for deeper (15 m) habitats, and there was a widespread decline (38% decrease) in live hard coral cover and a 68% loss of carnivorous reef fishes across all zones of the SMP from the 1990s to 2008. Given the importance of live coral for the maintenance and replenishment of reef fishes, and the likely role of chronic disturbance in driving coral decline across the region, we explore how local spatial management can help protect coral reef ecosystems within the context of large-scale environmental pressures and disturbances outside the purview of local MPA management. © 2013 Noble et al.

  7. Community change within a Caribbean coral reef Marine Protected Area following two decades of local management.

    Directory of Open Access Journals (Sweden)

    Mae M Noble

    Full Text Available Structural change in both the habitat and reef-associated fish assemblages within spatially managed coral reefs can provide key insights into the benefits and limitations of Marine Protected Areas (MPAs. While MPA zoning effects on particular target species are well reported, we are yet to fully resolve the various affects of spatial management on the structure of coral reef communities over decadal time scales. Here, we document mixed affects of MPA zoning on fish density, biomass and species richness over the 21 years since establishment of the Saba Marine Park (SMP. Although we found significantly greater biomass and species richness of reef-associated fishes within shallow habitats (5 meters depth closed to fishing, this did not hold for deeper (15 m habitats, and there was a widespread decline (38% decrease in live hard coral cover and a 68% loss of carnivorous reef fishes across all zones of the SMP from the 1990s to 2008. Given the importance of live coral for the maintenance and replenishment of reef fishes, and the likely role of chronic disturbance in driving coral decline across the region, we explore how local spatial management can help protect coral reef ecosystems within the context of large-scale environmental pressures and disturbances outside the purview of local MPA management.

  8. Socio-ecological dynamics of Caribbean coral reef ecosystems and conservation opinion propagation.

    Science.gov (United States)

    Thampi, Vivek A; Anand, Madhur; Bauch, Chris T

    2018-02-07

    The Caribbean coral reef ecosystem has experienced a long history of deterioration due to various stressors. For instance, over-fishing of parrotfish - an important grazer of macroalgae that can prevent destructive overgrowth of macroalgae - has threatened reef ecosystems in recent decades and stimulated conservation efforts such as the formation of marine protected areas. Here we develop a mathematical model of coupled socio-ecological interactions between reef dynamics and conservation opinion dynamics to better understand how natural and human factors interact individually and in combination to determine coral reef cover. We find that the coupling opinion and reef systems generates complex dynamics that are difficult to anticipate without use of a model. For instance, instead of converging to a stable state of constant coral cover and conservationist opinion, the system can oscillate between low and high live coral cover as human opinion oscillates in a boom-bust cycle between complacency and concern. Out of various possible parameter manipulations, we also find that raising awareness of coral reef endangerment best avoids counter-productive nonlinear feedbacks and always increases and stabilizes live coral reef cover. In conclusion, an improved understanding of coupled opinion-reef dynamics under anthrogenic stressors is possible using coupled socio-ecological models, and such models should be further researched.

  9. Viruses: agents of coral disease?

    Science.gov (United States)

    Davy, S K; Burchett, S G; Dale, A L; Davies, P; Davy, J E; Muncke, C; Hoegh-Guldberg, O; Wilson, W H

    2006-03-23

    The potential role of viruses in coral disease has only recently begun to receive attention. Here we describe our attempts to determine whether viruses are present in thermally stressed corals Pavona danai, Acropora formosa and Stylophora pistillata and zoanthids Zoanthus sp., and their zooxanthellae. Heat-shocked P. danai, A. formosa and Zoanthus sp. all produced numerous virus-like particles (VLPs) that were evident in the animal tissue, zooxanthellae and the surrounding seawater; VLPs were also seen around heat-shocked freshly isolated zooxanthellae (FIZ) from P. danai and S. pistillata. The most commonly seen VLPs were tail-less, hexagonal and about 40 to 50 nm in diameter, though a diverse range of other VLP morphotypes (e.g. rounded, rod-shaped, droplet-shaped, filamentous) were also present around corals. When VLPs around heat-shocked FIZ from S. pistillata were added to non-stressed FIZ from this coral, they resulted in cell lysis, suggesting that an infectious agent was present; however, analysis with transmission electron microscopy provided no clear evidence of viral infection. The release of diverse VLPs was again apparent when flow cytometry was used to enumerate release by heat-stressed A. formosa nubbins. Our data support the infection of reef corals by viruses, though we cannot yet determine the precise origin (i.e. coral, zooxanthellae and/or surface microbes) of the VLPs seen. Furthermore, genome sequence data are required to establish the presence of viruses unequivocally.

  10. Comparative genomics explains the evolutionary success of reef-forming corals

    KAUST Repository

    Bhattacharya, Debashish

    2016-05-24

    Transcriptome and genome data from twenty stony coral species and a selection of reference bilaterians were studied to elucidate coral evolutionary history. We identified genes that encode the proteins responsible for the precipitation and aggregation of the aragonite skeleton on which the organisms live, and revealed a network of environmental sensors that coordinate responses of the host animals to temperature, light, and pH. Furthermore, we describe a variety of stress-related pathways, including apoptotic pathways that allow the host animals to detoxify reactive oxygen and nitrogen species that are generated by their intracellular photosynthetic symbionts, and determine the fate of corals under environmental stress. Some of these genes arose through horizontal gene transfer and comprise at least 0.2% of the animal gene inventory. Our analysis elucidates the evolutionary strategies that have allowed symbiotic corals to adapt and thrive for hundreds of millions of years.

  11. 21st Century Rise in Anthropogenic Nitrogen Deposition on a Remote Coral Reef

    Science.gov (United States)

    Ren, H. A.; Chen, Y. C.; Wang, X. T.; Wong, G. T. F.; Cohen, A. L.; DeCarlo, T. M.; Weigand, M. A.; Mii, H. S.; Sigman, D. M.

    2017-12-01

    With the rapid rise in pollution-associated nitrogen inputs to the western Pacific, it has been suggested that even the open ocean has been impacted through atmospheric deposition. In a coral core from Dongsha Atoll, a coral reef ecosystem 340 km from the nearest continent, we observe a decline in the 15N/14N of coral skeleton-bound organic matter, signaling increased deposition of anthropogenic atmospheric N on the open ocean and its incorporation into plankton and in turn the corals living on the atoll. The decrease began just several years before 2000 CE, decades later than predicted by other work, and the amplitude of decline suggests that anthropogenic atmospheric N input is now 20±5% of the annual N input to the surface ocean in this region, less than two-thirds of that estimated by models and analyses of nutrient ratio changes.

  12. Comparative genomics explains the evolutionary success of reef-forming corals

    KAUST Repository

    Bhattacharya, Debashish; Agrawal, Shobhit; Aranda, Manuel; Baumgarten, Sebastian; Belcaid, Mahdi; Drake, Jeana L; Erwin, Douglas; Foret, Sylvian; Gates, Ruth D; Gruber, David F; Kamel, Bishoy; Lesser, Michael P; Levy, Oren; Liew, Yi Jin; MacManes, Matthew; Mass, Tali; Medina, Monica; Mehr, Shaadi; Meyer, Eli; Price, Dana C; Putnam, Hollie M; Qiu, Huan; Shinzato, Chuya; Shoguchi, Eiichi; Stokes, Alexander J; Tambutté , Sylvie; Tchernov, Dan; Voolstra, Christian R.; Wagner, Nicole; Walker, Charles W; Weber, Andreas PM; Weis, Virginia; Zelzion, Ehud; Zoccola, Didier; Falkowski, Paul G

    2016-01-01

    Transcriptome and genome data from twenty stony coral species and a selection of reference bilaterians were studied to elucidate coral evolutionary history. We identified genes that encode the proteins responsible for the precipitation and aggregation of the aragonite skeleton on which the organisms live, and revealed a network of environmental sensors that coordinate responses of the host animals to temperature, light, and pH. Furthermore, we describe a variety of stress-related pathways, including apoptotic pathways that allow the host animals to detoxify reactive oxygen and nitrogen species that are generated by their intracellular photosynthetic symbionts, and determine the fate of corals under environmental stress. Some of these genes arose through horizontal gene transfer and comprise at least 0.2% of the animal gene inventory. Our analysis elucidates the evolutionary strategies that have allowed symbiotic corals to adapt and thrive for hundreds of millions of years.

  13. THE CONDITION OF CORAL REEFS IN SOUTH FLORIDA (2000) USING CORAL DISEASE AND BLEACHING AS INDICATORS

    Science.gov (United States)

    The destruction for coral reef habitats is occurring at unprecedented levels. Coral disease epizootics in the Southwestern Atlantic have lead to coral replacement by turf algae, prompting a call to classify some coral species as endangered. In addition, a massive bleaching event ...

  14. Coral Reef Genomics: Developing tools for functional genomics ofcoral symbiosis

    Energy Technology Data Exchange (ETDEWEB)

    Schwarz, Jodi; Brokstein, Peter; Manohar, Chitra; Coffroth, MaryAlice; Szmant, Alina; Medina, Monica

    2005-03-01

    Symbioses between cnidarians and dinoflagellates in the genus Symbiodinium are widespread in the marine environment. The importance of this symbiosis to reef-building corals and reef nutrient and carbon cycles is well documented, but little is known about the mechanisms by which the partners establish and regulate the symbiosis. Because the dinoflagellate symbionts live inside the cells of their host coral, the interactions between the partners occur on cellular and molecular levels, as each partner alters the expression of genes and proteins to facilitate the partnership. These interactions can examined using high-throughput techniques that allow thousands of genes to be examined simultaneously. We are developing the groundwork so that we can use DNA microarray profiling to identify genes involved in the Montastraea faveolata and Acropora palmata symbioses. Here we report results from the initial steps in this microarray initiative, that is, the construction of cDNA libraries from 4 of 16 target stages, sequencing of 3450 cDNA clones to generate Expressed Sequenced Tags (ESTs), and annotation of the ESTs to identify candidate genes to include in the microarrays. An understanding of how the coral-dinoflagellate symbiosis is regulated will have implications for atmospheric and ocean sciences, conservation biology, the study and diagnosis of coral bleaching and disease, and comparative studies of animal-protest interactions.

  15. Implications of coral harvest and transplantation on reefs in northwestern Dominica

    Directory of Open Access Journals (Sweden)

    Andrew W Bruckner

    2010-10-01

    Full Text Available In June, 2002, the government of Dominica requested assistance in evaluating the coral culture and transplantation activities being undertaken by Oceanographic Institute of Dominica (OID, a coral farm culturing both western Atlantic and Indo-Pacific corals for restoration and commercial sales. We assessed the culture facilities of OID, the condition of reefs, potential impacts of coral collection and benefits of coral transplantation. Coral reefs (9 reefs, 3-20m depth were characterized by 35 species of scleractinian corals and a live coral cover of 8-35%. Early colonizing, brooders such as Porites astreoides (14.8% of all corals, P. porites (14.8%, Meandrina meandrites (14.7% and Agaricia agaricites (9.1% were the most abundant corals, but colonies were mostly small (mean=25cm diameter. Montastraea annularis (complex was the other dominant taxa (20.8% of all corals and colonies were larger (mean=70cm. Corals (pooled species were missing an average of 20% of their tissue, with a mean of 1.4% recent mortality. Coral diseases affected 6.4% of all colonies, with the highest prevalence at Cabrits West (11.0%, Douglas Bay (12.2% and Coconut Outer reef (20.7%. White plague and yellow band disease were causing the greatest loss of tissue, especially among M. annularis (complex, with localized impacts from corallivores, overgrowth by macroalgae, storm damage and sedimentation. While the reefs appeared to be undergoing substantial decline, restoration efforts by OID were unlikely to promote recovery. No Pacific species were identified at OID restoration sites, yet species chosen for transplantation with highest survival included short-lived brooders (Agaricia and Porites that were abundant in restoration sites, as well as non-reef builders (Palythoa and Erythropodium that monopolize substrates and overgrow corals. The species of highest value for restoration (massive broadcast spawners showed low survivorship and unrestored populations of these species

  16. U-Th dating reveals regional-scale decline of branching Acropora corals on the Great Barrier Reef over the past century

    Science.gov (United States)

    Clark, Tara R.; Roff, George; Zhao, Jian-xin; Feng, Yue-xing; Done, Terence J.; McCook, Laurence J.; Pandolfi, John M.

    2017-09-01

    Hard coral cover on the Great Barrier Reef (GBR) is on a trajectory of decline. However, little is known about past coral mortality before the advent of long-term monitoring (circa 1980s). Using paleoecological analysis and high-precision uranium-thorium (U-Th) dating, we reveal an extensive loss of branching Acropora corals and changes in coral community structure in the Palm Islands region of the central GBR over the past century. In 2008, dead coral assemblages were dominated by large, branching Acropora and living coral assemblages by genera typically found in turbid inshore environments. The timing of Acropora mortality was found to be occasionally synchronous among reefs and frequently linked to discrete disturbance events, occurring in the 1920s to 1960s and again in the 1980s to 1990s. Surveys conducted in 2014 revealed low Acropora cover (shifted baseline.

  17. A geological perspective on the degradation and conservation of western Atlantic coral reefs

    Science.gov (United States)

    Kuffner, Ilsa B.; Toth, Lauren T.

    2016-01-01

    Continuing coral-reef degradation in the western Atlantic is resulting in loss of ecological and geologic functions of reefs. With the goal of assisting resource managers and stewards of reefs in setting and measuring progress toward realistic goals for coral-reef conservation and restoration, we examined reef degradation in this region from a geological perspective. The importance of ecosystem services provided by coral reefs—as breakwaters that dissipate wave energy and protect shorelines and as providers of habitat for innumerable species—cannot be overstated. However, the few coral species responsible for reef building in the western Atlantic during the last approximately 1.5 million years are not thriving in the 21st century. These species are highly sensitive to abrupt temperature extremes, prone to disease infection, and have low sexual reproductive potential. Their vulnerability and the low functional redundancy of branching corals have led to the low resilience of western Atlantic reef ecosystems. The decrease in live coral cover over the last 50 years highlights the need for study of relict (senescent) reefs, which, from the perspective of coastline protection and habitat structure, may be just as important to conserve as the living coral veneer. Research is needed to characterize the geological processes of bioerosion, reef cementation, and sediment transport as they relate to modern-day changes in reef elevation. For example, although parrotfish remove nuisance macroalgae, possibly promoting coral recruitment, they will not save Atlantic reefs from geological degradation. In fact, these fish are quickly nibbling away significant quantities of Holocene reef framework. The question of how different biota covering dead reefs affect framework resistance to biological and physical erosion needs to be addressed. Monitoring and managing reefs with respect to physical resilience, in addition to ecological resilience, could optimize the expenditure of

  18. [Coral reefs in the face of ecological threats of XXI century].

    Science.gov (United States)

    Tkachenko, K S

    2015-01-01

    To date, more than a quarter of tropical coral reefs of the World Ocean are believed to be totally de- stroyed. Given the present rates of reefs degradation, this value may be doubled in the nearest 30 years. For the essential part of coastal community, the destruction of coral ecosystems implies the loss of the major food sources, natural protection from storms, and significant (if not the only) revenue from exploi- tation of reefs especially in tourism industry. Finally, the disappearance of low-laying coral islands may threat the local communities by deprivation of living space. Global negative effects include temperature anomalies of sea surface waters and an increase of atmospheric CO2 concentration leading to ocean acidification. Local negative effects are related to in- crease of sedimentation and eutrophication, cyclone and storm passes, coral diseases, chemical pollution, mechanical destruction of corals by humans, anthropogenic depletion of functional groups of fish and invertebrates. An entire set of responses of coral ecosystems to stressful factors on the levels of both separate taxa and ecosystem is discussed. An analysis of published data suggests that with high probability the tropical coral communities will come to collapse stage by the middle of the current century at more than 50% of the area of their biogeographic range, especially in the regions of dense human population. At the most optimistic scenario, complex effect of reviewed negative factors will result in coral ecosystems main- taining in some areas. However, after global transformations, these ecosystems will be dominated by the most resistant taxa, mainly massive and encrusting forms of long-lived species with low growth rates and high competitive ability. Among such taxa, Poritidae demonstrates the highest adaptive capability. At the most pessimistic scenario, scleractinian communities will be replaced by alternative communities of macroalgae and non-calcareous anthozoans.

  19. Introduction of geospatial perspective to the ecology of fish-habitat relationships in Indonesian coral reefs: A remote sensing approach

    Science.gov (United States)

    Sawayama, Shuhei; Nurdin, Nurjannah; Akbar AS, Muhammad; Sakamoto, Shingo X.; Komatsu, Teruhisa

    2015-06-01

    Coral reef ecosystems worldwide are now being harmed by various stresses accompanying the degradation of fish habitats and thus knowledge of fish-habitat relationships is urgently required. Because conventional research methods were not practical for this purpose due to the lack of a geospatial perspective, we attempted to develop a research method integrating visual fish observation with a seabed habitat map and to expand knowledge to a two-dimensional scale. WorldView-2 satellite imagery of Spermonde Archipelago, Indonesia obtained in September 2012 was analyzed and classified into four typical substrates: live coral, dead coral, seagrass and sand. Overall classification accuracy of this map was 81.3% and considered precise enough for subsequent analyses. Three sub-areas (CC: continuous coral reef, BC: boundary of coral reef and FC: few live coral zone) around reef slopes were extracted from the map. Visual transect surveys for several fish species were conducted within each sub-area in June 2013. As a result, Mean density (Ind. / 300 m2) of Chaetodon octofasciatus, known as an obligate feeder of corals, was significantly higher at BC than at the others (p < 0.05), implying that this species' density is strongly influenced by spatial configuration of its habitat, like the "edge effect." This indicates that future conservation procedures for coral reef fishes should consider not only coral cover but also its spatial configuration. The present study also indicates that the introduction of a geospatial perspective derived from remote sensing has great potential to progress conventional ecological studies on coral reef fishes.

  20. Status of coral reefs of India

    Digital Repository Service at National Institute of Oceanography (India)

    Muley, E.V.; Venkataraman, K.; Alfred, J.R.B.; Wafar, M.V.M.

    and economic significance of coral reefs and the threat perceptions, Government of India has initiated measures for their intensive conservation and management. Present paper deals with ecological status of coral reefs in the country and various national...

  1. Deep-Sea Soft Coral Habitat Suitability

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Deep-sea corals, also known as cold water corals, create complex communities that provide habitat for a variety of invertebrate and fish species, such as grouper,...

  2. Deep-Sea Stony Coral Habitat Suitability

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Deep-sea corals, also known as cold water corals, create complex communities that provide habitat for a variety of invertebrate and fish species, such as grouper,...

  3. Coral Reef Watch, Hotspots, 50 km

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NOAA Coral Reef Watch provides Coral Bleaching hotspot maps derived from NOAA's Polar Operational Environmental Satellites (POES). This data provides global area...

  4. Heterotrophic compensation: a possible mechanism for resilience of coral reefs to global warming or a sign of prolonged stress?

    Directory of Open Access Journals (Sweden)

    Adam D Hughes

    Full Text Available Thermally induced bleaching has caused a global decline in corals and the frequency of such bleaching events will increase. Thermal bleaching severely disrupts the trophic behaviour of the coral holobiont, reducing the photosynthetically derived energy available to the coral host. In the short term this reduction in energy transfer from endosymbiotic algae results in an energy deficit for the coral host. If the bleaching event is short-lived then the coral may survive this energy deficit by depleting its lipid reserves, or by increasing heterotrophic energy acquisition. We show for the first time that the coral animal is capable of increasing the amount of heterotrophic carbon incorporated into its tissues for almost a year following bleaching. This prolonged heterotrophic compensation could be a sign of resilience or prolonged stress. If the heterotrophic compensation is in fact an acclimatization response, then this physiological response could act as a buffer from future bleaching by providing sufficient heterotrophic energy to compensate for photoautotrophic energy losses during bleaching, and potentially minimizing the effect of subsequent elevated temperature stresses. However, if the elevated incorporation of zooplankton is a sign that the effects of bleaching continue to be stressful on the holobiont, even after 11 months of recovery, then this physiological response would indicate that complete coral recovery requires more than 11 months to achieve. If coral bleaching becomes an annual global phenomenon by mid-century, then present temporal refugia will not be sufficient to allow coral colonies to recover between bleaching events and coral reefs will become increasingly less resilient to future climate change. If, however, increasing their sequestration of zooplankton-derived nutrition into their tissues over prolonged periods of time is a compensating mechanism, the impacts of annual bleaching may be reduced. Thus, some coral species

  5. Coral Reefs at the Northernmost Tip of Borneo: An Assessment of Scleractinian Species Richness Patterns and Benthic Reef Assemblages.

    Science.gov (United States)

    Waheed, Zarinah; van Mil, Harald G J; Syed Hussein, Muhammad Ali; Jumin, Robecca; Golam Ahad, Bobita; Hoeksema, Bert W

    2015-01-01

    The coral reefs at the northernmost tip of Sabah, Borneo will be established under a marine protected area: the Tun Mustapha Park (TMP) by the end of 2015. This area is a passage where the Sulu Sea meets the South China Sea and it is situated at the border of the area of maximum marine biodiversity, the Coral Triangle. The TMP includes fringing and patch reefs established on a relatively shallow sea floor. Surveys were carried out to examine features of the coral reefs in terms of scleractinian species richness, and benthic reef assemblages following the Reef Check substrate categories, with emphasis on hard coral cover. Variation in scleractinian diversity was based on the species composition of coral families Fungiidae (n = 39), Agariciidae (n = 30) and Euphylliidae (n = 15). The number of coral species was highest at reefs with a larger depth gradient i.e. at the periphery of the study area and in the deep South Banggi Channel. Average live hard coral cover across the sites was 49%. Only 7% of the examined reefs had > 75% hard coral cover, while the majority of the reef sites were rated fair (51%) and good (38%). Sites with low coral cover and high rubble fragments are evidence of blast fishing, although the observed damage appeared old. Depth was a dominant factor in influencing the coral species composition and benthic reef communities in the TMP. Besides filling in the information gaps regarding species richness and benthic cover for reef areas that were previously without any data, the results of this study together with information that is already available on the coral reefs of TMP will be used to make informed decisions on zoning plans for conservation priorities in the proposed park.

  6. Coral Reefs at the Northernmost Tip of Borneo: An Assessment of Scleractinian Species Richness Patterns and Benthic Reef Assemblages.

    Directory of Open Access Journals (Sweden)

    Zarinah Waheed

    Full Text Available The coral reefs at the northernmost tip of Sabah, Borneo will be established under a marine protected area: the Tun Mustapha Park (TMP by the end of 2015. This area is a passage where the Sulu Sea meets the South China Sea and it is situated at the border of the area of maximum marine biodiversity, the Coral Triangle. The TMP includes fringing and patch reefs established on a relatively shallow sea floor. Surveys were carried out to examine features of the coral reefs in terms of scleractinian species richness, and benthic reef assemblages following the Reef Check substrate categories, with emphasis on hard coral cover. Variation in scleractinian diversity was based on the species composition of coral families Fungiidae (n = 39, Agariciidae (n = 30 and Euphylliidae (n = 15. The number of coral species was highest at reefs with a larger depth gradient i.e. at the periphery of the study area and in the deep South Banggi Channel. Average live hard coral cover across the sites was 49%. Only 7% of the examined reefs had > 75% hard coral cover, while the majority of the reef sites were rated fair (51% and good (38%. Sites with low coral cover and high rubble fragments are evidence of blast fishing, although the observed damage appeared old. Depth was a dominant factor in influencing the coral species composition and benthic reef communities in the TMP. Besides filling in the information gaps regarding species richness and benthic cover for reef areas that were previously without any data, the results of this study together with information that is already available on the coral reefs of TMP will be used to make informed decisions on zoning plans for conservation priorities in the proposed park.

  7. Coral Reefs at the Northernmost Tip of Borneo: An Assessment of Scleractinian Species Richness Patterns and Benthic Reef Assemblages

    Science.gov (United States)

    Waheed, Zarinah; van Mil, Harald G. J.; Syed Hussein, Muhammad Ali; Jumin, Robecca; Golam Ahad, Bobita; Hoeksema, Bert W.

    2015-01-01

    The coral reefs at the northernmost tip of Sabah, Borneo will be established under a marine protected area: the Tun Mustapha Park (TMP) by the end of 2015. This area is a passage where the Sulu Sea meets the South China Sea and it is situated at the border of the area of maximum marine biodiversity, the Coral Triangle. The TMP includes fringing and patch reefs established on a relatively shallow sea floor. Surveys were carried out to examine features of the coral reefs in terms of scleractinian species richness, and benthic reef assemblages following the Reef Check substrate categories, with emphasis on hard coral cover. Variation in scleractinian diversity was based on the species composition of coral families Fungiidae (n = 39), Agariciidae (n = 30) and Euphylliidae (n = 15). The number of coral species was highest at reefs with a larger depth gradient i.e. at the periphery of the study area and in the deep South Banggi Channel. Average live hard coral cover across the sites was 49%. Only 7% of the examined reefs had > 75% hard coral cover, while the majority of the reef sites were rated fair (51%) and good (38%). Sites with low coral cover and high rubble fragments are evidence of blast fishing, although the observed damage appeared old. Depth was a dominant factor in influencing the coral species composition and benthic reef communities in the TMP. Besides filling in the information gaps regarding species richness and benthic cover for reef areas that were previously without any data, the results of this study together with information that is already available on the coral reefs of TMP will be used to make informed decisions on zoning plans for conservation priorities in the proposed park. PMID:26719987

  8. Coral diseases and bleaching on Colombian Caribbean coral reefs

    Directory of Open Access Journals (Sweden)

    Raúl Navas-Camacho

    2010-05-01

    Full Text Available Since 1998 the National Monitoring System for the Coral Reefs of Colombia (SIMAC has monitored the occurrence of coral bleaching and diseases in some Colombian coral reefs (permanent stations at San Andres Island, Rosario Islands, Tayrona, San Bernardo Islands and Urabá. The main purpose is to evaluate their health status and to understand the factors that have been contributing to their decline. To estimate these occurrences, annual surveys in 126 permanent belt transects (10x2m with different depth intervals (3-6 meters, 9-12 meters and 15-18 meters are performed at all reef sites. Data from the 1998-2004 period, revealed that San Andrés Island had many colonies with diseases (38.9 colonies/m2, and Urabá had high numbers with bleaching (54.4 colonies/m2. Of the seven reported coral diseases studied, Dark Spots Disease (DSD, and White Plague Disease (WPD were noteworthy because they occurred in all Caribbean monitored sites, and because of their high interannual infection incidence. Thirty five species of scleractinian corals were affected by at least one disease and a high incidence of coral diseases on the main reef builders is documented. Bleaching was present in 34 species. During the whole monitoring period, Agaricia agaricites and Siderastrea siderea were the species most severely affected by DSD and bleaching, respectively. Diseases on species such as Agaricia fragilis, A.grahamae, A. humilis, Diploria clivosa, Eusmilia fastigiata, Millepora complanata, and Mycetophyllia aliciae are recorded for first time in Colombia. We present bleaching and disease incidences, kinds of diseases, coral species affected, reef localities studied, depth intervals of surveys, and temporal (years variation for each geographic area. This variation makes difficult to clearly determine defined patterns or general trends for monitored reefs. This is the first long-term study of coral diseases and bleaching in the Southwestern Caribbean, and one of the few

  9. Pre- and Post-operative cortical function of the kidney with staghorn calculi assessed by sup(99m)Tc-DMSA renal scintigraphy

    International Nuclear Information System (INIS)

    Kawamura, Juichi

    1982-01-01

    sup(99m)Tc-DMSA renal scintigraphy consisting of the cortical image and DMSA renal uptake was used to assess the pre- and post-operative renal function in 39 patients with staghorn calculi or complicated calculi occupying more than 2 major calices. Extended pyelolithotomy was performed on 14 patients, nephrolithotomy on 14 patients, pyelolithotomy combined with nephrotomy on 7 patients, and partial nephrectomy on 4 patients. Nine out of 14 patients who underwent pyelolithotomy and 4 out of 14 patients who underwent nephrolithotomy showed an increase or no change in the postoperative DMSA renal uptake in the diseased kidney. However, there was no increase in the postoperative DMSA renal uptake in the patients who underwent pyelolithotomy combined with nephrotomy or partial nephrectomy. Eight percent of the preoperative DMSA renal uptake in the diseased kidney seems to be the absolute level for predicting a postoperative recovery of the kidney function. The contralateral kidney function can affect the postoperative recovery of the function in the operative side. It seems to be hard to expect an increment in the DMSA renal uptake postoperatively when the ratio of DMSA renal uptake in the operative side to the total DMSA renal uptake is less than 20%. At least 6 months of the follow-up period is necessary for the evaluation of the kidney function in the operative side. DMSA renal scintigraphy is a useful modality to assess pre- and post-operative kidney function in nephrolithiasis from the point of both morphological and functional changes in the renal cortex. (author)

  10. 40 CFR 230.44 - Coral reefs.

    Science.gov (United States)

    2010-07-01

    ... 40 Protection of Environment 24 2010-07-01 2010-07-01 false Coral reefs. 230.44 Section 230.44... Aquatic Sites § 230.44 Coral reefs. (a) Coral reefs consist of the skeletal deposit, usually of calcareous... organisms present in growing portions of the reef. (b) Possible loss of values: The discharge of dredged or...

  11. Fidelity of the Sr/Ca proxy in recording ocean temperature in the western Atlantic coral Siderastrea siderea

    Science.gov (United States)

    Kuffner, Ilsa B.; Roberts, Kelsey E.; Flannery, Jennifer A.; Morrison, Jennifer M.; Richey, Julie N.

    2017-01-01

    Massive corals provide a useful archive of environmental variability, but careful testing of geochemical proxies in corals is necessary to validate the relationship between each proxy and environmental parameter throughout the full range of conditions experienced by the recording organisms. Here we use samples from a coral-growth study to test the hypothesis that Sr/Ca in the coral Siderastrea siderea accurately records sea-surface temperature (SST) in the subtropics (Florida, USA) along 350 km of reef tract. We test calcification rate, measured via buoyant weight, and linear extension (LE) rate, estimated with Alizarin Red-S staining, as predictors of variance in the Sr/Ca records of 39 individual S. siderea corals grown at four outer-reef locations next to in-situ temperature loggers during two, year-long periods. We found that corals with calcification rates corals that passed this quality control step, the Sr/Ca-SST proxy performed well in estimating mean annual temperature across three sites spanning 350 km of the Florida reef tract. However, there was some evidence that extreme temperature stress in 2010 (cold snap) and 2011 (SST above coral-bleaching threshold) may have caused the corals not to record the temperature extremes. Known stress events could be avoided during modern calibrations of paleoproxies.Plain Language SummaryCoral skeletons are used to decipher past environmental conditions in the ocean because they live for centuries and produce annual growth bands much like tree rings. Along with measuring coral growth rates in the past, coral skeletons can be chemically sampled to get even more detailed information, like past seawater temperatures. In this study we tested the validity of the strontium-to-calcium (Sr/Ca) temperature proxy in the Massive Starlet Coral (Siderastrea siderea) by sampling 39 corals that were grown in the ocean right next to instruments recording underwater temperature. We found that, as long as corals with very slow growth

  12. CORAL REEFS. Genomic determinants of coral heat tolerance across latitudes.

    Science.gov (United States)

    Dixon, Groves B; Davies, Sarah W; Aglyamova, Galina A; Meyer, Eli; Bay, Line K; Matz, Mikhail V

    2015-06-26

    As global warming continues, reef-building corals could avoid local population declines through "genetic rescue" involving exchange of heat-tolerant genotypes across latitudes, but only if latitudinal variation in thermal tolerance is heritable. Here, we show an up-to-10-fold increase in odds of survival of coral larvae under heat stress when their parents come from a warmer lower-latitude location. Elevated thermal tolerance was associated with heritable differences in expression of oxidative, extracellular, transport, and mitochondrial functions that indicated a lack of prior stress. Moreover, two genomic regions strongly responded to selection for thermal tolerance in interlatitudinal crosses. These results demonstrate that variation in coral thermal tolerance across latitudes has a strong genetic basis and could serve as raw material for natural selection. Copyright © 2015, American Association for the Advancement of Science.

  13. Global microbialization of coral reefs.

    Science.gov (United States)

    Haas, Andreas F; Fairoz, Mohamed F M; Kelly, Linda W; Nelson, Craig E; Dinsdale, Elizabeth A; Edwards, Robert A; Giles, Steve; Hatay, Mark; Hisakawa, Nao; Knowles, Ben; Lim, Yan Wei; Maughan, Heather; Pantos, Olga; Roach, Ty N F; Sanchez, Savannah E; Silveira, Cynthia B; Sandin, Stuart; Smith, Jennifer E; Rohwer, Forest

    2016-04-25

    Microbialization refers to the observed shift in ecosystem trophic structure towards higher microbial biomass and energy use. On coral reefs, the proximal causes of microbialization are overfishing and eutrophication, both of which facilitate enhanced growth of fleshy algae, conferring a competitive advantage over calcifying corals and coralline algae. The proposed mechanism for this competitive advantage is the DDAM positive feedback loop (dissolved organic carbon (DOC), disease, algae, microorganism), where DOC released by ungrazed fleshy algae supports copiotrophic, potentially pathogenic bacterial communities, ultimately harming corals and maintaining algal competitive dominance. Using an unprecedented data set of >400 samples from 60 coral reef sites, we show that the central DDAM predictions are consistent across three ocean basins. Reef algal cover is positively correlated with lower concentrations of DOC and higher microbial abundances. On turf and fleshy macroalgal-rich reefs, higher relative abundances of copiotrophic microbial taxa were identified. These microbial communities shift their metabolic potential for carbohydrate degradation from the more energy efficient Embden-Meyerhof-Parnas pathway on coral-dominated reefs to the less efficient Entner-Doudoroff and pentose phosphate pathways on algal-dominated reefs. This 'yield-to-power' switch by microorganism directly threatens reefs via increased hypoxia and greater CO2 release from the microbial respiration of DOC.

  14. Black reefs: iron-induced phase shifts on coral reefs.

    Science.gov (United States)

    Kelly, Linda Wegley; Barott, Katie L; Dinsdale, Elizabeth; Friedlander, Alan M; Nosrat, Bahador; Obura, David; Sala, Enric; Sandin, Stuart A; Smith, Jennifer E; Vermeij, Mark J A; Williams, Gareth J; Willner, Dana; Rohwer, Forest

    2012-03-01

    The Line Islands are calcium carbonate coral reef platforms located in iron-poor regions of the central Pacific. Natural terrestrial run-off of iron is non-existent and aerial deposition is extremely low. However, a number of ship groundings have occurred on these atolls. The reefs surrounding the shipwreck debris are characterized by high benthic cover of turf algae, macroalgae, cyanobacterial mats and corallimorphs, as well as particulate-laden, cloudy water. These sites also have very low coral and crustose coralline algal cover and are call black reefs because of the dark-colored benthic community and reduced clarity of the overlying water column. Here we use a combination of benthic surveys, chemistry, metagenomics and microcosms to investigate if and how shipwrecks initiate and maintain black reefs. Comparative surveys show that the live coral cover was reduced from 40 to 60% to reefs on Millennium, Tabuaeran and Kingman. These three sites are relatively large (>0.75 km(2)). The phase shift occurs rapidly; the Kingman black reef formed within 3 years of the ship grounding. Iron concentrations in algae tissue from the Millennium black reef site were six times higher than in algae collected from reference sites. Metagenomic sequencing of the Millennium Atoll black reef-associated microbial community was enriched in iron-associated virulence genes and known pathogens. Microcosm experiments showed that corals were killed by black reef rubble through microbial activity. Together these results demonstrate that shipwrecks and their associated iron pose significant threats to coral reefs in iron-limited regions.

  15. Acoustic and biological trends on coral reefs off Maui, Hawaii

    Science.gov (United States)

    Kaplan, Maxwell B.; Lammers, Marc O.; Zang, Eden; Aran Mooney, T.

    2018-03-01

    Coral reefs are characterized by high biodiversity, and evidence suggests that reef soundscapes reflect local species assemblages. To investigate how sounds produced on a given reef relate to abiotic and biotic parameters and how that relationship may change over time, an observational study was conducted between September 2014 and January 2016 at seven Hawaiian reefs that varied in coral cover, rugosity, and fish assemblages. The reefs were equipped with temperature loggers and acoustic recording devices that recorded on a 10% duty cycle. Benthic and fish visual survey data were collected four times over the course of the study. On average, reefs ranged from 0 to 80% live coral cover, although changes between surveys were noted, in particular during the major El Niño-related bleaching event of October 2015. Acoustic analyses focused on two frequency bands (50-1200 and 1.8-20.5 kHz) that corresponded to the dominant spectral features of the major sound-producing taxa on these reefs, fish, and snapping shrimp, respectively. In the low-frequency band, the presence of humpback whales (December-May) was a major contributor to sound level, whereas in the high-frequency band sound level closely tracked water temperature. On shorter timescales, the magnitude of the diel trend in sound production was greater than that of the lunar trend, but both varied in strength among reefs, which may reflect differences in the species assemblages present. Results indicated that the magnitude of the diel trend was related to fish densities at low frequencies and coral cover at high frequencies; however, the strength of these relationships varied by season. Thus, long-term acoustic recordings capture the substantial acoustic variability present in coral-reef ecosystems and provide insight into the presence and relative abundance of sound-producing organisms.

  16. Coastal hazards and groundwater salinization on low coral islands.

    Science.gov (United States)

    Terry, James P.; Chui, T. F. May

    2016-04-01

    Remote oceanic communities living on low-lying coral islands (atolls) without surface water rely for their survival on the continuing viability of fragile groundwater resources. These exist in the form of fresh groundwater lenses (FGLs) that develop naturally within the porous coral sand and gravel substrate. Coastal hazards such as inundation by high-energy waves driven by storms and continuing sea-level rise (SLR) are among many possible threats to viable FGL size and quality on atolls. Yet, not much is known about the combined effects of wave washover during powerful storms and SLR on different sizes of coral island, nor conversely how island size influences lens resilience against damage. This study investigates FGL damage by salinization (and resilience) caused by such coastal hazards using a modelling approach. Numerical modelling is carried out to generate steady-state FGL configurations at three chosen island sizes (400, 600 and 800 m widths). Steady-state solutions reveal how FGL dimensions are related in a non-linear manner to coral island size, such that smaller islands develop much more restricted lenses than larger islands. A 40 cm SLR scenario is then imposed. This is followed by transient simulations to examine storm-induced wave washover and subsequent FGL responses to saline damage over a 1 year period. Smaller FGLs display greater potential for disturbance by SLR, while larger and more robust FGLs tend to show more resilience. Further results produce a somewhat counterintuitive finding: in the post-SLR condition, FGL vulnerability to washover salinization may actually be reduced, owing to the thinner layer of unsaturated substrate lying above the water table into which saline water can infiltrate during a storm event. Nonetheless, combined washover and SLR impacts imply overall that advancing groundwater salinization may lead to some coral islands becoming uninhabitable long before they are completely submerged by sea-level rise, thereby calling

  17. A relic coral fauna threatened by global changes and human activities, Eastern Brazil.

    Science.gov (United States)

    Leão, Zelinda M A N; Kikuchi, Ruy K P

    2005-01-01

    Coral species composition of drilled cores from emergent bank reefs, and coral cover of the surface of old and living reefs located along the coast of the state of Bahia, Eastern Brazil, revealed that there is a marked change in the occurrence of the major building coral species in different time intervals of the reef structure, as well as in the living surface of reefs located in two different geographical sites. Holocene core sections from two reef areas (12 degrees 40'S-38 degrees 00'W and 18 degrees 00'S-39 degrees 00'W) have as major reef builders, on its topmost core interval (3 to 4 ky old), the endemic coral Mussismilia braziliensis Verrill, 1868, which also dominate on the 2.5-3.5 ky old surfaces of truncated reef tops. At the base of the cores (the 2m lower interval, older than 4 ky BP), another endemic coral Mussismilia harttii Verrill, 1868 is the dominant reef component. The relative abundance of M. braziliensis on the living surfaces of shallow reefs from both areas, shows that in the southern area, it is up to 98% on reefs located 60 km off the coast, in depths between 3 and 4m, but do not exceed 1.3% on the surface of the northern reefs located 1-2 km off the coast in depths 4-5m. The Holocene falling sea level that occurred along the coast of Brazil since 5.1 ky BP, causes an increasing runoff into the area of coastal reefs. This phenomenon may have affected the nearshore reef building fauna, replacing a more susceptive coral fauna with one better adapted to low light levels and higher sediment influx. The high turbidity associated with early Holocene shelf flooding, should also be responsible for the absence of M. braziliensis during the initial stages of reef buildup in Brazil. At the present time, the rapidly increasing human pressure, due to changes in land uses of the coastal zone (increasing sedimentation rate, nutrification of coastal waters, industrial pollution) and underwater practices, such as overfishing and an intense tourism, is

  18. Radiotracer studies on radionuclide and trace element cycling in corals

    International Nuclear Information System (INIS)

    Fowler, S.W.; Teyssie, J.L.; Acosta, A.; Gattuso, J.P.; Jaubert, J.

    1999-01-01

    Microcosm experiments were designed in which microcolonies of three coral species were exposed to gamma-emitting radiotracers of trace metals and radionuclides ( 110 Am, 109 Cd. 57 Cocyanocobalamin, 110 Ag, 134 Cs, 65 Zn, 60 Co, 75 Se, 85 Sr, 133 Ba, 54 Mn) to determine uptake and loss as well as distribution in tissue, skeleton and zooxanthellae. Following a seven day exposure in seawater, the degree of uptake (CF = concentration factor) for a given element was highly dependent on species. The highest CF s , in whole colonies were found for 100m Ag(82-172), 57 Co (68-124) and 65 Zn (41-52); the lowest CF s , were noted for the soluble radionuclides Cs (1-2) and Sr (2-9). Low CF s , were recorded in skeleton and increased by roughly an order of magnitude between skeleton, tissue and zooxanthellae. 241 Am is readily taken up by dead skeleton (CF=31-49), whereas in living corals it is preferentially accumulated by the tissue (CF=51-120) which acts as a partial barrier against contamination of the internal skeleton (CF=6-10). The chemical species of the element can also affect uptake by corals, as evidenced by the order of magnitude greater bioaccumulation of organic cobalt compared to the inorganic form in tissues. Once accumulated, some of the elements tested (e.g. Cd, Co) are strongly retained with biological half-lives as long as several months

  19. Petroleum hydrocarbon toxicity to corals: A review.

    Science.gov (United States)

    Turner, Nicholas R; Renegar, D Abigail

    2017-06-30

    The proximity of coral reefs to coastal urban areas and shipping lanes predisposes corals to petroleum pollution from multiple sources. Previous research has evaluated petroleum toxicity to coral using a variety of methodology, including monitoring effects of acute and chronic spills, in situ exposures, and ex situ exposures with both adult and larval stage corals. Variability in toxicant, bioassay conditions, species and other methodological disparities between studies prevents comprehensive conclusions regarding the toxicity of hydrocarbons to corals. Following standardized protocols and quantifying the concentration and composition of toxicant will aid in comparison of results between studies and extrapolation to actual spills. Copyright © 2017 Elsevier Ltd. All rights reserved.

  20. Assessment of host-associated genetic differentiation among phenotypically divergent populations of a coral-eating gastropod across the Caribbean.

    Directory of Open Access Journals (Sweden)

    Lyza Johnston

    Full Text Available Host-associated adaptation is emerging as a potential driver of population differentiation and speciation for marine organisms with major implications for ecosystem structure and function. Coralliophila abbreviata are corallivorous gastropods that live and feed on most of the reef-building corals in the tropical western Atlantic and Caribbean. Populations of C. abbreviata associated with the threatened acroporid corals, Acropora palmata and A. cervicornis, display different behavioral, morphological, demographic, and life-history characteristics than those that inhabit other coral host taxa, indicating that host-specific selective forces may be acting on C. abbreviata. Here, we used newly developed polymorphic microsatellite loci and mitochondrial cytochrome b sequence data to assess the population genetic structure, connectivity, and demographic history of C. abbreviata populations from three coral host taxa (A. palmata, Montastraea spp., Mycetophyllia spp. and six geographic locations across the Caribbean. Analysis of molecular variance provided some evidence of weak and possibly geographically variable host-associated differentiation but no evidence of differentiation among sampling locations or major oceanographic regions, suggesting high gene flow across the Caribbean. Phylogenetic network and bayesian clustering analyses supported a hypothesis of a single panmictic population as individuals failed to cluster by host or sampling location. Demographic analyses consistently supported a scenario of population expansion during the Pleistocene, a time of major carbonate reef development in the region. Although further study is needed to fully elucidate the interactive effects of host-associated selection and high gene flow in this system, our results have implications for local and regional community interactions and impact of predation on declining coral populations.

  1. Assessment of host-associated genetic differentiation among phenotypically divergent populations of a coral-eating gastropod across the Caribbean.

    Science.gov (United States)

    Johnston, Lyza; Miller, Margaret W; Baums, Iliana B

    2012-01-01

    Host-associated adaptation is emerging as a potential driver of population differentiation and speciation for marine organisms with major implications for ecosystem structure and function. Coralliophila abbreviata are corallivorous gastropods that live and feed on most of the reef-building corals in the tropical western Atlantic and Caribbean. Populations of C. abbreviata associated with the threatened acroporid corals, Acropora palmata and A. cervicornis, display different behavioral, morphological, demographic, and life-history characteristics than those that inhabit other coral host taxa, indicating that host-specific selective forces may be acting on C. abbreviata. Here, we used newly developed polymorphic microsatellite loci and mitochondrial cytochrome b sequence data to assess the population genetic structure, connectivity, and demographic history of C. abbreviata populations from three coral host taxa (A. palmata, Montastraea spp., Mycetophyllia spp.) and six geographic locations across the Caribbean. Analysis of molecular variance provided some evidence of weak and possibly geographically variable host-associated differentiation but no evidence of differentiation among sampling locations or major oceanographic regions, suggesting high gene flow across the Caribbean. Phylogenetic network and bayesian clustering analyses supported a hypothesis of a single panmictic population as individuals failed to cluster by host or sampling location. Demographic analyses consistently supported a scenario of population expansion during the Pleistocene, a time of major carbonate reef development in the region. Although further study is needed to fully elucidate the interactive effects of host-associated selection and high gene flow in this system, our results have implications for local and regional community interactions and impact of predation on declining coral populations.

  2. Oceanic forcing of coral reefs.

    Science.gov (United States)

    Lowe, Ryan J; Falter, James L

    2015-01-01

    Although the oceans play a fundamental role in shaping the distribution and function of coral reefs worldwide, a modern understanding of the complex interactions between ocean and reef processes is still only emerging. These dynamics are especially challenging owing to both the broad range of spatial scales (less than a meter to hundreds of kilometers) and the complex physical and biological feedbacks involved. Here, we review recent advances in our understanding of these processes, ranging from the small-scale mechanics of flow around coral communities and their influence on nutrient exchange to larger, reef-scale patterns of wave- and tide-driven circulation and their effects on reef water quality and perceived rates of metabolism. We also examine regional-scale drivers of reefs such as coastal upwelling, internal waves, and extreme disturbances such as cyclones. Our goal is to show how a wide range of ocean-driven processes ultimately shape the growth and metabolism of coral reefs.

  3. CORAL Server and CORAL Server Proxy: Scalable Access to Relational Databases from CORAL Applications

    CERN Document Server

    Valassi, A; Kalkhof, A; Salnikov, A; Wache, M

    2011-01-01

    The CORAL software is widely used at CERN for accessing the data stored by the LHC experiments using relational database technologies. CORAL provides a C++ abstraction layer that supports data persistency for several backends and deployment models, including local access to SQLite files, direct client access to Oracle and MySQL servers, and read-only access to Oracle through the FroNTier web server and cache. Two new components have recently been added to CORAL to implement a model involving a middle tier "CORAL server" deployed close to the database and a tree of "CORAL server proxy" instances, with data caching and multiplexing functionalities, deployed close to the client. The new components are meant to provide advantages for read-only and read-write data access, in both offline and online use cases, in the areas of scalability and performance (multiplexing for several incoming connections, optional data caching) and security (authentication via proxy certificates). A first implementation of the two new c...

  4. The Paradoxical Roles of Climate Stressors on Disturbance and Recovery of Coral Reef Ecosystems

    Science.gov (United States)

    Manfrino, C.; Foster, G.; Camp, E.

    2013-05-01

    The geographic isolation, absence of significant anthropogenic impacts, compressed spatial scale, and habitat diversity of Little Cayman combine to make it a natural laboratory for elucidating the dualistic impacts of various climatic events. These events both impart ecosystem disturbances and aid in the subsequent recovery of coral reef habitats. Within the isolated microcosm of Little Cayman the environmental factors commonly associated with coral stress, mortality, resilience and recovery hinted at by regional-scale observations can be more clearly observed. The primary thrust of this study is to reveal the under-pinning biophysical and hydrologic factors pertinent to reef resilience and to better understand the various roles played by climatic disturbances that have led to the rapid recovery of corals at Little Cayman following a spate of high temperature anomalies. Six closely-spaced high-temperature events were recorded in the Caribbean between the years of 1987 and 2009. Of these, only the 1998 global ENSO event, with well-documented levels of elevated SST, reduced cloud cover and surface water texture with concomittant increases in UV and irradiance and reduced water velocity, resulted in significant mortality at Little Cayman. Following this event, island-wide live coral cover decreased by 40%, from 26% to 14%. Annual monitoring of live coral cover following the 1998 ENSO event revealed no significant recovery of live coral cover until 2009, at which point there was a rapid rebound to pre-disturbance levels by 2011. Such a protracted step-change in coral recovery is indicative of one or more episodic events. The proposed scenario is that the numerous thermal stress events damaged the photo-system of the zooxanthellae, limiting the scope for growth and recovery as the metabolic budgets of corals were diverted to cellular repair. It is posited that the rapid cooling effect of frequent Tropical Storms and Hurricanes between 2002 - 2008, coupled with the

  5. Microbial Regulation in Gorgonian Corals

    Directory of Open Access Journals (Sweden)

    Laura D. Mydlarz

    2012-06-01

    Full Text Available Gorgonian corals possess many novel natural products that could potentially mediate coral-bacterial interactions. Since many bacteria use quorum sensing (QS signals to facilitate colonization of host organisms, regulation of prokaryotic cell-to-cell communication may represent an important bacterial control mechanism. In the present study, we examined extracts of twelve species of Caribbean gorgonian corals, for mechanisms that regulate microbial colonization, such as antibacterial activity and QS regulatory activity. Ethanol extracts of gorgonians collected from Puerto Rico and the Florida Keys showed a range of both antibacterial and QS activities using a specific Pseudomonas aeruginosa QS reporter, sensitive to long chain AHLs and a short chain N-acylhomoserine lactones (AHL biosensor, Chromobacterium violaceium. Overall, the gorgonian corals had higher antimicrobial activity against non-marine strains when compared to marine strains. Pseudopterogorgia americana, Pseusopterogorgia acerosa, and Pseudoplexuara flexuosa had the highest QS inhibitory effect. Interestingly, Pseudoplexuara porosa extracts stimulated QS activity with a striking 17-fold increase in signal. The stimulation of QS by P. porosa or other elements of the holobiont may encourage colonization or recruitment of specific microbial species. Overall, these results suggest the presence of novel stimulatory QS, inhibitory QS and bactericidal compounds in gorgonian corals. A better understanding of these compounds may reveal insight into coral-microbial ecology and whether a therapeutic potential exists.

  6. Histological Examination of Precious Corals from the Ryukyu Archipelago

    Directory of Open Access Journals (Sweden)

    Masanori Nonaka

    2012-01-01

    Full Text Available In this paper we examined the histology of three commercially valuable species of precious corals (Paracorallium japonicum, Corallium elatius, and C. konojoi from the Ryukyu Archipelago. In order to observe their inner structure, samples were thin sectioned and examined with a digital light microscope. Colonies of C. konojoi had thicker coenenchyme and larger autozooids than those of C. elatius and P. japonicum. The sclerites of the three species tended to be concentrated in the outer layers of coenenchyme. The gastric cavities of autozooids of all three species were found to be relatively empty. Some symbiotic polychates were observed in the axis of P. japonicum. As well, a zoanthid (Corallizoanthus tsukaharai was often observed living on the coenenchyme surface of P. japonicum. It is hoped our observations will provide a good foundation of future study of Japanese Coralliidae corals.

  7. Hypoxia tolerance and air-breathing ability correlate with habitat preference in coral-dwelling fishes

    Science.gov (United States)

    Nilsson, G. E.; Hobbs, J.-P. A.; Östlund-Nilsson, S.; Munday, P. L.

    2007-06-01

    Hypoxia tolerance and air-breathing occur in a range of freshwater, estuarine and intertidal fishes. Here it is shown for the first time that coral reef fishes from the genera Gobiodon, Paragobiodon and Caracanthus, which all have an obligate association with living coral, also exhibit hypoxia tolerance and a well-developed air-breathing capacity. All nine species maintained adequate respiration in water at oxygen concentrations down to 15-25% air saturation. This hypoxia tolerance is probably needed when the oxygen levels in the coral habitat drops sharply at night. Air-breathing abilities of the species correlated with habitat association, being greatest (equaling oxygen uptake in water) in species that occupy corals extending into shallow water, where they may become air exposed during extreme low tides. Air-breathing was less well-developed or absent in species inhabiting corals from deeper waters. Loss of scales and a network of subcutaneous capillaries appear to be key adaptations allowing cutaneous respiration in air. While hypoxia tolerance may be an ancestral trait in these fishes, air-breathing is likely to be a more recent adaptation exemplifying convergent evolution in the unrelated genera Gobiodon and Caracanthus in response to coral-dwelling lifestyles.

  8. Coral reefs in the Anthropocene.

    Science.gov (United States)

    Hughes, Terry P; Barnes, Michele L; Bellwood, David R; Cinner, Joshua E; Cumming, Graeme S; Jackson, Jeremy B C; Kleypas, Joanie; van de Leemput, Ingrid A; Lough, Janice M; Morrison, Tiffany H; Palumbi, Stephen R; van Nes, Egbert H; Scheffer, Marten

    2017-05-31

    Coral reefs support immense biodiversity and provide important ecosystem services to many millions of people. Yet reefs are degrading rapidly in response to numerous anthropogenic drivers. In the coming centuries, reefs will run the gauntlet of climate change, and rising temperatures will transform them into new configurations, unlike anything observed previously by humans. Returning reefs to past configurations is no longer an option. Instead, the global challenge is to steer reefs through the Anthropocene era in a way that maintains their biological functions. Successful navigation of this transition will require radical changes in the science, management and governance of coral reefs.

  9. Monitoring coral reefs, seagrasses and mangroves in Costa Rica (CARICOMP

    Directory of Open Access Journals (Sweden)

    Jorge Cortés

    2010-10-01

    Full Text Available The coral reefs, seagrasses and mangroves from the Costa Rican Caribbean coast have been monitored since 1999 using the CARICOMP protocol. Live coral cover at Meager Shoal reef bank (7 to 10m depth at the Parque Nacional Cahuita (National Park, increased from 13.3% in 1999, to 28.2% in 2003, but decreased during the next 5 years to around 17.5%. Algal cover increased significantly since 2003 from 36.6% to 61.3% in 2008. The density of Diadema antillarum oscillated between 2 and 7ind/m2, while Echinometra viridis decreased significantly from 20 to 0.6ind/m2. Compared to other CARICOMP sites, live coral cover, fish diversity and density, and sea urchin density were low, and algal cover was intermediate. The seagrass site, also in the Parque Nacional Cahuita, is dominated by Thalassia testudinum and showed an intermediate productivity (2.7±1.15 g/m2/d and biomass (822.8±391.84 g/m2 compared to other CARICOMP sites. Coral reefs and seagrasses at the Parque Nacional Cahuita continue to be impacted by high sediment loads from terrestrial origin. The mangrove forest at Gandoca, within the Refugio Nacional de Vida Silvestre Gandoca-Manzanillo (National Wildlife Refuge, surrounds a lagoon and it is dominated by the red mangrove, Rhizophora mangle. Productivity and flower production peak was in July. Biomass (14kg/m2 and density (9.0±0.58 trees/100m2 in Gandoca were relatively low compared to other CARICOMP sites, while productivity in July in Costa Rica (4g/m2/d was intermediate, similar to most CARICOMP sites. This mangrove is expanding and has low human impact thus far. Management actions should be taken to protect and preserve these important coastal ecosystems. Rev. Biol. Trop. 58 (Suppl. 3: 1-22. Epub 2010 October 01.

  10. Dongsha Atoll: A potential thermal refuge for reef-building corals in the South China Sea.

    Science.gov (United States)

    Tkachenko, Konstantin S; Soong, Keryea

    2017-06-01

    Dongsha Atoll (also known as the Pratas Islands), the northernmost atoll in the South China Sea, experiences two contrasting physical phenomena: repetitive anomalies of the sea surface temperature exceeding the coral bleaching threshold and regular effects of the world's strongest internal waves resulting in the rhythmic upwelling of cold deep waters at the outer reef slopes of the atoll. This unique combination may result in significant differences in coral species composition and structure between the lagoon and forereef. Surveys conducted in August-September 2016 at 12 study sites in the 2-15 m depth range at Dongsha Atoll revealed a clear spatial separation between 'thermally-susceptible' stony coral genera, including Acropora, Pocillopora and Montipora, which mainly inhabited the forereef, and 'thermally-resistant' genera, including massive Porites, foliaceous Echinopora, Pavona and Turbinaria, which mainly resided in the lagoon. The mean coral cover and species richness on the forereef were respectively 1.8 and 1.4 times higher than those in the lagoon (61.3% and 98 species on the forereef vs. 34.2% and 69 species in the lagoon). Coral mortality rates, expressed as the ratio of dead to live stony corals, showed the same pattern (0.4 in the lagoon vs. 0.009 on the forereef). Furthermore, in a laboratory experiment, 'thermally-susceptible' taxa from the lagoon, (e.g. Pocillopora verrucosa and P. damicornis), exhibited higher resistance to bleaching than did their counterparts from the forereef. The present findings indicate that Dongsha Atoll is a potential thermal refuge for reef-building corals in the northern South China Sea and reveal the development of resilience and resistance to bleaching in coral communities of the lagoon. Copyright © 2017 Elsevier Ltd. All rights reserved.

  11. Reconstructing surface ocean circulation with 129I time series records from corals.

    Science.gov (United States)

    Chang, Ching-Chih; Burr, George S; Jull, A J Timothy; Russell, Joellen L; Biddulph, Dana; White, Lara; Prouty, Nancy G; Chen, Yue-Gau; Shen, Chuan-Chou; Zhou, Weijian; Lam, Doan Dinh

    2016-12-01

    The long-lived radionuclide 129 I (half-life: 15.7 × 10 6  yr) is well-known as a useful environmental tracer. At present, the global 129 I in surface water is about 1-2 orders of magnitude higher than pre-1960 levels. Since the 1990s, anthropogenic 129 I produced from industrial nuclear fuels reprocessing plants has been the primary source of 129 I in marine surface waters of the Atlantic and around the globe. Here we present four coral 129 I time series records from: 1) Con Dao and 2) Xisha Islands, the South China Sea, 3) Rabaul, Papua New Guinea and 4) Guam. The Con Dao coral 129 I record features a sudden increase in 129 I in 1959. The Xisha coral shows similar peak values for 129 I as the Con Dao coral, punctuated by distinct low values, likely due to the upwelling in the central South China Sea. The Rabaul coral features much more gradual 129 I increases in the 1970s, similar to a published record from the Solomon Islands. The Guam coral 129 I record contains the largest measured values for any site, with two large peaks, in 1955 and 1959. Nuclear weapons testing was the primary 129 I source in the Western Pacific in the latter part of the 20th Century, notably from testing in the Marshall Islands. The Guam 1955 peak and Con Dao 1959 increases are likely from the 1954 Castle Bravo test, and the Operation Hardtack I test is the most likely source of the 1959 peak observed at Guam. Radiogenic iodine found in coral was carried primarily through surface ocean currents. The coral 129 I time series data provide a broad picture of the surface distribution and depth penetration of 129 I in the Pacific Ocean over the past 60 years. Copyright © 2016 The Authors. Published by Elsevier Ltd.. All rights reserved.

  12. CORAL Server and CORAL Server Proxy: Scalable Access to Relational Databases from CORAL Applications

    International Nuclear Information System (INIS)

    Valassi, A; Kalkhof, A; Bartoldus, R; Salnikov, A; Wache, M

    2011-01-01

    The CORAL software is widely used at CERN by the LHC experiments to access the data they store on relational databases, such as Oracle. Two new components have recently been added to implement a model involving a middle tier 'CORAL server' deployed close to the database and a tree of 'CORAL server proxies', providing data caching and multiplexing, deployed close to the client. A first implementation of the two new components, released in the summer 2009, is now deployed in the ATLAS online system to read the data needed by the High Level Trigger, allowing the configuration of a farm of several thousand processes. This paper reviews the architecture of the software, its development status and its usage in ATLAS.

  13. The cumulative impact of annual coral bleaching can turn some coral species winners into losers.

    Science.gov (United States)

    Grottoli, Andréa G; Warner, Mark E; Levas, Stephen J; Aschaffenburg, Matthew D; Schoepf, Verena; McGinley, Michael; Baumann, Justin; Matsui, Yohei

    2014-12-01

    Mass coral bleaching events caused by elevated seawater temperatures result in extensive coral loss throughout the tropics, and are projected to increase in frequency and severity. If bleaching becomes an annual event later in this century, more than 90% of coral reefs worldwide may be at risk of long-term degradation. While corals can recover from single isolated bleaching and can acclimate to recurring bleaching events that are separated by multiple years, it is currently unknown if and how they will survive and possibly acclimatize to annual coral bleaching. Here, we demonstrate for the first time that annual coral bleaching can dramatically alter thermal tolerance in Caribbean corals. We found that high coral energy reserves and changes in the dominant algal endosymbiont type (Symbiodinium spp.) facilitated rapid acclimation in Porites divaricata, whereas low energy reserves and a lack of algal phenotypic plasticity significantly increased susceptibility in Porites astreoides to bleaching the following year. Phenotypic plasticity in the dominant endosymbiont type of Orbicella faveolata did not prevent repeat bleaching, but may have facilitated rapid recovery. Thus, coral holobiont response to an isolated single bleaching event is not an accurate predictor of its response to bleaching the following year. Rather, the cumulative impact of annual coral bleaching can turn some coral species 'winners' into 'losers', and can also facilitate acclimation and turn some coral species 'losers' into 'winners'. Overall, these findings indicate that cumulative impact of annual coral bleaching could result in some species becoming increasingly susceptible to bleaching and face a long-term decline, while phenotypically plastic coral species will acclimatize and persist. Thus, annual coral bleaching and recovery could contribute to the selective loss of coral diversity as well as the overall decline of coral reefs in the Caribbean. © 2014 John Wiley & Sons Ltd.

  14. Calcification process dynamics in coral primary polyps as observed using a calcein incubation method

    Directory of Open Access Journals (Sweden)

    Yoshikazu Ohno

    2017-03-01

    Full Text Available Calcification processes are largely unknown in scleractinian corals. In this study, live confocal imaging was used to elucidate the spatiotemporal dynamics of the calcification process in aposymbiotic primary polyps of the coral species Acropora digitifera. The fluorophore calcein was used as a calcium deposition marker and a visible indicator of extracellular fluid distribution at the tissue-skeleton interface (subcalicoblastic medium, SCM in primary polyp tissues. Under continuous incubation in calcein-containing seawater, initial crystallization and skeletal growth were visualized among the calicoblastic cells in live primary polyp tissues. Additionally, the distribution of calcein-stained SCM and contraction movements of the pockets of SCM were captured at intervals of a few minutes. Our experimental system provided several new insights into coral calcification, particularly as a first step in monitoring the relationship between cellular dynamics and calcification in vivo. Our study suggests that coral calcification initiates at intercellular spaces, a finding that may contribute to the general understanding of coral calcification processes.

  15. Morphology of a coral bank, western continental shelf of India: A multibeam study

    Digital Repository Service at National Institute of Oceanography (India)

    Rao, P.S.; Kodagali, V.N.; Ramprasad, T.; Nair, R.R.

    Morphology of a living coral bank (Gaveshani Bank) is described using multibeam swath bathymetric survey system Hydrosweep. The bank has a height of 42 m, length of 2 km and a maximum width of 1.66 km, with steep flanks and flat top. It has a north...

  16. Negative effect of gardening damselfish Stegastes planifrons on coral health depend on predator abundance

    NARCIS (Netherlands)

    Vermeij, M.J.A.; Debey, H.; Grimsditch, G.; Brown, J.; Obura, D.; DeLeon, R.; Sandin, S.A.

    2015-01-01

    On Bonaire, we studied the effects of predator abundance and habitat availability on the abundance of the threespot damselfish Stegastes planifrons, a species that creates algal gardens at the expense of live coral cover. Across 21 sites, predator biomass ranged from 12 to 193 g m-2 (mean = 55.1; SD

  17. Quantifying Coral Reef Ecosystem Services

    Science.gov (United States)

    Coral reefs have been declining during the last four decades as a result of both local and global anthropogenic stresses. Numerous research efforts to elucidate the nature, causes, magnitude, and potential remedies for the decline have led to the widely held belief that the recov...

  18. Sharing the slope: depth partitioning of agariciid corals and associated

    NARCIS (Netherlands)

    Bongaerts, P.; Frade, P.R.; Ogier, J.J.; Hay, K.B.; van Bleijswijk, J.; Englebert, N.; Vermeij, M.J.A.; Bak, R.P.M.; Visser, P.M.; Hoegh-Guldberg, O.

    2013-01-01

    Background: Scleractinian corals and their algal endosymbionts (genus Symbiodinium) exhibit distinct bathymetric distributions on coral reefs. Yet, few studies have assessed the evolutionary context of these ecological distributions by exploring the genetic diversity of closely related coral species

  19. Threatened corals provide underexplored microbial habitats.

    Directory of Open Access Journals (Sweden)

    Shinichi Sunagawa

    2010-03-01

    Full Text Available Contemporary in-depth sequencing of environmental samples has provided novel insights into microbial community structures, revealing that their diversity had been previously underestimated. Communities in marine environments are commonly composed of a few dominant taxa and a high number of taxonomically diverse, low-abundance organisms. However, studying the roles and genomic information of these "rare" organisms remains challenging, because little is known about their ecological niches and the environmental conditions to which they respond. Given the current threat to coral reef ecosystems, we investigated the potential of corals to provide highly specialized habitats for bacterial taxa including those that are rarely detected or absent in surrounding reef waters. The analysis of more than 350,000 small subunit ribosomal RNA (16S rRNA sequence tags and almost 2,000 nearly full-length 16S rRNA gene sequences revealed that rare seawater biosphere members are highly abundant or even dominant in diverse Caribbean corals. Closely related corals (in the same genus/family harbored similar bacterial communities. At higher taxonomic levels, however, the similarities of these communities did not correlate with the phylogenetic relationships among corals, opening novel questions about the evolutionary stability of coral-microbial associations. Large proportions of OTUs (28.7-49.1% were unique to the coral species of origin. Analysis of the most dominant ribotypes suggests that many uncovered bacterial taxa exist in coral habitats and await future exploration. Our results indicate that coral species, and by extension other animal hosts, act as specialized habitats of otherwise rare microbes in marine ecosystems. Here, deep sequencing provided insights into coral microbiota at an unparalleled resolution and revealed that corals harbor many bacterial taxa previously not known. Given that two of the coral species investigated are listed as threatened under

  20. NOAA's Coral Reef Conservation Program: 2016 projects to address coral reef conservation issues

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — In 2016 the following projects will take place to address aspects of coral reef conservation: Enhancing Management of Pacific ESA-listed Corals with Improved Utility...

  1. EOP Settlement colonization and succession patterns of gold coral Kulamana haumeaae in Hawaiian deep coral assemblages

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Relational tabular data on corals relevant to the parasitic life history of gold coral. Surveys conducted throughout the Hawaiian Archipelago with attention on...

  2. Deep-sea scleractinian coral age and depth distributions in the northwest Atlantic for the last 225,000 years

    Science.gov (United States)

    Robinson, L.F.; Adkins, J.F.; Scheirer, D.S.; Fernandez, D.P.; Gagnon, A.; Waller, R.G.

    2007-01-01

    Deep-sea corals have grown for over 200,000 yrs on the New England Seamounts in the northwest Atlantic, and this paper describes their distribution both with respect to depth and time. Many thousands of fossil scleractinian corals were collected on a series of cruises from 2003-2005; by contrast, live ones were scarce. On these seamounts, the depth distribution of fossil Desmophyllum dianthus (Esper, 1794) is markedly different to that of the colonial scleractinian corals, extending 750 m deeper in the water column to a distinct cut-off at 2500 m. This cut-off is likely to be controlled by the maximum depth of a notch-shaped feature in the seamount morphology. The ages of D. dianthus corals as determined by U-series measurements range from modern to older than 200,000 yrs. The age distribution is not constant over time, and most corals have ages from the last glacial period. Within the glacial period, increases in coral population density at Muir and Manning Seamounts coincided with times at which large-scale ocean circulation changes have been documented in the deep North Atlantic. Ocean circulation changes have an effect on coral distributions, but the cause of the link is not known. ?? 2007 Rosenstiel School of Marine and Atmospheric Science of the University of Miami.

  3. How to evaluate the carbon cycle in coral-reef ecosystems. Sangosho ni okeru sanso junkan kenkyu no kadai

    Energy Technology Data Exchange (ETDEWEB)

    Yamamuro, M [Geological Survey of Japan, Tsukuba (Japan)

    1993-05-01

    This paper describes problems concerning carbon balance and nutrient salt in coral reefs. Coral reefs fix CO2 in two forms of organic matters and calcium carbonates. It is reported that 10% of organic matters fixed by photosynthesis may either be buried in deposits on coral reefs or flow out into open seas. Quantification of the carbon balance in coral reefs has a problem of handling organic matters in calcium carbonate skeletons as products, and a problem related to evaluation of organic matters flown out from ecological systems. Corals provide, through building foundations at shallow depths, living organisms carrying out photosynthesis with locations abundant in quantity of light. Coral reefs are thought to accumulate nutrients in their skeletons or in the foundations for deposits. They would hold nitrogen in them through nitrogen fixation, and maintain phosphor production at high levels by retaining nitrogen-to-phosphor ratio which is relatively lower than in other ecological systems. Coral reefs provide foundations to transparent sea water with extremely small amount of phytoplankton, and favorable environment for large-size animals and algae. 21 refs., 2 figs.

  4. Coral mucus fuels the sponge loop in warm- and cold-water coral reef ecosystems

    NARCIS (Netherlands)

    Rix, L.; de Goeij, J.M.; Mueller, C.E.; Struck, U.; Middelburg, J.J.; van Duyl, F.C.; Al-Horani, F.A.; Wild, C.; Naumann, M.S.; Van Oevelen, D.

    2016-01-01

    Shallow warm-water and deep-sea cold-water corals engineer the coral reef framework and fertilize reef communities by releasing coral mucus, a source of reef dissolved organic matter (DOM). By transforming DOM into particulate detritus, sponges play a key role in transferring the energy and

  5. Patterns of coral bleaching: Modeling the adaptive bleaching hypothesis

    Science.gov (United States)

    Ware, J.R.; Fautin, D.G.; Buddemeier, R.W.

    1996-01-01

    Bleaching - the loss of symbiotic dinoflagellates (zooxanthellae) from animals normally possessing them - can be induced by a variety of stresses, of which temperature has received the most attention. Bleaching is generally considered detrimental, but Buddemeier and Fautin have proposed that bleaching is also adaptive, providing an opportunity for recombining hosts with alternative algal types to form symbioses that might be better adapted to altered circumstances. Our mathematical model of this "adaptive bleaching hypothesis" provides insight into how animal-algae symbioses might react under various circumstances. It emulates many aspects of the coral bleaching phenomenon including: corals bleaching in response to a temperature only slightly greater than their average local maximum temperature; background bleaching; bleaching events being followed by bleaching of lesser magnitude in the subsequent one to several years; higher thermal tolerance of corals subject to environmental variability compared with those living under more constant conditions; patchiness in bleaching; and bleaching at temperatures that had not previously resulted in bleaching. ?? 1996 Elsevier Science B.V. All rights reserved.

  6. Amphibious Encounters: Coral and People in Conservation Outreach in Indonesia

    Directory of Open Access Journals (Sweden)

    Annet Pauwelussen

    2017-05-01

    Full Text Available Drawing on long-term ethnographic research in Indonesia, this article describes a conservation outreach project that attempts to educate and convert local people into coral protectors. Both coral and the sea-dwelling Bajau people appear to be amphibious beings, moving between a changeable land-water interface, and between different, fluidly interwoven ontological constellations. We show that the failure of conservation organizations to recognize the ontologically ambiguous nature of “coral” and “people” translates to a breakdown of outreach goals. Mobilizing the concept of amphibiousness to engage this ambiguity and fluidity, we describe the moving land-water interface as the actual living environment for both coral and people. The notion of amphibiousness, we suggest, has practical and political value, in particular for reconsidering outreach and how it may be reframed as a process involving ontological dialogue. For conservation outreach to become seaworthy, it needs to cultivate an amphibious capacity, capable of moving in-between and relating partly overflowing ways of knowing and being. Providing room for ambiguity, thinking with amphibiousness furthermore encourages suspension of the (Western tendency to explain the Other, to fix what does not add up. As such, it is of heuristic relevance for the on-going discussions of ontological multiplicity that have proliferated at the intersection between STS and anthropology.

  7. Beneficial Microorganisms for Corals (BMC): Proposed Mechanisms for Coral Health and Resilience.

    Science.gov (United States)

    Peixoto, Raquel S; Rosado, Phillipe M; Leite, Deborah Catharine de Assis; Rosado, Alexandre S; Bourne, David G

    2017-01-01

    The symbiotic association between the coral animal and its endosymbiotic dinoflagellate partner Symbiodinium is central to the success of corals. However, an array of other microorganisms associated with coral (i.e., Bacteria, Archaea, Fungi, and viruses) have a complex and intricate role in maintaining homeostasis between corals and Symbiodinium . Corals are sensitive to shifts in the surrounding environmental conditions. One of the most widely reported responses of coral to stressful environmental conditions is bleaching. During this event, corals expel Symbiodinium cells from their gastrodermal tissues upon experiencing extended seawater temperatures above their thermal threshold. An array of other environmental stressors can also destabilize the coral microbiome, resulting in compromised health of the host, which may include disease and mortality in the worst scenario. However, the exact mechanisms by which the coral microbiome supports coral health and increases resilience are poorly understood. Earlier studies of coral microbiology proposed a coral probiotic hypothesis, wherein a dynamic relationship exists between corals and their symbiotic microorganisms, selecting for the coral holobiont that is best suited for the prevailing environmental conditions. Here, we discuss the microbial-host relationships within the coral holobiont, along with their potential roles in maintaining coral health. We propose the term BMC (Beneficial Microorganisms for Corals) to define (specific) symbionts that promote coral health. This term and concept are analogous to the term Plant Growth Promoting Rhizosphere (PGPR), which has been widely explored and manipulated in the agricultural industry for microorganisms that inhabit the rhizosphere and directly or indirectly promote plant growth and development through the production of regulatory signals, antibiotics and nutrients. Additionally, we propose and discuss the potential mechanisms of the effects of BMC on corals, suggesting

  8. The Use of Diethanolamine as a Co2 Absorbent in Was Take the Determination Coral Reef Age in Barrang Lompo Island Spermonde Islands Through Measurements of 14c Activity by Liquid Scintillation Counting (Lsc) Method

    OpenAIRE

    Matande, Jumiati Bunga; Zakir, Muhammad; Noor, Alfian

    2017-01-01

    Research on the use of diethanolamine (DEA) as a CO2 absorbent in was take the determination coral reef age in Barrang Lompo Island, Spermonde Islands through measurements of 14C activity by liquid scintillation Counting method (LSC) was carried our. Coral reef sample of the island Barrang Lompo at coordinates 5 ° 06 '49 " LS 119 ° 25' 20" BT with a dept of 3-4 meters from the sea surface. Coral reefs (coral reef) is an ecosystem that live on the water in the form of limestone formations (CaC...

  9. Algae as reservoirs for coral pathogens.

    Directory of Open Access Journals (Sweden)

    Michael J Sweet

    Full Text Available Benthic algae are associated with coral death in the form of stress and disease. It's been proposed that they release exudates, which facilitate invasion of potentially pathogenic microbes at the coral-algal interface, resulting in coral disease. However, the original source of these pathogens remains unknown. This study examined the ability of benthic algae to act as reservoirs of coral pathogens by characterizing surface associated microbes associated with major Caribbean and Indo-Pacific algal species/types and by comparing them to potential pathogens of two dominant coral diseases: White Syndrome (WS in the Indo-Pacific and Yellow Band Disease (YBD in the Caribbean. Coral and algal sampling was conducted simultaneously at the same sites to avoid spatial effects. Potential pathogens were defined as those absent or rare in healthy corals, increasing in abundance in healthy tissues adjacent to a disease lesion, and dominant in disease lesions. Potentially pathogenic bacteria were detected in both WS and YBD and were also present within the majority of algal species/types (54 and 100% for WS and YBD respectively. Pathogenic ciliates were associated only with WS and not YBD lesions and these were also present in 36% of the Indo-Pacific algal species. Although potential pathogens were associated with many algal species, their presence was inconsistent among replicate algal samples and detection rates were relatively low, suggestive of low density and occurrence. At the community level, coral-associated microbes irrespective of the health of their host differed from algal-associated microbes, supporting that algae and corals have distinctive microbial communities associated with their tissue. We conclude that benthic algae are common reservoirs for a variety of different potential coral pathogens. However, algal-associated microbes alone are unlikely to cause coral death. Initial damage or stress to the coral via other competitive mechanisms is

  10. Large-scale coral recruitment patterns on Mona Island, Puerto Rico: evidence of a transitional community trajectory after massive coral bleaching and mortality

    Directory of Open Access Journals (Sweden)

    Edwin A. Hernández-Delgado

    2014-09-01

    Full Text Available Coral reefs have largely declined across the northeastern Caribbean following the 2005 massive bleaching event. Climate change-related sea surface warming and coral disease outbreaks of a white plague-like syndrome and of yellow band disease (YBD have caused significant coral decline affecting massive reef building species (i.e., Orbicella annularis species complex which show no apparent signs of recovery through larval sexual recruitment. We addressed coral recruit densities across three spur and groove reef locations along the western shelf of remote Mona Island, Puerto Rico: Punta Capitán (PCA, Pasa de Las Carmelitas (PLC, and Las Carmelitas-South (LCS. Data were collected during November 2012 along 93 haphazard transects across three depth zones (<5m, 5-10m, 10-15m. A total of 32 coral species (9 octocorals, 1 hydrocoral, 22 scleractinians were documented among the recruit community. Communities had low densities and dominance by short-lived brooder species seven years after the 2005 event. Mean coral recruit density ranged from 1.2 to 10.5/m2 at PCA, 6.3 to 7.2/m² at LCS, 4.5 to 9.5/m² at PLC. Differences in coral recruit community structure can be attributed to slight variation in percent macroalgal cover and composition as study sites had nearly similar benthic spatial heterogeneity. Dominance by ephemeral coral species was widespread. Recovery of largely declining massive reef-building species such as the O. annularis species complex was limited or non-existent. The lack of recovery could be the combined result of several mechanisms involving climate change, YBD disease, macroalgae, fishing, urchins and Mona Island’s reefs limited connectivity to other reef systems. There is also for rehabilitation of fish trophic structure, with emphasis in recovering herbivore guilds and depleted populations of D. antillarum. Failing to recognize the importance of ecosystem-based management and resilience rehabilitation may deem remote coral reefs

  11. Amorphous calcium carbonate particles form coral skeletons

    Science.gov (United States)

    Mass, Tali; Giuffre, Anthony J.; Sun, Chang-Yu; Stifler, Cayla A.; Frazier, Matthew J.; Neder, Maayan; Tamura, Nobumichi; Stan, Camelia V.; Marcus, Matthew A.; Gilbert, Pupa U. P. A.

    2017-09-01

    Do corals form their skeletons by precipitation from solution or by attachment of amorphous precursor particles as observed in other minerals and biominerals? The classical model assumes precipitation in contrast with observed “vital effects,” that is, deviations from elemental and isotopic compositions at thermodynamic equilibrium. Here, we show direct spectromicroscopy evidence in Stylophora pistillata corals that two amorphous precursors exist, one hydrated and one anhydrous amorphous calcium carbonate (ACC); that these are formed in the tissue as 400-nm particles; and that they attach to the surface of coral skeletons, remain amorphous for hours, and finally, crystallize into aragonite (CaCO3). We show in both coral and synthetic aragonite spherulites that crystal growth by attachment of ACC particles is more than 100 times faster than ion-by-ion growth from solution. Fast growth provides a distinct physiological advantage to corals in the rigors of the reef, a crowded and fiercely competitive ecosystem. Corals are affected by warming-induced bleaching and postmortem dissolution, but the finding here that ACC particles are formed inside tissue may make coral skeleton formation less susceptible to ocean acidification than previously assumed. If this is how other corals form their skeletons, perhaps this is how a few corals survived past CO2 increases, such as the Paleocene-Eocene Thermal Maximum that occurred 56 Mya.

  12. A too acid world for coral reefs

    International Nuclear Information System (INIS)

    Allemand, D.; Reynaud, St.; Salvat, B.

    2010-01-01

    While briefly presenting how corals grow and exchange with their environment and after having recalled that temperature increase was already a threat for them, this article outlines that ocean acidification is now considered as another danger. This acidification is due to the dissolution in sea water of CO 2 produced by human activities. This entails a slower calcification which is the process by which corals grow their skeleton. But, some researches showed that some corals manage to survive normally in such acid conditions, and even without skeleton for some other species. Anyhow, coral reefs will tend to disappear with environmental and socio-economical consequences

  13. Physiological outperformance at the morphologically-transformed edge of the cyanobacteriosponge Terpios hoshinota (Suberitidae: Hadromerida when confronting opponent corals.

    Directory of Open Access Journals (Sweden)

    Jih-Terng Wang

    Full Text Available Terpios hoshinota, an encrusting cyanosponge, is known as a strong substrate competitor of reef-building corals that kills encountered coral by overgrowth. Terpios outbreaks cause significant declines in living coral cover in Indo-Pacific coral reefs, with the damage usually lasting for decades. Recent studies show that there are morphological transformations at a sponge's growth front when confronting corals. Whether these morphological transformations at coral contacts are involved with physiological outperformance (e.g., higher metabolic activity or nutritional status over other portions of Terpios remains equivocal. In this study, we compared the indicators of photosynthetic capability and nitrogen status of a sponge-cyanobacteria association at proximal, middle, and distal portions of opponent corals. Terpios tissues in contact with corals displayed significant increases in photosynthetic oxygen production (ca. 61%, the δ13C value (ca. 4%, free proteinogenic amino acid content (ca. 85%, and Gln/Glu ratio (ca. 115% compared to middle and distal parts of the sponge. In contrast, the maximum quantum yield (Fv/Fm, which is the indicator usually used to represent the integrity of photosystem II, of cyanobacteria photosynthesis was low (0.256~0.319 and showed an inverse trend of higher values in the distal portion of the sponge that might be due to high and variable levels of cyanobacterial phycocyanin. The inconsistent results between photosynthetic oxygen production and Fv/Fm values indicated that maximum quantum yields might not be a suitable indicator to represent the photosynthetic function of the Terpios-cyanobacteria association. Our data conclusively suggest that Terpios hoshinota competes with opponent corals not only by the morphological transformation of the sponge-cyanobacteria association but also by physiological outperformance in accumulating resources for the battle.

  14. Biogeochemical alteration effects on U/Th geochronology of Pleistocene corals, Penguin Bank, Molokai, Hawai`i

    Science.gov (United States)

    Herries, K.; Rubin, K. H.; Hellebrand, E.

    2017-12-01

    Meltwater Pulse 1a (MWP-1a) is a large, relatively fast sea level rise event that occurred during the last deglaciation. Critical questions remain about the exact timing of MWP-1a and can be answered using high precision geochronology. Coral reefs are able to yield ideal records of sea level and ocean changes during and after deposition. Glacial far-field fossilized coral reefs, such as the well-preserved Penguin Bank reef near Molokai, Hawai'i, provide understandings to past sea level events that are relatively unaffected by local deglacial sea level effects. Using uranium-thorium dating of pristine corals, we are able date sea level events to an error of ±25-50 years. However, most Penguin Bank coral samples have been biogeochemically disturbed by other mesophotic organisms either during their lifetime or after their death. In these samples, the main disturbances observed in hand specimen are (1) overgrowth by coralline algae, (2) bioerosion from boring organisms, (3) living organisms, like sponges, inside coral skeletons, and (4) discoloration due to detrital materials. These disturbances are capable of disrupting the concentration of U in the coral and/or δ 234U measured. Seawater alteration-sensitive ratios, such as Sr/Ca and Mg/Ca, act as a proxy for potential diagenetic effects on U distribution in the corals. U and Th isotopic data acquired on both pristine and altered parts of the corals are being used to determine the impacts of alteration in the measured ages. With these new data, it may be possible to derive a more accurate timing of MWP-1a and provide a more general method of determining the suitability of coral specimens for dating of the last deglaciation and past climate change.

  15. Field Spectroscopy And Spectral Analysis Of Caribbean Scleractinian Reef Corals And Related Benthic Biota

    Science.gov (United States)

    Torres-Perez, J. L.; Guild, L. S.; Armstrong, R.; Corredor, J. E.; Polanco, R.; Zuluaga-Montero, A. B.

    2013-05-01

    Coral reefs are highly heterogenic ecosystems with a plethora of photosynthetic organisms forming most of the benthic communities. Usually coral reef benthos is a composite of reef corals, different groups of algae, seagrasses, sandy bottoms, dead rubble, and even mangrove forests living in a relatively small area. The remote characterization of these important tropical ecosystems represents a challenge to scientists, particularly due to the similarity of the spectral signatures among some of these components. As such, we examined the similarities and differences between nine Scleractinian Caribbean shallow-water reef corals' spectral reflectance curves. Samples were also collected from each species for pigment analysis using High Performance Liquid Chromatography (HPLC). Reflectance curves were obtained with the aid of a GER-1500 hand-held field spectroradiometer enclosed in an underwater housing. Our findings showed that even though most of the pigmentation was directly related to the relationship of corals with their symbiotic dinoflagellates (zooxanthellae), the presence of other endolithic photosynthetic organisms can also contribute to the light absorption of corals and, hence, the reflectance spectra of each species. Also, the relative contribution of chlorophylls vs. carotenes or xanthophylls depends on the coral species with some species relying more on Chlorophyll a and other species relying on Chlorophyl c2 and Peridinin with a small Chlorophyll a component. Pigments associated with the xanthophyll cycle of dinoflagellates (Diadinoxanthin and Diatoxanthin) were detected in most species. Pigments typical of endolithic organisms such as Zeaxanthin, Fucoxanthin, Violaxanthin and Siphonaxanthin were also detected in some coral species. The influence of major pigments on the reflectance curve was evidenced with a 2nd derivative analysis. This could be used to discriminate among most species. Further, an analysis of the integration of the area under the

  16. Unlocking the coral calcification process: Insights from boron isotope measurements and a skeletal growth model

    Science.gov (United States)

    Mollica, N. R.; Guo, W.; Cohen, A. L.; Huang, K. F.; Foster, G. L.; Donald, H.; Solow, A.

    2017-12-01

    Carbonate skeletons of scleractinian corals are important archives of ocean climate and environmental change. However, corals don't accrete their skeletons directly from ambient seawater, but from a calcifying fluid whose composition is strongly regulated. There is mounting evidence that the carbonate chemistry of this calcifying fluid significantly impacts the amount of carbonate the coral can precipitate, which in turn affects the geochemical composition of the skeleton produced. However the mechanistic link between calcifying fluid (cf) chemistry, particularly the up-regulation of pHcf and thereby aragonite saturation state (Ωcf), and coral calcification is not well understood. We explored this link by combining boron isotope measurements with in situ measurements of seawater temperature, salinity, and DIC to estimate Ωcf of nine Porites corals from four Pacific reefs. Associated calcification rates were quantified for each core via CT scanning. We do not observe a relationship between calcification rates and Ωcf or Ωsw. Instead, when we deconvolve calcification into linear extension and skeletal density, a significant correlation is observed between density and Ωcf, and also Ωsw while extension does not correlate with either. These observations are consistent with the two-step model of coral calcification, in which skeleton is secreted in two distinct phases: vertical extension creating new skeletal elements, followed by lateral thickening of existing elements that are covered by living tissue. We developed a numerical model of Porites skeletal growth that builds on this two-step model and links skeletal density with the external seawater environment via its influence on the chemistry of coral calcifying fluid. We validated the model using existing coral skeletal datasets from six Porites species collected across five reef sites, and quantified the effects of each seawater parameter (e.g. temperature, pH, DIC) on skeletal density. Our findings illustrate

  17. Estimating bioerosion rate on fossil corals: a quantitative approach from Oligocene reefs (NW Italy)

    Science.gov (United States)

    Silvestri, Giulia

    2010-05-01

    Bioerosion of coral reefs, especially when related to the activity of macroborers, is considered to be one of the major processes influencing framework development in present-day reefs. Macroboring communities affecting both living and dead corals are widely distributed also in the fossil record and their role is supposed to be analogously important in determining flourishing vs demise of coral bioconstructions. Nevertheless, many aspects concerning environmental factors controlling the incidence of bioerosion, shifting in composition of macroboring communities and estimation of bioerosion rate in different contexts are still poorly documented and understood. This study presents an attempt to quantify bioerosion rate on reef limestones characteristic of some Oligocene outcrops of the Tertiary Piedmont Basin (NW Italy) and deposited under terrigenous sedimentation within prodelta and delta fan systems. Branching coral rubble-dominated facies have been recognized as prevailing in this context. Depositional patterns, textures, and the generally low incidence of taphonomic features, such as fragmentation and abrasion, suggest relatively quiet waters where coral remains were deposited almost in situ. Thus taphonomic signatures occurring on corals can be reliably used to reconstruct environmental parameters affecting these particular branching coral assemblages during their life and to compare them with those typical of classical clear-water reefs. Bioerosion is sparsely distributed within coral facies and consists of a limited suite of traces, mostly referred to clionid sponges and polychaete and sipunculid worms. The incidence of boring bivalves seems to be generally lower. Together with semi-quantitative analysis of bioerosion rate along vertical logs and horizontal levels, two quantitative methods have been assessed and compared. These consist in the elaboration of high resolution scanned thin sections through software for image analysis (Photoshop CS3) and point

  18. Rapid recovery of a coral dominated Eastern Tropical Pacific reef after experimentally produced anthropogenic disturbance.

    Science.gov (United States)

    Muthukrishnan, Ranjan; Fong, Peggy

    2018-05-07

    Local anthropogenic stressors such as overfishing, nutrient enrichment and increased sediment loading have been shown to push coral reefs toward greater dominance by algae. In a few cases this shift has been temporary, with the ability to recover to a healthy coral-dominated community after disturbance, suggesting some systems have considerable resilience. However, an understanding of the circumstances under which reefs may recover is only beginning to emerge. We monitored recovery of a coral-dominated reef in the Eastern Tropical Pacific (ETP) after cessation of a ∼6 month multiple stressor experiment (with herbivore exclosure, nutrient addition, and sediment addition). We observed substantial recovery from small-scale disturbances, though there were differences in both the extent and temporal dynamics of recovery between treatments. Plots that had been caged showed the largest recovery in absolute terms and recovery was quite rapid, while nutrient and sediment addition plots were slower to recover. We also observed different recovery patterns depending on the type of algae that replaced coral during or after disturbances. Macroalgae that established during manipulation were almost completely removed within 2 weeks, revealing that a significant proportion had covered still-living coral. Turf algae persisted longer, but were almost completely replaced by regenerating coral within 18 months. Very little crustose coralline algae were apparent during manipulations, but coverage did increase during recovery. This rapid recovery of corals after simulated anthropogenic disturbance to ETP reefs underscores the value of management of local stressors for short-term recovery and perhaps as a buffer for longer-term global stressors. Copyright © 2018 Elsevier Ltd. All rights reserved.

  19. Recovery from a near-lethal exposure to ultraviolet-C radiation in a scleractinian coral.

    Science.gov (United States)

    Basti, David; Bricknell, Ian; Beane, Dawna; Bouchard, Deborah

    2009-04-01

    Hermatypic (reef building) corals live in an environment characterized by high ambient levels of photosynthetically active radiation (PAR) and ultraviolet radiation (UVR). Photoadaptive mechanisms have evolved to protect the sensitive cell structures of the host coral and their photosynthetic, endosymbiotic zooxanthellae. Environmental stressors may destabilize the coral-zooxanthellae system resulting in the expulsion of zooxanthellae and/or loss of photosynthetic pigment within zooxanthellae, causing a condition known as bleaching. It is estimated that 1% of the world's coral population is lost yearly, partly due to bleaching. Despite intensive research efforts, a single unified mechanism cannot explain this phenomenon. Although UVA and UVB cellular damage is well documented, UVC damage is rarely reported due to its almost complete absorption in the stratosphere. A small scale coral propagation system at the University of Maine was accidentally exposed to 15.5h of UVC radiation (253.7 nm) from a G15T8 germicidal lamp, resulting in a cumulative surface irradiance of 8.39 x 10(4) J m(-2). An experiment was designed to monitor the progression of UVC induced damage. Branch sections from affected scleractinian corals, Acropora yongei and Acropora formosa were submitted to histopathology to provide an historical record of tissue response. The death of gastrodermal cells and necrosis resulted in the release of intracellular zooxanthellae into the gastrovascular canals. Zooxanthellae were also injured as evidenced by pale coloration, increased vacuolization and loss of membrane integrity. The recovery of damaged coral tissue likely proceeds by re-epithelialization and zooxanthellae repopulation of gastrodermal cells by adjacent healthy tissue.

  20. Coral Reef Color: Remote and In-Situ Imaging Spectroscopy of Reef Structure and Function

    Science.gov (United States)

    Hochberg, E. J.

    2016-02-01

    Coral reefs are threatened at local to global scales by a litany of anthropogenic impacts, including overfishing, coastal development, marine and watershed pollution, rising ocean temperatures, and ocean acidification. However, available data for the primary indicator of coral reef condition — proportional cover of living coral — are surprisingly sparse and show patterns that contradict the prevailing understanding of how environment impacts reef condition. Remote sensing is the only available tool for acquiring synoptic, uniform data on reef condition at regional to global scales. Discrimination between coral and other reef benthos relies on narrow wavebands afforded by imaging spectroscopy. The same spectral information allows non-invasive quantification of photosynthetic pigment composition, which shows unexpected phenological trends. There is also potential to link biodiversity with optical diversity, though there has been no effort in that direction. Imaging spectroscopy underlies the light-use efficiency model for reef primary production by quantifying light capture, which in turn indicates biochemical capacity for CO2 assimilation. Reef calcification is strongly correlated with primary production, suggesting the possibility for an optics-based model of that aspect of reef function, as well. By scaling these spectral models for use with remote sensing, we can vastly improve our understanding of reef structure, function, and overall condition across regional to global scales. By analyzing those remote sensing products against ancillary environmental data, we can construct secondary models to predict reef futures in the era of global change. This final point is the objective of CORAL (COral Reef Airborne Laboratory), a three-year project funded under NASA's Earth Venture Suborbital-2 program to investigate the relationship between coral reef condition at the ecosystem scale and various nominal biogeophysical forcing parameters.

  1. Climate warming, marine protected areas and the ocean-scale integrity of coral reef ecosystems.

    Directory of Open Access Journals (Sweden)

    Nicholas A J Graham

    Full Text Available Coral reefs have emerged as one of the ecosystems most vulnerable to climate variation and change. While the contribution of a warming climate to the loss of live coral cover has been well documented across large spatial and temporal scales, the associated effects on fish have not. Here, we respond to recent and repeated calls to assess the importance of local management in conserving coral reefs in the context of global climate change. Such information is important, as coral reef fish assemblages are the most species dense vertebrate communities on earth, contributing critical ecosystem functions and providing crucial ecosystem services to human societies in tropical countries. Our assessment of the impacts of the 1998 mass bleaching event on coral cover, reef structural complexity, and reef associated fishes spans 7 countries, 66 sites and 26 degrees of latitude in the Indian Ocean. Using Bayesian meta-analysis we show that changes in the size structure, diversity and trophic composition of the reef fish community have followed coral declines. Although the ocean scale integrity of these coral reef ecosystems has been lost, it is positive to see the effects are spatially variable at multiple scales, with impacts and vulnerability affected by geography but not management regime. Existing no-take marine protected areas still support high biomass of fish, however they had no positive affect on the ecosystem response to large-scale disturbance. This suggests a need for future conservation and management efforts to identify and protect regional refugia, which should be integrated into existing management frameworks and combined with policies to improve system-wide resilience to climate variation and change.

  2. Identification of scleractinian coral recruits using fluorescent censusing and DNA barcoding techniques.

    Directory of Open Access Journals (Sweden)

    Chia-Min Hsu

    Full Text Available The identification of coral recruits has been problematic due to a lack of definitive morphological characters being available for higher taxonomic resolution. In this study, we tested whether fluorescent detection of coral recruits used in combinations of different DNA-barcoding markers (cytochrome oxidase I gene [COI], open reading frame [ORF], and nuclear Pax-C intron [PaxC] could be useful for increasing the resolution of coral spat identification in ecological studies. One hundred and fifty settlement plates were emplaced at nine sites on the fringing reefs of Kenting National Park in southern Taiwan between April 2011 and September 2012. A total of 248 living coral spats and juveniles (with basal areas ranging from 0.21 to 134.57 mm(2 were detected on the plates with the aid of fluorescent light and collected for molecular analyses. Using the COI DNA barcoding technique, 90.3% (224/248 of coral spats were successfully identified into six genera, including Acropora, Isopora, Montipora, Pocillopora, Porites, and Pavona. PaxC further separated I. cuneata and I. palifera of Isopora from Acropora, and ORF successfully identified the species of Pocillopora (except P. meandrina and P. eydouxi. Moreover, other cnidarian species such as actinarians, zoanthids, and Millepora species were visually found using fluorescence and identified by COI DNA barcoding. This combination of existing approaches greatly improved the taxonomic resolution of early coral life stages, which to date has been mainly limited to the family level based on skeletal identification. Overall, this study suggests important improvements for the identification of coral recruits in ecological studies.

  3. Identification of scleractinian coral recruits using fluorescent censusing and DNA barcoding techniques.

    Science.gov (United States)

    Hsu, Chia-Min; de Palmas, Stéphane; Kuo, Chao-Yang; Denis, Vianney; Chen, Chaolun Allen

    2014-01-01

    The identification of coral recruits has been problematic due to a lack of definitive morphological characters being available for higher taxonomic resolution. In this study, we tested whether fluorescent detection of coral recruits used in combinations of different DNA-barcoding markers (cytochrome oxidase I gene [COI], open reading frame [ORF], and nuclear Pax-C intron [PaxC]) could be useful for increasing the resolution of coral spat identification in ecological studies. One hundred and fifty settlement plates were emplaced at nine sites on the fringing reefs of Kenting National Park in southern Taiwan between April 2011 and September 2012. A total of 248 living coral spats and juveniles (with basal areas ranging from 0.21 to 134.57 mm(2)) were detected on the plates with the aid of fluorescent light and collected for molecular analyses. Using the COI DNA barcoding technique, 90.3% (224/248) of coral spats were successfully identified into six genera, including Acropora, Isopora, Montipora, Pocillopora, Porites, and Pavona. PaxC further separated I. cuneata and I. palifera of Isopora from Acropora, and ORF successfully identified the species of Pocillopora (except P. meandrina and P. eydouxi). Moreover, other cnidarian species such as actinarians, zoanthids, and Millepora species were visually found using fluorescence and identified by COI DNA barcoding. This combination of existing approaches greatly improved the taxonomic resolution of early coral life stages, which to date has been mainly limited to the family level based on skeletal identification. Overall, this study suggests important improvements for the identification of coral recruits in ecological studies.

  4. Climate warming, marine protected areas and the ocean-scale integrity of coral reef ecosystems.

    Science.gov (United States)

    Graham, Nicholas A J; McClanahan, Tim R; MacNeil, M Aaron; Wilson, Shaun K; Polunin, Nicholas V C; Jennings, Simon; Chabanet, Pascale; Clark, Susan; Spalding, Mark D; Letourneur, Yves; Bigot, Lionel; Galzin, René; Ohman, Marcus C; Garpe, Kajsa C; Edwards, Alasdair J; Sheppard, Charles R C

    2008-08-27

    Coral reefs have emerged as one of the ecosystems most vulnerable to climate variation and change. While the contribution of a warming climate to the loss of live coral cover has been well documented across large spatial and temporal scales, the associated effects on fish have not. Here, we respond to recent and repeated calls to assess the importance of local management in conserving coral reefs in the context of global climate change. Such information is important, as coral reef fish assemblages are the most species dense vertebrate communities on earth, contributing critical ecosystem functions and providing crucial ecosystem services to human societies in tropical countries. Our assessment of the impacts of the 1998 mass bleaching event on coral cover, reef structural complexity, and reef associated fishes spans 7 countries, 66 sites and 26 degrees of latitude in the Indian Ocean. Using Bayesian meta-analysis we show that changes in the size structure, diversity and trophic composition of the reef fish community have followed coral declines. Although the ocean scale integrity of these coral reef ecosystems has been lost, it is positive to see the effects are spatially variable at multiple scales, with impacts and vulnerability affected by geography but not management regime. Existing no-take marine protected areas still support high biomass of fish, however they had no positive affect on the ecosystem response to large-scale disturbance. This suggests a need for future conservation and management efforts to identify and protect regional refugia, which should be integrated into existing management frameworks and combined with policies to improve system-wide resilience to climate variation and change.

  5. Large predatory coral trout species unlikely to meet increasing energetic demands in a warming ocean

    KAUST Repository

    Johansen, J.L.

    2015-09-08

    Increased ocean temperature due to climate change is raising metabolic demands and energy requirements of marine ectotherms. If productivity of marine systems and fisheries are to persist, individual species must compensate for this demand through increasing energy acquisition or decreasing energy expenditure. Here we reveal that the most important coral reef fishery species in the Indo-west Pacific, the large predatory coral trout Plectropomus leopardus (Serranidae), can behaviourally adjust food intake to maintain body-condition under elevated temperatures, and acclimate over time to consume larger meals. However, these increased energetic demands are unlikely to be met by adequate production at lower trophic levels, as smaller prey species are often the first to decline in response to climate-induced loss of live coral and structural complexity. Consequently, ubiquitous increases in energy consumption due to climate change will increase top-down competition for a dwindling biomass of prey, potentially distorting entire food webs and associated fisheries.

  6. Light-shade adaptation of Stylophora pistillata, a hermatypic coral from the Gulf of Eilat

    Energy Technology Data Exchange (ETDEWEB)

    Falkowski, P G [Brookhaven National Lab., Upton, NY; Dubinsky, Z

    1981-01-15

    All reef-forming, or hermatypic, corals harbor photosynthetic endosymbiotic algae called zooxanthellae. The zooxanthellae are essential for the well-being of their hosts; nevertheless, little is known about how light affects the symbiotic association, especially regarding the numbers of zooxanthellae, their photosynthetic responses, and their overall productivity. On the reefs of the Gulf of Eilat, Stylophora pistillata is an abundant hermatypic coral; it is unique in that region in that it can adapt to a wide range of light intensities. In the high light intensities of lagoons or the upper areas of reefs, the corals are markedly lighter in color than those living under ledges, in grottos, or near the reef floor. We report here on the biochemical and physiological adaptations of S. pistillata to variations in light intensity spanning more than two orders of magnitude.

  7. Large predatory coral trout species unlikely to meet increasing energetic demands in a warming ocean

    KAUST Repository

    Johansen, J.L.; Pratchett, M.S.; Messmer, V.; Coker, Darren James; Tobin, A.J.; Hoey, A.S.

    2015-01-01

    Increased ocean temperature due to climate change is raising metabolic demands and energy requirements of marine ectotherms. If productivity of marine systems and fisheries are to persist, individual species must compensate for this demand through increasing energy acquisition or decreasing energy expenditure. Here we reveal that the most important coral reef fishery species in the Indo-west Pacific, the large predatory coral trout Plectropomus leopardus (Serranidae), can behaviourally adjust food intake to maintain body-condition under elevated temperatures, and acclimate over time to consume larger meals. However, these increased energetic demands are unlikely to be met by adequate production at lower trophic levels, as smaller prey species are often the first to decline in response to climate-induced loss of live coral and structural complexity. Consequently, ubiquitous increases in energy consumption due to climate change will increase top-down competition for a dwindling biomass of prey, potentially distorting entire food webs and associated fisheries.

  8. Coral diseases and bleaching on Colombian Caribbean coral reefs

    Directory of Open Access Journals (Sweden)

    Raúl Navas-Camacho

    2010-05-01

    Full Text Available Since 1998 the National Monitoring System for the Coral Reefs of Colombia (SIMAC has monitored the occurrence of coral bleaching and diseases in some Colombian coral reefs (permanent stations at San Andres Island, Rosario Islands, Tayrona, San Bernardo Islands and Urabá. The main purpose is to evaluate their health status and to understand the factors that have been contributing to their decline. To estimate these occurrences, annual surveys in 126 permanent belt transects (10x2m with different depth intervals (3-6 meters, 9-12 meters and 15-18 meters are performed at all reef sites. Data from the 1998-2004 period, revealed that San Andrés Island had many colonies with diseases (38.9 colonies/m2, and Urabá had high numbers with bleaching (54.4 colonies/m2. Of the seven reported coral diseases studied, Dark Spots Disease (DSD, and White Plague Disease (WPD were noteworthy because they occurred in all Caribbean monitored sites, and because of their high interannual infection incidence. Thirty five species of scleractinian corals were affected by at least one disease and a high incidence of coral diseases on the main reef builders is documented. Bleaching was present in 34 species. During the whole monitoring period, Agaricia agaricites and Siderastrea siderea were the species most severely affected by DSD and bleaching, respectively. Diseases on species such as Agaricia fragilis, A.grahamae, A. humilis, Diploria clivosa, Eusmilia fastigiata, Millepora complanata, and Mycetophyllia aliciae are recorded for first time in Colombia. We present bleaching and disease incidences, kinds of diseases, coral species affected, reef localities studied, depth intervals of surveys, and temporal (years variation for each geographic area. This variation makes difficult to clearly determine defined patterns or general trends for monitored reefs. This is the first long-term study of coral diseases and bleaching in the Southwestern Caribbean, and one of the few

  9. Competitive interactions between corals and turf algae depend on coral colony form.

    Science.gov (United States)

    Swierts, Thomas; Vermeij, Mark Ja

    2016-01-01

    Turf algae are becoming more abundant on coral reefs worldwide, but their effects on other benthic organisms remain poorly described. To describe the general characteristics of competitive interactions between corals and turf algae, we determined the occurrence and outcomes of coral-turf algal interactions among different coral growth forms (branching, upright, massive, encrusting, plating, and solitary) on a shallow reef in Vietnam. In total, the amount of turf algal interaction, i.e., the proportion of the coral boundary directly bordering turf algae, was quantified for 1,276 coral colonies belonging to 27 genera and the putative outcome of each interaction was noted. The amount of turf algal interaction and the outcome of these interactions differed predictably among the six growth forms. Encrusting corals interacted most often with turf algae, but also competed most successfully against turf algae. The opposite was observed for branching corals, which rarely interacted with turf algae and rarely won these competitive interactions. Including all other growth forms, a positive relationship was found between the amount of competitive interactions with neighboring turf algae and the percentage of such interaction won by the coral. This growth form dependent ability to outcompete turf algae was not only observed among coral species, but also among different growth forms in morphologically plastic coral genera (Acropora, Favia, Favites, Montastrea, Montipora, Porites) illustrating the general nature of this relationship.

  10. Influence of coral cover and structural complexity on the accuracy of visual surveys of coral-reef fish communities

    KAUST Repository

    Coker, Darren James

    2017-04-20

    Using manipulated patch reefs with combinations of varying live-coral cover (low, medium and high) and structural complexity (low and high), common community metrics (abundance, diversity, richness and community composition) collected through standard underwater visual census techniques were compared with exhaustive collections using a fish anaesthetic (clove oil). This study showed that reef condition did not influence underwater visual census estimates at a community level, but reef condition can influence the detectability of some small and cryptic species and this may be exacerbated if surveys are conducted on a larger scale.

  11. Influence of coral cover and structural complexity on the accuracy of visual surveys of coral-reef fish communities

    KAUST Repository

    Coker, Darren James; Nowicki, J. P.; Graham, N. A. J.

    2017-01-01

    Using manipulated patch reefs with combinations of varying live-coral cover (low, medium and high) and structural complexity (low and high), common community metrics (abundance, diversity, richness and community composition) collected through standard underwater visual census techniques were compared with exhaustive collections using a fish anaesthetic (clove oil). This study showed that reef condition did not influence underwater visual census estimates at a community level, but reef condition can influence the detectability of some small and cryptic species and this may be exacerbated if surveys are conducted on a larger scale.

  12. Diversity and evolution of coral fluorescent proteins.

    Directory of Open Access Journals (Sweden)

    Naila O Alieva

    2008-07-01

    Full Text Available GFP-like fluorescent proteins (FPs are the key color determinants in reef-building corals (class Anthozoa, order Scleractinia and are of considerable interest as potential genetically encoded fluorescent labels. Here we report 40 additional members of the GFP family from corals. There are three major paralogous lineages of coral FPs. One of them is retained in all sampled coral families and is responsible for the non-fluorescent purple-blue color, while each of the other two evolved a full complement of typical coral fluorescent colors (cyan, green, and red and underwent sorting between coral groups. Among the newly cloned proteins are a "chromo-red" color type from Echinopora forskaliana (family Faviidae and pink chromoprotein from Stylophora pistillata (Pocilloporidae, both evolving independently from the rest of coral chromoproteins. There are several cyan FPs that possess a novel kind of excitation spectrum indicating a neutral chromophore ground state, for which the residue E167 is responsible (numeration according to GFP from A. victoria. The chromoprotein from Acropora millepora is an unusual blue instead of purple, which is due to two mutations: S64C and S183T. We applied a novel probabilistic sampling approach to recreate the common ancestor of all coral FPs as well as the more derived common ancestor of three main fluorescent colors of the Faviina suborder. Both proteins were green such as found elsewhere outside class Anthozoa. Interestingly, a substantial fraction of the all-coral ancestral protein had a chromohore apparently locked in a non-fluorescent neutral state, which may reflect the transitional stage that enabled rapid color diversification early in the history of coral FPs. Our results highlight the extent of convergent or parallel evolution of the color diversity in corals, provide the foundation for experimental studies of evolutionary processes that led to color diversification, and enable a comparative analysis of

  13. Phosphate deficiency promotes coral bleaching and is reflected by the ultrastructure of symbiotic dinoflagellates.

    Science.gov (United States)

    Rosset, Sabrina; Wiedenmann, Jörg; Reed, Adam J; D'Angelo, Cecilia

    2017-05-15

    Enrichment of reef environments with dissolved inorganic nutrients is considered a major threat to the survival of corals living in symbiosis with dinoflagellates (Symbiodinium sp.). We argue, however, that the direct negative effects on the symbiosis are not necessarily caused by the nutrient enrichment itself but by the phosphorus starvation of the algal symbionts that can be caused by skewed nitrogen (N) to phosphorus (P) ratios. We exposed corals to imbalanced N:P ratios in long-term experiments and found that the undersupply of phosphate severely disturbed the symbiosis, indicated by the loss of coral biomass, malfunctioning of algal photosynthesis and bleaching of the corals. In contrast, the corals tolerated an undersupply with nitrogen at high phosphate concentrations without negative effects on symbiont photosynthesis, suggesting a better adaptation to nitrogen limitation. Transmission electron microscopy analysis revealed that the signatures of ultrastructural biomarkers represent versatile tools for the classification of nutrient stress in symbiotic algae. Notably, high N:P ratios in the water were clearly identified by the accumulation of uric acid crystals. Copyright © 2017 The Authors. Published by Elsevier Ltd.. All rights reserved.

  14. The origin and evolution of coral species richness in a marine biodiversity hotspot.

    Science.gov (United States)

    Huang, Danwei; Goldberg, Emma E; Chou, Loke Ming; Roy, Kaustuv

    2018-02-01

    The Coral Triangle (CT) region of the Indo-Pacific realm harbors an extraordinary number of species, with richness decreasing away from this biodiversity hotspot. Despite multiple competing hypotheses, the dynamics underlying this regional diversity pattern remain poorly understood. Here, we use a time-calibrated evolutionary tree of living reef coral species, their current geographic ranges, and model-based estimates of regional rates of speciation, extinction, and geographic range shifts to show that origination rates within the CT are lower than in surrounding regions, a result inconsistent with the long-standing center of origin hypothesis. Furthermore, endemism of coral species in the CT is low, and the CT endemics are older than relatives found outside this region. Overall, our model results suggest that the high diversity of reef corals in the CT is largely due to range expansions into this region of species that evolved elsewhere. These findings strongly support the notion that geographic range shifts play a critical role in generating species diversity gradients. They also show that preserving the processes that gave rise to the striking diversity of corals in the CT requires protecting not just reefs within the hotspot, but also those in the surrounding areas. © 2017 The Author(s). Evolution © 2017 The Society for the Study of Evolution.

  15. Coral skeletons provide historical evidence of phosphorus runoff on the great barrier reef.

    Directory of Open Access Journals (Sweden)

    Jennie Mallela

    Full Text Available Recently, the inshore reefs of the Great Barrier Reef have declined rapidly because of deteriorating water quality. Increased catchment runoff is one potential culprit. The impacts of land-use on coral growth and reef health however are largely circumstantial due to limited long-term data on water quality and reef health. Here we use a 60 year coral core record to show that phosphorus contained in the skeletons (P/Ca of long-lived, near-shore Porites corals on the Great Barrier Reef correlates with annual records of fertiliser application and particulate phosphorus loads in the adjacent catchment. Skeletal P/Ca also correlates with Ba/Ca, a proxy for fluvial sediment loading, again linking near-shore phosphorus records with river runoff. Coral core records suggest that phosphorus levels increased 8 fold between 1949 and 2008 with the greatest levels coinciding with periods of high fertiliser-phosphorus use. Periods of high P/Ca correspond with intense agricultural activity and increased fertiliser application in the river catchment following agricultural expansion and replanting after cyclone damage. Our results demonstrate how coral P/Ca records can be used to assess terrestrial nutrient loading of vulnerable near-shore reefs.

  16. Mass coral mortality under local amplification of 2 °C ocean warming

    Science.gov (United States)

    Decarlo, Thomas M.; Cohen, Anne L.; Wong, George T. F.; Davis, Kristen A.; Lohmann, Pat; Soong, Keryea

    2017-03-01

    A 2 °C increase in global temperature above pre-industrial levels is considered a reasonable target for avoiding the most devastating impacts of anthropogenic climate change. In June 2015, sea surface temperature (SST) of the South China Sea (SCS) increased by 2 °C in response to the developing Pacific El Niño. On its own, this moderate, short-lived warming was unlikely to cause widespread damage to coral reefs in the region, and the coral reef “Bleaching Alert” alarm was not raised. However, on Dongsha Atoll, in the northern SCS, unusually weak winds created low-flow conditions that amplified the 2 °C basin-scale anomaly. Water temperatures on the reef flat, normally indistinguishable from open-ocean SST, exceeded 6 °C above normal summertime levels. Mass coral bleaching quickly ensued, killing 40% of the resident coral community in an event unprecedented in at least the past 40 years. Our findings highlight the risks of 2 °C ocean warming to coral reef ecosystems when global and local processes align to drive intense heating, with devastating consequences.

  17. Revisiting the Cassandra syndrome; the changing climate of coral reef research

    Science.gov (United States)

    Maynard, J. A.; Baird, A. H.; Pratchett, M. S.

    2008-12-01

    Climate change will be with us for decades, even with significant reductions in emissions. Therefore, predictions made with respect to climate change impacts on coral reefs need to be highly defensible to ensure credibility over the timeframes this issue demands. If not, a Cassandra syndrome could be created whereby future more well-supported predictions of the fate of reefs are neither heard nor acted upon. Herein, popularising predictions based on essentially untested assumptions regarding reefs and their capacity to cope with future climate change is questioned. Some of these assumptions include that: all corals live close to their thermal limits, corals cannot adapt/acclimatize to rapid rates of change, physiological trade-offs resulting from ocean acidification will lead to reduced fecundity, and that climate-induced coral loss leads to widespread fisheries collapse. We argue that, while there is a place for popularising worst-case scenarios, the coral reef crisis has been effectively communicated and, though this communication should be sustained, efforts should now focus on addressing critical knowledge gaps.

  18. Non-Random Variability in Functional Composition of Coral Reef Fish Communities along an Environmental Gradient.

    Science.gov (United States)

    Plass-Johnson, Jeremiah G; Taylor, Marc H; Husain, Aidah A A; Teichberg, Mirta C; Ferse, Sebastian C A

    2016-01-01

    Changes in the coral reef complex can affect predator-prey relationships, resource availability and niche utilisation in the associated fish community, which may be reflected in decreased stability of the functional traits present in a community. This is because particular traits may be favoured by a changing environment, or by habitat degradation. Furthermore, other traits can be selected against because degradation can relax the association between fishes and benthic habitat. We characterised six important ecological traits for fish species occurring at seven sites across a disturbed coral reef archipelago in Indonesia, where reefs have been exposed to eutrophication and destructive fishing practices for decades. Functional diversity was assessed using two complementary indices (FRic and RaoQ) and correlated to important environmental factors (live coral cover and rugosity, representing local reef health, and distance from shore, representing a cross-shelf environmental gradient). Indices were examined for both a change in their mean, as well as temporal (short-term; hours) and spatial (cross-shelf) variability, to assess whether fish-habitat association became relaxed along with habitat degradation. Furthermore, variability in individual traits was examined to identify the traits that are most affected by habitat change. Increases in the general reef health indicators, live coral cover and rugosity (correlated with distance from the mainland), were associated with decreases in the variability of functional diversity and with community-level changes in the abundance of several traits (notably home range size, maximum length, microalgae, detritus and small invertebrate feeding and reproductive turnover). A decrease in coral cover increased variability of RaoQ while rugosity and distance both inversely affected variability of FRic; however, averages for these indices did not reveal patterns associated with the environment. These results suggest that increased

  19. Physiological and isotopic responses of scleractinian corals to ocean acidification

    Science.gov (United States)

    Krief, Shani; Hendy, Erica J.; Fine, Maoz; Yam, Ruth; Meibom, Anders; Foster, Gavin L.; Shemesh, Aldo

    2010-09-01

    Uptake of anthropogenic CO 2 by the oceans is altering seawater chemistry with potentially serious consequences for coral reef ecosystems due to the reduction of seawater pH and aragonite saturation state ( Ωarag). The objectives of this long-term study were to investigate the viability of two ecologically important reef-building coral species, massive Porites sp. and Stylophora pistillata, exposed to high pCO 2 (or low pH) conditions and to observe possible changes in physiologically related parameters as well as skeletal isotopic composition. Fragments of Porites sp. and S. pistillata were kept for 6-14 months under controlled aquarium conditions characterized by normal and elevated pCO 2 conditions, corresponding to pH T values of 8.09, 7.49, and 7.19, respectively. In contrast with shorter, and therefore more transient experiments, the long experimental timescale achieved in this study ensures complete equilibration and steady state with the experimental environment and guarantees that the data provide insights into viable and stably growing corals. During the experiments, all coral fragments survived and added new skeleton, even at seawater Ωarag zooxanthellae, along with physiological data (such as skeletal growth, tissue biomass, zooxanthellae cell density, and chlorophyll concentration) allow for a direct comparison with corals living under normal conditions and sampled simultaneously. Skeletal growth and zooxanthellae density were found to decrease, whereas coral tissue biomass (measured as protein concentration) and zooxanthellae chlorophyll concentrations increased under high pCO 2 (low pH) conditions. Both species showed similar trends of δ 11B depletion and δ 18O enrichment under reduced pH, whereas the δ 13C results imply species-specific metabolic response to high pCO 2 conditions. The skeletal δ 11B values plot above seawater δ 11B vs. pH borate fractionation curves calculated using either the theoretically derived α B value of 1

  20. Microbial disease and the coral holobiont

    Science.gov (United States)

    Bourne, David G.; Garren, Melissa; Work, Thierry M.; Rosenberg, Eugene; Smith, Garriet W.; Harvell, C. Drew

    2009-01-01

    Tropical coral reefs harbour a reservoir of enormous biodiversity that is increasingly threatened by direct human activities and indirect global climate shifts. Emerging coral diseases are one serious threat implicated in extensive reef deterioration through disruption of the integrity of the coral holobiont – a complex symbiosis between the coral animal, endobiotic alga and an array of microorganisms. In this article, we review our current understanding of the role of microorganisms in coral health and disease, and highlight the pressing interdisciplinary research priorities required to elucidate the mechanisms of disease. We advocate an approach that applies knowledge gained from experiences in human and veterinary medicine, integrated into multidisciplinary studies that investigate the interactions between host, agent and environment of a given coral disease. These approaches include robust and precise disease diagnosis, standardised ecological methods and application of rapidly developing DNA, RNA and protein technologies, alongside established histological, microbial ecology and ecological expertise. Such approaches will allow a better understanding of the causes of coral mortality and coral reef declines and help assess potential management options to mitigate their effects in the longer term.

  1. The Stylasterine coral Allopora stellulata (Stewart)

    NARCIS (Netherlands)

    Boschma, H.

    1960-01-01

    The description of Stylaster stellulatus Stewart was based on a specimen obtained at Tahiti, the coral was stated to be extremely rare, and only found at one small island in the neighbourhood. The description contains all the peculiarities for a specific definition of the coral, the salient points

  2. Coral larvae move toward reef sounds

    NARCIS (Netherlands)

    Vermeij, M.J.A.; Marhaver, K.L.; Huijbers, C.M.; Nagelkerken, I.; Simpson, S.D.

    2010-01-01

    Free-swimming larvae of tropical corals go through a critical life-phase when they return from the open ocean to select a suitable settlement substrate. During the planktonic phase of their life cycle, the behaviours of small coral larvae (<1 mm) that influence settlement success are difficult to

  3. The mushroom coral as a habitat

    NARCIS (Netherlands)

    Hoeksema, B.W.; Meij, van der S.E.T.; Fransen, C.H.J.M.

    2012-01-01

    The evolution of symbiotic relationships involving reef corals has had much impact on tropical marine biodiversity. Because of their endosymbiotic algae (zooxanthellae) corals can grow fast in tropical shallow seas where they form reefs that supply food, substrate and shelter for other organisms.

  4. Coral aquaculture: applying scientific knowledge to ex situ production

    NARCIS (Netherlands)

    Leal, M.C.; Ferrier-Pagès, C.; Petersen, D.; Osinga, R.

    2016-01-01

    Coral aquaculture is an activity of growing interest due to the degradation of coral reefs worldwide and concomitant growing demand for corals by three industries: marine ornamental trade, pharmaceutical industry and reef restoration. Although captive breeding and propagation of corals is a

  5. 75 FR 48934 - Coral Reef Conservation Program Implementation Guidelines

    Science.gov (United States)

    2010-08-12

    ...-01] RIN 0648-ZC19 Coral Reef Conservation Program Implementation Guidelines AGENCY: National Oceanic... Guidelines (Guidelines) for the Coral Reef Conservation Program (CRCP or Program) under the Coral Reef... assistance for coral reef conservation projects under the Act. NOAA revised the Implementation Guidelines for...

  6. Climate-driven coral reorganisation influences aggressive behaviour in juvenile coral-reef fishes

    Science.gov (United States)

    Kok, Judith E.; Graham, Nicholas A. J.; Hoogenboom, Mia O.

    2016-06-01

    Globally, habitat degradation is altering the abundance and diversity of species in a variety of ecosystems. This study aimed to determine how habitat degradation, in terms of changing coral composition under climate change, affected abundance, species richness and aggressive behaviour of juveniles of three damselfishes ( Pomacentrus moluccensis, P. amboinensis and Dischistodus perspicillatus, in order of decreasing reliance on coral). Patch reefs were constructed to simulate two types of reefs: present-day reefs that are vulnerable to climate-induced coral bleaching, and reefs with more bleaching-robust coral taxa, thereby simulating the likely future of coral reefs under a warming climate. Fish communities were allowed to establish naturally on the reefs during the summer recruitment period. Climate-robust reefs had lower total species richness of coral-reef fishes than climate-vulnerable reefs, but total fish abundance was not significantly different between reef types (pooled across all species and life-history stages). The nature of aggressive interactions, measured as the number of aggressive chases, varied according to coral composition; on climate-robust reefs, juveniles used the substratum less often to avoid aggression from competitors, and interspecific aggression became relatively more frequent than intraspecific aggression for juveniles of the coral-obligate P. moluccensis. This study highlights the importance of coral composition as a determinant of behaviour and diversity of coral-reef fishes.

  7. Mid-term coral-algal dynamics and conservation status of a Gorgona Island (Tropical Eastern Pacific coral reef

    Directory of Open Access Journals (Sweden)

    Fernando A Zapata

    2010-05-01

    Full Text Available Colombian coral reefs, as other reefs worldwide, have deteriorated significantly during the last few decades due to both natural and anthropogenic disturbances. The National Monitoring System for Coral Reefs in Colombia (SIMAC was established in 1998 to provide long-term data bases to assess the changes of Colombian coral reefs against perturbations and to identify the factors responsible for their decline or recovery. On the Pacific coast, data on coral and algal cover have been collected yearly during seven consecutive years (1998-2004 from 20 permanent transects in two sites at La Azufrada reef, Gorgona Island. Overall, coral cover was high (55.1%-65.7% and algal cover low (28.8%-37.5% and both exhibited significant changes among years, most notably on shallow areas. Differences between sites in both coral and algal cover were present since the study began and may be explained by differences in sedimentation stress derived from soil runoff. Differences between depths most likely stem from the effects of low tidal sub-aerial exposures. Particularly intense sub-aerial exposures occurred repeatedly during January-March, 2001 and accounted for a decrease in coral and an increase in algal cover on shallow depths observed later that year. Additionally, the shallow area on the Northern site seems to be negatively affected by the combined effect of sedimentation and low tidal exposure. However, a decrease in coral cover and an increase of algal cover since 2001 on deep areas at both sites remain unexplained. Comparisons with previous studies suggest that the reef at La Azufrada has been more resilient than other reefs in the Tropical Eastern Pacific (TEP, recovering pre-disturbance (1979 levels of coral cover within a 10 year period after the 1982-83 El Niño, which caused 85% mortality. Furthermore, the effects of the 1997-98 El Niño, indicated by the difference in overall live coral cover between 1998 and 1999, were minor (A través del Sistema

  8. Big Data Approaches To Coral-Microbe Symbiosis

    Science.gov (United States)

    Zaneveld, J.; Pollock, F. J.; McMinds, R.; Smith, S.; Payet, J.; Hanna, B.; Welsh, R.; Foster, A.; Ohdera, A.; Shantz, A. A.; Burkepile, D. E.; Maynard, J. A.; Medina, M.; Vega Thurber, R.

    2016-02-01

    Coral reefs face increasing challenges worldwide, threatened by overfishing and nutrient pollution, which drive growth of algal competitors of corals, and periods of extreme temperature, which drive mass coral bleaching. I will discuss two projects that examine how coral's complex relationships with microorganisms affect the response of coral colonies and coral species to environmental challenge. Microbiological studies have documented key roles for coral's microbial symbionts in energy harvest and defense against pathogens. However, the evolutionary history of corals and their microbes is little studied. As part of the Global Coral Microbiome Project, we are characterizing bacterial, archaeal, fungal, and Symbiodinium diversity across >1400 DNA samples from all major groups of corals, collected from 15 locations worldwide. This collection will allow us to ask how coral- microbe associations evolved over evolutionary time, and to determine whether microbial symbiosis helps predict the relative vulnerability of certain coral species to environmental stress. In the second project, we experimentally characterized how the long-term effects of human impacts such as overfishing and nutrient pollution influence coral-microbe symbiosis. We conducted a three-year field experiment in the Florida Keys applying nutrient pollution or simulated overfishing to reef plots, and traced the effects on reef communities, coral microbiomes, and coral health. The results show that extremes of temperature and algal competition destabilize coral microbiomes, increasing pathogen blooms, coral disease, and coral death. Surprisingly, these local stressors interacted strongly with thermal stress: the greatest microbiome disruption, and >80% of coral mortality happened in the hottest periods. Thus, overfishing and nutrient pollution may interact with increased climate-driven episodes of sub-bleaching thermal stress to increase coral mortality by disrupt reef communities down to microbial scales.

  9. Carbon translocation from symbiont to host depends on irradiance and food availability in the tropical coral Stylophora pistillata

    Science.gov (United States)

    Tremblay, P.; Grover, R.; Maguer, J. F.; Hoogenboom, M.; Ferrier-Pagès, C.

    2014-03-01

    Reef-building corals live in symbiosis with dinoflagellates that translocate a large proportion of their photosynthetically fixed carbon compounds to their coral host for its own metabolism. The carbon budget and translocation rate, however, vary depending on environmental conditions, coral host species, and symbiont clade. To quantify variability in carbon translocation in response to environmental conditions, this study assessed the effect of two different irradiance levels (120 and 250 μmol photons m-2 s-1) and feeding regimes (fed with Artemia salina nauplii and unfed) on the carbon budget of the tropical coral Stylophora pistillata. For this purpose, H13CO3 --enriched seawater was used to trace the conversion of photosynthetic carbon into symbiont and coral biomass and excrete particulate organic carbon. Results showed that carbon translocation (ca. 78 %) and utilization were similar under both irradiance levels for unfed colonies. In contrast, carbon utilization by fed colonies was dependent on the growth irradiance. Under low irradiance, heterotrophy was accompanied by lower carbon translocation (71 %), higher host and symbiont biomass, and higher calcification rates. Under high irradiance, heterotrophy was accompanied by higher rates of photosynthesis, respiration, and carbon translocation (90 %) as well as higher host biomass. Hence, levels of resource sharing within coral-dinoflagellate symbioses depend critically on environmental conditions.

  10. Current status of coral reefs in the United Arab Emirates: Distribution, extent, and community structure with implications for management.

    Science.gov (United States)

    Grizzle, Raymond E; Ward, Krystin M; AlShihi, Rashid M S; Burt, John A

    2016-04-30

    Coral reefs of the United Arab Emirates were once extensive, but have declined dramatically in recent decades. Marine management and policy have been hampered by outdated and inaccurate habitat maps and habitat quality information. We combined existing recent datasets with our newly mapped coral habitats to provide a current assessment of nation-wide extent, and performed quantitative surveys of communities at 23 sites to assess coral cover and composition. Over 132 km(2) of coral habitat was mapped, averaging 28.6 ± 3.8% live coral cover at surveyed sites. In the Arabian Gulf low cover, low richness Porites dominated communities characterized western Abu Dhabi, while reefs northeast of Abu Dhabi city generally contained higher richness and cover, and were dominated by merulinids (formerly faviids). Distinct communities occur in the Sea of Oman, where cover and richness were low. We provide management recommendations to enhance conservation of vulnerable coral reefs in the UAE. Copyright © 2015 Elsevier Ltd. All rights reserved.

  11. Prevalence of potential nitrogen-fixing, green sulphur bacteria in the skeleton of reef-building coral Isopora palifera

    Science.gov (United States)

    Yang, S. H.

    2016-02-01

    Microbial endoliths, which inhabit interior pores of rocks, skeletons and coral, are ubiquitous in terrestrial and marine environments. In the present study, various colored layers stratified the endolithic environment within the skeleton of Isopora palifera; however, there was a distinct green-pigmented layer in the skeleton (beneath the living coral tissue). To characterize diversity of endolithic microorganisms, 16S ribosomal RNA gene amplicon pyrosequencing was used to investigate bacterial communities in the green layer of Isopora palifera coral colonies retrieved fromGreen Island, Taiwan. The dominant bacterial group in the green layer belonged to the bacterial phylum Chlorobi, green sulphur bacteria capable of anoxygenic photosynthesis and nitrogen fixation. Specifically, bacteria of the genus Prosthecochloris were dominant in this green layer. To our knowledge, this is the first study to provide a detailed profile of endolithic bacteria in coral and to determine prevalence of Prosthecochloris in the green layer. Based on our findings, we infer that these bacteria may have an important functional role in the coral holobiont in the nutrient-limited coral reef ecosystem.

  12. Conditions of Decapods Infraorders in Dead Coral Pocillopora sp. at Pemuteran, Bali: Study Case 2011 and 2016

    Science.gov (United States)

    Kholilah, Nenik; Malik, Muhammad Danie Al; Kurniasih, Eka Maya; Sembiring, Andrianus; Ambariyanto, Ambariyanto; Mayer, Christopher

    2018-02-01

    Decapods are marine organism which have burrowing-life characteristic and tend to live in the hard coral, such as Pocillopora sp. Pemuteran district is located in West Bali with high marine biodiversity. In 2016 almost all of the coral reefs in this area have bleached. This research investigates the condition of decapods before and after coral bleaching in Pemuteran. Dead corals, Pocillopora sp., were taken from 8-12 meters depth in 2016. All organisms within those corals were collected and identified until infraorder and family level. Comparison was done with data collected in 2011. This study found 12 families with a total of 5 infraorder which are equal to the previous data. The number of individual has increased from 88 into 214 individual. The mean presence increased from 6.2875 ind/fam to 15.2875 ind/fam. While the density also increased from 23.68 ind/L to 42.09 ind/L. Uniformity and dominance indices for all infraorder is low. These results show that there is an increase of the density of decapods after coral bleaching event, but the diversity of decapods was slightly changed.

  13. The Biological Nature of Geochemical Proxies: algal symbionts affect coral skeletal chemistry

    Science.gov (United States)

    Owens, K.; Cohen, A. L.; Shimizu, N.

    2001-12-01

    The strontium-calcium ratio (Sr/Ca) of reef coral skeleton is an important ocean temperature proxy that has been used to address some particularly controversial climate change issues. However, the paleothermometer has sometimes proven unreliable and there are indications that the temperature-dependence of Sr/Ca in coral aragonite is linked to the photosynthetic activity of algal symbionts (zooxanthellae) in coral tissue. We examined the effect of algal symbiosis on skeletal chemistry using Astrangia danae, a small colonial temperate scleractinian that occurs naturally with and without zooxanthellae. Live symbiotic (deep brown) and asymbiotic (white) colonies of similar size were collected in Woods Hole where water temperatures fluctuate seasonally between -2oC and 23oC. We used a microbeam technique (Secondary Ion Mass Spectrometry) and a 30 micron diameter sampling beam to construct high-resolution Sr/Ca profiles, 2500 microns long, down the growth axes of the outer calical (thecal) walls. Profiles generated from co-occuring symbiotic and asymbiotic colonies are remarkably different despite their exposure to identical water temperatures. Symbiotic coral Sr/Ca displays four large-amplitude annual cycles with high values in the winter, low values in the summer and a temperature dependence similar to that of tropical reef corals. By comparison, Sr/Ca profiles constructed from asymbiotic coral skeleton display little variability over the same time period. Asymbiont Sr/Ca is relatively insensitive to the enormous temperature changes experienced over the year; the temperature dependence is similar to that of nighttime skeletal deposits in tropical reef corals and non-biological aragonite precipitates. We propose that the large variations in skeletal Sr/Ca observed in all symbiont-hosting coral species are not related to SST variability per se but are driven primarily by large seasonal variations in skeletal calcification rate associated with symbiont photosynthesis. Our

  14. Symbiont shuffling linked to differential photochemical dynamics of Symbiodinium in three Caribbean reef corals

    Science.gov (United States)

    Cunning, Ross; Silverstein, Rachel N.; Baker, Andrew C.

    2018-03-01

    Dynamic symbioses with functionally diverse dinoflagellate algae in the genus Symbiodinium may allow some reef corals to alter their phenotypes through `symbiont shuffling', or changes in symbiont community composition. In particular, corals may become more bleaching resistant by increasing the relative abundance of thermally tolerant Symbiodinium in clade D after bleaching. Despite the immediate relevance of this phenomenon to corals living in warming oceans—and to interventions aimed at boosting coral resilience—the mechanisms governing how, why, and when symbiont shuffling occurs are still poorly understood. Here, we performed controlled thermal bleaching and recovery experiments on three species of Caribbean corals hosting mixtures of D1a ( S. trenchii) and other symbionts in clades B or C. We show that the degree of symbiont shuffling is related to (1) the duration of stress exposure and (2) the difference in photochemical efficiency ( F v /F m) of co-occurring symbionts under stress (i.e., the `photochemical advantage' of one symbiont over the other). The advantage of D1a under stress was greatest in Montastraea cavernosa, intermediate in Siderastrea siderea, and lowest in Orbicella faveolata and correlated positively with the magnitude of shuffling toward D1a. In holobionts where D1a had less of an advantage over co-occurring symbionts (i.e., only slightly higher F v /F m under stress), a longer stress duration was required to elicit commensurate increases in D1a abundance. In fact, across these three coral species, 92.9% of variation in the degree of symbiont shuffling could be explained by the time-integrated photochemical advantage of D1a under heat stress. Although F v /F m is governed by numerous factors that this study is unable to resolve mechanistically, its strong empirical relationship with symbiont shuffling helps elucidate general features that govern this process in reef corals, which will help refine predictions of coral responses to

  15. A 350 Year Cloud Cover Reconstruction Deduced from Caribbean Coral Proxies

    Science.gov (United States)

    Winter, Amos; Sammarco, Paul; Mikolajewicz, Uwe; Jury, Mark; Zanchettin, Davide

    2015-04-01

    Clouds are a major factor contributing to climate change with respect to a variety of effects on the earth's climates, primarily radiative effects, amelioration of heating, and regional changes in precipitation patterns. There have been very few studies of decadal and longer term changes in cloud cover in the tropics and sub-tropics, both over land and the ocean. In the tropics, there is great uncertainty regarding how global warming will affect cloud cover. Observational satellite data is so short that it is difficult to discern any temporal trends. The skeletons of scleractinian corals are considered to contain among the best records of high-resolution (sub-annual) environmental variability in the tropical and sub-tropical oceans. Corals generally live in well-mixed coastal regions and can often record environmental conditions of large areas of the upper ocean. This is particularly the case at low latitudes. Scleractinian corals are sessile, epibenthic fauna, and the type of environmental information recorded at the location where the coral has been living is dependent upon the species of coral considered and proxy index of interest. Zooxanthellate hermatypic corals in tropical and sub-tropical seas precipitate CaCO3 skeletons as they grow. This growth is made possible through the manufacture of CaCO3 crystals, facilitated by the zooxanthellae. During the process of crystallization, the holobiont binds carbon of different isotopes into the crystals. Stable carbon isotope concentrations vary with a variety of environmental conditions. In the Caribbean, δ13C in corals of the species Montastraea faveolata can be used as a proxy for changes in cloud cover. In this contribution, we will demonstrate that the stable isotope 13C varies concomitantly with cloud cover and present a new reconstruction of cloud cover over the Caribbean Sea that extends back to the year 1760. We will show that there is good agreement between the main features of our coral proxy record of

  16. Ocean acidification effects on calcification in Caribbean scleractinian coral exposed to elevated pCO2: a potential for acclimation

    Science.gov (United States)

    Hankins, C.

    2016-02-01

    Ocean acidification (OA) is projected to increase the acidity of coral reef habitats 2-3 times that of present day pCO2 levels. Many studies have shown the adverse effects on scleractinian calcification when exposed to elevated pCO2 levels, however, no such effects were seen in this study whereby corals were exposed for three months to elevated pCO2 levels. In this study, all corals were kept in culture for one year prior to being used in experimental trials. Data from culture systems shows coral experience a range of pCO2 from 300-600 µatm over the course of a day. This range is attributed to respiration and photosynthesis which also naturally occurs in a reef habitat. Montastrea cavernosa, Orbicella faveolata, and Pseudodiploria clivosa were exposed to their ambient culture conditions (control) or to elevated pCO2 levels of 1000 µatm (IPCC A1F1 scenario). By combining photographic analysis of live tissue area or exposed skeleton with the buoyant weight technique, an area density of each coral fragment was obtained to infer rates of calcification or erosion of skeleton. After three months of experimental exposure, preliminary results suggest that there is no significant difference in calcification or erosion in any of the species tested. Acclimation in the elevated pCO2 culture environment may have conditioned the coral to better withstand high pCO2 levels. Long acclimation periods of coral to near term future pCO2 levels may more accurately predict calcification responses in corals of the future.

  17. Dual temperature effects on oxygen isotopic ratio of shallow-water coral skeleton: Consequences on seasonal and interannual records

    Science.gov (United States)

    Juillet-Leclerc, A.; Reynaud, S.

    2009-04-01

    Oxygen isotopic ratio from coral skeleton is regarded for a long time as promising climate archives at seasonal scale. Although in isotopic disequilibrium relative to seawater, it is supposed to obey to the isotope thermometer. Indeed, coral oxygen isotopic records are strongly temperature dependent, but d18O-temperature calibrations derived from different corals are highly variable. The isotope thermometer assumption does not take into account vital effects due to biogenic origin of the mineral. Corals are animals living in symbiosis with algae (zooxanthellae). Interactions between symbiont photosynthesis and coral skeleton carbonation have been abundantly observed but they remain poorly understood and the effects of photosynthesis on coral growth and skeleton oxygen ratio are ignored. Coral cultured under two light conditions enabled to relate metabolic parameters and oxygen isotopic variability with photosynthetic activity. By examining responses provided by each colony they revealed that photosynthesis significantly affected d18O, by an opposite sense compared with the sole temperature influence. Since temperature and light changes are associated during seasonal variations, this complicates the interpretation of seasonal record. Additionally, this complexity is amplified because photosynthetic activity is also directly impacted by temperature variability. Thus, the annual isotopic amplitude due to the "physical" temperature influence is partly compensated through photosynthesis. Similar opposite effect is also shown by extension rate of the cultured colonies. First, we will examine and quantify consequences of photosynthesis on growth rate and oxygen isotopic signature, from cultured corals. Second, we will consider the consequences of this vital effect on data series, at seasonal and interannual time scales.

  18. Coral Reefs and People in a High-CO2 World: Where Can Science Make a Difference to People?

    Science.gov (United States)

    Langdon, Chris; Ekstrom, Julia A.; Cooley, Sarah R.; Suatoni, Lisa; Beck, Michael W.; Brander, Luke M.; Burke, Lauretta; Cinner, Josh E.; Doherty, Carolyn; Edwards, Peter E. T.; Gledhill, Dwight; Jiang, Li-Qing; van Hooidonk, Ruben J.; Teh, Louise; Waldbusser, George G.; Ritter, Jessica

    2016-01-01

    Reefs and People at Risk Increasing levels of carbon dioxide in the atmosphere put shallow, warm-water coral reef ecosystems, and the people who depend upon them at risk from two key global environmental stresses: 1) elevated sea surface temperature (that can cause coral bleaching and related mortality), and 2) ocean acidification. These global stressors: cannot be avoided by local management, compound local stressors, and hasten the loss of ecosystem services. Impacts to people will be most grave where a) human dependence on coral reef ecosystems is high, b) sea surface temperature reaches critical levels soonest, and c) ocean acidification levels are most severe. Where these elements align, swift action will be needed to protect people’s lives and livelihoods, but such action must be informed by data and science. An Indicator Approach Designing policies to offset potential harm to coral reef ecosystems and people requires a better understanding of where CO2-related global environmental stresses could cause the most severe impacts. Mapping indicators has been proposed as a way of combining natural and social science data to identify policy actions even when the needed science is relatively nascent. To identify where people are at risk and where more science is needed, we map indicators of biological, physical and social science factors to understand how human dependence on coral reef ecosystems will be affected by globally-driven threats to corals expected in a high-CO2 world. Western Mexico, Micronesia, Indonesia and parts of Australia have high human dependence and will likely face severe combined threats. As a region, Southeast Asia is particularly at risk. Many of the countries most dependent upon coral reef ecosystems are places for which we have the least robust data on ocean acidification. These areas require new data and interdisciplinary scientific research to help coral reef-dependent human communities better prepare for a high CO2 world. PMID:27828972

  19. Coral Reefs and People in a High-CO2 World: Where Can Science Make a Difference to People?

    Science.gov (United States)

    Pendleton, Linwood; Comte, Adrien; Langdon, Chris; Ekstrom, Julia A; Cooley, Sarah R; Suatoni, Lisa; Beck, Michael W; Brander, Luke M; Burke, Lauretta; Cinner, Josh E; Doherty, Carolyn; Edwards, Peter E T; Gledhill, Dwight; Jiang, Li-Qing; van Hooidonk, Ruben J; Teh, Louise; Waldbusser, George G; Ritter, Jessica

    2016-01-01

    Increasing levels of carbon dioxide in the atmosphere put shallow, warm-water coral reef ecosystems, and the people who depend upon them at risk from two key global environmental stresses: 1) elevated sea surface temperature (that can cause coral bleaching and related mortality), and 2) ocean acidification. These global stressors: cannot be avoided by local management, compound local stressors, and hasten the loss of ecosystem services. Impacts to people will be most grave where a) human dependence on coral reef ecosystems is high, b) sea surface temperature reaches critical levels soonest, and c) ocean acidification levels are most severe. Where these elements align, swift action will be needed to protect people's lives and livelihoods, but such action must be informed by data and science. Designing policies to offset potential harm to coral reef ecosystems and people requires a better understanding of where CO2-related global environmental stresses could cause the most severe impacts. Mapping indicators has been proposed as a way of combining natural and social science data to identify policy actions even when the needed science is relatively nascent. To identify where people are at risk and where more science is needed, we map indicators of biological, physical and social science factors to understand how human dependence on coral reef ecosystems will be affected by globally-driven threats to corals expected in a high-CO2 world. Western Mexico, Micronesia, Indonesia and parts of Australia have high human dependence and will likely face severe combined threats. As a region, Southeast Asia is particularly at risk. Many of the countries most dependent upon coral reef ecosystems are places for which we have the least robust data on ocean acidification. These areas require new data and interdisciplinary scientific research to help coral reef-dependent human communities better prepare for a high CO2 world.

  20. Coral Reefs and People in a High-CO2 World: Where Can Science Make a Difference to People?

    Directory of Open Access Journals (Sweden)

    Linwood Pendleton

    Full Text Available Increasing levels of carbon dioxide in the atmosphere put shallow, warm-water coral reef ecosystems, and the people who depend upon them at risk from two key global environmental stresses: 1 elevated sea surface temperature (that can cause coral bleaching and related mortality, and 2 ocean acidification. These global stressors: cannot be avoided by local management, compound local stressors, and hasten the loss of ecosystem services. Impacts to people will be most grave where a human dependence on coral reef ecosystems is high, b sea surface temperature reaches critical levels soonest, and c ocean acidification levels are most severe. Where these elements align, swift action will be needed to protect people's lives and livelihoods, but such action must be informed by data and science.Designing policies to offset potential harm to coral reef ecosystems and people requires a better understanding of where CO2-related global environmental stresses could cause the most severe impacts. Mapping indicators has been proposed as a way of combining natural and social science data to identify policy actions even when the needed science is relatively nascent. To identify where people are at risk and where more science is needed, we map indicators of biological, physical and social science factors to understand how human dependence on coral reef ecosystems will be affected by globally-driven threats to corals expected in a high-CO2 world. Western Mexico, Micronesia, Indonesia and parts of Australia have high human dependence and will likely face severe combined threats. As a region, Southeast Asia is particularly at risk. Many of the countries most dependent upon coral reef ecosystems are places for which we have the least robust data on ocean acidification. These areas require new data and interdisciplinary scientific research to help coral reef-dependent human communities better prepare for a high CO2 world.

  1. Partial mortality in massive reef corals as an indicator of sediment stress on coral reefs

    International Nuclear Information System (INIS)

    Nugues, Maggy M.; Roberts, Callum M.

    2003-01-01

    Partial mortality and fission on colonies of four common massive coral species were examined at sites differing in their exposure to river sediments in St. Lucia, West Indies. Rates of partial mortality were higher close to the river mouths, where more sediments were deposited, than away from the rivers in two coral species. Frequency of fission showed no significant trend. The percent change in coral cover on reefs from 1995 to 1998 was negatively related to the rate of partial mortality estimated in 1998 in all species. This suggests that partial mortality rates could reflect longer-term temporal changes in coral communities. Similar conclusions could also be reached using a less precise measure and simply recording partial mortality on colonies as <50% and ≥50% dead tissue. We conclude that partial mortality in some species of massive reef corals, expressed as the amount of dead tissue per colony, could provide a rapid and effective means of detecting sediment stress on coral reefs

  2. Metagenomic and ecophysiological analysis of biofilms colonizing coral substrates: "Life after death of coral"

    Science.gov (United States)

    Sanchez, A., Sr.; Cerqueda-Garcia, D.; Falcón, L. I.; Iglesias-Prieto, R., Sr.

    2015-12-01

    Coral reefs are the most productive ecosystems on the planet and are the most important carbonated structures of biological origin. However, global warming is affecting the health and functionality of these ecosystems. Specifically, most of the Acropora sp. stony corals have declined their population all over the Mexican Caribbean in more than ~80% of their original coverage, resulting in vast extensions of dead coral rubble. When the coral dies, the skeleton begins to be colonized by algae, sponges, bacteria and others, forming a highly diverse biofilm. We analyzed the metagenomes of the dead A. palmata rubbles from Puerto Morelos, in the Mexican Caribbean. Also, we quantified the elemental composition of biomass and measured nitrogen fixation and emission of greenhouse gases over 24 hrs. This works provides information on how the community is composed and functions after the death of the coral, visualizing a possible picture for a world without coral reefs.

  3. Partial mortality in massive reef corals as an indicator of sediment stress on coral reefs

    Energy Technology Data Exchange (ETDEWEB)

    Nugues, Maggy M.; Roberts, Callum M

    2003-03-01

    Partial mortality and fission on colonies of four common massive coral species were examined at sites differing in their exposure to river sediments in St. Lucia, West Indies. Rates of partial mortality were higher close to the river mouths, where more sediments were deposited, than away from the rivers in two coral species. Frequency of fission showed no significant trend. The percent change in coral cover on reefs from 1995 to 1998 was negatively related to the rate of partial mortality estimated in 1998 in all species. This suggests that partial mortality rates could reflect longer-term temporal changes in coral communities. Similar conclusions could also be reached using a less precise measure and simply recording partial mortality on colonies as <50% and {>=}50% dead tissue. We conclude that partial mortality in some species of massive reef corals, expressed as the amount of dead tissue per colony, could provide a rapid and effective means of detecting sediment stress on coral reefs.

  4. Stable mucus-associated bacterial communities in bleached and healthy corals of Porites lobata from the Arabian Seas

    KAUST Repository

    Hadaidi, Ghaida Ali Hassan; Rö thig, Till; Yum, Lauren; Ziegler, Maren; Arif, Chatchanit; Roder, Cornelia; Burt, John; Voolstra, Christian R.

    2017-01-01

    Coral reefs are subject to coral bleaching manifested by the loss of endosymbiotic algae from coral host tissue. Besides algae, corals associate with bacteria. In particular, bacteria residing in the surface mucus layer are thought to mediate coral

  5. Arnfried Antonius, coral diseases, and the AMLC

    Directory of Open Access Journals (Sweden)

    Laurie L. Richardson

    2012-03-01

    Full Text Available The study of coral diseases, coral pathogens, and the effects of diseases on tropical and subtropical coral reefs are all current, high-profile research areas. This interest has grown steadily since the first report of a coral disease in 1973. The author of this report was Arnfried Antonius and the publication was an abstract in the proceedings of a scientific meeting of the Association of Marine Laboratories of the Caribbean, or AMLC (then known as the Association of Island Marine Laboratories of the Caribbean. Since Antonius’ pioneering communication he continued working on coral diseases on reefs throughout the world, often documenting the first observation of a novel pathology in a novel location. Each of the coral diseases Antonius first described, in particular black band disease, is the subject of current and ongoing investigations addressing pathogens, etiology, and their effects on coral reefs. Many of the points and observations he made in his early papers are highly relevant to research today. This paper reviews aspects of Antonius’ early work, highlighting contributions he made that include the first in situ experimental studies aimed at discerning coral epizootiology and the first quantitative assessments of the role of environmental factors in coral disease. Antonius’ early findings are discussed in terms of relevant current controversies in this research areaEl estudio de las enfermedades de los corales, los patogenos de los corales y los efectos de estas enfermedades sobre los arrecifes tropicales y subtropicales son actualmente areas importantes de investigacion. El interés en este tema ha crecido continuamente desde el primer informe sobre una enfermedad de coral que se publico en 1973. El autor de este informe fue Arnfried Antonius y la publicacion fue un resumen en el Libro de Programa y Resumenes de la Decima Reunion de la Asociacion de Laboratorios Marinos Islenos del Caribe (conocida ahora como la Asociacion de

  6. Reef corals bleach to resist stress.

    Science.gov (United States)

    Obura, David O

    2009-02-01

    A rationale is presented here for a primary role of bleaching in regulation of the coral-zooxanthellae symbiosis under conditions of stress. Corals and zooxanthellae have fundamentally different metabolic rates, requiring active homeostasis to limit zooxanthellae production and manage translocated products to maintain the symbiosis. The control processes for homeostasis are compromised by environmental stress, resulting in metabolic imbalance between the symbionts. For the coral-zooxanthella symbiosis the most direct way to minimize metabolic imbalance under stress is to reduce photosynthetic production by zooxanthellae. Two mechanisms have been demonstrated that do this: reduction of the chlorophyll concentration in individual zooxanthellae and reduction of the relative biomass of zooxanthellae. Both mechanisms result in visual whitening of the coral, termed bleaching. Arguments are presented here that bleaching provides the final control to minimize physiological damage from stress as an adversity response to metabolic imbalance. As such, bleaching meets the requirements of a stress response syndrome/general adaptive mechanism that is sensitive to internal states rather than external parameters. Variation in bleaching responses among holobionts reflects genotypic and phenotypic differentiation, allowing evolutionary change by natural selection. Thus, reef corals bleach to resist stress, and thereby have some capacity to adapt to and survive change. The extreme thermal anomalies causing mass coral bleaching worldwide lie outside the reaction norms for most coral-zooxanthellae holobionts, revealing the limitations of bleaching as a control mechanism.

  7. New directions in coral reef microbial ecology.

    Science.gov (United States)

    Garren, Melissa; Azam, Farooq

    2012-04-01

    Microbial processes largely control the health and resilience of coral reef ecosystems, and new technologies have led to an exciting wave of discovery regarding the mechanisms by which microbial communities support the functioning of these incredibly diverse and valuable systems. There are three questions at the forefront of discovery: What mechanisms underlie coral reef health and resilience? How do environmental and anthropogenic pressures affect ecosystem function? What is the ecology of microbial diseases of corals? The goal is to understand the functioning of coral reefs as integrated systems from microbes and molecules to regional and ocean-basin scale ecosystems to enable accurate predictions of resilience and responses to perturbations such as climate change and eutrophication. This review outlines recent discoveries regarding the microbial ecology of different microenvironments within coral ecosystems, and highlights research directions that take advantage of new technologies to build a quantitative and mechanistic understanding of how coral health is connected through microbial processes to its surrounding environment. The time is ripe for natural resource managers and microbial ecologists to work together to create an integrated understanding of coral reef functioning. In the context of long-term survival and conservation of reefs, the need for this work is immediate. © 2011 Society for Applied Microbiology and Blackwell Publishing Ltd.

  8. Cumulative Human Impacts on Coral Reefs: Assessing Risk and Management Implications for Brazilian Coral Reefs

    OpenAIRE

    Rafael A. Magris; Alana Grech; Robert L. Pressey

    2018-01-01

    Effective management of coral reefs requires strategies tailored to cope with cumulative disturbances from human activities. In Brazil, where coral reefs are a priority for conservation, intensifying threats from local and global stressors are of paramount concern to management agencies. Using a cumulative impact assessment approach, our goal was to inform management actions for coral reefs in Brazil by assessing their exposure to multiple stressors (fishing, land-based activities, coastal de...

  9. Effects of reduced water quality on coral reefs in and out of no-take marine reserves.

    Science.gov (United States)

    Wenger, Amelia S; Williamson, David H; da Silva, Eduardo T; Ceccarelli, Daniela M; Browne, Nicola K; Petus, Caroline; Devlin, Michelle J

    2016-02-01

    Near-shore marine environments are increasingly subjected to reduced water quality, and their ability to withstand it is critical to their persistence. The potential role marine reserves may play in mitigating the effects of reduced water quality has received little attention. We investigated the spatial and temporal variability in live coral and macro-algal cover and water quality during moderate and major flooding events of the Fitzroy River within the Keppel Bay region of the Great Barrier Reef Marine Park from 2007 to 2013. We used 7 years of remote sensing data on water quality and data from long-term monitoring of coral reefs to quantify exposure of coral reefs to flood plumes. We used a distance linear model to partition the contribution of abiotic and biotic factors, including zoning, as drivers of the observed changes in coral and macro-algae cover. Moderate flood plumes from 2007 to 2009 did not affect coral cover on reefs in the Keppel Islands, suggesting the reef has intrinsic resistance against short-term exposure to reduced water quality. However, from 2009 to 2013, live coral cover declined by ∼ 50% following several weeks of exposure to turbid, low salinity water from major flood plume events in 2011 and subsequent moderate events in 2012 and 2013. Although the flooding events in 2012 and 2013 were smaller than the flooding events between 2007 to 2009, the ability of the reefs to withstand these moderate floods was lost, as evidenced by a ∼ 20% decline in coral cover between 2011 to 2013. Although zoning (no-take reserve or fished) was identified a significant driver of coral cover, we recorded consistently lower coral cover on reserve reefs than on fished reefs throughout the study period and significantly lower cover in 2011. Our findings suggest that even reefs with an inherent resistance to reduced water quality are not able to withstand repeated disturbance events. The limitations of reserves in mitigating the effects of reduced water

  10. Element availability of bivalve with symbiotic zooxanthellae in coral sea area as studied by multielement profiling analysis

    Science.gov (United States)

    Itoh, A.; Kabe, N.

    2008-12-01

    In coral sea, a characteristic ecosystem is formed by many kinds of marine animals and plants, although seawater is uneutrophic. This may be explained by the fact that various chemical species with bioessentiality are effectively taken and used by lower animals and plants in coral sea area. A symbiotic relationship often found among different animals and plants in this area is considered to be working as one of such processes. However, the specific bioavailability of the elements for the marine animals and plants in coral reef area has not been studied from the viewpoints of trace and ultratrace elements. It is found by the present authors that bivalve with symbiotic zooxanthellae (Tridacna crocea) living on coral reef had relatively higher bio- accumulation factors for many bio-essential elements than other kinds of bivalves, although they live in the uneutrophic sea area. The present authors focused on Tridacna crocea as one of the symbiotic animals. Thus, in the present study, at first, multielement determination of major-to-ultratrace elements (about 20 elements) in each organ of Tridacna crocea with symbiotic zooxanthellae, were carried out by ICP-AES, ICP- MS, and CHN coder. At Second, the specific bioavailability of trace and ultratrace elements in Tridacna crocea was discussed on the multielement data for seawater, seaweeds, and other bivalves in coral sea area.

  11. The rate of 45Ca uptake by two corals species at waters of Burung island, Bangka-Belitung province

    International Nuclear Information System (INIS)

    Zulkifli Dahlan; Gusti Diansyah; T Zia Ulqodry; Ania Citraresmini

    2010-01-01

    Coral reefs transplantation is the most technique used for coral reefs rehabilitation, at the present. Recently the 45 Ca technique has been using for determining growth appearances in corals because of its ability to calculate the calcification process. For this reason, the study on the rate of 45 Ca uptake by natural corals Acropora Formosa and Acropora nobilis was carried out between June and December 2009 at the waters of Burung Island, Bangka-Belitung Province. The coral fragments of about 5 cm were harvested and put into a PVC container filled with 2 liters of fresh sea water, then incubated with 45 CaCl 2 solutions with an activity of 11.04 μCi/ml for 8 hour under fluorescent light. After the incubation, the “labeled” coral fragments were transplanted to where they have been taken from, and after such period will be re-harvested to determine their 45 Ca uptake content. The results showed that the 45 Ca technique was a reliable method to calculate the rate 45 Ca uptake by coral fragments, which were studied in different depths and time periods of light exposure. There was a significant difference in the 45 Ca uptake by the two different coral species. A. Formosa up took more 45 Ca than A. nobilis did. The highest 45 Ca uptake was shown by A. Formosa at 5 m. This was true for all the lengths of time to light exposure (1, 3, 5 and 7 hours). Different pattern of 45 Ca uptake showed by A. nobilisat 10 m depth, where it could be recognized that after a drop of 45 Ca the uptake increase continuously until the end of the light exposure (7 hours). The difference in 45 Ca uptake between the coral fragments is assumed to be influence by light and the algae species living symbiotically with the coral species that will further influence the CO 2 -fixation. This process will influence the calcification process, which is expressed in 45 Ca uptake. Further studies should be carried out to exactly gathered data of all the factors which could influence the calcification

  12. Massive bleaching of coral reefs induced by the 2010 ENSO, Puerto Cabello, Venezuela.

    Science.gov (United States)

    del Mónaco, Carlos; Haiek, Gerard; Narciso, Samuel; Galindo, Miguel

    2012-06-01

    El Niño Southern Oscillation (ENSO) has generated global coral massive bleaching. The aim of this work was to evaluate the massive bleaching of coral reefs in Puerto Cabello, Venezuela derived from ENSO 2010. We evaluated the bleaching of reefs at five localities both at three and five meter depth. The coral cover and densities of colonies were estimated. We recorded living coral cover, number and diameter of bleached and non-bleached colonies of each coral species. The colonies were classified according to the proportion of bleached area. Satellite images (Modis Scar) were analyzed for chlorophyll-a concentration and temperature in August, September, October and November from 2008-2010. Precipitation, wind speed and air temperature information was evaluated in meteorological data for 2009 and 2010. A total of 58.3% of colonies, belonging to 11 hexacoral species, were affected and the greatest responses were observed in Colpophyllia natans, Montastraea annularis and Montastraeafaveolata. The most affected localities were closer to the mainland and had a bleached proportion up to 62.73+/-36.55%, with the highest proportion of affected colonies, whereas the farthest locality showed 20.25+/-14.00% bleached and the smallest proportion. The salinity in situ varied between 30 and 33ppm and high levels of turbidity were observed. According to the satellite images, in 2010 the surface water temperature reached 31 degree C in August, September and October, and resulted higher than those registered in 2008 and 2009. Regionally, chlorophyll values were higher in 2010 than in 2008 and 2009. The meteorological data indicated that precipitation in November 2010 was three times higher than in November 2009. Massive coral bleaching occurred due to a three month period of high temperatures followed by one month of intense ENSO-associated precipitation. However, this latter factor was likely the trigger because of the bleaching gradient observed.

  13. Deep-sea coral record of human impact on watershed quality in the Mississippi River Basin

    Science.gov (United States)

    Prouty, Nancy G.; Roark, E. Brendan; Koenig, Alan E.; Demopoulos, Amanda W. J.; Batista, Fabian C.; Kocar, Benjamin D.; Selby, David; McCarthy, Matthew D.; Mienis, Furu

    2014-01-01

    One of the greatest drivers of historical nutrient and sediment transport into the Gulf of Mexico is the unprecedented scale and intensity of land use change in the Mississippi River Basin. These landscape changes are linked to enhanced fluxes of carbon and nitrogen pollution from the Mississippi River, and persistent eutrophication and hypoxia in the northern Gulf of Mexico. Increased terrestrial runoff is one hypothesis for recent enrichment in bulk nitrogen isotope (δ15N) values, a tracer for nutrient source, observed in a Gulf of Mexico deep-sea coral record. However, unambiguously linking anthropogenic land use change to whole scale shifts in downstream Gulf of Mexico biogeochemical cycles is difficult. Here we present a novel approach, coupling a new tracer of agro-industrialization to a multiproxy record of nutrient loading in long-lived deep-sea corals collected in the Gulf of Mexico. We found that coral bulk δ15N values are enriched over the last 150–200 years relative to the last millennia, and compound-specific amino acid δ15N data indicate a strong increase in baseline δ15N of nitrate as the primary cause. Coral rhenium (Re) values are also strongly elevated during this period, suggesting that 34% of Re is of anthropogenic origin, consistent with Re enrichment in major world rivers. However, there are no pre-anthropogenic measurements of Re to confirm this observation. For the first time, an unprecedented record of natural and anthropogenic Re variability is documented through coral Re records. Taken together, these novel proxies link upstream changes in water quality to impacts on the deep-sea coral ecosystem.

  14. Assessing Oil Spill Impacts to Cold-Water Corals of the Deep Gulf of Mexico

    Science.gov (United States)

    DeLeo, D. M.; Lengyel, S. D.; Cordes, E. E.

    2016-02-01

    The Deepwater Horizon (DWH) disaster and subsequent cleanup efforts resulted in the release of an unprecedented amount of oil and chemical dispersants in the deep waters of the Gulf of Mexico (GoM). Over the years, numerous detrimental effects have been documented including impacts to cold-water coral ecosystems. Assessing and quantifying these effects is crucial to understanding the long-term consequences to affected coral populations as well as their resilience. We conducted live exposure experiments to investigate the toxicity of oil and dispersants on two deep-sea corals, Callogorgia delta and Paramuricea type B3. For both species, the treatments containing dispersants had a more pronounced effect than oil treatments alone. In addition, RNA from unexposed and DWH spill-impacted Paramuricea biscaya was extracted and sequenced using Illumina technology. A de novo reference transcriptome was produced and used to explore stress-induced variations in gene expression. Current findings show overexpression of genes coding for Cytochrome p450 (CYP1A1), Tumor necrosis factor receptor-associated factors (TRAFs), Peroxidasin and additional genes involved in innate immunity and apoptotic pathways. CYP1A1 is involved in the metabolism of xenobiotics and has been previously used as a diagnostic tool for aquatic pollution. TRAFs are responsible for regulating pathways involved in immune and inflammatory responses and were likewise overexpressed in thermally stressed shallow-water corals. Ribosomal proteins were also significantly underexpressed. These genes among others found in our expression data serve as useful biomarker candidates for assessing and monitoring future spill impacts as resource extraction continues in the deep waters of the GoM. Our results also provide insights into the responses of deep-sea corals to toxin exposure, implications of applying dispersants to oil spills and a novel reference assembly for a relatively under-studied group of cold-water corals.

  15. Deep-sea coral record of human impact on watershed quality in the Mississippi River Basin

    Science.gov (United States)

    Prouty, N.; Roark, B.; Koenig, A.; Batista, F. C.; Kocar, B. D.; Selby, D. S.; Mccarthy, M. D.; Mienis, F.; Ross, S. W.; Demopoulos, A. W.

    2015-12-01

    One of the greatest drivers of historical nutrient and sediment transport into the Gulf of Mexico is the unprecedented scale and intensity of land use change in the Mississippi River Basin. These landscape changes are linked to enhanced fluxes of carbon and nitrogen pollution from the Mississippi River, and persistent eutrophication and hypoxia in the northern Gulf of Mexico. Increased terrestrial runoff is one hypothesis for recent enrichment in bulk nitrogen isotope (δ15N) values, a tracer for nutrient source, observed in a Gulf of Mexico deep-sea coral record. However, unambiguously linking anthropogenic land use change to whole scale shifts in downstream Gulf of Mexico biogeochemical cycles is difficult. Here we present a novel approach, coupling a new tracer of agro-industrialization to a multiproxy record of nutrient loading in long-lived deep-sea corals collected in the Gulf of Mexico. We found that coral bulk δ15N values are enriched over the last 150-200 years relative to the last millennia, and compound-specific amino acid δ15N data indicate a strong increase in baseline δ15N of nitrate as the primary cause. Coral rhenium (Re) values are also strongly elevated during this period, suggesting that 34% of Re is of anthropogenic origin, consistent with Re enrichment in major world rivers. However, there are no pre-anthropogenic measurements of Re to confirm this observation. For the first time, an unprecedented record of natural and anthropogenic Re variability is documented through coral Re records. Taken together, these novel proxies link upstream changes in water quality to impacts on the deep-sea coral ecosystem.

  16. Changes in biodiversity and functioning of reef fish assemblages following coral bleaching and coral loss

    KAUST Repository

    Pratchett, M.S.; Hoey, A.S.; Wilson, S.K.; Messmer, V.; Graham, N.A.J.

    2011-01-01

    Coral reef ecosystems are increasingly subject to severe, large-scale disturbances caused by climate change (e.g., coral bleaching) and other more direct anthropogenic impacts. Many of these disturbances cause coral loss and corresponding changes in habitat structure, which has further important effects on abundance and diversity of coral reef fishes. Declines in the abundance and diversity of coral reef fishes are of considerable concern, given the potential loss of ecosystem function. This study explored the effects of coral loss, recorded in studies conducted throughout the world, on the diversity of fishes and also on individual responses of fishes within different functional groups. Extensive (>60%) coral loss almost invariably led to declines in fish diversity. Moreover, most fishes declined in abundance following acute disturbances that caused >10% declines in local coral cover. Response diversity, which is considered critical in maintaining ecosystem function and promoting resilience, was very low for corallivores, but was much higher for herbivores, omnivores and carnivores. Sustained and ongoing climate change thus poses a significant threat to coral reef ecosystems and diversity hotspots are no less susceptible to projected changes in diversity and function.

  17. Corals like it waxed: paraffin-based antifouling technology enhances coral spat survival.

    Directory of Open Access Journals (Sweden)

    Jan Tebben

    Full Text Available The early post-settlement stage is the most sensitive during the life history of reef building corals. However, few studies have examined the factors that influence coral mortality during this period. Here, the impact of fouling on the survival of newly settled coral spat of Acropora millepora was investigated by manipulating the extent of fouling cover on settlement tiles using non-toxic, wax antifouling coatings. Survival of spat on coated tiles was double that on control tiles. Moreover, there was a significant negative correlation between percentage cover of fouling and spat survival across all tiles types, suggesting that fouling in direct proximity to settled corals has detrimental effects on early post-settlement survival. While previous studies have shown that increased fouling negatively affects coral larval settlement and health of juvenile and adult corals, to the best of our knowledge, this is the first study to show a direct relationship between fouling and early post-settlement survival for a broadcast spawning scleractinian coral. The negative effects of fouling on this sensitive life history stage may become more pronounced in the future as coastal eutrophication increases. Our results further suggest that targeted seeding of coral spat on artificial surfaces in combination with fouling control could prove useful to improve the efficiency of sexual reproduction-based coral propagation for reef rehabilitation.

  18. Changes in biodiversity and functioning of reef fish assemblages following coral bleaching and coral loss

    KAUST Repository

    Pratchett, M.S.

    2011-08-12

    Coral reef ecosystems are increasingly subject to severe, large-scale disturbances caused by climate change (e.g., coral bleaching) and other more direct anthropogenic impacts. Many of these disturbances cause coral loss and corresponding changes in habitat structure, which has further important effects on abundance and diversity of coral reef fishes. Declines in the abundance and diversity of coral reef fishes are of considerable concern, given the potential loss of ecosystem function. This study explored the effects of coral loss, recorded in studies conducted throughout the world, on the diversity of fishes and also on individual responses of fishes within different functional groups. Extensive (>60%) coral loss almost invariably led to declines in fish diversity. Moreover, most fishes declined in abundance following acute disturbances that caused >10% declines in local coral cover. Response diversity, which is considered critical in maintaining ecosystem function and promoting resilience, was very low for corallivores, but was much higher for herbivores, omnivores and carnivores. Sustained and ongoing climate change thus poses a significant threat to coral reef ecosystems and diversity hotspots are no less susceptible to projected changes in diversity and function.

  19. Prey selection of corallivorous muricids at Koh Tao (Gulf of Thailand) four years after a major coral bleaching event

    NARCIS (Netherlands)

    Moerland, M.S.; Scott, C.M.; Hoeksema, B.W.

    2016-01-01

    Corallivorous Drupella (Muricidae) snails at Koh Tao are reported to have extended their range of prey species following a major coral bleaching event in 2010. Populations of their preferred Acropora prey had locally diminished in both size and abundance, and the snails had introduced free-living

  20. A Coral Reef as an Analogical Model to Promote Collaborative Learning on Cultural & Ethnic Diversity in Science

    Science.gov (United States)

    Yost, Robert W.; Gonzalez, Edward L. F.

    2008-01-01

    Analogical reasoning is integral to everyday living. The diversity associated with a coral reef provides a familiar model for initiating discussions focusing on cultural diversity and gender of past and present scientists with non-western science endeavors. These concepts are strengthened through the use of scientific biographical and historical…

  1. Reprint of - Deep-sea coral and hardbottom habitats on the west Florida slope, eastern Gulf of Mexico

    Science.gov (United States)

    Ross, Steve W.; Rhode, Mike; Brooke, Sandra

    2017-09-01

    Until recently, benthic habitats dominated by deep-sea corals (DSC) appeared to be less extensive on the slope of the Gulf of Mexico (GOM) than in the northeast Atlantic Ocean or off the southeastern US. There are relatively few bioherms (i.e., coral-built mounds) in the northern GOM, and most DSCs are attached to existing hard substrata (e.g., authigenically formed carbonate). The primary structure-forming, DSC in the GOM is Lophelia pertusa, but structure is also provided by other living and dead scleractinians, antipatharians (black corals), octocorals (gorgonians, soft corals), hydrocorals and sponges, as well as abundant rocky substrata. The best development of DSCs in the GOM was previously documented within Viosca Knoll oil and gas lease blocks 826 and 862/906 (north-central GOM) and on the Campeche Bank (southern GOM in Mexican waters). This paper documents extensive deep reef ecosystems composed of DSC and rocky hard-bottom recently surveyed on the West Florida Slope (WFS, eastern GOM) during six research cruises (2008-2012). Using multibeam sonar, CTD casts, and video from underwater vehicles, we describe the physical and oceanographic characteristics of these deep reefs and provide size or area estimates of deep coral and hardground habitats. The multibeam sonar analyses revealed hundreds of mounds and ridges, some of which were subsequently surveyed using underwater vehicles. Mounds and ridges in <525 m depths were usually capped with living coral colonies, dominated by L. pertusa. An extensive rocky scarp, running roughly north-south for at least 229 km, supported lower abundances of scleractinian corals than the mounds and ridges, despite an abundance of settlement substrata. Areal comparisons suggested that the WFS may exceed other parts of the GOM slope in extent of living deep coral coverage and other deep-reef habitat (dead coral and rock). The complex WFS region warrants additional studies to better understand the influences of oceanography and

  2. Growth rate and age distribution of deep-sea black corals in the Gulf of Mexico

    Science.gov (United States)

    Prouty, N.G.; Roark, E.B.; Buster, N.A.; Ross, Steve W.

    2011-01-01

    Black corals (order Antipatharia) are important long-lived, habitat-forming, sessile, benthic suspension feeders that are found in all oceans and are usually found in water depths greater than 30 m. Deep-water black corals are some of the slowest-growing, longest-lived deep-sea corals known. Previous age dating of a limited number of black coral samples in the Gulf of Mexico focused on extrapolated ages and growth rates based on skeletal 210Pb dating. Our results greatly expand the age and growth rate data of black corals from the Gulf of Mexico. Radiocarbon analysis of the oldest Leiopathes sp. specimen from the upper De Soto Slope at 300 m water depth indicates that these animals have been growing continuously for at least the last 2 millennia, with growth rates ranging from 8 to 22 µm yr–1. Visual growth ring counts based on scanning electron microscopy images were in good agreement with the 14C-derived ages, suggestive of annual ring formation. The presence of bomb-derived 14C in the outermost samples confirms sinking particulate organic matter as the dominant carbon source and suggests a link between the deep-sea and surface ocean. There was a high degree of reproducibility found between multiple discs cut from the base of each specimen, as well as within duplicate subsamples. Robust 14C-derived chronologies and known surface ocean 14C reservoir age constraints in the Gulf of Mexico provided reliable calendar ages with future application to the development of proxy records.

  3. Baseline assessments for coral reef community structure and demographics on West Maui

    Science.gov (United States)

    Vargas-Angel, Bernardo; White, Darla; Storlazzi, Curt; Callender, Tova; Maurin, Paulo

    2017-01-01

    and “Synthesis and Discussion” sections of this report. The baseline assessments revealed that although some areas harbor prominent coral reef structures with high live coral cover and multispecies assemblages, others are characterized by sediment-impacted corals in impoverished and species-poor communities. Mean coral cover varied widely, from 49% at Wahikuli-shallow to 4.6% at Mahinahina-shallow. Similarly, coralline algal cover averaged 12.7% at Ka‘opala and Honokeana-north, but was altogether absent at the Mahinahina sites. Macroalgae was a minor component of the benthos across all study sites, representing only up to 2.3% at Mahinahina-south, while turf algae varied considerably, from 41% at Honokeana-north to 84% at the Honokahua site. Consequently, the Benthic Substrate Ratio (BSR) also varied considerably region wide, with the highest values (≥ 1), suggesting a healthier reef condition reported for the Wahikuli, Honokeana, and Honokōwai sites; and the lowest (≤ 0.5), suggesting impairment in structure and function, recorded at the Honolua and Honokahua sites. Adult colony densities were the highest at the Wahikuli (27 col/m2) but lowest at the Ka‘opala (7 col/m2 ) site. And, colony partial mortality peaked at the Ka‘opala (33%) and was the lowest at the Honokeana Bay (12%). Moreover, in-situ and derived estimates of water turbidity and sediment loading revealed that the Ka‘opala and Wahikuli stream sites ranked the highest for turbidity, whereas the Honokōwai and Ka‘opala sites ranked highest for sediment loading. Chronic and episodic terrestrial sediment stress has resulted in coral reef community demise, clearly illustrated at the Honolua, Honokahua, and Ka‘opala sites, where coral benthic cover and colony abundances ranked the lowest and levels of turf algae ranked among the highest. Left unattended, land-based pollution impacts will continue to negatively affect the coral reef communities of West Maui. And, under the current turbidity

  4. NOAA Photo Library - The Coral Kingdom

    Science.gov (United States)

    has only begun within the past 200 years. Charles Darwin, James Dwight Dana, and Louis Agassiz were photographs found here that will help you learn more about coral reefs in this album, visit the following

  5. MANGROVE-DERIVED NUTRIENTS AND CORAL REEFS

    Science.gov (United States)

    Understanding the consequences of the declining global cover of mangroves due to anthropogenic disturbance necessitates consideration of how mangrove-derived nutrients contribute to threatened coral reef systems. We sampled potential sources of organic matter and a suite of sessi...

  6. EOP Gold Coral (Gerardia sp.) Growth Measurements

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Gold coral (Gerardia sp.) trees that were inspected years earlier on Pisces submersible dives were revisited and their change in size measured. The fishery for...

  7. EPA Field Manual for Coral Reef Assessments

    Science.gov (United States)

    The Water Quality Research Program (WQRP) supports development of coral reef biological criteria. Research is focused on developing methods and tools to support implementation of legally defensible biological standards for maintaining biological integrity, which is protected by ...

  8. Marine metabolites: The sterols of soft coral

    Digital Repository Service at National Institute of Oceanography (India)

    Sarma, N.S.; Krishna, M.S.; Pasha, Sk.G.; Rao, T.S.P.; Venkateswarlu, Y.; Parameswaran, P.S.

    Sterols constitute a major group of secondary metabolites of soft corals. Several of these compounds have the 'usual' 3 beta-hydroxy, delta sup(5) (or delta sup(0)) cholestane skeleton, a large number of these metabolites are polar sterols...

  9. Ecosystem function and biodiversity on coral reefs

    OpenAIRE

    Ogden, J.; Done, T.; Salvat, B.

    1994-01-01

    The article highlights a workshop held in Key West, Florida in November 1993 attended by a group of 35 international scientists where topics of ecosystem function and biodiversity on coral reefs were discussed.

  10. New protection initiatives announced for coral reefs

    Science.gov (United States)

    Showstack, Randy

    Off the coasts of some of the South Pacific's most idyllic-sounding atolls, Austin Bowden-Kerby has seen first-hand the heavy damage to coral reefs from dynamite and cyanide fishing. For instance, while snorkeling near Chuuk, an island in Micronesia, he has observed craters and rubble beds of coral, which locals have told him date to World War II ordnance.A marine biologist and project scientist for the Coral Gardens Initiative of the Foundation for the Peoples of the South Pacific, Bowden-Kerby has also identified what he says are some public health effects related to destroyed coral reefs and their dying fisheries. These problems include protein and vitamin A deficiency and blindness, all of which may—in some instances—be linked to poor nutrition resulting from lower reef fish consumption by islanders, according to Bowden-Kerby.

  11. Lithifying Microbes Associated to Coral Rubbles

    Science.gov (United States)

    Beltran, Y.

    2015-12-01

    Microbial communities taking part in calcium carbonate lithification processes are particularly relevant to coral reef formation in as much as this lithification allows the stabilization of secondary reef structure. This second framework promotes long-term permanence of the reef, favoring the establishment of macro-reef builders, including corals. The reef-bacterial crusts formed by microbial communities are composed of magnesium calcite. Although prokaryotes are not proper calcifiers, carbonate precipitation can be induced by their metabolic activity and EPS production. Coral reefs are rapidly declining due to several variables associated to environmental change. Specifically in the Caribbean, stony coral Acropora palmata have suffered damage due to diseases, bleaching and storms. Some reports show that in highly disturbed areas wide ridges of reef rubbles are formed by biological and physical lithification. In this study we explore microbial diversity associated to lithified rubbles left after the great decline of reef-building A. palmata.

  12. Carbonate chemistry, water quality, coral measurements

    Data.gov (United States)

    U.S. Environmental Protection Agency — Carbonate chemistry parameters (pH, total alkalinity, and pCO2), water quality parameters (Temperature, salinity, Ca, Mg, PO4, NH3 and NO3) as well as all coral...

  13. Coral Reef Status of Navassa Island 2004

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Benthic and habitat data collected on the 2004 cruise to Navassa Islands National Wildlife Refuge. Parameters include benthic cover, coral disease prevalence,...

  14. Precious Coral Sales Report Data Set

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This is a federally mandated sales log which collects information on sales of raw coral, including weight and revenue. Also includes seller and buyer information....

  15. Coral photobiology: new light on old views.

    Science.gov (United States)

    Iluz, David; Dubinsky, Zvy

    2015-04-01

    The relationship between reef-building corals and light-harvesting pigments of zooxanthellae (Symbiodinium sp.) has been acknowledged for decades. The photosynthetic activity of the algal endocellular symbionts may provide up to 90% of the energy needed for the coral holobiont. This relationship limits the bathymetric distribution of coral reefs to the upper 100 m of tropical shorelines. However, even corals growing under high light intensities have to supplement the photosynthates translocated from the algae by predation on nutrient-rich zooplankton. New information has revealed how the fate of carbon acquired through photosynthesis differs from that secured by predation, whose rates are controlled by light-induced tentacular extension. The Goreau paradigm of "light-enhanced calcification" is being reevaluated, based on evidence that blue light stimulates coral calcification independently from photosynthesis rates. Furthermore, under dim light, calcification rates were stoichiometrically uncoupled from photosynthesis. The rates of photosynthesis of the zooxanthellae exhibit a clear endogenous rhythmicity maintained by light patterns. This daily pattern is concomitant with a periodicity of all the antioxidant protective mechanisms that wax and wane to meet the concomitant fluctuation in oxygen evolution. The phases of the moon are involved in the triggering of coral reproduction and control the spectacular annual mass-spawning events taking place in several reefs. The intensity and directionality of the underwater light field affect the architecture of coral colonies, leading to an optimization of the exposure of the zooxanthellae to light. We present a summary of major gaps in our understanding of the relationship between light and corals as a roadmap for future research. Copyright © 2014 Elsevier GmbH. All rights reserved.

  16. Hyperspectral Distinction of Two Caribbean Shallow-Water Corals Based on Their Pigments and Corresponding Reflectance

    Directory of Open Access Journals (Sweden)

    Juan L. Torres-Pérez

    2012-11-01

    Full Text Available The coloration of tropical reef corals is mainly due to their association with photosynthetic dinoflagellates commonly known as zooxanthellae. Combining High Performance Liquid Chromatography (HPLC, spectroscopy and derivative analysis we provide a novel approach to discriminate between the Caribbean shallow-water corals Acropora cervicornis and Porites porites based on their associated pigments. To the best of our knowledge, this is the first time that the total array of pigments found within the coral holobiont is reported. A total of 20 different pigments were identified including chlorophylls, carotenes and xanthophylls. Of these, eleven pigments were common to both species, eight were present only in A. cervicornis, and three were present only in P. porites. Given that these corals are living in similar physical conditions, we hypothesize that this pigment composition difference is likely a consequence of harboring different zooxanthellae clades with a possible influence of endolithic green or brown algae. We tested the effect of this difference in pigments on the reflectance spectra of both species. An important outcome was the correlation of total pigment concentration with coral reflectance spectra up to a 97% confidence level. Derivative analysis of the reflectance curves showed particular differences between species at wavelengths where several chlorophylls, carotenes and xanthophylls absorb. Within species variability of spectral features was not significant while interspecies variability was highly significant. We recognize that the detection of such differences with actual airborne or satellite remote sensors is extremely difficult. Nonetheless, based on our results, the combination of these techniques (HPLC, spectroscopy and derivative analysis can be used as a robust approach for the development of a site specific spectral library for the identification of shallow-water coral species. Studies (Torres-Pérez, NASA Postdoctoral

  17. Mass coral bleaching in the northern Persian Gulf, 2012

    Directory of Open Access Journals (Sweden)

    Javid Kavousi

    2014-09-01

    Full Text Available Coral bleaching events due to elevated temperatures are increasing in both frequency and magnitude worldwide. Mass bleaching was recorded at five sites in the northern Persian Gulf during August and September 2012. Based on available seawater temperature data from field, satellite and previous studies, we suggest that the coral bleaching threshold temperature in the northern Persian Gulf is between 33.5 and 34°C, which is about 1.5 to 2.5°C lower than that in the southern part. To assess the bleaching effects, coral genera counted during 60-minute dives were categorized into four groups including healthy, slightly bleached ( 50% bleached tissue and fully bleached colonies. The anomalously high sea surface temperature resulted in massive coral bleaching (~84% coral colonies affected. Acropora spp. colonies, which are known as the most vulnerable corals to thermal stress, were less affected by the bleaching than massive corals, such as Porites, which are among the most thermo-tolerant corals. Turbid waters, suggested as coral refugia against global warming, did not protect corals in this study since most affected corals were found in the most turbid waters. The 2012 bleaching in the northern Persian Gulf was relatively strong from the viewpoint of coral bleaching severity. Long-term monitoring is needed to understand the actual consequences of the bleaching event on the coral reefs and communities.

  18. Coral mucus fuels the sponge loop in warm- and cold-water coral reef ecosystems.

    Science.gov (United States)

    Rix, Laura; de Goeij, Jasper M; Mueller, Christina E; Struck, Ulrich; Middelburg, Jack J; van Duyl, Fleur C; Al-Horani, Fuad A; Wild, Christian; Naumann, Malik S; van Oevelen, Dick

    2016-01-07

    Shallow warm-water and deep-sea cold-water corals engineer the coral reef framework and fertilize reef communities by releasing coral mucus, a source of reef dissolved organic matter (DOM). By transforming DOM into particulate detritus, sponges play a key role in transferring the energy and nutrients in DOM to higher trophic levels on Caribbean reefs via the so-called sponge loop. Coral mucus may be a major DOM source for the sponge loop, but mucus uptake by sponges has not been demonstrated. Here we used laboratory stable isotope tracer experiments to show the transfer of coral mucus into the bulk tissue and phospholipid fatty acids of the warm-water sponge Mycale fistulifera and cold-water sponge Hymedesmia coriacea, demonstrating a direct trophic link between corals and reef sponges. Furthermore, 21-40% of the mucus carbon and 32-39% of the nitrogen assimilated by the sponges was subsequently released as detritus, confirming a sponge loop on Red Sea warm-water and north Atlantic cold-water coral reefs. The presence of a sponge loop in two vastly different reef environments suggests it is a ubiquitous feature of reef ecosystems contributing to the high biogeochemical cycling that may enable coral reefs to thrive in nutrient-limited (warm-water) and energy-limited (cold-water) environments.

  19. INDICATORS OF UV EXPOSURE IN CORALS AND THEIR RELEVANCE TO GLOBAL CLIMATE CHANGE AND CORAL BLEACHING

    Science.gov (United States)

    A compelling aspect of the deterioration of coral reefs is the phenomenon of coral bleaching. Through interactions with other factors such as sedimentation, pollution, and bacterial infection, bleaching can impact large areas of a reef with limited recovery, and it might be induc...

  20. RESISTANCE AND RESILIENCE TO CORAL BLEACHING: IMPLICATIONS FOR CORAL REEF CONSERVATION AND MANAGEMENT

    Science.gov (United States)

    The massive scale of the 1997–1998 El Nino–associated coral bleaching event underscores the need for strategies to mitigate biodiversity losses resulting from temperature-induced coral mortality. As baseline sea surface temperatures continue to rise, climate change may represent ...

  1. Coral-bacterial communities before and after a coral mass spawning event on Ningaloo Reef.

    Directory of Open Access Journals (Sweden)

    Janja Ceh

    Full Text Available Bacteria associated with three coral species, Acropora tenuis, Pocillopora damicornis and Tubastrea faulkneri, were assessed before and after coral mass spawning on Ningaloo Reef in Western Australia. Two colonies of each species were sampled before and after the mass spawning event and two additional samples were collected for P. damicornis after planulation. A variable 470 bp region of the 16 S rRNA gene was selected for pyrosequencing to provide an understanding of potential variations in coral-associated bacterial diversity and community structure. Bacterial diversity increased for all coral species after spawning as assessed by Chao1 diversity indicators. Minimal changes in community structure were observed at the class level and data at the taxonomical level of genus incorporated into a PCA analysis indicated that despite bacterial diversity increasing after spawning, coral-associated community structure did not shift greatly with samples grouped according to species. However, interesting changes could be detected from the dataset; for example, α-Proteobacteria increased in relative abundance after coral spawning and particularly the Roseobacter clade was found to be prominent in all coral species, indicating that this group may be important in coral reproduction.

  2. Identification and prevalence of coral diseases on three Western Indian Ocean coral reefs.

    Science.gov (United States)

    Séré, Mathieu G; Chabanet, Pascale; Turquet, Jean; Quod, Jean-Pascal; Schleyer, Michael H

    2015-06-03

    Coral diseases have caused a substantial decline in the biodiversity and abundance of reef-building corals. To date, more than 30 distinct diseases of scleractinian corals have been reported, which cause progressive tissue loss and/or affect coral growth, reproductive capacity, recruitment, species diversity and the abundance of reef-associated organisms. While coral disease research has increased over the last 4 decades, very little is known about coral diseases in the Western Indian Ocean. Surveys conducted at multiple sites in Reunion, South Africa and Mayotte between August 2010 and June 2012 revealed the presence of 6 main coral diseases: black band disease (BBD), white syndrome (WS), pink line syndrome (PLS), growth anomalies (GA), skeleton eroding band (SEB) and Porites white patch syndrome (PWPS). Overall, disease prevalence was higher in Reunion (7.5 ± 2.2%; mean ± SE) compared to South Africa (3.9 ± 0.8%) and Mayotte (2.7 ± 0.3%). Across locations, Acropora and Porites were the genera most susceptible to disease. Spatial variability was detected in both Reunion and South Africa, with BBD and WS more prevalent on shallow than deep reefs. There was also evidence of seasonality in 2 diseases: the prevalence of BBD and WS was higher in summer than winter. This was the first study to investigate the ecology of coral diseases, providing both qualitative and quantitative data, on Western Indian Ocean reefs, and surveys should be expanded to confirm these patterns.

  3. Metatranscriptome analysis of the reef-building coral Orbicella faveolata indicates holobiont response to coral disease

    KAUST Repository

    Daniels, Camille Arian

    2015-09-11

    White Plague Disease (WPD) is implicated in coral reef decline in the Caribbean and is characterized by microbial community shifts in coral mucus and tissue. Studies thus far have focused on assessing microbial communities or the identification of specific pathogens, yet few have addressed holobiont response across metaorganism compartments in coral disease. Here, we report on the first metatranscriptomic assessment of the coral host, algal symbiont, and microbial compartment in order to survey holobiont structure and function in healthy and diseased samples from Orbicella faveolata collected at reef sites off Puerto Rico. Our data indicate holobiont-wide as well as compartment-specific responses to WPD. Gene expression changes in the diseased coral host involved proteins playing a role in innate immunity, cytoskeletal integrity, cell adhesion, oxidative stress, chemical defense, and retroelements. In contrast, the algal symbiont showed comparatively few expression changes, but of large magnitude, of genes related to stress, photosynthesis, and metal transport. Concordant with the coral host response, the bacterial compartment showed increased abundance of heat shock proteins, genes related to oxidative stress, DNA repair, and potential retroelement activity. Importantly, analysis of the expressed bacterial gene functions establishes the participation of multiple bacterial families in WPD pathogenesis and also suggests a possible involvement of viruses and/or phages in structuring the bacterial assemblage. In this study, we implement an experimental approach to partition the coral holobiont and resolve compartment- and taxa-specific responses in order to understand metaorganism function in coral disease.

  4. Metatranscriptome analysis of the reef-buidling coral Orbicella faveolata indicates holobiont response to coral disease

    Directory of Open Access Journals (Sweden)

    Camille eDaniels

    2015-09-01

    Full Text Available White Plague Disease (WPD is implicated in coral reef decline in the Caribbean and is characterized by microbial community shifts in coral mucus and tissue. Studies thus far have focused on assessing microbial communities or the identification of specific pathogens, yet few have addressed holobiont response across metaorganism compartments in coral disease. Here, we report on the first metatranscriptomic assessment of the coral host, algal symbiont, and microbial compartment in order to survey holobiont structure and function in healthy and diseased samples from Orbicella faveolata collected at reef sites off Puerto Rico. Our data indicate metaorganism-wide as well as compartment-specific responses to WPD. Gene expression changes in the diseased coral host involved proteins playing a role in innate immunity, cytoskeletal integrity, cell adhesion, oxidative stress, chemical defense, and retroelements. In contrast, the algal symbiont showed comparatively few expression changes, but of large magnitude, of genes related to stress, photosynthesis, and metal transport. Concordant with the coral host response, the bacterial compartment showed increased abundance of heat shock proteins, genes related to oxidative stress, DNA repair, and potential retroelement activity. Importantly, analysis of the expressed bacterial gene functions establishes the participation of multiple bacterial families in WPD pathogenesis and also suggests a possible involvement of viruses and/or phages in structuring the bacterial assemblage. In this study, we implement an experimental approach to partition the coral holobiont and resolve compartment- and taxa-specific responses in order to understand metaorganism function in coral disease.

  5. Metatranscriptome analysis of the reef-building coral Orbicella faveolata indicates holobiont response to coral disease

    KAUST Repository

    Daniels, Camille Arian; Baumgarten, Sebastian; Yum, Lauren; Michell, Craig; Bayer, Till; Arif, Chatchanit; Roder, Cornelia; Weil, Ernesto; Voolstra, Christian R.

    2015-01-01

    White Plague Disease (WPD) is implicated in coral reef decline in the Caribbean and is characterized by microbial community shifts in coral mucus and tissue. Studies thus far have focused on assessing microbial communities or the identification of specific pathogens, yet few have addressed holobiont response across metaorganism compartments in coral disease. Here, we report on the first metatranscriptomic assessment of the coral host, algal symbiont, and microbial compartment in order to survey holobiont structure and function in healthy and diseased samples from Orbicella faveolata collected at reef sites off Puerto Rico. Our data indicate holobiont-wide as well as compartment-specific responses to WPD. Gene expression changes in the diseased coral host involved proteins playing a role in innate immunity, cytoskeletal integrity, cell adhesion, oxidative stress, chemical defense, and retroelements. In contrast, the algal symbiont showed comparatively few expression changes, but of large magnitude, of genes related to stress, photosynthesis, and metal transport. Concordant with the coral host response, the bacterial compartment showed increased abundance of heat shock proteins, genes related to oxidative stress, DNA repair, and potential retroelement activity. Importantly, analysis of the expressed bacterial gene functions establishes the participation of multiple bacterial families in WPD pathogenesis and also suggests a possible involvement of viruses and/or phages in structuring the bacterial assemblage. In this study, we implement an experimental approach to partition the coral holobiont and resolve compartment- and taxa-specific responses in order to understand metaorganism function in coral disease.

  6. Clypeotheca, a new skeletal structure in scleractinian corals: a potential stress indicator

    Science.gov (United States)

    Nothdurft, L. D.; Webb, G. E.

    2009-03-01

    Physiological responses to environmental stress are increasingly well studied in scleractinian corals. This work reports a new stress-related skeletal structure we term clypeotheca. Clypeotheca was observed in several live-collected common reef-building coral genera and a two to three kya subfossil specimen from Heron Reef, Great Barrier Reef and consists of an epitheca-like skeletal wall that seals over the surface of parts of the corallum in areas of stress or damage. It appears to form from a coordinated process wherein neighboring polyps and adjoining coenosarc seal themselves off from the surrounding environment as they contract and die. Clypeotheca forms from inward skeletal centripetal growth at the edges of corallites and by the merging of flange-like outgrowths that surround individual spines over the surface of the coenosteum. Microstructurally, the merged flanges are similar to upside-down dissepiments and true epitheca. Clypeotheca is interpreted primarily as a response to stress that may help protect the colony from invasion of unhealthy tissues by parasites or disease by retracting tissues in areas that have become unhealthy for the polyps. Identification of skeletal responses of corals to environmental stress may enable the frequency of certain types of environmental stress to be documented in past environments. Such data may be important for understanding the nature of reef dynamics through intervals of climate change and for monitoring the effects of possible anthropogenic stress in modern coral reef habitats.

  7. Adaptation of cyanobacteria to the sulfide-rich microenvironment of black band disease of coral.

    Science.gov (United States)

    Myers, Jamie L; Richardson, Laurie L

    2009-02-01

    Black band disease (BBD) is a cyanobacteria-dominated microbial mat that migrates across living coral colonies lysing coral tissue and leaving behind exposed coral skeleton. The mat is sulfide-rich due to the presence of sulfate-reducing bacteria, integral members of the BBD microbial community, and the sulfide they produce is lethal to corals. The effect of sulfide, normally toxic to cyanobacteria, on the photosynthetic capabilities of five BBD cyanobacterial isolates of the genera Geitlerinema (3), Leptolyngbya (1), and Oscillatoria (1) and six non-BBD cyanobacteria of the genera Leptolyngbya (3), Pseudanabaena (2), and Phormidium (1) was examined. Photosynthetic experiments were performed by measuring the photoincorporation of [(14)C] NaHCO(3) under the following conditions: (1) aerobic (no sulfide), (2) anaerobic with 0.5 mM sulfide, and (3) anaerobic with 0.5 mM sulfide and 10 microM 3-(3',4'-dichlorophenyl)-1,1-dimethylurea (DCMU). All five BBD cyanobacterial isolates tolerated sulfide by conducting sulfide-resistant oxygenic photosynthesis. Five of the non-BBD cyanobacterial isolates did not tolerate sulfide, although one Pseudanabaena isolate continued to photosynthesize in the presence of sulfide at a considerably reduced rate. None of the isolates conducted anoxygenic photosynthesis with sulfide as an electron donor. This is the first report on the physiology of a culture of Oscillatoria sp. found globally in BBD.

  8. Re-shifting the ecological baseline for the overexploited Mediterranean red coral.

    Science.gov (United States)

    Garrabou, J; Sala, E; Linares, C; Ledoux, J B; Montero-Serra, I; Dominici, J M; Kipson, S; Teixidó, N; Cebrian, E; Kersting, D K; Harmelin, J G

    2017-02-15

    Overexploitation leads to the ecological extinction of many oceanic species. The depletion of historical abundances of large animals, such as whales and sea turtles, is well known. However, the magnitude of the historical overfishing of exploited invertebrates is unclear. The lack of rigorous baseline data limits the implementation of efficient management and conservation plans in the marine realm. The precious Mediterranean red coral Corallium rubrum has been intensively exploited since antiquity for its use in jewellery. It shows dramatic signs of overexploitation, with no untouched populations known in shallow waters. Here, we report the discovery of an exceptional red coral population from a previously unexplored shallow underwater cave in Corsica (France) harbouring the largest biomass (by more than 100-fold) reported to date in the Mediterranean. Our findings challenge current assumptions on the pristine state of this emblematic species. Our results suggest that, before intense exploitation, red coral lived in relatively high-density populations with a large proportion of centuries-old colonies, even at very shallow depths. We call for the re-evaluation of the baseline for red coral and question the sustainability of the exploitation of a species that is still common but ecologically (functionally) extinct and in a trajectory of further decline.

  9. Modeling Surface Water Transport in the Central Pacific Ocean With 129I Records From Coral Skeletons

    Science.gov (United States)

    Beck, W.; Biddulph, D. L.; Russell, J. L.; Burr, G. S.; Jull, T. J.; Correge, T.; Roeder, B.

    2008-12-01

    129I occurs naturally in extremely low abundance via cosmic ray interactions in the atmosphere as well as by spontaneous fission of uranium. Oceanic concentrations of 129I have risen by several orders of magnitude during the last half century largely from environmental pollution coming from several point-source nuclear fuel reprocessing plants. In the Pacific basin, much of the increase has apparently come from the Hanford Nuclear reprocessing plant in the United States, with iodine primarily arriving via the Columbia River. Coral skeletons preserve records of 129I concentration of the surface waters from which they were deposited, yielding records with annual resolution or better. We will present three such records from different locations in the Pacific Ocean: the Solomon Islands, Easter Island and Clipperton Atoll. For this study, drill cores from living massive coral skeletons of the species Porites Lobata were collected from these sites. 129I/127I values were measured using accelerator mass spectrometry (AMS) at the University of Arizona with an NEC 3 MV Pelletron accelerator. Results from the analysis of the corals will be compared to the distribution of other mixed-layer tracers (chloro-fluorocarbons and tritium) collected during the World Ocean Circulation Experiment cruises conducted between 1990 and 2002. The 129I/127I records observed in these corals will also be compared to tracer transit time calculations determined from a 20th century simulation of the GFDL coupled-climate passive-tracer model.

  10. How accessible are coral reefs to people? A global assessment based on travel time.

    Science.gov (United States)

    Maire, Eva; Cinner, Joshua; Velez, Laure; Huchery, Cindy; Mora, Camilo; Dagata, Stephanie; Vigliola, Laurent; Wantiez, Laurent; Kulbicki, Michel; Mouillot, David

    2016-04-01

    The depletion of natural resources has become a major issue in many parts of the world, with the most accessible resources being most at risk. In the terrestrial realm, resource depletion has classically been related to accessibility through road networks. In contrast, in the marine realm, the impact on living resources is often framed into the Malthusian theory of human density around ecosystems. Here, we develop a new framework to estimate the accessibility of global coral reefs using potential travel time from the nearest human settlement or market. We show that 58% of coral reefs are located travel time from the market is a strong predictor of fish biomass on coral reefs. We also highlight a relative deficit of protection on coral reef areas near people, with disproportional protection on reefs far from people. This suggests that conservation efforts are targeting low-conflict reefs or places that may already be receiving de facto protection due to their isolation. Our global assessment of accessibility in the marine realm is a critical step to better understand the interplay between humans and resources. © 2016 John Wiley & Sons Ltd/CNRS.

  11. Arrecifes de Coral: Una Coleccion de Actividades en Espanol para Estudiantes de Escuela Intermedia (Coral Reefs: A Spanish Compilation of Activities for Middle School Students).

    Science.gov (United States)

    Walker, Sharon H.; Newton, R. Amanda; Ortiz, Alida

    This activity book for middle school students on coral reefs is divided into 10 sections. Section 1 is the introduction. Section 2 describes what coral reefs are while section 3 describes how coral reefs reproduce and grow. Section 4 describes where coral reefs are found, and section 5 describes life on a coral reef. Section 6 describes the…

  12. Variation in the composition of corals, fishes, sponges, echinoderms, ascidians, molluscs, foraminifera and macroalgae across a pronounced in-to-offshore environmental gradient in the Jakarta Bay-Thousand Islands coral reef complex.

    Science.gov (United States)

    Cleary, D F R; Polónia, A R M; Renema, W; Hoeksema, B W; Rachello-Dolmen, P G; Moolenbeek, R G; Budiyanto, A; Yahmantoro; Tuti, Y; Giyanto; Draisma, S G A; Prud'homme van Reine, W F; Hariyanto, R; Gittenberger, A; Rikoh, M S; de Voogd, N J

    2016-09-30

    Substrate cover, water quality parameters and assemblages of corals, fishes, sponges, echinoderms, ascidians, molluscs, benthic foraminifera and macroalgae were sampled across a pronounced environmental gradient in the Jakarta Bay-Thousand Islands reef complex. Inshore sites mainly consisted of sand, rubble and turf algae with elevated temperature, dissolved oxygen, pH and chlorophyll concentrations and depauperate assemblages of all taxa. Live coral cover was very low inshore and mainly consisted of sparse massive coral heads and a few encrusting species. Faunal assemblages were more speciose and compositionally distinct mid- and offshore compared to inshore. There were, however, small-scale differences among taxa. Certain midshore sites, for example, housed assemblages resembling those typical of the inshore environment but this differed depending on the taxon. Substrate, water quality and spatial variables together explained from 31% (molluscs) to 72% (foraminifera) of the variation in composition. In general, satellite-derived parameters outperformed locally measured parameters. Copyright © 2016 Elsevier Ltd. All rights reserved.

  13. The 2014 coral bleaching and freshwater flood events in Kāne'ohe Bay, Hawai'i.

    Science.gov (United States)

    Bahr, Keisha D; Jokiel, Paul L; Rodgers, Kuʻulei S

    2015-01-01

    Until recently, subtropical Hawai'i escaped the major bleaching events that have devastated many tropical regions, but the continued increases in global long-term mean temperatures and the apparent ending of the Pacific Decadal Oscillation (PDO) cool phase have increased the risk of bleaching events. Climate models and observations predict that bleaching in Hawai'i will occur with increasing frequency and increasing severity over future decades. A freshwater "kill" event occurred during July 2014 in the northern part of Kāne'ohe Bay that reduced coral cover by 22.5% in the area directly impacted by flooding. A subsequent major bleaching event during September 2014 caused extensive coral bleaching and mortality throughout the bay and further reduced coral cover in the freshwater kill area by 60.0%. The high temperature bleaching event only caused a 1.0% reduction in live coral throughout the portion of the bay not directly impacted by the freshwater event. Thus, the combined impact of the low salinity event and the thermal bleaching event appears to be more than simply additive. The temperature regime during the September 2014 bleaching event was analogous in duration and intensity to that of the large bleaching event that occurred previously during August 1996, but resulted in a much larger area of bleaching and coral mortality. Apparently seasonal timing as well as duration and magnitude of heating is important. Coral spawning in the dominant coral species occurs early in the summer, so reservoirs of stored lipid in the corals had been depleted by spawning prior to the September 2014 event. Warm months above 27 °C result in lower coral growth and presumably could further decrease lipid reserves, leading to a bleaching event that was more severe than would have happened if the high temperatures occurred earlier in the summer. Hawaiian reef corals decrease skeletal growth at temperatures above 27 °C, so perhaps the "stress period" actually started long before the

  14. Coral Patch seamount (NE Atlantic – a sedimentological and megafaunal reconnaissance based on video and hydroacoustic surveys

    Directory of Open Access Journals (Sweden)

    C. Wienberg

    2013-05-01

    Full Text Available The present study provides new knowledge about the so far largely unexplored Coral Patch seamount which is located in the NE Atlantic Ocean half-way between the Iberian Peninsula and Madeira. For the first time a detailed hydroacoustic mapping (MBES in conjunction with video surveys (ROV, camera sled were performed to describe the sedimentological and biological characteristics of this sub-elliptical ENE-WSW elongated seamount. Video observations were restricted to the southwestern summit area of Coral Patch seamount (water depth: 560–760 m and revealed that this part of the summit is dominated by exposed hard substrate, whereas soft sediment is just a minor substrate component. Although exposed hardgrounds are dominant for this summit area and, thus, offer suitable habitat for settlement by benthic organisms, the benthic megafauna shows rather scarce occurrence. In particular, scleractinian framework-building cold-water corals are apparently rare with very few isolated and small-sized live occurrences of the species Lophelia pertusa and Madrepora oculata. In contrast, dead coral framework and coral rubble are more frequent pointing to a higher abundance of cold-water corals on Coral Patch during the recent past. This is even supported by the observation of fishing lines that got entangled with rather fresh-looking coral frameworks. Overall, long lines and various species of commercially important fish were frequently observed emphasising the potential of Coral Patch as an important target for fisheries that may have impacted the entire benthic community. Hydroacoustic seabed classification covered the entire summit of Coral Patch and its northern and southern flanks (water depth: 560–2660 m and revealed extended areas dominated by mixed and soft sediments at the northern flank and to a minor degree at its easternmost summit and southern flank. Nevertheless, these data also predict most of the summit area to be dominated by exposed bedrock

  15. Spatio-temporal patterns of coral recruitment at Vamizi Island ...

    African Journals Online (AJOL)

    Spatio-temporal patterns of coral recruitment at Vamizi Island, Quirimbas Archipelago, Mozambique. ... Spatial and temporal patterns of recruitment of reef corals were assessed for the first time in Mozambique ... AJOL African Journals Online.

  16. Coral host transcriptomic states are correlated with Symbiodinium genotypes

    KAUST Repository

    DeSalvo, Michael K.; Sunagawa, Shinichi; Fisher, Paul L.; Voolstra, Christian R.; Iglesias Prieto, Roberto; Medina, Mó nica

    2010-01-01

    susceptibilities. In this study, we monitored Symbiodinium physiological parameters and profiled the coral host transcriptional responses in acclimated, thermally stressed, and recovered fragments of the coral Montastraea faveolata using a custom cDNA gene

  17. Deep-Sea Corals: A New Oceanic Archive

    National Research Council Canada - National Science Library

    Adkins, Jess

    1998-01-01

    Deep-sea corals are an extraordinary new archive of deep ocean behavior. The species Desmophyllum cristagalli is a solitary coral composed of uranium rich, density banded aragonite that I have calibrated for several paleoclimate tracers...

  18. The Alcyonacea (soft corals and sea fans) of Antsiranana Bay ...

    African Journals Online (AJOL)

    Alison J. Evans, Mark D. Steer and Elise M. S. Belle

    cal coral reef ecosystems than the reef - building Scleractinia. However ... Alcyonacea are vulnerable to the many potential threats facing coral .... of the indicator of characteristic Maximum Depth assigned to each site. ..... Marine and coastal.

  19. Zonation of uplifted pleistocene coral reefs on barbados, west indies.

    Science.gov (United States)

    Mesolella, K J

    1967-05-05

    The coral species composition of uplifted Pleistocene reefs on Barbados is very similar to Recent West Indian reefs. Acropora palmata, Acropora cervicornis, and Montastrea annularis are qtuantitatively the most important of the coral species.

  20. Can we measure beauty? Computational evaluation of coral reef aesthetics

    NARCIS (Netherlands)

    Haas, A.F.; Guibert, M.; Foerschner, A.; Co, T.; Calhoun, S.; George, E.; Hatay, M.; Dinsdale, E.; Sandin, S.A.; Smith, J.E.; Vermeij, M.J.A.; Felts, B.; Dustan, P.; Salamon, P.; Rohwer, F.

    2015-01-01

    The natural beauty of coral reefs attracts millions of tourists worldwide resulting in substantial revenues for the adjoining economies. Although their visual appearance is a pivotal factor attracting humans to coral reefs current monitoring protocols exclusively target biogeochemical parameters,

  1. Coral bleaching, hurricane damage, and benthic cover on coral reefs in St. John, U.S. Virgin Islands: A comparison of surveys with the chain transect method and videography

    Science.gov (United States)

    Rogers, C.S.; Miller, J.

    2001-01-01

    The linear chain transect method and videography were used to quantify the percent cover by corals, macroalgae, gorgonians, other living organisms, and substrate along permanent transects on two fringing reefs off St. John. Both methods were used simultaneously on Lameshur reef in November 1998, and on Newfound reef in March and October 1998. Hurricane Georges passed over St. John in September 1998, and a severe coral bleaching episode began the same month. Both methods gave remarkably similar values for coral cover, while the video method gave consistently higher values for gorgonians and macroalgae. The most dramatic difference was in the quantification of bleaching. At Newfound, the chain method indicated 13.4% (SD = 14.1) of the coral tissues were bleached and the video method, 43.4% (SD = 13.0). Corresponding values at Lameshur were 18.1% (SD = 22.3) and 46.5% (SD = 13.3). Although hurricane damage was conspicuous at Newfound reef, neither method showed significant changes in coral cover or other categories as a result of the storm.

  2. Comparing deep-sea fish fauna between coral and non-coral "megahabitats" in the Santa Maria di Leuca cold-water coral province (Mediterranean Sea.

    Directory of Open Access Journals (Sweden)

    Gianfranco D'Onghia

    Full Text Available Two experimental longline surveys were carried out in the Santa Maria di Leuca (SML cold-water coral province (Mediterranean Sea during May-June and September-October 2010 to investigate the effect of corals on fish assemblages. Two types of "megahabitat" characterized by the virtual absence of fishing were explored. One was characterized by complex topography including mesohabitats with carbonate mounds and corals. The other type of megahabitat, although characterized by complex topographic features, lacks carbonate mounds and corals. The fishing vessel was equipped with a 3,000 m monofilament longline with 500 hooks and snoods of 2.5 m in length. A total of 9 hauls, using about 4,500 hooks, were carried out both in the coral megahabitat and in the non-coral megahabitat during each survey. The fish Leucoraja fullonica and Pteroplatytrygon violacea represent new records for the SML coral province. The coral by-catch was only obtained in the coral megahabitat in about 55% of the stations investigated in both surveys. The total catches and the abundance indices of several species were comparable between the two habitat typologies. The species contributing most to the dissimilarity between the two megahabitat fish assemblages were Pagellus bogaraveo, Galeus melastomus, Etmopterus spinax and Helicolenus dactylopterus for density and P. bogaraveo, Conger conger, Polyprion americanus and G. melastomus for biomass. P. bogaraveo was exclusively collected in the coral megahabitat, whereas C. conger, H. dactylopterus and P. americanus were found with greater abundance in the coral than in the non-coral megahabitat. Differences in the sizes between the two megahabitats were detected in E. spinax, G. melastomus, C. conger and H. dactylopterus. Although these differences most probably related to the presence-absence of corals, both megahabitats investigated play the role of attraction-refuge for deep-sea fish fauna, confirming the important role of the whole

  3. Corals Form Characteristic Associations with Symbiotic Nitrogen-Fixing Bacteria

    Science.gov (United States)

    Lema, Kimberley A.; Willis, Bette L.

    2012-01-01

    The complex symbiotic relationship between corals and their dinoflagellate partner Symbiodinium is believed to be sustained through close associations with mutualistic bacterial communities, though little is known about coral associations with bacterial groups able to fix nitrogen (diazotrophs). In this study, we investigated the diversity of diazotrophic bacterial communities associated with three common coral species (Acropora millepora, Acropora muricata, and Pocillopora damicormis) from three midshelf locations of the Great Barrier Reef (GBR) by profiling the conserved subunit of the nifH gene, which encodes the dinitrogenase iron protein. Comparisons of diazotrophic community diversity among coral tissue and mucus microenvironments and the surrounding seawater revealed that corals harbor diverse nifH phylotypes that differ between tissue and mucus microhabitats. Coral mucus nifH sequences displayed high heterogeneity, and many bacterial groups overlapped with those found in seawater. Moreover, coral mucus diazotrophs were specific neither to coral species nor to reef location, reflecting the ephemeral nature of coral mucus. In contrast, the dominant diazotrophic bacteria in tissue samples differed among coral species, with differences remaining consistent at all three reefs, indicating that coral-diazotroph associations are species specific. Notably, dominant diazotrophs for all coral species were closely related to the bacterial group rhizobia, which represented 71% of the total sequences retrieved from tissue samples. The species specificity of coral-diazotroph associations further supports the coral holobiont model that bacterial groups associated with corals are conserved. Our results suggest that, as in terrestrial plants, rhizobia have developed a mutualistic relationship with corals and may contribute fixed nitrogen to Symbiodinium. PMID:22344646

  4. A trait-based approach to advance coral reef science

    DEFF Research Database (Denmark)

    Madin, Joshua S.; Hoogenboom, Mia O.; Connolly, Sean R.

    2016-01-01

    Coral reefs are biologically diverse and ecologically complex ecosystems constructed by stony corals. Despite decades of research, basic coral population biology and community ecology questions remain. Quantifying trait variation among species can help resolve these questions, but progress has been...... a large amount of variation for a range of biological and ecological processes. Such an approach can accelerate our understanding of coral ecology and our ability to protect critically threatened global ecosystems....

  5. Fluctuations in coral health of four common inshore reef corals in response to seasonal and anthropogenic changes in water quality.

    Science.gov (United States)

    Browne, Nicola K; Tay, Jason K L; Low, Jeffrey; Larson, Ole; Todd, Peter A

    2015-04-01

    Environmental drivers of coral condition (maximum quantum yield, symbiont density, chlorophyll a content and coral skeletal growth rates) were assessed in the equatorial inshore coastal waters of Singapore, where the amplitude of seasonal variation is low, but anthropogenic influence is relatively high. Water quality variables (sediments, nutrients, trace metals, temperature, light) explained between 52 and 83% of the variation in coral condition, with sediments and light availability as key drivers of foliose corals (Merulina ampliata, Pachyseris speciosa), and temperature exerting a greater influence on a branching coral (Pocillopora damicornis). Seasonal reductions in water quality led to high chlorophyll a concentrations and maximum quantum yields in corals, but low growth rates. These marginal coral communities are potentially vulnerable to climate change, hence, we propose water quality thresholds for coral growth with the aim of mitigating both local and global environmental impacts. Copyright © 2015 Elsevier Ltd. All rights reserved.

  6. Healthy Living

    Science.gov (United States)

    ... Health Menu Topics Environment & Health Healthy Living Pollution Reduce, Reuse, Recycle Science – How It Works The Natural World Games ... Lessons Topics Expand Environment & Health Healthy Living Pollution Reduce, Reuse, Recycle Science – How It Works The Natural World Games ...

  7. The importance of sponges and mangroves in supporting fish communities on degraded coral reefs in Caribbean Panama.

    Science.gov (United States)

    Seemann, Janina; Yingst, Alexandra; Stuart-Smith, Rick D; Edgar, Graham J; Altieri, Andrew H

    2018-01-01

    Fish communities associated with coral reefs worldwide are threatened by habitat degradation and overexploitation. We assessed coral reefs, mangrove fringes, and seagrass meadows on the Caribbean coast of Panama to explore the influences of their proximity to one another, habitat cover, and environmental characteristics in sustaining biomass, species richness and trophic structure of fish communities in a degraded tropical ecosystem. We found 94% of all fish across all habitat types were of small body size (≤10 cm), with communities dominated by fishes that usually live in habitats of low complexity, such as Pomacentridae (damselfishes) and Gobiidae (gobies). Total fish biomass was very low, with the trend of small fishes from low trophic levels over-represented, and top predators under-represented, relative to coral reefs elsewhere in the Caribbean. For example, herbivorous fishes comprised 27% of total fish biomass in Panama relative to 10% in the wider Caribbean, and the small parrotfish Scarus iseri comprised 72% of the parrotfish biomass. We found evidence that non-coral biogenic habitats support reef-associated fish communities. In particular, the abundance of sponges on a given reef and proximity of mangroves were found to be important positive correlates of reef fish species richness, biomass, abundance and trophic structure. Our study indicates that a diverse fish community can persist on degraded coral reefs, and that the availability and arrangement within the seascape of other habitat-forming organisms, including sponges and mangroves, is critical to the maintenance of functional processes in such ecosystems.

  8. The use of lipids and fatty acids to measure the trophic plasticity of the coral Stylophora subseriata.

    Science.gov (United States)

    Seemann, J; Sawall, Y; Auel, H; Richter, C

    2013-03-01

    Following up on previous investigations on the stress resistance of corals, this study assessed the trophic plasticity of the coral Stylophora subseriata in the Spermonde Archipelago (Indonesia) along an eutrophication gradient. Trophic plasticity was assessed in terms of lipid content and fatty acid composition in the holobiont relative to its plankton (50-300 μm) food as well as the zooxanthellae density, lipid, FA and chlorophyll a content. A cross-transplantation experiment was carried out for 1.5 months in order to assess the trophic potential of corals. Corals, which live in the eutrophied nearshore area showed higher zooxanthellae and chlorophyll a values and higher amounts of the dinoflagellate biomarker FA 18:4n-3. Their lipid contents were maintained at similar to levels from specimens further away from the anthropogenic impact source going up to 14.9 ± 0.9 %. A similarity percentage analysis of the groups holobiont, zooxanthellae and plankton >55 μm found that differences between the FA composition of the holobiont and zooxanthellae symbionts were more distinct in the site closer to the shore, thus heterotrophic feeding became more important. Transplanted corals attained very similar zooxanthellae, chlorophyll a and lipid values at all sites as the specimens originating from those sites, which indicates a high potential for trophic plasticity in the case of a change in food sources, which makes this species competitive and resistant to eutrophication.

  9. Coral Bleaching and Associated Mortality at Mayotte, Western Indian ...

    African Journals Online (AJOL)

    Mamoudzou 97600, Mayotte. Keywords: coral, bleaching, mortality, Mayotte, Western Indian Ocean. Abstract—Bleaching and associated coral mortality were assessed on fringing and barrier reefs on the north and east coasts of Mayotte from 1-24 May 2010. Major bleaching was encountered; nearly 80% of the corals were ...

  10. Exploring coral microbiome assemblages in the South China Sea.

    Science.gov (United States)

    Cai, Lin; Tian, Ren-Mao; Zhou, Guowei; Tong, Haoya; Wong, Yue Him; Zhang, Weipeng; Chui, Apple Pui Yi; Xie, James Y; Qiu, Jian-Wen; Ang, Put O; Liu, Sheng; Huang, Hui; Qian, Pei-Yuan

    2018-02-05

    Coral reefs are significant ecosystems. The ecological success of coral reefs relies on not only coral-algal symbiosis but also coral-microbial partnership. However, microbiome assemblages in the South China Sea corals remain largely unexplored. Here, we compared the microbiome assemblages of reef-building corals Galaxea (G. fascicularis) and Montipora (M. venosa, M. peltiformis, M. monasteriata) collected from five different locations in the South China Sea using massively-parallel sequencing of 16S rRNA gene and multivariate analysis. The results indicated that microbiome assemblages for each coral species were unique regardless of location and were different from the corresponding seawater. Host type appeared to drive the coral microbiome assemblages rather than location and seawater. Network analysis was employed to explore coral microbiome co-occurrence patterns, which revealed 61 and 80 co-occurring microbial species assembling the Galaxea and Montipora microbiomes, respectively. Most of these co-occurring microbial species were commonly found in corals and were inferred to play potential roles in host nutrient metabolism; carbon, nitrogen, sulfur cycles; host detoxification; and climate change. These findings suggest that the co-occurring microbial species explored might be essential to maintain the critical coral-microbial partnership. The present study provides new insights into coral microbiome assemblages in the South China Sea.

  11. Light gradients and optical microniches in coral tissues

    Directory of Open Access Journals (Sweden)

    Daniel eWangpraseurt

    2012-08-01

    Full Text Available Light quantity and quality are among the most important factors determining the physiology and stress response of zooxanthellate corals. Yet, almost nothing is known about the light field that Symbiodinium experiences within their coral host, and the basic optical properties of coral tissue are unknown. We used scalar irradiance microprobes to characterise vertical and lateral light gradients within and across tissues of several coral species. Our results revealed the presence of steep light gradients with PAR (photosynthetically available radiation decreasing by about one order of magnitude from the tissue surface to the coral skeleton. Surface scalar irradiance was consistently higher over polyp tissue than over coenosarc tissue in faviid corals. Coral bleaching increased surface scalar irradiance by ~150% (between 500-700 nm relative to a healthy coral. Photosynthesis peaked around 300 µm within the tissue, which corresponded to a zone exhibiting strongest depletion of scalar irradiance. Deeper coral tissue layers, e.g. ~1000 µm into aboral polyp tissues, harbor optical microniches, where only ~10% of the incident irradiance remains. We conclude that the optical microenvironment of corals exhibits strong lateral and vertical gradients of scalar irradiance, which are affected by both tissue and skeleton optical properties. Our results imply that zooxanthellae populations inhabit a strongly heterogeneous light environment and highlight the presence of different optical microniches in corals; an important finding for understanding the photobiology, stress response, as well as the phenotypic and genotypic plasticity of coral symbionts.

  12. Coral Reefs: A Gallery Program, Grades 7-12.

    Science.gov (United States)

    National Aquarium in Baltimore, MD. Dept. of Education.

    Gallery classes at the National Aquarium in Baltimore give the opportunity to study specific aquarium exhibits which demonstrate entire natural habitats. The coral reef gallery class features the gigantic western Atlantic coral reef (325,000 gallons) with over 1,000 fish. The exhibit simulates a typical Caribbean coral reef and nearby sandy…

  13. The contribution of microbial biotechnology to mitigating coral reef degradation.

    Science.gov (United States)

    Damjanovic, Katarina; Blackall, Linda L; Webster, Nicole S; van Oppen, Madeleine J H

    2017-09-01

    The decline of coral reefs due to anthropogenic disturbances is having devastating impacts on biodiversity and ecosystem services. Here we highlight the potential and challenges of microbial manipulation strategies to enhance coral tolerance to stress and contribute to coral reef restoration and protection. © 2017 The Authors. Microbial Biotechnology published by John Wiley & Sons Ltd and Society for Applied Microbiology.

  14. Developing a multi-stressor gradient for coral reefs

    Science.gov (United States)

    Coral reefs are often found near coastal waters where multiple anthropogenic stressors co-occur at areas of human disturbance. Developing coral reef biocriteria under the U.S. Clean Water Act requires relationships between anthropogenic stressors and coral reef condition to be es...

  15. 78 FR 67128 - Coral Reef Conservation Program; Meeting

    Science.gov (United States)

    2013-11-08

    ... DEPARTMENT OF COMMERCE National Oceanic and Atmospheric Administration Coral Reef Conservation Program; Meeting AGENCY: Coral Reef Conservation Program, Office of Ocean and Coastal Resource Management... meeting of the U.S. Coral Reef Task Force (USCRTF). The meeting will be held in Christiansted, U.S. Virgin...

  16. Diseases of corals with particular reference to Indian reefs

    Digital Repository Service at National Institute of Oceanography (India)

    Ravindran, J.; Raghukumar, C.

    Diseases are one of the factors that change the structure and functioning of coral-reef communities as they cause irreversible damage to the corals Reports on coral diseases describe the etiological agents responsible for the disease and in a few...

  17. Food selectivity and processing by the cold-water coral

    NARCIS (Netherlands)

    Van Oevelen, D.; Mueller, C.E.; Lundälv, T.; Middelburg, J.J.

    2016-01-01

    Cold-water corals form prominent reef ecosystemsalong ocean margins that depend on suspended resourcesproduced in surface waters. In this study, we investigatedfood processing of 13C and 15N labelled bacteria and algaeby the cold-water coral Lophelia pertusa. Coral respiration,tissue incorporation

  18. Nitrogen uptake by phytoplankton and zooxanthellae in a coral atoll

    Digital Repository Service at National Institute of Oceanography (India)

    Wafar, M.V.M.; Devassy, V.P.; Slawyk, G.; Goes, J.I.; Jayakumar, D.A.; Rajendran, A.

    by corals, and the rates varied from 223 to 775 ng-at (mg coral tissue) @u-1@@h@u-1@@ in 4 species. Urea excretion forms about 5% of total N excreted. N balance (NH@d4@@, urea, NO@d3@@) calculated from 4 species of corals shows that zooxanthellae can derive...

  19. Patterns of coral species richness and reef connectivity in Malaysia

    NARCIS (Netherlands)

    Waheed, Z.

    2016-01-01

    Much remains to be discovered about the biodiversity of coral reefs in Malaysia, making this area a priority for coral reef research. This thesis aims to provide insights into the patterns of reef coral species richness and the degree of reef connectivity across Malaysia. For the species richness

  20. Relative gut lengths of coral reef butterflyfishes (Pisces: Chaetodontidae)

    KAUST Repository

    Berumen, Michael L.; Pratchett, Morgan S.; Goodman, Brett Alexander

    2011-01-01

    Variation in gut length of closely related animals is known to generally be a good predictor of dietary habits. We examined gut length in 28 species of butterflyfishes (Chaetodontidae), which encompass a wide range of dietary types (planktivores, omnivores, and corallivores). We found general dietary patterns to be a good predictor of relative gut length, although we found high variation among groups and covariance with body size. The longest gut lengths are found in species that exclusively feed on the living tissue of corals, while the shortest gut length is found in a planktivorous species. Although we tried to control for phylogeny, corallivory has arisen multiple times in this family, confounding our analyses. The butterflyfishes, a speciose family with a wide range of dietary habits, may nonetheless provide an ideal system for future work studying gut physiology associated with specialization and foraging behaviors. © 2011 Springer-Verlag.

  1. Relative gut lengths of coral reef butterflyfishes (Pisces: Chaetodontidae)

    KAUST Repository

    Berumen, Michael L.

    2011-06-17

    Variation in gut length of closely related animals is known to generally be a good predictor of dietary habits. We examined gut length in 28 species of butterflyfishes (Chaetodontidae), which encompass a wide range of dietary types (planktivores, omnivores, and corallivores). We found general dietary patterns to be a good predictor of relative gut length, although we found high variation among groups and covariance with body size. The longest gut lengths are found in species that exclusively feed on the living tissue of corals, while the shortest gut length is found in a planktivorous species. Although we tried to control for phylogeny, corallivory has arisen multiple times in this family, confounding our analyses. The butterflyfishes, a speciose family with a wide range of dietary habits, may nonetheless provide an ideal system for future work studying gut physiology associated with specialization and foraging behaviors. © 2011 Springer-Verlag.

  2. Assisted Living

    Science.gov (United States)

    ... it, too. Back to top What is the Cost for Assisted Living? Although assisted living costs less than nursing home ... Primarily, older persons or their families pay the cost of assisted living. Some health and long-term care insurance policies ...

  3. Cumulative Human Impacts on Coral Reefs: Assessing Risk and Management Implications for Brazilian Coral Reefs

    Directory of Open Access Journals (Sweden)

    Rafael A. Magris

    2018-04-01

    Full Text Available Effective management of coral reefs requires strategies tailored to cope with cumulative disturbances from human activities. In Brazil, where coral reefs are a priority for conservation, intensifying threats from local and global stressors are of paramount concern to management agencies. Using a cumulative impact assessment approach, our goal was to inform management actions for coral reefs in Brazil by assessing their exposure to multiple stressors (fishing, land-based activities, coastal development, mining, aquaculture, shipping, and global warming. We calculated an index of the risk to cumulative impacts: (i assuming uniform sensitivity of coral reefs to stressors; and (ii using impact weights to reflect varying tolerance levels of coral reefs to each stressor. We also predicted the index in both the presence and absence of global warming. We found that 16% and 37% of coral reefs had high to very high risk of cumulative impacts, without and with information on sensitivity respectively, and 42% of reefs had low risk to cumulative impacts from both local and global stressors. Our outputs are the first comprehensive spatial dataset of cumulative impact on coral reefs in Brazil, and show that areas requiring attention mostly corresponded to those closer to population centres. We demonstrate how the relationships between risks from local and global stressors can be used to derive strategic management actions.

  4. Thermal stress and coral cover as drivers of coral disease outbreaks.

    Directory of Open Access Journals (Sweden)

    John F Bruno

    2007-06-01

    Full Text Available Very little is known about how environmental changes such as increasing temperature affect disease dynamics in the ocean, especially at large spatial scales. We asked whether the frequency of warm temperature anomalies is positively related to the frequency of coral disease across 1,500 km of Australia's Great Barrier Reef. We used a new high-resolution satellite dataset of ocean temperature and 6 y of coral disease and coral cover data from annual surveys of 48 reefs to answer this question. We found a highly significant relationship between the frequencies of warm temperature anomalies and of white syndrome, an emergent disease, or potentially, a group of diseases, of Pacific reef-building corals. The effect of temperature was highly dependent on coral cover because white syndrome outbreaks followed warm years, but only on high (>50% cover reefs, suggesting an important role of host density as a threshold for outbreaks. Our results indicate that the frequency of temperature anomalies, which is predicted to increase in most tropical oceans, can increase the susceptibility of corals to disease, leading to outbreaks where corals are abundant.

  5. High Latitude Corals Tolerate Severe Cold Spell

    Directory of Open Access Journals (Sweden)

    Chenae A. Tuckett

    2018-01-01

    Full Text Available Climatically extreme weather events often drive long-term ecological responses of ecosystems. By disrupting the important symbiosis with zooxanthellae, Marine Cold Spells (MCS can cause bleaching and mortality in tropical and subtropical scleractinian corals. Here we report on the effects of a severe MCS on high latitude corals, where we expected to find bleaching and mortality. The MCS took place off the coast of Perth (32°S, Western Australia in 2016. Bleaching was assessed before (2014 and after (2017 the MCS from surveys of permanent plots, and with timed bleaching searches. Temperature data was recorded with in situ loggers. During the MCS temperatures dipped to the coldest recorded in ten years (15.3°C and periods of <17°C lasted for up to 19 days. Only 4.3% of the surveyed coral colonies showed signs of bleaching. Bleaching was observed in 8 species where those most affected were Plesiastrea versipora and Montipora mollis. These findings suggest that high latitude corals in this area are tolerant of cold stress and are not persisting near a lethal temperature minimum. It has not been established whether other environmental conditions are limiting these species, and if so, what the implications are for coral performance on these reefs in a warmer future.

  6. Coral skeletons defend against ultraviolet radiation.

    Directory of Open Access Journals (Sweden)

    Ruth Reef

    Full Text Available BACKGROUND: Many coral reef organisms are photosynthetic or have evolved in tight symbiosis with photosynthetic symbionts. As such, the tissues of reef organisms are often exposed to intense solar radiation in clear tropical waters and have adapted to trap and harness photosynthetically active radiation (PAR. High levels of ultraviolet radiation (UVR associated with sunlight, however, represent a potential problem in terms of tissue damage. METHODOLOGY/PRINCIPAL FINDINGS: By measuring UVR and PAR reflectance from intact and ground bare coral skeletons we show that the property of calcium carbonate skeletons to absorb downwelling UVR to a significant extent, while reflecting PAR back to the overlying tissue, has biological advantages. We placed cnidarians on top of bare skeletons and a UVR reflective substrate and showed that under ambient UVR levels, UVR transmitted through the tissues of cnidarians placed on top of bare skeletons were four times lower compared to their counterparts placed on a UVR reflective white substrate. In accordance with the lower levels of UVR measured in cnidarians on top of coral skeletons, a similar drop in UVR damage to their DNA was detected. The skeletons emitted absorbed UVR as yellow fluorescence, which allows for safe dissipation of the otherwise harmful radiation. CONCLUSIONS/SIGNIFICANCE: Our study presents a novel defensive role for coral skeletons and reveals that the strong UVR absorbance by the skeleton can contribute to the ability of corals, and potentially other calcifiers, to thrive under UVR levels that are detrimental to most marine life.

  7. Ecological Processes and Contemporary Coral Reef Management

    Directory of Open Access Journals (Sweden)

    Angela Dikou

    2010-05-01

    Full Text Available Top-down controls of complex foodwebs maintain the balance among the critical groups of corals, algae, and herbivores, thus allowing the persistence of corals reefs as three-dimensional, biogenic structures with high biodiversity, heterogeneity, resistance, resilience and connectivity, and the delivery of essential goods and services to societies. On contemporary reefs world-wide, however, top-down controls have been weakened due to reduction in herbivory levels (overfishing or disease outbreak while bottom-up controls have increased due to water quality degradation (increase in sediment and nutrient load and climate forcing (seawater warming and acidification leading to algal-dominated alternate benthic states of coral reefs, which are indicative of a trajectory towards ecological extinction. Management to reverse common trajectories of degradation for coral reefs necessitates a shift from optimization in marine resource use and conservation towards building socio-economic resilience into coral reef systems while attending to the most manageable human impacts (fishing and water quality and the global-scale causes (climate change.

  8. Multi-proxy experimental calibration in cold water corals for high resolution paleoreconstructions

    Science.gov (United States)

    Pelejero, C.; Martínez-Dios, A.; Ko, S.; Sherrell, R. M.; Kozdon, R.; López-Sanz, À.; Calvo, E.

    2017-12-01

    Cold-water corals (CWCs) display an almost cosmopolitan distribution over a wide range of depths. Similar to their tropical counterparts, they can provide continuous, high-resolution records of up to a century or more. Several CWC elemental and isotopic ratios have been suggested as useful proxies, but robust calibrations under controlled conditions in aquaria are needed. Whereas a few such calibrations have been performed for tropical corals, they are still pending for CWCs. This reflects the technical challenges involved in maintaining these slow-growing animals alive during the long-term experiments required to achieve sufficient skeletal growth for geochemical analyses. We will show details of the set up and initial stages of a long-term experiment being run at the ICM (Barcelona), where live specimens (>150) of Desmophyllum dianthus sampled in Comau Fjord (Chile) are kept under controlled and manipulated physical chemistry (temperature, pH, phosphate, barium, cadmium) and feeding conditions. With this set up, we aim to calibrate experimentally several specific elemental ratios including P/Ca, Ba/Ca, Cd/Ca, B/Ca, U/Ca and Mg/Li as proxies of nutrients dynamics, pH, carbonate ion concentration and temperature. For the trace element analysis, we are analyzing coral skeletons using Laser Ablation Inductively Coupled Plasma Mass Spectrometry (LA-ICP-MS), running quantitative analyses on spot sizes of tens of microns, and comparing to micromilling and solution ICP-MS. Preliminary data obtained using these techniques will be presented, as well as measurements of calcification rate. Since coral-water corals are potentially vulnerable to ocean acidification, the same experiment is being exploited to assess potential effects of the pH stressor in D. dianthus; main findings to date will be summarized.

  9. A survey of cellular reactions to environmental stress and disease in Caribbean scleractinian corals

    Science.gov (United States)

    Peters, Esther C.

    1984-03-01

    Despite growing concern about the demise of coral reefs in many areas of the world, few studies have investigated the possibility that bacteria- or virus-caused diseases may be important agents in the disappearance of living coral tissue from reefs, and that their occurrence and transmission may be influenced by natural or man-made changes in water quality, particularly increased sedimentation and turbidity. One forereef site off St. Croix, U. S. Virgin Islands, and three shallow-water reef sites off Puerto Rico were examined for variations in coral composition, local environmental conditions, and the presence of possible diseases in the stony corals. Visual observations were supplemented with standard histopathological examination under the light microscope of tissues from 257 specimens (representing 9 genera and 13 species), along with additional samples obtained from the Netherlands Antilles, the Grenadines, the Florida Keys and the Smithsonian Coral Reef Microcosm. This procedure proved to be necessary to accurately determine the condition of the colony, to detect the presence of microorganisms, and to correlate tissue health and microparasite infestations with apparent symptoms. These lesions varied with the species and the site. For example, off Guayanilla Bay, three species showed increased or decreased mucosecretory cell development, and another exhibited an unusual microparasite, which may be related to the chronic sedimentation at this site. Although colonies of several species showed signs of “white band disease” at five locations, bacterial colonies composed of Gram-negative rods were present only in acroporid tissues from the relatively pristine St. Croix site and the Netherlands Antilles. The distribution and possible mode of occurrence of these and other diseases and microparasite infestations suggest that acute changes in microhabitat conditions or injuries to individual colonies may be as important to the development of some of these lesions as

  10. IODP Expedition 307 Drills Cold-Water Coral Mound Along the Irish Continental Margin

    Directory of Open Access Journals (Sweden)

    Trevor Williams

    2006-03-01

    Full Text Available Introduction Over the past decade, oceanographic and geophysical surveys along the slope of the Porcupine Seabight off the southwestern continental margin of Ireland have identified upwards of a thousand enigmatic mound-like structures (Figs. 1 and 2. The mounds of the Porcupine Seabight rise from the seafl oor in water depths of 600–900 m and formimpressive conical bodies several kilometers wide and up to 200 m high. Although a few mounds such as Thérèse Mound and Galway Mound are covered by a thriving thicket of coldwater corals, most mound tops and fl anks are covered by dead coral rubble or are entirely buried by sediment (De Mol et al., 2002; Fig. 2, Beyer et al., 2003. Lophelia pertusa (Fig.3 and Madrepora oculata are the most prominent cold-water corals growing without photosynthetic symbionts. The widespread discovery of large and numerous coral-bearing banks and the association of these corals with the mounds have generated signifi cant interest as to the composition, origin and development of these mound structures.Challenger Mound, in the Belgica mound province, has an elongated shape oriented along a north-northeast to south-southwest axis and ispartially buried under Pleistocene drift sediments. In high-resolution seismic profiles the mounds appear to root on an erosion surface (van Rooij et al., 2003. During IODP Expedition307 the Challenger Mound in the Porcupine Seabight was drilled with the goal of unveiling the origin and depositional processes withinthese intriguing sedimentary structures. Challenger Mound, unlike its near neighbors the Thérèse and Galway mounds, has little to no livecoral coverage and, therefore, was chosen as the main target for drilling activities, so that no living ecosystem would be disturbed.

  11. Temperature-dependent inhibition of opportunistic Vibrio pathogens by native coral commensal bacteria.

    Science.gov (United States)

    Frydenborg, Beck R; Krediet, Cory J; Teplitski, Max; Ritchie, Kim B

    2014-02-01

    Bacteria living within the surface mucus layer of corals compete for nutrients and space. A number of stresses affect the outcome of this competition. The interactions between native microorganisms and opportunistic pathogens largely determine the coral holobiont's overall health and fitness. In this study, we tested the hypothesis that commensal bacteria isolated from the mucus layer of a healthy elkhorn coral, Acropora palmata, are capable of inhibition of opportunistic pathogens, Vibrio shiloi AK1 and Vibrio coralliilyticus. These vibrios are known to cause disease in corals and their virulence is temperature dependent. Elevated temperature (30 °C) increased the cell numbers of one commensal and both Vibrio pathogens in monocultures. We further tested the hypothesis that elevated temperature favors pathogenic organisms by simultaneously increasing the fitness of vibrios and decreasing the fitness of commensals by measuring growth of each species within a co-culture over the course of 1 week. In competition experiments between vibrios and commensals, the proportion of Vibrio spp. increased significantly under elevated temperature. We finished by investigating several temperature-dependent mechanisms that could influence co-culture differences via changes in competitive fitness. The ability of Vibrio spp. to utilize glycoproteins found in A. palmata mucus increased or remained stable when exposed to elevated temperature, while commensals' tended to decrease utilization. In both vibrios and commensals, protease activity increased at 30 °C, while chiA expression increased under elevated temperatures for Vibrio spp. These results provide insight into potential mechanisms through which elevated temperature may select for pathogenic bacterial dominance and lead to disease or a decrease in coral fitness.

  12. Coral bleaching on high-latitude marginal reefs at Sodwana Bay, South Africa

    Energy Technology Data Exchange (ETDEWEB)

    Celliers, Louis; Schleyer, Michael H

    2002-12-01

    Coral bleaching, involving the expulsion of symbiotic zooxanthellae from the host cells, poses a major threat to coral reefs throughout their distributional range. The role of temperature in coral bleaching has been extensively investigated and is widely accepted. A bleaching event was observed on the marginal high-latitude reefs of South Africa located at Sodwana Bay during the summer months of 2000. This was associated with increased sea temperatures with high seasonal peaks in summer and increased radiation in exceptionally clear water. The bleaching was limited to Two-mile Reef and Nine-mile Reef at Sodwana Bay and affected <12% of the total living cover on Two-mile Reef. Montipora spp., Alveopora spongiosa and Acropora spp. were bleached, as well as some Alcyoniidae (Sinularia dura, Lobophytum depressum, L. patulum). A cyclical increase in sea temperature (with a period of 5-6 years) was recorded during 1998-2000 in addition to the regional temperature increase caused by the El Nino Southern Oscillation phenomenon. The mean sea temperature increased at a rate of 0.27 deg. C year{sup -1} from May 1994 to April 2000. High maximum temperatures were measured (>29 deg. C). The lowest mean monthly and the mean maximum monthly temperatures at which coral bleaching occurred were 27.5 and 28.8 deg. C, respectively, while the duration for which high temperatures occurred in 2000 was 67 days at {>=}27.5 deg. C (4 days at {>=}28.8 deg. C). Increased water clarity and radiation appeared to be a synergistic cause in the coral bleaching encountered at Sodwana Bay.

  13. Local endemicity and high diversity characterise high-latitude coral- Symbiodinium partnerships

    Science.gov (United States)

    Wicks, L. C.; Sampayo, E.; Gardner, J. P. A.; Davy, S. K.

    2010-12-01

    Obligate symbiotic dinoflagellates ( Symbiodinium) residing within the tissues of most reef invertebrates are important in determining the tolerance range of their host. Coral communities living at high latitudes experience wide fluctuations in environmental conditions and thus provide an ideal system to gain insights into the range within which the symbiotic relationship can be sustained. Further, understanding whether and how symbiont communities associated with high-latitude coral reefs are different from their tropical counterparts will provide clues to the potential of corals to cope with marginal or changing conditions. However, little is known of the host and symbiont partnerships at high latitudes. Symbiodinium diversity and specificity of high-latitude coral communities were explored using denaturing gradient gel electrophoresis (PCR-DGGE) analysis of the internal transcribed spacer regions (ITS1 and ITS2) of the ribosomal DNA at Lord Howe Island (31°S; Australia), and the Kermadec Islands (29°S; New Zealand). All but one host associated with clade C Symbiodinium, the exception being a soft coral ( Capnella sp.) that contained Symbiodinium B1. Besides ‘host-generalist’ Symbiodinium types C1 and C3, approximately 72% of the Symbiodinium identified were novel C types, and zonation of symbionts in relation to environmental parameters such as depth and turbidity was evident in certain host species. The high-latitude Symbiodinium communities showed little overlap and relatively high diversity compared with communities sampled on the tropical Great Barrier Reef. Although host specificity was maintained in certain species, others shared symbionts and this potential reduction of fidelity at high-latitude locations may be the result of locally challenging and highly variable environmental conditions.

  14. Co-existence of Coral Reef Conservation and Tourism at Pigeon Island National Park

    Directory of Open Access Journals (Sweden)

    Nishanthi Marian Perera

    2016-11-01

    Full Text Available AbstractPigeon islands National Park (PINP is one of the three Marine National Parks in Sri Lanka with coral reefs being the major habitat protected. A study was undertaken at PINP with the objective of understanding the challenges encountered and opportunities available for managing the park addressing both coral reef conservation and increasing tourism potential. Field visits, formal and informal group discussions, expert opinions, web based information and literature surveys were the methodology utilized.  Despise the impose of an entrance fee in May 2011,  146,375 tourists visited the 471 ha park within 40 month period indicating that one hectare of coral reefs can earn more revenue than larger terrestrial parks with charismatic species such as elephants.  Foreign tourist arrivals had increased from 11.9% in 2011 to 25.13% by 2014.  Visitor reviews indicates that their experience was either excellent (46% or very good (30% due to abundance of marine life, while12% had either a poor or a terrible visitor experience at the site owing to overcrowding, reef damage and high price. With only 21% of live coral cover in 2013, it is evident that the reef is being degraded, indicating that a Protected Area which emphasizes on collecting user-fee revenues can lose sight of its primary conservation objectives and is not undertaking sustainable tourism.  Park management effectiveness is not at desirable level (43%, mainly due to non- implementation of a scientifically based management plan. A continuous monitoring programme to check the health of the reef is need, while the introduction of a multi-tiered user fee structures can enhance the economic reruns.  Incorporating PINP into wider Seascape/landscape management through utilizing Special Area Management approach needed to be promoted. Key Words: Coral Reefs; Pigeon Island National Park; Management Effectiveness; Sustainable Tourism; Stakeholders     

  15. Lower Mesophotic Coral Communities (60-125 m Depth of the Northern Great Barrier Reef and Coral Sea.

    Directory of Open Access Journals (Sweden)

    Norbert Englebert

    Full Text Available Mesophotic coral ecosystems in the Indo-Pacific remain relatively unexplored, particularly at lower mesophotic depths (≥60 m, despite their potentially large spatial extent. Here, we used a remotely operated vehicle to conduct a qualitative assessment of the zooxanthellate coral community at lower mesophotic depths (60-125 m at 10 different locations in the Great Barrier Reef Marine Park and the Coral Sea Commonwealth Marine Reserve. Lower mesophotic coral communities were present at all 10 locations, with zooxanthellate scleractinian corals extending down to ~100 metres on walls and ~125 m on steep slopes. Lower mesophotic coral communities were most diverse in the 60-80 m zone, while at depths of ≥100 m the coral community consisted almost exclusively of the genus Leptoseris. Collections of coral specimens (n = 213 between 60 and 125 m depth confirmed the presence of at least 29 different species belonging to 18 genera, including several potential new species and geographic/depth range extensions. Overall, this study highlights that lower mesophotic coral ecosystems are likely to be ubiquitous features on the outer reefs of the Great Barrier Reef and atolls of the Coral Sea, and harbour a generic and species richness of corals that is much higher than thus far reported. Further research efforts are urgently required to better understand and manage these ecosystems as part of the Great Barrier Reef Marine Park and Coral Sea Commonwealth Marine Reserve.

  16. Environmental drivers of recruitment success in Caribbean corals : Applications to aid the recovery of threatened coral populations

    NARCIS (Netherlands)

    Chamberland, V.F.

    2018-01-01

    Caribbean coral reefs are amongst the most threatened marine ecosystems on Earth. About one third of their reef-building coral species (Scleractinia) are currently at risk of extinction due to habitat destruction, overexploitation and climate change. The successful establishment of coral larvae,