CRED REA Fish Team Belt Transect Survey at Alamagan, Marianas Archipelago, 2005

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Belt transects along 3 consecutively-placed, 25m transect lines were surveyed as part of Rapid Ecological Assessments conducted at 3 sites at Alamagan in the...

CRED REA Fish Team Belt Transect Survey at Sarigan Island, CNMI, 2003

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Belt transects along 3 consecutively-placed, 25m transect lines were surveyed as part of Rapid Ecological Assessments conducted at 3 sites at Sarigan in the...

CRED REA Fish Team Belt Transect Survey at Guam, Marianas Archipelago, 2007

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Belt transects along 3 consecutively-placed, 25m transect lines were surveyed as part of Rapid Ecological Assessments conducted at 10 sites at Guam in the Marianas...

CRED REA Fish Team Belt Transect Survey at Rota, Marianas Archipelago, 2005

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Belt transects along 3 consecutively-placed, 25m transect lines were surveyed as part of Rapid Ecological Assessments conducted at 6 sites at Rota in the Marianas...

CRED REA Fish Team Belt Transect Survey at Saipan, Marianas Archipelago, 2005

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Belt transects along 3 consecutively-placed, 25m transect lines were surveyed as part of Rapid Ecological Assessments conducted at 8 sites at Saipan in the Marianas...

NOAA Polyline Shapefile - ROV transect Lines, US Caribbean - North East Reserve, Puerto Rico - M-I907-NF-12 (2012), UTM 20N NAD83

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — This shapefile denotes the transect lines of the underwater video and photos that were collected by NOAA scientists using a Spectrum Phantom S2 ROV (remotely...

NOAA Polyline Shapefile - ROV transect Lines, US Caribbean - North East Reserve, Puerto Rico - M-I907-NF-13 (2013), UTM 20N NAD83

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — This shapefile denotes the transect lines of the underwater video and photos that were collected by NOAA scientists using a Spectrum Phantom S2 ROV (remotely...

CRED REA Fish Team Belt Transect Survey at Niihau, Main Hawaiian Islands, 2006

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Belt transects along 3 consecutively-placed, 25m transect lines were surveyed as part of Rapid Ecological Assessments conducted at 6 sites at Niihau in the Main...

NOAA Line Shapefile- Locations of Phantom S2 ROV Underwater Video Transects, US Virgin Islands, Project NF-05-05, 2005, UTM 20N WGS84

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — This dataset contains a line shapefile showing the trackline of various Remotely Operated Vehicle (ROV) underwater video transects in the US Virgin Islands.NOAA's...

Line Transect Surveys Underdetect Terrestrial Mammals: Implications for the Sustainability of Subsistence Hunting

Science.gov (United States)

Levi, Taal; Oliveira, Luiz F. B.; Luzar, Jeffrey B.; Overman, Han; Read, Jane M.

2016-01-01

Conservation of Neotropical game species must take into account the livelihood and food security needs of local human populations. Hunting management decisions should therefore rely on abundance and distribution data that are as representative as possible of true population sizes and dynamics. We simultaneously applied a commonly used encounter-based method and an infrequently used sign-based method to estimate hunted vertebrate abundance in a 48,000-km2 indigenous landscape in southern Guyana. Diurnal direct encounter data collected during three years along 216, four-kilometer -long transects consistently under-detected many diurnal and nocturnal mammal species readily detected through sign. Of 32 species analyzed, 31 were detected by both methods; however, encounters did not detect one and under-detected another 12 of the most heavily hunted species relative to sign, while sign under-detected 12 never or rarely collected species relative to encounters. The six most important game animals in the region, all ungulates, were not encountered at 11–40% of village and control sites or on 29–72% of transects where they were detected by sign. Using the sign methodology, we find that tapirs, one of the terrestrial vertebrates considered most sensitive to overexploitation, are present at many sites where they were never visually detected during distance sampling. We find that this is true for many other species as well. These high rates of under-detection suggest that behavioral changes in hunted populations may affect apparent occurrence and abundance of these populations. Accumulation curves (detection of species on transects) were much steeper for sign for 12 of 16 hunted species than for encounters, but that pattern was reversed for 12 of 16 species unhunted in our area. We conclude that collection of sign data is an efficient and effective method of monitoring hunted vertebrate populations that complements encounter and camera-trapping methods in areas impacted by

CRED REA Fish Team Belt Transect Survey at Baker, Pacific Remote Island Areas, 2006

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Belt transects along 3 consecutively-placed, 25m transect lines were surveyed as part of Rapid Ecological Assessments conducted at 9 sites at Baker in the Pacific...

CRED REA Fish Team Belt Transect Survey at Maro Reef, NW Hawaiian Islands, 2006

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Belt transects along 3 consecutively-placed, 25m transect lines were surveyed as part of Rapid Ecological Assessments conducted at 9 sites at Maro Reef in the NW...

Using hidden Markov models to deal with availability bias on line transect surveys.

Science.gov (United States)

Borchers, D L; Zucchini, W; Heide-Jørgensen, M P; Cañadas, A; Langrock, R

2013-09-01

We develop estimators for line transect surveys of animals that are stochastically unavailable for detection while within detection range. The detection process is formulated as a hidden Markov model with a binary state-dependent observation model that depends on both perpendicular and forward distances. This provides a parametric method of dealing with availability bias when estimates of availability process parameters are available even if series of availability events themselves are not. We apply the estimators to an aerial and a shipboard survey of whales, and investigate their properties by simulation. They are shown to be more general and more flexible than existing estimators based on parametric models of the availability process. We also find that methods using availability correction factors can be very biased when surveys are not close to being instantaneous, as can estimators that assume temporal independence in availability when there is temporal dependence. © 2013, The International Biometric Society.

CRED REA Fish Team Belt Transect Survey at Howland, Pacific Remote Island Areas (PRIAS), 2006

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Belt transects along 3 consecutively-placed, 25m transect lines were surveyed as part of Rapid Ecological Assessments conducted at 6 sites at Howland in the Pacific...

Changes in the structural properties of peripheral nerves after transection.

Science.gov (United States)

Toby, E B; Meyer, B M; Schwappach, J; Alvine, G

1996-11-01

Changes in peripheral nerve structural properties after transection were measured weekly for 5 weeks in the distal stump of the sciatic nerve in 50 Sprague-Dawley rats. Each week after transection, the distal stump of the transected nerve showed increased stiffness when compared to intact nerves. Linear elastic stiffness reached a maximum at weeks 1 and 2 after transection, when the transected nerves were 15% stiffer than the contralateral control sides. Toughness was also increased and reached a maximum at week 4 with a 50% difference between values for experimental and control sides. Overall failure load was between 21% and 27% greater, peaking at week 3. An increase in stiffness of the distal stump would result in increased tension at the suture line, as the nerve gap is overcome when performing a delayed neurorraphy. These data suggest, with respect to structural properties, that an end-to-end repair should be carried out at the time of injury; after only 1 week, significant stiffness in the distal segment of the nerve developed, which should result in an increase in tension at the repair site.

NOAA Polyline Shapefile - ROV transect Lines, US Caribbean - North East Reserve, Puerto Rico - M-I907-NF-12 (2012), UTM 20N NAD83 (NCEI Accession 0131856)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — This shapefile denotes the transect lines of the underwater video and photos that were collected by NOAA scientists using a Spectrum Phantom S2 ROV (remotely...

Plotting of bathythermograph transect data on a printer

Science.gov (United States)

Reynolds, James B.; McLain, Douglas R.

1971-01-01

A program for plotting bathythermograph transect data on a computer (IBM 1130) printer is available from the Great Lakes Fishery Laboratory. Temperature values are printed in positions proportional to their depths and distances from shore. Contour lines are drawn manually through the plotted points.

NOAA Line Shapefile- Locations of Phantom S2 ROV Underwater Video Transects, US Virgin Islands, Project NF-05-05, 2005, UTM 20N WGS84 (NCEI Accession 0131860)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — This dataset contains a line shapefile showing the trackline of various Remotely Operated Vehicle (ROV) underwater video transects in the US Virgin Islands.NOAA's...

Microbial processes and communities in sediment samples along a transect across the Lusi mud volcano, Indonesia

Science.gov (United States)

Krueger, Martin; Straaten, Nontje; Mazzini, Adriano

2015-04-01

The Lusi eruption represents one of the largest ongoing sedimentary hosted geothermal systems. This eruption started in 2006 following to a 6.3 M earthquake that stroke Java Island. Since then it has been spewing boiling mud from a central crater with peaks reaching 180.000 m3 per day. Today an area of about 8 km2 is covered by locally dried mud breccia where a network of hundreds of satellite seeping pools is active. Numerous investigations focused on the study of offshore microbial colonies that commonly thrive at offshore methane seeps and mud volcanoes, however very little has been done for onshore seeping structures. Lusi represents a unique opportunity to complete a comprehensive study of onshore microbial communities fed by the seepage of CH4 and CO2 as well as of heavier liquid hydrocarbons originating from several km below the surface. We conducted a sampling campaign at the Lusi site collecting samples of fresh mud close to the erupting crater using a remote controlled drone. In addition we completed a transect towards outer parts of the crater to collect older, weathered samples for comparison. In all samples active microorganisms were present. The highest activities for CO2 and CH4 production as well as for CH4 oxidation and hydrocarbon degradation were observed in medium-age mud samples collected roughly in the middle of the transect. Rates for aerobic methane oxidation were high, as was the potential of the microbial communities to degrade hydrocarbons (oils, alkanes, BTEX tested). The data suggests a transition of microbial populations from an anaerobic, hydrocarbon-driven metabolism in fresher samples from center or from small seeps to more generalistic, aerobic microbial communities in older, more consolidated sediments. Currently, the microbial communities in the different sediment samples are analyzed using quantitative PCR and T-RFLP combined with MiSeq sequencing. This study represents an initial step to better understand onshore seepage

Primary non-transecting bulbar urethroplasty long-term success rates are similar to transecting urethroplasty.

Science.gov (United States)

Anderson, Kirk M; Blakely, Stephen A; O'Donnell, Colin I; Nikolavsky, Dmitriy; Flynn, Brian J

2017-01-01

To review the long-term outcomes of transecting versus non-transecting urethroplasty to repair bulbar urethral strictures. A retrospective review was conducted of 342 patients who underwent anterior urethroplasty performed by a single surgeon from 2003 to 2014. Patients were excluded from further analysis if there had been prior urethroplasty, stricture location outside the bulbous urethra, or age urethroplasty. In the non-transecting group, surgical techniques used included non-transecting anastomotic urethroplasty and dorsal and/or ventral buccal grafting. The primary endpoint was stricture resolution in transecting vs. non-transecting bulbar urethroplasty. Success was defined as freedom from secondary procedures including dilation, urethrotomy, or repeat urethroplasty. One hundred and fifty-two patients met inclusion criteria. At a mean follow-up of 65 months (range: 10-138 months), stricture-free recurrence in the transecting and non-transecting groups was similar, 83% (n = 85/102) and 82% (n = 41/50), respectively (p = 0.84). Surgical technique (p = 0.91), stricture length (p = 0.8), and etiology (p = 0.6) did not affect stricture recurrence rate on multivariate analysis. There was no difference detected in time to stricture recurrence (p = 0.21). In this retrospective series, transecting and non-transecting primary bulbar urethroplasty resulted in similar long-term stricture resolution rate. Prospective studies are needed to determine what differences may present in outcomes related to sexual function and long-term success.

Location and description of transects for ecological studies in floodplain forests of the lower Suwannee River, Florida

Science.gov (United States)

Lewis, L.J.; Light, H.M.; Darst, M.R.

2001-01-01

Twelve transects were established in floodplain forests along the lower Suwannee River, Florida, as the principal data collection sites for a comprehensive study conducted by the U.S. Geological Survey and the Suwannee River Water Management District from 1996 to 2001. Data collected along the 12 transects included hydrologic conditions, land-surface elevations, soils, and vegetation of floodplain forests in relation to river flow. Transect locations are marked in the field with permanent markers at approximately 30 meter intervals. Detailed descriptions of the 12 transects and their locations are provided so that they can be used for future ecological studies. Descriptions of the transects include contact information necessary for access to the property on which the transects are located, maps showing transect locations and routes from the nearest city or major road, small scale maps of each transect showing marker locations, latitude and longitude of each marker, compass bearings of each transect line and graphs showing land-surface elevations of the transect with marker locations.

Estimating the encounter rate variance in distance sampling

Science.gov (United States)

Fewster, R.M.; Buckland, S.T.; Burnham, K.P.; Borchers, D.L.; Jupp, P.E.; Laake, J.L.; Thomas, L.

2009-01-01

The dominant source of variance in line transect sampling is usually the encounter rate variance. Systematic survey designs are often used to reduce the true variability among different realizations of the design, but estimating the variance is difficult and estimators typically approximate the variance by treating the design as a simple random sample of lines. We explore the properties of different encounter rate variance estimators under random and systematic designs. We show that a design-based variance estimator improves upon the model-based estimator of Buckland et al. (2001, Introduction to Distance Sampling. Oxford: Oxford University Press, p. 79) when transects are positioned at random. However, if populations exhibit strong spatial trends, both estimators can have substantial positive bias under systematic designs. We show that poststratification is effective in reducing this bias. ?? 2008, The International Biometric Society.

The traveling transect

DEFF Research Database (Denmark)

Braae, Ellen Marie; Diedrich, Lisa; Lee, Gini

2013-01-01

, when working with the more unpredictable qualities of sites as in water-made landscapes, designers often lack mapping and representational tools capable of capturing and expressing ephemeral qualities - dynamics, relationships and atmospheres. These abstract qualities, that exist over physical site...... in everyday practice, the Canarysect project negotiates testing and capture of the dynamic, relational and atmospheric qualities encountered along lines of transect across island lands and waters. Individual sketching, photography and modelling gestures merge into a common archipelago of thinking around......The practice of landscape architecture is most often a cultivation of open space alongside an open-ended dialogue with the presence and complexities of the cultural and natural features of places, usually resulting in projects generating site resolution rather than pure invention ex nihilo. However...

Using mark-recapture distance sampling methods on line transect surveys

Science.gov (United States)

Burt, Louise M.; Borchers, David L.; Jenkins, Kurt J.; Marques, Tigao A

2014-01-01

Mark–recapture distance sampling (MRDS) methods are widely used for density and abundance estimation when the conventional DS assumption of certain detection at distance zero fails, as they allow detection at distance zero to be estimated and incorporated into the overall probability of detection to better estimate density and abundance. However, incorporating MR data in DS models raises survey and analysis issues not present in conventional DS. Conversely, incorporating DS assumptions in MR models raises issues not present in conventional MR. As a result, being familiar with either conventional DS methods or conventional MR methods does not on its own put practitioners in good a position to apply MRDS methods appropriately. This study explains the sometimes subtly different varieties of MRDS survey methods and the associated concepts underlying MRDS models. This is done as far as possible without giving mathematical details – in the hope that this will make the key concepts underlying the methods accessible to a wider audience than if we were to present the concepts via equations.

Prognosis of patients with transected melanomas.

Science.gov (United States)

Martires, Kathryn J; Nandi, Tina; Honda, Kord; Cooper, Kevin D; Bordeaux, Jeremy S

2013-04-01

The management of melanoma is directly related to Breslow's depth. Biopsying melanomas in a fashion that transects the deep margin precludes an accurate measurement of the true depth. To examine the prognosis of melanomas transected along the deep margins, as well as cases where no residual melanoma was seen on re-excision after transection. Records from a cohort of patients at one institution were examined from 1996 through 2007. Patients were considered to have "transected" melanomas if tumor cells were present on the deep margin of the biopsy. Overall survival was determined. Seven hundred fourteen patients were examined. 171 (24%) of all melanomas were transected. 101(59%) of those lacked tumor cells on re-excision. Patients with transected melanomas were older (OR = 1.03, p < .001), and had higher Breslow's depths (OR = 1.21, p < .001) than those without transected tumors. Those with no residual melanoma after transection were younger (OR = 0.98, p = .010) and more likely to have no lymph node involvement (OR = 2.23, p = .037). Neither transection (p = .760), nor lack of residual melanoma on re-excision after transection (p = .793) influenced survival. A high number of melanomas are transected at diagnosis, many of which lack visible tumor. The original Breslow's depth of transected melanomas without residual tumor on re-excision accurately predicts survival and prognosis. © 2013 by the American Society for Dermatologic Surgery, Inc. Published by Wiley Periodicals, Inc.

Spatial patterns of preconsolidation pressure and soil moisture along transects in two directions under coffee

Directory of Open Access Journals (Sweden)

Ivoney Gontijo

2011-08-01

Full Text Available Information on the spatial structure of soil physical and structural properties is needed to evaluate the soil quality. The purpose of this study was to investigate the spatial behavior of preconsolidation pressure and soil moisture in six transects, three selected along and three across coffee rows, at three different sites under different tillage management systems. The study was carried out on a farm, in Patrocinio, state of Minas Gerais, in the Southeast of Brazil (18 º 59 ' 15 '' S; 46 º 56 ' 47 '' W; 934 m asl. The soil type is a typic dystrophic Red Latosol (Acrustox and consists of 780 g kg-1 clay; 110 g kg-1 silt and 110 g kg-1 sand, with an average slope of 3 %. Undisturbed soil cores were sampled at a depth of 0.10-0.13 m, at three different points within the coffee plantation: (a from under the wheel track, where equipment used in farm operations passes; (b in - between tracks and (c under the coffee canopy. Six linear transects were established in the experimental area: three transects along and three across the coffee rows. This way, 161 samples were collected in the transect across the coffee rows, from the three locations, while 117 samples were collected in the direction along the row. The shortest sampling distance in the transect across the row was 4 m, and 0.5 m for the transect along the row. No clear patterns of the preconsolidation pressure values were observed in the 200 m transect. The results of the semivariograms for both variables indicated a high nugget value and short range for the studied parameters of all transects. A cyclic pattern of the parameters was observed for the across-rows transect. An inverse relationship between preconsolidation pressure and soil moisture was clearly observed in the samples from under the track, in both directions.

238 series isotopes at different soil depths and disequilibrium over various geology and soil classifications along transects in selected parts of Ireland

International Nuclear Information System (INIS)

McAulay, I.R.; Hayes, A.

1996-01-01

Sampling of soils was carried out along linear transects in selected regions of the country, a technique known as Transect Sampling. This was a controlled rather than a random sampling technique. The transects were located in regions which were previously known to contain high levels of the 226 Ra isotope, from the 238 U series. The soil sampling was carried out at selected sites along these transects. At each transect site, two different soil depths were examined and the soil samples collected were identified as the top and bottom soil samples. This transect data set, consisting of the isotope activity levels and the influencing variables transect geology and soil types, provided a data base for investigation. Comparisons were made between the soil isotope activity levels measured at different soil depths. An examination of the 238 U decay series showed the existence of disequilibrium. Relationships between the disequilibrium data and the associated geology and soil types were investigated. (author)

Log sampling methods and software for stand and landscape analyses.

Science.gov (United States)

Lisa J. Bate; Torolf R. Torgersen; Michael J. Wisdom; Edward O. Garton; Shawn C. Clabough

2008-01-01

We describe methods for efficient, accurate sampling of logs at landscape and stand scales to estimate density, total length, cover, volume, and weight. Our methods focus on optimizing the sampling effort by choosing an appropriate sampling method and transect length for specific forest conditions and objectives. Sampling methods include the line-intersect method and...

Mobile acoustic transects miss rare bat species: implications of survey method and spatio-temporal sampling for monitoring bats.

Science.gov (United States)

Braun de Torrez, Elizabeth C; Wallrichs, Megan A; Ober, Holly K; McCleery, Robert A

2017-01-01

Due to increasing threats facing bats, long-term monitoring protocols are needed to inform conservation strategies. Effective monitoring should be easily repeatable while capturing spatio-temporal variation. Mobile acoustic driving transect surveys ('mobile transects') have been touted as a robust, cost-effective method to monitor bats; however, it is not clear how well mobile transects represent dynamic bat communities, especially when used as the sole survey approach. To assist biologists who must select a single survey method due to resource limitations, we assessed the effectiveness of three acoustic survey methods at detecting species richness in a vast protected area (Everglades National Park): (1) mobile transects, (2) stationary surveys that were strategically located by sources of open water and (3) stationary surveys that were replicated spatially across the landscape. We found that mobile transects underrepresented bat species richness compared to stationary surveys across all major vegetation communities and in two distinct seasons (dry/cool and wet/warm). Most critically, mobile transects failed to detect three rare bat species, one of which is federally endangered. Spatially replicated stationary surveys did not estimate higher species richness than strategically located stationary surveys, but increased the rate at which species were detected in one vegetation community. The survey strategy that detected maximum species richness and the highest mean nightly species richness with minimal effort was a strategically located stationary detector in each of two major vegetation communities during the wet/warm season.

Relative spatial soil geochemical variability along two transects across the United States and Canada

Science.gov (United States)

Garrett, Robert G.

2009-01-01

To support the development of protocols for the proposed North American Soil Geochemical Landscapes project, whose objective is to establish baselines for the geochemistry of North American soils, two continental-scale transects across the United States and Canada were sampled in 2004. The sampling employed a spatially stratified random sampling design in order to estimate the variability between 40-km linear sampling units, within them, at sample sites, and due to sample preparation and analytical chemical procedures. The 40-km scale was chosen to be consistent with the density proposed for the continental-scale project. The two transects, north–south (N–S) from northern Manitoba to the USA–Mexico border near El Paso, Texas, and east–west (E–W) from the Virginia shore north of Washington, DC, to north of San Francisco, California, closely following the 38th parallel, have been studied individually. The purpose of this study was to determine if statistically significant systematic spatial variation occurred along the transects. Data for 38 major, minor and trace elements in A- and C-horizon soils where less than 5% of the data were below the detection limit were investigated by Analysis of Variance (ANOVA). A total of 15 elements (K, Na, As, Ba, Be, Ce, La, Mn, Nb, P, Rb, Sb, Th, Tl and W) demonstrated statistically significant (p<0.05) variability at the between-40-km scale for both horizons along both transects. Only Cu failed to demonstrate significant variability at the between-40-km scale for both soil horizons along both transects.

North European Transect

Science.gov (United States)

Korja, Annakaisa; Heikkinen, Pekka J.; Roslov, Yuri; Ivanova, Nina; Verba, Marc; Sakoulina, Tamara

2010-05-01

A nearly continuous, 3600 km long, NE-running North European Transect (NET) is combined from the existing deep seismic reflection data sets in the Baltic Sea (BABEL, 1600 km), Northern Finland (FIRE 4-4A, 580 km) and Barents Sea (1-AR, 1440 km;). The reflective image of the deep crust is highly dependent on the thickness of the sedimentary cover. The cover is few hundred meters in the Baltic sea, few tens of meters in the land areas and few kilometers in the Barents Sea area. In the Barents Sea area, the seismic image is dominated by the layered structure of the sedimentary basins and the middle and lower crust are poorly imaged. Therefore the Moho boundary in the Barents Sea has been determined from wide-angle reflections. Geologically the transect covers the transition from Phanerozoic Europe to Precambrian Europe and back to the Phanerozoic Barents Sea Shelf. It displays how Northern Europe grew around Baltica in several tectonic episodes involving the formation and destruction of Columbia/Hudsonland, Rodinia and Pangea supercontinents. The paleo plateboundaries are traversed by subvertical transparent zones suggesting transpressional and trantensional environments. The BABEL lines image how the core of Baltica was formed by sequential accretion of microcontinents and arc terranes at the old continental margin during the Svecofennian Orogeny ~1.9-1.8 Ga .When Baltica joined the Columbia supercontinent, new terranes were added to its southern edge in the Sveocbaltic Orogeny (~1.8 Ga). During the dispersal of the Columbia, the Baltic Sea failed rift was formed, rapakivi granitoids were intruded and sedimentary basins were developed. An extended plate margin structure has been imposed on the Rodinian (Sveconorwegian) and Pangean additions (Variscan-Caledonian). Major crustal thinning takes place along a series of subvertical faults across the Trans-European Suture Zone marking the transition from Phanerozoic to Proterozoic Europe. The FIRE lines in Northen Finland

Mobile acoustic transects miss rare bat species: implications of survey method and spatio-temporal sampling for monitoring bats

Directory of Open Access Journals (Sweden)

Elizabeth C. Braun de Torrez

2017-11-01

Full Text Available Due to increasing threats facing bats, long-term monitoring protocols are needed to inform conservation strategies. Effective monitoring should be easily repeatable while capturing spatio-temporal variation. Mobile acoustic driving transect surveys (‘mobile transects’ have been touted as a robust, cost-effective method to monitor bats; however, it is not clear how well mobile transects represent dynamic bat communities, especially when used as the sole survey approach. To assist biologists who must select a single survey method due to resource limitations, we assessed the effectiveness of three acoustic survey methods at detecting species richness in a vast protected area (Everglades National Park: (1 mobile transects, (2 stationary surveys that were strategically located by sources of open water and (3 stationary surveys that were replicated spatially across the landscape. We found that mobile transects underrepresented bat species richness compared to stationary surveys across all major vegetation communities and in two distinct seasons (dry/cool and wet/warm. Most critically, mobile transects failed to detect three rare bat species, one of which is federally endangered. Spatially replicated stationary surveys did not estimate higher species richness than strategically located stationary surveys, but increased the rate at which species were detected in one vegetation community. The survey strategy that detected maximum species richness and the highest mean nightly species richness with minimal effort was a strategically located stationary detector in each of two major vegetation communities during the wet/warm season.

Transmission of radioiodine through sampling lines

International Nuclear Information System (INIS)

Unrein, P.J.; Pelletier, C.A.; Cline, J.E.; Voilleque, P.G.

1985-01-01

An experimental program to measure radioiodine transmission through sampling lines is described. The transmission depends upon both deposition on and resuspension from the walls of the line. The deposition and resuspension processes are themselves controlled by the length, diameter, and material of the line and the conditions under which it is operated. The operating conditions under study are sampling flow rate, temperature and relative humidity. Measurement results have been interpreted in terms of a four-compartment model of radioiodine deposition and resuspension. The model is applied to each of twenty or more segments of the line. Experimental measurements of short-term transmission fractions and the deposition velocities derived from them are presented for six lines. Data on resuspension rates for the same lines were obtained and are also discussed

Cetacean line-transect survey conducted in the eastern Bering Sea shelf by Alaska Fisheries Science Center, National Marine Mammal Laboratory from NOAA Ship Miller Freeman from 1999-07-07 to 2004-06-30 (NCEI Accession 0131862)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Visual surveys for cetaceans were conducted on the eastern Bering Sea shelf along transect lines, in association with the AFSC’s echo integration trawl surveys for...

Summary evaluation of Yucca Mountain surface transects with implications for downhole sampling. Yucca Mountain Site Characterization Project

International Nuclear Information System (INIS)

Mckenna, S.A.; Rautman, C.A.

1995-06-01

The results of previously completed vertical outcrop sampling transacts are summarized with respect to planning downhole sampling. The summary includes statistical descriptions and descriptions of the spatial variability of the sampled parameters. Descriptions are made on each individual transect, each thermal/mechanical unit and each previously defined geohydrologic unit. Correlations between parameters indicate that saturated hydraulic conductivity is not globally correlated to porosity. The correlation between porosity and saturated hydraulic conductivity is both spatially and lithologically dependent. Currently, there are not enough saturated hydraulic conductivity and sorptivity data to define relationships between these properties and porosity on a unit by unit basis. Also, the Prow Pass member of the Crater Flat Tuff and stratigraphically lower units have gone essentially unsampled in these outcrop transacts. The vertical correlation length for hydrologic properties is not constant across the area of the transacts. The average sample spacing within the transacts ranges from 1.25 to 2.1 meters. It appears that, with the exception of the Topopah Spring member units, a comparable sample spacing will give adequate results in the downhole sampling campaign even with the nonstationarity of the vertical correlation. The properties within the thermal/mechanical units and geohydrologic units of the Topopah Spring member appear to have a spatial correlation range less than or equal to the current sample spacing within these units. For the downhole sampling, a sample spacing of less than 1.0 meters may be necessary within these units

A Unimodal Model for Double Observer Distance Sampling Surveys.

Directory of Open Access Journals (Sweden)

Earl F Becker

Full Text Available Distance sampling is a widely used method to estimate animal population size. Most distance sampling models utilize a monotonically decreasing detection function such as a half-normal. Recent advances in distance sampling modeling allow for the incorporation of covariates into the distance model, and the elimination of the assumption of perfect detection at some fixed distance (usually the transect line with the use of double-observer models. The assumption of full observer independence in the double-observer model is problematic, but can be addressed by using the point independence assumption which assumes there is one distance, the apex of the detection function, where the 2 observers are assumed independent. Aerially collected distance sampling data can have a unimodal shape and have been successfully modeled with a gamma detection function. Covariates in gamma detection models cause the apex of detection to shift depending upon covariate levels, making this model incompatible with the point independence assumption when using double-observer data. This paper reports a unimodal detection model based on a two-piece normal distribution that allows covariates, has only one apex, and is consistent with the point independence assumption when double-observer data are utilized. An aerial line-transect survey of black bears in Alaska illustrate how this method can be applied.

Transect width and missed observations in counting muskoxen (Ovibos moschatus from fixed-wing aircraft

Directory of Open Access Journals (Sweden)

P. Aastrup

1993-12-01

Full Text Available While conductioning muskox-censuses (Ovibos moschatus in winter in Jameson Land, NE Greenland, from a fixed-wing aircraft, we examined the width of transects covered. We used a laser range-finder binocular for measuring the distance to observed groups. We found that 1000 m was a reasonable limit for observing a high proportion of the muskoxen present even though it was possible to observe muskoxen from 4000 m or even more. Using two observers on the right side of the aircraft each speaking into a tape recorder with an automatic time signal, we recorded observations and performed a double-observer experiment. By matching the group sizes and perpendicular distances with times of observation we could compare observations of the two observers. We found that both observers missed up to 25% of muskoxen within a 2000 m transect width. The main reasons for missing animals is difficulty in obtaining reference points in snow covered landscape and fatigue of the observers. Calibration of estimated distances using read-outs from the laser-range finder is an adequate method of obtaining distance data for line transect calculations. Our double-observer experiment demonstrated that even groups close to the transect are easily missed.

Microplastic sampling in the Mediterranean Sea

DEFF Research Database (Denmark)

Biginagwa, Fares; Sosthenes, Bahati; Syberg, Kristian

The extent of microplastic pollution in the Southwestern Mediterranean Sea is not yet known, although on Northwestern part has been previously studied. Plastic samples were collected at 7 transects during a 10 day expedition from Sicily (Italy) to Malaga (Spain) in September 2014. A 330 µM mesh...... manta trawl was used for surface water sampling. Physical and chemical characterization of plastic particles was performed with regard to size (1-5mm), shape (fragment, line, thin film, foam and pellets), color (transparent, white, black and colored), density and chemical composition according...

Multidetector CT findings of bowel Transection in blunt abdominal trauma

International Nuclear Information System (INIS)

Cho, Hyun Suk; Woo, Ji Young; Hong, Hye Suk; Park, Mee Hyun; Yang, Ik; Lee, Yul; Jung, Ah Young; Hwang, Ji Young; Ha, Hong Il

2013-01-01

Though a number of CT findings of bowel and mesenteric injuries in blunt abdominal trauma are described in literature, no studies on the specific CT signs of a transected bowel have been published. In the present study we describe the incidence and new CT signs of bowel transection in blunt abdominal trauma. We investigated the incidence of bowel transection in 513 patients admitted for blunt abdominal trauma who underwent multidetector CT (MDCT). The MDCT findings of 8 patients with a surgically proven complete bowel transection were assessed retrospectively. We report novel CT signs that are unique for transection, such as complete cutoff sign (transection of bowel loop), Janus sign (abnormal dual bowel wall enhancement, both increased and decreased), and fecal spillage. The incidence of bowel transection in blunt abdominal trauma was 1.56%. In eight cases of bowel transection, percentage of CT signs unique for bowel transection were as follows: complete cutoff in 8 (100%), Janus sign in 6 (100%, excluding duodenal injury), and fecal spillage in 2 (25%). The combination of complete cutoff and Janus sign were highly specific findings in patients with bowel transection. Complete cut off and Janus sign are the unique CT findings to help detect bowel transection in blunt abdominal trauma and recognition of these findings enables an accurate and prompt diagnosis for emergency laparotomy leading to reduced mortality and morbidity.

Measure of pancreas transection and postoperative pancreatic fistula.

Science.gov (United States)

Takahashi, Shinichiro; Gotohda, Naoto; Kato, Yuichiro; Konishi, Masaru

2016-05-15

In pancreaticoduodenectomy (PD), a standard protocol for pancreas transection has not been established although the method of pancreas transection might be involved in the occurrence of postoperative pancreatic fistula (POPF). This study aimed to compare whether pancreas transection by ultrasonically activated shears (UAS) or that by scalpel contributed more to POPF development. A prospective database of 171 patients who underwent PD for periampullary tumor at National Cancer Center Hospital East between January 2010 and June 2013 was reviewed. Among the 171 patients, 93 patients with soft pancreas were specifically included in this study. Surgical results and background were compared between patients with pancreas transection by UAS and scalpel to evaluate the effectiveness of UAS on reducing POPF. Body mass index, main pancreatic duct diameter, or other clinicopathologic factors that have been reported as predictive factors for POPF were not significantly different between the two groups. The incidence of all grades of POPF and that of grade B were significantly lower in the scalpel group (52%, 4%) than in the UAS group (74%, 42%). Postoperative complications ≥ grade III were also significantly fewer in the scalpel group. Scalpel transection was less associated with POPF than UAS transection in patients who underwent PD for soft pancreas. The method of pancreas transection plays an important role in the prevention of clinical POPF. Copyright © 2016 Elsevier Inc. All rights reserved.

HASE - The Helsinki adaptive sample preparation line

Energy Technology Data Exchange (ETDEWEB)

Palonen, V., E-mail: vesa.palonen@helsinki.fi [Department of Physics, University of Helsinki, P.O. Box 43, FI-00014 (Finland); Pesonen, A. [Laboratory of Chronology, Finnish Museum of Natural History, P.O. Box 64, FI-00014 (Finland); Herranen, T.; Tikkanen, P. [Department of Physics, University of Helsinki, P.O. Box 43, FI-00014 (Finland); Oinonen, M. [Laboratory of Chronology, Finnish Museum of Natural History, P.O. Box 64, FI-00014 (Finland)

2013-01-15

We have designed and built an adaptive sample preparation line with separate modules for combustion, molecular sieve handling, CO{sub 2} gas cleaning, CO{sub 2} storage, and graphitization. The line is also connected to an elemental analyzer. Operation of the vacuum equipment, a flow controller, pressure sensors, ovens, and graphitization reactors are automated with a reliable NI-cRIO real-time system. Stepped combustion can be performed in two ovens at temperatures up to 900 Degree-Sign C. Depending on the application, CuO or O{sub 2}-flow combustion can be used. A flow controller is used to adjust the O{sub 2} flow and pressure during combustion. For environmental samples, a module for molecular sieve regeneration and sample desorption is attached to the line replacing the combustion module. In the storage module, CO{sub 2} samples can be stored behind a gas-tight diaphragm valve and either stored for later graphitization or taken for measurements with separate equipment (AMS gas ion source or a separate mass spectrometer). The graphitization module consists of four automated reactors, capable of graphitizing samples with masses from 3 mg down to 50 {mu}g.

Line Shape Variability in a Sample of AGN with Broad Lines

Indian Academy of Sciences (India)

2016-01-27

Jan 27, 2016 ... We give here a comparative review of the line shape variability in a sample of five type 1 AGNs, those with broad emission lines in their spectra, of the data obtained from the international long-term optical monitoring campaign coordinated by the Special Astrophysical Observatory of the Russian Academy ...

CRED REA Coral Population Parameters at Palmyra Atoll, Line Islands, 2004

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Belt transects along 2 consecutively-placed, 25m transect lines were surveyed as part of Rapid Ecological Assessments conducted at 9 sites at Palmyra Atoll in the...

Twenty-one years of mass balance observations along the K-transect, West Greenland

Directory of Open Access Journals (Sweden)

R. S. W. van de Wal

2012-08-01

Full Text Available A 21-yr record is presented of surface mass balance measurements along the K-transect. The series covers the period 1990–2011. Data are available at eight sites along a transect over an altitude range of 380–1850 m at approximately 67° N in West Greenland. The surface mass balance gradient is on average 3.8 × 10⁻³ m w.e. m⁻¹, and the mean equilibrium line altitude is 1553 m a.s.l. Only the lower three sites within 10 km of the margin up to an elevation of 700 m experience a significant increasing trend in the ablation over the entire period. Data are available at: doi:10.1594/PANGAEA.779181.

Smooth muscle adaptation after intestinal transection and resection.

Science.gov (United States)

Thompson, J S; Quigley, E M; Adrian, T E

1996-09-01

Changes in motor function occur in the intestinal remnant after intestinal resection. Smooth muscle adaptation also occurs, particularly after extensive resection. The time course of these changes and their interrelationship are unclear. Our aim was to evaluate changes in canine smooth muscle structure and function during intestinal adaptation after transection and resection. Twenty-five dogs underwent either transection (N = 10), 50% distal resection (N = 10), or 50% proximal resection (N = 5). Thickness and length of the circular (CM) and longitudinal (LM) muscle layers were measured four and 12 weeks after resection. In vitro length-tension properties and response to a cholinergic agonist were studied in mid-jejunum and mid-ileum. Transection alone caused increased CM length in the jejunum proximal to the transection but did not affect LM length or muscle thickness. A 50% resection resulted in increased length of CM throughout the intestine and thickening of CM and LM near the anastomosis. Active tension of jejunal CM increased transiently four weeks after resection. Active tension in jejunal LM was decreased 12 weeks after transection and resection. Sensitivity of CM to carbachol was similar after transection and resection. It is concluded that: (1) Structural adaptation of both circular and longitudinal muscle occurs after intestinal resection. (2) This process is influenced by the site of the intestinal remnant. (3) Only minor and transient changes occur in smooth muscle function after resection. (4) Factors other than muscle adaptation are likely involved in the changes in motor function seen following massive bowel resection.

On-line sample treatment - Capillary gas chromatography

NARCIS (Netherlands)

Goosens, EC; de Jong, D; de Jong, GJ; Brinkman, UAT

Sample pretreatment is often the bottleneck of a trace level analytical procedure. In order to increase performance, increasing attention is therefore being devoted to combining sample pretreatment on-line with the separation technique that has to be used. In the present review, a variety of

Major- and trace-element concentrations in soils from two continental-scale transects of the United States and Canada

Science.gov (United States)

Smith, David B.; Cannon, William F.; Woodruff, Laurel G.; Garrett, Robert G.; Klassen, Rodney; Kilburn, James E.; Horton, John D.; King, Harley D.; Goldhaber, Martin B.; Morrison, Jean M.

2005-01-01

This report contains major- and trace-element concentration data for soil samples collected from 265 sites along two continental-scale transects in North America. One of the transects extends from northern Manitoba to the United States-Mexico border near El Paso, Tex. and consists of 105 sites. The other transect approximately follows the 38th parallel from the Pacific coast of the United States near San Francisco, Calif., to the Atlantic coast along the Maryland shore and consists of 160 sites. Sampling sites were defined by first dividing each transect into approximately 40-km segments. For each segment, a 1-km-wide latitudinal strip was randomly selected; within each strip, a potential sample site was selected from the most representative landscape within the most common soil type. At one in four sites, duplicate samples were collected 10 meters apart to estimate local spatial variability. At each site, up to four separate soil samples were collected as follows: (1) material from 0-5 cm depth; (2) O horizon, if present; (3) a composite of the A horizon; and (4) C horizon. Each sample collected was analyzed for total major- and trace-element composition by the following methods: (1) inductively coupled plasmamass spectrometry (ICP-MS) and inductively coupled plasma-atomic emission spectrometry (ICPAES) for aluminum, antimony, arsenic, barium, beryllium, bismuth, cadmium, calcium, cerium, cesium, chromium, cobalt, copper, gallium, indium, iron, lanthanum, lead, lithium, magnesium, manganese, molybdenum, nickel, niobium, phosphorus, potassium, rubidium, scandium, silver, sodium, strontium, sulfur, tellurium, thallium, thorium, tin, titanium, tungsten, uranium, vanadium, yttrium, and zinc; (2) cold vapor- atomic absorption spectrometry for mercury; (3) hydride generation-atomic absorption spectrometry for antimony and selenium; (4) coulometric titration for carbonate carbon; and (5) combustion for total carbon and total sulfur.

Radioactive and electron microscope analysis of effluent monitor sample lines

International Nuclear Information System (INIS)

Kowalski, J.F.

1986-01-01

Effluent air sampling at nuclear power plant often leads to the question ''How representative is the sample of the effluent stream?'' Samples from radiation monitors are typically obtained at great distances from the sample nozzle because of high background concerns under postulated accidents. Sample line plateout during normal effluent sampling becomes the major concern. A US Nuclear Regulatory Commission inspection raised a concern that monitors were not collecting representative samples per ANSI standard N13.1. A comprehensive 2-yr study at Beaver Valley was performed during normal effluent releases in two phases: 1) weekly charcoal and glass fiber filter samples were analyzed for radioactivity for 6 months, and 2) nuclepore membrane filter samples were analyzed by electron microscope for 4- and 6-h periods. A specially designed test nozzle was directly inserted into an effluent stream for comparison with the radiation monitor samples. Particle behavior characteristics can be determined during effluent releases using a simple test probe. While particle plateout was the major purpose of the study, other particle behavior characteristics were evident and equally as important. Particle travel through long sample lines can also lead to (a) agglomeration or the coagulation of smaller particles to form larger ones, (b) particle splitting or fracturing upon impact with the sample line interior walls, and (c) resuspension of large particles in sample lines

Multifractal analyis of soil invertebrates along a transect under different land uses

Science.gov (United States)

Machado Siqueira, Glécio; Alves Silva, Raimunda; Vidal-Vázquez, Eva; Paz-González, Antonio

2017-04-01

Soil fauna play a central role in many essential ecosystem processes. Land use and management can have a dramatic effect upon soil invertebrate community. Indices based on soil invertebrates abundance and diversity are fundamental for soil quality assessment. Many soil properties and attributes have been shown to exhibit spatial variabilityThe aim of this study was to analyze the scaling heterogeneity of the soil invertebrate community sampled using pitfall traps across a transect. The field study was conducted at Mata Roma municipality, Maranhão State, Brazil. Transects were marked under seven different agricultural/forestry land uses (millet, soybean, maize, eucalyptus, pasture, secondary savannah and native savannah). Native vegetation was considered as a reference, whereas the agricultural fields showed a range of soil use intensities. Along these transects 130 pitfall per land use were installed. First, differences in community assemblages and composition under different land use systems were evaluated using classical indices. Then, the spatial distribution of soil fauna trapped by pitfall techniques, characterized through generalized dimension, Dq, and singularity spectra, f(α) - α, showed a well-defined multifractal structure. Differences in scaling heterogeneity and other multifractal characteristics were examined in relation to land use intensification.

A survey of the occurrence of Bacillus anthracis in North American soils over two long-range transects and within post-Katrina New Orleans

Science.gov (United States)

Griffin, Dale W.; Petrosky, Terry; Morman, Suzette A.; Luna, Vicki A.

2009-01-01

Soil samples were collected along a north-south transect extending from Manitoba, Canada, to the US-Mexico border near El Paso, Texas in 2004 (104 samples), a group of sites within New Orleans, Louisiana following Hurricane Katrina in 2005 (19 samples), and a Gulf Coast transect extending from Sulphur, Louisiana, to DeFuniak Springs, Florida, in 2007 (38 samples). Samples were collected from the top 40 cm of soil and were screened for the presence of total Bacillus species and Bacillus anthracis (anthrax), specifically using multiplex-polymerase chain reaction (PCR). Using an assay with a sensitivity of ~170 equivalent colony-forming units (CFU) g-1 field moist soil, the prevalence rate of Bacillus sp./B. anthracis in the north-south transect and the 2005 New Orleans post-Katrina sample set were 20/5% and 26/26%, respectively. Prevalence in the 2007 Gulf Coast sample set using an assay with a sensitivity of ~4 CFU g-1 of soil was 63/0%. Individual transect-set data indicate a positive relation between occurrences of species and soil moisture or soil constituents (i.e., Zn and Cu content). The 2005 New Orleans post-Katrina data indicated that B. anthracis is readily detectable in Gulf Coast soils following flood events. The data also indicated that occurrence, as it relates to soil chemistry, may be confounded by flood-induced dissemination of germinated cells and the mixing of soil constituents for short temporal periods following an event.

Ground and surface water quality along a dambo transect in Chihota smallholder farming area, Marondera district, Zimbabwe

Science.gov (United States)

Wuta, M.; Nyamadzawo, G.; Mlambo, J.; Nyamugafata, P.

2016-04-01

In many smallholder farms in sub-Saharan Africa dambos are used for grazing and crop production especially horticultural crops. Increased use of dambos especially for crop production can result in ground and surface water pollution. Ground and surface water quality along a dambo transect in Chihota, Zimbabwe, was investigated between October 2013 and February 2014. The transect was divided into; upland (control), dambo gardens (mid-slope) and the river (valley bottom). Water samples for quality assessment were collected in October 2013 (peak of dry season) and February 2014 (peak of rainy season). The collected water samples were analysed for pH, faecal coliforms, total nitrogen, electrical conductivity, total dissolved solids (TDS), and some selected nutrients (P, K, Ca, Mg, Na, Zn, and Cu). Water pH was 7.0, 6.4 and 6.1 for river water, garden and upland wells respectively. During the wet season total nitrogen (TN) concentrations were 233 mg/L for uplands, 242 mg/L for gardens and 141 mg/L for the river. During the dry season, TN concentrations were all below 20 mg/L, and were not significantly different among sampling stations along the dambo transect. Dry season faecal coliform units (fcu) were significantly different and were 37.2, 30.0 and 5.0 for upland wells, garden wells and river respectively. Wet season faecal coliforms were also significantly different and were 428.5, 258.0 and 479.4 fcu for upland wells, garden wells and river respectively. The other measured physico-chemical parameters also varied with sampling position along the transect. It was concluded that TN and fcu in sampled water varied with season and that wet season concentrations were significantly higher than dry season concentrations. High concentrations of faecal coliforms and total N during the wet season was attributed to increased water movement. Water from upland wells, garden wells and river was not suitable for human consumption according to WHO standards during both the dry and

Biomechanical implications of lumbar spinal ligament transection.

Science.gov (United States)

Von Forell, Gregory A; Bowden, Anton E

2014-11-01

Many lumbar spine surgeries either intentionally or inadvertently damage or transect spinal ligaments. The purpose of this work was to quantify the previously unknown biomechanical consequences of isolated spinal ligament transection on the remaining spinal ligaments (stress transfer), vertebrae (bone remodelling stimulus) and intervertebral discs (disc pressure) of the lumbar spine. A finite element model of the full lumbar spine was developed and validated against experimental data and tested in the primary modes of spinal motion in the intact condition. Once a ligament was removed, stress increased in the remaining spinal ligaments and changes occurred in vertebral strain energy, but disc pressure remained similar. All major biomechanical changes occurred at the same spinal level as the transected ligament, with minor changes at adjacent levels. This work demonstrates that iatrogenic damage to spinal ligaments disturbs the load sharing within the spinal ligament network and may induce significant clinically relevant changes in the spinal motion segment.

Spinal cord transection before scoliosis correction in myelomeningocele may improve bladder function

NARCIS (Netherlands)

Linthorst, Josephine I.; Veenboer, Paul W.; Dik, Pieter; Pruijs, Hans E. H.; Han, Sen K. S.; de Kort, Laetitia M. O.; de Jong, Tom P. V. M.

2014-01-01

In patients with myelomeningocele (MMC) and coexistent scoliosis, a spinal cord transection (SC-transection) is sometimes performed before scoliosis correction to prevent traction on the myelum after stretching the spinal column. Performing a SC-transection may have positive effects on bladder

Sampling design for long-term regional trends in marine rocky intertidal communities

Science.gov (United States)

Irvine, Gail V.; Shelley, Alice

2013-01-01

Probability-based designs reduce bias and allow inference of results to the pool of sites from which they were chosen. We developed and tested probability-based designs for monitoring marine rocky intertidal assemblages at Glacier Bay National Park and Preserve (GLBA), Alaska. A multilevel design was used that varied in scale and inference. The levels included aerial surveys, extensive sampling of 25 sites, and more intensive sampling of 6 sites. Aerial surveys of a subset of intertidal habitat indicated that the original target habitat of bedrock-dominated sites with slope ≤30° was rare. This unexpected finding illustrated one value of probability-based surveys and led to a shift in the target habitat type to include steeper, more mixed rocky habitat. Subsequently, we evaluated the statistical power of different sampling methods and sampling strategies to detect changes in the abundances of the predominant sessile intertidal taxa: barnacles Balanomorpha, the mussel Mytilus trossulus, and the rockweed Fucus distichus subsp. evanescens. There was greatest power to detect trends in Mytilus and lesser power for barnacles and Fucus. Because of its greater power, the extensive, coarse-grained sampling scheme was adopted in subsequent years over the intensive, fine-grained scheme. The sampling attributes that had the largest effects on power included sampling of “vertical” line transects (vs. horizontal line transects or quadrats) and increasing the number of sites. We also evaluated the power of several management-set parameters. Given equal sampling effort, sampling more sites fewer times had greater power. The information gained through intertidal monitoring is likely to be useful in assessing changes due to climate, including ocean acidification; invasive species; trampling effects; and oil spills.

Calibration of a degassing-emanation line for 222Rn determination in seawater samples

International Nuclear Information System (INIS)

Farias, Luciana Aparecida

2002-01-01

The purpose of this study is to calibrate a degassing-emanation line and to determine 222 Rn and 226 Ra activity concentrations in seawater samples. This methodology, also called Lucas method, consists in the extraction of radon (originally dissolved in seawater), collection of the gas in a liquid nitrogen cold trap and transfer from the trap to an alpha scintillation cell. Total extraction efficiencies of the 4 degassing-emanation systems were determined by measuring 226 Ra reference solutions. The efficiencies obtained for these 4 systems varied from 21 % to 62%. This work also presents preliminary results of a study carried out in a series of small embayements of Ubatuba, Sao Paulo State-Brazil: Flamengo Bay, Fortaleza Bay, Mar Virado Bay and Ubatuba Bay. Concentration of Rn in excess varied from 0,011 to 0,317 Bq/L for Flamengo Bay, from 0,009 to 0,130 Bq/L for Fortaleza Bay, from 0,018 to 0,050 Bq/L for Mar Virado Bay and from 0,004 to 0,120 Bq/L for Ubatuba Bay. The results obtained for the concentration of 222 Rn in excess in a transect at Flamengo Bay varied from 0,002 to 0,036 Bq/L. Higher concentrations of 222 Rn in excess were obtained in Flamengo Bay, Fortaleza Bay and Ubatuba bay. It was also observed that the concentration of 222 Rn in excess increases with depth, as expected. (author)

The transect method: a novel approach to on-farm welfare assessment of commercial turkeys.

Science.gov (United States)

Marchewka, Joanna; Estevez, Inma; Vezzoli, Giuseppe; Ferrante, Valentina; Makagon, Maja M

2015-01-01

Currently, no animal-based protocol for on-farm welfare assessment of commercial turkeys is available. The birds' size and flighty nature make obtaining a representative sample using traditional methods difficult. The transect walks (TW) approach provides a potential alternative for on-farm assessments of turkey welfare. We compared the TW approach with a traditional method, and data collected as the birds were moved out of the house during the load out process (L). Ten commercial 19- to 20-week-old Hybrid turkey flocks were evaluated (1 flock/house/farm). Half of the flocks were housed on farms deemed as "faring well" by the company, the other half were on "suboptimal" farms. Each house was subdivided longitudinally into 4 transects. Two observers walked the transects in random order, recording the total number of birds per transect that were immobile; lame; aggressive towards a mate; interacting with humans; with visible head, vent, or back wounds; engaging in mounting behaviors; small; featherless; dirty; sick; terminal; or dead. Flocks were re-evaluated on the same day using the individual sampling method (S), where randomly selected birds were scored as they took 10 steps. Flocks were re-assessed within 48 h of the transect evaluation, as birds were funneled out of the house during load out. Using ANOVAs we determined the effects of observers, method, management, and their interactions on proportions of turkeys per house within each category. Outcome parameters were not affected by management (P>0.05 for all) or observer (P>0.05 for most), but an assessment method effect was detected (P<0.05). S differed from the 2 other methods (P<0.05) for most parameters except aggression towards a mate, back wounds, dirty, sick, and vent wounds. Differences were not detected between data collected using TW and during L, except for dead (P=0.0007) and immobile (P=0.007). Results suggest that the TW method is a promising tool for on-farm turkey welfare assessment as it

Distance sampling methods and applications

CERN Document Server

Buckland, S T; Marques, T A; Oedekoven, C S

2015-01-01

In this book, the authors cover the basic methods and advances within distance sampling that are most valuable to practitioners and in ecology more broadly. This is the fourth book dedicated to distance sampling. In the decade since the last book published, there have been a number of new developments. The intervening years have also shown which advances are of most use. This self-contained book covers topics from the previous publications, while also including recent developments in method, software and application. Distance sampling refers to a suite of methods, including line and point transect sampling, in which animal density or abundance is estimated from a sample of distances to detected individuals. The book illustrates these methods through case studies; data sets and computer code are supplied to readers through the book’s accompanying website.  Some of the case studies use the software Distance, while others use R code. The book is in three parts.  The first part addresses basic methods, the ...

Tracing variability in the iodine isotopes and species along surface water transect from the North Sea to the Canary Islands

International Nuclear Information System (INIS)

Peng He; Ala Aldahan; Uppsala University, Uppsala; Xiaolin Hou; Chinese Academy of Sciences, Xi'an; Possnert, Goran

2016-01-01

A complete transect of surface water samples from the North Sea to the Canary Islands was collected during a continuous period in 2010. The samples were analyzed for total 129 I and 127 I isotopes and their iodide and iodate species. The results indicate a large variability in the total 129 I and its species along the transect, whereas less change and variation are observed for the total 127 I and its species. Transport of 129 I from the western English Channel via Biscay Bay is the main source of 129 I in the northeastern Atlantic Ocean. (author)

Pacific Equatorial Transect

OpenAIRE

Pälike, Heiko; Nishi, Hiroshi; Lyle, Mitch; Raffi, Isabella; Klaus, Adam; Gamage, Kusali

2009-01-01

Integrated Ocean Drilling Program Expedition 320/321, "Pacific Equatorial Age Transect" (Sites U1331–U1338), was designed to recover a continuous Cenozoic record of the paleoequatorial Pacific by coring above the paleoposition of the Equator at successive crustal ages on the Pacific plate. These sediments record the evolution of the paleoequatorial climate system throughout the Cenozoic. As we gained more information about the past movement of plates and when in Earth's history "critical" cli...

Oxygen consumption by hydrazine in long sample lines

International Nuclear Information System (INIS)

Chi, Lisheng; Turner, Carl-W.

2012-09-01

In nuclear power plants secondary side system dissolved oxygen concentration is a strictly controlled chemistry parameter intended to minimize corrosion and fouling of steam cycle components. Low dissolved oxygen concentration is maintained by a combination of mechanical de-aeration and chemical reaction. The dissolved oxygen concentration in feedwater is monitored by sampling systems to ensure it remains within station specification during operation. The sample lines in a nuclear power plant's sampling system can be from 5 to nearly 200 meters in length, resulting in sample residence times between the take-off point to the analyzer from a few seconds to several minutes, depending on the flow rate and the length of the sample line. For many chemical parameters the residence time is of no concern. For measurements of dissolved oxygen and hydrazine in the secondary coolant, however, for residence times longer than one minute, it is uncertain whether the sample is representative of conditions in the secondary coolant, especially for samples taken from locations where the temperature is well over 100 deg. C. To address this concern, a series of tests were conducted under both warm-up and power operation conditions, respectively, to investigate the effect of temperature, residence time, sample line length, surface area, hydrazine-to-oxygen ratio, and the concentrations of dissolved oxygen and hydrazine on the consumption of oxygen by hydrazine. The test results revealed that dissolved oxygen measurements in CANDU plants are underestimated to various degrees, depending on the sampling system operating conditions. Two distinct types of behaviours are observed for the oxygen removal rate: 1) the percentage removal of dissolved oxygen is invariant with time during the tests, and increases with increasing residence time in the test section, when the reaction between hydrazine and oxygen is better described by a homogenous reaction mechanism, and 2) the percentage oxygen

Do sampling methods differ in their utility for ecological monitoring? Comparison of line-point intercept, grid-point intercept, and ocular estimate methods

Science.gov (United States)

This study compared the utility of three sampling methods for ecological monitoring based on: interchangeability of data (rank correlations), precision (coefficient of variation), cost (minutes/transect), and potential of each method to generate multiple indicators. Species richness and foliar cover...

Suitability of the line intersect method for sampling hardwood logging residues

Science.gov (United States)

A. Jeff Martin

1976-01-01

The line intersect method of sampling logging residues was tested in Appalachian hardwoods and was found to provide unbiased estimates of the volume of residue in cubic feet per acre. Thirty-two chains of sample line were established on each of sixteen 1-acre plots on cutover areas in a variety of conditions. Estimates from these samples were then compared to actual...

Sample handling and transport for the Secure Automated Fabrication line

International Nuclear Information System (INIS)

Sherrell, D.L.; Jensen, J.D.; Genoway, G.G.; Togesen, H.J.

1983-06-01

A totally automated system is described which packages, transports, receives, and unpackages sintered plutonium/uranium oxide fuel pellet samples to support automated chemical analysis equipment for the Secure Automated Fabrication (SAF) line. Samples are transferred 100 meters from the fuel production line to a different floor of the facility where automatic determinations are made for purposes of process control and fuel quality certification. The system automatically records identification numbers, net weights sent and received, and all other pertinent information such as fuel lot number, sample point, date, and time of day

Gas hydrate drilling transect across northern Cascadia margin - IODP Expedition 311

Science.gov (United States)

Riedel, M.; Collett, T.; Malone, M.J.; Collett, T.S.; Mitchell, M.; Guerin, G.; Akiba, F.; Blanc-Valleron, M.; Ellis, M.; Hashimoto, Y.; Heuer, V.; Higashi, Y.; Holland, M.; Jackson, P.D.; Kaneko, M.; Kastner, M.; Kim, J.-H.; Kitajima, H.; Long, P.E.; Malinverno, A.; Myers, Gwen E.; Palekar, L.D.; Pohlman, J.; Schultheiss, P.; Teichert, B.; Torres, M.E.; Trehu, A.M.; Wang, Jingyuan; Worthmann, U.G.; Yoshioka, H.

2009-01-01

A transect of four sites (U1325, U1326, U1327 and U1329) across the northern Cascadia margin was established during Integrated Ocean Drilling Program Expedition 311 to study the occurrence and formation of gas hydrate in accretionary complexes. In addition to the transect sites, a fifth site (U1328) was established at a cold vent with active fluid flow. The four transect sites represent different typical geological environments of gas hydrate occurrence across the northern Cascadia margin from the earliest occurrence on the westernmost first accreted ridge (Site U1326) to the eastward limit of the gas hydrate occurrence in shallower water (Site U1329). Expedition 311 complements previous gas hydrate studies along the Cascadia accretionary complex, especially ODP Leg 146 and Leg 204 by extending the aperture of the transect sampled and introducing new tools to systematically quantify the gas hydrate content of the sediments. Among the most significant findings of the expedition was the occurrence of up to 20 m thick sand-rich turbidite intervals with gas hydrate concentrations locally exceeding 50% of the pore space at Sites U1326 and U1327. Moreover, these anomalous gas hydrate intervals occur at unexpectedly shallow depths of 50-120 metres below seafloor, which is the opposite of what was expected from previous models of gas hydrate formation in accretionary complexes, where gas hydrate was predicted to be more concentrated near the base of the gas hydrate stability zone just above the bottom-simulating reflector. Gas hydrate appears to be mainly concentrated in turbidite sand layers. During Expedition 311, the visual correlation of gas hydrate with sand layers was clearly and repeatedly documented, strongly supporting the importance of grain size in controlling gas hydrate occurrence. The results from the transect sites provide evidence for a structurally complex, lithology-controlled gas hydrate environment on the northern Cascadia margin. Local shallow

Composition and diversity of tree species in transects of location lowland evergreen forest of Ecuador

Directory of Open Access Journals (Sweden)

Jorge Caranqui A.

2015-09-01

Full Text Available The study was conducted in 9 transects 1000m2 of lowland evergreen forest, located in two locations on the coast and one in eastern Ecuador. It was to contribute to knowledge of the diversity and composition of woody plants over 10 cm diameter at breast height (DBH plus infer the state of conservation of forests based on the composition, the number of species, indices diversity and importance value (IV, found in 9 transects of 1000 m² of forest: 156 species, 107 genera and 39 families distributed in 9 transects, in each one the Simpson diversity index is of 0.92 to 0.95, in this case are diversity because all approaches 1. Most were found species aren´t present in all transects, the index value in each transect does not exceed 40%. Grouping transects match three locations exception made to transect 5 and 8 were conducted in disturbed sites, the most transects are intermediate disturbance that their high levels of diversity.

Beyond the transect: An alternative microchemical imaging method for fine scale analysis of trace elements in fish otoliths during early life

International Nuclear Information System (INIS)

McGowan, Nicole; Fowler, Ashley M.; Parkinson, Kerryn; Bishop, David P.; Ganio, Katherine; Doble, Philip A.; Booth, David J.; Hare, Dominic J.

2014-01-01

Microchemical analysis of otolith (calcified ‘ear stones’ used for balance and orientation) of fishes is an important tool for studying their environmental history and management. However, the spatial resolution achieved is often too coarse to examine short-term events occurring in early life. Current methods rely on single points or transects across the otolith surface, which may provide a limited view of elemental distributions, a matter that has not previously been investigated. Imaging by laser ablation-inductively coupled plasma-mass spectrometry (LA-ICP-MS) permits microchemical analyses of short-term events in early life with high (< 10 μm) resolution, two-dimensional (2D) visualization of elemental distributions. To demonstrate the potential of this method, we mapped the concentrations of Sr and Ba, two key trace elements, in a small number of juvenile otoliths of neon damselfish (Pomacentrus coelestis) using an 8 μm beam diameter (laser fluence of 13.8 ± 3.5 J cm −2 ). Quantification was performed using the established method by Longerich et al. (1996), which is applied to 2D imaging of a biological matrix here for the first time. Accuracy of > 97% was achieved using a multi-point non matrix-matched calibration of National Institute of Standards and Technology (NIST) 610 and 612 (trace elements in glass) using Longerich's calculation method against the matrix-matched standard FEBS-1 (powdered red snapper [Lutjanus campechanus] otolith). The spatial resolution achieved in the otolith corresponded to a time period of 2 ± 1 days during the larval phase, and 4 ± 1 days during the post-settlement juvenile phase. This method has the potential to improve interpretations of early life-history events at scales corresponding to specific events. While the images showed gradients in Sr and Ba across the larval settlement zone more clearly than single transects, the method proved sample homogeneity throughout the structure; demonstrating that 2D

Beyond the transect: An alternative microchemical imaging method for fine scale analysis of trace elements in fish otoliths during early life

Energy Technology Data Exchange (ETDEWEB)

McGowan, Nicole [Elemental Bio-imaging Facility, University of Technology, Sydney, New South Wales (Australia); CCFS ARC Centre of Excellence, Department of Earth and Planetary Sciences, Macquarie University, Sydney (Australia); Fowler, Ashley M.; Parkinson, Kerryn [Fish Ecology Laboratory, School of the Environment, University of Technology, Sydney, New South Wales (Australia); Bishop, David P. [Elemental Bio-imaging Facility, University of Technology, Sydney, New South Wales (Australia); Ganio, Katherine [Florey Department of Neuroscience and Mental Health, University of Melbourne, Victoria (Australia); Doble, Philip A. [Elemental Bio-imaging Facility, University of Technology, Sydney, New South Wales (Australia); Booth, David J. [Fish Ecology Laboratory, School of the Environment, University of Technology, Sydney, New South Wales (Australia); Hare, Dominic J., E-mail: dominic.hare@uts.edu.au [Elemental Bio-imaging Facility, University of Technology, Sydney, New South Wales (Australia); Florey Department of Neuroscience and Mental Health, University of Melbourne, Victoria (Australia)

2014-10-01

Microchemical analysis of otolith (calcified ‘ear stones’ used for balance and orientation) of fishes is an important tool for studying their environmental history and management. However, the spatial resolution achieved is often too coarse to examine short-term events occurring in early life. Current methods rely on single points or transects across the otolith surface, which may provide a limited view of elemental distributions, a matter that has not previously been investigated. Imaging by laser ablation-inductively coupled plasma-mass spectrometry (LA-ICP-MS) permits microchemical analyses of short-term events in early life with high (< 10 μm) resolution, two-dimensional (2D) visualization of elemental distributions. To demonstrate the potential of this method, we mapped the concentrations of Sr and Ba, two key trace elements, in a small number of juvenile otoliths of neon damselfish (Pomacentrus coelestis) using an 8 μm beam diameter (laser fluence of 13.8 ± 3.5 J cm{sup −2}). Quantification was performed using the established method by Longerich et al. (1996), which is applied to 2D imaging of a biological matrix here for the first time. Accuracy of > 97% was achieved using a multi-point non matrix-matched calibration of National Institute of Standards and Technology (NIST) 610 and 612 (trace elements in glass) using Longerich's calculation method against the matrix-matched standard FEBS-1 (powdered red snapper [Lutjanus campechanus] otolith). The spatial resolution achieved in the otolith corresponded to a time period of 2 ± 1 days during the larval phase, and 4 ± 1 days during the post-settlement juvenile phase. This method has the potential to improve interpretations of early life-history events at scales corresponding to specific events. While the images showed gradients in Sr and Ba across the larval settlement zone more clearly than single transects, the method proved sample homogeneity throughout the structure; demonstrating that 2D

Recovery of bimodal locomotion in the spinal-transected salamander, Pleurodeles waltlii.

Science.gov (United States)

Chevallier, Stéphanie; Landry, Marc; Nagy, Frédéric; Cabelguen, Jean-Marie

2004-10-01

Electromyographic (EMG) analysis was used to provide an assessment of the recovery of locomotion in spinal-transected adult salamanders (Pleurodeles waltlii). EMG recordings were performed during swimming and overground stepping in the same animal before and at various times (up to 500 days) after a mid-trunk spinalization. Two-three weeks after spinalization, locomotor EMG activity was limited to the forelimbs and the body rostral to the transection. Thereafter, there was a return of the locomotor EMG activity at progressively more caudal levels below the transection. The animals reached stable locomotor patterns 3-4 months post-transection. Several locomotor parameters (cycle duration, burst duration, burst proportion, intersegmental phase lag, interlimb coupling) measured at various recovery times after spinalization were compared with those in intact animals. These comparisons revealed transient and long-term alterations in the locomotor parameters both above and below the transection site. These alterations were much more pronounced for swimming than for stepping and revealed differences in adaptive plasticity between the two locomotor networks. Recovered locomotor activity was immediately abolished by retransection at the site of the original spinalization, suggesting that the spinal cord caudal to the transection was reinnervated by descending brain and/or propriospinal axons, and that this regeneration contributed to the restoration of locomotor activity. Anatomical studies conducted in parallel further demonstrated that some of the regenerated axons came from glutamatergic and serotoninergic immunoreactive cells within the reticular formation.

The distribution of mercury in a forest floor transect across the central United States

Science.gov (United States)

Charles H. (Hobie) Perry; Michael C. Amacher; William Cannon; Randall K. Kolka; Laurel Woodruff

2009-01-01

Mercury (Hg) stored in soil organic matter may be released when the forest floor is consumed by fire. Our objective is to document the spatial distribution of forest floor Hg for a transect crossing the central United States. Samples collected by the Forest Service, U.S. Department of Agriculture's Forest Inventory and Analysis Soil Quality Indicator were tested...

Problems with sampling desert tortoises: A simulation analysis based on field data

Science.gov (United States)

Freilich, J.E.; Camp, R.J.; Duda, J.J.; Karl, A.E.

2005-01-01

The desert tortoise (Gopherus agassizii) was listed as a U.S. threatened species in 1990 based largely on population declines inferred from mark-recapture surveys of 2.59-km2 (1-mi2) plots. Since then, several census methods have been proposed and tested, but all methods still pose logistical or statistical difficulties. We conducted computer simulations using actual tortoise location data from 2 1-mi2 plot surveys in southern California, USA, to identify strengths and weaknesses of current sampling strategies. We considered tortoise population estimates based on these plots as "truth" and then tested various sampling methods based on sampling smaller plots or transect lines passing through the mile squares. Data were analyzed using Schnabel's mark-recapture estimate and program CAPTURE. Experimental subsampling with replacement of the 1-mi2 data using 1-km2 and 0.25-km2 plot boundaries produced data sets of smaller plot sizes, which we compared to estimates from the 1-mi 2 plots. We also tested distance sampling by saturating a 1-mi 2 site with computer simulated transect lines, once again evaluating bias in density estimates. Subsampling estimates from 1-km2 plots did not differ significantly from the estimates derived at 1-mi2. The 0.25-km2 subsamples significantly overestimated population sizes, chiefly because too few recaptures were made. Distance sampling simulations were biased 80% of the time and had high coefficient of variation to density ratios. Furthermore, a prospective power analysis suggested limited ability to detect population declines as high as 50%. We concluded that poor performance and bias of both sampling procedures was driven by insufficient sample size, suggesting that all efforts must be directed to increasing numbers found in order to produce reliable results. Our results suggest that present methods may not be capable of accurately estimating desert tortoise populations.

Evaluating patterns of a white-band disease (WBD outbreak in Acropora palmata using spatial analysis: a comparison of transect and colony clustering.

Directory of Open Access Journals (Sweden)

Jennifer A Lentz

Full Text Available BACKGROUND: Despite being one of the first documented, there is little known of the causative agent or environmental stressors that promote white-band disease (WBD, a major disease of Caribbean Acropora palmata. Likewise, there is little known about the spatiality of outbreaks. We examined the spatial patterns of WBD during a 2004 outbreak at Buck Island Reef National Monument in the US Virgin Islands. METHODOLOGY/PRINCIPAL FINDINGS: Ripley's K statistic was used to measure spatial dependence of WBD across scales. Localized clusters of WBD were identified using the DMAP spatial filtering technique. Statistics were calculated for colony- (number of A. palmata colonies with and without WBD within each transect and transect-level (presence/absence of WBD within transects data to evaluate differences in spatial patterns at each resolution of coral sampling. The Ripley's K plots suggest WBD does cluster within the study area, and approached statistical significance (p = 0.1 at spatial scales of 1100 m or less. Comparisons of DMAP results suggest the transect-level overestimated the prevalence and spatial extent of the outbreak. In contrast, more realistic prevalence estimates and spatial patterns were found by weighting each transect by the number of individual A. palmata colonies with and without WBD. CONCLUSIONS: As the search for causation continues, surveillance and proper documentation of the spatial patterns may inform etiology, and at the same time assist reef managers in allocating resources to tracking the disease. Our results indicate that the spatial scale of data collected can drastically affect the calculation of prevalence and spatial distribution of WBD outbreaks. Specifically, we illustrate that higher resolution sampling resulted in more realistic disease estimates. This should assist in selecting appropriate sampling designs for future outbreak investigations. The spatial techniques used here can be used to facilitate other

Evaluating patterns of a white-band disease (WBD) outbreak in Acropora palmata using spatial analysis: a comparison of transect and colony clustering.

Science.gov (United States)

Lentz, Jennifer A; Blackburn, Jason K; Curtis, Andrew J

2011-01-01

Despite being one of the first documented, there is little known of the causative agent or environmental stressors that promote white-band disease (WBD), a major disease of Caribbean Acropora palmata. Likewise, there is little known about the spatiality of outbreaks. We examined the spatial patterns of WBD during a 2004 outbreak at Buck Island Reef National Monument in the US Virgin Islands. Ripley's K statistic was used to measure spatial dependence of WBD across scales. Localized clusters of WBD were identified using the DMAP spatial filtering technique. Statistics were calculated for colony- (number of A. palmata colonies with and without WBD within each transect) and transect-level (presence/absence of WBD within transects) data to evaluate differences in spatial patterns at each resolution of coral sampling. The Ripley's K plots suggest WBD does cluster within the study area, and approached statistical significance (p = 0.1) at spatial scales of 1100 m or less. Comparisons of DMAP results suggest the transect-level overestimated the prevalence and spatial extent of the outbreak. In contrast, more realistic prevalence estimates and spatial patterns were found by weighting each transect by the number of individual A. palmata colonies with and without WBD. As the search for causation continues, surveillance and proper documentation of the spatial patterns may inform etiology, and at the same time assist reef managers in allocating resources to tracking the disease. Our results indicate that the spatial scale of data collected can drastically affect the calculation of prevalence and spatial distribution of WBD outbreaks. Specifically, we illustrate that higher resolution sampling resulted in more realistic disease estimates. This should assist in selecting appropriate sampling designs for future outbreak investigations. The spatial techniques used here can be used to facilitate other coral disease studies, as well as, improve reef conservation and management.

Cross-continental comparison of the functional composition and carbon allocation of two altitudinal forest transects in Ecuador and Rwanda.

Science.gov (United States)

Verbeeck, Hans; Bauters, Marijn; Bruneel, Stijn; Demol, Miro; Taveirne, Cys; Van Der Heyden, Dries; Kearsley, Elizabeth; Cizungu, Landry; Boeckx, Pascal

2017-04-01

Tropical forests are key actors in the global carbon cycle. Predicting future responses of these forests to global change is challenging, but important for global climate models. However, our current understanding of such responses is limited, due to the complexity of forest ecosystems and the slow dynamics that inherently form these systems. Our understanding of ecosystem ecology and functioning could greatly benefit from experimental setups including strong environmental gradients in the tropics, as found on altitudinal transects. We setup two such transects in both South-America and Central Africa, focussing on shifts in carbon allocation, forest structure, nutrient cycling and functional composition. The Ecuadorian transect has 16 plots (40 by 40 m) and ranges from 400 to 3000 m.a.s.l., and the Rwandan transect has 20 plots (40 by 40 m) from 1500 to 3000 m.a.s.l. All plots were inventoried and canopy, litter and soil were extensively sampled. By a cross-continental comparison of both transects, we will gain insight in how different or alike both tropical forests biomes are in their responses, and how universal the observed altitudinal adaption mechanisms are. This could provide us with vital information of the ecological responses of both biomes to future global change scenarios. Additionally, comparison of nutrient shifts and trait-based functional composition allows us to compare the biogeochemical cycles of African and South-American tropical forests.

Evaluating hepatocellular carcinoma cell lines for tumour samples using within-sample relative expression orderings of genes.

Science.gov (United States)

Ao, Lu; Guo, You; Song, Xuekun; Guan, Qingzhou; Zheng, Weicheng; Zhang, Jiahui; Huang, Haiyan; Zou, Yi; Guo, Zheng; Wang, Xianlong

2017-11-01

Concerns are raised about the representativeness of cell lines for tumours due to the culture environment and misidentification. Liver is a major metastatic destination of many cancers, which might further confuse the origin of hepatocellular carcinoma cell lines. Therefore, it is of crucial importance to understand how well they can represent hepatocellular carcinoma. The HCC-specific gene pairs with highly stable relative expression orderings in more than 99% of hepatocellular carcinoma but with reversed relative expression orderings in at least 99% of one of the six types of cancer, colorectal carcinoma, breast carcinoma, non-small-cell lung cancer, gastric carcinoma, pancreatic carcinoma and ovarian carcinoma, were identified. With the simple majority rule, the HCC-specific relative expression orderings from comparisons with colorectal carcinoma and breast carcinoma could exactly discriminate primary hepatocellular carcinoma samples from both primary colorectal carcinoma and breast carcinoma samples. Especially, they correctly classified more than 90% of liver metastatic samples from colorectal carcinoma and breast carcinoma to their original tumours. Finally, using these HCC-specific relative expression orderings from comparisons with six cancer types, we identified eight of 24 hepatocellular carcinoma cell lines in the Cancer Cell Line Encyclopedia (Huh-7, Huh-1, HepG2, Hep3B, JHH-5, JHH-7, C3A and Alexander cells) that are highly representative of hepatocellular carcinoma. Evaluated with a REOs-based prognostic signature for hepatocellular carcinoma, all these eight cell lines showed the same metastatic properties of the high-risk metastatic hepatocellular carcinoma tissues. Caution should be taken for using hepatocellular carcinoma cell lines. Our results should be helpful to select proper hepatocellular carcinoma cell lines for biological experiments. © 2017 John Wiley & Sons A/S. Published by John Wiley & Sons Ltd.

Evaluation of Scat Deposition Transects versus Radio Telemetry for Developing a Species Distribution Model for a Rare Desert Carnivore, the Kit Fox.

Science.gov (United States)

Dempsey, Steven J; Gese, Eric M; Kluever, Bryan M; Lonsinger, Robert C; Waits, Lisette P

2015-01-01

Development and evaluation of noninvasive methods for monitoring species distribution and abundance is a growing area of ecological research. While noninvasive methods have the advantage of reduced risk of negative factors associated with capture, comparisons to methods using more traditional invasive sampling is lacking. Historically kit foxes (Vulpes macrotis) occupied the desert and semi-arid regions of southwestern North America. Once the most abundant carnivore in the Great Basin Desert of Utah, the species is now considered rare. In recent decades, attempts have been made to model the environmental variables influencing kit fox distribution. Using noninvasive scat deposition surveys for determination of kit fox presence, we modeled resource selection functions to predict kit fox distribution using three popular techniques (Maxent, fixed-effects, and mixed-effects generalized linear models) and compared these with similar models developed from invasive sampling (telemetry locations from radio-collared foxes). Resource selection functions were developed using a combination of landscape variables including elevation, slope, aspect, vegetation height, and soil type. All models were tested against subsequent scat collections as a method of model validation. We demonstrate the importance of comparing multiple model types for development of resource selection functions used to predict a species distribution, and evaluating the importance of environmental variables on species distribution. All models we examined showed a large effect of elevation on kit fox presence, followed by slope and vegetation height. However, the invasive sampling method (i.e., radio-telemetry) appeared to be better at determining resource selection, and therefore may be more robust in predicting kit fox distribution. In contrast, the distribution maps created from the noninvasive sampling (i.e., scat transects) were significantly different than the invasive method, thus scat transects may be

Meltwater retention in a transect across the Greenland ice sheet

DEFF Research Database (Denmark)

Bøggild, Carl Egede; Forsberg, René; Reeh, Niels

2005-01-01

by different physical mechanisms, their potential magnitude can be estimated, which has been done in a transect at 66 degrees N. Results show that SI declines from west to east and inversely correlates with accumulation. From the total retention capacity, theoretical lowest-runoff lines were determined......Meltwater retention by freezing is a highly climate-sensitive term in the mass budget since the cold content is directly controlled by winter climate, which is expected to change most in an anthropogenic-driven climate change. Meltwater released at the surface percolates into dry snow in a pattern...... with alternating horizontal and vertical water-flow directions, where the processes of pore refreezing (RF) (vertical flow) and superimposed ice (SI) formation (horizontal flow) occur. The flow cannot be forecasted and quantified when water first enters cold, dry snow. However, because the two processes are driven...

Paleo-Productivity across the Paleocene-Eocene Thermal Maximum, Walvis Ridge Transect (ODP Sites 1262, 1263, and 1266)

Science.gov (United States)

Chun, C. O.; Delaney, M. L.; Zachos, J. C.

2005-12-01

Walvis Ridge transect (Ocean Drilling Program (ODP) Leg 208) provides the first high-resolution depth-transect of deep-sea sediments recovered from the south Atlantic across the P/E boundary. A geographically restricted depth transect (~ 2.2 km, water depths between 2500 and 4770 m) allows us to constrain the surface waters by assuming marine productivity conditions in the overlying water column are similar across all sites. The sediment record will reveal variations for processes that are water-depth dependent. We use the geochemical tracers; biogenic barium, phosphorus, calcium carbonate, and the redox sensitive trace elements manganese and uranium, to reconstruct nutrient burial, paleoproductivity, and bottom water redox chemistry across the Paleocene-Eocene Thermal Maximum (PETM). We calculate our concentrations on a calcium carbonate-free basis to account for dilution by non-carbonate sediments. Trace metal enrichment factors (EFs) are calculated relative to bulk crustal averages. We chose three sites from the depth transect: the shallowest (Site 1263, 2717 m water depth), an intermediate site (Site 1266, 3798 m water depth), and the deepest site (Site 1262, 4755 m water depth). We sampled each site at a sample resolution of ~ 1-2 kyr for 5 m.y. centered at 55 Ma. Uranium EFs at the shallow site exhibits values ~ 5 pre-event and drop to values near crustal averages during and after the carbon isotope excursion (CIE). No dramatic changes in U EFs across the P/E boundary are recorded at the deep and intermediate sites. Mn EFs range between 2.9 -8.6 prior to the event across all three sites, suggesting an oxygenated depositional environment. At the boundary, Mn EFs drop to crustal averages at all sites, then gradually return to pre-event values, indicating more reducing environments during the CIE, a possible explanation for the benthic extinction event (BEE) observed across this transect. Ba excess and reactive phosphorus exhibit decreased concentrations during

Geological controls on soil parent material geochemistry along a northern Manitoba-North Dakota transect

Science.gov (United States)

Klassen, R.A.

2009-01-01

As a pilot study for mapping the geochemistry of North American soils, samples were collected along two continental transects extending east–west from Virginia to California, and north–south from northern Manitoba to the US–Mexican border and subjected to geochemical and mineralogical analyses. For the northern Manitoba–North Dakota segment of the north–south transect, X-ray diffraction analysis and bivariate relations indicate that geochemical properties of soil parent materials may be interpreted in terms of minerals derived from Shield and clastic sedimentary bedrock, and carbonate sedimentary bedrock terranes. The elements Cu, Zn, Ni, Cr and Ti occur primarily in silicate minerals decomposed by aqua regia, likely phyllosilicates, that preferentially concentrate in clay-sized fractions; Cr and Ti also occur in minerals decomposed only by stronger acid. Physical glacial processes affecting the distribution and concentration of carbonate minerals are significant controls on the variation of trace metal background concentrations.

Geological controls on soil parent material geochemistry along a northern Manitoba-North Dakota transect

International Nuclear Information System (INIS)

Klassen, R.A.

2009-01-01

As a pilot study for mapping the geochemistry of North American soils, samples were collected along two continental transects extending east-west from Virginia to California, and north-south from northern Manitoba to the US-Mexican border and subjected to geochemical and mineralogical analyses. For the northern Manitoba-North Dakota segment of the north-south transect, X-ray diffraction analysis and bivariate relations indicate that geochemical properties of soil parent materials may be interpreted in terms of minerals derived from Shield and clastic sedimentary bedrock, and carbonate sedimentary bedrock terranes. The elements Cu, Zn, Ni, Cr and Ti occur primarily in silicate minerals decomposed by aqua regia, likely phyllosilicates, that preferentially concentrate in clay-sized fractions; Cr and Ti also occur in minerals decomposed only by stronger acid. Physical glacial processes affecting the distribution and concentration of carbonate minerals are significant controls on the variation of trace metal background concentrations.

Preliminary clinical study on non-transecting anastomotic bulbomembranous urethroplasty.

Science.gov (United States)

Le, Wei; Li, Chao; Zhang, Jinfu; Wu, Denglong; Liu, Bo

2017-06-01

This study aims to investigate the effect of non-transecting anastomotic urethroplasty for treatment of posterior urethral stricture. A total of 23 patients with traumatic posterior urethral stricture were enrolled and then divided into two groups. In one group, 12 patients underwent non-transecting anastomotic urethroplasty. In the other group, 11 patients underwent conventional posterior urethra end-to-end anastomosis. The effect of operation was evaluated using the following parameters: the bleeding amount during operation, operation time, IIEF-5 scores after operation, maximum flow rate (Qmax), and rating scale of quality of life (QoL). The comparison between the conventional posterior urethra end-to-end anastomosis group and the non-transecting anastomotic urethroplasty group showed no significant difference with regard to average operation time. However, a significant difference was observed between the groups with regard to the bleeding amount during operation. The patients in the group of non-transecting anastomotic urethroplasty urinated smoothly after the removal of catheter. Meanwhile, one patient from the group of conventional posterior urethra end-to-end anastomosis had difficulty urinating after the removal of catheter. Furthermore, significant differences in the operation time, bleeding amount during operation, IIEF-5 scores after operation, and rating scale of QoL were observed, whereas no significant difference was observed between urine flow rates of the two groups after operation. Overall, nontransecting anastomotic urethroplasty is effective for posterior urethra reconstruction, and it can reduce the occurrence rate of erectile dysfunction after operation.

Dynamics of vegetation and soils of oak/saw palmetto scrub after fire: Observations from permanent transects

Science.gov (United States)

Schmalzer, Paul A.; Hinkle, G. Ross

1991-01-01

Ten permanent 15 m transects previously established in two oak/saw palmetto scrub stands burned in December 1986, while two transects remained unburned. Vegetation in the greater than 0.5 m and the less than 0.5 m layers on these transects was sampled at 6, 12, 18, 24, and 36 months postburn and determined structural features of the vegetation (height, percent bare ground, total cover). The vegetation data were analyzed from each sampling by height layer using detrended correspondence analysis ordination. Vegetation data for the greater than 0.5 m layer for the entire time sequence were combined and analyzed using detrended correspondence analysis ordination. Soils were sampled at 6, 12, 18, and 24 months postburn and analyzed for pH, conductivity, organic matter, exchangeable cations (Ca, Mg, K, Na), NO3-N, NH4-N, Al, available metals (Cu, Fe, Mn, Zn), and PO4-P. Shrub species recovered at different rates postfire with saw palmetto reestablishing cover greater than 0.5 m within one year, but the scrub oaks had not returned to preburn cover greater than 0.5 m in 3 years after the fire. These differences in growth rates resulted in dominance shifts after the fire with saw palmetto increasing relative to the scrub oaks. Overall changes in species richness were minor, although changes occurred in species richness by height layers due to different growth rates. Soils of well drained and poorly drained sites differed markedly. Soil responses to the fire appeared minor. Soil pH increased at 6 and 12 months postfire; calcium increased at 6 months postburn. Nitrate-nitrogen increased at 12 months postburn. Low values of conductivity, PO4-P, Mg, K, Na, and Fe at 12 months postburn may be related to heavy rainfall the preceding month. Seasonal variability in some soil parameters appeared to occur.

Duodenal Transection without Pancreatic Injury following Blunt ...

African Journals Online (AJOL)

following blunt abdominal trauma and its clinical picture is often ... Here we report a case of complete duodenal ... Key words: Duodenal injury, peritonitis, transection. Department of ... When our patient was brought to the emergency room, he.

Environment, vegetation and greenness (NDVI) along the North America and Eurasia Arctic transects

International Nuclear Information System (INIS)

Walker, D A; Raynolds, M K; Kuss, P; Kade, A N; Epstein, H E; Frost, G V; Kopecky, M A; Daniëls, F J A; Leibman, M O; Moskalenko, N G; Khomutov, A V; Matyshak, G V; Khitun, O V; Forbes, B C; Bhatt, U S; Vonlanthen, C M; Tichý, L

2012-01-01

Satellite-based measurements of the normalized difference vegetation index (NDVI; an index of vegetation greenness and photosynthetic capacity) indicate that tundra environments are generally greening and becoming more productive as climates warm in the Arctic. The greening, however, varies and is even negative in some parts of the Arctic. To help interpret the space-based observations, the International Polar Year (IPY) Greening of the Arctic project conducted ground-based surveys along two >1500 km transects that span all five Arctic bioclimate subzones. Here we summarize the climate, soil, vegetation, biomass, and spectral information collected from the North America Arctic transect (NAAT), which has a more continental climate, and the Eurasia Arctic transect (EAT), which has a more oceanic climate. The transects have broadly similar summer temperature regimes and overall vegetation physiognomy, but strong differences in precipitation, especially winter precipitation, soil texture and pH, disturbance regimes, and plant species composition and structure. The results indicate that summer warmth and NDVI increased more strongly along the more continental transect. (letter)

Tracing variability in the iodine isotopes and species along surface water transect from the North Sea to the Canary Islands

DEFF Research Database (Denmark)

He, Peng; Aldahan, Ala; Hou, Xiaolin

2016-01-01

A complete transect of surface water samples from the North Sea to the Canary Islands was collected during a continuous period in 2010. The samples were analyzed for total 129I and 127I isotopes and their iodide and iodate species. The results indicate a large variability in the total 129I and its...

Motor Axonal Regeneration After Partial and Complete Spinal Cord Transection

Science.gov (United States)

Lu, Paul; Blesch, Armin; Graham, Lori; Wang, Yaozhi; Samara, Ramsey; Banos, Karla; Haringer, Verena; Havton, Leif; Weishaupt, Nina; Bennett, David; Fouad, Karim; Tuszynski, Mark H.

2012-01-01

We subjected rats to either partial mid-cervical or complete upper thoracic spinal cord transections and examined whether combinatorial treatments support motor axonal regeneration into and beyond the lesion. Subjects received cAMP injections into brainstem reticular motor neurons to stimulate their endogenous growth state, bone marrow stromal cell grafts in lesion sites to provide permissive matrices for axonal growth, and brain-derived neurotrophic factor (BDNF) gradients beyond the lesion to stimulate distal growth of motor axons. Findings were compared to several control groups. Combinatorial treatment generated motor axon regeneration beyond both C5 hemisection and complete transection sites. Yet despite formation of synapses with neurons below the lesion, motor outcomes worsened after partial cervical lesions and spasticity worsened after complete transection. These findings highlight the complexity of spinal cord repair, and the need for additional control and shaping of axonal regeneration. PMID:22699902

Chemical element concentrations in four lichens on a transect entering Voyageurs National Park

Science.gov (United States)

Bennett, J.; Wetmore, C.M.

1997-01-01

A three factor transect study was conducted to test the hypothesis that chemical elements from air emissions in the vicinity of International Falls, Minnesota could not be detected in lichens along a 24 km transect reaching into Voyageurs National Park. It was hypothesized that element concentrations in lichens would decline exponentially downwind and would reach background values at a distance before the park boundary. Four species (Cladina rangiferina, Evernia mesomorpha, Hypogymnia physodes, and Parmelia sulcata) were sampled at ten sites for 3 years and 17 chemical elements were measured. The most notable result was a curvilinear geographic trend for many elements, which decreased from International Falls and then increased towards the park. This trend was significant for many anthropogenic elements, including S, Hg, Cd, and Cr, and for all four species. This type of distribution pattern has been observed in Hypogymnia physodes in other studies downwind of a steel mill and an oil refinery. Cladina, a ground-dwelling lichen, generally had lower tissue concentrations of the elements than the three epiphytic species. Tissue concentrations over the 3 years of sampling declined an average of 12%. Sufficient evidence exists to conclude that lichen tissue element concentrations in the vicinity of International Falls may be related to local air emissions, and that an exponential decline of element concentrations downwind of the sources does not apply to this situation.

Non-transecting anastomotic urethroplasty (surgical atlas

Directory of Open Access Journals (Sweden)

S. V. Kotov

2015-01-01

Full Text Available Non-transecting anastomotic urethroplasty – is three types of urethroplasty, which are united on the principle resection of bulbar urethra with sparing of corpus spongiosum and antegrade blood flow through it. The article describes the surgical technique of urethroplasty: dorsal strictureplasty by Heineke–Mikulicz; strictureplasty by Mundy; vessel-sparing anastomotic urethroplasty by Jordan. Obligatory conditions of the non-transecting anastomotic urethroplasty are a non traumatic etiology, length of the stricture not more than 1–1.5 cm, and its localization in the proximal bulbar urethra. Strictureplasty by Heineke–Mikulicz is a dorsal longitudinal incision of the urethra on the area of stricture and subsequent suturing the defect transversely. Strictureplasty by Mundy is a dorsal longitudinal urethrotomy, excision of the affected mucosa inside the lumen of the urethra and transversely urethral closure according to Heineke–Mikulicz, s principle. Vessel-sparing anastomotic urethroplasty by Jordan is circular excision of the urethral mucosa without crossing of corpus spongiosum and incoming into it bulbar arteries and thereby preserving the antegrade blood flow through the urethra.

A chronology for glacial Lake Agassiz shorelines along Upham's namesake transect

Science.gov (United States)

Lepper, Kenneth; Buell, Alex W.; Fisher, Timothy G.; Lowell, Thomas V.

2013-07-01

Four traditionally recognized strandline complexes in the southern basin of glacial Lake Agassiz are the Herman, Norcross, Tintah and Campbell, whose names correspond to towns in west-central Minnesota that lie on a linear transect defined by the Great Northern railroad grade; the active corridor for commerce at the time when Warren Upham was mapping and naming the shorelines of Lake Agassiz (ca.1880-1895). Because shorelines represent static water planes, their extension around the lake margin establishes time-synchronous lake levels. Transitions between shoreline positions represent significant water-level fluctuations. However, geologic ages have never been obtained from sites near the namesake towns in the vicinity of the southern outlet. Here we report the first geologic ages for Lake Agassiz shorelines obtained at field sites along the namesake transect, and evaluate the emerging chronology in light of other paleoclimate records. Our current work from 11 sampling sites has yielded 16 independent ages. These results combined with a growing OSL age data set for Lake Agassiz's southern basin provide robust age constraints for the Herman, Norcross and Campbell strandlines with averages and standard deviations of 14.1 ± 0.3 ka, 13.6 ± 0.2 ka, and 10.5 ± 0.3 ka, respectively.

Non-transecting bulbar urethroplasty using buccal mucosa

African Journals Online (AJOL)

S. Bugeja

S. Ivaz, A.V. Frost, D.E. Andrich, A.R. Mundy. University College London Hospital, Reconstructive Urology Unit, UK. Received 6 September 2015; accepted 30 September 2015. Available online 2 December 2015. KEYWORDS. Urethral stricture;. Bulbar urethroplasty;. Non-transecting;. Buccal mucosal graft. Abstract.

Image-guided ureteral reconstruction using rendezvous technique for complex ureteric transection after gunshot injuries.

Science.gov (United States)

Arabi, Mohammad; Mat'hami, Abdulaziz; Said, Mohammad T; Bulbul, Muhammad; Haddad, Maurice; Al-Kutoubi, Aghiad

2016-01-01

Management of complex ureteric transection poses a significant clinical challenge, particularly after gunshot injuries due to marked distortion of anatomy and associated tissue loss. We report two cases of total ureteric transection due to gunshot injury successfully repaired using fluoroscopy-guided rendezvous procedure and double J stent placement. This minimally invasive approach may offer a safe and effective technique to repair complete ureteral transection and obviate the need for complex surgical procedures.

Mercury distribution and transport in the North Atlantic Ocean along the GEOTRACES-GA01 transect

Science.gov (United States)

Cossa, Daniel; Heimbürger, Lars-Eric; Pérez, Fiz F.; García-Ibáñez, Maribel I.; Sonke, Jeroen E.; Planquette, Hélène; Lherminier, Pascale; Boutorh, Julia; Cheize, Marie; Lukas Menzel Barraqueta, Jan; Shelley, Rachel; Sarthou, Géraldine

2018-04-01

We report here the results of total mercury (HgT) determinations along the 2014 Geotraces Geovide cruise (GA01 transect) in the North Atlantic Ocean (NA) from Lisbon (Portugal) to the coast of Labrador (Canada). HgT concentrations in unfiltered samples (HgTUNF) were log-normally distributed and ranged between 0.16 and 1.54 pmol L-1, with a geometric mean of 0.51 pmol L-1 for the 535 samples analysed. The dissolved fraction (waters. The HgTUNF concentrations were similarly low in the subpolar gyre waters ( ˜ 0.45 pmol L-1), whereas they exceeded 0.60 pmol L-1 in the subtropical gyre waters. The HgTUNF distribution mirrored that of dissolved oxygen concentration, with highest concentration levels associated with oxygen-depleted zones. The relationship between HgTF and the apparent oxygen utilization confirms the nutrient-like behaviour of Hg in the NA. An extended optimum multiparameter analysis allowed us to characterize HgTUNF concentrations in the different source water types (SWTs) present along the transect. The distribution pattern of HgTUNF, modelled by the mixing of SWTs, show Hg enrichment in Mediterranean waters and North East Atlantic Deep Water and low concentrations in young waters formed in the subpolar gyre and Nordic seas. The change in anthropogenic Hg concentrations in the Labrador Sea Water during its eastward journey suggests a continuous decrease in Hg content in this water mass over the last decades. Calculation of the water transport driven by the Atlantic Meridional Overturning Circulation across the Portugal-Greenland transect indicates northward Hg transport within the upper limb and southward Hg transport within the lower limb, with resulting net northward transport of about 97.2 kmol yr-1.

Transection of the innominate artery for tracheomalacia caused by persistent opisthotonus.

Science.gov (United States)

Tsugawa, Chikara; Ono, Yasuyuki; Nishijima, Eiji; Takamizawa, Shigeru; Satoh, Shiiki; Muraji, Toshihiro

2004-01-01

Patients with cerebral palsy often develop opisthotonus. The trachea may be pinched between the innominate artery and the cervical spine. This compartmentalized thoracic inlet results in severe tracheomalacia. We successfully released tracheal compression by transection of the innominate artery. In case 1, a 4-year-old girl with cerebral palsy and opisthotonus was admitted due to respiratory distress. Bronchoscopy revealed severe tracheomalacia 2 cm above the carina. An endotracheal stent was placed through a tracheostomy. Two months later, she developed tracheal bleeding and bronchoscopy demonstrated a trachea-innominate artery fistula. Magnetic resonance brain angiography showed the presence of Willis' circle, and transection of the innominate artery was justified. This was done through a low cervical skin incision. In case 2, a 6-year-old boy with cerebral palsy and opisthotonus had long-standing respiratory distress. Ventilatory support did not resolve the symptoms. The innominate artery was transected in the same fashion as in the first case. Case 1 has been free from respiratory distress for 4 months and case 2 for 3 years. Our experience suggests that the combination of tracheomalacia, opisthotonus causes severe respiratory distress. Transection of the innominate artery is a useful therapeutic strategy to release airway obstruction in this condition.

Potential of Gdgts as Temperature Proxies Along Altitudinal Transects in East Africa

Science.gov (United States)

Coffinet, Sarah; Huguet, Arnaud; Omuombo, Christine; Williamson, David; Fosse, Céline; Anquetil, Christine; Derenne, Sylvie

2014-05-01

Glycerol dialkyl glycerol tetraethers (GDGTs) are lipids of high molecular weight and include the isoprenoid GDGTs (iGDGTs) produced by Archaea and the branched GDGTs (brGDGTs) produced by unknown bacteria. Several indices were developed to describe the relationship between GDGT distribution and environmental parameters: the TEX86 (tetraether index of tetraethers consisting of 86 carbons), based on the relative abundances of iGDGTs in sediments, and the MBT (methylation index of branched tetraethers) and CBT (cyclisation ratio of branched tetraethers), based on the relative abundance of brGDGTs in soils. The TEX86 was shown to correlate well with water surface temperature, and the MBT and CBT with mean annual air temperature (MAAT) and soil pH. The GDGTs are increasingly used as temperature proxies. In this study, 41 surface soils were sampled along two altitudinal transects, from 500 to 2800 meters in Mount Rungwe (South western, Tanzania) and from 1897 to 3268 meters in Mount Kenya (Central Kenya). MAAT was reconstructed along the two transects using the MBT/CBT proxies. A linear correlation between the MBT/CBT-derived temperatures and the altitude (R2=0.83) was obtained by combining results of the two transects. The reconstructed temperature lapse rate (0.5 ° C/100 m) was consistent with the one determined from temperature measurements at six altitudes. These results show that the MBT/CBT is a suitable and robust temperature proxy in East Africa. In Mt. Rungwe soil samples, the TEX86 index, which was mainly used to reconstruct water surface temperatures until now, was found to vary linearly with altitude (R2=0.50). Such a relationship between TEX86 and altitude in organic soils has also been recently noticed in Mt. Xiangpi, China (Liu et al., 2013; R2=0.68). The adiabatic cooling of air with altitude could explain the TEX86 variation with altitude. If such a relationship is confirmed, the use of the TEX86 as a temperature proxy could be extended to soil

Phytoplankton, Bacteria and Heterotrophic Nanoflagellate studies using ship and OCM-2 data along a coastal transect in the Arabian Sea

Digital Repository Service at National Institute of Oceanography (India)

Matondkar, S.G.P.; Basu, S.; Parab, S.G.; Pednekar, S.; Niyati Hede, N.; Dwivedi, R.M.; Raman, M.; Babu, K.N.; Shukla, A; Shirdhankar, M.M.

by the riverine discharge of fresh-water. The impacts of fresh-water on the components of the food chain were studied. A total of 40 stations distributed over 3 transects were sampled off the coast of Goa, off Ratnagiri and off Dabhol. Physical conditions like...

Effects of spinal transection on presynaptic markers for glutamatergic neurons in the rat

International Nuclear Information System (INIS)

Singer, H.S.; Coyle, J.T.; Frangia, J.; Price, D.L.

1981-01-01

To evaluate the hypothesis that glutamic acid may be the neurotransmitter of descending, excitatory supraspinal pathways, the uptake and release of L-[3H] glutamate and the levels of endogenous glutamate were measured in preparations from rat lumbar spinal cord following complete mid-thoracic transection. Following transection, the activity of the synaptosomal high-affinity glutamate uptake process was increased in both dorsal and ventral halves of lumbar cord between 1 and 14 days after transection and returned to control levels by 21 days posttransection. At 7 days, the increased activity of the uptake process for L-[3H]glutamate resulted in elevation of Vmax with no significant alteration in KT as compared to age-matched controls. Depolarization-induced release of L-[3H]glutamate from prelabeled slices did not differ significantly from control in the lesioned rat except at 21 days after lesion when the amount of tritium release was significantly greater in the transected preparations than in control. Amino acid analysis of the lumbar cord from control and transected rats indicated only a 10% decrease in the level of endogenous glutamate and no alterations in the concentration of GABA and glycine 7 days after lesion. These findings do not support the hypothesis that glutamate serves as a major excitatory neurotransmitter in supraspinal pathways innervating the lumbar cord of the rat

Shrinkage of ipsilateral taste buds and hyperplasia of contralateral taste buds following chorda tympani nerve transection.

Science.gov (United States)

Li, Yi-Ke; Yang, Juan-Mei; Huang, Yi-Bo; Ren, Dong-Dong; Chi, Fang-Lu

2015-06-01

The morphological changes that occur in the taste buds after denervation are not well understood in rats, especially in the contralateral tongue epithelium. In this study, we investigated the time course of morphological changes in the taste buds following unilateral nerve transection. The role of the trigeminal component of the lingual nerve in maintaining the structural integrity of the taste buds was also examined. Twenty-four Sprague-Dawley rats were randomly divided into three groups: control, unilateral chorda tympani nerve transection and unilateral chorda tympani nerve transection + lingual nerve transection. Rats were allowed up to 42 days of recovery before being euthanized. The taste buds were visualized using a cytokeratin 8 antibody. Taste bud counts, volumes and taste receptor cell numbers were quantified and compared among groups. No significant difference was detected between the chorda tympani nerve transection and chorda tympani nerve transection + lingual nerve transection groups. Taste bud counts, volumes and taste receptor cell numbers on the ipsilateral side all decreased significantly compared with control. On the contralateral side, the number of taste buds remained unchanged over time, but they were larger, and taste receptor cells were more numerous postoperatively. There was no evidence for a role of the trigeminal branch of the lingual nerve in maintaining the structural integrity of the anterior taste buds.

Shrinkage of ipsilateral taste buds and hyperplasia of contralateral taste buds following chorda tympani nerve transection

Directory of Open Access Journals (Sweden)

Yi-ke Li

2015-01-01

Full Text Available The morphological changes that occur in the taste buds after denervation are not well understood in rats, especially in the contralateral tongue epithelium. In this study, we investigated the time course of morphological changes in the taste buds following unilateral nerve transection. The role of the trigeminal component of the lingual nerve in maintaining the structural integrity of the taste buds was also examined. Twenty-four Sprague-Dawley rats were randomly divided into three groups: control, unilateral chorda tympani nerve transection and unilateral chorda tympani nerve transection + lingual nerve transection. Rats were allowed up to 42 days of recovery before being euthanized. The taste buds were visualized using a cytokeratin 8 antibody. Taste bud counts, volumes and taste receptor cell numbers were quantified and compared among groups. No significant difference was detected between the chorda tympani nerve transection and chorda tympani nerve transection + lingual nerve transection groups. Taste bud counts, volumes and taste receptor cell numbers on the ipsilateral side all decreased significantly compared with control. On the contralateral side, the number of taste buds remained unchanged over time, but they were larger, and taste receptor cells were more numerous postoperatively. There was no evidence for a role of the trigeminal branch of the lingual nerve in maintaining the structural integrity of the anterior taste buds.

A line-based vegetation sampling technique and its application in ...

African Journals Online (AJOL)

percentage cover, density and intercept frequency) and also provides plant size distributions, yet requires no more sampling effort than the line-intercept method.. A field test of the three techniques in succulent karoo, showed that the discriminating ...

Proximity effects of high voltage electric power transmission lines on ...

African Journals Online (AJOL)

The proximity effects of high voltage electric power transmission lines on Leyland Cypress (xCupressocyparis leylandii (Dallim. and A.B. Jacks.) Dallim) and Japanese Privet (Ligustrum japonicum Thunb.) growth were examined in a private nursery located in Sakarya, Turkey. Five transect were randomly chosen in both ...

Mercury distribution and transport in the North Atlantic Ocean along the GEOTRACES-GA01 transect

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D. Cossa

2018-04-01

Full Text Available We report here the results of total mercury (HgT determinations along the 2014 Geotraces Geovide cruise (GA01 transect in the North Atlantic Ocean (NA from Lisbon (Portugal to the coast of Labrador (Canada. HgT concentrations in unfiltered samples (HgTUNF were log-normally distributed and ranged between 0.16 and 1.54 pmol L−1, with a geometric mean of 0.51 pmol L−1 for the 535 samples analysed. The dissolved fraction (< 0.45 µm of HgT (HgTF, determined on 141 samples, averaged 78 % of the HgTUNF for the entire data set, 84 % for open seawaters (below 100 m and 91 % if the Labrador Sea data are excluded, where the primary production was high (with a winter convection down to 1400 m. HgTUNF concentrations increased eastwards and with depth from Greenland to Europe and from subsurface to bottom waters. The HgTUNF concentrations were similarly low in the subpolar gyre waters ( ∼  0.45 pmol L−1, whereas they exceeded 0.60 pmol L−1 in the subtropical gyre waters. The HgTUNF distribution mirrored that of dissolved oxygen concentration, with highest concentration levels associated with oxygen-depleted zones. The relationship between HgTF and the apparent oxygen utilization confirms the nutrient-like behaviour of Hg in the NA. An extended optimum multiparameter analysis allowed us to characterize HgTUNF concentrations in the different source water types (SWTs present along the transect. The distribution pattern of HgTUNF, modelled by the mixing of SWTs, show Hg enrichment in Mediterranean waters and North East Atlantic Deep Water and low concentrations in young waters formed in the subpolar gyre and Nordic seas. The change in anthropogenic Hg concentrations in the Labrador Sea Water during its eastward journey suggests a continuous decrease in Hg content in this water mass over the last decades. Calculation of the water transport driven by the Atlantic Meridional Overturning Circulation across the Portugal�

Factors controlling floc settling velocity along a longitudinal estuarine transect

Science.gov (United States)

Manning, A.J.; Schoellhamer, D.H.

2013-01-01

A 147 km longitudinal transect of flocculated cohesive sediment properties in San Francisco Bay (SFB) was conducted on June 17th, 2008. Our aim was to determine the factors that control floc settling velocity along the longitudinal axis of the estuary. The INSSEV-LF video system was used to measure floc diameters and settling velocities at 30 stations at a distance of 0.7 m above the estuary bed. Floc sizes (D) ranged from 22 μm to 639 μm and settling velocities (Ws) ranged between 0.04 mm·s− 1 and 15.8 mm·s− 1 during the longitudinal transect. Nearbed turbulent shear stresses throughout the transect duration were within the 0.2–0.5 Pa range which typically stimulates flocculation growth. The individual D–Ws–floc density plots suggest the suspended sediments encountered throughout SFB were composed of both muddy cohesive sediment and mixed sediments flocs. Mass-weighted population mean settling velocity (Wsmass) ranged from 0.5 mm·s− 1 to 10 mm·s− 1. The macrofloc and microfloc (demarcation at 160 μm) sub-populations demonstrated parameterised settling velocities which spanned nearly double the range of the sample mean settling velocities (Wsmean). The macroflocs tended to dominate the suspended mass (up to 77% of the ambient suspended solid concentration; SSC) from San Pablo Bay to Carquinez Strait (the vicinity of the turbidity maximum zone). Microfloc mass was particularly significant (typically 60–100% of the SSC) in the northern section of South Bay and most of Central Bay. The transect took eleven hours to complete and was not fully synoptic. During slack tide, larger and faster settling flocs deposited, accounting for most of the longitudinal variability. The best single predictor of settling velocity was water velocity 39 min prior to sampling, not suspended-sediment concentration or salinity. Resuspension and settling lags are likely responsible for the lagged response of settling velocity to water velocity. The distribution of

Oceanographic data collected during the Estuary to the Abyss: Exploring Along the Latitude 31-30 Transect (abyss2004) on RV Seward Johnson in Charleston Bump from August 19, 2004 - September 1, 2004 (NODC Accession 0072309)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — The diverse ocean-bottom habitats off the coast of South Carolina and Georgia support a corresponding diversity of organisms. An imaginary line, or transect, running...

Pinch-off syndrome: transection of implantable central venous access device.

Science.gov (United States)

Sugimoto, Takuya; Nagata, Hiroshi; Hayashi, Ken; Kano, Nobuyasu

2012-11-30

As the population of people with cancer increases so does the number of patients who take chemotherapy. Majority of them are administered parentally continuously. Implantable central venous catheter device is a good choice for those patients; however, severe complication would occur concerning the devices. Pinch-off syndrome is one of the most severe complications. The authors report a severe case of pinch-off syndrome. The patient with the implantable central venous device could not take chemotherapy because the device occluded. Further examination revealed the transection of the catheter. The transected fragment of the catheter in the heart was successfully removed by using a loop snare placed through the right femoral vein.

Optimizing Sampling Efficiency for Biomass Estimation Across NEON Domains

Science.gov (United States)

Abercrombie, H. H.; Meier, C. L.; Spencer, J. J.

2013-12-01

Over the course of 30 years, the National Ecological Observatory Network (NEON) will measure plant biomass and productivity across the U.S. to enable an understanding of terrestrial carbon cycle responses to ecosystem change drivers. Over the next several years, prior to operational sampling at a site, NEON will complete construction and characterization phases during which a limited amount of sampling will be done at each site to inform sampling designs, and guide standardization of data collection across all sites. Sampling biomass in 60+ sites distributed among 20 different eco-climatic domains poses major logistical and budgetary challenges. Traditional biomass sampling methods such as clip harvesting and direct measurements of Leaf Area Index (LAI) involve collecting and processing plant samples, and are time and labor intensive. Possible alternatives include using indirect sampling methods for estimating LAI such as digital hemispherical photography (DHP) or using a LI-COR 2200 Plant Canopy Analyzer. These LAI estimations can then be used as a proxy for biomass. The biomass estimates calculated can then inform the clip harvest sampling design during NEON operations, optimizing both sample size and number so that standardized uncertainty limits can be achieved with a minimum amount of sampling effort. In 2011, LAI and clip harvest data were collected from co-located sampling points at the Central Plains Experimental Range located in northern Colorado, a short grass steppe ecosystem that is the NEON Domain 10 core site. LAI was measured with a LI-COR 2200 Plant Canopy Analyzer. The layout of the sampling design included four, 300 meter transects, with clip harvests plots spaced every 50m, and LAI sub-transects spaced every 10m. LAI was measured at four points along 6m sub-transects running perpendicular to the 300m transect. Clip harvest plots were co-located 4m from corresponding LAI transects, and had dimensions of 0.1m by 2m. We conducted regression analyses

Geochemistry of soils along a transect from Central Mexico to the Pacific Coast: a pilot study for continental-scale geochemical mapping

Science.gov (United States)

Chiprés, J.A.; de la Calleja,; Tellez, J.I.; Jiménez, F.; Cruz, Carlos; Guerrero, E.G.; Castro, J.; Monroy, M.G.; Salinas, J.C.

2009-01-01

The Mexican Geological Survey (SGM), the National Institute of Statistics, Geography and Informatics (INEGI) and the Autonomous University of San Luis Potosi (UASLP) have established a multidisciplinary team with the objective of creating a national program of geochemical mapping of soils in Mexico. This is being done as part of the North American Soil Geochemical Landscapes Project in partnership with the US Geological Survey and the Geological Survey of Canada. As the first step, a pilot study was conducted over a transect that extends from the Mexico–US border near Ciudad Juarez in the north to the Pacific Ocean in the south. This pilot transect was conducted in two phases, and this paper presents results from the first phase, which sampled soils at about a 40-km spacing along a 730-km transect beginning in Central Mexico and ending at the Pacific Coast. Samples were collected from the A and C horizons at each site and 60 elements were analyzed. This pilot study demonstrates that geochemical mapping based on a 40-km spacing is adequate to identify broad-scale geochemical patterns. Geologic influence (i.e., soil parent material) was the most important factor influencing the distribution of elements along the transect, followed by the influence of regional mineralization. The study also showed that influence by human activities over the transect is minimal except possibly in large mining districts. A comparison of element abundance in the A horizon with the environmental soil guidelines in Mexico showed that the natural concentrations of the studied soils were lower than the established threshold for soil restoration with the exception of V and As. The former had a median value (75 mg/kg) approximately equal to the value established in Mexico for soil restoration in agricultural and residential lands (78 mg/kg), and the latter had three values higher than the 22 mg/kg threshold for soil restoration in agricultural and residential lands. These cases demonstrate

The influence of surgical transection and anastomosis on the rate of cell proliferation in the colonic epithelium of normal and DMH-treated rats.

Science.gov (United States)

Barkla, D H; Tutton, P M

1983-10-01

Normal and DMH-treated male rats aged 18-20 weeks underwent surgical transection and anastomosis of the transverse colon. Animals were subsequently killed at intervals of 14, 30 and 72 days. Three hours prior to sacrifice animals were injected with vinblastine sulphate and mitotic indices were subsequently estimated in histological sections. Possible differences between experimental and control groups were tested using a Student's t-test. The results show that the accumulated mitotic indices in normal and DMH-treated colon are statistically similar. The results also show that transection and anastomosis stimulates cell division in both normal and DMH-treated colon and that the increase is of greater amplitude and more prolonged duration in the DMH-treated rats. Carcinomas developed close to the line of anastomosis in DMH-treated but not in control rats. The results support the hypothesis that non-specific injury to hyperplastic colonic epithelium promotes carcinogenesis.

Neurogenesis and growth factors expression after complete spinal cord transection in Pleurodeles waltlii

Directory of Open Access Journals (Sweden)

Amira Z Zaky

2015-01-01

Full Text Available Following spinal lesion, connections between the supra-spinal centers and spinal neuronal networks can be disturbed, which causes the deterioration or even the complete absence of sublesional locomotor activity. In Mammals, possibilities of locomotion restoration are much reduced since descending tracts either have very poor regenerative ability or do not regenerate at all. However, in lower Vertebrates, there is spontaneous locomotion recuperation after complete spinal cord transection at the mid-trunk level. This phenomenon depends on a translesional descending axon re-growth originating from the brainstem. On the other hand, cellular and molecular mechanisms underlying spinal cord regeneration and in parallel, locomotion restoration of the animal, are not well known. FGF-2 plays an important role in different processes such as neural induction, neuronal progenitor proliferation and their differentiation. Studies had shown an over expression of this growth factor after tail amputation. Nestin, a protein specific for intermediate filaments, is considered as an early marker for neuronal precursors. It has been recently shown that its expression increases after tail transection in Urodeles. Using this marker and western blots, our results show that the increase in the number of FGF-2 and FGFR2 mRNAs is correlated with an increase in neurogenesis especially in the central canal lining cells immediately after lesion. This study also confirms that spinal cord re-growth through the lesion site initially follows a rostrocaudal direction. In addition to its role known in neuronal differentiation, FGF-2 could be implicated in the differentiation of ependymal cells into neuronal progenitors.

Measurements and Interpretation of Surface Mixing Ratios of CH4 and CO and δ 13C and δ D of CH4 in Air from Pacific Ocean Transects Between Auckland, New Zealand and Los Angeles, California

Science.gov (United States)

Ajie, H. O.; Tyler, S. C.; Gotoh, A. A.; McMillan, A. M.; Rice, A. L.; Lowe, D. C.

2003-12-01

We report on measurements of atmospheric CH4 and CO mixing ratios and δ 13C of CH4 from air samples collected every 2.5 to 5° latitude along a transect over the Pacific Ocean using container ships of P&O Nedlloyd (formerly Blue Star) shipping line. Data presented here begins in June 1996 and extends to January 2002. Scientists from the National Institute of Water and Atmospheric Research in New Zealand and from University of California, Irvine alternate sampling trips so that a transect between Auckland, New Zealand (35° S) and Los Angeles, California (35° N) can be sampled over a period of ˜15 days approximately every four months. Data sets from the two laboratories are intercalibrated through a sample exchange program. The data provide detail on the spatial and seasonal variation of CH4 and CO mixing ratios and stable isotope ratios of CH4 over the Pacific equatorial region, including the Intertropical Convergence Zone (ITCZ) and both northern and southern temperate zones to about 30° latitude, including the South Pacific Convergence Zone (SPCZ). Data from 18 transect samplings so far clearly show that δ 13C in the mid latitudes of both hemispheres are ˜6 months out of phase. In June, a minimum in δ 13C CH4 in the southern hemisphere (SH) coincides approximately with the maximum in the northern hemisphere (NH) seasonal cycle. Because the NH is less enriched in 13C than the SH this situation results in a remarkably flat gradient between 30° N and 30° S. In November the opposite situation occurs with the SH mid latitude maximum coinciding with the minimum in the NH cycle, leading to a relatively large gradient of ˜0.5‰ between the hemispheres. We discuss how CH4 and CO mixing ratios are related to the changing positions and strengths of the ITCZ and SPCZ and how this data can be used in multi-dimensional models of atmospheric chemistry and transport to better define CH4 sources and sinks both temporally and spatially.

Seasonality of runoff and precipitation regimes along transects in Peru and Austria

OpenAIRE

Gaudry Maria M. Cárdenas; Gutknecht Dieter; Parajka Juraj; Perdigão Rui A.P.; Blöschl Günter

2017-01-01

The aim of this study is to understand the seasonalities of runoff and precipitation and their controls along two transects in Peru and one transect in Austria. The analysis is based on daily precipitation data at 111 and 61 stations in Peru and Austria, respectively, and daily discharge data at 51 and 110 stations. The maximum Pardé coefficient is used to quantify the strength of the seasonalities of monthly precipitation and runoff. Circular statistics are used to quantify the seasonalities...

Space density and clustering properties of a new sample of emission-line galaxies

International Nuclear Information System (INIS)

Wasilewski, A.J.

1982-01-01

A moderate-dispersion objective-prism survey for low-redshift emission-line galaxies has been carried out in an 825 sq. deg. region of sky with the Burrell Schmidt telescope of Case Western Reserve University. A 4 0 prism (300 A/mm at H#betta#) was used with the Illa-J emulsion to show that a new sample of emission-line galaxies is available even in areas already searched with the excess uv-continuum technique. The new emission-line galaxies occur quite commonly in systems with peculiar morphology indicating gravitational interaction with a close companion or other disturbance. About 10 to 15% of the sample are Seyfert galaxies. It is suggested that tidal interaction involving matter infall play a significant role in the generation of an emission-line spectrum. The space density of the new galaxies is found to be similar to the space density of the Makarian galaxies. Like the Markarian sample, the galaxies in the present survey represent about 10% of all galaxies in the absolute magnitude range M/sub p/ = -16 to -22. The observations also indicate that current estimates of dwarf galaxy space densities may be too low. The clustering properties of the new galaxies have been investigated using two approaches: cluster contour maps and the spatial correlation function. These tests suggest that there is weak clustering and possibly superclustering within the sample itself and that the galaxies considered here are about as common in clusters of ordinary galaxies as in the field

On-line determination of manganese in solid seafood samples by flame atomic absorption spectrometry

International Nuclear Information System (INIS)

Yebra, M.C.; Moreno-Cid, A.

2003-01-01

Manganese is extracted on-line from solid seafood samples by a simple continuous ultrasound-assisted extraction system (CUES). This system is connected to an on-line manifold, which permits the flow-injection flame atomic absorption spectrometric determination of manganese. Optimisation of the continuous leaching procedure is performed by an experimental design. The proposed method allows the determination of manganese with a relative standard deviation of 0.9% for a sample containing 23.4 μg g -1 manganese (dry mass). The detection limit is 0.4 μg g -1 (dry mass) for 30 mg of sample and the sample throughput is ca. 60 samples per hour. Accurate results are obtained by measuring TORT-1 certified reference material. The procedure is finally applied to mussel, tuna, sardine and clams samples

Review: Non-transecting bulbar urethroplasty using buccal mucosa ...

African Journals Online (AJOL)

Review: Non-transecting bulbar urethroplasty using buccal mucosa. S Bugeja, S Ivaz, AV Frost, DE Andrich, AR Mundy. Abstract. Augmentation urethroplasty using oral mucosal graft has become the standard surgical treatment of long bulbar strictures. In very tight strictures the urethral plate is narrowed to the extent that an ...

A brain-machine-muscle interface for restoring hindlimb locomotion after complete spinal transection in rats.

Directory of Open Access Journals (Sweden)

Monzurul Alam

Full Text Available A brain-machine interface (BMI is a neuroprosthetic device that can restore motor function of individuals with paralysis. Although the feasibility of BMI control of upper-limb neuroprostheses has been demonstrated, a BMI for the restoration of lower-limb motor functions has not yet been developed. The objective of this study was to determine if gait-related information can be captured from neural activity recorded from the primary motor cortex of rats, and if this neural information can be used to stimulate paralysed hindlimb muscles after complete spinal cord transection. Neural activity was recorded from the hindlimb area of the primary motor cortex of six female Sprague Dawley rats during treadmill locomotion before and after mid-thoracic transection. Before spinal transection there was a strong association between neural activity and the step cycle. This association decreased after spinal transection. However, the locomotive state (standing vs. walking could still be successfully decoded from neural recordings made after spinal transection. A novel BMI device was developed that processed this neural information in real-time and used it to control electrical stimulation of paralysed hindlimb muscles. This system was able to elicit hindlimb muscle contractions that mimicked forelimb stepping. We propose this lower-limb BMI as a future neuroprosthesis for human paraplegics.

Fractured cervical spine and aortic transection.

LENUS (Irish Health Repository)

Griffin, M J

2012-02-03

A 17-year-old victim of a road traffic accident presented. Following investigation diagnoses of fractured first cervical vertebra, aortic transection, diffuse cerebral oedema, fractured right ribs 2-4 and pubic rami were made. Management of this case presented a number of anaesthetic dilemmas: management of the airway, use of cross-clamp vs. shunting or heparinization and bypass, cardiovascular and neurological monitoring, maintenance of cardiovascular stability during and post cross-clamp, minimizing the risk of post-operative renal and neurological dysfunction.

The longitudinal epineural incision and complete nerve transection method for modeling sciatic nerve injury

Directory of Open Access Journals (Sweden)

Xing-long Cheng

2015-01-01

Full Text Available Injury severity, operative technique and nerve regeneration are important factors to consider when constructing a model of peripheral nerve injury. Here, we present a novel peripheral nerve injury model and compare it with the complete sciatic nerve transection method. In the experimental group, under a microscope, a 3-mm longitudinal incision was made in the epineurium of the sciatic nerve to reveal the nerve fibers, which were then transected. The small, longitudinal incision in the epineurium was then sutured closed, requiring no stump anastomosis. In the control group, the sciatic nerve was completely transected, and the epineurium was repaired by anastomosis. At 2 and 4 weeks after surgery, Wallerian degeneration was observed in both groups. In the experimental group, at 8 and 12 weeks after surgery, distinct medullary nerve fibers and axons were observed in the injured sciatic nerve. Regular, dense myelin sheaths were visible, as well as some scarring. By 12 weeks, the myelin sheaths were normal and intact, and a tight lamellar structure was observed. Functionally, limb movement and nerve conduction recovered in the injured region between 4 and 12 weeks. The present results demonstrate that longitudinal epineural incision with nerve transection can stably replicate a model of Sunderland grade IV peripheral nerve injury. Compared with the complete sciatic nerve transection model, our method reduced the difficulties of micromanipulation and surgery time, and resulted in good stump restoration, nerve regeneration, and functional recovery.

Genome flux and stasis in a five millennium transect of European prehistory.

Science.gov (United States)

Gamba, Cristina; Jones, Eppie R; Teasdale, Matthew D; McLaughlin, Russell L; Gonzalez-Fortes, Gloria; Mattiangeli, Valeria; Domboróczki, László; Kővári, Ivett; Pap, Ildikó; Anders, Alexandra; Whittle, Alasdair; Dani, János; Raczky, Pál; Higham, Thomas F G; Hofreiter, Michael; Bradley, Daniel G; Pinhasi, Ron

2014-10-21

The Great Hungarian Plain was a crossroads of cultural transformations that have shaped European prehistory. Here we analyse a 5,000-year transect of human genomes, sampled from petrous bones giving consistently excellent endogenous DNA yields, from 13 Hungarian Neolithic, Copper, Bronze and Iron Age burials including two to high (~22 × ) and seven to ~1 × coverage, to investigate the impact of these on Europe's genetic landscape. These data suggest genomic shifts with the advent of the Neolithic, Bronze and Iron Ages, with interleaved periods of genome stability. The earliest Neolithic context genome shows a European hunter-gatherer genetic signature and a restricted ancestral population size, suggesting direct contact between cultures after the arrival of the first farmers into Europe. The latest, Iron Age, sample reveals an eastern genomic influence concordant with introduced Steppe burial rites. We observe transition towards lighter pigmentation and surprisingly, no Neolithic presence of lactase persistence.

A silicon photo-multiplier signal readout using strip-line and waveform sampling for Positron Emission Tomography

Science.gov (United States)

Kim, H.; Chen, C.-T.; Eclov, N.; Ronzhin, A.; Murat, P.; Ramberg, E.; Los, S.; Kao, C.-M.

2016-09-01

A strip-line and waveform sampling based readout is a signal multiplexing method that can efficiently reduce the readout channels while fully exploiting the fast time characteristics of photo-detectors such as the SiPM. We have applied this readout method for SiPM-based time-of-flight (TOF) positron emission tomography (PET) detectors. We have prototyped strip-line boards in which 8 SiPMs (pitch 5.2 mm) are connected by using a single strip-line, and the signals appearing at the ends of the strip-line are acquired by using the DRS4 waveform sampler at a nominal sampling frequency of 1-5 GS/s. Experimental tests using laser and LYSO scintillator are carried out to assess the performance of the strip-line board. Each SiPM position, which is inferred from the arrival time difference of the two signals at the ends of the strip-line, is well identified with 2.6 mm FWHM resolution when the SiPMs are coupled to LYSO crystals and irradiated by a 22Na source. The average energy and coincidence time resolution corresponding to 511 keV photons are measured to be ∼32% and ∼510 ps FWHM, respectively, at a 5.0 GS/s DRS4 sampling rate. The results show that the sampling rate can be lowered to 1.5 GS/s without performance degradation. These encouraging initial test results indicate that the strip-line and waveform sampling readout method is applicable for SiPM-based TOF PET development.

Effect of Chorda Tympani Nerve Transection on Salt Taste Perception in Mice

Science.gov (United States)

Ishiwatari, Yutaka; Theodorides, Maria L.; Bachmanov, Alexander A.

2011-01-01

Effects of gustatory nerve transection on salt taste have been studied extensively in rats and hamsters but have not been well explored in the mouse. We examined the effects of chorda tympani (CT) nerve transection on NaCl taste preferences and thresholds in outbred CD-1 mice using a high-throughput phenotyping method developed in our laboratory. To measure taste thresholds, mice were conditioned by oral self-administration of LiCl or NaCl and then presented with NaCl concentration series in 2-bottle preference tests. LiCl-conditioned and control NaCl-exposed mice were given bilateral transections of the CT nerve (LiCl-CTX, NaCl-CTX) or were left intact as controls (LiCl-CNT, NaCl-CNT). After recovery from surgery, mice received a concentration series of NaCl (0–300 mM) in 48-h 2-bottle tests. CT transection increased NaCl taste thresholds in LiCl-conditioned mice and eliminated avoidance of concentrated NaCl in control NaCl-exposed mice. This demonstrates that in mice, the CT nerve is important for detection and recognition of NaCl taste and is necessary for the normal avoidance of high concentrations of NaCl. The results of this experiment also show that the method of high-throughput phenotyping of salt taste thresholds is suitable for detecting changes in the taste periphery in mouse genetic studies. PMID:21743094

Potentially toxic metals in ombrotrophic peat along a 400 km English-Scottish transect

Energy Technology Data Exchange (ETDEWEB)

Smith, E.J. [Centre for Ecology and Hydrology (Lancaster), Lancaster Environment Centre, Bailrigg, Lancaster LA1 4AP (United Kingdom); Hughes, S. [Centre for Ecology and Hydrology (Bangor), Deiniol Road, Bangor, Gwynedd LL57 2UP (United Kingdom); Lawlor, A.J. [Centre for Ecology and Hydrology (Lancaster), Lancaster Environment Centre, Bailrigg, Lancaster LA1 4AP (United Kingdom); Lofts, S. [Centre for Ecology and Hydrology (Lancaster), Lancaster Environment Centre, Bailrigg, Lancaster LA1 4AP (United Kingdom); Simon, B.M. [Centre for Ecology and Hydrology (Lancaster), Lancaster Environment Centre, Bailrigg, Lancaster LA1 4AP (United Kingdom); Stevens, P.A. [Centre for Ecology and Hydrology (Bangor), Deiniol Road, Bangor, Gwynedd LL57 2UP (United Kingdom); Stidson, R.T. [Centre for Ecology and Hydrology (Lancaster), Lancaster Environment Centre, Bailrigg, Lancaster LA1 4AP (United Kingdom); Tipping, E. [Centre for Ecology and Hydrology (Lancaster), Lancaster Environment Centre, Bailrigg, Lancaster LA1 4AP (United Kingdom)]. E-mail: et@ceh.ac.uk; Vincent, C.D. [Centre for Ecology and Hydrology (Lancaster), Lancaster Environment Centre, Bailrigg, Lancaster LA1 4AP (United Kingdom)

2005-07-15

Four samples of ombrotrophic peat were collected from each of 10 upland locations in a transect from the southern Pennines to the Highland Boundary Fault, a total distance of ca. 400 km. Bulk compositions and other properties were determined. Total contents of Al and heavy metals (Ni, Cu, Zn, Cd, Pb) were determined following digestion with hydrofluoric acid, and concentrations of metals extractable with dilute nitric acid were also measured. Supernatants obtained from aqueous extractions of the peat samples were analysed for pH, major cations and anions, dissolved organic carbon and dissolved metals, and concentrations of free metal ions (Al{sup 3+}, Ni{sup 2+}, etc.) were estimated by applying a chemical speciation model. Both total and HNO{sub 3}-extractable metal concentrations varied along the transect, the highest values being found at locations close to industrial and former mining areas. The HNO{sub 3}-extractable soil metal contents of Ni, Cu and Cd were appreciably lower than lowest-observed-effect-concentrations (LOEC) for toxicity towards microorganisms in acid, organic rich soils. However, the contents of Zn at two locations, and of Pb at five locations exceeded LOECs, suggesting that they may be exerting toxic effects in the peats. Soil solution concentrations of free heavy metal ions (Cu{sup 2+}, Zn{sup 2+}, Cd{sup 2+}, Pb{sup 2+}) were substantially lower than LOECs for toxicity towards vascular plants, whereas concentrations of Al{sup 3+} were near to toxic levels at two locations. - P eat metal contents depend upon proximity to industrial and mining areas; the metals may be exerting toxic effects in some places.

Improving aquatic warbler population assessments by accounting for imperfect detection.

Directory of Open Access Journals (Sweden)

Steffen Oppel

Full Text Available Monitoring programs designed to assess changes in population size over time need to account for imperfect detection and provide estimates of precision around annual abundance estimates. Especially for species dependent on conservation management, robust monitoring is essential to evaluate the effectiveness of management. Many bird species of temperate grasslands depend on specific conservation management to maintain suitable breeding habitat. One such species is the Aquatic Warbler (Acrocephalus paludicola, which breeds in open fen mires in Central Europe. Aquatic Warbler populations have so far been assessed using a complete survey that aims to enumerate all singing males over a large area. Because this approach provides no estimate of precision and does not account for observation error, detecting moderate population changes is challenging. From 2011 to 2013 we trialled a new line transect sampling monitoring design in the Biebrza valley, Poland, to estimate abundance of singing male Aquatic Warblers. We surveyed Aquatic Warblers repeatedly along 50 randomly placed 1-km transects, and used binomial mixture models to estimate abundances per transect. The repeated line transect sampling required 150 observer days, and thus less effort than the traditional 'full count' approach (175 observer days. Aquatic Warbler abundance was highest at intermediate water levels, and detection probability varied between years and was influenced by vegetation height. A power analysis indicated that our line transect sampling design had a power of 68% to detect a 20% population change over 10 years, whereas raw count data had a 9% power to detect the same trend. Thus, by accounting for imperfect detection we increased the power to detect population changes. We recommend to adopt the repeated line transect sampling approach for monitoring Aquatic Warblers in Poland and in other important breeding areas to monitor changes in population size and the effects of

Evaluation of Meniscal Mechanics and Proteoglycan Content in a Modified Anterior Cruciate Ligament Transection Model

Science.gov (United States)

Fischenich, Kristine M.; Coatney, Garrett A.; Haverkamp, John H.; Button, Keith D.; DeCamp, Charlie; Haut, Roger C.; Haut Donahue, Tammy L.

2014-01-01

Post-traumatic osteoarthritis (PTOA) develops as a result of traumatic loading that causes tears of the soft tissues in the knee. A modified transection model, where the anterior cruciate ligament (ACL) and both menisci were transected, was used on skeletally mature Flemish Giant rabbits. Gross morphological assessments, elastic moduli, and glycosaminoglycan (GAG) coverage of the menisci were determined to quantify the amount of tissue damage 12 weeks post injury. This study is one of the first to monitor meniscal changes after inducing combined meniscal and ACL transections. A decrease in elastic moduli as well as a decrease in GAG coverage was seen. PMID:24749144

Sampling and sample preparation development for analytical and on-line measurement techniques of process liquids; Naeytteenoton ja kaesittelyn kehittaeminen prosessinesteiden analytiikan ja on-line mittaustekniikan tarpeisiin - MPKT 11

Energy Technology Data Exchange (ETDEWEB)

Karttunen, K. [Oulu Univ. (Finland)

1998-12-31

Main goal of the research project is to develop sampling and sample handling methods and techniques for pulp and paper industry to be used for analysis and on-line purposes. The research focus specially on the research and development of the classification and separation methods and techniques needed for liquid and colloidal substances as well as in ion analysis. (orig.)

Sampling and sample preparation development for analytical and on-line measurement techniques of process liquids; Naeytteenoton ja kaesittelyn kehittaeminen prosessinesteiden analytiikan ja on-line mittaustekniikan tarpeisiin - MPKT 11

Energy Technology Data Exchange (ETDEWEB)

Karttunen, K [Oulu Univ. (Finland)

1999-12-31

Main goal of the research project is to develop sampling and sample handling methods and techniques for pulp and paper industry to be used for analysis and on-line purposes. The research focus specially on the research and development of the classification and separation methods and techniques needed for liquid and colloidal substances as well as in ion analysis. (orig.)

Bilateral Traumatic Globe Luxation with Optic Nerve Transection

Directory of Open Access Journals (Sweden)

Levent Tok

2014-12-01

Full Text Available Purpose: The purpose of this study was to document clinical findings and management of a patient with bilateral globe luxation and optic nerve transection. Materials and Methods: A 25-year-old female patient was admitted to the emergency department with bilateral traumatic globe luxation following a motor vehicle accident. Results: Visual acuity testing showed no light perception. The right pupil was dilated and bilaterally did not react to light. The globes were bilaterally intact. A computed tomography scan revealed Le Fort type II fractures, bilateral optic nerve transection and disruption of all extraocular muscles. The globes of the patient were bilaterally reduced into the orbit. However, the patient developed phthisis bulbi in the right eye at month 3. Conclusion: Globe luxation presents a dramatic clinical picture, and may lead to the development of severe complications due to the concomitance of complete optic nerve dissection and multiple traumas. Even if the luxated globe is repositioned into the orbit, there is still an increased risk of the development of phthisis due to ischemia.

Bilateral Traumatic Globe Luxation with Optic Nerve Transection

Science.gov (United States)

Tok, Levent; Tok, Ozlem Yalcin; Argun, Tugba Cakmak; Yilmaz, Omer; Gunes, Alime; Unlu, Elif Nisa; Sezer, Sezgin; Ibisoglu, Seda; Argun, Mehmet

2014-01-01

Purpose The purpose of this study was to document clinical findings and management of a patient with bilateral globe luxation and optic nerve transection. Materials and Methods A 25-year-old female patient was admitted to the emergency department with bilateral traumatic globe luxation following a motor vehicle accident. Results Visual acuity testing showed no light perception. The right pupil was dilated and bilaterally did not react to light. The globes were bilaterally intact. A computed tomography scan revealed Le Fort type II fractures, bilateral optic nerve transection and disruption of all extraocular muscles. The globes of the patient were bilaterally reduced into the orbit. However, the patient developed phthisis bulbi in the right eye at month 3. Conclusion Globe luxation presents a dramatic clinical picture, and may lead to the development of severe complications due to the concomitance of complete optic nerve dissection and multiple traumas. Even if the luxated globe is repositioned into the orbit, there is still an increased risk of the development of phthisis due to ischemia. PMID:25606034

Effects of seismic lines on the abundance of breeding birds in the Kendall Island Bird Sanctuary, Northwest Territories, Canada

Energy Technology Data Exchange (ETDEWEB)

Ashenhurst, A.R.; Hannon, S.J. [Alberta Univ., Edmonton, AB (Canada). Dept. of Biological Sciences

2008-06-15

The effects of oil and gas exploration activities on bird abundance in the Arctic were investigated. The study examined the impacts of new and oil visible seismic lines within the Kendall Island Bird Sanctuary on the abundance of breeding passerines, Lapland longspur, common redpoll, American tree sparrow, and red-necked phalarope in upland tundra region and sedge-willow habitats. Results of the study showed that the effects on abundance with newer seismic lines were not statistically significant for most groups of birds. However, more birds were seen on reference transects than on seismic lines. The seismic lines had a significant impact on passerines grouped in upland tundra, as well as for sparrows in sedge and willows. Along older seismic lines, passerine abundance was lower than on reference transects in upland tundra. The study demonstrated that seismic lines created between 10 and 30 years ago had persistent vegetative changes that have reduced bird abundance. It was concluded that although the birds were not avoiding lines, some birds appeared to have increased the size of their territories in order to compensate for vegetative changes. 34 refs., 4 tabs.

Transected sciatic nerve repair by diode laser protein soldering.

Science.gov (United States)

Fekrazad, Reza; Mortezai, Omid; Pedram, MirSepehr; Kalhori, Katayoun Am; Joharchi, Khojasteh; Mansoori, Korosh; Ebrahimi, Roja; Mashhadiabbas, Fatemeh

2017-08-01

Despite advances in microsurgical techniques, repair of peripheral nerve injuries (PNI) is still a major challenge in regenerative medicine. The standard treatment for PNI includes suturing and anasthomosis of the transected nerve. The objective of this study was to compare neurorraphy (nerve repair) using standard suturingto diode laser protein soldering on the functional recovery of transected sciatic nerves. Thirty adult male Fischer-344 Wistar rats were randomly assigned to 3 groups: 1. The control group, no repair, 2. the standard of care suture group, and 3. The laser/protein solder group. For all three groups, the sciatic nerve was transected and the repair was done immediately. For the suture repair group, 10.0 prolene suture was used and for the laser/protein solder group a diode laser (500mW output power) in combination with bovine serum albumen and indocyanine green dye was used. Behavioral assessment by sciatic functional index was done on all rats biweekly. At 12weeks post-surgery, EMG recordings were done on all the rats and the rats were euthanized for histological evaluation of the sciatic nerves. The one-way ANOVA test was used for statistical analysis. The average time required to perform the surgery was significantly shorter for the laser-assisted nerve repair group compared to the suture group. The EMG evaluation revealed no difference between the two groups. Based on the sciatic function index the laser group was significantly better than the suture group after 12weeks (pneurorraphy using standard suturing methods. Copyright © 2017 Elsevier B.V. All rights reserved.

SAFARI 2000 PAR Measurements, Kalahari Transect, Botswana, Wet Season 2000

Data.gov (United States)

National Aeronautics and Space Administration — Ceptometer data from a Decagon AccuPAR (Model PAR-80) were collected at four sites in Botswana during the SAFARI 2000 Kalahari Transect Wet Season Campaign (March,...

New methods for sampling sparse populations

Science.gov (United States)

Anna Ringvall

2007-01-01

To improve surveys of sparse objects, methods that use auxiliary information have been suggested. Guided transect sampling uses prior information, e.g., from aerial photographs, for the layout of survey strips. Instead of being laid out straight, the strips will wind between potentially more interesting areas. 3P sampling (probability proportional to prediction) uses...

Soil Biogeochemical and Microbial Feedbacks along a Snowmelt-Dominated Hillslope-to-Floodplain Transect in Colorado.

Science.gov (United States)

Sorensen, P.; Beller, H. R.; Bill, M.; Bouskill, N.; Brodie, E.; Chakraborty, R.; Conrad, M. E.; Karaoz, U.; Polussa, A.; Steltzer, H.; Wang, S.; Williams, K. H.; Wilmer, C.; Wu, Y.

2017-12-01

Nitrogen export from mountainous watersheds is a product of multiple interactions among hydrological processes and soil-microbial-plant feedbacks along the continuum from terrestrial to aquatic environments. In snow-dominated systems, like the East River Watershed (CO), seasonal processes such as snowmelt exert significant influence on the annual hydrologic cycle and may also link spatially distinct catchment subsystems, such as hillslope and adjoining riparian floodplains. Further, snowmelt is occurring earlier each year and this is predicted to result in a temporal asynchrony between historically coupled microbial nutrient release and plant nutrient demand in spring, with the potential to increase N export from the East River Watershed. Here we summarize biogeochemical data collected along a hillslope-to-riparian floodplain transect at the East River site. Starting in Fall 2016, we sampled soils at 3 depths and measured dissolved pools of soil nutrients (e.g., NH4+, NO3-, DOC, P), microbial biomass CN, and microbial community composition over a seasonal time course, through periods of snow accumulation, snowmelt, and plant senescence. Soil moisture content in the top 5 cm of floodplain soils was nearly 4X greater across sampling dates, coinciding with 2X greater microbial biomass C, larger extractable pools of NH4+, and smaller pools of NO3- in floodplain vs. hillslope soils. These results suggest that microbially mediated redox processes played an important role in N cycling along the transect. Hillslope vs. floodplain location also appeared to be a key factor that differentiated soil microbial communities (e.g., a more important factor than seasonality or soil depth or type). Snow accumulation and snowmelt exerted substantial influence on soil biogeochemistry. For example, microbial biomass accumulation increased about 2X beneath the winter snowpack. Snowmelt resulted in a precipitous crash in the microbial population, with 2.5X reductions in floodplain and 2X

Terrestrial transect study on driving mechanism of vegetation changes

Institute of Scientific and Technical Information of China (English)

2008-01-01

In terms of Chinese climate-vegetation model based on the classification of plant functional types, to- gether with climatic data from 1951 to 1980 and two future climatic scenarios (SRES-A2 and SRES-B2) in China from the highest and the lowest emission scenarios of greenhouse gases, the distribution patterns of vegetation types and their changes along the Northeast China Transect (NECT) and the North-South Transect of Eastern China (NSTEC) were simulated in order to understand the driving mechanisms of vegetation changes under climatic change. The results indicated that the vegetation distribution patterns would change significantly under future climate, and the major factors driving the vegetation changes were water and heat. However, the responses of various vegetation types to the changes in water and heat factors were obviously different. The vegetation changes were more sensi- tive to heat factors than to water factors. Thus, in the future climate warming will significantly affect vegetation distribution patterns.

Point and Fixed Plot Sampling Inventory Estimates at the Savannah River Site, South Carolina.

Energy Technology Data Exchange (ETDEWEB)

Parresol, Bernard, R.

2004-02-01

This report provides calculation of systematic point sampling volume estimates for trees greater than or equal to 5 inches diameter breast height (dbh) and fixed radius plot volume estimates for trees < 5 inches dbh at the Savannah River Site (SRS), Aiken County, South Carolina. The inventory of 622 plots was started in March 1999 and completed in January 2002 (Figure 1). Estimates are given in cubic foot volume. The analyses are presented in a series of Tables and Figures. In addition, a preliminary analysis of fuel levels on the SRS is given, based on depth measurements of the duff and litter layers on the 622 inventory plots plus line transect samples of down coarse woody material. Potential standing live fuels are also included. The fuels analyses are presented in a series of tables.

Adult opossums (Didelphis virginiana) demonstrate near normal locomotion after spinal cord transection as neonates.

Science.gov (United States)

Wang, X M; Basso, D M; Terman, J R; Bresnahan, J C; Martin, G F

1998-05-01

When the thoracic spinal cord of the North American opossum (Didelphis virginiana) is transected on postnatal day (PD) 5, the site of injury becomes bridged by histologically recognizable spinal cord and axons which form major long tracts grow through the lesion. In the present study we asked whether opossums lesioned on PD5 have normal use of the hindlimbs as adults and, if so, whether that use is dependent upon axons which grow through the lesion site. The thoracic spinal cord was transected on PD5 and 6 months later, hindlimb function was evaluated using the Basso, Beattie, and Bresnahan (BBB) locomotor scale. All animals supported their weight with the hindlimbs and used their hindlimbs normally during overground locomotion. In some cases, the spinal cord was retransected at the original lesion site or just caudal to it 6 months after the original transection and paralysis of the hindlimbs ensued. Surprisingly, however, these animals gradually recovered some ability to support their weight and to step with the hindlimbs. Similar recovery was not seen in animals transected only as adults. In order to verify that descending axons which grew through the lesion during development were still present in the adult animal, opossums subjected to transection of the thoracic cord on PD5 were reoperated and Fast blue was injected several segments caudal to the lesion. In all cases, neurons were labeled rostral to the lesion in each of the spinal and supraspinal nuclei labeled by comparable injections in unlesioned, age-matched controls. The results of orthograde tracing studies indicated that axons which grew through the lesion innervated areas that were appropriate for them. Copyright 1998 Academic Press.

Accuracy Assessment Transects (2013) in the U.S. Virgin Islands

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — This shapefile denotes the location of 399 underwater photos and video transects taken between 3/18 - 3/28/2013 in Fish Bay and Coral Bay, St. John and the St....

Using spatiotemporal models and distance sampling to map the space use and abundance of newly metamorphosed Western Toads (Anaxyrus boreas)

Science.gov (United States)

Chelgren, Nathan D.; Samora, Barbara; Adams, Michael J.; McCreary, Brome

2011-01-01

High variability in abundance, cryptic coloration, and small body size of newly metamorphosed anurans have limited demographic studies of this life-history stage. We used line-transect distance sampling and Bayesian methods to estimate the abundance and spatial distribution of newly metamorphosed Western Toads (Anaxyrus boreas) in terrestrial habitat surrounding a montane lake in central Washington, USA. We completed 154 line-transect surveys from the commencement of metamorphosis (15 September 2009) to the date of first snow accumulation in fall (1 October 2009), and located 543 newly metamorphosed toads. After accounting for variable detection probability associated with the extent of barren habitats, estimates of total surface abundance ranged from a posterior median of 3,880 (95% credible intervals from 2,235 to 12,600) in the first week of sampling to 12,150 (5,543 to 51,670) during the second week of sampling. Numbers of newly metamorphosed toads dropped quickly with increasing distance from the lakeshore in a pattern that differed over the three weeks of the study and contradicted our original hypotheses. Though we hypothesized that the spatial distribution of toads would initially be concentrated near the lake shore and then spread outward from the lake over time, we observed the opposite. Ninety-five percent of individuals occurred within 20, 16, and 15 m of shore during weeks one, two, and three respectively, probably reflecting continued emergence of newly metamorphosed toads from the lake and mortality or burrow use of dispersed individuals. Numbers of toads were highest near the inlet stream of the lake. Distance sampling may provide a useful method for estimating the surface abundance of newly metamorphosed toads and relating their space use to landscape variables despite uncertain and variable probability of detection. We discuss means of improving the precision of estimates of total abundance.

Evaluating the performance of species richness estimators: sensitivity to sample grain size

DEFF Research Database (Denmark)

Hortal, Joaquín; Borges, Paulo A. V.; Gaspar, Clara

2006-01-01

and several recent estimators [proposed by Rosenzweig et al. (Conservation Biology, 2003, 17, 864-874), and Ugland et al. (Journal of Animal Ecology, 2003, 72, 888-897)] performed poorly. 3.  Estimations developed using the smaller grain sizes (pair of traps, traps, records and individuals) presented similar....... Data obtained with standardized sampling of 78 transects in natural forest remnants of five islands were aggregated in seven different grains (i.e. ways of defining a single sample): islands, natural areas, transects, pairs of traps, traps, database records and individuals to assess the effect of using...

A west-east vegetation transect through Africa south of the Tropic of Capricorn

Directory of Open Access Journals (Sweden)

B. J. Coetzee

1975-11-01

Full Text Available Changes in predominant vegetation physiognomy, prominent species and physiography along the route following an I 800 km transect across southern Africa near the Tropic of Capricorn, are described. Eleven main discontinuities in the structure and Holistic composition of the vegetation along the transect are related to a climatic gradient across the Continent. Floristic variation within the main structural types is largely related to rainfall, severity of frost, soil conditions, exposure, slope and aspect. The main vegetation classes distinguished coincide largely with major differences in carrying capacity of the vegetation.

Design of modified annulus air sampling system for the detection of leakage in waste transfer line

International Nuclear Information System (INIS)

Deokar, U.V; Khot, A.R.; Mathew, P.; Ganesh, G.; Tripathi, R.M.; Srivastava, Srishti

2018-01-01

Various liquid waste streams are generated during the operation of reprocessing plant. The High Level (HL), Intermediate Level (IL) and Low Level (LL) liquid wastes generated, are transferred from reprocessing plant to Waste Management Facility. These respective waste streams are transferred through pipe-in-pipe lines along the shielded concrete trench. For detection of radioactive leakage from primary waste transfer line into secondary line, sampling of the annulus air between the two pipes is carried out. The currently installed pressurized annulus air sampling system did not have online leakage detection provision. Hence, there are chances of personal exposure and airborne activity in the working area. To overcome these design flaws, free air flow modified online annulus air sampling system with more safety features is designed

Spontaneous recovery of locomotion induced by remaining fibers after spinal cord transection in adult rats.

Science.gov (United States)

You, Si-Wei; Chen, Bing-Yao; Liu, Hui-Ling; Lang, Bing; Xia, Jie-Lai; Jiao, Xi-Ying; Ju, Gong

2003-01-01

A major issue in analysis of experimental results after spinal cord injury is spontaneous functional recovery induced by remaining nerve fibers. The authors investigated the relationship between the degree of locomotor recovery and the percentage and location of the fibers that spared spinal cord transection. The spinal cords of 12 adult rats were transected at T9 with a razor blade, which often resulted in sparing of nerve fibers in the ventral spinal cord. The incompletely-transected animals were used to study the degree of spontaneous recovery of hindlimb locomotion, evaluated with the BBB rating scale, in correlation to the extent and location of the remaining fibers. Incomplete transection was found in the ventral spinal cord in 42% of the animals. The degree of locomotor recovery was highly correlated with the percentage of the remaining fibers in the ventral and ventrolateral funiculi. In one of the rats, 4.82% of remaining fibers in unilateral ventrolateral funiculus were able to sustain a certain recovery of locomotion. Less than 5% of remaining ventrolateral white matter is sufficient for an unequivocal motor recovery after incomplete spinal cord injury. Therefore, for studies with spinal cord transection, the completeness of sectioning should be carefully checked before any conclusion can be reached. The fact that the degree of locomotor recovery is correlated with the percentage of remaining fibers in the ventrolateral spinal cord, exclusive of most of the descending motor tracts, may imply an essential role of propriospinal connections in the initiation of spontaneous locomotor recovery.

Transection of Nasolacrimal Duct in Endoscopic Medial Maxillectomy: Implication on Epiphora.

Science.gov (United States)

Imre, Abdulkadir; Imre, Seher Saritepe; Pinar, Ercan; Ozkul, Yilmaz; Songu, Murat; Ece, Ahmet Ata; Aladag, Ibrahim

2015-10-01

Management of the nasolacrimal system is usually recommended during medial maxillectomy via external approach because of reported higher rates of postoperative epiphora. Association of the endoscopic medial maxillectomy (EMM) with epiphora, however, is not clearly stated. In this study, we attempted to evaluate whether patients develop epiphora after simple transection of the nasolacrimal duct during EMM. Medical records of 26 patients who underwent endoscopic tumor resection for inverted papilloma (IP) were retrospectively reviewed. Patients who underwent EMM with nasolacrimal canal transection were included and recalled for lacrimal system evaluation. Twelve patients were eligible for inclusion and fluorescein dye disappearance test (FDDT) was performed for each patient. Patient demographics, tumor data, surgical procedures, and follow-up time were recorded. Of the 12 patients included in the study, 6 underwent canine fossa transantral approach concurrently with EMM. The mean duration of follow-up was 21.1 months (range, 6-84 months). Eight patients were graded as 0, whereas 4 patients were graded as 1 according to FDDT. All test results were interpreted as negative for epiphora. All patients were completely symptom free of epiphora. Epiphora after EMM with nasolacrimal canal transection among patients with sinonasal tumors appears to be uncommon. Therefore, prophylactic concurrent management of nasolacrimal system including stenting, dacryocystorhinostomy (DCR), or postoperative lacrimal lavage are not mandatory for all patients.

Polyethylene glycol restores axonal conduction after corpus callosum transection

Directory of Open Access Journals (Sweden)

Ravinder Bamba

2017-01-01

Full Text Available Polyethylene glycol (PEG has been shown to restore axonal continuity after peripheral nerve transection in animal models. We hypothesized that PEG can also restore axonal continuity in the central nervous system. In this current experiment, coronal sectioning of the brains of Sprague-Dawley rats was performed after animal sacrifice. 3Brain high-resolution microelectrode arrays (MEA were used to measure mean firing rate (MFR and peak amplitude across the corpus callosum of the ex-vivo brain slices. The corpus callosum was subsequently transected and repeated measurements were performed. The cut ends of the corpus callosum were still apposite at this time. A PEG solution was applied to the injury site and repeated measurements were performed. MEA measurements showed that PEG was capable of restoring electrophysiology signaling after transection of central nerves. Before injury, the average MFRs at the ipsilateral, midline, and contralateral corpus callosum were 0.76, 0.66, and 0.65 spikes/second, respectively, and the average peak amplitudes were 69.79, 58.68, and 49.60 μV, respectively. After injury, the average MFRs were 0.71, 0.14, and 0.25 spikes/second, respectively and peak amplitudes were 52.11, 8.98, and 16.09 μV, respectively. After application of PEG, there were spikes in MFR and peak amplitude at the injury site and contralaterally. The average MFRs were 0.75, 0.55, and 0.47 spikes/second at the ipsilateral, midline, and contralateral corpus callosum, respectively and peak amplitudes were 59.44, 45.33, 40.02 μV, respectively. There were statistically differences in the average MFRs and peak amplitudes between the midline and non-midline corpus callosum groups (P < 0.01, P < 0.05. These findings suggest that PEG restores axonal conduction between severed central nerves, potentially representing axonal fusion.

Polyethylene glycol restores axonal conduction after corpus callosum transection.

Science.gov (United States)

Bamba, Ravinder; Riley, D Colton; Boyer, Richard B; Pollins, Alonda C; Shack, R Bruce; Thayer, Wesley P

2017-05-01

Polyethylene glycol (PEG) has been shown to restore axonal continuity after peripheral nerve transection in animal models. We hypothesized that PEG can also restore axonal continuity in the central nervous system. In this current experiment, coronal sectioning of the brains of Sprague-Dawley rats was performed after animal sacrifice. 3Brain high-resolution microelectrode arrays (MEA) were used to measure mean firing rate (MFR) and peak amplitude across the corpus callosum of the ex-vivo brain slices. The corpus callosum was subsequently transected and repeated measurements were performed. The cut ends of the corpus callosum were still apposite at this time. A PEG solution was applied to the injury site and repeated measurements were performed. MEA measurements showed that PEG was capable of restoring electrophysiology signaling after transection of central nerves. Before injury, the average MFRs at the ipsilateral, midline, and contralateral corpus callosum were 0.76, 0.66, and 0.65 spikes/second, respectively, and the average peak amplitudes were 69.79, 58.68, and 49.60 μV, respectively. After injury, the average MFRs were 0.71, 0.14, and 0.25 spikes/second, respectively and peak amplitudes were 52.11, 8.98, and 16.09 μV, respectively. After application of PEG, there were spikes in MFR and peak amplitude at the injury site and contralaterally. The average MFRs were 0.75, 0.55, and 0.47 spikes/second at the ipsilateral, midline, and contralateral corpus callosum, respectively and peak amplitudes were 59.44, 45.33, 40.02 μV, respectively. There were statistically differences in the average MFRs and peak amplitudes between the midline and non-midline corpus callosum groups ( P < 0.01, P < 0.05). These findings suggest that PEG restores axonal conduction between severed central nerves, potentially representing axonal fusion.

Automated Sample Exchange Robots for the Structural Biology Beam Lines at the Photon Factory

International Nuclear Information System (INIS)

Hiraki, Masahiko; Watanabe, Shokei; Yamada, Yusuke; Matsugaki, Naohiro; Igarashi, Noriyuki; Gaponov, Yurii; Wakatsuki, Soichi

2007-01-01

We are now developing automated sample exchange robots for high-throughput protein crystallographic experiments for onsite use at synchrotron beam lines. It is part of the fully automated robotics systems being developed at the Photon Factory, for the purposes of protein crystallization, monitoring crystal growth, harvesting and freezing crystals, mounting the crystals inside a hutch and for data collection. We have already installed the sample exchange robots based on the SSRL automated mounting system at our insertion device beam lines BL-5A and AR-NW12A at the Photon Factory. In order to reduce the time required for sample exchange further, a prototype of a double-tonged system was developed. As a result of preliminary experiments with double-tonged robots, the sample exchange time was successfully reduced from 70 seconds to 10 seconds with the exception of the time required for pre-cooling and warming up the tongs

Endovascular stent graft treatment of acute thoracic aortic transections due to blunt force trauma.

LENUS (Irish Health Repository)

Bjurlin, Marc A

2012-02-01

Endovascular stent graft treatment of acute thoracic aortic transections is an encouraging minimally invasive alternative to open surgical repair. Between 2006 and 2008, 16 patients with acute thoracic aortic transections underwent evaluation at our institution. Seven patients who were treated with an endovascular stent graft were reviewed. The mean Glasgow Coma Score was 13.0, probability of survival was .89, and median injury severity score was 32. The mean number of intensive care unit days was 7.7, mean number of ventilator support days was 5.4, and hospital length of stay was 10 days. Mean blood loss was 285 mL, and operative time was 143 minutes. Overall mortality was 14%. Procedure complications were a bleeding arteriotomy site and an endoleak. Endovascular treatment of traumatic thoracic aortic transections appears to demonstrate superior results with respect to mortality, blood loss, operative time, paraplegia, and procedure-related complications when compared with open surgical repair literature.

Spatial distribution of phytoplankton in Spring 2004 along a transect in the eastern part of the North Sea

DEFF Research Database (Denmark)

Skaloud, P.; Rezacova, M.; Ellegaard, Marianne

2006-01-01

were analyzed by multivariate statistics. Only distance from the coast was found to be a significant factor for algal distribution along the transect. Three main areas of the transect were found: the coastal, middle and oceanic areas. Diatoms, mainly the centric ones, were the most abundant group......, although the species composition was different. Some species were found to prefer coastal waters, other species were characterized as oceanic, and several species were found at all stations. Porosira glacialis showed an atypical distribution along the transect, with highest abundances at both coastal...... and oceanic stations....

Iron content and solubility in dust from high-alpine snow along a north-south transect of High Asia

OpenAIRE

Wu, Guangjian; Zhang, Chenglong; Li, Zhongqin; Zhang, Xuelei; Gao, Shaopeng

2012-01-01

This study describes the dissolved and insoluble iron fraction of dust (mineral aerosol) in high-alpine snow samples collected along a north-south transect across High Asia (Eastern Tien Shan, Qilian Shan, and Southern Tibetan Plateau). This dust provides the basic chemical properties of mid- and high-level tropospheric Asian dust that can supply the limiting iron nutrient for phytoplankton growth in the North Pacific. The iron content in Asian dust averages 4.95% in Eastern Tien Shan, 3.38–5...

Case of pituitary stalk transection syndrome ascertained after breech delivery.

Science.gov (United States)

Fukuta, Kaori; Hidaka, Takao; Ono, Yosuke; Kochi, Keiko; Yasoshima, Kuniaki; Arai, Takashi

2016-02-01

Pituitary stalk transection syndrome (PSTS) is a rare complication that can accompany breech delivery. Early diagnosis of this syndrome is difficult, and it may cause a serious delay in the diagnosis. We present a case of PSTS ascertained after breech delivery. A 20-year-old woman presented with primary amenorrhea. The patient was born by breech delivery and had a history of treatment for pituitary dwarfism. Her laboratory findings showed pituitary hypothyroidism, and hormone replacement therapy was initiated. At 28 years old, she became pregnant and had a normal delivery at 38 weeks' gestation. One year after delivery, her thyroid hormone level changed. Laboratory test showed adrenocortical insufficiency, and magnetic resonance imaging of the pituitary gland showed transection of the pituitary stalk and development of an ectopic posterior lobe. These findings were compatible with PSTS. When a patient who has been born by breech delivery presents with symptoms of pituitary deficiency, PSTS should be considered in the differential diagnosis. © 2015 Japan Society of Obstetrics and Gynecology.

The transect of happiness and community’s capability in urbanizing Yogyakarta

Science.gov (United States)

Pramono, RWD

2018-03-01

The idea of this paper is that happy-friendly city is it that able to support capability. In addition to factors affixed to an individual, an important element determining someone’s happiness is the quality of a place. This research tries to explain the role of quality of place formed by urbanization process by taking Yogyakarta case as the sample. The importance of variation of particular area caused by urbanization is revealed using transect method. This method showed the shifting gradation from the very center of the city that first experienced urbanization up to the peripheral that experienced it last. The initial result of this clustered-multistage random sampling shows a gradation in capability. It also describes the similar tendency regarding self-evaluation against happiness although not very clear. Further analysis is conducted to define influencing factors. They consist of 40 capability assets that belong to Individual Tangible Asset, Public Tangible Asset, Individual Intangible Asset, Social Institutional Asset, and Economic Institutional Asset. However, the focus of analysis will be on variables included in Public Tangible Asset, Social Institutional Asset, and Economic Institutional Asset called as place-attached assets.

Multivariate analysis of the geochemistry and mineralogy of soils along two continental-scale transects in North America

Science.gov (United States)

Drew, L.J.; Grunsky, E.C.; Sutphin, D.M.; Woodruff, L.G.

2010-01-01

Soils collected in 2004 along two North American continental-scale transects were subjected to geochemical and mineralogical analyses. In previous interpretations of these analyses, data were expressed in weight percent and parts per million, and thus were subject to the effect of the constant-sum phenomenon. In a new approach to the data, this effect was removed by using centered log-ratio transformations to 'open' the mineralogical and geochemical arrays. Multivariate analyses, including principal component and linear discriminant analyses, of the centered log-ratio data reveal the effects of soil-forming processes, including soil parent material, weathering, and soil age, at the continental-scale of the data arrays that were not readily apparent in the more conventionally presented data. Linear discriminant analysis of the data arrays indicates that the majority of the soil samples collected along the transects can be more successfully classified with Level 1 ecological regional-scale classification by the soil geochemistry than soil mineralogy. A primary objective of this study is to discover and describe, in a parsimonious way, geochemical processes that are both independent and inter-dependent and manifested through compositional data including estimates of the elements and corresponding mineralogy. ?? 2010.

Effects of different delayed exercise regimens on cognitive performance in fimbria‑fornix transected rats

DEFF Research Database (Denmark)

Wogensen, Elise; Marschner, Linda; Gram, Marie Gajhede

2017-01-01

Studies have shown that exercise can positively influence cognitive performance after brain injury. This study investigated the effects of different exercise regimens on allocentric place learning after fimbria‑fornix (FF) transection. One hundred and sixteen pre‑shaped rats were subjected either...... to a mechanical transection of the FF or control sham surgery and divided into following groups: i) no exercise (NE), ii) voluntary exercise in a running wheel (RW), iii) forced swimming exercise administered as interval training of short (3x5 min) duration (FS‑SI), iv) forced swimming exercise administered...

From echolocation clicks to animal density – acoustic sampling of harbour porpoises with static dataloggers

DEFF Research Database (Denmark)

Kyhn, Line Anker; Tougaard, Jakob; Thomas, L.

2012-01-01

Monitoring abundance and population trends of small odontocetes is notoriously difficult and labour intensive. There is a need to develop alternative methods to the traditional visual line transect surveys, especially for low density areas. Here, the prospect of obtaining robust density estimates....... This provides a method suitable for monitoring in areas with densities too low for visual surveys to be practically feasible, e.g. the endangered harbour porpoise population in the Baltic....... for porpoises by passive acoustic monitoring (PAM) is demonstrated by combining rigorous application of methods adapted from distance sampling to PAM. Acoustic dataloggers (T-PODs) were deployed in an area where harbour porpoises concurrently were tracked visually. Probability of detection was estimated...

Complex thrusting at the toe of the Nankai accretionary prism, NanTroSEIZE Kumano transect

Science.gov (United States)

Moore, G. F.; Park, J.; Kodaira, S.; Kaneda, Y.

2009-12-01

Seismic reflection data collected over the past 10 years by the Institute for Research on Earth Evolution (IFREE) of Japan Agency for Marine Earth Science and Technology (JAMSTEC) image a zone of complex thrusting at the toe of the Nankai accretionary prism south of Kii Peninsula, Honshu, Japan. The frontal part of the Nankai prism west of Shionomisaki Canyon (SC) at ~136° E, including the Muroto and Ashizuri Transects off Shikoku, is generally formed of imbricate thrusts with spacing of ~ 1-3 km that dip ~25-35° landward and sole into a prominent décollement. Out-of-sequence thrusts (OOSTs) are usually restricted to the landward margin of this imbricate thrust zone. East of SC, in the Kumano Transect area, the imbricate thrust zone is bounded on its seaward edge by a frontal thrust block that is ~5-6 km wide and consists of several OOSTs. The frontal thrust dips ~5-10° under this ~2-4 km thick block, emplacing this thrust sheet over the trench floor. The number and character of thrusts within the frontal thrust block vary laterally along strike. The 2006 Kumano 3D seismic data set images details of one segment of this complex frontal thrust block. Out-of-sequence faulting has led to underplating of several smaller thrust slices and movement along oblique ramps has led to a complex pattern of faulting that cannot be recognized in even closely-spaced 2D seismic lines. The frontal thrust block is further modified by subduction of seamounts and ridges that have caused large slumps of material from the block.

State-space approach to evaluate spatial variability of field measured soil water status along a line transect in a volcanic-vesuvian soil

Directory of Open Access Journals (Sweden)

A. Comegna

2010-12-01

Full Text Available Unsaturated hydraulic properties and their spatial variability today are analyzed in order to use properly mathematical models developed to simulate flow of the water and solute movement at the field-scale soils. Many studies have shown that observations of soil hydraulic properties should not be considered purely random, given that they possess a structure which may be described by means of stochastic processes. The techniques used for analyzing such a structure have essentially been based either on the theory of regionalized variables or to a lesser extent, on the analysis of time series. This work attempts to use the time-series approach mentioned above by means of a study of pressure head h and water content θ which characterize soil water status, in the space-time domain. The data of the analyses were recorded in the open field during a controlled drainage process, evaporation being prevented, along a 50 m transect in a volcanic Vesuvian soil. The isotropic hypothesis is empirical proved and then the autocorrelation ACF and the partial autocorrelation functions PACF were used to identify and estimate the ARMA(1,1 statistical model for the analyzed series and the AR(1 for the extracted signal. Relations with a state-space model are investigated, and a bivariate AR(1 model fitted. The simultaneous relations between θ and h are considered and estimated. The results are of value for sampling strategies and they should incite to a larger use of time and space series analysis.

Microbial characteristics of soils on a latitudinal transect in Siberia

Czech Academy of Sciences Publication Activity Database

Šantrůčková, Hana; Bird, M. I.; Kalaschnikov, Y. N.; Grund, M.; Elhottová, Dana; Šimek, Miloslav; Grigoryev, S.; Gleixner, G.; Arneth, A.; Schulze, E.D.; Lloyd, J.

2003-01-01

Roč. 9, - (2003), s. 1106-1117 ISSN 1354-1013 R&D Projects: GA ČR GA526/99/P033 Institutional research plan: CEZ:AV0Z6066911 Keywords : latitudial transect * microbial net growth rate * soil microbial activity Subject RIV: EH - Ecology, Behaviour Impact factor: 4.152, year: 2003

The retention of iodine in stainless steel sample lines

Energy Technology Data Exchange (ETDEWEB)

Evans, G.J.; Deir, C. [Univ. of Toronto (Canada); Ball, J.M. [Whiteshell Laboratories, Pinawa (Canada)

1995-02-01

Following an accident in a multi-unit CANDU nuclear generating station, decontamination of air vented from containment would play a critical role in minimizing the release of iodine to the environment. The concentration of gas phase iodine in containment air would be measured using the post accident radiation monitoring system, requiring that air samples be passed through a considerable length of tubing to a remote location where the desired measurements could safely be made. A significant loss of iodine, due to adsorption on the sample line surfaces, could greatly distort the measurement. In this study, the retention of I{sub 2}(g) on stainless steel was evaluated in bench scale experiments in order to evaluate, and if possible minimise, the extent of any such line losses. Experiments at the University of Toronto were performed using 6 inch lengths of 1/4 inch stainless steel tubing. Air, containing I-131 labelled I{sub 2}(g), ranging in concentration from 10{sup {minus}10} to 10{sup {minus}6} mol/dm{sup 3} and relative humidity (:RH) from 20 to 90 %, was passed through tubing samples maintained at temperatures ranging from 25 to 90{degrees}C. Adsorption at low gas phase iodine concentrations differed substantially from that at higher concentrations. The rate of deposition was proportional to the gas phase concentration, giving support to the concept of a first order deposition velocity. The surface loading increased with increasing relative humidity, particularly at low RH values, while the deposition rate decreased with increasing temperature. Surface water on the steel may play an important role in the deposition process. The chemisorbed iodine was located primarily in areas of corrosion. Furthermore, water used to wash the steel contained Fe, Mn and iodine in the form of iodide, suggesting that I{sub 2} reacted to form metal iodides. The deposition of I{sub 2} was also found to depend on the initial surface condition.

CORRELATION ANALYSIS OF A LARGE SAMPLE OF NARROW-LINE SEYFERT 1 GALAXIES: LINKING CENTRAL ENGINE AND HOST PROPERTIES

International Nuclear Information System (INIS)

Xu Dawei; Komossa, S.; Wang Jing; Yuan Weimin; Zhou Hongyan; Lu Honglin; Li Cheng; Grupe, Dirk

2012-01-01

We present a statistical study of a large, homogeneously analyzed sample of narrow-line Seyfert 1 (NLS1) galaxies, accompanied by a comparison sample of broad-line Seyfert 1 (BLS1) galaxies. Optical emission-line and continuum properties are subjected to correlation analyses, in order to identify the main drivers of the correlation space of active galactic nuclei (AGNs), and of NLS1 galaxies in particular. For the first time, we have established the density of the narrow-line region as a key parameter in Eigenvector 1 space, as important as the Eddington ratio L/L Edd . This is important because it links the properties of the central engine with the properties of the host galaxy, i.e., the interstellar medium (ISM). We also confirm previously found correlations involving the line width of Hβ and the strength of the Fe II and [O III] λ5007 emission lines, and we confirm the important role played by L/L Edd in driving the properties of NLS1 galaxies. A spatial correlation analysis shows that large-scale environments of the BLS1 and NLS1 galaxies of our sample are similar. If mergers are rare in our sample, accretion-driven winds, on the one hand, or bar-driven inflows, on the other hand, may account for the strong dependence of Eigenvector 1 on ISM density.

Sleeve resection for delayed presentation of traumatic bronchial transection.

LENUS (Irish Health Repository)

Mohamed, H Y

2010-02-01

Tracheobronchial disruption is uncommon in blunt chest trauma. Many of these patients die before reaching the hospital. In the majority of survivors diagnosis is occasionally delayed resulting in complications like airway stenosis and lung collapse. Thus it is important to have radiological follow up after severe thoracic trauma. Sleeve resection can be an excellent option to conserve lung tissue in delayed presentation of bronchial transection.

105-K east sandfilter backwash line sample analysis report: Third campaign

International Nuclear Information System (INIS)

Miller, G.L.; Bechtold, D.B.

1996-01-01

This project seeks to produce uranium (U) and plutonium (Pu) analyses of samples taken from the KE basin filter backwash line each time the sand filter is backwashed. K Basin operations will use the analytical results to determine additions of fissile materials to the backwash sludge pit and thereby maintain a running inventory of fissile elements in the pit. K Basin operations must not exceed a certain total inventory in order to be within a criticality specification. The third campaign of this project consisted of three samples, numbered by the customer 245KEB, 246KEB, and 247KEB. A revised letter of instruction controlled their processing

Evaluation of different continuous cell lines in the isolation of mumps virus by the shell vial method from clinical samples

Science.gov (United States)

Reina, J; Ballesteros, F; Mari, M; Munar, M

2001-01-01

Aims—To compare prospectively the efficacy of the Vero, LLC-MK2, MDCK, Hep-2, and MRC-5 cell lines in the isolation of the mumps virus from clinical samples by means of the shell vial method. Methods—During an epidemic outbreak of parotiditis 48 clinical samples (saliva swabs and CSF) were studied. Two vials of the Vero, LLC-MK2, MDCK, MRC-5, and Hep-2 cell lines were inoculated with 0.2 ml of the samples by the shell vial assay. The vials were incubated at 36°C for two and five days. The vials were then fixed with acetone at -20°C for 10 minutes and stained by a monoclonal antibody against mumps virus by means of an indirect immunofluorescence assay. Results—The mumps virus was isolated from 36 samples. The Vero and LLC-MK2 cell lines showed a 100% isolation capacity, MDCK showed 77.7%, MRC-5 showed 44.4%, and Hep-2 showed 22.2%. The Vero and LLC-MK2 lines were significantly different to the other cell lines (p 5 infectious foci) were 94.4% for Vero, 97.2% for LLC-MK2, 5.5% for MDCK, 5.5% for Hep-2, and 0% for MRC-5. Conclusions—The Vero and LLC-MK2 cell lines are equally efficient at two and five days incubation for the isolation of the mumps virus from clinical samples, and the use of the shell vial method considerably shortens the time of aetiological diagnosis with higher specificity. Key Words: mumps virus • Vero cell line • LLC-MK2 cell line • MDCK cell line • Hep-2 cell line • MRC-5 cell line • isolation • shell vial PMID:11729211

Pituitary stalk transection syndrome: Comparison of clinico-radiological features in adults and children with review of literature

International Nuclear Information System (INIS)

Kulkarni, Chinmay; Moorthy, Srikanth; Pullara, Sreekumar K; Rajeshkannan, R; Unnikrishnan, Ambika G

2012-01-01

Hypo-pituitarism results from impaired production of one or more of anterior pituitary trophic hormones. A rare cause of hypo-pituitarism is pituitary stalk transection syndrome. The MRI features of this condition in children and its association with hormonal deficiencies have been reported earlier. Reports on adults with this disorder are scarce, with only one small case series published in the recent literature. We studied the hormonal deficiency pattern and MRI findings of 12 patients with pituitary stalk transection syndrome who presented to our department between 2004 and 2011. Six patients were children and six were adults (≥18 years). This article compares the adult clinico-radiological phenotype of pituitary transection syndrome with the pediatric group of patients with same condition

Precision of systematic and random sampling in clustered populations: habitat patches and aggregating organisms.

Science.gov (United States)

McGarvey, Richard; Burch, Paul; Matthews, Janet M

2016-01-01

Natural populations of plants and animals spatially cluster because (1) suitable habitat is patchy, and (2) within suitable habitat, individuals aggregate further into clusters of higher density. We compare the precision of random and systematic field sampling survey designs under these two processes of species clustering. Second, we evaluate the performance of 13 estimators for the variance of the sample mean from a systematic survey. Replicated simulated surveys, as counts from 100 transects, allocated either randomly or systematically within the study region, were used to estimate population density in six spatial point populations including habitat patches and Matérn circular clustered aggregations of organisms, together and in combination. The standard one-start aligned systematic survey design, a uniform 10 x 10 grid of transects, was much more precise. Variances of the 10 000 replicated systematic survey mean densities were one-third to one-fifth of those from randomly allocated transects, implying transect sample sizes giving equivalent precision by random survey would need to be three to five times larger. Organisms being restricted to patches of habitat was alone sufficient to yield this precision advantage for the systematic design. But this improved precision for systematic sampling in clustered populations is underestimated by standard variance estimators used to compute confidence intervals. True variance for the survey sample mean was computed from the variance of 10 000 simulated survey mean estimates. Testing 10 published and three newly proposed variance estimators, the two variance estimators (v) that corrected for inter-transect correlation (ν₈ and ν(W)) were the most accurate and also the most precise in clustered populations. These greatly outperformed the two "post-stratification" variance estimators (ν₂ and ν₃) that are now more commonly applied in systematic surveys. Similar variance estimator performance rankings were found with

Characterization of dendritic morphology and neurotransmitter phenotype of thoracic descending propriospinal neurons after complete spinal cord transection and GDNF treatment

Science.gov (United States)

Deng, Lingxiao; Ruan, Yiwen; Chen, Chen; Frye, Christian Corbin; Xiong, Wenhui; Jin, Xiaoming; Jones, Kathryn; Sengelaub, Dale; Xu, Xiao-Ming

2016-01-01

After spinal cord injury (SCI), poor regeneration of damaged axons of the central nervous system (CNS) causes limited functional recovery. This limited spontaneous functional recovery has been attributed, to a large extent, to the plasticity of propriospinal neurons, especially the descending propriospinal neurons (dPSNs). Compared with the supraspinal counterparts, dPSNs have displayed significantly greater regenerative capacity, which can be further enhanced by glial cell line-derived neurotrophic factor (GDNF). In the present study, we applied a G-mutated rabies virus (G-Rabies) co-expressing green fluorescence protein (GFP) to reveal Golgi-like dendritic morphology of dPSNs. We also investigated the neurotransmitters expressed by dPSNs after labeling with a retrograde tracer Fluoro-Gold (FG). dPSNs were examined in animals with sham injuries or complete spinal transections with or without GDNF treatment. Bilateral injections of G-Rabies and FG were made into the 2nd lumbar (L2) spinal cord at 3 days prior to a spinal cord transection performed at the 11th thoracic level (T11). The lesion gap was filled with Gelfoam containing either saline or GDNF in the injury groups. Four days post-injury, the rats were sacrificed for analysis. For those animals receiving G-rabies injection, the GFP signal in the T7–9 spinal cord was visualized via 2-photon microscopy. Dendritic morphology from stack images was traced and analyzed using a Neurolucida software. We found that dPSNs in sham injured animals had a predominantly dorsal-ventral distribution of dendrites. Transection injury resulted in alterations in the dendritic distribution with dorsal-ventral retraction and lateral-medial extension. Treatment with GDNF significantly increased the terminal dendritic length of dPSNs. The density of spine-like structures was increased after injury, and treatment with GDNF enhanced this effect. For the group receiving FG injections, immunohistochemistry for glutamate, choline

Correlation of prostaglandin E2 concentrations in synovial fluid with ground reaction forces and clinical variables for pain or inflammation in dogs with osteoarthritis induced by transection of the cranial cruciate ligament.

Science.gov (United States)

Trumble, Troy N; Billinghurst, R Clark; McIlwraith, C Wayne

2004-09-01

To evaluate the temporal pattern of prostaglandin (PG) E2 concentrations in synovial fluid after transection of the cranial cruciate ligament (CCL) in dogs and to correlate PGE2 concentrations with ground reaction forces and subjective clinical variables for lameness or pain. 19 purpose-bred adult male Walker Hounds. Force plate measurements, subjective clinical analysis of pain or lameness, and samples of synovial fluid were obtained before (baseline) and at various time points after arthroscopic transection of the right CCL. Concentrations of PGE2 were measured in synovial fluid samples, and the PGE2 concentrations were correlated with ground reaction forces and clinical variables. The PGE2 concentration increased significantly above the baseline value throughout the entire study, peaking 14 days after transection. Peak vertical force and vertical impulse significantly decreased by day 14 after transection, followed by an increase over time without returning to baseline values. All clinical variables (eg, lameness, degree of weight bearing, joint extension, cumulative pain score, effusion score, and total protein content of synovial fluid, except for WBC count in synovial fluid) increased significantly above baseline values. Significant negative correlations were detected between PGE2 concentrations and peak vertical force (r, -0.5720) and vertical impulse (r, -0.4618), and significant positive correlations were detected between PGE2 concentrations and the subjective lameness score (r, 0.5016) and effusion score (r, 0.6817). Assessment of the acute inflammatory process by measurement of PGE2 concentrations in synovial fluid may be correlated with the amount of pain or lameness in dogs.

Estimating diurnal primate densities using distance sampling ...

African Journals Online (AJOL)

SARAH

2016-03-31

Mar 31, 2016 ... In the second session, we used 10 transect adjusted to transect (Grid 17 ... session transect was visited 20 times while at the second session transect ... probability, the density of the group and the group size of each species ...

Seismic structure from multi-channel seismic reflection and wide-angle data of Transect 0E in the Southern Gulf of California

Science.gov (United States)

Paramo, P.; Holbrook, W.; Brown, H.; Lizarralde, D.; Fletcher, J.; Umhoefer, P.; Kent, G.; Harding, A.; Gonzalez, A.; Axen, G.

2005-12-01

We present a velocity model from wide-angle data along with coincident prestack depth migration sections from seismic reflection data collected in the southern Gulf of California. Transect 0E runs NE to SW from the hills of Sierra Madre in mainland Mexico near Mazatlan to approximately 115 km into Gulf of California waters. Wide-angle data were recorded by 9 ocean bottom seismometers, deployed by the R/V New Horizon and 10 Reftek seismometers located along onshore extension of the transect. The average spacing for the OBS and Refteks is ~12 km and shots were fired from the R/V Maurice Ewing at 150 m intervals. Transect 0E crosses what it is believed to be extended continental crust and lies in the initial direction of extension characteristic of the proto-gulf. Preliminary results from the velocity model show upper crustal velocities of 6.1-6.3 km/s and lower crustal velocities of 6.7-7.0 km/s along the entire transect. Seismic velocities and crustal thicknesses observed along transect 0E are characteristic of non-volcanic margins.

Development of a New Microextraction Fiber Combined to On-Line Sample Stacking Capillary Electrophoresis UV Detection for Acidic Drugs Determination in Real Water Samples

Science.gov (United States)

Araujo, Lilia; Prieto, Avismelsi; Navalón, Alberto; Vílchez, José Luis; Valera, Paola; Zambrano, Ana; Dugas, Vincent

2017-01-01

A new analytical method coupling a (off-line) solid-phase microextraction with an on-line capillary electrophoresis (CE) sample enrichment technique was developed for the analysis of ketoprofen, naproxen and clofibric acid from water samples, which are known as contaminants of emerging concern in aquatic environments. New solid-phase microextraction fibers based on physical coupling of chromatographic supports onto epoxy glue coated needle were studied for the off-line preconcentration of these micropollutants. Identification and quantification of such acidic drugs were done by capillary zone electrophoresis (CZE) using ultraviolet diode array detection (DAD). Further enhancement of concentration sensitivity detection was achieved by on-line CE “acetonitrile stacking” preconcentration technique. Among the eight chromatographic supports investigated, Porapak Q sorbent showed higher extraction and preconcentration capacities. The screening of parameters that influence the microextraction process was carried out using a two-level fractional factorial. Optimization of the most relevant parameters was then done through a surface response three-factor Box-Behnken design. The limits of detection and limits of quantification for the three drugs ranged between 0.96 and 1.27 µg∙L−1 and 2.91 and 3.86 µg∙L−1, respectively. Recovery yields of approximately 95 to 104% were measured. The developed method is simple, precise, accurate, and allows quantification of residues of these micropollutants in Genil River water samples using inexpensive fibers. PMID:28686186

Development of a New Microextraction Fiber Combined to On-Line Sample Stacking Capillary Electrophoresis UV Detection for Acidic Drugs Determination in Real Water Samples

Directory of Open Access Journals (Sweden)

Maria Espina-Benitez

2017-07-01

Full Text Available A new analytical method coupling a (off-line solid-phase microextraction with an on-line capillary electrophoresis (CE sample enrichment technique was developed for the analysis of ketoprofen, naproxen and clofibric acid from water samples, which are known as contaminants of emerging concern in aquatic environments. New solid-phase microextraction fibers based on physical coupling of chromatographic supports onto epoxy glue coated needle were studied for the off-line preconcentration of these micropollutants. Identification and quantification of such acidic drugs were done by capillary zone electrophoresis (CZE using ultraviolet diode array detection (DAD. Further enhancement of concentration sensitivity detection was achieved by on-line CE “acetonitrile stacking” preconcentration technique. Among the eight chromatographic supports investigated, Porapak Q sorbent showed higher extraction and preconcentration capacities. The screening of parameters that influence the microextraction process was carried out using a two-level fractional factorial. Optimization of the most relevant parameters was then done through a surface response three-factor Box-Behnken design. The limits of detection and limits of quantification for the three drugs ranged between 0.96 and 1.27 µg∙L−1 and 2.91 and 3.86 µg∙L−1, respectively. Recovery yields of approximately 95 to 104% were measured. The developed method is simple, precise, accurate, and allows quantification of residues of these micropollutants in Genil River water samples using inexpensive fibers.

Development of a New Microextraction Fiber Combined to On-Line Sample Stacking Capillary Electrophoresis UV Detection for Acidic Drugs Determination in Real Water Samples.

Science.gov (United States)

Espina-Benitez, Maria; Araujo, Lilia; Prieto, Avismelsi; Navalón, Alberto; Vílchez, José Luis; Valera, Paola; Zambrano, Ana; Dugas, Vincent

2017-07-07

A new analytical method coupling a (off-line) solid-phase microextraction with an on-line capillary electrophoresis (CE) sample enrichment technique was developed for the analysis of ketoprofen, naproxen and clofibric acid from water samples, which are known as contaminants of emerging concern in aquatic environments. New solid-phase microextraction fibers based on physical coupling of chromatographic supports onto epoxy glue coated needle were studied for the off-line preconcentration of these micropollutants. Identification and quantification of such acidic drugs were done by capillary zone electrophoresis (CZE) using ultraviolet diode array detection (DAD). Further enhancement of concentration sensitivity detection was achieved by on-line CE "acetonitrile stacking" preconcentration technique. Among the eight chromatographic supports investigated, Porapak Q sorbent showed higher extraction and preconcentration capacities. The screening of parameters that influence the microextraction process was carried out using a two-level fractional factorial. Optimization of the most relevant parameters was then done through a surface response three-factor Box-Behnken design. The limits of detection and limits of quantification for the three drugs ranged between 0.96 and 1.27 µg∙L -1 and 2.91 and 3.86 µg∙L -1 , respectively. Recovery yields of approximately 95 to 104% were measured. The developed method is simple, precise, accurate, and allows quantification of residues of these micropollutants in Genil River water samples using inexpensive fibers.

Combined pancreatic and duodenal transection injury: A case report

OpenAIRE

Mungazi, Simbarashe Gift; Mbanje, Chenesa; Chihaka, Onesai; Madziva, Noah

2017-01-01

Introduction: Combined pancreatic-duodenal injuries in blunt abdominal trauma are rare. These injuries are associated with high morbidity and mortality, and their emergent management is a challenge. Case presentation: We report a case of combined complete pancreatic (through the neck) and duodenal (first part) transections in a 24-year-old male secondary to blunt abdominal trauma following a motor vehicle crash. The duodenal stumps were closed separately and a gastrojejunostomy performed f...

A feasibility study of a PET/MRI insert detector using strip-line and waveform sampling data acquisition.

Science.gov (United States)

Kim, H; Chen, C-T; Eclov, N; Ronzhin, A; Murat, P; Ramberg, E; Los, S; Wyrwicz, Alice M; Li, Limin; Kao, C-M

2015-06-01

We are developing a time-of-flight Positron Emission Tomography (PET) detector by using silicon photo-multipliers (SiPM) on a strip-line and high speed waveform sampling data acquisition. In this design, multiple SiPMs are connected on a single strip-line and signal waveforms on the strip-line are sampled at two ends of the strip to reduce readout channels while fully exploiting the fast time response of SiPMs. In addition to the deposited energy and time information, the position of the hit SiPM along the strip-line is determined by the arrival time difference of the waveform. Due to the insensitivity of the SiPMs to magnetic fields and the compact front-end electronics, the detector approach is highly attractive for developing a PET insert system for a magnetic resonance imaging (MRI) scanner to provide simultaneous PET/MR imaging. To investigate the feasibility, experimental tests using prototype detector modules have been conducted inside a 9.4 Tesla small animal MRI scanner (Bruker BioSpec 94/30 imaging spectrometer). On the prototype strip-line board, 16 SiPMs (5.2 mm pitch) are installed on two strip-lines and coupled to 2 × 8 LYSO scintillators (5.0 × 5.0 × 10.0 mm 3 with 5.2 mm pitch). The outputs of the strip-line boards are connected to a Domino-Ring-Sampler (DRS4) evaluation board for waveform sampling. Preliminary experimental results show that the effect of interference on the MRI image due to the PET detector is negligible and that PET detector performance is comparable with the results measured outside the MRI scanner.

Fungiform taste bud degeneration in C57BL/6J mice following chorda-lingual nerve transection.

Science.gov (United States)

Guagliardo, Nick A; Hill, David L

2007-09-10

Taste buds are dependent on innervation for normal morphology and function. Fungiform taste bud degeneration after chorda tympani nerve injury has been well documented in rats, hamsters, and gerbils. The current study examines fungiform taste bud distribution and structure in adult C57BL/6J mice from both intact taste systems and after unilateral chorda-lingual nerve transection. Fungiform taste buds were visualized and measured with the aid of cytokeratin 8. In control mice, taste buds were smaller and more abundant on the anterior tip (taste buds were smaller and fewer on the side of the tongue ipsilateral to the transection and continued to decrease in both size and number until 15 days posttransection. Degenerating fungiform taste buds were smaller due to a loss of taste bud cells rather than changes in taste bud morphology. While almost all taste buds disappeared in more posterior fungiform papillae by 15 days posttransection, the anterior tip of the tongue retained nearly half of its taste buds compared to intact mice. Surviving taste buds could not be explained by an apparent innervation from the remaining intact nerves. Contralateral effects of nerve transection were also observed; taste buds were larger due to an increase in the number of taste bud cells. These data are the first to characterize adult mouse fungiform taste buds and subsequent degeneration after unilateral nerve transection. They provide the basis for more mechanistic studies in which genetically engineered mice can be used. (c) 2007 Wiley-Liss, Inc.

Mid-IR Properties of an Unbiased AGN Sample of the Local Universe. 1; Emission-Line Diagnostics

Science.gov (United States)

Weaver, K. A.; Melendez, M.; Muhotzky, R. F.; Kraemer, S.; Engle, K.; Malumuth. E.; Tueller, J.; Markwardt, C.; Berghea, C. T.; Dudik, R. P.;

Sample size effect on the determination of the irreversibility line of high-Tc superconductors

International Nuclear Information System (INIS)

Li, Q.; Suenaga, M.; Li, Q.; Freltoft, T.

1994-01-01

The irreversibility lines of a high-J c superconducting Bi 2 Sr 2 Ca 2 Cu 3 O x /Ag tape were systematically measured upon a sequence of subdivisions of the sample. The irreversibility field H r (T) (parallel to the c axis) was found to change approximately as L 0.13 , where L is the effective dimension of the superconducting tape. Furthermore, it was found that the irreversibility line for a grain-aligned Bi 2 Sr 2 Ca 2 Cu 3 O x specimen can be approximately reproduced by the extrapolation of this relation down to a grain size of a few tens of micrometers. The observed size effect could significantly obscure the real physical meaning of the irreversibility lines. In addition, this finding surprisingly indicated that the Bi 2 Sr 2 Ca 2 Cu 2 O x /Ag tape and grain-aligned specimen may have similar flux line pinning strength

Deciphering the Correlation between Breast Tumor Samples and Cell Lines by Integrating Copy Number Changes and Gene Expression Profiles

Directory of Open Access Journals (Sweden)

Yi Sun

2015-01-01

Full Text Available Breast cancer is one of the most common cancers with high incident rate and high mortality rate worldwide. Although different breast cancer cell lines were widely used in laboratory investigations, accumulated evidences have indicated that genomic differences exist between cancer cell lines and tissue samples in the past decades. The abundant molecular profiles of cancer cell lines and tumor samples deposited in the Cancer Cell Line Encyclopedia and The Cancer Genome Atlas now allow a systematical comparison of the breast cancer cell lines with breast tumors. We depicted the genomic characteristics of breast primary tumors based on the copy number variation and gene expression profiles and the breast cancer cell lines were compared to different subgroups of breast tumors. We identified that some of the breast cancer cell lines show high correlation with the tumor group that agrees with previous knowledge, while a big part of them do not, including the most used MCF7, MDA-MB-231, and T-47D. We presented a computational framework to identify cell lines that mostly resemble a certain tumor group for the breast tumor study. Our investigation presents a useful guide to bridge the gap between cell lines and tumors and helps to select the most suitable cell line models for personalized cancer studies.

Duodenal Transection without Pancreatic Injury following Blunt Abdominal Trauma

OpenAIRE

Bankar, Sanket Subhash; Gosavi, Vikas S.; Hamid, Mohd.

2014-01-01

With the inventions of faster cars and even more faster motorbikes there is a worldwide increase in road traffic accidents, which has increased the incidence of blunt abdominal trauma but still duodenal injury following a blunt abdominal trauma is uncommon and can pose a formidable challenge to the surgeon and failure to manage it properly can result in devastating results. It may typically occur in isolation or with pancreatic injury. Here, we report a case of an isolated transection of the ...

Validation of a Sampling Method to Collect Exposure Data for Central-Line-Associated Bloodstream Infections.

Science.gov (United States)

Hammami, Naïma; Mertens, Karl; Overholser, Rosanna; Goetghebeur, Els; Catry, Boudewijn; Lambert, Marie-Laurence

2016-05-01

Surveillance of central-line-associated bloodstream infections requires the labor-intensive counting of central-line days (CLDs). This workload could be reduced by sampling. Our objective was to evaluate the accuracy of various sampling strategies in the estimation of CLDs in intensive care units (ICUs) and to establish a set of rules to identify optimal sampling strategies depending on ICU characteristics. Analyses of existing data collected according to the European protocol for patient-based surveillance of ICU-acquired infections in Belgium between 2004 and 2012. CLD data were reported by 56 ICUs in 39 hospitals during 364 trimesters. We compared estimated CLD data obtained from weekly and monthly sampling schemes with the observed exhaustive CLD data over the trimester by assessing the CLD percentage error (ie, observed CLDs - estimated CLDs/observed CLDs). We identified predictors of improved accuracy using linear mixed models. When sampling once per week or 3 times per month, 80% of ICU trimesters had a CLD percentage error within 10%. When sampling twice per week, this was >90% of ICU trimesters. Sampling on Tuesdays provided the best estimations. In the linear mixed model, the observed CLD count was the best predictor for a smaller percentage error. The following sampling strategies provided an estimate within 10% of the actual CLD for 97% of the ICU trimesters with 90% confidence: 3 times per month in an ICU with >650 CLDs per trimester or each Tuesday in an ICU with >480 CLDs per trimester. Sampling of CLDs provides an acceptable alternative to daily collection of CLD data.

On-line immunoaffinity column-liquid chromatography-tandem mass spectrometry method for trace analysis of diuron in wastewater treatment plant effluent sample.

Science.gov (United States)

Zhang, Xiuli; Martens, Dieter; Krämer, Petra M; Kettrup, Antonius A; Liang, Xinmiao

2006-11-10

An on-line immunoaffinity column with liquid chromatography/tandem mass spectrometry (IAC-LC-MS/MS) method for the determination of diuron in water matrices was described. This method used a sol-gel immunoaffinity column (20 mm x 4 mm I.D.) for on-line sample cleanup and enrichment, a monolithic analytical column (100 mm x 4.6 mm I.D.) for separation, and a triple quadrupole mass spectrometer for quantitation. The major challenges for the on-line set-up were discussed. The optimized on-line protocol was emphasized by the fact that low limit of quantitation (LOQ) of 1.0 ng/L was achieved with only 2.5-mL sample. In addition, a satisfactory accuracy ( approximately 90% of recovery) and precision (effect, the on-line IAC-LC-MS/MS analysis method can reliably determine diuron in wastewater treatment plant effluent sample.

Postoperative Airway Emergency following Accidental Flexometallic Tube Transection

Directory of Open Access Journals (Sweden)

Karim Habib MR

2015-10-01

Full Text Available Endotracheal intubation using flexometallic tubes are often required in anaesthesia practice for a variety of reasons. It is preferred in the head and neck region surgeries due to its relative resistance to kinking forces. At times, these patients postoperatively may need to be shifted to ICU or HDU without extubation for further stabilization/management and extubation after adequate recovery. We present an unusual accident where a new flexometallic endotracheal tube was permanently tapered, transected and migrated proximally due to patient’s bite on tube leading to airway emergency in post-operative recovery period.

Relative humidity effects on water vapour fluxes measured with closed-path eddy-covariance systems with short sampling lines

DEFF Research Database (Denmark)

Fratini, Gerardo; Ibrom, Andreas; Arriga, Nicola

2012-01-01

It has been formerly recognised that increasing relative humidity in the sampling line of closed-path eddy-covariance systems leads to increasing attenuation of water vapour turbulent fluctuations, resulting in strong latent heat flux losses. This occurrence has been analyzed for very long (50 m...... from eddy-covariance systems featuring short (4 m) and very short (1 m) sampling lines running at the same clover field and show that relative humidity effects persist also for these setups, and should not be neglected. Starting from the work of Ibrom and co-workers, we propose a mixed method...... and correction method proposed here is deemed applicable to closed-path systems featuring a broad range of sampling lines, and indeed applicable also to passive gases as a special case. The methods described in this paper are incorporated, as processing options, in the free and open-source eddy...

MOLLUSCA' BIODIVERSITY (GASTROPODA AND BIVALVIA AS A BIO INDICATOR OF QUALITY OF WATER IN THE COASTAL ISLAND OF TUNDA ISLAND, BANTEN

Directory of Open Access Journals (Sweden)

Indria Wahyuni

2017-07-01

Full Text Available The research has been done on Juli 2017 in the coastal region of Tunda Island. This study aims to determine the Biodiversity of Mollusca (Gastropoda and Bivalvia As Bioindicator of Water Quality In Coastal Area of Tunda Island, Banten. Sampling consists of 2 observation stations, namely the mangrove coastal area (3 transects and the seagrass coastal area (2 transects determined by purposive sampling. The observation of each station is done by using the quadratic transect method with 100 m transect line distance, and in each transect line there are 5 observation plots measuring 1m2 x 1m2. The data analysis includes density, biodiversity, bio-indicators of water quality based on diversity index. Result of research on 5 transect found 45 type Mollusca which represent 2 class, that is Gastropoda class of 29 species Gastropoda joined in 14 Family. As for Bivalvia class found 16 species incorporated in 9 families. The total density of Mollusca is 541.2 ind / m2 which consists of 392.4 ind / m2 for Gastropoda class and 148.8 ind / m2 for Bivalvia class. Mollusca diversity was calculated using the diversity index of Shannon-Wienner (H '. The results of diversity index ranged from 3.1356 - 3.3314 with high category. Bioindicator of aquatic quality using diversity index indicates that the coastal area of Tunda Island belongs to a very mildly polluted category.

A system for on-line monitoring of light element concentration distributions in thin samples

NARCIS (Netherlands)

Brands, P.J.M.; Mutsaers, P.H.A.; Voigt, de M.J.A.

1999-01-01

At the Cyclotron Laboratory, a scanning proton microprobe is used to determine concentration distributions in biomedical samples. The data acquired in these measurements used to be analysed in a time consuming off-line analysis. To avoid the loss of valuable measurement and analysis time, DYANA was

Conduction of impulses by axons regenerated in a Schwann cell graft in the transected adult rat thoracic spinal cord.

Science.gov (United States)

Pinzon, A; Calancie, B; Oudega, M; Noga, B R

2001-06-01

Central nervous system axons regenerate into a Schwann cell implant placed in the transected thoracic spinal cord of an adult rat. The present study was designed to test whether these regenerated axons are capable of conducting action potentials. Following the transection and removal of a 4- to 5-mm segment of the thoracic spinal cord (T8-T9), a polymer guidance channel filled with a mixture of adult rat Schwann cells and Matrigel was grafted into a 4- to 5-mm-long gap in the transected thoracic spinal cord. The two cut ends of the spinal cord were eased into the guidance channel openings. Transected control animals received a channel containing Matrigel only. Three months after implantation, electrophysiological studies were performed. Tungsten microelectrodes were used for monopolar stimulation of regenerated axons within the Schwann cell graft. Glass microelectrodes were used to record responses in the spinal cord rostral to the stimulation site. Evoked responses to electrical stimulation of the axon cable were found in two out of nine Schwann cell-grafted animals. These responses had approximate latencies in the range of those of myelinated axons. No responses were seen in any of the Matrigel-grafted animals. Histological analysis revealed that the two cases that showed evoked potentials had the largest number of myelinated axons present in the cable. This study demonstrates that axons regenerating through Schwann cell grafts in the complete transected spinal cord can produce measurable evoked responses following electrical stimulation. Copyright 2001 Wiley-Liss, Inc.

Liver trauma and transection of the inferior vena cava

International Nuclear Information System (INIS)

Radin, D.R.

1992-01-01

CT of a child with severe liver trauma due to a seat belt injury demonstrated avulsion of a portion of the lateral segment of the left lobe of the liver. The location of nondependent extravasated contrast material aided in identification of the visceral fracture site (the sentinel contrast sign). Associated transection of the inferior vena cava was evidenced by hypoatenuating zones adjacent to all the major hepatic veins and vena cava (hepatic perivenous tracking). Recognition of these two signs is important so that the radiologist can help the surgeon select the optimal operative approach. (orig.)

Transection of the inferior vena cava from blunt thoracic trauma: case reports.

Science.gov (United States)

Peitzman, A B; Udekwu, A O; Pevec, W; Albrink, M

1989-04-01

Blunt thoracic trauma is a frequent cause of death in multiple trauma victims. Myocardial rupture may occur in up to 65% of patients who die with thoracic injuries. Two cases are presented with intrapericardial transection of the inferior vena cava, pericardial rupture, and myocardial rupture from blunt thoracic trauma. Both patients died.

Influence of Electrical and Electromagnetic Stimulation on Nerve Regeneration in the Transected Mouse Sciatic Nerve : An Electron Microscopic Study

OpenAIRE

Ogata, Akiko; Matsumoto, Tomoko; Matsubara, Takako; Miki, Akinori

2001-01-01

Influence of electrical and electromagnetic stimulation on nerve regeneration was electron microscopically examined in the transected mouse sciatic nerve. Two days after the transection, several thin regenerating axons (daughter axons) were observed between the myelin sheath and basal lamina of Schwann cells in the proximal stump. Growth cones of the daughter axons contained several small round vesicles and mitochondria, and the shaft of them, neurofilaments, neurotubules and profiles of smoo...

Repair of the transected spinal cord at different stages of development in the North American opossum, Didelphis virginiana.

Science.gov (United States)

Terman, J R; Wang, X M; Martin, G F

2000-12-01

When the thoracic spinal cord is transected on postnatal day (PD) 5 in the North American opossum, descending and ascending axons grow through the lesion site. When the lesion is made on PD20, comparable growth is limited to a subset of descending axons. To better understand the mechanisms underlying these differences, we analyzed the transection site at different times after lesioning at both ages. Axons which crossed the lesion site could be identified using silver impregnation and immunostaining for neurofilament. Nissl stains revealed that abnormal appearing grey matter was also present in some of the PD5 cases. In many PD5 cases, however, and in all of the animals transected at PD20, grey matter was not present at the lesion site. Immunostaining with a neuron specific antibody supported that conclusion. However, immunostaining with phenotypic specific antibodies revealed that glial cells were present in all cases. Immunostaining for Schwann cells was negative. Fibronectin-positive cells were also present at the lesion site after transection of the thoracic cord at PD20, but their identity was uncertain. When injections of bromodeoxyuridine (BrdU), a thymidine analog, were made at different times after lesioning and the pups were sacrificed for BrdU immunohistochemistry up to 40 days later, labeled cells were found in the tissue which bridged the lesion site indicating that cell proliferation contributed to reconstruction at the lesion site.

Addressing sampling bias in counting forest birds: a West African ...

African Journals Online (AJOL)

Addressing sampling bias in counting forest birds: a West African case study. ... result may occur because of the noise they may introduce into the analysis. ... used at all; and for all transects to reach their mid-point at the same time each day, ...

Hidden Broad Line Seyfert 2 Galaxies in the CfA and 12micron Samples

OpenAIRE

Tran, Hien D.

2001-01-01

We report the results of a spectropolarimetric survey of the CfA and 12micron samples of Seyfert 2 galaxies (S2s). Polarized (hidden) broad line regions (HBLRs) are confirmed in a number of galaxies, and several new cases (F02581-1136, MCG -3-58-7, NGC 5995, NGC 6552, NGC 7682) are reported. The 12micron S2 sample shows a significantly higher incidence of HBLR (50%) than its CfA counterpart (30%), suggesting that the latter may be incomplete in hidden AGNs. Compared to the non-HBLR S2s, the H...

Structural remodeling of the heart and its premotor cardioinhibitory vagal neurons following T(5) spinal cord transection.

Science.gov (United States)

Lujan, Heidi L; Janbaih, Hussein; DiCarlo, Stephen E

2014-05-01

Midthoracic spinal cord injury (SCI) is associated with enhanced cardiac sympathetic activity and reduced cardiac parasympathetic activity. The enhanced cardiac sympathetic activity is associated with sympathetic structural plasticity within the stellate ganglia, spinal cord segments T1-T4, and heart. However, changes to cardiac parasympathetic centers rostral to an experimental SCI are relatively unknown. Importantly, reduced vagal activity is a predictor of high mortality. Furthermore, this autonomic dysregulation promotes progressive left ventricular (LV) structural remodeling. Accordingly, we hypothesized that midthoracic spinal cord injury is associated with structural plasticity in premotor (preganglionic parasympathetic neurons) cardioinhibitory vagal neurons located within the nucleus ambiguus as well as LV structural remodeling. To test this hypothesis, dendritic arborization and morphology (cholera toxin B immunohistochemistry and Sholl analysis) of cardiac projecting premotor cardioinhibitory vagal neurons located within the nucleus ambiguus were determined in intact (sham transected) and thoracic level 5 transected (T5X) rats. In addition, LV chamber size, wall thickness, and collagen content (Masson trichrome stain and structural analysis) were determined. Midthoracic SCI was associated with structural changes within the nucleus ambiguus and heart. Specifically, following T5 spinal cord transection, there was a significant increase in cardiac parasympathetic preganglionic neuron dendritic arborization, soma area, maximum dendritic length, and number of intersections/animal. This parasympathetic structural remodeling was associated with a profound LV structural remodeling. Specifically, T5 spinal cord transection increased LV chamber area, reduced LV wall thickness, and increased collagen content. Accordingly, results document a dynamic interaction between the heart and its parasympathetic innervation.

Accelerated axon outgrowth, guidance, and target reinnervation across nerve transection gaps following a brief electrical stimulation paradigm.

Science.gov (United States)

Singh, Bhagat; Xu, Qing-Gui; Franz, Colin K; Zhang, Rumi; Dalton, Colin; Gordon, Tessa; Verge, Valerie M K; Midha, Rajiv; Zochodne, Douglas W

2012-03-01

Regeneration of peripheral nerves is remarkably restrained across transection injuries, limiting recovery of function. Strategies to reverse this common and unfortunate outcome are limited. Remarkably, however, new evidence suggests that a brief extracellular electrical stimulation (ES), delivered at the time of injury, improves the regrowth of motor and sensory axons. In this work, the authors explored and tested this ES paradigm, which was applied proximal to transected sciatic nerves in mice, and identified several novel and compelling impacts of the approach. Using thy-1 yellow fluorescent protein mice with fluorescent axons that allow serial in vivo tracking of regeneration, the morphological, electrophysiological, and behavioral indices of nerve regrowth were measured. The authors show that ES is associated with a 30%-50% improvement in several indices of regeneration: regrowth of axons and their partnered Schwann cells across transection sites, maturation of regenerated fibers in gaps spanning transection zones, and entry of axons into their muscle and cutaneous target zones. In parallel studies, the authors analyzed adult sensory neurons and their response to extracellular ES while plated on a novel microelectrode array construct designed to deliver the identical ES paradigm used in vivo. The ES accelerated neurite outgrowth, supporting the concept of a neuron-autonomous mechanism of action. Taken together, these results support a robust role for brief ES following peripheral nerve injuries in promoting regeneration. Electrical stimulation has a wider repertoire of impact than previously recognized, and its impact in vitro supports the hypothesis that a neuron-specific reprogrammed injury response is recruited by the ES protocol.

Combined pancreatic and duodenal transection injury: A case report.

Science.gov (United States)

Mungazi, Simbarashe Gift; Mbanje, Chenesa; Chihaka, Onesai; Madziva, Noah

2017-01-01

Combined pancreatic-duodenal injuries in blunt abdominal trauma are rare. These injuries are associated with high morbidity and mortality, and their emergent management is a challenge. We report a case of combined complete pancreatic (through the neck) and duodenal (first part) transections in a 24-year-old male secondary to blunt abdominal trauma following a motor vehicle crash. The duodenal stumps were closed separately and a gastrojejunostomy performed for intestinal continuity. The transacted head of pancreas main duct was suture ligated and parenchyma was over sewn and buttressed with omentum. The edge of the body and tail pancreatic segment was freshened and an end to side pancreatico-jejunostomy was fashioned. A drain was left in situ. Post operatively the patient developed a pancreatic fistula which resolved with conservative management. After ten months of follow up the patient was well and showed no signs and symptoms of pancreatic insufficiency. Lengthy, complex procedures in pancreatic injuries have been associated with poor outcomes. Distal pancreatectomy or Whipple's procedure for trauma are viable options for complete pancreatic transections. But when there is concern that the residual proximal pancreatic tissue is inadequate to provide endocrine or exocrine function, preservation of the pancreatic tissue distal to the injury becomes an option. Combined pancreatic and duodenal injuries are rare and often fatal. Early identification, resuscitation and surgical intervention is warranted. Because of the large number of possible combinations of injuries to the pancreas and duodenum, no one form of therapy is appropriate for all patients. Copyright © 2017 The Authors. Published by Elsevier Ltd.. All rights reserved.

Electroacupuncture and Acupuncture Promote the Rat’s Transected Median Nerve Regeneration

OpenAIRE

Ho, C. Y.; Yao, C. H.; Chen, W. C.; Shen, W. C.; Bau, D. T.

2013-01-01

Background. Acupuncture and electroacupuncture treatments of damaged nerves may aid nerve regeneration related to hindlimb function, but the effects on the forelimb-related median nerve were not known. Methods. A gap was made in the median nerve of each rat by suturing the stumps into silicone rubber tubes. The influences of acupuncture and electroacupuncture treatments on transected median nerve regeneration were evaluated from morphological, electrophysiological, and functional angles. Resu...

The Sidi Ifni transect across the rifted margin of Morocco (Central Atlantic): Vertical movements constrained by low-temperature thermochronology

Science.gov (United States)

Charton, Rémi; Bertotti, Giovanni; Arantegui, Angel; Bulot, Luc

2018-05-01

The occurrence of km-scale exhumations during syn- and post-rift stages has been documented along Atlantic continental margins, which are also characterised by basins undergoing substantial subsidence. The relationship between the exhuming and subsiding domains is poorly understood. In this study, we reconstruct the evolution of a 50 km long transect across the Moroccan rifted margin from the western Anti-Atlas to the Atlantic basin offshore the city of Sidi Ifni. Low-temperature thermochronology data from the Sidi Ifni area document a ca. 8 km exhumation between the Permian and the Early/Middle Jurassic. The related erosion fed sediments to the subsiding Mesozoic basin to the NW. Basement rocks along the transect were subsequently buried by 1-2 km between the Late Jurassic and the Early Cretaceous. From late Early/Late Cretaceous onwards, rocks present along the transect were exhumed to their present-day position.

True coincidence summing correction determination for 214Bi principal gamma lines in NORM samples

International Nuclear Information System (INIS)

Haddad, Kh.

2014-01-01

The gamma lines 609.3 and 1,120.3 keV are two of the most intensive γ emissions of 214 Bi, but they have serious true coincidence summing (TCS) effects due to the complex decay schemes with multi-cascading transitions. TCS effects cause inaccurate count rate and hence erroneous results. A simple and easy experimental method for determination of TCS correction of 214 Bi gamma lines was developed in this work using naturally occurring radioactive material samples. Height efficiency and self attenuation corrections were determined as well. The developed method has been formulated theoretically and validated experimentally. The corrections problems were solved simply with neither additional standard source nor simulation skills. (author)

On-line combination of liquid chromatography and capillary gas chromatography : preconcentration and analysis of organic compounds in aqueous samples

NARCIS (Netherlands)

Noij, T.H.M.; Weiss, E.; Herps, T.; Cruchten, van H.; Rijks, J.A.

1988-01-01

This paper describes the design of a new, versatile, and low-cost on-line LC-GC interface that allows the fast and reliable introduction of large sample volumes onto a capillary GC column. The sample introduction procedure consists successively of: evaporation of the entire sample (LC fraction),

Benthic data from rapid assessment transects, 2001-2004, in the Hawaiian Islands (NODC Accession 0002464)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — This dataset consists of CRAMP Rapid Assessment Transect surveys taken in 2001-2004 and includes quantitative estimates of substrate type and species. The types and...

Pacific Islands Coral Reef Ecosystems Division (CRED) Rapid Ecological Assessment (REA) algae species lists (NODC Accession 0010352)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Quadrats were sampled along consecutively placed transect lines as part of Rapid Ecological Assessments conducted at sites in American Pacific Islands: CRED REA...

Postherniotomy dysejaculation: successful treatment with mesh removal and nerve transection

DEFF Research Database (Denmark)

Aasvang, Eske Kvanner; Kehlet, H.

2008-01-01

Dysejaculation following groin hernia repair can occur in about 1-2% of patients, resulting in impairment of sexual function. We report a case of chronic postherniotomy dysejaculation treated with transection of the ilioinguinal and iliohypogastric nerves and decompression of vas deferens...... that was embedded and twisted in shrunken mesh and scar tissue. At three months follow-up, there was reduced overall pain and no dysejaculation, and quantitative sensory testing showed reversal of sensory abnormalities, except for sensory loss, compared with preoperative values Udgivelsesdato: 2008/12...

[Urethroplasty with transection of urethral orifice and preservation and lengthening of urethral plate: highly applicable to the treatment of hypospadias].

Science.gov (United States)

Wang, Wen-Min; Qiu, Wei-Feng; Qian, Chong

2010-07-01

To explore the feasibility of urethroplasty with transection of the urethral orifice and preservation and lengthening of the urethral plate in the treatment of hypospadias. Forty-eight patients with hypospadias (18 of the coronal type, 21 the penile type, 8 the penoscrotal type and 1 the perineal type) underwent urethroplasty with transection of the urethral orifice and preservation and lengthening of the urethral plate. The surgical effects were observed by following up the patients for 3-27 months. One-stage surgical success was achieved in 44 of the cases, with satisfactory functional and cosmetic results but no complications. Two cases developed urinary fistula and another 2 urethral stricture, but all cured by the second surgery. Urethroplasty with transection of the urethral orifice and preservation and lengthening of the urethral plate is a simple, safe and effective surgical procedure for the treatment of hypospadias.

Relationship of fish indices with sampling effort and land use change in a large Mediterranean river.

Science.gov (United States)

Almeida, David; Alcaraz-Hernández, Juan Diego; Merciai, Roberto; Benejam, Lluís; García-Berthou, Emili

2017-12-15

Fish are invaluable ecological indicators in freshwater ecosystems but have been less used for ecological assessments in large Mediterranean rivers. We evaluated the effects of sampling effort (transect length) on fish metrics, such as species richness and two fish indices (the new European Fish Index EFI+ and a regional index, IBICAT2b), in the mainstem of a large Mediterranean river. For this purpose, we sampled by boat electrofishing five sites each with 10 consecutive transects corresponding to a total length of 20 times the river width (European standard required by the Water Framework Directive) and we also analysed the effect of sampling area on previous surveys. Species accumulation curves and richness extrapolation estimates in general suggested that species richness was reasonably estimated with transect lengths of 10 times the river width or less. The EFI+ index was significantly affected by sampling area, both for our samplings and previous data. Surprisingly, EFI+ values in general decreased with increasing sampling area, despite the higher observed richness, likely because the expected values of metrics were higher. By contrast, the regional fish index was not dependent on sampling area, likely because it does not use a predictive model. Both fish indices, but particularly the EFI+, decreased with less forest cover percentage, even within the smaller disturbance gradient in the river type studied (mainstem of a large Mediterranean river, where environmental pressures are more general). Although the two fish-based indices are very different in terms of their development, methodology, and metrics used, they were significantly correlated and provided a similar assessment of ecological status. Our results reinforce the importance of standardization of sampling methods for bioassessment and suggest that predictive models that use sampling area as a predictor might be more affected by differences in sampling effort than simpler biotic indices. Copyright �

Seismic imaging along a 600 km transect of the Alaska Subduction zone (Invited)

Science.gov (United States)

Calkins, J. A.; Abers, G. A.; Freymueller, J. T.; Rondenay, S.; Christensen, D. H.

2010-12-01

We present earthquake locations, scattered wavefield migration images, and phase velocity maps from preliminary analysis of combined seismic data from the Broadband Experiment Across the Alaska Range (BEAAR) and Multidisciplinary Observations of Onshore Subduction (MOOS) projects. Together, these PASSCAL broadband arrays sampled a 500+ km transect across a portion of the subduction zone characterized by the Yakutat terrane/Pacific plate boundary in the downgoing plate, and the Denali volcanic gap in the overriding plate. These are the first results from the MOOS experiment, a 34-station array that was deployed from 2006-2008 to fill in the gap between the TACT offshore refraction profile (south and east of the coastline of the Kenai Peninsula), and the BEAAR array (spanning the Alaska Range between Talkeetna and Fairbanks). 2-D images of the upper 150 km of the subduction zone were produced by migrating forward- and back-scattered arrivals in the coda of P waves from large teleseismic earthquakes, highlighting S-velocity perturbations from a smoothly-varying background model. The migration images reveal a shallowly north-dipping low velocity zone that is contiguous near 20 km depth on its updip end with previously obtained images of the subducting plate offshore. The low velocity zone steepens further to the north, and terminates near 120 km beneath the Alaska Range. We interpret this low velocity zone to be the crust of the downgoing plate, and the reduced seismic velocities to be indicative of hydrated gabbroic compositions. Earthquakes located using the temporary arrays and nearby stations of the Alaska Regional Seismic Network correlate spatially with the inferred subducting crust. Cross-sections taken along nearly orthogonal strike lines through the MOOS array reveal that both the dip angle and the thickness of the subducting low velocity zone change abruptly across a roughly NNW-SSE striking line drawn through the eastern Kenai Peninsula, coincident with a

A system for on-line monitoring of light element concentration distributions in thin samples

Energy Technology Data Exchange (ETDEWEB)

Brands, P.J.M. E-mail: p.j.m.brands@tue.nl; Mutsaers, P.H.A.; Voigt, M.J.A. de

1999-09-02

At the Cyclotron Laboratory, a scanning proton microprobe is used to determine concentration distributions in biomedical samples. The data acquired in these measurements used to be analysed in a time consuming off-line analysis. To avoid the loss of valuable measurement and analysis time, DYANA was developed. DYANA is an on-line method for the analysis of data from biomedical measurements. By using a database of background shapes, light elements such as Na and Mg, can be fitted even more precisely than in conventional fitting procedures. The entire analysis takes only several seconds and is performed while the acquisition system is gathering a new subset of data. Data acquisition must be guaranteed and may not be interfered by other parallel processes. Therefore, the analysis, the data acquisition and the experiment control is performed on a PCI-based Pentium personal computer (PC), running a real-time operating system. A second PC is added to run a graphical user interface for interaction with the experimenter and the monitoring of the analysed results. The system is here illustrated using atherosclerotic tissue but is applicable to all kinds of thin samples.

Importance of designated thoracic trauma surgeons in the management of traumatic aortic transection.

Science.gov (United States)

Albrink, M H; Rodriguez, E; England, G J; McKeown, P P; Hurst, J M; Rosemurgy, A S

1994-04-01

The medical literature is replete with reports on traumatic aortic transection. These reports have delineated many factors regarding the morbidity and high mortality of this ominous injury. Most reports are reviews of the collective experience of a single institution over a period of years. It is likely that many authors writing on the subject of traumatic aortic transection have no experience with operative repair of the lesion. There has been debate about the various techniques of primary repair versus graft insertion, as well as the question of whether cardiopulmonary bypass is superior to the "clamp and sew" methods. No studies have directly examined the skills of individual surgeons with respect to outcome. We present the results of a study from a university-affiliated level I trauma center in which the outcomes from various groups of surgeons were compared over a 5-year period. The information in this study strongly suggests that designated thoracic trauma surgeons who are promptly available and have dedicated interests in trauma patients achieve better results.

Changes of amino acid concentrations in the rat vestibular nuclei after inferior cerebellar peduncle transection.

Science.gov (United States)

Sun, Yizhe; Godfrey, Donald A; Godfrey, Timothy G; Rubin, Allan M

2007-02-15

Although there is a close relationship between the vestibular nuclear complex (VNC) and the cerebellum, little is known about the contribution of cerebellar inputs to amino acid neurotransmission in the VNC. Microdissection of freeze-dried brain sections and high-performance liquid chromatography (HPLC) were combined to measure changes of amino acid concentrations within the VNC of rats following transection of the cerebellovestibular connections in the inferior cerebellar peduncle. Distributions of 12 amino acids within the VNC at 2, 4, 7, and 30 days after surgery were compared with those for control and sham-lesioned rats. Concentrations of gamma-aminobutyric acid (GABA) decreased by 2 days after unilateral peduncle transection in nearly all VNC regions on the lesioned side and to lesser extents on the unlesioned side and showed partial recovery up to 30 days postsurgery. Asymmetries between the two sides of the VNC were maintained through 30 days. Glutamate concentrations were reduced bilaterally in virtually all regions of the VNC by 2 days and showed complete recovery in most VNC regions by 30 days. Glutamine concentrations increased, starting 2 days after surgery, especially on the lesioned side, so that there was asymmetry generally opposite that of glutamate. Concentrations of taurine, aspartate, and glycine also underwent partially reversible changes after peduncle transection. The results suggest that GABA and glutamate are prominent neurotransmitters in bilateral projections from the cerebellum to the VNC and that amino acid metabolism in the VNC is strongly influenced by its cerebellar connections.

Effect of stifle angle on the magnitude of the tibial plateau angle measurement in dogs with intact and transected cranial cruciate ligament. A cadaveric study.

Science.gov (United States)

Aulakh, K S; Harper, T A M; Lanz, O I; Daniel, G B; Werre, S R

2011-01-01

To determine the effect of stifle angle on the magnitude of the radiographic tibial plateau angle (TPA) in normal and cranial cruciate ligament (CCL) -deficient stifles. Three pairs of canine cadaver hindlimbs from three skeletally mature dogs were positioned in a custom-made positioning device. A lateral radiograph of each specimen was obtained before and after transection of the CCL at four stifle angles (90°, 110°, 135° and 140-150° [i.e. maximum extension]), based on goniometric measurements. Four observers determined the radiographic TPA twice for each radiograph with a minimum of two days between each measurement. The radiographic TPA measurements in all specimens at different stifle angles with intact CCL and transected CCL were compared with mixed-model ANOVA. The effect of stifle angle, CCL transection, and interaction between the two on observer TPA measurement variability was also determined using the coefficient of variation. Tibial plateau angle was not statistically different in the stifle angles for either the intact or transected CCL. There was also no statistical difference for TPA between intact and transected CCL groups at each of the stifle angles. Stifle angle, CCL transection and interaction between the two did not have any significant effect for intra-observer and inter-observer variation. The angle of the stifle during radiography does not influence the magnitude of the TPA measurement as determined on true lateral radiographs of the stifle and tibia in cadaveric canine limbs.

[Tachistoscope and dichotic listening test of the subject after the transection of the posterior part of the corpus callosum].

Science.gov (United States)

Watanabe, S; Tasaki, H; Hojo, K; Yoshimura, I; Sato, T; Nakaoka, T; Iwabuchi, T

1982-06-01

The authors made neuropsychological studies by the tachistoscope and the dichotic listening test on a subject who had undergone the transection of the posterior part of the corpus callosum. As to the tachistoscopic recognition, stimulus material was composed with the various Japanese letters (Katakana, Hiragana, Kanji), various faces (variations of the eyebrow form and the mouth form) and various slopes of line. Table 1 shows results of the cases (the subject was the present case, subjects 1 and subject 2 were past cases). It was seen that the performance of the subject on Japanese letters tasks showed greater right visual field superiority than the one of subject 1 and subject 2. As to the auditory recognition, the tasks used for the dichotic listening test were the following (Table 2, 3, 4). Different digits (three pairs) of the subject showed greater right ear superiority (right ear: 61.1, left ear 5.9) than the ones of subject 1 and subject 2.

Simulating forest productivity along a neotropical elevational transect: temperature variation and carbon use efficiency

Science.gov (United States)

Marthews, T.; Malhi, Y.; Girardin, C.; Silva-Espejo, J.; Aragão, L.; Metcalfe, D.; Rapp, J.; Mercado, L.; Fisher, R.; Galbraith, D.; Fisher, J.; Salinas-Revilla, N.; Friend, A.; Restrepo-Coupe, N.; Williams, R.

2012-04-01

A better understanding of the mechanisms controlling the magnitude and sign of carbon components in tropical forest ecosystems is important for reliable estimation of this important regional component of the global carbon cycle. We used the JULES vegetation model to simulate all components of the carbon balance at six sites along an Andes-Amazon transect across Peru and Brazil and compared the results to published field measurements. In the upper montane zone the model predicted a vegetation dieback, indicating a need for better parameterisation of cloud forest vegetation. In the lower montane and lowland zones simulated ecosystem productivity and respiration were predicted with reasonable accuracy, although not always within the error bounds of the observations. Model-predicted carbon use efficiency in this transect surprisingly did not increase with elevation, but remained close to the 'temperate' value 0.5. This may be explained by elevational changes in the balance between growth and maintenance respiration within the forest canopy, as controlled by both temperature- and pressure-mediated processes.

Automatic data acquisition and on-line analysis of trace element concentration in serum samples

International Nuclear Information System (INIS)

Lecomte, R.; Paradis, P.; Monaro, S.

1978-01-01

A completely automated system has been developed to determine the trace element concentration in biological samples by measuring charged particle induced X-rays. A CDC-3100 computer with ADC and CAMAC interface is employed to control the data collection apparatus, acquire data and perform simultaneously the analysis. The experimental set-up consists of a large square plexiglass chamber in which a commercially available 750H Kodak Carousel is suitably arranged as a computer controlled sample changer. A method of extracting trace element concentrations using reference spectra is presented and an on-line program has been developed to easily and conveniently obtain final results at the end of each run. (Auth.)

Ureteric transection secondary to penetrating handlebar injury

Directory of Open Access Journals (Sweden)

K.P. Debbink

2017-08-01

Full Text Available Ureteric trauma is rare, occurring in <1% of all traumas. We present a unique case of a 13 year old female who sustained a penetrating abdominal injury from a bicycle handlebar. Upon initial examination there was herniation of bowel through the abdominal wound, so exploratory laparotomy was performed. A serosal injury of the colon and bleeding mesenteric veins were encountered; the retroperitoneum was not explored at that time. Postoperative course was remarkable for a doubling of the serum creatinine, increasing abdominal distention and pain. Computed tomography on postoperative day five demonstrated a large amount of intra-abdominal fluid. The patient was taken for re-exploration. The left ureter was found to be completely transected. It was repaired over a double-J stent. This case demonstrates the need for a high index of suspicion in the diagnosis of ureteric injury. Keywords: Ureter, Bicycle, Handlebar, Penetrating

Comparison of Relative Bias, Precision, and Efficiency of Sampling Methods for Natural Enemies of Soybean Aphid (Hemiptera: Aphididae).

Science.gov (United States)

Bannerman, J A; Costamagna, A C; McCornack, B P; Ragsdale, D W

2015-06-01

Generalist natural enemies play an important role in controlling soybean aphid, Aphis glycines (Hemiptera: Aphididae), in North America. Several sampling methods are used to monitor natural enemy populations in soybean, but there has been little work investigating their relative bias, precision, and efficiency. We compare five sampling methods: quadrats, whole-plant counts, sweep-netting, walking transects, and yellow sticky cards to determine the most practical methods for sampling the three most prominent species, which included Harmonia axyridis (Pallas), Coccinella septempunctata L. (Coleoptera: Coccinellidae), and Orius insidiosus (Say) (Hemiptera: Anthocoridae). We show an important time by sampling method interaction indicated by diverging community similarities within and between sampling methods as the growing season progressed. Similarly, correlations between sampling methods for the three most abundant species over multiple time periods indicated differences in relative bias between sampling methods and suggests that bias is not consistent throughout the growing season, particularly for sticky cards and whole-plant samples. Furthermore, we show that sticky cards produce strongly biased capture rates relative to the other four sampling methods. Precision and efficiency differed between sampling methods and sticky cards produced the most precise (but highly biased) results for adult natural enemies, while walking transects and whole-plant counts were the most efficient methods for detecting coccinellids and O. insidiosus, respectively. Based on bias, precision, and efficiency considerations, the most practical sampling methods for monitoring in soybean include walking transects for coccinellid detection and whole-plant counts for detection of small predators like O. insidiosus. Sweep-netting and quadrat samples are also useful for some applications, when efficiency is not paramount. © The Authors 2015. Published by Oxford University Press on behalf of

First Case of Autonomic Dysreflexia Following Elective Lower Thoracic Spinal Cord Transection in a Spina Bifida Adult.

Science.gov (United States)

Garces, Juanita; Mathkour, Mansour; Scullen, Tyler; Kahn, Lora; Biro, Erin; Pham, Alex; Sulaiman, Olawale A R; Smith, Roger; Bui, Cuong J

2017-12-01

Spinal cord transection is a radical but effective treatment for highly selective cases of symptomatic spinal retethering in paraplegic spina bifida patients. Autonomic dysreflexia (AD) is a potentially life-threatening syndrome involving a dysregulated sympathetic discharge reflex commonly seen following cervical and high thoracic spinal cord injury, leading to a disconnect between autonomic pathways above and below the lesion that can lead to severe complications including uncontrolled hypertension, bradycardia, stroke, and potentially death. Herein we present a case in which a paraplegic spina bifida patient presenting with symptomatic spinal retethering experienced autonomic dysreflexia following an elective spinal cord transection. A 51-year-old male with a history of complex spina bifida presented with an active cerebrospinal fluid leak. Physical examination revealed a thin covering of abnormal epidermis over the large placode. Magnetic resonance imaging revealed a large myelomeningocele defect with posterior element defects spanning from L2 to the sacrum with evidence of tethering. The patient underwent an intradural transection of the spinal cord with a "blind-pouch" closure of the dura at the level of T12/L1. Postoperatively, the patient developed intermittent episodes of hypertension, bradycardia, headaches, altered mental status, severe perspiration, and red flushing of the upper torso, face, and arms. The diagnosis of AD was made clinically and managed with a positive response to a combination of beta- and alpha-blockade along with patient education on avoidance of common AD triggers. At 5-year follow-up the patient has continued to do well on medication. This case highlights a potential major side effect from elective transection of the spinal cord. If unrecognized and untreated, AD can cause significant distress and morbidity. We hope this first case report serves to supplement existing data and aid in future surgical and medical decision

THE CORES OF THE Fe Kα LINES IN ACTIVE GALACTIC NUCLEI: AN EXTENDED CHANDRA HIGH ENERGY GRATING SAMPLE

International Nuclear Information System (INIS)

Shu, X. W.; Wang, J. X.; Yaqoob, T.

2010-01-01

We extend the study of the core of the Fe Kα emission line at ∼6.4 keV in Seyfert galaxies reported by Yaqoob and Padmanabhan using a larger sample observed by the Chandra high-energy grating (HEG). The sample consists of 82 observations of 36 unique sources with z H 23 cm -2 ) Seyfert galaxies to date. From an empirical and uniform analysis, we present measurements of the Fe Kα line centroid energy, flux, equivalent width (EW), and intrinsic width (FWHM). The Fe Kα line is detected in 33 sources, and its centroid energy is constrained in 32 sources. In 27 sources, the statistical quality of the data is good enough to yield measurements of the FWHM. We find that the distribution in the line centroid energy is strongly peaked around the value for neutral Fe, with over 80% of the observations giving values in the range 6.38-6.43 keV. Including statistical errors, 30 out of 32 sources (∼94%) have a line centroid energy in the range 6.35-6.47 keV. The mean EW, among the observations in which a non-zero lower limit could be measured, was 53 ± 3 eV. The mean FWHM from the subsample of 27 sources was 2060 ± 230 km s -1 . The mean EW and FWHM are somewhat higher when multiple observations for a given source are averaged. From a comparison with the Hβ optical emission-line widths (or, for one source, Brα), we find that there is no universal location of the Fe Kα line-emitting region relative to the optical broad-line region (BLR). In general, a given source may have contributions to the Fe Kα line flux from parsec-scale distances from the putative black hole, down to matter a factor ∼2 closer to the black hole than the BLR. We confirm the presence of the X-ray Baldwin effect, an anti-correlation between the Fe Kα line EW and X-ray continuum luminosity. The HEG data have enabled isolation of this effect to the narrow core of the Fe Kα line.

CRED REA Algal Assessments at Tutuila, American Samoa (AS) in 2004

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Twelve quadrats were sampled along 2 consecutively-placed, 25m transect lines, as part of Rapid Ecological Assessments, conducted at 22 sites at Tutuila in the...

CRED REA Algal Assessments, Johnston Atoll 2006

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Twelve quadrats were sampled along 2 consecutively-placed, 25m transect lines as part of Rapid Ecological Assessments conducted at 17 sites at Johnston Atoll in...

CRED REA Algal Assessments, Gardner Pinnacles, Northwestern Hawaiian Islands 2004 (NODC Accession 0010352)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Twelve quadrats were sampled along 2 consecutively-placed, 25m transect lines as part of Rapid Ecological Assessments conducted at 3 sites at Gardner Pinnacles in...

CRED REA Algal Assessment, Aguijan 2003 (NODC Accession 0010352)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Twelve quadrats were sampled along 2 consecutively-placed, 25m transect lines as part of Rapid Ecological Assessments conducted at 2 sites at Aguijan in the...

CRED REA Algal Assessments, Johnston Atoll 2004 (NODC Accession 0010352)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Twelve quadrats were sampled along 2 consecutively-placed, 25m transect lines as part of Rapid Ecological Assessments conducted at 12 sites at Johnston Atoll in...

CRED REA Algal Assessment, Rota 2003 (NODC Accession 0010352)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Twelve quadrats were sampled along 2 consecutively-placed, 25m transect lines as part of Rapid Ecological Assessments conducted at 6 sites at Rota in the...

CRED REA Algal Assessment at Swains Island, American Samoa, 2004 (NODC Accession 0010352)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Twelve quadrats were sampled along 2 consecutively-placed, 25m transect lines as part of Rapid Ecological Assessments conducted at 8 sites at Swains Island in...

CRED REA Algal Assessment, Asuncion 2003 (NODC Accession 0010352)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Twelve quadrats were sampled along 2 consecutively-placed, 25m transect lines as part of Rapid Ecological Assessments conducted at 3sites at Asuncion in the...

CRED REA Algal Assessments at Alamagan, Marianas Archipelago in 2007

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Twelve quadrats were sampled along 2 consecutively-placed, 25m transect lines, as part of Rapid Ecological Assessments, conducted at 3 sites at Alamagan in the...

CRED REA Algal Assessments at Uracas (Farallon de Pajaros), Marianas Archipelago in 2007

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Twelve quadrats were sampled along 2 consecutively-placed, 25m transect lines, as part of Rapid Ecological Assessments, conducted at 3 sites at Uracas (Farallon de...

CRED REA Algal Assessment, Tinian 2003 (NODC Accession 0010352)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Twelve quadrats were sampled along 2 consecutively-placed, 25m transect lines as part of Rapid Ecological Assessments conducted at 2 sites at Tinian in the...

CRED REA Algal Assessments at Asuncion, Marianas Archipelago in 2007

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Twelve quadrats were sampled along 2 consecutively-placed, 25m transect lines, as part of Rapid Ecological Assessments, conducted at 3 sites at Asuncion in the...

CRED REA Algal Assessments at Sarigan Island, Marianas Archipelago in 2005

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — As part of Rapid Ecological Assessments (REA), Twelve quadrats were sampled along 2 consecutively-placed, 25m transect lines, conducted at 3 sites at Sarigan Island...

CRED REA Algal Assessments at Alamagan Island, Marianas Archipelago in 2005

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — As part of Rapid Ecological Assessments (REA), Twelve quadrats were sampled along 2 consecutively-placed, 25m transect lines, conducted at 3 sites at Alamagan Island...

CRED REA Algal Assessments at Saipan Island, Marianas Archipelago in 2005

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — As part of Rapid Ecological Assessments (REA), Twelve quadrats were sampled along 2 consecutively-placed, 25m transect lines, conducted at 8 sites at Saipan Island...

CRED REA Algal Assessments at Agrihan, Marianas Archipelago in 2007

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Twelve quadrats were sampled along 2 consecutively-placed, 25m transect lines, as part of Rapid Ecological Assessments, conducted at 3 sites at Agrihan in the...

CRED REA Algal Assessments at Guguan, Marianas Archipelago in 2007

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Twelve quadrats were sampled along 2 consecutively-placed, 25m transect lines, as part of Rapid Ecological Assessments, conducted at 3 sites at Guguan in the...

CRED REA Algal Assessment, Guguan 2003 (NODC Accession 0010352)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Twelve quadrats were sampled along 2 consecutively-placed, 25m transect lines as part of Rapid Ecological Assessments conducted at 3 sites at Guguan in the...

CRED REA Algal Assessment, Agrihan 2003 (NODC Accession 0010352)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Twelve quadrats were sampled along 2 consecutively-placed, 25m transect lines as part of Rapid Ecological Assessments conducted at 6 sites at Agrihan in the...

CRED REA Algal Assessments at Pathfinder Reef, Marianas Archipelago in 2005

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — As part of Rapid Ecological Assessments (REA), Twelve quadrats were sampled along 2 consecutively-placed, 25m transect lines, conducted at 2 sites at Pathfinder Reef...

CRED REA Algal Assessments at Tinian Island, Marianas Archipelago in 2005

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — As part of Rapid Ecological Assessments (REA), Twelve quadrats were sampled along 2 consecutively-placed, 25m transect lines, conducted at 6 sites at Tinian Island...

CRED REA Algal Assessments, French Frigate Shoals, Northwestern Hawaiian Islands 2002 (NODC Accession 0010352)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Twelve quadrats were sampled along 2 consecutively-placed, 25m transect lines as part of Rapid Ecological Assessments conducted at 12 sites at French Frigate Shoals...

CRED REA Algal Assessments at Tinian, Marianas Archipelago in 2007

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Twelve quadrats were sampled along 2 consecutively-placed, 25m transect lines, as part of Rapid Ecological Assessments, conducted at 5 sites at Tinian in the...

CRED REA Algal Assessment, Anatahan 2003 (NODC Accession 0010352)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Twelve quadrats were sampled along 2 consecutively-placed, 25m transect lines as part of Rapid Ecological Assessments conducted at 4 sites at Anatahan in the...

CRED REA Algal Assessments at Saipan, Marianas Archipelago in 2007

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Twelve quadrats were sampled along 2 consecutively-placed, 25m transect lines, as part of Rapid Ecological Assessments, conducted at 8 sites at Saipan in the...

CRED REA Algal Assessments at Sarigan, Marianas Archipelago in 2007

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Twelve quadrats were sampled along 2 consecutively-placed, 25m transect lines, as part of Rapid Ecological Assessments, conducted at 3 sites at Sarigan in the...

CRED REA Algal Assessments at Pearl and Hermes Atoll, NW Hawaiian Islands in 2006

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Twelve quadrats were sampled along 2 consecutively-placed, 25m transect lines, as part of Rapid Ecological Assessments, conducted at 13 sites at Pearl and Hermes...

Quantitative US Elastography Can Be Used to Quantify Mechanical and Histologic Tendon Healing in a Rabbit Model of Achilles Tendon Transection.

Science.gov (United States)

Yamamoto, Yohei; Yamaguchi, Satoshi; Sasho, Takahisa; Fukawa, Taisuke; Akatsu, Yorikazu; Akagi, Ryuichiro; Yamaguchi, Tadashi; Takahashi, Kenji; Nagashima, Kengo; Takahashi, Kazuhisa

2017-05-01

Purpose To determine the time-dependent change in strain ratios (SRs) at the healing site of an Achilles tendon rupture in a rabbit model of tendon transection and to assess the correlation between SRs and the mechanical and histologic properties of the healing tissue. Materials and Methods Experimental methods were approved by the institutional animal care and use committee. The Achilles tendons of 24 New Zealand white rabbits (48 limbs) were surgically transected. The SRs of Achilles tendons were calculated by using compression-based quantitative ultrasonographic elastography measurements obtained 2, 4, 8, and 12 weeks after transection. After in vivo elastography, the left Achilles tendon was harvested for mechanical testing of ultimate load, ultimate stress, elastic modulus, and linear stiffness, and the right tendons were harvested for tissue histologic analysis with the Bonar scale. Time-dependent changes in SRs, mechanical parameters, and Bonar scale scores were evaluated by using repeated-measures analysis of variance. The correlation between SRs and each measured variable was evaluated by using the Spearman rank correlation coefficient. Results Mean SRs and Bonar scale values decreased as a function of time after transection, whereas mechanical parameters increased (P tendon. © RSNA, 2017 Online supplemental material is available for this article.

Histological characteristics of ligament healing after bio-enhanced repair of the transected goat ACL

NARCIS (Netherlands)

Nguyen, D. Tan; Dellbrügge, Sietske; Tak, Paul P.; Woo, Savio L.-Y.; Blankevoort, Leendert; van Dijk, Niek C.

2015-01-01

Recently, healing of a ruptured anterior cruciate ligament (ACL) is reconsidered. In a previous study, we have shown that the transected ACL can heal after treatment with the triple X locking suture alone or combined with small intestine submucosa (SIS). The first research question of this study was

MID-INFRARED PROPERTIES OF THE SWIFT BURST ALERT TELESCOPE ACTIVE GALACTIC NUCLEI SAMPLE OF THE LOCAL UNIVERSE. I. EMISSION-LINE DIAGNOSTICS

International Nuclear Information System (INIS)

Weaver, K. A.; Melendez, M.; Mushotzky, R. F.; Kraemer, S.; Engle, K.; Malumuth, E.; Tueller, J.; Markwardt, C.; Berghea, C. T.; Dudik, R. P.; Winter, L. M.; Armus, L.

2010-01-01

We compare mid-infrared emission-line properties from high-resolution Spitzer spectra of a hard X-ray (14-195 keV) selected sample of nearby (z < 0.05) active galactic nuclei (AGNs) detected by the Burst Alert Telescope (BAT) aboard Swift. The luminosity distribution for the mid-infrared emission lines, [O IV] 25.89 μm, [Ne II] 12.81 μm, [Ne III] 15.56 μm, and [Ne V] 14.32/24.32 μm, and hard X-ray continuum show no differences between Seyfert 1 and Seyfert 2 populations; however, six newly discovered BAT AGNs are under-luminous in [O IV], most likely the result of dust extinction in the host galaxy. The overall tightness of the mid-infrared correlations and BAT fluxes and luminosities suggests that the emission lines primarily arise in gas ionized by the AGNs. We also compare the mid-infrared emission lines in the BAT AGNs with those from published studies of ULIRGs, Palomar-Green quasars, star-forming galaxies, and LINERs. We find that the BAT AGN sample falls into a distinctive region when comparing the [Ne III]/[Ne II] and the [O IV]/[Ne III] ratios. These line ratios are lower in sources that have been previously classified in the mid-infrared/optical as AGNs than those found for the BAT AGNs, suggesting that, in our X-ray selected sample, the AGNs represent the main contribution to the observed line emission. These ratios represent a new emission line diagnostic for distinguishing between AGNs and star-forming galaxies.

Diversity and distribution of hyperiid amphipods along a latitudinal transect in the Atlantic Ocean

Science.gov (United States)

Burridge, Alice K.; Tump, Marloes; Vonk, Ronald; Goetze, Erica; Peijnenburg, Katja T. C. A.

2017-11-01

As commensals and parasitoids of gelatinous plankton, hyperiid amphipods play unique and important ecological roles in pelagic food webs. Because the diversity and biogeography of this group in oceanic waters is poorly known, we examined diversity and distribution patterns of hyperiids along a basin-scale meridional transect in the Atlantic Ocean (Atlantic Meridional Transect cruise 22). Hyperiids were collected from epipelagic and upper mesopelagic depths at 27 stations between 39°N and 45°S. A total of 70 species in 36 genera and 17 families were identified, the majority of which belonged to the epipelagic Physocephalata infraorder. We observed maximum species and genus richness in the equatorial upwelling region (up to 35 species, 27 genera per station; 7°N-8°S), which appeared largely driven by increased diversity in the superfamily Platysceloidea, as well as a significant and positive relationship between species richness and sea surface temperature. Cluster analyses of hyperiid species assemblages along the transect broadly supported a division into gyral, equatorial, transitional, and subantarctic assemblages, congruent with Longhurst's biogeochemical provinces. Steepest transitions in hyperiid species composition occurred at the southern subtropical convergence zone (34-38°S). The majority of zooplankton groups show maximal diversity in subtropical waters, and our observations of equatorial maxima in species and genus richness for hyperiids suggest that the mechanisms controlling diversity in this group are distinct from other zooplanktonic taxa. These patterns may be driven by the distribution and diversity of gelatinous hosts for hyperiids, which remain poorly characterized at ocean basin scales. The data reported here provide new distributional records for epipelagic and upper mesopelagic hyperiids across six major oceanic provinces in the Atlantic Ocean.

A new technique for hepatic parenchymal transection using an articulating bipolar 5 cm radiofrequency device: results from the first 100 procedures.

Science.gov (United States)

Takahashi, Hideo; Akyuz, Muhammet; Aksoy, Erol; Aucejo, Federico; Quintini, Cristiano; Miller, Charles; Fung, John; Berber, Eren

2018-04-13

Parenchymal transection(PT) still remains a challenge in liver resection. The outcomes of the first experience of a novel vessel-sealer for hepatic transection were assessed. A bipolar articulating vessel-sealer (Caiman ® , Aesculap Inc., Center Valley, PA) was used in 100 liver resections through both open (OLR) and laparoscopic (LLR) approaches. All data were prospectively collected into an IRB-approved department database, and clinical, surgical and perioperative parameters were analyzed. Fifty patients underwent OLR and 50 patients underwent LLR. Eighty hepatectomies were performed for malignancy. Median number of tumors was 1, with the largest focus measuring an average of 5.1 cm. Forty-nine of the procedures were major liver resections. Parenchymal transection time was 29.9 ± 3.1 min in OLR and 29.9 ± 3.6 min in LLR. Median estimated blood loss was 300 cc (Inter-quartile range (IQR) 100-575 cc). Median hospital stay was 6 days for open and 3 days for laparoscopic procedures. Ninety-day complication rate was 8% without any mortality. Bile leak rate was 4%. Staplers were used for parenchymal transection in 16 cases. This study introduces a new multifunctional device into the armamentarium of the liver surgeon. In our experience, this device facilitated the parenchymal transection by adding speed and consolidating the amount of instrumentation used in liver resection without increasing complications. Copyright © 2018 International Hepato-Pancreato-Biliary Association Inc. Published by Elsevier Ltd. All rights reserved.

Retinal glutamate transporter changes in experimental glaucoma and after optic nerve transection in the rat.

Science.gov (United States)

Martin, Keith R G; Levkovitch-Verbin, Hana; Valenta, Danielle; Baumrind, Lisa; Pease, Mary Ellen; Quigley, Harry A

2002-07-01

High levels of glutamate can be toxic to retinal ganglion cells. Effective buffering of extracellular glutamate by retinal glutamate transporters is therefore important. This study was conducted to investigate whether glutamate transporter changes occur with two models of optic nerve injury in the rat. Glaucoma was induced in one eye of 35 adult Wistar rats by translimbal diode laser treatment to the trabecular meshwork. Twenty-five more rats underwent unilateral optic nerve transection. Two glutamate transporters, GLAST (EAAT-1) and GLT-1 (EAAT-2), were studied by immunohistochemistry and quantitative Western blot analysis. Treated and control eyes were compared 3 days and 1, 4, and 6 weeks after injury. Optic nerve damage was assessed semiquantitatively in epoxy-embedded optic nerve cross sections. Trabecular laser treatment resulted in moderate intraocular pressure (IOP) elevation in all animals. After 1 to 6 weeks of experimental glaucoma, all treated eyes had significant optic nerve damage. Glutamate transporter changes were not detected by immunohistochemistry. Western blot analysis demonstrated significantly reduced GLT-1 in glaucomatous eyes compared with control eyes at 3 days (29.3% +/- 6.7%, P = 0.01), 1 week (55.5% +/- 13.6%, P = 0.02), 4 weeks (27.2% +/- 10.1%, P = 0.05), and 6 weeks (38.1% +/- 7.9%, P = 0.01; mean reduction +/- SEM, paired t-tests, n = 5 animals per group, four duplicate Western blot analyses per eye). The magnitude of the reduction in GLT-1 correlated significantly with mean IOP in the glaucomatous eye (r(2) = 0.31, P = 0.01, linear regression). GLAST was significantly reduced (33.8% +/- 8.1%, mean +/- SEM) after 4 weeks of elevated IOP (P = 0.01, paired t-test, n = 5 animals per group). In contrast to glaucoma, optic nerve transection resulted in an increase in GLT-1 compared with the control eye (P = 0.01, paired t-test, n = 15 animals). There was no significant change in GLAST after transection. GLT-1 and GLAST were significantly

CRED REA Algal Assessments, Niihau, Main Hawaiian Islands, 2005 (NODC Accession 0010352)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Twelve quadrats were sampled along 2 consecutively-placed, 25m transect lines as part of Rapid Ecological Assessments conducted at 6 sites at Niihau in the Main...

AFSC/RACE/EcoFOCI: 2011 Chukchi Sea Cruise MB11-01/1MB11

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — A total of 64 stations were occupied along onshore-offshore transect lines from the Bering Strait to Barrow Canyon. At each station we sampled zooplankton using a...

CRED REA Algal Assessments, Pearl and Hermes Atoll, Northwestern Hawaiian Islands, 2002 (NODC Accession 0010352)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Twelve quadrats were sampled along 2 consecutively-placed, 25m transect lines as part of Rapid Ecological Assessments conducted at 14 sites at Pearl and Hermes Atoll...

CRED REA Algal Assessments, Laysan Island, Northwestern Hawaiian Islands 2002 (NODC Accession 0010352)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Twelve quadrats were sampled along 2 consecutively-placed, 25m transect lines as part of Rapid Ecological Assessments conducted at 3 sites at Laysan Island in the...

CRED REA Algal Assessments, Hawaii Island, Main Hawaiian Islands, 2005 (NODC Accession 0010352)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Twelve quadrats were sampled along 2 consecutively-placed, 25m transect lines as part of Rapid Ecological Assessments conducted at 19 sites at Hawaii Island in the...

CRED REA Algal Assessments at Baker Island, Pacific Remote Island Areas in 2008

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Twelve quadrats were sampled along 2 consecutively-placed, 25m transect lines, as part of Rapid Ecological Assessments, conducted at 1 site at Baker in the Pacific...

CRED REA Algal Assessments, Pearl and Hermes Atoll, Northwestern Hawaiian Islands 2003 (NODC Accession 0010352)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Twelve quadrats were sampled along 2 consecutively-placed, 25m transect lines as part of Rapid Ecological Assessments conducted at 15 sites at Pearl and Hermes Atoll...

CRED REA Algal Assessments, Howland Island 2006

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Twelve quadrats were sampled along 2 consecutively-placed, 25m transect lines as part of Rapid Ecological Assessments conducted at 4 sites at Howland Island in the...

CRED REA Algal Assessments at Necker, NW Hawaiian Islands in 2006

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Twelve quadrats were sampled along 2 consecutively-placed, 25m transect lines, as part of Rapid Ecological Assessments, conducted at 2 sites at Necker in the NW...

CRED REA Algal Assessments at Ofu and Olosega Islands, American Samoa, 2004 (NODC Accession 0010352)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Twelve quadrats were sampled along 2 consecutively-placed, 25m transect lines as part of Rapid Ecological Assessments conducted at 7 sites at Ofu and Olosega Islands...

CRED REA Algal Assessment, Santa Rosa Bank 2003 (NODC Accession 0010352)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Twelve quadrats were sampled along 2 consecutively-placed, 25m transect lines as part of Rapid Ecological Assessments conducted at 2 sites at Santa Rosa Bank (off...

CRED REA Algal Assessments, Necker Island, Northwestern Hawaiian Islands, 2002 (NODC Accession 0010352)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Twelve quadrats were sampled along 2 consecutively-placed, 25m transect lines as part of Rapid Ecological Assessments conducted at 1 site at Necker Island in the...

CRED REA Algal Assessment, Arakane Reef 2003 (NODC Accession 0010352)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Twelve quadrats were sampled along 2 consecutively-placed, 25m transect lines as part of Rapid Ecological Assessments conducted at 1 site at Arakane Reef in the...

CRED REA Algal Assessments, Lisianski Island, Northwestern Hawaiian Islands 2003 (NODC Accession 0010352)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Twelve quadrats were sampled along 2 consecutively-placed, 25m transect lines as part of Rapid Ecological Assessments conducted at 9 sites at Lisianski Island in the...

CRED REA Algal Assessments at Maug Island, Marianas Archipelago in 2005

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — As part of Rapid Ecological Assessments (REA), Twelve quadrats were sampled along 2 consecutively-placed, 25m transect lines, conducted at 9 sites at Maug Island in...

CRED REA Algal Assessments at Molokai, Main Hawaiian Islands in 2006

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Twelve quadrats were sampled along 2 consecutively-placed, 25m transect lines, as part of Rapid Ecological Assessments, conducted at 3 sites at Molokai in the Main...

CRED REA Algal Assessments at Hawaii, Main Hawaiian Islands in 2006

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Twelve quadrats were sampled along 2 consecutively-placed, 25m transect lines, as part of Rapid Ecological Assessments, conducted at 17 sites at Hawaii in the Main...

CRED REA Algal Assessments, Midway Atoll, Northwestern Hawaiian Islands 2003 (NODC Accession 0010352)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Twelve quadrats were sampled along 2 consecutively-placed, 25m transect lines as part of Rapid Ecological Assessments conducted at 9 sites at Midway Atoll in the...

CRED REA Algal Assessments at Maui, Main Hawaiian Islands in 2006

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Twelve quadrats were sampled along 2 consecutively-placed, 25m transect lines, as part of Rapid Ecological Assessments, conducted at 12 sites at Maui in the Main...

CRED REA Algal Assessments, Maro Reef, Northwestern Hawaiian Islands 2004 (NODC Accession 0010352)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Twelve quadrats were sampled along 2 consecutively-placed, 25m transect lines as part of Rapid Ecological Assessments conducted at 9 sites at Maro Reef in the...

CRED REA Algal Assessments at Lehua Rock, Main Hawaiian Islands in 2006

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Twelve quadrats were sampled along 2 consecutively-placed, 25m transect lines, as part of Rapid Ecological Assessments, conducted at 3 sites at Lehua Rock in the...

CRED REA Algal Assessments, Lisianski, Northwestern Hawaiian Islands 2004 (NODC Accession 0010352)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Twelve quadrats were sampled along 2 consecutively-placed, 25m transect lines as part of Rapid Ecological Assessments conducted at 9 sites at Lisianski Island in the...

CRED REA Algal Assessments Wake Atoll, 2007

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Twelve quadrats were sampled along 2 consecutively-placed, 25m transect lines as part of Rapid Ecological Assessments conducted at 12 sites at Wake Atoll in April...

CRED REA Algal Assessments at Kaula Rock, Main Hawaiian Islands in 2006

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Twelve quadrats were sampled along 2 consecutively-placed, 25m transect lines, as part of Rapid Ecological Assessments, conducted at 2 sites at Kaula Rock in the...

CRED REA Algal Assessments at Guam, Marianas Archipelago in 2007

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Twelve quadrats were sampled along 2 consecutively-placed, 25m transect lines, as part of Rapid Ecological Assessments, conducted at 10 sites at Guam in the Marianas...

CRED REA Algal Assessments, Kauai, Main Hawaiian Islands, 2005 (NODC Accession 0010352)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Twelve quadrats were sampled along 2 consecutively-placed, 25m transect lines as part of Rapid Ecological Assessments conducted at 12 sites at Kauai in the Main...

CRED REA Algal Assessments at Rota, Marianas Archipelago in 2007

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Twelve quadrats were sampled along 2 consecutively-placed, 25m transect lines, as part of Rapid Ecological Assessments, conducted at 6 sites at Rota in the Marianas...

CRED REA Algal Assessments at Laysan, NW Hawaiian Islands in 2006

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Twelve quadrats were sampled along 2 consecutively-placed, 25m transect lines, as part of Rapid Ecological Assessments, conducted at 3 sites at Laysan in the NW...

CRED REA Algal Assessments, Midway Atoll, Northwestern Hawaiian Islands 2004 (NODC Accession 0010352)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Twelve quadrats were sampled along 2 consecutively-placed, 25m transect lines as part of Rapid Ecological Assessments conducted at 9 sites at Midway Atoll in the...

CRED REA Algal Assessments, Lanai, Main Hawaiian Islands, 2005 (NODC Accession 0010352)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Twelve quadrats were sampled along 2 consecutively-placed, 25m transect lines as part of Rapid Ecological Assessments conducted at 6 sites at Lanai in the Main...

CRED REA Algal Assessments at Maug, Marianas Archipelago in 2007

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Twelve quadrats were sampled along 2 consecutively-placed, 25m transect lines, as part of Rapid Ecological Assessments, conducted at 9 sites at Maug in the Marianas...

The Kinematics of the Permitted C ii λ 6578 Line in a Large Sample of Planetary Nebulae

Energy Technology Data Exchange (ETDEWEB)

Richer, Michael G.; Suárez, Genaro; López, José Alberto; García Díaz, María Teresa, E-mail: richer@astrosen.unam.mx, E-mail: gsuarez@astro.unam.mx, E-mail: jal@astrosen.unam.mx, E-mail: tere@astro.unam.mx [Instituto de Astronomía, Universidad Nacional Autónoma de México, Ensenada, Baja California (Mexico)

2017-03-01

We present spectroscopic observations of the C ii λ 6578 permitted line for 83 lines of sight in 76 planetary nebulae at high spectral resolution, most of them obtained with the Manchester Echelle Spectrograph on the 2.1 m telescope at the Observatorio Astronómico Nacional on the Sierra San Pedro Mártir. We study the kinematics of the C ii λ 6578 permitted line with respect to other permitted and collisionally excited lines. Statistically, we find that the kinematics of the C ii λ 6578 line are not those expected if this line arises from the recombination of C{sup 2+} ions or the fluorescence of C{sup +} ions in ionization equilibrium in a chemically homogeneous nebular plasma, but instead its kinematics are those appropriate for a volume more internal than expected. The planetary nebulae in this sample have well-defined morphology and are restricted to a limited range in H α line widths (no large values) compared to their counterparts in the Milky Way bulge; both these features could be interpreted as the result of young nebular shells, an inference that is also supported by nebular modeling. Concerning the long-standing discrepancy between chemical abundances inferred from permitted and collisionally excited emission lines in photoionized nebulae, our results imply that multiple plasma components occur commonly in planetary nebulae.

Improving off-line accelerated tryptic digestion. Towards fast-lane proteolysis of complex biological samples.

Science.gov (United States)

Vukovic, Jadranka; Loftheim, Håvard; Winther, Bjørn; Reubsaet, J Léon E

2008-06-27

Off-line digestion of proteins using immobilized trypsin beads is studied with respect to the format of the digestion reactor, the digestion conditions, the comparison with in-solution digestion and its use in complex biological samples. The use of the filter vial as the most appropriate digestion reactor enables simple, efficient and easy-to-handle off-line digestion of the proteins on trypsin beads. It was shown that complex proteins like bovine serum albumin (BSA) need much longer time (89 min) and elevated temperature (37 degrees C) to be digested to an acceptable level compared to smaller proteins like cytochrome c (5 min, room temperature). Comparing the BSA digestion using immobilized trypsin beads with conventional in-solution digestion (overnight at 37 degrees C), it was shown that comparable results were obtained with respect to sequence coverage (>90%) and amount of missed cleavages (in both cases around 20 peptides with 1 or 2 missed cleavages were detected). However, the digestion using immobilized trypsin beads was considerable less time consuming. Good reproducibility and signal intensities were obtained for the digestion products of BSA in a complex urine sample. In addition to this, peptide products of proteins typically present in urine were identified.

Utility of Glissonean Pedicle Transection for Surgical Treatment of Severe Liver Trauma

Directory of Open Access Journals (Sweden)

Satoshi Koizumi

2017-04-01

Full Text Available The most common initial strategy for treatment of severe liver trauma is damage control in which hemostasis is achieved by perihepatic gauze packing and/or vascular embolization. However, we encounter patients in whom this strategy alone is not adequate. We have applied the principles of Glissonean pedicle transection, a technique that was originally devised to ensure safe and quick performance of planned hepatectomy for liver cancer, to 3 cases of severe liver trauma. We performed Glissonean pedicle ligation during damage control surgery in 2 patients and Glissonean pedicle transection during the definitive surgery in 1 patient. We describe the approaches and our experience with them, including operation times and outcomes. From our experience thus far, it seems that 8–12 h after the damage control procedure is appropriate for performing the definitive surgery. Although there are some problems posed by this strategy and cases to which it will not be applicable, the method seems to be particularly useful for cases of severe liver trauma in which the damage is extensive and involves the Glissonean pedicles near the hepatic hilus. We describe our 3 cases in detail and review our experience in light of the available literature.

Trends and perspectives of flow injection/sequential injection on-line sample-pretreatment schemes coupled to ETAAS

DEFF Research Database (Denmark)

Wang, Jianhua; Hansen, Elo Harald

2005-01-01

Flow injection (FI) analysis, the first generation of this technique, became in the 1990s supplemented by its second generation, sequential injection (SI), and most recently by the third generation (i.e.,Lab-on-Valve). The dominant role played by FI in automatic, on-line, sample pretreatments in ...

Marine tunicates from Sangkarang Archipelago Indonesia: recent finding and bio-prospecting

Science.gov (United States)

Litaay, Magdalena

2018-03-01

Tunicate belongs to urochordata that inhabit benthic area of coral reefs. This paper attempts to compile result of several studies on diversity of marine tunicates from Sangkarang Archipelago of South Sulawesi Indonesia. Method for tunicates sample collection was line transect method that applied at two 3 and 7 m depth. A 50 m line transect was applied parallel to a shore line in each depth and was done in duplicate. A 2.5 m plot was places side by side of transect, in which all tunicate inside plot was counted, identified, and photographed, respectively. Tunicates identification was based on morphological characteristics. The latest finding shows that eighteen species of tunicates were recorded in Samalona waters as also the same number of species in Barrang Caddi waters. The result from this finding was compared to previous studies done at other part of Sangkarang area. This study concluded that this archipelago is rich in tunicates and these resources can be utilized for various purposes. Bioprospect of marine tunicates is also discus in the present study.

CRED REA Algal Assessments, Kingman Reef 2004 (NODC Accession 0010352)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Twelve quadrats were sampled along 2 consecutively-placed, 25m transect lines as part of Rapid Ecological Assessments conducted at 9 sites at Kingman Reef in the US...

CRED REA Algal Assessments, Maui and Molokini Islet, Main Hawaiian Islands, 2005 (NODC Accession 0010352)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Twelve quadrats were sampled along 2 consecutively-placed, 25m transect lines as part of Rapid Ecological Assessments conducted at 9 sites at Maui Island and 3 sites...

CRED REA Algal Assessments, Baker Island 2004 (NODC Accession 0010352)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Twelve quadrats were sampled along 2 consecutively-placed, 25m transect lines as part of Rapid Ecological Assessments conducted at 6 sites at Baker Island in the US...

CRED REA Algal Assessments, Baker Island 2006

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Twelve quadrats were sampled along 2 consecutively-placed, 25m transect lines as part of Rapid Ecological Assessments conducted at 8 sites at Baker Island in the US...

CRED REA Algal Assessments at Maro Reef, NW Hawaiian Islands in 2006

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Twelve quadrats were sampled along 2 consecutively-placed, 25m transect lines, as part of Rapid Ecological Assessments, conducted at 9 sites at Maro Reef in the NW...

CRED REA Algal Assessments, Palmyra Atoll 2004 (NODC Accession 0010352)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Twelve quadrats were sampled along 2 consecutively-placed, 25m transect lines as part of Rapid Ecological Assessments conducted at 8 sites at Palmyra Atoll in the US...

CRED REA Algal Assessments, Kingman Reef 2006

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Twelve quadrats were sampled along 2 consecutively-placed, 25m transect lines as part of Rapid Ecological Assessments conducted at 15 sites at Kingman Reef in the US...

Macrophyte species distribution, indices of biotic integrity and sampling intensity in isolated Florida marshes

Science.gov (United States)

This study tested macrophyte condition metrics calculated after decreasing the effort and area of sampling by 33% to 66%, as tested in 74 emergent isolated wetlands. Four belted transects from wetland edge to center were established and rooted macrophytes were identified. The eff...

A contiguous-quadrat sampling exercise in a shrub-invaded ...

African Journals Online (AJOL)

In each quadrat, we recorded the species present and counted the number of woody alien plants. Chromolaena diminished under annual burning. Species richness and turnover increased in all transects over time. The 25m transect was as efficient as the 30m transect; however, the latter was influenced by an edge effect, ...

Using scaling factors for evaluating spatial and temporal variability of soil hydraulic properties within one elevation transect

Science.gov (United States)

Nikodem, Antonín; Kodešová, Radka; Jakšík, Ondřej; Fér, Miroslav; Klement, Aleš

2016-04-01

This study was carried out in Southern Moravia, in the Czech Republic. The original soil unit in the wider area is a Haplic Chernozem developed on loess. The intensive agricultural exploitation in combination with terrain morphology has resulted in a highly diversified soil spatial pattern. Nowadays the original soil unit is preserved only on top of relatively flat parts, and is gradually transformed by water erosion up to Regosols on the steepest slopes, while colluvial soils are formed in terrain depressions and at toe slopes due to sedimentation of previously eroded material. Soils within this area has been intensively investigated during the last several years (e.g. Jakšík et al., 2015; Vašát et al., 2014, 2015a,b). Soil sampling (disturbed and undisturbed 100-cm3 soil samples) was performed at 5 points of one elevation transect in November 2010 (after wheat sowing) and August 2011 (after wheat harvest). Disturbed soil samples were used to determine basic soil properties (grain size distribution and organic carbon content etc.). Undisturbed soil samples were used to determine the soil water retention curves and the hydraulic conductivity functions using the multiple outflow tests in Tempe cells and a numerical inversion with HYDRUS 1-D. Scaling factors (alpha-h for pressure head, alpha-theta for soil water contents and alpha-k for hydraulic conductivities) were used here to express soil hydraulic properties variability. Evaluated scaling factors reflected position within the elevation transect as well as time of soil sampling. In general large values of alpha-h, lower values of alpha-k and similar values of alpha-theta were obtained in 2010 in comparison to values obtained in 2011, which indicates development of soil structure during the vegetation season. Jakšík, O., Kodešová, R., Kubiš, A., Stehlíková, I., Drábek, O., Kapička, A. (2015): Soil aggregate stability within morphologically diverse areas. Catena, 127, 287-299. Vašát, R., Kode

Groundwater Dynamics along Forest-Marsh-Tidal Creek Transects in North Inlet Estuary, South Carolina: 1994-1996

Data.gov (United States)

Baruch Institute for Marine and Coastal Sciences, Univ of South Carolina — Ground water level elevations were collected every 10 to 15 days from piezometers stationed along three forest-marsh-tidal creek transects (B, C, and D) across the...

Determination of cobalt in biological samples by line-source and high-resolution continuum source graphite furnace atomic absorption spectrometry using solid sampling or alkaline treatment

International Nuclear Information System (INIS)

Ribeiro, Anderson Schwingel; Vieira, Mariana Antunes; Furtado da Silva, Alessandra; Borges, Daniel L. Gallindo; Welz, Bernhard; Heitmann, Uwe; Curtius, Adilson Jose

2005-01-01

Two procedures for the determination of Co in biological samples by graphite furnace atomic absorption spectrometry (GF AAS) were compared: solid sampling (SS) and alkaline treatment with tetramethylammonium hydroxide (TMAH) using two different instruments for the investigation: a conventional line-source (LS) atomic absorption spectrometer and a prototype high-resolution continuum source atomic absorption spectrometer. For the direct introduction of the solid samples, certified reference materials (CRM) were ground to a particle size ≤50 μm. Alkaline treatment was carried out by placing about 250 mg of the sample in polypropylene flasks, adding 2 mL of 25% m/v tetramethylammonium hydroxide and de-ionized water. Due to its unique capacity of providing a 3-D spectral plot, a high-resolution continuum source (HR-CS) graphite furnace atomic absorption spectrometry was used as a tool to evaluate potential spectral interferences, including background absorption for both sample introduction procedures, revealing that a continuous background preceded the atomic signal for pyrolysis temperatures lower than 700 deg. C. Molecular absorption bands with pronounced rotational fine structure appeared for atomization temperatures >1800 deg. C probably as a consequence of the formation of PO. After optimization had been carried out using high resolution continuum source atomic absorption spectrometry, the optimized conditions were adopted also for line-source atomic absorption spectrometry. Six biological certified reference materials were analyzed, with calibration against aqueous standards, resulting in agreement with the certified values (according to the t-test for a 95% confidence level) and in detection limits as low as 5 ng g -1

Spanish Moss as an atmospheric tracer for trace elements from fossil fuel burning power plants

International Nuclear Information System (INIS)

James, W.D.; Padaki, P.; McWilliams, E.L.

1991-01-01

Samples of Spanish Moss (Tillandsia usneoides) were analyzed by neutron activation analysis (NAA), inductively coupled argon plasma emission spectrometry (ICP), and x-ray fluorescence analysis (XRF) for trace elements as atmospheric environmental monitors. In particular, certain elements thought likely to be contributed to the atmosphere by combustion of fossil fuels were studied in samples collected along two transects, an east/west transect from the Louisiana line west to Dallas and a north/south transect from the Limestone electric Generating Station north to Dallas. Plants were sampled during peak electric generating periods in the summer, as well as following planned outages during the winter months. Se, As and several other volatile species known to concentrate in fly ash particles which are likely to escape power plant collection devices were shown to correlate with downwind directions of plant plumes. Attempts to determine levels of sulfur taken up by the plants which can be attributed to fossil fuel combustion through the use of these marker elements have also be made

[Sampling optimization for tropical invertebrates: an example using dung beetles (Coleoptera: Scarabaeinae) in Venezuela].

Science.gov (United States)

Ferrer-Paris, José Rafael; Sánchez-Mercado, Ada; Rodríguez, Jon Paul

2013-03-01

The development of efficient sampling protocols is an essential prerequisite to evaluate and identify priority conservation areas. There are f ew protocols for fauna inventory and monitoring in wide geographical scales for the tropics, where the complexity of communities and high biodiversity levels, make the implementation of efficient protocols more difficult. We proposed here a simple strategy to optimize the capture of dung beetles, applied to sampling with baited traps and generalizable to other sampling methods. We analyzed data from eight transects sampled between 2006-2008 withthe aim to develop an uniform sampling design, that allows to confidently estimate species richness, abundance and composition at wide geographical scales. We examined four characteristics of any sampling design that affect the effectiveness of the sampling effort: the number of traps, sampling duration, type and proportion of bait, and spatial arrangement of the traps along transects. We used species accumulation curves, rank-abundance plots, indicator species analysis, and multivariate correlograms. We captured 40 337 individuals (115 species/morphospecies of 23 genera). Most species were attracted by both dung and carrion, but two thirds had greater relative abundance in traps baited with human dung. Different aspects of the sampling design influenced each diversity attribute in different ways. To obtain reliable richness estimates, the number of traps was the most important aspect. Accurate abundance estimates were obtained when the sampling period was increased, while the spatial arrangement of traps was determinant to capture the species composition pattern. An optimum sampling strategy for accurate estimates of richness, abundance and diversity should: (1) set 50-70 traps to maximize the number of species detected, (2) get samples during 48-72 hours and set trap groups along the transect to reliably estimate species abundance, (3) set traps in groups of at least 10 traps to

Effects of climate and geochemistry on soil organic matter stabilization and greenhouse gas emissions along altitudinal transects in different mountain regions

Science.gov (United States)

Griepentrog, Marco; Bodé, Samuel; Boudin, Mathieu; Dercon, Gerd; Doetterl, Sebastian; Matulanya, Machibya; Msigwa, Anna; Vermeir, Pieter; Boeckx, Pascal

2017-04-01

Terrestrial ecosystems are strongly influenced by climate change and soils are key compartments of the global carbon (C) cycle in terms of their potential to store or release significant amounts of C. This study is part of the interregional IAEA Technical Cooperation Project ``Assessing the Impact of Climate Change and its Effects on Soil and Water Resources in Polar and Mountainous Regions (INT5153)'' aiming to improve the understanding of climate change impacts on soil organic carbon (SOC) in fragile polar and high mountainous ecosystems at local and global scale for their better management and conservation. The project includes 13 benchmark sites situated around the world. Here we present novel data from altitudinal transects of three different mountain regions (Mount Kilimanjaro, Tanzania; Mount Gongga, China; Cordillera Blanca, Peru). All altitudinal transects cover a wide range of natural ecosystems under different climates and soil geochemistry. Bulk soil samples (four field replicates per ecosystem) were subjected to a combination of aggregate and particle-size fractionation followed by organic C, total nitrogen, stable isotope (13C, 15N) and radiocarbon (14C) analyses of all fractions. Bulk soils were further characterized for their geochemistry (Na, K, Ca, Mg, Al, Fe, Mn, Si, P) and incubated for 63 days to assess greenhouse gas emissions (CO2, CH4, NO, N2O). Further, stable C isotopic signature of CO2 was measured to determine the isotopic signature of soil respiration (using Keeling plots) and to estimate potential respiration sources. The following four ecosystems were sampled at an altitudinal transect on the (wet) southern slopes of Mount Kilimanjaro: savannah (920m), lower montane rain forests with angiosperm trees (2020m), upper montane cloud forest with gymnosperm trees (2680m), subalpine heathlands (3660m). Both forests showed highest C contents followed by subalpine and savannah. The largest part of SOC was found in particulate organic matter

Blunt traumatic bronchial transection in a 28-month-old child

Directory of Open Access Journals (Sweden)

Sung Mi Hwang

2014-01-01

Full Text Available Tracheobronchial injury is uncommon in children, but may result in life-threatening conditions. We present a case of transection of the right intermediate bronchus, right middle lobe bronchus and right lower lobe bronchus in a 28-month-old child with blunt chest injury. The gold standard for diagnosis is tracheobronchoscopy, however, the bronchoscopy may not always be available for little children. For diagnosis in similar cases, a high index of suspicion should be needed based on symptoms, chest X-ray and computed tomography findings. In addition, anesthesiologists should be aware of this dangerous condition and must be fully prepared for rapid and appropriate management during operation.

Histological Changes in the Proximal and Distal Tendon Stumps Following Transection of Achilles Tendon in the Rabbits.

Science.gov (United States)

Al-Qattan, Mohammad M; Mawlana, Ola Helmi; Mohammed Ahmed, Raeesa Abdel-Twab; Hawary, Khalid

2016-05-01

To determine tendon stump changes following unrepaired Achilles tendon lacerations in an animal model. An experimental study. King Saud University, Riyadh, Saudi Arabia, from October 2013 to January 2014. Arabbit model was developed and studied tendon retraction and histological changes in the proximal and distal stumps following transection of the Achilles tendon. Over a period of 12 weeks, retraction of the distal tendon stump was minimal (2 - 3 mm). In contrast, retraction of the proximal tendon stump peaked to reach 6 mm at 4 weeks post-injury and plateaued to reach 7 - 8 mm at the 12-week interval. Following complete transection of the Achilles tendon, tendon retraction correlated with the density of myofibroblast expression within the tendon stump. Further research is needed to investigate the pathophysiology of these findings.

Erythropoietin improves place learning in fimbria-fornix-transected rats and modifies the search pattern of normal rats

DEFF Research Database (Denmark)

Mogensen, Jesper; Miskowiak, Kamilla; Sørensen, Thomas Alrik

2004-01-01

administration of EPO significantly improves the posttraumatic functional recovery of the presently studied place learning task after transections of the fimbria-fornix. Additionally, administration of EPO influences the strategy, although not quality, of task solution in normal (sham-operated) rats.......The acquisition of a water-maze-based allocentric place learning task was studied in four groups of rats: two groups subjected to bilateral transections of the fimbria-fornix and two groups undergoing a sham control operation. At the moment of surgery all animals were given one systemic......-associated impairment. The two sham-operated groups did not differ with respect to the proficiency of task acquisition. But administration of EPO to intact animals caused a significant modification of swim patterns-apparently reflecting a somewhat modified strategy of task solution. It is concluded that systemic...

Calibration of a degassing-emanation line for 222Rn determination in seawater samples; Calibracao de uma linha de emanacao para determinacao de {sup 222}Rn em amostras de agua do mar

Energy Technology Data Exchange (ETDEWEB)

Farias, Luciana Aparecida

2002-07-01

The purpose of this study is to calibrate a degassing-emanation line and to determine {sup 222}Rn and {sup 226}Ra activity concentrations in seawater samples. This methodology, also called Lucas method, consists in the extraction of radon (originally dissolved in seawater), collection of the gas in a liquid nitrogen cold trap and transfer from the trap to an alpha scintillation cell. Total extraction efficiencies of the 4 degassing-emanation systems were determined by measuring {sup 226}Ra reference solutions. The efficiencies obtained for these 4 systems varied from 21 % to 62%. This work also presents preliminary results of a study carried out in a series of small embayements of Ubatuba, Sao Paulo State-Brazil: Flamengo Bay, Fortaleza Bay, Mar Virado Bay and Ubatuba Bay. Concentration of Rn in excess varied from 0,011 to 0,317 Bq/L for Flamengo Bay, from 0,009 to 0,130 Bq/L for Fortaleza Bay, from 0,018 to 0,050 Bq/L for Mar Virado Bay and from 0,004 to 0,120 Bq/L for Ubatuba Bay. The results obtained for the concentration of {sup 222}Rn in excess in a transect at Flamengo Bay varied from 0,002 to 0,036 Bq/L. Higher concentrations of {sup 222}Rn in excess were obtained in Flamengo Bay, Fortaleza Bay and Ubatuba bay. It was also observed that the concentration of {sup 222}Rn in excess increases with depth, as expected. (author)

Vegetation Cover based on Eagleson's Ecohydrological Optimality in Northeast China Transect (NECT)

Science.gov (United States)

Cong, Z.; Mo, K.; Qinshu, L.; Zhang, L.

2016-12-01

Vegetation is considered as the indicator of climate, thus the study of vegetation growth and distribution is of great importance to cognize the ecosystem construction and functions. Vegetation cover is used as an important index to describe vegetation conditions. In Eagleson's ecohydrological optimality, the theoretical optimal vegetation cover M* can be estimated by solving water balance equations. In this study, the theory is applied in the Northeast China Transect (NECT), one of International Geosphere-Biosphere Programs (IGBP) terrestrial transects. The spatial distribution of actual vegetation cover M, which is derived from Normalized Vegetation Index (NDVI) from Moderate-resolution Imaging Spectroradiometer (MODIS), shows that there is a significant gradient ranging from 1 in the east forests to 0 in the west desert. The result indicates that the theoretical M* fits the actual M well (for forest, M* = 0.822 while M = 0.826; for grassland, M* = 0.353 while M = 0.352; the correlation coefficient between M and M* is 0.81). The reasonable calculated proportion of water balance components further demonstrates the applicability of the ecohydrological optimality theory. M* increases with the increase of LAI, leaf angle, stem fraction and temperature, and decreases with the increase of precipitation amount. This method offers the possibility to analyze the impacts of climate change to vegetation cover quantitatively, thus providing advices for eco-restoration projects.

Robust upregulation of serotonin 2A receptors after chronic spinal transection of rats: An immunohistochemical study

DEFF Research Database (Denmark)

Kong, Xiang-Yu; Wienecke, Jacob; Hultborn, Hans

2010-01-01

It is well known that spinal motoneurons below a spinal transection become supersensitive to a systemic administration of serotonin (5-HT) precursors, such as 5-hydroxytryptophan. This supersensitivity has been implicated in both the process of functional recovery following chronic lesions, and a...

Video Transect Images (1999) from the Hawaii Coral Reef Assessment and Monitoring Program (CRAMP) (NODC Accession 0000671)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — This dataset consists of video transect images (JPEG files) from CRAMP surveys taken in 1999 at 26 sites, some of which had multiple depths. Estimates of substrate...

Yeast and bacterial diversity along a transect in an acidic, As-Fe rich environment revealed by cultural approaches.

Science.gov (United States)

Delavat, François; Lett, Marie-Claire; Lièvremont, Didier

2013-10-01

Acid mine drainages (AMDs) are often thought to harbour low biodiversity, yet little is known about the diversity distribution along the drainages. Using culture-dependent approaches, the microbial diversity from the Carnoulès AMD sediment was investigated for the first time along a transect showing progressive environmental stringency decrease. In total, 20 bacterial genera were detected, highlighting a higher bacterial diversity than previously thought. Moreover, this approach led to the discovery of 16 yeast species, demonstrating for the first time the presence of this important phylogenetic group in this AMD. All in all, the location of the microbes along the transect helps to better understand their distribution in a pollution gradient. Copyright © 2013 Elsevier B.V. All rights reserved.

Evaluating the accuracy of sampling to estimate central line-days: simplification of the National Healthcare Safety Network surveillance methods.

Science.gov (United States)

Thompson, Nicola D; Edwards, Jonathan R; Bamberg, Wendy; Beldavs, Zintars G; Dumyati, Ghinwa; Godine, Deborah; Maloney, Meghan; Kainer, Marion; Ray, Susan; Thompson, Deborah; Wilson, Lucy; Magill, Shelley S

2013-03-01

To evaluate the accuracy of weekly sampling of central line-associated bloodstream infection (CLABSI) denominator data to estimate central line-days (CLDs). Obtained CLABSI denominator logs showing daily counts of patient-days and CLD for 6-12 consecutive months from participants and CLABSI numerators and facility and location characteristics from the National Healthcare Safety Network (NHSN). Convenience sample of 119 inpatient locations in 63 acute care facilities within 9 states participating in the Emerging Infections Program. Actual CLD and estimated CLD obtained from sampling denominator data on all single-day and 2-day (day-pair) samples were compared by assessing the distributions of the CLD percentage error. Facility and location characteristics associated with increased precision of estimated CLD were assessed. The impact of using estimated CLD to calculate CLABSI rates was evaluated by measuring the change in CLABSI decile ranking. The distribution of CLD percentage error varied by the day and number of days sampled. On average, day-pair samples provided more accurate estimates than did single-day samples. For several day-pair samples, approximately 90% of locations had CLD percentage error of less than or equal to ±5%. A lower number of CLD per month was most significantly associated with poor precision in estimated CLD. Most locations experienced no change in CLABSI decile ranking, and no location's CLABSI ranking changed by more than 2 deciles. Sampling to obtain estimated CLD is a valid alternative to daily data collection for a large proportion of locations. Development of a sampling guideline for NHSN users is underway.

Phytoplankton community structure in relation to hydrographic features along a coast-to-offshore transect on the SW Atlantic Continental Shelf

Science.gov (United States)

Islabão, C. A.; Mendes, C. R. B.; Detoni, A. M. S.; Odebrecht, C.

2017-12-01

The continental shelf in Southern Brazil is characterized by high biological productivity associated with horizontal and vertical density gradients due to the mixing of distinct water masses. Phytoplankton biomass and composition were evaluated in summer 2013 along an on-offshore transect off the mouth of the Patos Lagoon (Lat. 32°12S). Photosynthetic active radiation, temperature, salinity and fluorescence vertical profiles were carried out and Brünt-Väisäla frequency was estimated. Three water bodies were identified: the Subtropical Shelf Water along the entire transect, the Plata Plume Water on the middle shelf surface and the Tropical Water farther offshore. The water was sampled (N = 40) for the analyses of dissolved inorganic nutrients, phytoplankton cell density and composition. Phytoplankton present in the water was identified and quantified by the classical microscope sedimentation technique, complemented with CHEMTAX analysis of high-performance liquid chromatography (HPLC) pigment data. From the results obtained, chlorophyll a concentration was higher at both coastal stations (1.6-2.0 mg m-3) where the water column was homogeneous and diatoms dominated the stations. This group was replaced by dinoflagellates in stratified conditions on the shelf and farther offshore. Along the onshore-offshore gradient, two types of dinoflagellates were found: the peridinin-containing dinoflagellates Prorocentrum and Scrippsiella with a small contribution at the coastal stations, and the fucoxantin-containing small Gymnodiniales cells (< 15 μm) with more than 50% of the total chlorophyll a at the stations on the continental shelf, especially associated with the chlorophyll maximum at the base of the euphotic zone. The positive (negative) relationship between the biomass of dinoflagellates (diatoms) with the Brünt-Väisäla frequency, respectively, support the hypothesis that stratification is the most important environmental factor that determines the biomass of

Transection of the pituitary stalk: evaluation of two cases by computerized tomography and magnetic resonance

International Nuclear Information System (INIS)

Amaral, L.L.F. do; Mendonca, R.A.; Natal, M.R.C.

1992-01-01

The authors present two cases of pituitary dwarfism where the study by high resolution computed tomography and by magnetic resonance imaging show transection of the pituitary stalk as the cause of the endocrine disturb. The importance of these methods on the investigation of disturbs of the hypothalamus-hypophyseal axis is stressed. (author)

Noninvasive Sampling of Mucosal Lining Fluid for the Quantification of In Vivo Upper Airway Immune-mediator Levels

DEFF Research Database (Denmark)

Wolsk, Helene Mygind; Chawes, Bo L.; Thorsen, Jonathan

2017-01-01

(often used by other techniques). The mucosal lining fluid is sampled on a strip of filter paper placed at the anterior part of the inferior turbinate and left for 2 min of absorption. Analytes are eluted from the filter papers, and the extracted protein-based eluates are analyzed...

Natural Surfactant Enrichments in the Atlantic Ocean Between 50°N and 50°S: Data from the Atlantic Meridional Transect, Oct-Nov 2014

Science.gov (United States)

Sabbaghzadeh, B.; Upstill-Goddard, R. C.; Nightingale, P. D.; Beale, R.

2016-02-01

Surfactants that decrease air-sea gas exchange by suppressing the gas transfer velocity (kw) show variable enrichments in the sea surface microlayer (SML) relative to the underlying water. This reflects variability in the rates of surfactant production and consumption. Total surfactant activity (SA: equivalent to Triton-X-100, mgL -1) was determined daily between the UK and the Falkland Islands, during cruise 24 of the Atlantic Meridional Transect programme (AMT 24). Samples were simultaneously obtained from the SML (Garrett screen), from the ship's underway system (inlet at 7m) and in hydrocasts to 500m. SA analysis was by hanging mercury drop electrode polarography (Metrohm 797 VA Computrace). SA enrichment factors (EF: SML SA / underlying water SA) >1 were observed at most locations, showing the SML to be consistently SA-enriched along the entire cruise transect. The persistence of these enrichments up to wind speeds 12m s-¹ support previous conclusions regarding the stability of the SML under high winds. More specifically, SA in the SML was up to four-fold higher in the Atlantic Northern Hemisphere than in the Atlantic Southern Hemisphere. Even so, EF values were not significantly different between the two hemispheres (p >0.05). These various findings have potentially important implications for kw variability across ocean basin scales.

A free vein graft cap influences neuroma formation after nerve transection.

Science.gov (United States)

Galeano, Mariarosaria; Manasseri, Benedetto; Risitano, Giovanni; Geuna, Stefano; Di Scipio, Federica; La Rosa, Paola; Delia, Gabriele; D'Alcontres, Francesco Stagno; Colonna, Michele R

2009-01-01

: Neuroma formation is a major problem in nerve surgery and consensus about its prevention has not been reached. It has been suggested that vein covering can reduce neuroma formation in transected nerves. In this article, the Authors propose an easy and novel method of covering by nerve stump capping with a free vein graft. : Neuroma-like lesions were created on the rat thigh sectioning the femoral nerve above its division in 16 animals. The proximal nerve stump was invaginated into the lumen of a 1.5 cm long femoral free vein graft on the right side, and the vein was closed on itself by microsurgical sutures to form a cap for the nerve stump. On the left side acting as the control neuroma, the nerve was cut and left uncovered. Histological and immunohistochemical assessment was used to quantify the degree of neuroma formation. : Significant differences were found in both neuroma size and axon-glia organization between the treated and control sides indicating that free vein graft capping reduced neuroma formation in comparison to uncovered nerve stumps. : Our results confirm that vein-covering of a transected nerve stump can be effective in reducing neuroma formation. Moreover, unlike previous works that buried the nerve into an adjacent vein left in place, our experiments showed that also the use of a free vein graft cap can hinder neuroma formation. Although translation of rat experiments to the clinics should be dealt with caution, our data suggest a careful clinical use of the technique. (c) 2009 Wiley-Liss, Inc. Microsurgery, 2009.

Regeneration of supraspinal axons after transection of the thoracic spinal cord in the developing opossum, Didelphis virginiana.

Science.gov (United States)

Wang, X M; Terman, J R; Martin, G F

1998-08-17

When the thoracic spinal cord of the North American opossum is transected early in development, supraspinal axons grow through the lesion. In the experiments reported here, we asked whether regeneration of cut axons contributes to such growth. Fast Blue (FB) was injected into the lumbar cord on postnatal day (PD)5, 8, 15, or 20. Five days later, FB was removed by gentle suction, and the spinal cord was transected at thoracic levels. Fourteen days later, rhodamine B dextran was injected between the site of the FB injection and the lesion. The pups were maintained for an additional 7-10 days before killing and perfusion. We assumed that supraspinal neurons that contained FB survived axotomy and those that contained both FB and rhodamine B dextran supported regenerating axons. In the PD5 group (lesioned at PD10), regenerative growth was documented for axons originating in all of the supraspinal nuclei that innervate the lumbar cord by PD10. When the injections were made at the later ages, however, neurons that supported regenerative growth were fewer in number and regionally restricted. In some cases, they were limited primarily to the red nucleus, the medullary raphe, and the adjacent reticular formation. Our results show that regeneration of cut axons contributes to growth of supraspinal axons through the lesion after transection of the thoracic cord in developing opossums and that the critical period for regenerative growth is not the same for all axons.

Histological Changes in the Proximal and Distal Tendon Stumps Following Transection of Achilles Tendon in the Rabbits

International Nuclear Information System (INIS)

Al-Qattan, M. M.; Hawary, K.; Mawlana, O. H.; Ahmed, R. A. M.

2016-01-01

Objective: To determine tendon stump changes following unrepaired Achilles tendon lacerations in an animal model. Study Design: An experimental study. Place and Duration of Study: King Saud University, Riyadh, Saudi Arabia, from October 2013 to January 2014. Methodology: Arabbit model was developed and studied tendon retraction and histological changes in the proximal and distal stumps following transection of the Achilles tendon. Result: Over a period of 12 weeks, retraction of the distal tendon stump was minimal (2 - 3 mm). In contrast, retraction of the proximal tendon stump peaked to reach 6 mm at 4 weeks post-injury and plateaued to reach 7 - 8 mm at the 12-week interval. Conclusion: Following complete transection of the Achilles tendon, tendon retraction correlated with the density of myofibroblast expression within the tendon stump. Further research is needed to investigate the pathophysiology of these findings. (author)

Measurement of amino acid levels in the vitreous humor of rats after chronic intraocular pressure elevation or optic nerve transection.

Science.gov (United States)

Levkovitch-Verbin, Hana; Martin, Keith R G; Quigley, Harry A; Baumrind, Lisa A; Pease, Mary Ellen; Valenta, Danielle

2002-10-01

To investigate whether the levels of free amino acids and protein in the vitreous of rat eyes are altered with chronic intraocular pressure (IOP) elevation or after optic nerve transection. The concentrations of 20 amino acids in the vitreous humor were measured by high-performance liquid chromatography in both eyes of 41 rats with unilateral IOP elevation induced by translimbal photocoagulation. Eyes were studied 1 day and 1, 2, 4, and 9 weeks after initial IOP elevation. The same amino acids were measured in 41 rats 1 day and 2, 4, and 9 weeks after unilateral transection of the orbital optic nerve. The intravitreal protein level was assayed in additional 22 rats with IOP elevation and 12 rats after nerve transection. Two masked observers evaluated the amount of optic nerve damage with a semiquantitative, light-microscopic technique. In rats with experimental glaucoma, amino acid concentrations were unchanged 1 day after treatment. At 1 week, 4 of 20 amino acids (aspartate, proline, alanine, and lysine) were higher than in control eyes ( 0.05). Vitreous protein level was significantly higher in glaucomatous eyes than their paired controls at 1 day ( 0.01).

Analysis of plant hormones by microemulsion electrokinetic capillary chromatography coupled with on-line large volume sample stacking.

Science.gov (United States)

Chen, Zongbao; Lin, Zian; Zhang, Lin; Cai, Yan; Zhang, Lan

2012-04-07

A novel method of microemulsion electrokinetic capillary chromatography (MEEKC) coupled with on-line large volume sample stacking was developed for the analysis of six plant hormones including indole-3-acetic acid, indole-3-butyric acid, indole-3-propionic acid, 1-naphthaleneacetic acid, abscisic acid and salicylic acid. Baseline separation of six plant hormones was achieved within 10 min by using the microemulsion background electrolyte containing a 97.2% (w/w) 10 mM borate buffer at pH 9.2, 1.0% (w/w) ethyl acetate as oil droplets, 0.6% (w/w) sodium dodecyl sulphate as surfactant and 1.2% (w/w) 1-butanol as cosurfactant. In addition, an on-line concentration method based on a large volume sample stacking technique and multiple wavelength detection was adopted for improving the detection sensitivity in order to determine trace level hormones in a real sample. The optimal method provided about 50-100 fold increase in detection sensitivity compared with a single MEEKC method, and the detection limits (S/N = 3) were between 0.005 and 0.02 μg mL(-1). The proposed method was simple, rapid and sensitive and could be applied to the determination of six plant hormones in spiked water samples, tobacco leaves and 1-naphthylacetic acid in leaf fertilizer. The recoveries ranged from 76.0% to 119.1%, and good reproducibilities were obtained with relative standard deviations (RSDs) less than 6.6%.

Spatial variability of detrended soil plow layer penetrometer resistance transect in a sugarcane field

Science.gov (United States)

Pérez, Luis D.; Cumbrera, Ramiro; Mato, Juan; Millán, Humberto; Tarquis, Ana M.

2015-04-01

Spatial variability of soil properties is relevant for identifying those zones with physical degradation. In this sense, one has to face the problem of identifying the origin and distribution of spatial variability patterns (Brouder et al., 2001; Millán et al., 2012). The objective of the present work was to quantify the spatial structure of soil penetrometer resistance (PR) collected from a transect data consisted of 221 points equidistant. In each sampling, readings were obtained from 0 cm till 70 cm of depth, with an interval of 5 cm (Pérez, 2012). The study was conducted on a Vertisol (Typic Hapludert) dedicated to sugarcane (Saccharum officinarum L.) production during the last sixty years (Pérez et al., 2010). Recently, scaling approach has been applied on the determination of the scaling data properties (Tarquis et al., 2008; Millán et al., 2012; Pérez, 2012). We focus in the Hurst analysis to characterize the data variability for each depth. Previously a detrended analysis was conducted in order to better study de intrinsic variability of the series. The Hurst exponent (H) for each depth was estimated showing a characteristic pattern and differentiating PR evolution in depth. References Brouder, S., Hofmann, B., Reetz, H.F., 2001. Evaluating spatial variability of soil parameters for input management. Better Crops 85, 8-11. Millán, H; AM Tarquís, Luís D. Pérez, Juan Mato, Mario González-Posada, 2012. Spatial variability patterns of some Vertisol properties at a field scale using standardized data. Soil and Tillage Research, 120, 76-84. Pérez, Luís D. 2012. Influencia de la maquinaria agrícola sobre la variabilidad espacial de la compactación del suelo. Aplicación de la metodología geoestadística-fractal. PhD thesis, UPM (In Spanish). Pérez, Luís D., Humberto Millán, Mario González-Posada 2010. Spatial complexity of soil plow layer penetrometer resistance as influenced by sugarcane harvesting: A prefractal approach. Soil and Tillage

Behaviour of nickel, copper, zinc and cadmium in the upper 300 m of a transect in the Southern Ocean (57°-62°S, 49°W)

NARCIS (Netherlands)

Nolting, R.F.; Baar, H.J.W. de

1994-01-01

The distributions of Ni, Cu, Zn and Cd in relation to phosphate, nitrate and silicate in the upper 300 m of a transect in the Southern Ocean were studied. This transect covers the Scotia Sea, the Confluence and the Weddell Sea. These three watermasses are clearly separated by their temperature and

Contribution of the climatic transect approach application to the study of soil degradation in South of Spain.

Science.gov (United States)

Ruiz-Sinoga, José D.; Gabarrón-Galeote, Miguel A.; Cerdà, Artemi; Martínez-Murillo, Juan F.

2014-05-01

Since 1990s, the climatic transect approach has been widely applied to Mediterranean mountainous areas where climatic conditions are modified in few kilometres, from semiarid to humid conditions. The target in most of the cases was to evaluate the climatic change effect on the spatial variability of eco-geomorphological system, runoff and erosion and soil degradation processes, especially, in abandoned fields and Mediterranean rangeland. The Physical Geography and Land Management Research Group from the University of Málaga is applying this experimental approach since 2001. The study area corresponded to the Mediterranean Cordillera Bética in South of Spain, from the Strait of Gibraltar to Cabo de Gata, where a longitudinal climatic transect can be observed: from humid Mediterranean climate in the West (>1,500 mm/y) to nearly arid Mediterranean climate in the East (200 mm/y). More specifically, the investigations were focussed on the spatial and temporal variability of eco-geomorphological system (vegetation, soil and water relationship), runoff and erosion processes and controlling factors affecting to abandoned fields located in steep hillslopes of metamorphic and acid bedrocks (phyllites, schists and mica-schists) but differing in climatic conditions (humid, subhumid, dry and semiarid Mediterranean climate). The aim of this contribution is to share our findings and challenges from the last 13 years being some of the most important ones: i) Mediterranean summer drought homogenise the functioning of eco-geomorphological system independently of the geographical location along the climatic transect; ii) drought period affects more dramatically to humid and subhumid Mediterranean areas, especially, to the vegetation cover and pattern; iii) areas characterised by dry-Mediterranean climate are found as threshold areas and in risk of aridification due to Climate Change; iv) runoff and erosion processes can be similar in humid and semiarid abandoned lands as it has to

Surfactant control of air-sea gas exchange from North Sea coastal waters and the Atlantic Meridional Transect

Science.gov (United States)

Pereira, R.

2016-02-01

Suppression of gas transfer velocity (kw) by surfactants are well established, both in laboratory wind flumes and purposeful oceanic releases. However, the effects on kw of time and space varying concentrations of natural surfactant are inadequately studied. We have developed an automated gas exchange tank for simultaneous high precision measurement of kw in unmodified seawater samples. Here we present data from two studies along a coastal North Sea transect during 2012-2013 and the Atlantic Meridional Transect (AMT) 24 from September to November 2014. Measurements of surfactant activity (SA), CDOM absorbance and chlorophyll-a have enabled us to characterize the effects of variable amounts of natural surfactant on kw. North Sea coastal waters range in k660 (kw normalized to the value for CO2 in freshwater at 20oC) was 6.8-24.5 cm hr-1 (n=20), with the ranges of SA, total CDOM absorbance (200-450 nm) and chlorophyll-a measured in the surface microlayer (SML) of our seawater samples were 0.08-0.38 mg l-1 T-X-100, 0.13-4.7 and 0.09-1.54 µg l-1, respectively. The AMT k660 ranged from 7.0-23.9 cm hr-1 (n=22), with SA measured in the SML and subsurface water (SSW) of our seawater samples ranging from 0.15-1.08 mg l-1 T-X-100 and 0.07-0.43 mg l-1 T-X-100, respectively. Importantly, we found 12-45% (North Sea) and 1-43% (AMT) k660 suppression relative to Milli-Q water that relate to seasonal and spatial differences in SA. The North Sea demonstrated notable seasonal influences on k660 suppression that were related to CDOM absorbance and chlorophyll-a. The degree of k660 suppression was highest in summer consistent with k660 control by natural surfactant. The degree of k660 suppression decreased with distance offshore in the North Sea and displayed a strong relationship with SA (r2 = 0.51-0.64, p = 0.02, n = 20). The AMT demonstrated notable differences in k660 suppression between hemispheres and across the Longhurst Provinces but the overall relationship between k660

Multiple Lines of Evidence

Energy Technology Data Exchange (ETDEWEB)

Amidan, Brett G. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Venzin, Alexander M. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Bramer, Lisa M. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States)

2015-06-03

This paper discusses the process of identifying factors that influence the contamination level of a given decision area and then determining the likelihood that the area remains unacceptable. This process is referred to as lines of evidence. These lines of evidence then serve as inputs for the stratified compliance sampling (SCS) method, which requires a decision area to be divided into strata based upon contamination expectations. This is done in order to focus sampling efforts more within stratum where contamination is more likely and to use the domain knowledge about these likelihoods of the stratum remaining unacceptable to buy down the number of samples necessary, if possible. Two different building scenarios were considered as an example (see Table 3.1). SME expertise was elicited concerning four lines of evidence factors (see Table 3.2): 1) amount of contamination that was seen before decontamination, 2) post-decontamination air sampling information, 3) the applied decontaminant information, and 4) the surface material. Statistical experimental design and logistic regression modelling were used to help determine the likelihood that example stratum remained unacceptable for a given example scenario. The number of samples necessary for clearance was calculated by applying the SCS method to the example scenario, using the estimated likelihood of each stratum remaining unacceptable as was determined using the lines of evidence approach. The commonly used simple random sampling (SRS) method was also used to calculate the number of samples necessary for clearance for comparison purposes. The lines of evidence with SCS approach resulted in a 19% to 43% reduction in total number of samples necessary for clearance (see Table 3.6). The reduction depended upon the building scenario, as well as the level of percent clean criteria. A sensitivity analysis was also performed showing how changing the estimated likelihoods of stratum remaining unacceptable affect the number

The fate of eroded soil organic carbon along a European transect – controls after deposition in terrestrial and aquatic systems

DEFF Research Database (Denmark)

Kirkels, Frédérique; Cammeraat, Erik; Kalbitz, Karsten

that the turnover of deposited C is significantly affected by soil and organic matter properties, and whether deposition occurs in terrestrial or aquatic environments. We sampled topsoils from 10 agricultural sites along a European transect, spanning a wide range of SOC and soil characteristics (e.g. texture......The potential fate of eroded soil organic carbon (SOC) after deposition is key to understand carbon cycling in eroding landscapes. Globally, large quantities of sediments and SOC are redistributed by soil erosion on agricul-tural land, particularly after heavy precipitation events. Deposition......, aggregation, C content, etc.). Turnover of SOC was determined for terrestrial and aquatic depositional conditions in a 10-week incubation study. Moreover, we studied the impact of labile carbon inputs (‘priming’) on SOC stability using 13C labelled cellulose. We evaluated potentially important controls...

Quantifying the Spatiotemporal Patterns of Urbanization along Urban-Rural Gradient with a Roadscape Transect Approach: A Case Study in Shanghai, China

Directory of Open Access Journals (Sweden)

Zhonghao Zhang

2016-08-01

Full Text Available Quantifying the landscape pattern change can effectively demonstrate the ecological progresses and the consequences of urbanization. Based on remotely sensed land cover data in 1994, 2000, 2006 and a gradient analysis with landscape metrics at landscape- and class- level, we attempted to characterize the individual and entire landscape patterns of Shanghai metropolitan during the rapid urbanization. We highlighted that a roadscape transect approach that combined the buffer zone method and the transect-based approach was introduced to describe the urban-rural patterns of agricultural, residential, green, industrial, and public facilities land along the railway route. Our results of landscape metrics showed significant spatiotemporal patterns and gradient variations along the transect. The urban growth pattern in two time spans conform to the hypothesis for diffusion–coalescence processes, implying that the railway is adaptive as a gradient element to analyze the landscape patterns with urbanization. As the natural landscape was replaced by urban landscape gradually, the desakota region expanded its extent widely. Suburb areas witnessed the continual transformation from the predominantly rural landscape to peri-urban landscape. Furthermore, the gap between urban and rural areas remained large especially in public service. More reasonable urban plans and land use policies should push to make more efforts to transition from the urban-rural separation to coordinated urban-rural development. This study is a meaningful trial in demonstrating a new form of urban–rural transects to study the landscape change of large cities. By combining gradient analysis with landscape metrics, we addressed the process of urbanization both spatially and temporally, and provided a more quantitative approach to urban studies.

Mineralogy of soils from two continental-scale transects across the United States and Canada and its relation to soil geochemistry and climate

Science.gov (United States)

Eberl, D.D.; Smith, D.B.

2009-01-01

Quantitative mineralogy correlates with major-, minor- and trace-element chemistry for 387 samples of A-horizon and deeper soils collected from east-west and north-south transects across the USA and Canada, where the deeper soils were collected beneath the A-horizon samples. Concentrations of the major elements correlate with specific mineral phases. Minor- and trace-element concentrations correlate with the same phases as the major elements with which they share similar geochemical behavior. Concentrations of quartz and feldspar correlate with precipitation trends east of the Rocky Mountains, and are independent of the underlying rock type and age, indicating that the weathering of soils in this region may have reached a steady-state mineralogy. Other trends in mineralogy relate to physiographic province. The combination of quantitative mineralogy and chemical analysis yields a much richer portrait of soils than can be gained from chemistry alone, because the origins of chemical trends and the chemical availability of specific elements are related to mineralogy.

Samples and Sampling Protocols for Scientific Investigations | Joel ...

African Journals Online (AJOL)

... from sampling, through sample preparation, calibration to final measurement and reporting. This paper, therefore offers useful information on practical guidance on sampling protocols in line with best practice and international standards. Keywords: Sampling, sampling protocols, chain of custody, analysis, documentation ...

A large sample of Kohonen-selected SDSS quasars with weak emission lines: selection effects and statistical properties

Science.gov (United States)

Meusinger, H.; Balafkan, N.

2014-08-01

Aims: A tiny fraction of the quasar population shows remarkably weak emission lines. Several hypotheses have been developed, but the weak line quasar (WLQ) phenomenon still remains puzzling. The aim of this study was to create a sizeable sample of WLQs and WLQ-like objects and to evaluate various properties of this sample. Methods: We performed a search for WLQs in the spectroscopic data from the Sloan Digital Sky Survey Data Release 7 based on Kohonen self-organising maps for nearly 105 quasar spectra. The final sample consists of 365 quasars in the redshift range z = 0.6 - 4.2 (z¯ = 1.50 ± 0.45) and includes in particular a subsample of 46 WLQs with equivalent widths WMg iiattention was paid to selection effects. Results: The WLQs have, on average, significantly higher luminosities, Eddington ratios, and accretion rates. About half of the excess comes from a selection bias, but an intrinsic excess remains probably caused primarily by higher accretion rates. The spectral energy distribution shows a bluer continuum at rest-frame wavelengths ≳1500 Å. The variability in the optical and UV is relatively low, even taking the variability-luminosity anti-correlation into account. The percentage of radio detected quasars and of core-dominant radio sources is significantly higher than for the control sample, whereas the mean radio-loudness is lower. Conclusions: The properties of our WLQ sample can be consistently understood assuming that it consists of a mix of quasars at the beginning of a stage of increased accretion activity and of beamed radio-quiet quasars. The higher luminosities and Eddington ratios in combination with a bluer spectral energy distribution can be explained by hotter continua, i.e. higher accretion rates. If quasar activity consists of subphases with different accretion rates, a change towards a higher rate is probably accompanied by an only slow development of the broad line region. The composite WLQ spectrum can be reasonably matched by the

Pattern of invasion by Adhatoda vasica in savannas of Sariska Tiger Reserve, Rajasthan, Western India

NARCIS (Netherlands)

Bhatt, Priyanka; Rawat, G.S.; Sankar, K.; Tomlinson, K.W.; Langevelde, van F.

2015-01-01

As part of global experiments on Savanna vegetation, we examined the ecological characteristics of an important
semiarid savanna in the Indian sub-continent i.e Sariska Tiger Reserve, Rajasthan, Western India during April 2009 to
May 2011. 149 plots across five line transects were sampled

Positive effects of bFGF modified rat amniotic epithelial cells transplantation on transected rat optic nerve.

Directory of Open Access Journals (Sweden)

Jia-Xin Xie

Full Text Available Effective therapy for visual loss caused by optic nerve injury or diseases has not been achieved even though the optic nerve has the regeneration potential after injury. This study was designed to modify amniotic epithelial cells (AECs with basic fibroblast growth factor (bFGF gene, preliminarily investigating its effect on transected optic nerve.A human bFGF gene segment was delivered into rat AECs (AECs/hbFGF by lentiviral vector, and the gene expression was examined by RT-PCR and ELISA. The AECs/hbFGF and untransfected rat AECs were transplanted into the transected site of the rat optic nerve. At 28 days post transplantation, the survival and migration of the transplanted cells was observed by tracking labeled cells; meanwhile retinal ganglion cells (RGCs were observed and counted by employing biotin dextran amine (BDA and Nissl staining. Furthermore, the expression of growth associated protein 43 (GAP-43 within the injury site was examined with immunohistochemical staining.The AECs/hbFGF was proven to express bFGF gene and secrete bFGF peptide. Both AECs/hbFGF and AECs could survive and migrate after transplantation. RGCs counting implicated that RGCs numbers of the cell transplantation groups were significantly higher than that of the control group, and the AECs/hbFGF group was significantly higher than that of the AECs group. Moreover GAP-43 integral optical density value in the control group was significantly lower than that of the cell transplantation groups, and the value in the AECs/hbFGF group was significantly higher than that of the AECs group.AECs modified with bFGF could reduce RGCs loss and promote expression of GAP-43 in the rat optic nerve transected model, facilitating the process of neural restoration following injury.

Hawaii Coral Reef Assessment and Monitoring Program (CRAMP): Benthic Data from Rapid Assessment Transects 2001-2004 (NODC Accession 0002464)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — This dataset consists of CRAMP Rapid Assessment Transect surveys taken in 2001-2004 and includes quantitative estimates of substrate type and species. The types and...

Hawaii Coral Reef Assessment and Monitoring Program (CRAMP): Benthic Data from Rapid Assessment Transects Maui 2006 (NODC Accession 0039383)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — This dataset consists of CRAMP Rapid Assessment Transect surveys taken in 2006 and includes quantitative estimates of substrate type and species. In 2006, there were...

Monitoring of an esterification reaction by on-line direct liquid sampling mass spectrometry and in-line mid infrared spectrometry with an attenuated total reflectance probe

International Nuclear Information System (INIS)

Owen, Andrew W.; McAulay, Edith A.J.; Nordon, Alison; Littlejohn, David; Lynch, Thomas P.; Lancaster, J. Steven; Wright, Robert G.

2014-01-01

Highlights: • High efficiency thermal vaporiser designed and used for on-line reaction monitoring. • Concentration profiles of all reactants and products obtained from mass spectra. • By-product formed from the presence of an impurity detected by MS but not MIR. • Mass spectrometry can detect trace and bulk components unlike molecular spectrometry. - Abstract: A specially designed thermal vaporiser was used with a process mass spectrometer designed for gas analysis to monitor the esterification of butan-1-ol and acetic anhydride. The reaction was conducted at two scales: in a 150 mL flask and a 1 L jacketed batch reactor, with liquid delivery flow rates to the vaporiser of 0.1 and 1.0 mL min −1 , respectively. Mass spectrometry measurements were made at selected ion masses, and classical least squares multivariate linear regression was used to produce concentration profiles for the reactants, products and catalyst. The extent of reaction was obtained from the butyl acetate profile and found to be 83% and 76% at 40 °C and 20 °C, respectively, at the 1 L scale. Reactions in the 1 L reactor were also monitored by in-line mid-infrared (MIR) spectrometry; off-line gas chromatography (GC) was used as a reference technique when building partial least squares (PLS) multivariate calibration models for prediction of butyl acetate concentrations from the MIR spectra. In validation experiments, good agreement was achieved between the concentration of butyl acetate obtained from in-line MIR spectra and off-line GC. In the initial few minutes of the reaction the profiles for butyl acetate derived from on-line direct liquid sampling mass spectrometry (DLSMS) differed from those of in-line MIR spectrometry owing to the 2 min transfer time between the reactor and mass spectrometer. As the reaction proceeded, however, the difference between the concentration profiles became less noticeable. DLSMS had advantages over in-line MIR spectrometry as it was easier to generate

Coral reef digital still images and benthic species of the Hawaii Coral Reef Assessment and Monitoring Program (CRAMP) on Maui in 2014 (NCEI Accession 0147682)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — This data set consists of digitial still images along coral reef transect lines, and photoquads on some transect lines, as well as quantitative benthic data for...

Place Mapping – transect walks in Arctic urban landscapes

Directory of Open Access Journals (Sweden)

Peter Hemmersam

2016-11-01

Full Text Available This article investigates how experimental forms of urban mapping can reveal the particularity of places in non-standard urban situations with the intention of moving beyond the reductivism of still-dominant modernist modes of mapping and associated forms of planning. In order to do so, it reports on the emergence of a methodology involving transect walks, with the purpose of mapping the peculiarities of cultural landscapes. The study is located in cities and communities in the Arctic that are undergoing rapid transformation and are in urgent need of new conceptual approaches capable of enabling future thinking and strategic action. The article specifically asks how such a methodology works to includes the ephemeral and emergent, but also digital, dimensions of urban landscapes, and results in a complex reflexive method of critically reading and writing, of moving and locating, of seeing and picturing place mapping.

Authentication of M14 melanoma cell line proves misidentification of MDA‐MB‐435 breast cancer cell line

Science.gov (United States)

Korch, Christopher; Hall, Erin M.; Dirks, Wilhelm G.; Ewing, Margaret; Faries, Mark; Varella‐Garcia, Marileila; Robinson, Steven; Storts, Douglas; Turner, Jacqueline A.; Wang, Ying; Burnett, Edward C.; Healy, Lyn; Kniss, Douglas; Neve, Richard M.; Nims, Raymond W.; Reid, Yvonne A.; Robinson, William A.

2017-01-01

A variety of analytical approaches have indicated that melanoma cell line UCLA‐SO‐M14 (M14) and breast carcinoma cell line MDA‐MB‐435 originate from a common donor. This indicates that at some point in the past, one of these cell lines became misidentified, meaning that it ceased to correspond to the reported donor and instead became falsely identified (through cross‐contamination or other means) as a cell line from a different donor. Initial studies concluded that MDA‐MB‐435 was the misidentified cell line and M14 was the authentic cell line, although contradictory evidence has been published, resulting in further confusion. To address this question, we obtained early samples of the melanoma cell line (M14), a lymphoblastoid cell line from the same donor (ML14), and donor serum preserved at the originator's institution. M14 samples were cryopreserved in December 1975, before MDA‐MB‐435 cells were established in culture. Through a series of molecular characterizations, including short tandem repeat (STR) profiling and cytogenetic analysis, we demonstrated that later samples of M14 and MDA‐MB‐435 correspond to samples of M14 frozen in 1975, to the lymphoblastoid cell line ML14, and to the melanoma donor's STR profile, sex and blood type. This work demonstrates conclusively that M14 is the authentic cell line and MDA‐MB‐435 is misidentified. With clear provenance information and authentication testing of early samples, it is possible to resolve debates regarding the origins of problematic cell lines that are widely used in cancer research. PMID:28940260

Nerve transection repair using laser-activated chitosan in a rat model.

Science.gov (United States)

Bhatt, Neel K; Khan, Taleef R; Mejias, Christopher; Paniello, Randal C

2017-08-01

Cranial nerve transection during head and neck surgery is conventionally repaired with microsuture. Previous studies have demonstrated recovery with laser nerve welding (LNW), a novel alternative to microsuture. LNW has been reported to have poorer tensile strength, however. Laser-activated chitosan, an adhesive biopolymer, may promote nerve recovery while enhancing the tensile strength of the repair. Using a rat posterior tibial nerve injury model, we compared four different methods of nerve repair in this pilot study. Animal study. Animals underwent unilateral posterior tibial nerve transection. The injury was repaired by potassium titanyl phosphate (KTP) laser alone (n = 20), KTP + chitosan (n = 12), microsuture + chitosan (n = 12), and chitosan alone (n = 14). Weekly walking tracks were conducted to measure functional recovery (FR). Tensile strength (TS) was measured at 6 weeks. At 6 weeks, KTP laser alone had the best recovery (FR = 93.4% ± 8.3%). Microsuture + chitosan, KTP + chitosan, and chitosan alone all showed good FR (87.4% ± 13.5%, 84.6% ± 13.0%, and 84.1% ± 10.0%, respectively). One-way analysis of variance was performed (F(3,56) = 2.6, P = .061). A TS threshold of 3.8 N was selected as a control mean recovery. Three groups-KTP alone, KTP + chitosan, and microsuture + chitosan-were found to meet threshold 60% (95% confidence interval [CI]: 23.1%-88.3%), 75% (95% CI: 46.8%-91.1%), and 100% (95% CI: 75.8%-100.0%), respectively. In the posterior tibial nerve model, all repair methods promoted nerve recovery. Laser-activated chitosan as a biopolymer anchor provided good TS and appears to be a novel alternative to microsuture. This repair method may have surgical utility following cranial nerve injury during head and neck surgery. NA Laryngoscope, 127:E253-E257, 2017. © 2017 The American Laryngological, Rhinological and Otological Society, Inc.

Bionomics of Anopheline species and malaria transmission dynamics along an altitudinal transect in Western Cameroon

Directory of Open Access Journals (Sweden)

Toto Jean-Claude

2010-05-01

Full Text Available Abstract Background Highland areas of Africa are mostly malaria hypoendemic, due to climate which is not appropriate for anophelines development and their reproductive fitness. In view of designing a malaria control strategy in Western Cameroon highlands, baseline data on anopheline species bionomics were collected. Methods Longitudinal entomological surveys were conducted in three localities at different altitudinal levels. Mosquitoes were captured when landing on human volunteers and by pyrethrum spray catches. Sampled Anopheles were tested for the presence of Plasmodium circumsporozoite proteins and their blood meal origin with ELISA. Entomological parameters of malaria epidemiology were assessed using Mac Donald's formula. Results Anopheline species diversity and density decreased globally from lowland to highland. The most aggressive species along the altitudinal transect was Anopheles gambiae s.s. of S molecular form, followed in the lowland and on the plateau by An. funestus, but uphill by An. hancocki. An. gambiae and An. ziemanni exhibited similar seasonal biting patterns at the different levels, whereas different features were observed for An. funestus. Only indoor resting species could be captured uphill; it is therefore likely that endophilic behaviour is necessary for anophelines to climb above a certain threshold. Of the ten species collected along the transect, only An. gambiae and An. funestus were responsible for malaria transmission, with entomological inoculation rates (EIR of 90.5, 62.8 and zero infective bites/human/year in the lowland, on the plateau and uphill respectively. The duration of gonotrophic cycle was consistently one day shorter for An. gambiae as compared to An. funestus at equal altitude. Altitudinal climate variations had no effect on the survivorship and the subsequent life expectancy of the adult stage of these malaria vectors, but most probably on aquatic stages. On the contrary increasing altitude

Determination of drugs in biological fluids by high-performance liquid chromatography with on-line sample processing.

Science.gov (United States)

Oertel, R; Richter, K; Gramatté, T; Kirch, W

1998-02-27

An automated two column HPLC system with the new packing material LiChrospher RP-18 ADS (alkyl-diol-silica) was tested for the determination of several drugs and metabolites (talinolol, celiprolol, metoprolol, oxprenolol, triamterene, trimethoprim, tiracizine, articaine, detajmium, ajmaline, lamotrigine) in various biological fluids (serum, urine, intestinal aspirates, supernatants of cell cultures and supernatants after protein denaturation). The method allows the direct injection of biological fluids into a reversed-phase HPLC system and on-line clean-up and sample enrichment by a column-switching technique. Precision, accuracy and sensitivity were similar to conventional assays as described in the literature. With this new method it was possible to measure drug concentrations in various biological fluids without changing the sample preparation procedure. In some cases an additional sample preparation like protein denaturation or solid-phase extraction was advantageous to enhance the sensitivity of the method and the life-time of the ADS column.

Video Transect Images from the Hawaii Coral Reef Assessment and Monitoring Program (CRAMP): Data from 2002 (NODC Accession 0000961)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — This dataset consists of video transect images (TIF files) from CRAMP surveys taken in 2002 at 23 sites, some of which had multiple depths. Estimates of substrate...

Video Transect Images from the Hawaii Coral Reef Assessment and Monitoring Program (CRAMP):Data from 2003 (NODC Accession 0001732)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — This dataset consists of video transect images (TIF files) from CRAMP surveys taken in 2003 at 15 sites, some of which had multiple depths. Estimates of substrate...

Video Transect Images from the Hawaii Coral Reef Assessment and Monitoring Program (CRAMP): Data from 2003 (NODC Accession 0001732)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — This dataset consists of video transect images (TIF files) from CRAMP surveys taken in 2003 at 15 sites, some of which had multiple depths. Estimates of substrate...

Video transect images from the Hawaii Coral Reef Assessment and Monitoring Program (CRAMP): data from 2002 (NODC Accession 0000961)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — This dataset consists of video transect images (TIF files) from CRAMP surveys taken in 2002 at 23 sites, some of which had multiple depths. Estimates of substrate...

Video Transect Images from the Hawaii Coral Reef Assessment and Monitoring Program (CRAMP): Data from 2000 (NODC Accession 0000728)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — This dataset consists of video transect images (TIF files) from CRAMP surveys taken in 2000 at 23 sites, some of which had multiple depths. Estimates of substrate...

The effect of sea-ice loss on beluga whales (Delphinapterus leucas) in West Greenland

DEFF Research Database (Denmark)

Heide-Jørgensen, M.P.; Laidre, K.L.; Simon, Malene Juul

2009-01-01

An aerial survey was conducted to estimate the abundance of belugas (Delphinapterus leucas) on their wintering ground in West Greenland in March-April 2006 and 2008. The survey was conducted as a double platform aerial line transect survey, and sampled approximately 17% of the total survey area o...

Digital Still Transect Images from the Hawaii Coral Reef Assessment and Monitoring Program (CRAMP) Maui 2006 (NODC Accession 0039627)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — This dataset consists of digital still transect images (JPG files) from CRAMP surveys taken on Maui in 2006 at 8 sites, some of which had multiple depths. Surveys...

Cable line engineering

International Nuclear Information System (INIS)

Jang, Hak Sin; Kim, Sin Yeong

1998-02-01

This book is about cable line engineering. It is comprised of nine chapters, which deals with summary of cable communication such as way, process of cable communication and optical communication, Line constant of transmission on primary constant, reflection and crosstalk, communication cable line of types like flat cable, coaxial cable and loaded cable, Install of communication line with types and facility of aerial line, construction method of communication line facility, Measurement of communication line, Carrier communication of summary, PCM communication with Introduction, regeneration relay system sampling and quantization and Electric communication service and general information network with mobile communication technique and satellite communication system.

Humidification of the Arctic: Effects of more open ocean water on land temperatures and tundra productivity along continental and maritime bioclimate transects

Science.gov (United States)

Bhatt, U. S.; Walker, D. A.; Raynolds, M. K.; Epstein, H. E.

2017-12-01

Amplified Arctic warming linked to declining sea-ice extent led to generally enhanced productivity of the tundra biome during the period 1982-2008. After about 2002, coinciding with a recent precipitous decline in sea ice, large areas of the Arctic began showing reversals of previous positive productivity trends. To better understand these recent vegetation productivity declines and whether they are associated with differences in a general humidification of portions of the Arctic, we focus analysis on two transects with ground information: the more continental North America Arctic Transect (NAAT) and the more maritime Eurasia Arctic Transect (EAT). We compare ground information with satellite-derived trends in open water, summer terrestrial temperatures, and vegetation greenness and changes in continentality of the two transects, as indicated by the differences in the annual maximum and minimum mean monthly temperatures. Areas adjacent to perennial sea ice along in the northern parts of the NAAT exhibit climates with positive trends in summer warmth, but negative greening trends, possibly due to soil drying. Southern parts of the NAAT in the vicinity of more open water show positive greenness trends. Along the EAT, cooling midsummer conditions and reduced greenness appear to be caused by cloudier conditions, and possibly later snow melt during the period of maximum potential photosynthesis. Ground-based environmental and vegetation data indicate that biomass, particularly moss biomass is much greater along the more maritime EAT, indicating a buffering effect of the vegetation that will act to damp productivity as humidification of the Arctic proceeds. This multi-scale analysis is one step in the direction of understanding the drivers of tundra vegetation productivity in the Arctic.

Optical Variability of Narrow-line and Broad-line Seyfert 1 Galaxies

Science.gov (United States)

Rakshit, Suvendu; Stalin, C. S.

2017-06-01

We studied the optical variability (OV) of a large sample of narrow-line Seyfert 1 (NLSy1) and broad-line Seyfert 1 (BLSy1) galaxies with z anti-correlated with Fe II strength but correlated with the width of the Hβ line. The well-known anti-correlation of variability-luminosity and the variability-Eddington ratio is present in our data. Among the radio-loud sample, variability amplitude is found to be correlated with radio-loudness and radio-power, suggesting that jets also play an important role in the OV in radio-loud objects, in addition to the Eddington ratio, which is the main driving factor of OV in radio-quiet sources.

Analysis of microcontaminants in aqueous samples by fully automated on-line solid-phase extraction-gas chromatography-mass selective detection.

NARCIS (Netherlands)

Louter, A.J.H.; van Beekvelt, C.A.; Cid Montanes, P.; Slobodník, J.; Vreuls, J.J.; Brinkman, U.A.T.

1996-01-01

The trace-level analysis of unknown organic pollutants in water requires the use of fast and sensitive methods which also provide structural information. In the present study, an on-line technique was used which combines sample preparation by means of solid-phase extraction (SPE) on a small

Phenotypic variation in California populations of valley oak (Quercus lobata Née) sampled along elevational gradients

Science.gov (United States)

Ana L. Albarrán-Lara; Jessica W. Wright; Paul F. Gugger; Annette Delfino-Mix; Juan Manuel Peñaloza-Ramírez; Victoria L. Sork

2015-01-01

California oaks exhibit tremendous phenotypic variation throughout their range. This variation reflects phenotypic plasticity in tree response to local environmental conditions as well as genetic differences underlying those phenotypes. In this study, we analyze phenotypic variation in leaf traits for valley oak adults sampled along three elevational transects and in...

FBSAD Recruit Reef Fish Belt Transect Survey at Hawaii Island (Big Island), Main Hawaiian Islands, 2005 (NODC Accession 0046935)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Shore-based belt transects were conducted at 8-13 m depths at 3 longshore sites on the leeward coast (North and South Kohala districts) of the Big Island (Hawaii...

A simulation approach to assessing sampling strategies for insect pests: an example with the balsam gall midge.

Directory of Open Access Journals (Sweden)

R Drew Carleton

Full Text Available Estimation of pest density is a basic requirement for integrated pest management in agriculture and forestry, and efficiency in density estimation is a common goal. Sequential sampling techniques promise efficient sampling, but their application can involve cumbersome mathematics and/or intensive warm-up sampling when pests have complex within- or between-site distributions. We provide tools for assessing the efficiency of sequential sampling and of alternative, simpler sampling plans, using computer simulation with "pre-sampling" data. We illustrate our approach using data for balsam gall midge (Paradiplosis tumifex attack in Christmas tree farms. Paradiplosis tumifex proved recalcitrant to sequential sampling techniques. Midge distributions could not be fit by a common negative binomial distribution across sites. Local parameterization, using warm-up samples to estimate the clumping parameter k for each site, performed poorly: k estimates were unreliable even for samples of n ∼ 100 trees. These methods were further confounded by significant within-site spatial autocorrelation. Much simpler sampling schemes, involving random or belt-transect sampling to preset sample sizes, were effective and efficient for P. tumifex. Sampling via belt transects (through the longest dimension of a stand was the most efficient, with sample means converging on true mean density for sample sizes of n ∼ 25-40 trees. Pre-sampling and simulation techniques provide a simple method for assessing sampling strategies for estimating insect infestation. We suspect that many pests will resemble P. tumifex in challenging the assumptions of sequential sampling methods. Our software will allow practitioners to optimize sampling strategies before they are brought to real-world applications, while potentially avoiding the need for the cumbersome calculations required for sequential sampling methods.

Dentate gyrus and hilus transection blocks seizure propagation and granule cell dispersion in a mouse model for mesial temporal lobe epilepsy.

Science.gov (United States)

Pallud, Johan; Häussler, Ute; Langlois, Mélanie; Hamelin, Sophie; Devaux, Bertrand; Deransart, Colin; Depaulis, Antoine

2011-03-01

Epilepsy-associated changes of the anatomical organization of the dentate gyrus and hilus may play a critical role in the initiation and propagation of seizures in mesial temporal lobe epilepsy (MTLE). This study evaluated the role of longitudinal projections in the propagation of hippocampal paroxysmal discharges (HPD) in dorsal hippocampus by performing a selective transection in a mouse model for MTLE obtained by a single unilateral intrahippocampal injection of kainic acid (KA). Full transections of the dentate gyrus and hilus were performed in the transverse axis at 22 days after KA injection when spontaneous HPD were fully developed. They: (i) significantly reduced the occurrence of HPD; (ii) increased their duration at the KA injection site; (iii) abolished their spread along the longitudinal axis of the hippocampal formation and; (iv) limited granule cell dispersion (GCD) of the dentate gyrus posterior to the transection. These data suggest that: (i) longitudinal projections through the dentate gyrus and hilus are involved in HPD spread; (ii) distant hippocampal circuits participate in the generation and cessation of HPD and; (iii) GCD requires continuous HPD to develop, even when seizures are established. Our data reveal a critical role for longitudinal projections in the generation and spread of hippocampal seizures. Copyright © 2010 Wiley-Liss, Inc.

Purity, adulteration and price of drugs bought on-line versus off-line in the Netherlands.

Science.gov (United States)

van der Gouwe, Daan; Brunt, Tibor M; van Laar, Margriet; van der Pol, Peggy

2017-04-01

On-line drug markets flourish and consumers have high expectations of on-line quality and drug value. The aim of this study was to (i) describe on-line drug purchases and (ii) compare on-line with off-line purchased drugs regarding purity, adulteration and price. Comparison of laboratory analyses of 32 663 drug consumer samples (stimulants and hallucinogens) purchased between January 2013 and January 2016, 928 of which were bought on-line. The Netherlands. Primary outcome measures were (i) the percentage of samples purchased on-line and (ii) the chemical purity of powders (or dosage per tablet); adulteration; and the price per gram, blotter or tablet of drugs bought on-line compared with drugs bought off-line. The proportion of drug samples purchased on-line increased from 1.4% in 2013 to 4.1% in 2015. The frequency varied widely, from a maximum of 6% for controlled, traditional substances [ecstasy tablets, 3,4-methylenedioxy-methamphetamine (MDMA) powder, amphetamine powder, cocaine powder, 4-bromo-2,5-dimethoxyphenethylamine (2C-B) and lysergic acid diethylamide (LSD)] to more than a third for new psychoactive substances (NPS) [4-fluoroamphetamine (4-FA), 5/6-(2-aminopropyl)benzofuran (5/6-APB) and methoxetamine (MXE)]. There were no large differences in drug purity, yet small but statistically significant differences were found for 4-FA (on-line 59% versus off-line 52% purity for 4-FA on average, P = 0.001), MDMA powders (45 versus 61% purity for MDMA, P = 0.02), 2C-B tablets (21 versus 10 mg 2C-B/tablet dosage, P = 0.49) and ecstasy tablets (131 versus 121 mg MDMA/tablet dosage, P = 0.05). The proportion of adulterated samples purchased on-line and off-line did not differ, except for 4-FA powder, being less adulterated on-line (χ 2  = 8.3; P < 0.02). Drug prices were mainly higher on-line, ranging for various drugs from 10 to 23% higher than that of drugs purchased off-line (six of 10 substances: P < 0.05). Dutch drug users increasingly

Influence of the operating parameters and of the sample introduction system on time correlation of line intensities using an axially viewed CCD-based ICP-AES system

Energy Technology Data Exchange (ETDEWEB)

Grotti, Marco, E-mail: grotti@chimica.unige.i [Dipartimento di Chimica e Chimica Industriale, Via Dodecaneso 31, 16146 Genova (Italy); Todoli, Jose Luis [Departamento de Quimica Analitica, Nutricion y Bromatologia, Universidad de Alicante, 03080, Alicante (Spain); Mermet, Jean Michel [Spectroscopy Forever, 01390 Tramoyes (France)

2010-02-15

The influence of the acquisition and operating parameters on time correlation between emission line intensities was investigated using axially viewed inductively coupled plasma-multichannel-based emission spectrometry and various sample introduction systems. It was found that to obtain flicker-noise limited signals, necessary to compensate for time-correlated signal fluctuations by internal standardization, the flicker-noise magnitude of the sample introduction system, the integration time and the emission line intensity had to be considered. The highest correlation between lines was observed for ultrasonic nebulization with desolvatation, the noisiest system among those considered, for which the contribution of the uncorrelated shot-noise was negligible. In contrast, for sample introduction systems characterized by lower flicker-noise levels, shot-noise led to high, non-correlated RSD values, making the internal standard method to be much less efficient. To minimize shot-noise, time correlation was improved by increasing the emission line intensities and the integration time. Improvement in repeatability did not depend only on time correlation, but also on the ratio between the relative standard deviations of the analytical and reference lines. The best signal compensation was obtained when RSD values of the reference and analytical lines were similar, which is usually obtained when the system is flicker-noise limited, while departure from similarity can lead to a degradation of repeatability when using the internal standard method. Moreover, the use of so-called robust plasma conditions, i.e. a high power (1500 W) along with a low carrier gas flow rate (0.8 L/min) improved also the compensation. Finally, high correlation and consequent improvement in repeatability by internal standardization was observed also in the presence of complex matrices (sediment and soil samples), although a matrix-induced degradation of the correlation between lines was generally

FBSAB RECRUIT Reef Fish Belt Transect Survey at Hawaii Island (Big Island), Main Hawaiian Islands, 2009 (NODC Accession 0073870)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Shore-based belt transects were conducted at 1 to ~ 5 m depths at a total two (2) sites on the leeward coast (South Kohala district) of the Big Island (Hawaii...

[Analysis of phthalate esters in plastic-packaging bags on-line sample stacking-microemulsion electrokinetic chromatography].

Science.gov (United States)

Xiao, Jia; Huang, Ying; Wang, Minyi; Chen, Guonan

2012-09-01

Two convenient, effective, and reproducible methods using microemulsion electrokinetic chromatography (MEEKC)-normal stacking mode (NSM) and reversed electrode polarity stacking mode (REPSM) were developed for the on-line sample stacking of phthalate esters (PAEs). REPSM coupled with MEEKC increased the sensitivity of 937.5 to 7,143 times for four PAEs compared to the conventional MEEKC. The separating conditions in the MEEKC method were studied, and many factors influencing the two sample stacking processes were investigated in detail. The optimum sample matrices for the two stacking methods were as follows: 30 mmol/L sodium cholate (SC) and 30.0 mmol/L borate (pH 8.5). Additionally, sample injections as large as 3.45 kPa x 40 s and 3.45 kPa x 90 s were applied for NSM-MEEKC and REPSM-MEEKC, respectively. The linear relationship and reproducibility were also examined. Under the optimum conditions, the detection limits (S/N = 3) of the PAEs were in the ranges of 0.021 - 0.33 mg/L and 0.7 - 4 microg/L for NSM-MEEKC and REPSM-MEEKC, respectively. The proposed REPSM-MEEKC has been successfully applied to determine PAEs in plastic-packaging bags, and the spiked recoveries were in the range of 89.1% - 105.6% with satisfactory results.

FBSAB PREDATOR Reef Fish Belt Transect Surveys at Hawaii Island (Big Island), Main Hawaiian Islands, 2009 (NODC Accession 0073870)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Shore-based belt transects were conducted at 1 to ~5 m depths at a total two (2) sites: at 2 longshore sites on the leeward coast (South Kohala district) of the Big...

An integrated sample pretreatment platform for quantitative N-glycoproteome analysis with combination of on-line glycopeptide enrichment, deglycosylation and dimethyl labeling

Energy Technology Data Exchange (ETDEWEB)

Weng, Yejing; Qu, Yanyan; Jiang, Hao; Wu, Qi [National Chromatographic Research and Analysis Center, Key Laboratory of Separation Science for Analytical Chemistry, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023 (China); University of the Chinese Academy of Sciences, Beijing 100039 (China); Zhang, Lihua, E-mail: lihuazhang@dicp.ac.cn [National Chromatographic Research and Analysis Center, Key Laboratory of Separation Science for Analytical Chemistry, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023 (China); Yuan, Huiming [National Chromatographic Research and Analysis Center, Key Laboratory of Separation Science for Analytical Chemistry, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023 (China); Zhou, Yuan [National Chromatographic Research and Analysis Center, Key Laboratory of Separation Science for Analytical Chemistry, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023 (China); University of the Chinese Academy of Sciences, Beijing 100039 (China); Zhang, Xiaodan; Zhang, Yukui [National Chromatographic Research and Analysis Center, Key Laboratory of Separation Science for Analytical Chemistry, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023 (China)

2014-06-23

Highlights: • An integrated platform for quantitative N-glycoproteome analysis was established. • On-line enrichment, deglycosylation and labeling could be achieved within 160 min. • A N{sub 2}-assisted interface was applied to improve the compatibility of the platform. • The platform exhibited improved quantification accuracy, precision and throughput. - Abstract: Relative quantification of N-glycoproteomes shows great promise for the discovery of candidate biomarkers and therapeutic targets. The traditional protocol for quantitative analysis of glycoproteomes is usually off-line performed, and suffers from long sample preparation time, and the risk of sample loss or contamination due to manual manipulation. In this study, a novel integrated sample preparation platform for quantitative N-glycoproteome analysis was established, with combination of online N-glycopeptide capture by a HILIC column, sample buffer exchange by a N{sub 2}-assisted HILIC–RPLC interface, deglycosylation by a hydrophilic PNGase F immobilized enzymatic reactor (hIMER) and solid dimethyl labeling on a C18 precolumn. To evaluate the performance of such a platform, two equal aliquots of immunoglobulin G (IgG) digests were sequentially pretreated, followed by MALDI-TOF MS analysis. The signal intensity ratio of heavy/light (H/L) labeled deglycosylated peptides with the equal aliquots was 1.00 (RSD = 6.2%, n = 3), much better than those obtained by the offline protocol, with H/L ratio as 0.76 (RSD = 11.6%, n = 3). Additionally, the total on-line sample preparation time was greatly shortened to 160 min, much faster than that of offline approach (24 h). Furthermore, such an integrated pretreatment platform was successfully applied to analyze the two kinds of hepatocarcinoma ascites syngeneic cell lines with high (Hca-F) and low (Hca-P) lymph node metastasis rates. For H/L labeled Hca-P lysates with the equal aliquots, 99.6% of log 2 ratios (H/L) of quantified glycopeptides ranged from −1

Outcome of prolonged acute vena cava occlusion after iatrogenic transection and repair in a dog

OpenAIRE

Halwagi, Marie-Chantal; Crawford, Evan; Hoddinott, Katie; Oblak, Michelle L.

2017-01-01

A 12-year-old castrated male Airedale terrier dog was diagnosed with a hepatocellular carcinoma in the right medial liver lobe. During tumor resection, inadvertent stapling and transection of the caudal vena cava occurred. Complete caval occlusion was required for 18 minutes and primary anastomosis was completed. The dog received 2 blood transfusions and developed mild pelvic limb edema after surgery. Computed tomography evaluation 9 months after surgery showed collateral circulation and susp...

Black hole mass estimates and emission-line properties of a sample of redshift z > 6.5 quasars

Energy Technology Data Exchange (ETDEWEB)

De Rosa, Gisella; Peterson, Bradley M.; Frank, Stephan [Department of Astronomy, The Ohio State University, 140 West 18th Avenue, Columbus, OH 43210 (United States); Venemans, Bram P.; Decarli, Roberto; Walter, Fabian [Max-Planck-Institut für Astronomie, Königstuhl 17, D-69117 Heidelberg (Germany); Gennaro, Mario [Space Telescope Science Institute, 3700 San Martin Drive, Baltimore, MD 21218 (United States); Simcoe, Robert A. [MIT-Kavli Center for Astrophysics and Space Research, 77 Massachusetts Avenue, Cambridge, MA 02139 (United States); Dietrich, Matthias [Department of Physics and Astronomy, Ohio University, Clippinger Lab 251B, Athens, OH 45701 (United States); McMahon, Richard G.; Hewett, Paul C. [Institute of Astronomy, University of Cambridge, Madingley Road, Cambridge CB3 0HA (United Kingdom); Mortlock, Daniel J. [Astrophysics Group, Imperial College London, Blackett Laboratory, Prince Consort Road, London, SW7 2AZ (United Kingdom); Simpson, Chris [Astrophysics Research Institute, Liverpool John Moores University, Liverpool Science Park, 146 Brownlow Hill, Liverpool L3 5RF (United Kingdom)

2014-08-01

We present the analysis of optical and near-infrared spectra of the only four z > 6.5 quasars known to date, discovered in the UKIDSS-LAS and VISTA-VIKING surveys. Our data set consists of new Very Large Telescope/X-Shooter and Magellan/FIRE observations. These are the best optical/NIR spectroscopic data that are likely to be obtained for the z > 6.5 sample using current 6-10 m facilities. We estimate the black hole (BH) mass, the Eddington ratio, and the Si IV/C IV, C III]/C IV, and Fe II/Mg II emission-line flux ratios. We perform spectral modeling using a procedure that allows us to derive a probability distribution for the continuum components and to obtain the quasar properties weighted upon the underlying distribution of continuum models. The z > 6.5 quasars show the same emission properties as their counterparts at lower redshifts. The z > 6.5 quasars host BHs with masses of ∼10{sup 9} M{sub ☉} that are accreting close to the Eddington luminosity ((log(L{sub Bol}/L{sub Edd})) = –0.4 ± 0.2), in agreement with what has been observed for a sample of 4.0 < z < 6.5 quasars. By comparing the Si IV/C IV and C III]/C IV flux ratios with the results obtained from luminosity-matched samples at z ∼ 6 and 2 ≤ z ≤ 4.5, we find no evidence of evolution of the line ratios with cosmic time. We compare the measured Fe II/Mg II flux ratios with those obtained for a sample of 4.0 < z < 6.4 sources. The two samples are analyzed using a consistent procedure. There is no evidence that the Fe II/Mg II flux ratio evolves between z = 7 and z = 4. Under the assumption that the Fe II/Mg II traces the Fe/Mg abundance ratio, this implies the presence of major episodes of chemical enrichment in the quasar hosts in the first ∼0.8 Gyr after the Big Bang.

Video transect images from the Hawaii Coral Reef Assessment and Monitoring Program (CRAMP): data from year 1999 (NODC Accession 0000671)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — This dataset consists of video transect images (JPEG files) from CRAMP surveys taken in 1999 at 26 sites, some of which had multiple depths. Estimates of substrate...

Digital Still Transect Images from the Hawaii Coral Reef Assessment and Monitoring Program (CRAMP): Data from 2004 (NODC Accession 0037908)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — This dataset consists of video transect images (JPG files) from CRAMP surveys taken in 2004 at 6 sites, some of which had multiple depths. Digital images are...

Evaluation of changes in vertical ground reaction forces as indicators of meniscal damage after transection of the cranial cruciate ligament in dogs.

Science.gov (United States)

Trumble, Troy N; Billinghurst, R Clark; Bendele, Alison M; McIlwraith, C Wayne

2005-01-01

To determine whether decreases in peak vertical force of the hind limb after transection of the cranial cruciate ligament (CrCL) would be indicative of medial meniscal damage in dogs. 39 purpose-bred adult male Walker Hounds. The right CrCL was transected arthroscopically. Force plate measurements of the right hind limb were made prior to and 2, 4, 10, and 18 weeks after transection of the CrCL. Only dogs with > or =10% decreases in peak vertical force after week 2 were considered to have potential meniscal damage. Dogs that did not have > or =10% decreases in peak vertical force at any time point after week 2 were assigned to group 1. Group 2 dogs had > or =10% decreases in peak vertical force from weeks 2 to 4 only. Group 3 and 4 dogs had > or =10% decreases in peak vertical force from weeks 4 to 10 only or from weeks 10 to 18 only, respectively. Damage to menisci and articular cartilage was graded at week 18, and grades for groups 2 to 4 were compared with those of group 1. The percentage change in peak vertical force and impulse area was significantly different in groups 2 (n = 4), 3 (4), and 4 (4) at the end of each measurement period (weeks 4, 10, and 18, respectively) than in group 1 (27). The meniscal grade for groups 2 to 4 was significantly higher than for group 1. A > or =10% decrease in peak vertical force had sensitivity of 52% and accuracy of 72% for identifying dogs with moderate to severe medial meniscal damage. In dogs with transected or ruptured CrCLs, force plate analysis can detect acute exacerbation of lameness, which may be the result of secondary meniscal damage, and provide an objective noninvasive technique that delineates the temporal pattern of medial meniscal injury.

Wet nitrogen deposition across the urban-intensive agricultural-rural transect of a small urban area in southwest China.

Science.gov (United States)

Deng, Ouping; Zhang, Shirong; Deng, Liangji; Zhang, Chunlong; Fei, Jianbo

2018-03-01

Understanding of the spatial and temporal variation of the flux of atmospheric nitrogen (N) deposition is essential for assessment of its impact on ecosystems. However, little attention has been paid to the variability of N deposition across urban-intensive agricultural-rural transects. A continuous 2-year observational study (from January 2015 to December 2016) was conducted to determine wet N deposition across the urban-intensive agricultural-rural transect of a small urban area in southwest China. Significantly spatial and temporal variations were found in the research area. Along the urban-intensive agricultural-rural transect, the TN and NH 4 + -N deposition first increased and then decreased, and the NO 3 - -N and dissolved organic N (DON) deposition decreased continuously. Wet N deposition was mainly affected by the districts of agro-facilities, roads and build up lands. Wet NH 4 + -N deposition had non-seasonal emission sources including industrial emissions and urban excretory wastes in urban districts and seasonal emission sources such as fertilizer and manure volatilization in the other districts. However, wet NO 3 - -N deposition had seasonal emission sources such as industrial emissions and fireworks in urban district and non-seasonal emission sources such as transportation in the other districts. Deposition of DON was likely to have had similar sources to NO 3 - -N deposition in rural district, and high-temperature-dependent sources in urban and intensive agricultural districts. Considering the annual wet TN deposition in the intensive agricultural district was about 11.1% of the annual N fertilizer input, N fertilizer rates of crops should be reduced in this region to avoid the excessive application, and the risk of N emissions to the environment.

Radial line-scans as representative sampling strategy in dried-droplet laser ablation of liquid samples deposited on pre-cut filter paper disks

Energy Technology Data Exchange (ETDEWEB)

Nischkauer, Winfried [Institute of Chemical Technologies and Analytics, Vienna University of Technology, Vienna (Austria); Department of Analytical Chemistry, Ghent University, Ghent (Belgium); Vanhaecke, Frank [Department of Analytical Chemistry, Ghent University, Ghent (Belgium); Bernacchi, Sébastien; Herwig, Christoph [Institute of Chemical Engineering, Vienna University of Technology, Vienna (Austria); Limbeck, Andreas, E-mail: Andreas.Limbeck@tuwien.ac.at [Institute of Chemical Technologies and Analytics, Vienna University of Technology, Vienna (Austria)

2014-11-01

Nebulising liquid samples and using the aerosol thus obtained for further analysis is the standard method in many current analytical techniques, also with inductively coupled plasma (ICP)-based devices. With such a set-up, quantification via external calibration is usually straightforward for samples with aqueous or close-to-aqueous matrix composition. However, there is a variety of more complex samples. Such samples can be found in medical, biological, technological and industrial contexts and can range from body fluids, like blood or urine, to fuel additives or fermentation broths. Specialized nebulizer systems or careful digestion and dilution are required to tackle such demanding sample matrices. One alternative approach is to convert the liquid into a dried solid and to use laser ablation for sample introduction. Up to now, this approach required the application of internal standards or matrix-adjusted calibration due to matrix effects. In this contribution, we show a way to circumvent these matrix effects while using simple external calibration for quantification. The principle of representative sampling that we propose uses radial line-scans across the dried residue. This compensates for centro-symmetric inhomogeneities typically observed in dried spots. The effectiveness of the proposed sampling strategy is exemplified via the determination of phosphorus in biochemical fermentation media. However, the universal viability of the presented measurement protocol is postulated. Detection limits using laser ablation-ICP-optical emission spectrometry were in the order of 40 μg mL{sup −1} with a reproducibility of 10 % relative standard deviation (n = 4, concentration = 10 times the quantification limit). The reported sensitivity is fit-for-purpose in the biochemical context described here, but could be improved using ICP-mass spectrometry, if future analytical tasks would require it. Trueness of the proposed method was investigated by cross-validation with

Quantitative Assessment of Tendon Healing by Using MR T2 Mapping in a Rabbit Achilles Tendon Transection Model Treated with Platelet-rich Plasma.

Science.gov (United States)

Fukawa, Taisuke; Yamaguchi, Satoshi; Watanabe, Atsuya; Sasho, Takahisa; Akagi, Ryuichiro; Muramatsu, Yuta; Akatsu, Yorikazu; Katsuragi, Joe; Endo, Jun; Osone, Fumio; Sato, Yasunori; Okubo, Toshiyuki; Takahashi, Kazuhisa

2015-09-01

To determine if magnetic resonance (MR) imaging T2 mapping can be used to quantify histologic tendon healing by using a rabbit Achilles tendon transection model treated with platelet-rich plasma (PRP). Experiments were approved by the Institutional Animal Care and Use Committee. The Achilles tendons of 24 New Zealand white rabbits (48 limbs) were surgically transected, and PRP (in the test group) or saline (in the control group) was injected into the transection site. The rabbits were sacrificed 2, 4, 8, and 12 weeks after surgery. Thereafter, T2 mapping and histologic evaluations were performed by using the Bonar scale. A mixed-model multivariate analysis of variance was used to test the effects of time and PRP treatment on the T2 value and Bonar grade, respectively. The correlation between the T2 value and Bonar grade was also assessed by using the Spearman correlation coefficient. The Bonar scale values decreased in both groups during tendon healing. The T2 value also shortened over time (P tendon healing. While T2 and Bonar grade were lower at all time points in tendons treated with PRP, there was no significant difference between the treatment and control tendons.

Evaluation of Partial Transection versus Synovial Debridement of the ACL as Novel Canine Models for Management of ACL Injuries.

Science.gov (United States)

Bozynski, Chantelle C; Kuroki, Keiichi; Stannard, James P; Smith, Patrick A; Stoker, Aaron M; Cook, Cristi R; Cook, James L

2015-10-01

A major hurdle in investigating important clinical questions in knee ligament treatment is a lack of valid translational animal models. This study characterizes the effects of partial transection versus synovial debridement of the anterior (cranial) cruciate ligament (ACL) in dogs. A total of 27 adult purpose-bred research hounds underwent surgery and were assessed over the following 8 weeks. Dogs were randomized into the following three ACL status groups: sham control (n = 9), intact ACL with synovial debridement (exposed ACL) (n = 9), and partial transection of the ACL (partial tear ACL) (n = 9). Dogs in the exposed ACL group and partial tear ACL group had significantly (p < 0.05) more severe lameness, pain, effusion, reduced function, and reduced comfortable range of motion compared with controls, with the partial tear ACL group being most severely affected. More severe ACL and whole-joint pathology, and radiographic scores for osteoarthritis were present in the partial tear ACL group compared with exposed and/or sham control group. On the basis of these findings, biologic components of ACL injury (exposed ACL) played a role in whole-joint inflammation, but the clinical and pathological effects were more severe when both biologic and biomechanical components were present (i.e., partial tear ACL). These novel canine models were successfully developed to evaluate partial transection versus synovial debridement of the ACL and these models will be used to evaluate treatment options for acute management of ACL injuries. Thieme Medical Publishers 333 Seventh Avenue, New York, NY 10001, USA.

Radial line-scans as representative sampling strategy in dried-droplet laser ablation of liquid samples deposited on pre-cut filter paper disks.

Science.gov (United States)

Nischkauer, Winfried; Vanhaecke, Frank; Bernacchi, Sébastien; Herwig, Christoph; Limbeck, Andreas

2014-11-01

Nebulising liquid samples and using the aerosol thus obtained for further analysis is the standard method in many current analytical techniques, also with inductively coupled plasma (ICP)-based devices. With such a set-up, quantification via external calibration is usually straightforward for samples with aqueous or close-to-aqueous matrix composition. However, there is a variety of more complex samples. Such samples can be found in medical, biological, technological and industrial contexts and can range from body fluids, like blood or urine, to fuel additives or fermentation broths. Specialized nebulizer systems or careful digestion and dilution are required to tackle such demanding sample matrices. One alternative approach is to convert the liquid into a dried solid and to use laser ablation for sample introduction. Up to now, this approach required the application of internal standards or matrix-adjusted calibration due to matrix effects. In this contribution, we show a way to circumvent these matrix effects while using simple external calibration for quantification. The principle of representative sampling that we propose uses radial line-scans across the dried residue. This compensates for centro-symmetric inhomogeneities typically observed in dried spots. The effectiveness of the proposed sampling strategy is exemplified via the determination of phosphorus in biochemical fermentation media. However, the universal viability of the presented measurement protocol is postulated. Detection limits using laser ablation-ICP-optical emission spectrometry were in the order of 40 μg mL - 1 with a reproducibility of 10 % relative standard deviation (n = 4, concentration = 10 times the quantification limit). The reported sensitivity is fit-for-purpose in the biochemical context described here, but could be improved using ICP-mass spectrometry, if future analytical tasks would require it. Trueness of the proposed method was investigated by cross-validation with

Radial line-scans as representative sampling strategy in dried-droplet laser ablation of liquid samples deposited on pre-cut filter paper disks

Science.gov (United States)

Nischkauer, Winfried; Vanhaecke, Frank; Bernacchi, Sébastien; Herwig, Christoph; Limbeck, Andreas

2014-11-01

Nebulising liquid samples and using the aerosol thus obtained for further analysis is the standard method in many current analytical techniques, also with inductively coupled plasma (ICP)-based devices. With such a set-up, quantification via external calibration is usually straightforward for samples with aqueous or close-to-aqueous matrix composition. However, there is a variety of more complex samples. Such samples can be found in medical, biological, technological and industrial contexts and can range from body fluids, like blood or urine, to fuel additives or fermentation broths. Specialized nebulizer systems or careful digestion and dilution are required to tackle such demanding sample matrices. One alternative approach is to convert the liquid into a dried solid and to use laser ablation for sample introduction. Up to now, this approach required the application of internal standards or matrix-adjusted calibration due to matrix effects. In this contribution, we show a way to circumvent these matrix effects while using simple external calibration for quantification. The principle of representative sampling that we propose uses radial line-scans across the dried residue. This compensates for centro-symmetric inhomogeneities typically observed in dried spots. The effectiveness of the proposed sampling strategy is exemplified via the determination of phosphorus in biochemical fermentation media. However, the universal viability of the presented measurement protocol is postulated. Detection limits using laser ablation-ICP-optical emission spectrometry were in the order of 40 μg mL- 1 with a reproducibility of 10 % relative standard deviation (n = 4, concentration = 10 times the quantification limit). The reported sensitivity is fit-for-purpose in the biochemical context described here, but could be improved using ICP-mass spectrometry, if future analytical tasks would require it. Trueness of the proposed method was investigated by cross-validation with

Upper Cretaceous molluscan record along a transect from Virden, New Mexico, to Del Rio, Texas

Science.gov (United States)

Cobban, W.A.; Hook, S.C.; McKinney, K.C.

2008-01-01

Updated age assignments and new collections of molluscan fossils from lower Cenomanian through upper Campanian strata in Texas permit a much refined biostratigraphic correlation with the rocks of New Mexico and the Western Interior. Generic names of many Late Cretaceous ammonites and inoceramid bivalves from Texas are updated to permit this correlation. Strata correlated in the west-to-east transect include the lower Cenomanian Beartooth Quartzite and Sarten Sandstone of southwest New Mexico, and the Eagle Mountains Formation, Del Rio Clay, Buda Limestone, and. basal beds of the Chispa Summit, Ojinaga, and Boquillas Formations of the Texas-Mexico border area. Middle Cenomanian strata are lacking in southwestern New Mexico but are present in the lower parts of the Chispa Summit and Boquillas Formations in southwest Texas. Upper Cenomanian and lower Turonian rocks are present at many localities in New Mexico and Texas in the Mancos Shale and Chispa Summit, Ojinaga, and Boquillas Formations. Middle Turonian and younger rocks seem to be entirely nonmarine in southwestern New Mexico, but they are marine in the Rio Grande area in the Chispa. Summit, Ojinaga, and Boquillas Formations. The upper part of the Chispa Summit and Boquillas contain late Turonian fossils. Rocks of Coniacian and Santonian age are present high in the Chispa Summit, Ojinaga, and Boquillas Formations, and in the lower part of the Austin. The San Carlos, Aguja, Pen, and Austin Formations contain fossils of Campanian age. Fossils representing at least 38 Upper Cretaceous ammonite zones are present along the transect. Collections made in recent years in southwestern New Mexico and at Sierra de Cristo Rey just west of downtown El Paso, Texas, have been well treated and do not need revision. Taxonomic names and zonations published in the pre-1970 literature on the Rio Grande area of Texas have been updated. New fossil collections from the Big Bend National Park, Texas, allow for a much refined correlation

A transect through a clastic-swamp to peat swamp ecotone in the Springifled Coal, Middle Pennsylvanian age of Indiana, USA

Energy Technology Data Exchange (ETDEWEB)

Phillips, T.L.; DiMichele, W.A. [University of Illinois, Urbana, IL (United States). Dept. of Plant Biology

1998-04-01

Permineralized fossil plants in coal balls were collected along a kilometer transect through an organic-rich shale in the Springifled Coal in southwestern Indiana. The organic shale is an upper bench of the Springfield Coal in an area where the coal is split into an upper and lower bench by a complex system of clastics that originated as a splay. The clastic wedge, described as the Folsomville Member/Leslie Cemetery paleochannel, is up to 6 km wide and 15 m thick. The transect being approximately 100 m from the edge of the clastic wedge that splits the coal seam and follows the upper bench of coal over and toward the center of the clastic wedge. The dominant elements of the vegetation were the lycopsid tree Paralycopodites brevifolius and several species of medullosan pteridosperms. This report confirms the ecotonal habitats of this vegetation.

BROAD ABSORPTION LINE DISAPPEARANCE ON MULTI-YEAR TIMESCALES IN A LARGE QUASAR SAMPLE

Energy Technology Data Exchange (ETDEWEB)

Filiz Ak, N.; Brandt, W. N.; Schneider, D. P. [Department of Astronomy and Astrophysics, Pennsylvania State University, University Park, PA 16802 (United States); Hall, P. B. [Department of Physics and Astronomy, York University, 4700 Keele St., Toronto, Ontario M3J 1P3 (Canada); Anderson, S. F.; Gibson, R. R. [Astronomy Department, University of Washington, Seattle, WA 98195 (United States); Lundgren, B. F. [Department of Physics, Yale University, New Haven, CT 06511 (United States); Myers, A. D. [Department of Physics and Astronomy, University of Wyoming, Laramie, WY 82071 (United States); Petitjean, P. [Institut d' Astrophysique de Paris, Universite Paris 6, F-75014, Paris (France); Ross, Nicholas P. [Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Berkeley, CA 92420 (United States); Shen Yue [Harvard-Smithsonian Center for Astrophysics, 60 Garden Street, MS-51, Cambridge, MA 02138 (United States); York, D. G. [Department of Astronomy and Astrophysics, and Enrico Fermi Institute, University of Chicago, 5640 S. Ellis Ave., Chicago, IL 60637 (United States); Bizyaev, D.; Brinkmann, J.; Malanushenko, E.; Oravetz, D. J.; Pan, K.; Simmons, A. E. [Apache Point Observatory, P.O. Box 59, Sunspot, NM 88349-0059 (United States); Weaver, B. A., E-mail: nfilizak@astro.psu.edu [Center for Cosmology and Particle Physics, New York University, New York, NY 10003 (United States)

2012-10-01

We present 21 examples of C IV broad absorption line (BAL) trough disappearance in 19 quasars selected from systematic multi-epoch observations of 582 bright BAL quasars (1.9 < z < 4.5) by the Sloan Digital Sky Survey-I/II (SDSS-I/II) and SDSS-III. The observations span 1.1-3.9 yr rest-frame timescales, longer than have been sampled in many previous BAL variability studies. On these timescales, Almost-Equal-To 2.3% of C IV BAL troughs disappear and Almost-Equal-To 3.3% of BAL quasars show a disappearing trough. These observed frequencies suggest that many C IV BAL absorbers spend on average at most a century along our line of sight to their quasar. Ten of the 19 BAL quasars showing C IV BAL disappearance have apparently transformed from BAL to non-BAL quasars; these are the first reported examples of such transformations. The BAL troughs that disappear tend to be those with small-to-moderate equivalent widths, relatively shallow depths, and high outflow velocities. Other non-disappearing C IV BALs in those nine objects having multiple troughs tend to weaken when one of them disappears, indicating a connection between the disappearing and non-disappearing troughs, even for velocity separations as large as 10,000-15,000 km s{sup -1}. We discuss possible origins of this connection including disk-wind rotation and changes in shielding gas.

Transection of inferior orbital fissure contents for improved access and visibility in orbital surgery.

Science.gov (United States)

Ricketts, Sophie; Chew, Hall F; Sunderland, Ian R P; Kiss, Alex; Fialkov, Jeffrey A

2014-03-01

Selective inferior orbital fissure (IOF) content transection for the purpose of surgical access to the posterior orbital floor is a technique that facilitates visualization of the posterior bony ledges of traumatic orbital floor defects. It also has potential advantages in achieving stable placement of reconstructive materials. Although not new, the surgical technique has not yet been described, and the morbidity of the technique has not been quantified. This article describes the procedure and assesses the morbidity specific to the division of related neural structures. The technique and surgical anatomy are described and illustrated with intraoperative photographs. Postoperative assessment of neural structures relevant to the division of IOF contents is performed. These values are compared with the nonoperated side to evaluate the morbidity of the technique. The technique, which is consistently used by the senior author in the repair of orbital floor defects with very small posterior ledges or which extend to and involve the IOF, facilitates better visualization of the posterior ledge and posterolateral ledge in such cases. Surgical outcomes including facial sensation and lacrimal function on the operated side remain within the reference range and are not significantly different when compared with the contralateral nonoperated side. Selective IOF transection aids in the direct visualization of the posterior bony ledges in the repair of posterior orbital floor defects. It therefore may facilitate the placement of reconstructive materials on bony ledges circumferentially, providing stable reconstruction, potentially reducing implant-related complications without causing increased morbidity.

Optical Variability of Narrow-line and Broad-line Seyfert 1 Galaxies

Energy Technology Data Exchange (ETDEWEB)

Rakshit, Suvendu; Stalin, C. S., E-mail: suvenduat@gmail.com [Indian Institute of Astrophysics, Block II, Koramangala, Bangalore-560034 (India)

2017-06-20

We studied the optical variability (OV) of a large sample of narrow-line Seyfert 1 (NLSy1) and broad-line Seyfert 1 (BLSy1) galaxies with z < 0.8 to investigate any differences in their OV properties. Using archival optical V -band light curves from the Catalina Real Time Transient Survey that span 5–9 years and modeling them using damped random walk, we estimated the amplitude of variability. We found that NLSy1 galaxies as a class show lower amplitude of variability than their broad-line counterparts. In the sample of both NLSy1 and BLSy1 galaxies, radio-loud sources are found to have higher variability amplitude than radio-quiet sources. Considering only sources that are detected in the X-ray band, NLSy1 galaxies are less optically variable than BLSy1 galaxies. The amplitude of variability in the sample of both NLSy1 and BLSy1 galaxies is found to be anti-correlated with Fe ii strength but correlated with the width of the H β line. The well-known anti-correlation of variability–luminosity and the variability–Eddington ratio is present in our data. Among the radio-loud sample, variability amplitude is found to be correlated with radio-loudness and radio-power, suggesting that jets also play an important role in the OV in radio-loud objects, in addition to the Eddington ratio, which is the main driving factor of OV in radio-quiet sources.

Vegetation community structure, composition and distribution pattern ...

African Journals Online (AJOL)

Zaraninge Forest, part of the Coastal Forest Biodiversity Hotspot of Tanzania, is threatened by human activities. The effect of such activities on the ecology of the forest is less known. Nested quadrat sampling technique was used along preestablished transect lines. Trees had a stem density of 521 ha-1, the majority falling in ...

Solid-phase extraction of polar pesticides from environmental water samples on graphitized carbon and Empore-activated carbon disks and on-line coupling to octadecyl-bonded silica analytical columns.

NARCIS (Netherlands)

Slobodník, J.; Oztekizan, O.; Lingeman, H.; Brinkman, U.A.T.

1996-01-01

The suitability of Empore-activated carbon disks (EACD), Envi-Carb graphitized carbon black (GCB) and CPP-50 graphitized carbon for the trace enrichment of polar pesticides from water samples was studied by means of off-line and on-line solid-phase extraction (SPE). In the off-line procedure, 0.5-2

The Effect of a Third Generation Hemostatic Dressing in a Subclavian Artery and Vein Transection Porcine Model

Science.gov (United States)

2014-04-01

small skin incision. The exposed subclavian vessels were treated with lidocaine , transected and allowed to free bleed for thirty seconds prior to...achieve hemorrhage control (Butler & Blackbourne, 2012) is typically ineffective in this region because pressure over the clavicle will not be...cavity depth, and cavity volume. The subclavian vessels were then immersed in 30 mL of 2% lidocaine (Phoenix Pharmaceuticals, St. Joseph, MO) for 10

Development of on-line electrochemical sample pretreatment methods for the analysis of thallium and uranium by ICP-MS

International Nuclear Information System (INIS)

Zhou, F.; Van Berkel, G.J.; Morton, S.J.; Duckworth, D.C.; Adeniyi, W.K.; Keller, J.M.

1995-01-01

Anodic and adsorptive stripping voltammetry (AWV and AdSV, respectively) were performed on-line with a mercury thin-film electrode (MTFE) to effect the selective accumulation and detection of thallium and uranium, respectively. ASV-ICP-MS experiments using thallium as the test element were performed to characterize the behavior of the on-line system for low level and quantitative determinations. Excellent linearity in response was demonstrated for thallium standards ranging from 0.25 ng/L to 50 microg/L. The 1.0 pg/L detection limit calculated from this data for thallium (3σ/sensitivity) was 400 times lower than that of conventional ICP-MS. The ability to overcome sample matrix effects in quantitative determinations was demonstrated by the analysis of an undiluted synthetic urine sample. AdSV-ICP-MS experiments were performed using uranium as the test element to demonstrate the utility of this method for the determination of radiologically important elements. A uranium(VI)-cupferron complex was used to effect adsorptive accumulation of uranium from a 10 microg/L standard solution onto the MTFE. The uranium was chemically stripped from the electrode for subsequent downstream detection by the ICP-MS. The quantitative nature of this method and a modest enhancement of signal levels (∼X10) over those levels obtained with conventional ICP-MS for samples in the microgram/liter concentration range were demonstrated. Modifications to the current system to provide low flow rate operation will allow further optimization of the ASV-ICP-MS and AdSV-ICP-MS combinations

Hydrology and Water Quality of the Rio Chama River, Northern New Mexico: Establishing a Base Line to Manage Flows

Science.gov (United States)

Salvato, L.; Crossey, L. J.

2013-12-01

The Rio Chama is the largest stream tributary to the Rio Grande in northern New Mexico. The river's geographic location in a semiarid region results in high rates of evapotranspiration and highly variable streamflow. The Rio Chama is part of the San Juan-Chama Drinking Water Project, in which water from the San Juan River, southern Colorado, is diverted across the continental divide to the Rio Chama. Surface water moves through Abiquiu, El Vado and Heron Reservoirs to the Rio Grande to supply Albuquerque with potable drinking water. The results of these anthropogenic influences are a modified flow regime, less variability, greater base-flows, and smaller peak flows. We examined selected locations throughout the Rio Chama system to provide base-line water quality data for ongoing studies. This information will contribute to the development of the best plan to optimize flow releases and maximize benefits of the stakeholders and especially the riparian and stream ecosystems. We report results of two sampling trips representing extremes of the hydrograph in summer 2012 and fall 2012. We collected field parameters, processed water samples, and analyzed them for major anions and cations. The geochemistry enables us to better understand the impact of monthly releases of San Juan river water. We captured two points of the river's streamflow range, 54 cubic feet per second in October 2012 and 1,000 cubic feet per second in August 2012 and looked for variability within the results. We found that the reservoirs exhibit varying anion concentrations from samples taken at different depths. We compared stream waters and selected well samples at a stream transect. These samples allowed us to compare shallow ground water with the stream, and they indicated that the changes in ground water are attributed to sulfate reduction. The anion and cation inputs were most likely derived from gypsum, calcite, and salts, as there are many creeks discharging into the Rio Chama whose drainage

Boosting Lyα and He II λ1640 Line Fluxes from Population III Galaxies: Stochastic IMF Sampling and Departures from Case-B

Science.gov (United States)

Mas-Ribas, Lluís; Dijkstra, Mark; Forero-Romero, Jaime E.

2016-12-01

We revisit calculations of nebular hydrogen Lyα and He II λ1640 line strengths for Population III (Pop III) galaxies, undergoing continuous, and bursts of, star formation. We focus on initial mass functions (IMFs) motivated by recent theoretical studies, which generally span a lower range of stellar masses than earlier works. We also account for case-B departures and the stochastic sampling of the IMF. In agreement with previous work, we find that departures from case-B can enhance the Lyα flux by a factor of a few, but we argue that this enhancement is driven mainly by collisional excitation and ionization, and not due to photoionization from the n = 2 state of atomic hydrogen. The increased sensitivity of the Lyα flux to the high-energy end of the galaxy spectrum makes it more subject to stochastic sampling of the IMF. The latter introduces a dispersion in the predicted nebular line fluxes around the deterministic value by as much as a factor of ˜4. In contrast, the stochastic sampling of the IMF has less impact on the emerging Lyman Werner photon flux. When case-B departures and stochasticity effects are combined, nebular line emission from Pop III galaxies can be up to one order of magnitude brighter than predicted by “standard” calculations that do not include these effects. This enhances the prospects for detection with future facilities such as the James Webb Space Telescope and large, ground-based telescopes.

Shrinkage of ipsilateral taste buds and hyperplasia of contralateral taste buds following chorda tympani nerve transection

OpenAIRE

Li, Yi-ke; Yang, Juan-mei; Huang, Yi-bo; Ren, Dong-dong; Chi, Fang-lu

2015-01-01

The morphological changes that occur in the taste buds after denervation are not well understood in rats, especially in the contralateral tongue epithelium. In this study, we investigated the time course of morphological changes in the taste buds following unilateral nerve transection. The role of the trigeminal component of the lingual nerve in maintaining the structural integrity of the taste buds was also examined. Twenty-four Sprague-Dawley rats were randomly divided into three groups: co...

Fungiform Taste Bud Degeneration in C57BL/6J Mice Following Chorda-Lingual Nerve Transection

OpenAIRE

Guagliardo, Nick A.; Hill, David L.

2007-01-01

Taste buds are dependent on innervation for normal morphology and function. Fungiform taste bud degeneration after chorda tympani nerve injury has been well documented in rats, hamsters, and gerbils. The current study examines fungiform taste bud distribution and structure in adult C57BL/6J mice from both intact taste systems and after unilateral chorda-lingual nerve transection. Fungiform taste buds were visualized and measured with the aid of cytokeratin 8. In control mice, taste buds were ...

Passive immunization of fetal rats with antiserum to luteinizing hormone-releasing hormone (LHRH) or transection of the central roots of the nervus terminalis does not affect rat pups' preference for home nest.

Science.gov (United States)

Schwanzel-Fukuda, M; Pfaff, D W

1987-01-01

Luteinizing hormone-releasing hormone (LHRH) is found immunocytochemically in cell bodies and fibers of the nervus terminalis, a cranial nerve which courses from the nasal septum through the cribriform plate of the ethmoid bone (medial to the olfactory and vomeronasal nerves) and enters the forebrain, caudal to the olfactory bulbs. Immunoreactive LHRH is first detected in the nervus terminalis of the fetal rat at 15 days of gestation, preceding its detection by immunocytochemistry in any other area of the brain, including the median eminence, and preceding detection of immunoreactive luteinizing hormone (LH) in the anterior pituitary. During development of the rat fetus, the nervus terminalis is the principal source of LHRH in the nervous system from days 15 through 19 of a 21 day gestation period. We tested the notion that the LHRH system of the nervus terminalis is important for olfactory performance by examining the effects of administration of antisera to LHRH during fetal development (versus saline controls), or medial olfactory peduncle transections, in the neonatal rat, which would sever the central projections of the nervus terminalis (versus lateral peduncle transection, complete transection of the olfactory peduncles and the central nervus terminalis or controls) on preferences of rat pups for home nest. The hypothesis that LHRH is important for this chemosensory response was not confirmed. Neither antisera to LHRH nor medical olfactory peduncle transection disrupted preference for home shavings. Only complete olfactory peduncle transection had a significant effect compared to unoperated and sham-operated controls.

Potential of human dental stem cells in repairing the complete transection of rat spinal cord

Science.gov (United States)

Yang, Chao; Li, Xinghan; Sun, Liang; Guo, Weihua; Tian, Weidong

2017-04-01

Objective. The adult spinal cord of mammals contains a certain amount of neural precursor cells, but these endogenous cells have a limited capacity for replacement of lost cells after spinal cord injury. The exogenous stem cells transplantation has become a therapeutic strategy for spinal cord repairing because of their immunomodulatory and differentiation capacity. In addition, dental stem cells originating from the cranial neural crest might be candidate cell sources for neural engineering. Approach. Human dental follicle stem cells (DFSCs), stem cells from apical papilla (SCAPs) and dental pulp stem cells (DPSCs) were isolated and identified in vitro, then green GFP-labeled stem cells with pellets were transplanted into completely transected spinal cord. The functional recovery of rats and multiple neuro-regenerative mechanisms were explored. Main results. The dental stem cells, especially DFSCs, demonstrated the potential in repairing the completely transected spinal cord and promote functional recovery after injury. The major involved mechanisms were speculated below: First, dental stem cells inhibited the expression of interleukin-1β to reduce the inflammatory response; second, they inhibited the expression of ras homolog gene family member A (RhoA) to promote neurite regeneration; third, they inhibited the sulfonylurea receptor1 (SUR-1) expression to reduce progressive hemorrhagic necrosis; lastly, parts of the transplanted cells survived and differentiated into mature neurons and oligodendrocytes but not astrocyte, which is beneficial for promoting axons growth. Significance. Dental stem cells presented remarkable tissue regenerative capability after spinal cord injury through immunomodulatory, differentiation and protection capacity.

Integration of donor mesenchymal stem cell-derived neuron-like cells into host neural network after rat spinal cord transection.

Science.gov (United States)

Zeng, Xiang; Qiu, Xue-Cheng; Ma, Yuan-Huan; Duan, Jing-Jing; Chen, Yuan-Feng; Gu, Huai-Yu; Wang, Jun-Mei; Ling, Eng-Ang; Wu, Jin-Lang; Wu, Wutian; Zeng, Yuan-Shan

2015-06-01

Functional deficits following spinal cord injury (SCI) primarily attribute to loss of neural connectivity. We therefore tested if novel tissue engineering approaches could enable neural network repair that facilitates functional recovery after spinal cord transection (SCT). Rat bone marrow-derived mesenchymal stem cells (MSCs), genetically engineered to overexpress TrkC, receptor of neurotrophin-3 (NT-3), were pre-differentiated into cells carrying neuronal features via co-culture with NT-3 overproducing Schwann cells in 3-dimensional gelatin sponge (GS) scaffold for 14 days in vitro. Intra-GS formation of MSC assemblies emulating neural network (MSC-GS) were verified morphologically via electron microscopy (EM) and functionally by whole-cell patch clamp recording of spontaneous post-synaptic currents. The differentiated MSCs still partially maintained prototypic property with the expression of some mesodermal cytokines. MSC-GS or GS was then grafted acutely into a 2 mm-wide transection gap in the T9-T10 spinal cord segments of adult rats. Eight weeks later, hindlimb function of the MSC-GS-treated SCT rats was significantly improved relative to controls receiving the GS or lesion only as indicated by BBB score. The MSC-GS transplantation also significantly recovered cortical motor evoked potential (CMEP). Histologically, MSC-derived neuron-like cells maintained their synapse-like structures in vivo; they additionally formed similar connections with host neurites (i.e., mostly serotonergic fibers plus a few corticospinal axons; validated by double-labeled immuno-EM). Moreover, motor cortex electrical stimulation triggered c-fos expression in the grafted and lumbar spinal cord cells of the treated rats only. Our data suggest that MSC-derived neuron-like cells resulting from NT-3-TrkC-induced differentiation can partially integrate into transected spinal cord and this strategy should be further investigated for reconstructing disrupted neural circuits. Copyright �

Species composition, distribution and abundance of chaetodontidae along reef transects in the Flores Sea

Science.gov (United States)

Adrim, Mohammad; Hutomo, Malikusworo

Observations on chaetodontid fishes were made by applying a visual census technique at 13 coral reef locations in the Flores Sea region in October and November 1984. These observations were made along 50 m transect lines, parallel to the shore or the reef edge at depths between 3 to 12 m. Twenty-three species of Chaetodontidae were observed, representing three genera: Chaetodon (20 species), Heniochus (2 species) and Forcipiger (1 species). Chaetodon kleini, C. trifasciatus, C. melannotus and C. baronessa proved to be the most abundant species, and among them C. kleini and C. trifasciatus were the most widely distributed ones. Chaetodon semeion and C. mertensi were the rarest species. The greatest number of individuals (77) was counted at station 4.268 near Tanjung Burung, Sumbawa, while the greatest number of species (14) was observed at station 4.257, north of Komodo. The lowest number of individuals (17) was counted at station 4.175 near P. Bahuluang, Salayer, while station 4.251 near Teluk Slawi, Komodo, was inhabited by the smallest numbver of species (2). Numerical classification by using the Bray Curtis dissimilarity index resulted in three groups of entities. The first group was characterized by predomination of C. kleini and the second by predomination of C. melannotus. The third one was a loose group not characterized by any predominant species. The analyses indicated that the similarities of the chaetodontid communities between locations are not related to the distance between them, but rather to habitat conditions. For example predomination of C. melannotus is strongly related to the predomination of soft coral. Compared to other areas of Indonesia, e.g. Bali, Seribu Islands, Batam, Sunda Strait, and Ambon Bay, the Flores Sea reefs have a more abundant and more diverse chaetodontid fauna.

The Atlantic Meridional Transect: Spatially Extensive Calibration and Validation of Optical Properties and Remotely Sensed Measurements of Ocean Colour

Science.gov (United States)

Aiken, James; Hooker, Stanford

1997-01-01

Twice a year, the Royal Research Ship (RRS) James Clark Ross (JCR) steams a meridional transect of the atlantic Ocean between Grimsly (UK) and Stanley (Falkland Islands) with a port call in Montevideo (Uruguay), as part of the annual research activities of the British Antarctic Survey (BAS). In September, the JCR sails from the UK, and the following April it makes the return trip. The ship is operated by the BAS for the Natural Environment Research Council (NERC). The Atlantic Meridional Transect (AMT) Program exploits the passage of the JCR from approximately 50 deg. N to 50 deg. S with a primary objective to investigate physical and biological processes, as well as to measure the mesi-to-basin-scale bio-optical properties of the atlantic Ocean. The calibration and validation of remotely sensed observations of ocean colour is an inherent objective of these studies: first, by relating in situ measurements of water leaving radiance to satellite measurement, and second, by measuring the bio-optically active constituents of the water.

On-line sample processing methods in flow analysis

DEFF Research Database (Denmark)

Miró, Manuel; Hansen, Elo Harald

2008-01-01

In this chapter, the state of the art of flow injection and related approaches thereof for automation and miniaturization of sample processing regardless of the aggregate state of the sample medium is overviewed. The potential of the various generation of flow injection for implementation of in...

BROAD ABSORPTION LINE VARIABILITY ON MULTI-YEAR TIMESCALES IN A LARGE QUASAR SAMPLE

Energy Technology Data Exchange (ETDEWEB)

Filiz Ak, N.; Brandt, W. N.; Schneider, D. P. [Department of Astronomy and Astrophysics, Pennsylvania State University, University Park, PA 16802 (United States); Hall, P. B. [Department of Physics and Astronomy, York University, 4700 Keele St., Toronto, Ontario, M3J 1P3 (Canada); Anderson, S. F. [Astronomy Department, University of Washington, Seattle, WA 98195 (United States); Hamann, F. [Department of Astronomy, University of Florida, Gainesville, FL 32611-2055 (United States); Lundgren, B. F. [Department of Astronomy, University of Wisconsin, Madison, WI 53706 (United States); Myers, Adam D. [Department of Physics and Astronomy, University of Wyoming, Laramie, WY 82071 (United States); Pâris, I. [Departamento de Astronomía, Universidad de Chile, Casilla 36-D, Santiago (Chile); Petitjean, P. [Universite Paris 6, Institut d' Astrophysique de Paris, 75014, Paris (France); Ross, Nicholas P. [Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Berkeley, CA 92420 (United States); Shen, Yue [Harvard-Smithsonian Center for Astrophysics, 60 Garden St., MS-51, Cambridge, MA 02138 (United States); York, Don, E-mail: nfilizak@astro.psu.edu [The University of Chicago, Department of Astronomy and Astrophysics, Chicago, IL 60637 (United States)

2013-11-10

We present a detailed investigation of the variability of 428 C IV and 235 Si IV broad absorption line (BAL) troughs identified in multi-epoch observations of 291 quasars by the Sloan Digital Sky Survey-I/II/III. These observations primarily sample rest-frame timescales of 1-3.7 yr over which significant rearrangement of the BAL wind is expected. We derive a number of observational results on, e.g., the frequency of BAL variability, the velocity range over which BAL variability occurs, the primary observed form of BAL-trough variability, the dependence of BAL variability upon timescale, the frequency of BAL strengthening versus weakening, correlations between BAL variability and BAL-trough profiles, relations between C IV and Si IV BAL variability, coordinated multi-trough variability, and BAL variations as a function of quasar properties. We assess implications of these observational results for quasar winds. Our results support models where most BAL absorption is formed within an order-of-magnitude of the wind-launching radius, although a significant minority of BAL troughs may arise on larger scales. We estimate an average lifetime for a BAL trough along our line-of-sight of a few thousand years. BAL disappearance and emergence events appear to be extremes of general BAL variability, rather than being qualitatively distinct phenomena. We derive the parameters of a random-walk model for BAL EW variability, finding that this model can acceptably describe some key aspects of EW variability. The coordinated trough variability of BAL quasars with multiple troughs suggests that changes in 'shielding gas' may play a significant role in driving general BAL variability.

Delayed Presentation of Isolated Complete Pancreatic Transection as a Result of Sport-Related Blunt Trauma to the Abdomen

Directory of Open Access Journals (Sweden)

Andrew J. Healey

2008-01-01

Full Text Available Introduction: Blunt abdominal trauma is a rare but well-recognized cause of pancreatic transection. A delayed presentation of pancreatic fracture following sport-related blunt trauma with the coexisting diagnostic pitfalls is presented. Case Report: A 17-year-old rugby player was referred to our specialist unit after having been diagnosed with traumatic pancreatic transection, having presented 24 h after a sporting injury. Despite haemodynamic stability, at laparotomy he was found to have a diffuse mesenteric hematoma involving the large and small bowel mesentery, extending down to the sigmoid colon from the splenic flexure, and a large retroperitoneal hematoma arising from the pancreas. The pancreas was completely severed with the superior border of the distal segment remaining attached to the splenic vein that was intact. A distal pancreatectomy with spleen preservation and evacuation of the retroperitoneal hematoma was performed. Discussion/Conclusion: Blunt pancreatic trauma is a serious condition. Diagnosis and treatment may often be delayed, which in turn may drastically increase morbidity and mortality. Diagnostic difficulties apply to both paraclinical and radiological diagnostic methods. A high index of suspicion should be maintained in such cases, with a multi-modality diagnostic approach and prompt surgical intervention as required.

Improved healing of transected rabbit Achilles tendon after a single injection of cartilage-derived morphogenetic protein-2.

Science.gov (United States)

Forslund, Carina; Aspenberg, Per

2003-01-01

Achilles tendon ruptures in humans might be treated more efficiently with the help of a growth factor. Cartilage-derived morphogenetic protein-2 has been shown to induce formation of tendon-like tissue. Cartilage-derived morphogenetic protein-2 has a positive effect on mechanical parameters for tendon healing in a rabbit model with Achilles tendon transection. Controlled laboratory study. The right Achilles tendon of 40 rabbits was transected without tendon suture. Cartilage-derived morphogenetic protein-2 (10 micro g) or vehicle control (acetate buffer) was injected locally 2 hours postoperatively. All tendons were tested biomechanically at 8 and 14 days, and treated tendons were histologically and radiographically evaluated at 56 days. At 14 days, both failure load and stiffness of treated tendons were increased by 35%. The treated tendons had significantly larger callus size at 8 and 14 days. Histologic and radiographic examination showed no signs of ossification in the treated tendons after 56 days. A single injection of cartilage-derived morphogenetic protein-2 led to a stronger and stiffer tendon callus than that in the controls without inducing bone formation. Similar results from a larger animal model would suggest a possible future use of cartilage-derived morphogenetic protein-2 in the treatment of human Achilles tendon ruptures.

Spinal cord transection-induced allodynia in rats--behavioral, physiopathological and pharmacological characterization.

Directory of Open Access Journals (Sweden)

Saïd M'Dahoma

Full Text Available In humans, spinal cord lesions induce not only major motor and neurovegetative deficits but also severe neuropathic pain which is mostly resistant to classical analgesics. Better treatments can be expected from precise characterization of underlying physiopathological mechanisms. This led us to thoroughly investigate (i mechanical and thermal sensory alterations, (ii responses to acute treatments with drugs having patent or potential anti-allodynic properties and (iii the spinal/ganglion expression of transcripts encoding markers of neuronal injury, microglia and astrocyte activation in rats that underwent complete spinal cord transection (SCT. SCT was performed at thoracic T8-T9 level under deep isoflurane anaesthesia, and SCT rats were examined for up to two months post surgery. SCT induced a marked hyper-reflexia at hindpaws and strong mechanical and cold allodynia in a limited (6 cm2 cutaneous territory just rostral to the lesion site. At this level, pressure threshold value to trigger nocifensive reactions to locally applied von Frey filaments was 100-fold lower in SCT- versus sham-operated rats. A marked up-regulation of mRNAs encoding ATF3 (neuronal injury and glial activation markers (OX-42, GFAP, P2×4, P2×7, TLR4 was observed in spinal cord and/or dorsal root ganglia at T6-T11 levels from day 2 up to day 60 post surgery. Transcripts encoding the proinflammatory cytokines IL-1β, IL-6 and TNF-α were also markedly but differentially up-regulated at T6-T11 levels in SCT rats. Acute treatment with ketamine (50 mg/kg i.p., morphine (3-10 mg/kg s.c. and tapentadol (10-20 mg/kg i.p. significantly increased pressure threshold to trigger nocifensive reaction in the von Frey filaments test, whereas amitriptyline, pregabalin, gabapentin and clonazepam were ineffective. Because all SCT rats developed long lasting, reproducible and stable allodynia, which could be alleviated by drugs effective in humans, thoracic cord transection might be a

Sampling strategies for tropical forest nutrient cycling studies: a case study in São Paulo, Brazil

Directory of Open Access Journals (Sweden)

G. Sparovek

1997-12-01

Full Text Available The precise sampling of soil, biological or micro climatic attributes in tropical forests, which are characterized by a high diversity of species and complex spatial variability, is a difficult task. We found few basic studies to guide sampling procedures. The objective of this study was to define a sampling strategy and data analysis for some parameters frequently used in nutrient cycling studies, i. e., litter amount, total nutrient amounts in litter and its composition (Ca, Mg, Κ, Ν and P, and soil attributes at three depths (organic matter, Ρ content, cation exchange capacity and base saturation. A natural remnant forest in the West of São Paulo State (Brazil was selected as study area and samples were collected in July, 1989. The total amount of litter and its total nutrient amounts had a high spatial independent variance. Conversely, the variance of litter composition was lower and the spatial dependency was peculiar to each nutrient. The sampling strategy for the estimation of litter amounts and the amount of nutrient in litter should be different than the sampling strategy for nutrient composition. For the estimation of litter amounts and the amount of nutrients in litter (related to quantity a large number of randomly distributed determinations are needed. Otherwise, for the estimation of litter nutrient composition (related to quality a smaller amount of spatially located samples should be analyzed. The determination of sampling for soil attributes differed according to the depth. Overall, surface samples (0-5 cm showed high short distance spatial dependent variance, whereas, subsurface samples exhibited spatial dependency in longer distances. Short transects with sampling interval of 5-10 m are recommended for surface sampling. Subsurface samples must also be spatially located, but with transects or grids with longer distances between sampling points over the entire area. Composite soil samples would not provide a complete

A Summary of Results From the IPOD Transects Across the Japan, Mariana, and Middle-America Convergent Margins

OpenAIRE

Von Huene, R; Uyeda, S

1981-01-01

Investigations of convergent margins along the IPOD transects support the concept of ocean floor spreading in back-arc basins and the concept of tectonically accreted sediment at the front of convergent margins. However, not all convergent margins have large accreted complexes, and other less frequently used concepts are required in the interpretations of these convergent margins. If the present rates of plate convergence are accepted, then much sediment that entered the trenches studied is p...

Hawaii Coral Reef Assessment and Monitoring Program (CRAMP): digital still images from transects on Maui, Molokai, and Kauai, 2007 (NODC Accession 0056791)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — This dataset consists of digital still transect images (JPG files) from CRAMP surveys taken in 2007 from 9 sites on Maui, 3 sites on Molokai, and 1 site on Kauai....

BOOSTING LY α   AND He ii λ 1640 LINE FLUXES FROM POPULATION III GALAXIES: STOCHASTIC IMF SAMPLING AND DEPARTURES FROM CASE-B

International Nuclear Information System (INIS)

Mas-Ribas, Lluís; Dijkstra, Mark; Forero-Romero, Jaime E.

2016-01-01

We revisit calculations of nebular hydrogen Ly α and He ii λ 1640 line strengths for Population III (Pop III) galaxies, undergoing continuous, and bursts of, star formation. We focus on initial mass functions (IMFs) motivated by recent theoretical studies, which generally span a lower range of stellar masses than earlier works. We also account for case-B departures and the stochastic sampling of the IMF. In agreement with previous work, we find that departures from case-B can enhance the Ly α flux by a factor of a few, but we argue that this enhancement is driven mainly by collisional excitation and ionization, and not due to photoionization from the n  = 2 state of atomic hydrogen. The increased sensitivity of the Ly α flux to the high-energy end of the galaxy spectrum makes it more subject to stochastic sampling of the IMF. The latter introduces a dispersion in the predicted nebular line fluxes around the deterministic value by as much as a factor of ∼4. In contrast, the stochastic sampling of the IMF has less impact on the emerging Lyman Werner photon flux. When case-B departures and stochasticity effects are combined, nebular line emission from Pop III galaxies can be up to one order of magnitude brighter than predicted by “standard” calculations that do not include these effects. This enhances the prospects for detection with future facilities such as the James Webb Space Telescope and large, ground-based telescopes.

Automation and integration of multiplexed on-line sample preparation with capillary electrophoresis for DNA sequencing

Energy Technology Data Exchange (ETDEWEB)

Tan, H.

1999-03-31

The purpose of this research is to develop a multiplexed sample processing system in conjunction with multiplexed capillary electrophoresis for high-throughput DNA sequencing. The concept from DNA template to called bases was first demonstrated with a manually operated single capillary system. Later, an automated microfluidic system with 8 channels based on the same principle was successfully constructed. The instrument automatically processes 8 templates through reaction, purification, denaturation, pre-concentration, injection, separation and detection in a parallel fashion. A multiplexed freeze/thaw switching principle and a distribution network were implemented to manage flow direction and sample transportation. Dye-labeled terminator cycle-sequencing reactions are performed in an 8-capillary array in a hot air thermal cycler. Subsequently, the sequencing ladders are directly loaded into a corresponding size-exclusion chromatographic column operated at {approximately} 60 C for purification. On-line denaturation and stacking injection for capillary electrophoresis is simultaneously accomplished at a cross assembly set at {approximately} 70 C. Not only the separation capillary array but also the reaction capillary array and purification columns can be regenerated after every run. DNA sequencing data from this system allow base calling up to 460 bases with accuracy of 98%.

Determination of total and inorganic mercury in fish samples with on-line oxidation coupled to atomic fluorescence spectrometry

International Nuclear Information System (INIS)

Shao Lijun; Gan Wuer; Su Qingde

2006-01-01

An atomic fluorescence spectrometry system for determination of total and inorganic mercury with electromagnetic induction-assisted heating on-line oxidation has been developed. Potassium peroxodisulphate was used as the oxidizing agent to decompose organomercury compounds. Depending on the temperature selected, inorganic or total mercury could be determined with the same manifold. Special accent was put on the study of the parameters influencing the on-line digestion efficiency. The tolerance to the interference of coexisting ions was carefully examined in this system. Under optimal conditions, the detection limits (3σ) were evaluated to be 2.9 ng l -1 for inorganic mercury and 2.6 ng l -1 for total mercury, respectively. The relative standard deviations for 10 replicate determinations of 1.0 μg l -1 Hg were 2.4 and 3.2% for inorganic mercury and total mercury, respectively. The proposed method was successfully applied to the determination of total and inorganic mercury in fish samples

Fisheries Biology and Stock Assessment Division (FBSAD) Recruit and Predator Reef Fish Belt Transect and Habitat Quadrat Surveys at Hawaii Island (Big Island), Main Hawaiian Islands, 2008; and Midway Atoll, Northwestern Hawaiian Islands (NWHI), 2008 (NODC Accession 0067519)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Shore-based belt transects were conducted and habitat quadrats were surveyed using transects at 1 to ~ 5 m depths at a total four (4) sites: at (1-2) 2 longshore...

Small population size of Pribilof Rock Sandpipers confirmed through distance-sampling surveys in Alaska

Science.gov (United States)

Ruthrauff, Daniel R.; Tibbitts, T. Lee; Gill, Robert E.; Dementyev, Maksim N.; Handel, Colleen M.

2012-01-01

The Rock Sandpiper (Calidris ptilocnemis) is endemic to the Bering Sea region and unique among shorebirds in the North Pacific for wintering at high latitudes. The nominate subspecies, the Pribilof Rock Sandpiper (C. p. ptilocnemis), breeds on four isolated islands in the Bering Sea and appears to spend the winter primarily in Cook Inlet, Alaska. We used a stratified systematic sampling design and line-transect method to survey the entire breeding range of this population during springs 2001-2003. Densities were up to four times higher on the uninhabited and more northerly St. Matthew and Hall islands than on St. Paul and St. George islands, which both have small human settlements and introduced reindeer herds. Differences in density, however, appeared to be more related to differences in vegetation than to anthropogenic factors, raising some concern for prospective effects of climate change. We estimated the total population at 19 832 birds (95% CI 17 853–21 930), ranking it among the smallest of North American shorebird populations. To determine the vulnerability of C. p. ptilocnemis to anthropogenic and stochastic environmental threats, future studies should focus on determining the amount of gene flow among island subpopulations, the full extent of the subspecies' winter range, and the current trajectory of this small population.

Outcome of prolonged acute vena cava occlusion after iatrogenic transection and repair in a dog.

Science.gov (United States)

Halwagi, Marie-Chantal; Crawford, Evan; Hoddinott, Katie; Oblak, Michelle L

2017-08-01

A 12-year-old castrated male Airedale terrier dog was diagnosed with a hepatocellular carcinoma in the right medial liver lobe. During tumor resection, inadvertent stapling and transection of the caudal vena cava occurred. Complete caval occlusion was required for 18 minutes and primary anastomosis was completed. The dog received 2 blood transfusions and developed mild pelvic limb edema after surgery. Computed tomography evaluation 9 months after surgery showed collateral circulation and suspected stricture of the vena cava with an absence of clinical effect. The dog remained alive and asymptomatic more than 1 year after surgery.

Solid-phase extraction of polar pesticides from environmental water samples on graphitized carbon and Empore-activated carbon disks and on-line coupling to octadecyl-bonded silica analytical columns.

Science.gov (United States)

Slobodník, J; Oztezkizan, O; Lingeman, H; Brinkman, U A

1996-10-25

The suitability of Empore-activated carbon disks (EACD), Envi-Carb graphitized carbon black (GCB) and CPP-50 graphitized carbon for the trace enrichment of polar pesticides from water samples was studied by means of off-line and on-line solid-phase extraction (SPE). In the off-line procedure, 0.5-2 l samples spiked with a test mixture of oxamyl, methomyl and aldicarb sulfoxide were enriched on EnviCarb SPE cartridges or 47 mm diameter EACD and eluted with dichloromethane-methanol. After evaporation, a sample was injected onto a C18-bonded silica column and analysed by liquid chromatography with ultraviolet (LC-UV) detection. EACD performed better than EnviCarb cartridges in terms of breakthrough volumes (> 2 l for all test analytes), reproducibility (R.S.D. of recoveries, 4-8%, n = 3) and sampling speed (100 ml/min); detection limits in drinking water were 0.05-0.16 microgram/l. In the on-line experiments, 4.6 mm diameter pieces cut from original EACD and stacked onto each other in a 9 mm long precolumn, and EnviCarb and CPP-50 packed in 10 x 2.0 mm I.D. precolumn, were tested, and 50-200 ml spiked water samples were preconcentrated. Because of the peak broadening caused by the strong sorption of the analytes on carbon, the carbon-packed precolumns were eluted by a separate stream of 0.1 ml/min acetonitrile which was mixed with the gradient LC eluent in front of the C18 analytical column. The final on-line procedure was also applied for the less polar propoxur, carbaryl and methiocarb. EnviCarb could not be used due to its poor pressure resistance. CPP-50 provided less peak broadening than EACD: peak widths were 0.1-0.3 min and R.S.D. of peak heights 4-14% (n = 3). In terms of analyte trapping efficiency on-line SPE-LC-UV with a CPP-50 precolumn also showed better performance than when Bondesil C18/OH or polymeric PLRP-S was used, but chromatographic resolution was similar. With the CPP-50-based system, detection limits of the test compounds were 0.05-1 microgram

Variation in ultrafiltered and LMW organic matter fluorescence properties under simulated estuarine mixing transects: 1. Mixing alone

Science.gov (United States)

Boyd, Thomas J.; Barham, Bethany P.; Hall, Gregory J.; Osburn, Christopher L.

2010-09-01

Ultrafiltered and low molecular weight dissolved organic matter (UDOM and LMW-DOM, respectively) fluorescence was studied under simulated estuarine mixing using samples collected from Delaware, Chesapeake, and San Francisco Bays (USA) transects. UDOM was concentrated by tangential flow ultrafiltration (TFF) from the marine (>33 PSU), mid-estuarine (˜16 PSU), and freshwater (ocean members. LMW fluorescence components fit a decreasing linear mixing model from mid salinities to the ocean end-member, but were more highly fluorescent than mixing alone would predict in lower salinities (shifts were also seen in UDOM peak emission wavelengths with blue-shifting toward the ocean end-member. Humic-type components in UDOM generally showed lower fluorescent intensities at low salinities, higher at mid-salinities, and lower again toward the ocean end-member. T (believed to be proteinaceous) and N (labile organic matter) peaks behaved similarly to each other, but not to B peak fluorescence, which showed virtually no variation in permeate or UDOM mixes with salinity. PCA and PARAFAC models showed similar results suggesting trends could be modeled for DOM end- and mid-member sources. Changes in fluorescence properties due to estuarine mixing may be important when using CDOM as a proxy for DOM cycling in coastal systems.

Results from an onshore/offshore seismic transect of southern Taiwan

Science.gov (United States)

McIntosh, K. D.; van Avendonk, H. J.; Wu, F. T.; Okaya, D. A.; Wang, C.

2010-12-01

The TAIGER project is a large research program focused on the processes and dynamics of arc-continent collision. As part of the project we recorded marine and onshore-offshore seismic data in summer 2009 using the R/V Langseth, ocean bottom seismometers (OBS) from the U.S. OBS instrument pool and from National Taiwan Ocean University, and land instruments from PASSCAL and Taiwan. Because the region from north of Luzon to northern Taiwan encompasses a multiphase transition from oceanic subduction to arc-continent collision, the TAIGER data sets along with state of the art geodynamic modeling are starting to provide fundamental insights into this complex process. This presentation focuses on initial results of an onshore/offshore seismic transect across southern Taiwan. One of the keys to success in studying the arc-continent collision in Taiwan is to document the crustal structure in the developing collision zone of southern Taiwan. This is where we hope to be able to view the transition from what looks like subduction to the south, to the more complex collision zone to the north. In this area we acquired an ~east-west seismic transect using 4 OBSs west of Taiwan, 40 portable land seismometers crossing the island from near Kaohsiung (W) to near Taitung (E) , and 14 OBSs east of Taiwan. As expected, data quality is extremely variable due to local geology at each station and, for land instruments, the level of cultural noise near each station. In fact, some of the land stations show no usable signals from seismic source pulses either east or west of Taiwan. However, other more fortuitously located instrument show clear arrivals at offsets of up to 280 km. As expected, all the best stations are located in mountainous areas where there is a minimum of unconsolidated material and less cultural noise. The land station data include primarily Pg and Pn arrivals, while the OBS data include a full range of reflected and refracted arrivals. The marine wide-angle data will also

Valproic Acid Promotes Survival of Facial Motor Neurons in Adult Rats After Facial Nerve Transection: a Pilot Study.

Science.gov (United States)

Zhang, Lili; Fan, Zhaomin; Han, Yuechen; Xu, Lei; Liu, Wenwen; Bai, Xiaohui; Zhou, Meijuan; Li, Jianfeng; Wang, Haibo

2018-04-01

Valproic acid (VPA), a medication primarily used to treat epilepsy and bipolar disorder, has been applied to the repair of central and peripheral nervous system injury. The present study investigated the effect of VPA on functional recovery, survival of facial motor neurons (FMNs), and expression of proteins in rats after facial nerve trunk transection by functional measurement, Nissl staining, TUNEL, immunofluorescence, and Western blot. Following facial nerve injury, all rats in group VPA showed a better functional recovery, which was significant at the given time, compared with group NS. The Nissl staining results demonstrated that the number of FMNs survival in group VPA was higher than that in group normal saline (NS). TUNEL staining showed that axonal injury of facial nerve could lead to neuronal apoptosis of FMNs. But treatment of VPA significantly reduced cell apoptosis by decreasing the expression of Bax protein and increased neuronal survival by upregulating the level of brain-derived neurotrophic factor (BDNF) and growth associated protein-43 (GAP-43) expression in injured FMNs compared with group NS. Overall, our findings suggest that VPA may advance functional recovery, reduce lesion-induced apoptosis, and promote neuron survival after facial nerve transection in rats. This study provides an experimental evidence for better understanding the mechanism of injury and repair of peripheral facial paralysis.

Derivative spectrum chromatographic method for the determination of trimethoprim in honey samples using an on-line solid-phase extraction technique.

Science.gov (United States)

Uchiyama, Kazuhisa; Kondo, Mari; Yokochi, Rika; Takeuchi, Yuri; Yamamoto, Atsushi; Inoue, Yoshinori

2011-07-01

A simple, selective and rapid analytical method for determination of trimethoprim (TMP) in honey samples was developed and validated. This method is based on a SPE technique followed by HPLC with photodiode array detection. After dilution and filtration, aliquots of 500 μL honey samples were directly injected to an on-line SPE HPLC system. TMP was extracted on an RP SPE column, and separated on a hydrophilic interaction chromatography column during HPLC analysis. At the first detection step, the noise level of the photodiode array data was reduced with two-dimensional equalizer filtering, and then the smoothed data were subjected to derivative spectrum chromatography. On the second-derivative chromatogram at 254 nm, the limit of detection and the limit of quantification of TMP in a honey sample were 5 and 10 ng/g, respectively. The proposed method showed high accuracy (60-103%) with adequate sensitivity for TMP monitoring in honey samples. Copyright © 2011 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

MICROLENSING OF QUASAR BROAD EMISSION LINES: CONSTRAINTS ON BROAD LINE REGION SIZE

Energy Technology Data Exchange (ETDEWEB)

Guerras, E.; Mediavilla, E. [Instituto de Astrofisica de Canarias, Via Lactea S/N, La Laguna E-38200, Tenerife (Spain); Jimenez-Vicente, J. [Departamento de Fisica Teorica y del Cosmos, Universidad de Granada, Campus de Fuentenueva, E-18071 Granada (Spain); Kochanek, C. S. [Department of Astronomy and the Center for Cosmology and Astroparticle Physics, The Ohio State University, 4055 McPherson Lab, 140 West 18th Avenue, Columbus, OH 43221 (United States); Munoz, J. A. [Departamento de Astronomia y Astrofisica, Universidad de Valencia, E-46100 Burjassot, Valencia (Spain); Falco, E. [Center for Astrophysics, 60 Garden Street, Cambridge, MA 02138 (United States); Motta, V. [Departamento de Fisica y Astronomia, Universidad de Valparaiso, Avda. Gran Bretana 1111, Valparaiso (Chile)

2013-02-20

We measure the differential microlensing of the broad emission lines between 18 quasar image pairs in 16 gravitational lenses. We find that the broad emission lines are in general weakly microlensed. The results show, at a modest level of confidence (1.8{sigma}), that high ionization lines such as C IV are more strongly microlensed than low ionization lines such as H{beta}, indicating that the high ionization line emission regions are more compact. If we statistically model the distribution of microlensing magnifications, we obtain estimates for the broad line region size of r{sub s} = 24{sup +22} {sub -15} and r{sub s} = 55{sup +150} {sub -35} lt-day (90% confidence) for the high and low ionization lines, respectively. When the samples are divided into higher and lower luminosity quasars, we find that the line emission regions of more luminous quasars are larger, with a slope consistent with the expected scaling from photoionization models. Our estimates also agree well with the results from local reveberation mapping studies.

NOAA Polyline Shapefile - ROV transect points, US Caribbean - North East Reserve, Puerto Rico - M-I907-NF-12 (2012), UTM 20N NAD83

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — This shapefile denotes the transect points of the underwater video and photos that were collected by NOAA scientists using a Spectrum Phantom S2 ROV (remotely...

NOAA Polyline Shapefile - ROV transect Points, US Caribbean - North East Reserve, Puerto Rico - M-I907-NF-13 (2013), UTM 20N NAD83

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — This shapefile denotes the transect points of the underwater video and photos that were collected by NOAA scientists using a Spectrum Phantom S2 ROV (remotely...

Traffic-related distribution of antimony in roadside soils.

Science.gov (United States)

Földi, Corinna; Sauermann, Simon; Dohrmann, Reiner; Mansfeldt, Tim

2018-06-01

Vehicular emissions have become one of the main source of pollution of urban soils; this highlights the need for more detailed research on various traffic-related emissions and related distribution patterns. Since the banning of asbestos in the European Union, its substitution with antimony (Sb) in brake linings has led to increased inputs of this toxic metalloid to environmental compartments. The objective of this study was to provide detailed information about the spatial distribution patterns of Sb and to assess its mobility and bioavailability. Roadside soils along an arterial road (approx. 9000 vehicles per day) in Cologne (Germany) were studied along five transects, at four soil depths and at seven sampling points set at varying distances from the road (n = 140). For all samples, comprehensive soil characterization was performed and inverse aqua regia-extractable trace metal content was determined being pseudo-total contents. Furthermore, for one transect, also total Sb and a chemical sequential extraction procedure was applied (n = 28). Pseudo-total Sb for all transects decreased significantly with soil depth and distance from the road, reflecting a distribution pattern similar to that of other trace metals associated with brake lining emissions. Conversely, metals associated with exhaust emissions showed a convex distribution. The geochemical fractionation of Sb revealed the following trends: i) non-specifically sorbed Sb was <5%; ii) specifically sorbed Sb was only detected within 1 m distance from the road and decreased with depth; iii) Sb associated with poorly-crystalline Fe oxides decreased with distance from the road; and iv) content of Sb bounded to well-crystalline Fe oxides, and Sb present in the residual fraction remained relatively constant at each depth. Consequently, roadside soils appear to inhibit brake lining-related Sb contamination, with significant but rather low ecotoxicological potential for input into surface and groundwater

CRED REA Coral Population Parameters at Howland, Phoenix Islands, Pacific Remote Island Areas in 2008

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Belt transects along 2 consecutively-placed, 25m transect lines were surveyed as part of Rapid Ecological Assessments conducted at 4 sites at Howland, Phoenix...

Carbon isotopes of C3 herbs correlate with temperature on removing the influence of precipitation across a temperature transect in the agro-pastoral ecotone of northern China.

Science.gov (United States)

Liu, Xian-Zhao; Zhang, Yong; Li, Zhen-Guo; Feng, Teng; Su, Qing; Song, Yan

2017-12-01

Plant δ 13 C-temperature (δ-T) relation has been established in many systems and is often used as paleotemperature transfer function. However, it is still unclear about the exact contributions of temperature variation to plant 13 C discrimination because of covariation between temperature and precipitation (aridity), which reduces confidence in reconstruction of paleoclimate. In this study, we measured carbon isotope composition (δ 13 C) of 173 samples of C3 perennial herbs from 22 sites across a temperature gradient along the 400 mm isohyet in the farming-pastoral zone of North China. The results showed that precipitation obviously affected the correlations of temperatures and foliar δ 13 C. After removing the influence of precipitation by analysis of covariance (ANCOVA), a more strongly positive relationship was obtained between site-mean foliar δ 13 C and annual mean temperature (AMT), with a regression coefficient of 0.1636‰/°C ( p  =   .0024). For widespread species, Artemisia lavandulaefolia and Artemisia capillaries , the slopes (or coefficients) of foliar δ 13 C and AMT were significantly steeper (larger) than those of foliar δ 13 C and AMT where the precipitation influence was not excluded, whereas the δ-T coefficients of Polygonum persicaria and Leymus chinensis showed little change across the transect after deducting the precipitation effect. Moreover, the positive relationship between temperature and δ 13 C over the transect could be explained by soil moisture availability related to temperature. Our results may afford new opportunities for investigating the nature of past climate variability.

Applying a Modified Triad Approach to Investigate Wastewater lines

International Nuclear Information System (INIS)

Pawlowicz, R.; Urizar, L.; Blanchard, S.; Jacobsen, K.; Scholfield, J.

2006-01-01

Approximately 20 miles of wastewater lines are below grade at an active military Base. This piping network feeds or fed domestic or industrial wastewater treatment plants on the Base. Past wastewater line investigations indicated potential contaminant releases to soil and groundwater. Further environmental assessment was recommended to characterize the lines because of possible releases. A Remedial Investigation (RI) using random sampling or use of sampling points spaced at predetermined distances along the entire length of the wastewater lines, however, would be inefficient and cost prohibitive. To accomplish RI goals efficiently and within budget, a modified Triad approach was used to design a defensible sampling and analysis plan and perform the investigation. The RI task was successfully executed and resulted in a reduced fieldwork schedule, and sampling and analytical costs. Results indicated that no major releases occurred at the biased sampling points. It was reasonably extrapolated that since releases did not occur at the most likely locations, then the entire length of a particular wastewater line segment was unlikely to have contaminated soil or groundwater and was recommended for no further action. A determination of no further action was recommended for the majority of the waste lines after completing the investigation. The modified Triad approach was successful and a similar approach could be applied to investigate wastewater lines on other United States Department of Defense or Department of Energy facilities. (authors)

On-line Automated Sample Preparation-Capillary Gas Chromatography for the Analysis of Plasma Samples.

NARCIS (Netherlands)

Louter, A.J.H.; van der Wagt, R.A.C.A.; Brinkman, U.A.T.

1995-01-01

An automated sample preparation module, (the automated sample preparation with extraction columns, ASPEC), was interfaced with a capillary gas chromatograph (GC) by means of an on-column interface. The system was optimised for the determination of the antidepressant trazodone in plasma. The clean-up

PIXE analysis of U and Pu from hot particles: K-lines vs L-lines

DEFF Research Database (Denmark)

Jiménez-Ramos, M.C.; García López, J.; Eriksson, M.

2012-01-01

. (2007) [1] and Jiménez-Ramos et al. (2010) [2], radioactive particles from aircraft accidents in Palomares and Thule have been characterized. Using micro-Proton Induced X-ray Emission (μ-PIXE) and confocal X-ray fluorescence microprobe (μ-XRF), the L-lines of the main components in these particles, U......-lines present not overlapping between the main peaks in the spectra and the X-ray absorption in the sample is much lower than for L-lines....

CRED REA Coral Population Parameters at French Frigate Shoals, Northwestern Hawaiiian Islands, 2003

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Belt transects along 2 consecutively-placed, 25m transect lines were surveyed as part of Rapid Ecological Assessments conducted at 12 sites at French Frigate Shoals...

CRED REA Coral Population Parameters at French Frigate Shoals, Northwestern Hawaiiian Islands, 2002

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Belt transects along 2 consecutively-placed, 25m transect lines were surveyed as part of Rapid Ecological Assessments conducted at 12 sites at French Frigate Shoals...

CRED REA Coral Population Parameters at Tutuila, American Samoa, 2004

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Belt transects along 2 consecutively-placed, 25m transect lines were surveyed as part of Rapid Ecological Assessments conducted at 22 sites at Tutuila in American...

CRED REA Coral Population Parameters at French Frigate Shoals, Northwestern Hawaiiian Islands, 2004

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Belt transects along 2 consecutively-placed, 25m transect lines were surveyed as part of Rapid Ecological Assessments conducted at 11 sites at French Frigate Shoals...

Validation of a high performance liquid chromatography analysis for the determination of noradrenaline and adrenaline in human urine with an on-line sample purification

DEFF Research Database (Denmark)

Hansen, Åse Marie; Kristiansen, J; Nielsen, J L

1999-01-01

A high performance liquid chromatography (HPLC) method with fluorescence detection including an on-line purification was established for determination of catecholamines in human urine. The method was evaluated using samples of pooled urine spiked with catecholamines and validated for measurements...

Electro-acupuncture promotes survival, differentiation of the bone marrow mesenchymal stem cells as well as functional recovery in the spinal cord-transected rats

Science.gov (United States)

Ding, Ying; Yan, Qing; Ruan, Jing-Wen; Zhang, Yan-Qing; Li, Wen-Jie; Zhang, Yu-Jiao; Li, Yan; Dong, Hongxin; Zeng, Yuan-Shan

2009-01-01

Background Bone marrow mesenchymal stem cells (MSCs) are one of the potential tools for treatment of the spinal cord injury; however, the survival and differentiation of MSCs in an injured spinal cord still need to be improved. In the present study, we investigated whether Governor Vessel electro-acupuncture (EA) could efficiently promote bone marrow mesenchymal stem cells (MSCs) survival and differentiation, axonal regeneration and finally, functional recovery in the transected spinal cord. Results The spinal cords of adult Sprague-Dawley (SD) rats were completely transected at T10, five experimental groups were performed: 1. sham operated control (Sham-control); 2. operated control (Op-control); 3. electro-acupuncture treatment (EA); 4. MSCs transplantation (MSCs); and 5. MSCs transplantation combined with electro-acupuncture (MSCs+EA). After 2-8 weeks of MSCs transplantation plus EA treatment, we found that the neurotrophin-3 (NT-3), cAMP level, the differentiation of MSCs, the 5-HT positive and CGRP positive nerve fibers in the lesion site and nearby tissue of injured spinal cord were significantly increased in the MSCs+EA group as compared to the group of the MSCs transplantation or the EA treated alone. Furthermore, behavioral test and spinal cord evoked potentials detection demonstrated a significantly functional recovery in the MSCs +EA group. Conclusion These results suggest that EA treatment may promote grafted MSCs survival and differentiation; MSCs transplantation combined with EA treatment could promote axonal regeneration and partial locomotor functional recovery in the transected spinal cord in rats and indicate a promising avenue of treatment of spinal cord injury. PMID:19374777

Oxygen isotope records of Globigerina bulloides across a north-south transect in the south-western Indian Ocean

Digital Repository Service at National Institute of Oceanography (India)

Khare, N.; Chaturvedi, S.K.; Saraswat, R

, Washington, D.C). Lutjeharms, J.R.E., N.M. Walters and B.R. Allanson. 1985. Oceanic frontal systems and biologicalenhancement. p.11-21. In: Antarctic Nutrient Cycles and Food Webs. ed. by W.R. Siegfried et al., Springer-Verlag, NewYork. Matsumoto, K., J...: Ocean Sci. J.: 44(2); 2009; 117-123 OXYGEN ISOTOPE RECORDS OF GLOBIGERINA BULLOIDES ACROSS A NORTH-SOUTH TRANSECT IN THE SOUTH-WESTERN INDIAN OCEAN N. Khare 1* , S. K. Chaturvedi 2 and R. Saraswat 3 1. Ministry of Earth Sciences, Block...

CRED REA Coral Population Parameters at Rose Atoll, American Samoa, 2004

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Belt transects along 2 consecutively-placed, 25m transect lines were surveyed as part of Rapid Ecological Assessments conducted at 12 sites at Rose Atoll in American...

CRED REA Coral Population Parameters at Kure Atoll, Northwestern Hawaiiian Islands, 2003

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Belt transects along 2 consecutively-placed, 25m transect lines were surveyed as part of Rapid Ecological Assessments conducted at 9 sites at Kure Atoll in the...

CRED REA Coral Population Parameters at Maro Reef, Northwestern Hawaiiian Islands, 2002

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Belt transects along 2 consecutively-placed, 25m transect lines were surveyed as part of Rapid Ecological Assessments conducted at 5 sites at Maro Reef in the...

CRED REA Coral Population Parameters at Kure Atoll, Northwestern Hawaiiian Islands, 2002

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Belt transects along 2 consecutively-placed, 25m transect lines were surveyed as part of Rapid Ecological Assessments conducted at 9 sites at Kure Atoll in the...

CRED REA Coral Population Parameters at Laysan Island, Northwestern Hawaiiian Islands, 2002

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Belt transects along 2 consecutively-placed, 25m transect lines were surveyed as part of Rapid Ecological Assessments conducted at 3 sites at Laysan Island in the...

CRED REA Coral Population Parameters at Necker Island, Northwestern Hawaiiian Islands, 2002

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Belt transects along 2 consecutively-placed, 25m transect lines were surveyed as part of Rapid Ecological Assessments conducted at 1 site at Necker Island in the...

CRED REA Coral Population Parameters at Midway Atoll, Northwestern Hawaiiian Islands, 2002

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Belt transects along 2 consecutively-placed, 25m transect lines were surveyed as part of Rapid Ecological Assessments conducted at 9 sites at Midway Atoll in the...

CRED REA Coral Population Parameters at Rota, Marianas Archipelago, 2007

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Belt transects along 2 consecutively-placed, 25m transect lines were surveyed as part of Rapid Ecological Assessments conducted at 6 sites at Rota in the Marianas...

CRED REA Coral Population Parameters at Palmyra Atoll, Pacific Remote Island Areas (PRIAs), 2006

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Belt transects along 2 consecutively-placed, 25m transect lines were surveyed as part of Rapid Ecological Assessments conducted at 13 sites at Palmyra Atoll in the...

CRED REA Coral Health and Disease Assessment at Howland Island, Phoenix Islands, 2006

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Belt transects along 2 consecutively-placed, 25m transect lines were surveyed at 50-cm intervals as part of Rapid Ecological Assessments conducted at 6 sites at...

CRED REA Coral Population Parameters at Baker, Phoenix Islands, 2004

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Belt transects along 2 consecutively-placed, 25m transect lines were surveyed as part of Rapid Ecological Assessments conducted at 3 sites at Baker in the Phoenix...

CRED REA Coral Population Parameters at Johnston Atoll, Pacific Remote Island Areas (PRIAs) in 2008

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National Oceanic and Atmospheric Administration, Department of Commerce — Belt transects along 2 consecutively-placed, 25m transect lines were surveyed as part of Rapid Ecological Assessments conducted at 4 sites at Johnston Atoll in the...

CRED REA Coral Population Parameters at Pearl and Hermes Atoll, NW Hawaiian Islands (NWHI), 2006

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Belt transects along 2 consecutively-placed, 25m transect lines were surveyed as part of Rapid Ecological Assessments conducted at 13 sites at Pearl and Hermes Atoll...

CRED REA Coral Population Parameters at Jarvis, Pacific Remote Island Areas (PRIAs), 2006

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Belt transects along 2 consecutively-placed, 25m transect lines were surveyed as part of Rapid Ecological Assessments conducted at 9 sites at Jarvis in the Pacific...

CRED REA Coral Population Parameters at Midway Atoll, Northwestern Hawaiian Islands, 2003

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Belt transects along 2 consecutively-placed, 25m transect lines were surveyed as part of Rapid Ecological Assessments conducted at 9 sites at Midway Atoll in the...

CRED REA Coral Population Parameters at Laysan Island, Northwestern Hawaiiian Islands, 2004

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Belt transects along 2 consecutively-placed, 25m transect lines were surveyed as part of Rapid Ecological Assessments conducted at 3 sites at Laysan Island in the...

CRED REA Coral Health and Disease Assessment at Swain's Island, American Samoa 2006

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Belt transects along 2 consecutively-placed, 25m transect lines were surveyed at 50-cm intervals as part of Rapid Ecological Assessments conducted at 8 sites at...

Quantitative anatomical and behavioral analyses of regeneration and collateral sprouting following spinal cord transection in the nurse shark (ginglymostoma cirratum).

Science.gov (United States)

Gelderd, J B

1979-01-01

The spinal cord was transected at the mid-thoracic level in 32 nurse sharks. Four animals per group were sacrificed at intervals of 10, 20, 30, 40, 60 and 90 days postoperative. Two groups of fish underwent a subsequent spinla1 cord retransection at the same site at 90 days and were sacrificed 10 and 20 days later. Three sections of spinal cord were removed from each shark for histological analysis. Behaviorally, timed trials for swimming speed and a strength test for axial musculature contraction caudal to the lesion site were performed at 5 day postoperative intervals. Histological analysis showed little regeneration (9-13 percent) of two descending tracts 90 days following the lesion and no return of rostrally controlled movements caudal to the lesion. However, synaptic readjustment did occur caudal to the lesion. This phenomenon was attributed to local segmental sprouting of adjacent, intact nerve fibers. A close correlation was shown between this synaptic readjustment and the strength of uncontrollable undulatory movements seen caudal to the lesion site following spinal cord transection. The relationship of regeneration and collateral sprouting to quantitative behavioral changes is discussed.

Healing of periodontal defects and calcitonin gene related peptide expression following inferior alveolar nerve transection in rats.

Science.gov (United States)

Lv, Linlin; Wang, Yanzhi; Zhang, Jing; Zhang, Ting; Li, Shu

2014-06-01

The roles of nerve and neuropeptides in the process of bone formation and remolding have been studied previously. However, the effects of nervous system and neuropeptide on periodontal alveolar bone formation remained unknown. The aim of this study was to assess the effect of innervation on regeneration of alveolar bone and expression levels of calcitonin gene related peptide (CGRP) in periodontal tissues of rats, so as to have a better understanding of the effect of nerve and its related neuropeptide on periodontal tissue regeneration. Rats received transection of the left inferior alveolar nerve and a surgery to produce bilateral periodontal defect, then the alveolar tissue was obtained from animals of each group at week 1, 2, 4, 6 and 8 weeks after operation, respectively. Hematoxylin and eosin staining, and Masson staining were performed to evaluate the ability to restore and repair periodontal tissues at 4, 6 and 8 after surgery. Then new bone formation area and mineralized area were quantified using imagepro-plus6.0 software after pictures were taken under the microscope and SPSS17.0 was used for statistical analysis. Immunohistochemical staining was applied to investigate the expression of CGRP at 1, 2, 4, 6 and 8 weeks. Rats received transection of the left inferior alveolar nerve surgery and were then sacrificed at day 1, 3, 7, 14, 21, 28 after the operation. The change of CGRP expression in periodontal tissue was detected using immunohistochemical methods. The results showed that the volume of new bone formation was not significantly difference between the experimental and control groups, but the mineralized new bone area between the two groups was statistically significant. The level of CGRP expression was lower than normal at week 1, and then it began to rise in the next stage. The plateau, at higher than normal level, was reached at 6 weeks post-surgery. Results of transection of the left inferior alveolar nerve demonstrated the expression of CGRP

CRED REA Coral Population Paramaters at Rose Atoll, American Samoa, 2006

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Belt transects along 1 or 2 consecutively-placed, 25m transect lines were surveyed as part of Rapid Ecological Assessments conducted at 11 sites at Rose Atoll in...

CRED REA Coral Population Parameters at Kure Atoll, NW Hawaiian Islands (NWHI), 2006

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Belt transects along 2 consecutively-placed, 25m transect lines were surveyed as part of Rapid Ecological Assessments conducted at 9 sites at Kure Atoll in the NW...

CRED REA Coral Health and Disease Assessment at Ofu and Olosega Island, American Samoa 2006

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Belt transects along 2 consecutively-placed, 25m transect lines were surveyed at 50-cm intervals as part of Rapid Ecological Assessments conducted at 22 sites at Ofu...

MID-INFRARED ATOMIC FINE-STRUCTURE EMISSION-LINE SPECTRA OF LUMINOUS INFRARED GALAXIES: SPITZER/IRS SPECTRA OF THE GOALS SAMPLE

Energy Technology Data Exchange (ETDEWEB)

Inami, H. [National Optical Astronomy Observatory, Tucson, AZ 85719 (United States); Armus, L.; Stierwalt, S.; Díaz-Santos, T.; Surace, J.; Howell, J.; Marshall, J. [Spitzer Science Center, California Institute of Technology, CA 91125 (United States); Charmandaris, V. [Department of Physics and Institute of Theoretical and Computational Physics, University of Crete, GR-71003 Heraklion (Greece); Groves, B. [Max Planck Institute for Astronomy, Königstuhl 17, D-69117 Heidelberg (Germany); Kewley, L. [Research School of Astronomy and Astrophysics, The Australian National University, Cotter Road, Weston Creek, ACT 2611 (Australia); Petric, A. [Department of Astronomy, California Institute of Technology, MS 320-47, Pasadena, CA 91125 (United States); Rich, J. [The Observatories, Carnegie Institute of Washington, 813 Santa Barbara Street, Pasadena, CA 91101 (United States); Haan, S. [CSIRO Astronomy and Space Science, Marsfield, NSW 2122 (Australia); Evans, A. S. [Department of Astronomy, University of Virginia, P.O. Box 400325, Charlottesville, VA 22904 (United States); Mazzarella, J.; Lord, S. [Infrared Processing and Analysis Center, MS 100-22, California Institute of Technology, Pasadena, CA 91125 (United States); Appleton, P. [NASA Herschel Science Center, 770 South Wilson Avenue, Pasadena, CA 91125 (United States); Spoon, H. [Astronomy Department, Cornell University, Ithaca, NY 14853 (United States); Frayer, D. [National Radio Astronomy Observatory, P.O. Box 2, Green Bank, WV 24944 (United States); Matsuhara, H., E-mail: inami@noao.edu [Institute of Space and Astronautical Science, Japan Aerospace Exploration Agency (Japan); and others

2013-11-10

We present the data and our analysis of mid-infrared atomic fine-structure emission lines detected in Spitzer/Infrared Spectrograph high-resolution spectra of 202 local Luminous Infrared Galaxies (LIRGs) observed as part of the Great Observatories All-sky LIRG Survey (GOALS). We readily detect emission lines of [S IV], [Ne II], [Ne V], [Ne III], [S III]{sub 18.7{sub μm}}, [O IV], [Fe II], [S III]{sub 33.5{sub μm}}, and [Si II]. More than 75% of these galaxies are classified as starburst-dominated sources in the mid-infrared, based on the [Ne V]/[Ne II] line flux ratios and equivalent width of the 6.2 μm polycyclic aromatic hydrocarbon feature. We compare ratios of the emission-line fluxes to those predicted from stellar photo-ionization and shock-ionization models to constrain the physical and chemical properties of the gas in the starburst LIRG nuclei. Comparing the [S IV]/[Ne II] and [Ne III]/[Ne II] line ratios to the Starburst99-Mappings III models with an instantaneous burst history, the emission-line ratios suggest that the nuclear starbursts in our LIRGs have ages of 1-4.5 Myr, metallicities of 1-2 Z{sub ☉}, and ionization parameters of 2-8 × 10{sup 7} cm s{sup –1}. Based on the [S III]{sub 33.5{sub μm}}/[S III]{sub 18.7{sub μm}} ratios, the electron density in LIRG nuclei is typically one to a few hundred cm{sup –3}, with a median electron density of ∼300 cm{sup –3}, for those sources above the low density limit for these lines. We also find that strong shocks are likely present in 10 starburst-dominated sources of our sample. A significant fraction of the GOALS sources (80) have resolved neon emission-line profiles (FWHM ≥600 km s{sup –1}) and five show clear differences in the velocities of the [Ne III] or [Ne V] emission lines, relative to [Ne II], of more than 200 km s{sup –1}. Furthermore, six starburst and five active galactic nucleus dominated LIRGs show a clear trend of increasing line width with ionization potential

On-line coupling of sample preconcentration by LVSEP with gel electrophoretic separation on T-channel chips.

Science.gov (United States)

Kitagawa, Fumihiko; Kinami, Saeko; Takegawa, Yuuki; Nukatsuka, Isoshi; Sueyoshi, Kenji; Kawai, Takayuki; Otsuka, Koji

2017-01-01

To achieve an on-line coupling of the sample preconcentration by a large-volume sample stacking with an electroosmotic flow pump (LVSEP) with microchip gel electrophoresis (MCGE), a sample solution, a background solution for LVSEP and a sieving solution for MCGE were loaded in a T-form channel and three reservoirs on PDMS microchips. By utilizing the difference in the flow resistance of the two channels, a low-viscosity sample and a viscous polymer solution were easily introduced into the LVSEP and MCGE channels, respectively. Fluorescence imaging of the sequential LVSEP-MCGE processes clearly demonstrated that a faster stacking of anionic fluorescein and successive introduction into the MCGE channel can be carried out on the T-channel chip. To evaluate the preconcentration performance, a conventional MCZE analysis of fluorescein on the cross-channel chip was compared with LVSEP-MCGE on the short T-channel chip, and as a result that the value of sensitive enhancement factor (SEF) was estimated to be 370. The repeatability of the peak height was good with the RSD value of 3.2%, indicating the robustness of the enrichment performance. In the successive LVSEP-MCGE analysis of φX174/HaeIII digest, the DNA fragments were well enriched to a sharp peak in the LVSEP channel, and they were separated in the MCGE channel, whose electropherogram was well-resembled with that in the conventional MCGE. The values of SEF for the DNA fragments were calculated to be ranging from 74 to 108. Thus, the successive LVSEP-MCGE analysis was effective for both preconcentrating and separating DNA fragments. © 2016 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Land-Air Interactions over Urban-Rural Transects Using Satellite Observations: Analysis over Delhi, India from 1991–2016

Directory of Open Access Journals (Sweden)

Madhavi Jain

2017-12-01

Full Text Available Over the past four decades Delhi, India, has witnessed rapid urbanization and change in land use land cover (LULC pattern, with most of the cultivable areas and wasteland being converted into built-up areas. Presently around 40% land is under built-up area, a drastic rise of 30% from 1977. The effect of changing LULC, at a local scale, on various variables-land surface temperature (LST, normalized difference vegetation index (NDVI, emissivity, albedo, evaporation, Bowen ratio, and planetary boundary layer (PBL height, from 1991–2016, is investigated. To assess the spatio-temporal dynamics of land-air interactions, we select two different 100 km transects covering the NE-SW and NW-SE expanse of Delhi and its adjoining areas. High NDVI and emissivity is found for regions with green cover and drastic reduction is noted in built-up area clusters. In both of the transects, land surface variations manifest itself in patterns of LST variation. Parametric and non-parametric correlations are able to statistically establish the land-air interactions in the city. NDVI, an indirect indicator for LULC classes, significantly helps in understanding the modifications in LST and ultimately air temperature. Significant, strong positive relationships exist between skin temperature and evaporation, skin temperature and PBL height, and PBL height and evaporation, providing insights into the meteorological changes that are associated with urbanization.

The effect of high mesencephalic transection (cerveau isolé) and pentobarbital on basal forebrain mechanisms of EEG synchronization.

Science.gov (United States)

Obál, F; Benedek, G; Szikszay, M; Obál, F

1979-01-01

A study was made of the effects of high mesencephalic transection (cerveau isolé) and low doses of pentobarbital on the cortical synchronizations elicited in acute immobilized cats by (a) low frequency stimulation of the lateral hypothalamus (HL) and nucleus ventralis anterior thalami (VA) and (b) by low and high frequency stimulation of the laterobasal preoptic region (RPO) and olfactory tubercle (TbOf). The results obtained were as follows: (1) The synchronizations induced by basal forebrain stimulations were found to survive in acute cerveau isolé cats, moreover, even a facilitation of the synchronizing effect were observed. (2) A gradual facilitation was observed upon TbOf and RPO stimulation, while in the case of VA and HL stimulations, the facilitation appeared immediately after the transection. (3) Low doses of pentobarbital depressed the cortical effects of TbOf stimulation, while an increase of the synchronizing effect of low frequency VA and HL stimulation was found. The observations suggested that (i) the synchronizing mechanism in the ventral part of the basal forebrain (RPO and TbOf) differs from that of the thalamus and HL; (ii) the basal forebrain synchronizing mechanism is effective without the contribution of the brain stem; (iii) the mechanism responsible for the synchronizing effect of low frequency HL stimulation is similar as that described for the thalamus.

Determination of trace thorium in water samples by flow injection fluorescence spectrophotometry with microcolumn on-line preconcentration

International Nuclear Information System (INIS)

Shen Zhuqin; Zhang Yanan; Guo Dongfa; Huang Yun

1991-01-01

An on-line preconcentration time resolved fluorimetric method was developed for the determination of trace thorium in water, based on luminescence of complex Th-morin-TOPO (or TRPO)-sodium lauryl sulfate in sulfuric acid medium. Interferences from companied cations, such as Al 3+ and Zr 4+ , which emit fluorescence with much slower rising rate at the same condition were effectively eliminated through optimization of the manifold parameters and precisely controlling of the elution flow rate. Effects of nearly 40 ions were also investigated. The detection limit, the liner range and relative standard deviation for 50 ng Th are 2.5 ng/L, 0∼80 ng and 3.6%, respectively. Sampling rate is 30 per hour

Salix transect of Europe: variation in ploidy and genome size in willow-associated common nettle, Urtica dioica L. sens. lat., from Greece to arctic Norway.

Science.gov (United States)

Cronk, Quentin; Hidalgo, Oriane; Pellicer, Jaume; Percy, Diana; Leitch, Ilia J

2016-01-01

The common stinging nettle, Urtica dioica L. sensu lato, is an invertebrate "superhost", its clonal patches maintaining large populations of insects and molluscs. It is extremely widespread in Europe and highly variable, and two ploidy levels (diploid and tetraploid) are known. However, geographical patterns in cytotype variation require further study. We assembled a collection of nettles in conjunction with a transect of Europe from the Aegean to Arctic Norway (primarily conducted to examine the diversity of Salix and Salix -associated insects). Using flow cytometry to measure genome size, our sample of 29 plants reveals 5 diploids and 24 tetraploids. Two diploids were found in SE Europe (Bulgaria and Romania) and three diploids in S. Finland. More detailed cytotype surveys in these regions are suggested. The tetraploid genome size (2C value) varied between accessions from 2.36 to 2.59 pg. The diploids varied from 1.31 to 1.35 pg per 2C nucleus, equivalent to a haploid genome size of c. 650 Mbp. Within the tetraploids, we find that the most northerly samples (from N. Finland and arctic Norway) have a generally higher genome size. This is possibly indicative of a distinct population in this region.

Liver parenchyma transection-first approach in hemihepatectomy with en bloc caudate lobectomy for hilar cholangiocarcinoma: A safe technique to secure favorable surgical outcomes.

Science.gov (United States)

Kawabata, Yasunari; Hayashi, Hikota; Yano, Seiji; Tajima, Yoshitsugu

2017-06-01

Although hemihepatectomy with total caudate lobectomy (hemiHx-tc) is essential for the surgical treatment of hilar cholangiocarcinoma, the advantage of an anterior approach for hemiHx-tc has not been fully discussed technically; the significance of an anterior approach without liver mobilization for preventing infectious complications also remains unknown. The liver parenchyma transection-first approach (Hp-first) technique is an early transection of the hepatic parenchyma without mobilization of the liver that utilizes a modified liver-hanging maneuver to avoid damaging the future remnant liver. Between May 2010 and August 2016, a total of 40 consecutive patients underwent surgery for hilar cholangiocarcinoma. Of these, 19 patients underwent a conventional hemihepatectomy with total caudate lobectomy (cHx), while 21 patients received a Hp-first. The patients in the Hp-first group had significantly less intraoperative blood loss (P hilar cholangiocarcinoma because it resulted in improved surgical outcomes as compared with the conventional approach. © 2017 Wiley Periodicals, Inc.

Tree-ring growth patterns and climatic signals along a vertical transect of larch sites in the Simplon and Rhône Valleys (Switzerland)

Science.gov (United States)

Riechelmann, Dana F. C.; Esper, Jan

2017-04-01

State-of-the-art millennial long temperature reconstructions from the European Alps integrate wood samples of Larix decidua Mill. from the Lötschental and Simplon regions in Switzerland (Büntgen et al., 2005; 2006). Some of the oldest samples that enable the extension of the time-series back into the first millennium AD are obtained from old buildings in Simplon Village, through the precise location of these samples and the elevation of sampling sites remain unknown. We here evaluate the growth characteristics of larch tree-ring width data along a vertical transect in the Simplon and Rhône valleys. 330 trees from nine sites in 985, 1100, 1400, 1575, 1710, 1712, 1900, 2020, and 2150 m asl have been sampled and analysed for their climate signals. The results indicate a stronger temperature signal in the tree-ring width with increasing elevation. The lower the sites the more a drought signal is imprinted in the ring width data. The intermediate site at 1400 m asl does not show any pronounced climate signal. A comparison of growth patterns of living-tree sites with samples from the historical buildings in Simplon Village (Riechelmann et al., 2013) indicates the construction timber to origin from intermediate to higher elevations. We therefore do not expect strong temperature signal from these timbers. References: Büntgen, U., Esper, J., Frank, D.C., Nicolussi, K., Schmidhalter, M., 2005. A 1052-year tree-ring proxy for Alpine summer temperatures. Climate Dynamics 25: 141-153. Büntgen, U., Frank, D.C., Nievergelt, D., Esper J., 2006. Summer temperature variations in the European Alps, A.D. 755-2004. Journal of Climate 19: 5606-5623. Riechelmann, D.F.C., Schmidhalter, M., Büntgen, U., Esper, J., 2013. Extending a high-elevation larch ring width chronology from the Simplon region in the Swiss Alps over the past millenium. TRACE 11:103-108.

Long-Term Monitoring of the Broad-Line Region Properties in a Selected Sample of AGN

Energy Technology Data Exchange (ETDEWEB)

Ilić, Dragana [Department of Astronomy, Faculty of Mathematics, University of Belgrade, Belgrade (Serbia); Shapovalova, Alla I. [Special Astrophysical Observatory, Russian Academy of Sciences, Nizhnii Arkhyz (Russian Federation); Popović, Luka Č. [Department of Astronomy, Faculty of Mathematics, University of Belgrade, Belgrade (Serbia); Astronomical Observatory, Belgrade (Serbia); Chavushyan, Vahram [Instituto Nacional de Astrofísica, Óptica y Electrónica, Puebla (Mexico); Burenkov, Alexander N. [Special Astrophysical Observatory, Russian Academy of Sciences, Nizhnii Arkhyz (Russian Federation); Kollatschny, Wolfram [Institut fuer Astrophysik, Universitaet Goettingen, Göttingen (Germany); Kovačević, Andjelka [Department of Astronomy, Faculty of Mathematics, University of Belgrade, Belgrade (Serbia); Marčeta-Mandić, Sladjana [Department of Astronomy, Faculty of Mathematics, University of Belgrade, Belgrade (Serbia); Astronomical Observatory, Belgrade (Serbia); Rakić, Nemanja [Department of Astronomy, Faculty of Mathematics, University of Belgrade, Belgrade (Serbia); Faculty of Science, University of Banjaluka, Banjaluka, Republic of Srpska (Bosnia and Herzegovina); La Mura, Giovanni; Rafanelli, Piero, E-mail: dilic@math.rs [Department of Physics and Astronomy, University of Padova, Padova (Italy)

2017-09-14

We present the results of the long-term optical monitoring campaign of active galactic nuclei (AGN) coordinated by the Special Astrophysical Observatory of the Russian Academy of Science. This campaign has produced a remarkable set of optical spectra, since we have monitored for several decades different types of broad-line (type 1) AGN, from a Seyfert 1, double-peaked line, radio loud and radio quiet AGN, to a supermassive binary black hole candidate. Our analysis of the properties of the broad line region (BLR) of these objects is based on the variability of the broad emission lines. We hereby give a comparative review of the variability properties of the broad emission lines and the BLR of seven different type 1 AGNs, emphasizing some important results, such as the variability rate, the BLR geometry, and the presence of the intrinsic Baldwin effect. We are discussing the difference and similarity in the continuum and emission line variability, focusing on what is the impact of our results to the supermassive black hole mass determination from the BLR properties.

Long-Term Monitoring of the Broad-Line Region Properties in a Selected Sample of AGN

Directory of Open Access Journals (Sweden)

Dragana Ilić

2017-09-01

Full Text Available We present the results of the long-term optical monitoring campaign of active galactic nuclei (AGN coordinated by the Special Astrophysical Observatory of the Russian Academy of Science. This campaign has produced a remarkable set of optical spectra, since we have monitored for several decades different types of broad-line (type 1 AGN, from a Seyfert 1, double-peaked line, radio loud and radio quiet AGN, to a supermassive binary black hole candidate. Our analysis of the properties of the broad line region (BLR of these objects is based on the variability of the broad emission lines. We hereby give a comparative review of the variability properties of the broad emission lines and the BLR of seven different type 1 AGNs, emphasizing some important results, such as the variability rate, the BLR geometry, and the presence of the intrinsic Baldwin effect. We are discussing the difference and similarity in the continuum and emission line variability, focusing on what is the impact of our results to the supermassive black hole mass determination from the BLR properties.

Extreme emission-line galaxies out to z ~ 1 in zCOSMOS. I. Sample and characterization of global properties

Science.gov (United States)

Amorín, R.; Pérez-Montero, E.; Contini, T.; Vílchez, J. M.; Bolzonella, M.; Tasca, L. A. M.; Lamareille, F.; Zamorani, G.; Maier, C.; Carollo, C. M.; Kneib, J.-P.; Le Fèvre, O.; Lilly, S.; Mainieri, V.; Renzini, A.; Scodeggio, M.; Bardelli, S.; Bongiorno, A.; Caputi, K.; Cucciati, O.; de la Torre, S.; de Ravel, L.; Franzetti, P.; Garilli, B.; Iovino, A.; Kampczyk, P.; Knobel, C.; Kovač, K.; Le Borgne, J.-F.; Le Brun, V.; Mignoli, M.; Pellò, R.; Peng, Y.; Presotto, V.; Ricciardelli, E.; Silverman, J. D.; Tanaka, M.; Tresse, L.; Vergani, D.; Zucca, E.

2015-06-01

Context. The study of large and representative samples of low-metallicity star-forming galaxies at different cosmic epochs is of great interest to the detailed understanding of the assembly history and evolution of low-mass galaxies. Aims: We present a thorough characterization of a large sample of 183 extreme emission-line galaxies (EELGs) at redshift 0.11 ≤ z ≤ 0.93 selected from the 20k zCOSMOS bright survey because of their unusually large emission line equivalent widths. Methods: We use multiwavelength COSMOS photometry, HST-ACS I-band imaging, and optical zCOSMOS spectroscopy to derive the main global properties of star-forming EELGs, such as sizes, stellar masses, star formation rates (SFR), and reliable oxygen abundances using both "direct" and "strong-line" methods. Results: The EELGs are extremely compact (r50 ~ 1.3 kpc), low-mass (M∗ ~ 107-1010 M⊙) galaxies forming stars at unusually high specific star formation rates (sSFR ≡ SFR/M⋆ up to 10-7 yr-1) compared to main sequence star-forming galaxies of the same stellar mass and redshift. At rest-frame UV wavelengths, the EELGs are luminous and show high surface brightness and include strong Lyα emitters, as revealed by GALEX spectroscopy. We show that zCOSMOS EELGs are high-ionization, low-metallicity systems, with median 12+log (O/H) = 8.16 ± 0.21 (0.2 Z⊙) including a handful of extremely metal-deficient (Universe, EELGs are most often found in relative isolation. While only very few EELGs belong to compact groups, almost one third of them are found in spectroscopically confirmed loose pairs or triplets. Conclusions: The zCOSMOS EELGs are galaxies caught in a transient and probably early period of their evolution, where they are efficiently building up a significant fraction of their present-day stellar mass in an ongoing, galaxy-wide starburst. Therefore, the EELGs constitute an ideal benchmark for comparison studies between low- and high-redshift low-mass star-forming galaxies. Full

The isolation of the temperature effect on branched GDGT distribution in an elevation transect of the Eastern Cordillera, Colombia

Science.gov (United States)

Anderson, V. J.; Shanahan, T. M.; Saylor, J.; Horton, B. K.

2012-12-01

Recently, the distribution of branched GDGT's (glycerol dialkyl glycerol tetraethers) has been proposed as a proxy for temperature and pH in soils via the MBT/CBT index, and has been used to reconstruct past temperature variations in a number of settings ranging from marine sediments to loess deposits and paleosols. However, empirical calibrations of the MBT/CBT index against temperature show significant scatter, leading to uncertainties as large as ±2 degrees C . In this study we seek to add to and improve upon the existing soil calibration using a new set of samples spanning a large elevation (and temperature) gradient in the Eastern Cordillera of Colombia. At each site we buried temperature loggers to constrain the diurnal and seasonal temperature experienced by each soil sample. Located only 5 degrees north of the equator, our sites experience a very small seasonal temperature variation - most sites display an annual range of less than 4 degrees C. In addition, the pH of all of the soils is almost invariant across the transect, with the vast majority of samples having pH's between 4 and 5. This dataset represents a "best-case" scenario - small variations in seasonal temperature, pH, and well-constrained instrumental data - which allow us to examine the brGDGT-temperature relationship in the absence of major confounding factors such as seasonality and soil chemistry. Interestingly, the relationship between temperature and the MBT/CBT index is not improved using this dataset, suggesting that these factors are not the cause of the anomalous scatter in the calibration dataset. However, we find that using other parameterizations for the regression equation instead of the MBT and CBT indices, the errors in our temperature estimates are significantly reduced.

On-line preconcentration and determination of mercury in biological and environmental samples by cold vapor-atomic absorption spectrometry

International Nuclear Information System (INIS)

Ferrua, N.; Cerutti, S.; Salonia, J.A.; Olsina, R.A.; Martinez, L.D.

2007-01-01

An on-line procedure for the determination of traces of total mercury in environmental and biological samples is described. The present methodology combines cold vapor generation associated to atomic absorption spectrometry (CV-AAS) with preconcentration of the analyte on a minicolumn packed with activated carbon. The retained analyte was quantitatively eluted from the minicolumn with nitric acid. After that, volatile specie of mercury was generated by merging the acidified sample and sodium tetrahydroborate(III) in a continuous flow system. The gaseous analyte was subsequently introduced via a stream of Ar carrier into the atomizer device. Optimizations of both, preconcentration and mercury volatile specie generation variables were carried out using two level full factorial design (2 3 ) with 3 replicates of the central point. Considering a sample consumption of 25 mL, an enrichment factor of 13-fold was obtained. The detection limit (3σ) was 10 ng L -1 and the precision (relative standard deviation) was 3.1% (n = 10) at the 5 μg L -1 level. The calibration curve using the preconcentration system for mercury was linear with a correlation coefficient of 0.9995 at levels near the detection limit up to at least 1000 μg L -1 . Satisfactory results were obtained for the analysis of mercury in tap water and hair samples

Permafrost and lakes control river isotope composition across a boreal Arctic transect in the Western Siberian lowlands

Science.gov (United States)

Ala-aho, P.; Soulsby, C.; Pokrovsky, O. S.; Kirpotin, S. N.; Karlsson, J.; Serikova, S.; Manasypov, R.; Lim, A.; Krickov, I.; Kolesnichenko, L. G.; Laudon, H.; Tetzlaff, D.

2018-03-01

The Western Siberian Lowlands (WSL) store large quantities of organic carbon that will be exposed and mobilized by the thawing of permafrost. The fate of mobilized carbon, however, is not well understood, partly because of inadequate knowledge of hydrological controls in the region which has a vast low-relief surface area, extensive lake and wetland coverage and gradually increasing permafrost influence. We used stable water isotopes to improve our understanding of dominant landscape controls on the hydrology of the WSL. We sampled rivers along a 1700 km South-North transect from permafrost-free to continuous permafrost repeatedly over three years, and derived isotope proxies for catchment hydrological responsiveness and connectivity. We found correlations between the isotope proxies and catchment characteristics, suggesting that lakes and wetlands are intimately connected to rivers, and that permafrost increases the responsiveness of the catchment to rainfall and snowmelt events, reducing catchment mean transit times. Our work provides rare isotope-based field evidence that permafrost and lakes/wetlands influence hydrological pathways across a wide range of spatial scales (10-105 km2) and permafrost coverage (0%-70%). This has important implications, because both permafrost extent and lake/wetland coverage are affected by permafrost thaw in the changing climate. Changes in these hydrological landscape controls are likely to alter carbon export and emission via inland waters, which may be of global significance.

An on-line push/pull perfusion-based hollow-fiber liquid-phase microextraction system for high-performance liquid chromatographic determination of alkylphenols in water samples.

Science.gov (United States)

Chao, Yu-Ying; Jian, Zhi-Xuan; Tu, Yi-Ming; Wang, Hsaio-Wen; Huang, Yeou-Lih

2013-06-07

In this study, we employed a novel on-line method, push/pull perfusion hollow-fiber liquid-phase microextraction (PPP-HF-LPME), to extract 4-tert-butylphenol, 2,4-di-tert-butylphenol, 4-n-nonylphenol, and 4-n-octylphenol from river and tap water samples; we then separated and quantified the extracted analytes through high-performance liquid chromatography (HPLC). Using this approach, we overcame the problem of fluid loss across the porous HF membrane to the donor phase, permitting on-line coupling of HF-LPME to HPLC. In our PPP-HF-LPME system, we used a push/pull syringe pump as the driving source to perfuse the acceptor phase, while employing a heating mantle and an ultrasonic probe to accelerate mass transfer. We optimized the experimental conditions such as the nature of the HF supported intermediary phase and the acceptor phase, the composition of the donor and acceptor phases, the sample temperature, and the sonication conditions. Our proposed method provided relative standard deviations of 3.1-6.2%, coefficients of determination (r(2)) of 0.9989-0.9998, and limits of detection of 0.03-0.2 ng mL(-1) for the analytes under the optimized conditions. When we applied this method to analyses of river and tap water samples, our results confirmed that this microextraction technique allows reliable monitoring of alkylphenols in water samples.

Human dental pulp-derived stem cells promote locomotor recovery after complete transection of the rat spinal cord by multiple neuro-regenerative mechanisms.

Science.gov (United States)

Sakai, Kiyoshi; Yamamoto, Akihito; Matsubara, Kohki; Nakamura, Shoko; Naruse, Mami; Yamagata, Mari; Sakamoto, Kazuma; Tauchi, Ryoji; Wakao, Norimitsu; Imagama, Shiro; Hibi, Hideharu; Kadomatsu, Kenji; Ishiguro, Naoki; Ueda, Minoru

2012-01-01

Spinal cord injury (SCI) often leads to persistent functional deficits due to loss of neurons and glia and to limited axonal regeneration after injury. Here we report that transplantation of human dental pulp stem cells into the completely transected adult rat spinal cord resulted in marked recovery of hind limb locomotor functions. Transplantation of human bone marrow stromal cells or skin-derived fibroblasts led to substantially less recovery of locomotor function. The human dental pulp stem cells exhibited three major neuroregenerative activities. First, they inhibited the SCI-induced apoptosis of neurons, astrocytes, and oligodendrocytes, which improved the preservation of neuronal filaments and myelin sheaths. Second, they promoted the regeneration of transected axons by directly inhibiting multiple axon growth inhibitors, including chondroitin sulfate proteoglycan and myelin-associated glycoprotein, via paracrine mechanisms. Last, they replaced lost cells by differentiating into mature oligodendrocytes under the extreme conditions of SCI. Our data demonstrate that tooth-derived stem cells may provide therapeutic benefits for treating SCI through both cell-autonomous and paracrine neuroregenerative activities.

A New Generation of Thermal Desorption Technology Incorporating Multi Mode Sampling (NRT/DAAMS/Liquid Agent) for Both on and off Line Analysis of Trace Level Airbone Chemical Warfare Agents

International Nuclear Information System (INIS)

Roberts, G. M.

2007-01-01

A multi functional, twin-trap, electrically-cooled thermal desorption (TD) system (TT24-7) will be discussed for the analysis of airborne trace level chemical warfare agents. This technology can operate in both military environments (CW stockpile, or destruction facilities) and civilian locations where it is used to monitor for accidental or terrorist release of acutely toxic substances. The TD system interfaces to GC, GCMS or direct MS analytical platforms and provides for on-line continuous air monitoring with no sampling time blind spots and within a near real time (NRT) context. Using this technology enables on-line sub ppt levels of agent detection from a vapour sample. In addition to continuous sampling the system has the capacity for off-line single (DAAMS) tube analysis and the ability to receive an external liquid agent injection. The multi mode sampling functionality provides considerable flexibility to the TD system, allowing continuous monitoring of an environment for toxic substances plus the ability to analyse calibration standards. A calibration solution can be introduced via a conventional sampling tube on to either cold trap or as a direct liquid injection using a conventional capillary split/splitless injection port within a gas chromatograph. Low level (linearity) data will be supplied showing the TT24-7 analyzing a variety of CW compounds including free (underivitised) VX using the three sampling modes described above. Stepwise changes in vapor generated agent concentrations will be shown, and this is cross referenced against direct liquid agent introduction, and the tube sampling modes. This technology is in use today in several geographies around the world in both static and mobile analytical laboratories. (author)

Levels of mercury in alligators (Alligator mississippiensis) collected along a transect through the Florida Everglades

Science.gov (United States)

Rumbold, D.G.; Fink, L.E.; Laine, K.A.; Niemczyk, S.L.; Chandrasekhar, T.; Wankel, Scott D.; Kendall, C.

2002-01-01

As part of a multi-agency study of alligator health, 28 American alligators (Alligator mississippiensis) were captured along a transect through the Florida Everglades in 1999. Liver and tail muscle tissues were sampled and analyzed on a wet weight basis for total mercury (THg) using cold-vapor atomic absorption spectrophotometry. All tissues had detectable concentrations of THg that ranged from 0.6 to 17 mg/kg in liver and from 0.1 to 1.8 mg/kg in tail muscle. THg was more concentrated in liver tissue than tail muscle, but levels were highly correlated between tissues. THg concentrations in tissue differed significantly among locations, with animals from Everglades National Park (ENP) having mean concentrations of THg in liver (10.4 mg/kg) and tail muscle (1.2 mg/kg) that were two-fold higher than basin-wide averages (4.9 and 0.64 mg/kg, respectively). The reasons for higher contamination of ENP alligators were unclear and could not be explained by differences in sex, length, weight or animal age. While ??15N values were positively correlated with THg concentrations in tail muscle, spatial patterns in isotopic composition did not explain the elevated THg levels in ENP alligators. Therefore, it appears that ENP alligators were more highly exposed to mercury in their environment than individuals in other areas. Comparisons to a previous survey by Yanochko et al. [Arch Environ Contam Toxicol 32 (1997) 323] suggest that mercury levels have declined in some Everglades alligators since 1994. ?? 2002 Elsevier Science B.V. All rights reserved.

Molecular changes in articular cartilage and subchondral bone in the rat anterior cruciate ligament transection and meniscectomized models of osteoarthritis

OpenAIRE

Zhuo Ya; Hayami Tadashi; Pickarski Maureen; Duong Le T

2011-01-01

Abstract Background Osteoarthritis (OA) is a debilitating, progressive joint disease. Methods Similar to the disease progression in humans, sequential events of early cartilage degradation, subchondral osteopenia followed by sclerosis, and late osteophyte formation were demonstrated in the anterior cruciate ligament transection (ACLT) or ACLT with partial medial meniscectomy (ACLT + MMx) rat OA models. We describe a reliable and consistent method to examine the time dependent changes in the g...

A case report of a Wada test after dominant hemisphere multiple hippocampal transections: Pathophysiology of confusion after amobarbital injection

Directory of Open Access Journals (Sweden)

Patrick Landazuri

2014-01-01

Full Text Available Dialepsis is defined as a predominant alteration of consciousness with preservation of motor tone and the ability to perform movements. While dialepsis is a common feature of both focal and generalized epilepsies, its precise symptomatogenic zone and pathogenesis remain undefined. This case report describes a patient who underwent intracarotid amobarbital procedures before and after dominant hemisphere multiple hippocampal transections. From our observations, we propose a possible pathogenesis for the generation of dialeptic seizures.

Measurement of radioactive lines in powdered milk samples in Londrina (Parana State, Brazil) region

International Nuclear Information System (INIS)

Melquiades, Fabio Luiz

2000-01-01

This work deals with the measurement of radioactive lines in powdered milk, with high resolution gamma spectrometry, using a HPGe detector with relative efficiency of 10%, coupled to the electronic nuclear chain and a multichannel card of 8192 channels. Some tests were realized before beginning the measurements. The first of them was to define the shield to be used, making several measured with different shields according to the available materials, opting finally for a shield composed of bricks of lead (10 cm thickness), plates of iron (4nm thickness) and of aluminum (2 mm thickness). Four different geometries for the samples recipients were tested, and the Marinelli beaker of 2,1 liters totally filled was the one which supplied the best peak/background ratio. A statistical inference was also realized to determine the sampling that represents each one of the lots of milk to be measured, resulting in a number of 6 samples, for a confidence level of 95%. Two different kinds of powdered milk produced at Londrina were analyzed, Integral Powdered Milk Cativa and Integral Powdered Milk Polly. The samples were properly put in the Marinelli beaker of 2,1 L, sealed and kept for 40 days to reach the secular equilibrium. The counting time for each measurement was two days. It was possible to identify the radionuclides 40 K, 137 Cs and 232 Th (from 208 Tl), whose activities were calculated according to the International Atomic Energy Agency norms (IAEA, 1989). The detector efficiency was measured using calibrated samples, prepared with the certified reference materials IAEA-326 and IAEA-375. Corrections for self-absorption were accomplished, based on measures of samples with different densities. The results obtained for the powdered milk Cativa were: 464± 12 Bq/kg for 40 K, 3,46 ± 1,05 and 0,46 ± 1,05 and 0,46 ± 0,16 Bq/kg for the minimum detectable activities of 137 Cs and 232 Th, respectively. For the milk Polly, the results were: 452±10 Bq/kg for 40 K, 3,19 ± 0

Population Studies and Carrageenan Properties in Eight Gigartinales (Rhodophyta from Western Coast of Portugal

Directory of Open Access Journals (Sweden)

Leonel Pereira

2013-01-01

Full Text Available Eight carrageenophytes, representing seven genera and three families of Gigartinales (Florideophyceae, were studied for 15 months. The reproductive status, dry weight, and carrageenan content have been followed by a monthly random sampling. The highest carrageenan yields were found in Chondracanthus acicularis (61.1%, Gigartina pistillata (59.7%, and Chondracanthus teedei var. lusitanicus (58.0%. Species of Cystocloniaceae family produces predominantly iota-carrageenans; Gigartinaceae family produces hybrid kappa-iota carrageenans (gametophytic plants and lambda-family carrageenans (sporophytic plants; Phyllophoraceae family produces kappa-iota-hybrid carrageenans. Quadrate destructive sampling method was used to determine the biomass and line transect. Quadrate nondestructive sampling method, applied along a perpendicular transect to the shoreline, was used to calculate the carrageenophytes cover in two periods: autumn/winter and spring/summer. The highest cover and biomass were found in Chondrus crispus (3.75%–570 g/m2, Chondracanthus acicularis (3.45%–99 g/m2, Chondracanthus teedei var. lusitanicus (2.45%–207.5 g/m2, and Mastocarpus stellatus (2.02%–520 g/m2.

Population studies and carrageenan properties in eight Gigartinales (Rhodophyta) from Western Coast of Portugal.

Science.gov (United States)

Pereira, Leonel

2013-01-01

Eight carrageenophytes, representing seven genera and three families of Gigartinales (Florideophyceae), were studied for 15 months. The reproductive status, dry weight, and carrageenan content have been followed by a monthly random sampling. The highest carrageenan yields were found in Chondracanthus acicularis (61.1%), Gigartina pistillata (59.7%), and Chondracanthus teedei var. lusitanicus (58.0%). Species of Cystocloniaceae family produces predominantly iota-carrageenans; Gigartinaceae family produces hybrid kappa-iota carrageenans (gametophytic plants) and lambda-family carrageenans (sporophytic plants); Phyllophoraceae family produces kappa-iota-hybrid carrageenans. Quadrate destructive sampling method was used to determine the biomass and line transect. Quadrate nondestructive sampling method, applied along a perpendicular transect to the shoreline, was used to calculate the carrageenophytes cover in two periods: autumn/winter and spring/summer. The highest cover and biomass were found in Chondrus crispus (3.75%-570 g/m(2)), Chondracanthus acicularis (3.45%-99 g/m(2)), Chondracanthus teedei var. lusitanicus (2.45%-207.5 g/m(2)), and Mastocarpus stellatus (2.02%-520 g/m(2)).

Early hemi-diaphragmatic plication following intraoperative phrenic nerve transection during complete AV canal repair

Directory of Open Access Journals (Sweden)

Hamad Alowayshiq

2018-04-01

Full Text Available Unilateral diaphragmatic palsy reduces pulmonary function by about 25% in older children and usually it is well tolerated; however, it causes severe respiratory distress in infants and young children. Diaphragmatic plication performed later than 10 days after cardiac surgery for patients under 1 year of age was associated with higher incidence of pneumonia and mortality. The management of the diaphragmatic paralysis due to phrenic nerve injury aiming mainly to preserve the respiratory function. Until now, the optimal management of diaphragmatic palsy in children who have undergone cardiac surgery remains controversial and consists of prolonged ventilation or diaphragmatic plication. In our case, many factors supported early diaphragmatic plication, the age of the patient, post-operative AV canal repair with severe pulmonary hypertension, and clear transection of the left phrenic nerve diagnosed intraoperatively.

Pacific Reef Assessment and Monitoring Program: Rapid Ecological Assessments of Fish Belt Transect Surveys (BLT) at Coral Reef Sites across the Pacific Ocean from 2000 to 2009

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Belt transects (BLT) is one of the non-invasive underwater-survey methods to enumerate the diverse components of diurnally active shallow-water reef fish...

Quantitative histological grading methods to assess subchondral bone and synovium changes subsequent to medial meniscus transection in the rat.

Science.gov (United States)

Kloefkorn, Heidi E; Allen, Kyle D

The importance of the medial meniscus to knee health is demonstrated by studies which show meniscus injuries significantly increase the likelihood of developing osteoarthritis (OA), and knee OA can be modeled in rodents using simulated meniscus injuries. Traditionally, histological assessments of OA in these models have focused on damage to the articular cartilage; however, OA is now viewed as a disease of the entire joint as an organ system. The aim of this study was to develop quantitative histological measures of bone and synovial changes in a rat medial meniscus injury model of knee OA. To initiate OA, a medial meniscus transection (MMT) and a medial collateral ligament transection (MCLT) were performed in 32 male Lewis rats (MMT group). MCLT alone served as the sham procedure in 32 additional rats (MCLT sham group). At weeks 1, 2, 4, and 6 post-surgery, histological assessment of subchondral bone and synovium was performed (n = 8 per group per time point). Trabecular bone area and the ossification width at the osteochondral interface increased in both the MMT and MCLT groups. Subintimal synovial cell morphology also changed in MMT and MCLT groups relative to naïve animals. OA affects the joint as an organ system, and quantifying changes throughout an entire joint can improve our understanding of the relationship between joint destruction and painful OA symptoms following meniscus injury.

Restoration of anatomical continuity after spinal cord transection depends on Wnt/β-catenin signaling in larval zebrafish

Directory of Open Access Journals (Sweden)

Daniel Wehner

2018-02-01

Full Text Available This data article contains descriptive and experimental data on spinal cord regeneration in larval zebrafish and its dependence on Wnt/β-catenin signaling. Analyzing spread of intraspinally injected fluorescent dextran showed that anatomical continuity is rapidly restored after complete spinal cord transection. Pharmacological interference with Wnt/β-catenin signaling (IWR-1 impaired restoration of spinal continuity. For further details and experimental findings please refer to the research article by Wehner et al. Wnt signaling controls pro-regenerative Collagen XII in functional spinal cord regeneration in zebrafish (Wehner et al., 2017 [1]. Keywords: Wnt, Beta-catenin, Regeneration, Spinal cord, Zebrafish

Studies on Colombian cryptogams XX. A transect analysis of the bryophyte vegetation along an altitudinal gradient on the Sierra Nevada de Santa Marta, Colombia

NARCIS (Netherlands)

Reenen, van G.B.A.; Gradstein, S.R.

1983-01-01

Along an altitudinal transect on the northern slope of the Sierra Nevada de Santa Marta, Colombia, 500-4100 m, five altitudinal bryophyte zones are distinguished – four forest zones and one páramo zone – based on ecosystem relevé analysis concerning species presence, substrate preference and

Evaluating rapid ground sampling and scaling estimated plant cover using UAV imagery up to Landsat for mapping arctic vegetation

Science.gov (United States)

Nelson, P.; Paradis, D. P.

2017-12-01

The small stature and spectral diversity of arctic plant taxa presents challenges in mapping arctic vegetation. Mapping vegetation at the appropriate scale is needed to visualize effects of disturbance, directional vegetation change or mapping of specific plant groups for other applications (eg. habitat mapping). Fine spatial grain of remotely sensed data (ca. 10 cm pixels) is often necessary to resolve patches of many arctic plant groups, such as bryophytes and lichens. These groups are also spectrally different from mineral, litter and vascular plants. We sought to explore method to generate high-resolution spatial and spectral data to explore better mapping methods for arctic vegetation. We sampled ground vegetation at seven sites north or west of tree-line in Alaska, four north of Fairbanks and three northwest of Bethel, respectively. At each site, we estimated cover of plant functional types in 1m2 quadrats spaced approximately every 10 m along a 100 m long transect. Each quadrat was also scanned using a field spectroradiometer (PSR+ Spectral Evolution, 400-2500 nm range) and photographed from multiple perspectives. We then flew our small UAV with a RGB camera over the transect and at least 50 m on either side collecting on imagery of the plot, which were used to generate a image mosaic and digital surface model of the plot. We compare plant functional group cover ocular estimated in situ to post-hoc estimation, either automated or using a human observer, using the quadrat photos. We also compare interpolated lichen cover from UAV scenes to estimated lichen cover using a statistical models using Landsat data, with focus on lichens. Light and yellow lichens are discernable in the UAV imagery but certain lichens, especially dark colored lichens or those with spectral signatures similar to graminoid litter, present challenges. Future efforts will focus on integrating UAV-upscaled ground cover estimates to hyperspectral sensors (eg. AVIRIS ng) for better combined