Java for Cost Effective Embedded Real-Time Software

DEFF Research Database (Denmark)

Korsholm, Stephan

This thesis presents the analysis, design and implementation of the Hardware near Virtual Machine (HVM) - a Java virtual machine for embedded devices. The HVM supports the execution of Java programs on low-end embedded hard- ware environments with as little as a few kB of RAM and 32 kB of ROM....... The HVM is based on a Java-to-C translation mechanism and it produces self- contained, strict ANSI-C code that has been specially crafted to allow it to be embedded into existing C based build and execution environments; environ- ments which may be based on non standard C compilers and libraries. The HVM...... does not require a POSIX-like OS, nor does it require a C runtime library to be present for the target. The main distinguishing feature of the HVM is to support the stepwise addition of Java into an existing C based build and execution environment for low-end embedded systems. This will allow...

Using MATLAB software with Tomcat server and Java platform for remote image analysis in pathology.

Science.gov (United States)

Markiewicz, Tomasz

2011-03-30

The Matlab software is a one of the most advanced development tool for application in engineering practice. From our point of view the most important is the image processing toolbox, offering many built-in functions, including mathematical morphology, and implementation of a many artificial neural networks as AI. It is very popular platform for creation of the specialized program for image analysis, also in pathology. Based on the latest version of Matlab Builder Java toolbox, it is possible to create the software, serving as a remote system for image analysis in pathology via internet communication. The internet platform can be realized based on Java Servlet Pages with Tomcat server as servlet container. In presented software implementation we propose remote image analysis realized by Matlab algorithms. These algorithms can be compiled to executable jar file with the help of Matlab Builder Java toolbox. The Matlab function must be declared with the set of input data, output structure with numerical results and Matlab web figure. Any function prepared in that manner can be used as a Java function in Java Servlet Pages (JSP). The graphical user interface providing the input data and displaying the results (also in graphical form) must be implemented in JSP. Additionally the data storage to database can be implemented within algorithm written in Matlab with the help of Matlab Database Toolbox directly with the image processing. The complete JSP page can be run by Tomcat server. The proposed tool for remote image analysis was tested on the Computerized Analysis of Medical Images (CAMI) software developed by author. The user provides image and case information (diagnosis, staining, image parameter etc.). When analysis is initialized, input data with image are sent to servlet on Tomcat. When analysis is done, client obtains the graphical results as an image with marked recognized cells and also the quantitative output. Additionally, the results are stored in a server

Benchmarking JavaScript Frameworks

OpenAIRE

Mariano, Carl Lawrence

2017-01-01

JavaScript programming language has been in existence for many years already and is one of the most widely known, if not, the most used front-end programming language in web development. However, JavaScript is still evolving and with the emergence of JavaScript Frameworks (JSF), there has been a major change in how developers develop software nowadays. Developers these days often use more than one framework in order to fulfil their job which has given rise to the problem for developers when i...

Optimizing memory use in Java applications, garbage collectors

Directory of Open Access Journals (Sweden)

Ştefan PREDA

2016-05-01

Full Text Available Java applications are diverse, depending by use case, exist application that use small amount of memory till application that use huge amount, tens or hundreds of gigabits. Java Virtual Machine is designed to automatically manage memory for applications. Even in this case due diversity of hardware, software that coexist on the same system and applications itself, these automatic decision need to be accompanied by developer or system administrator to triage optimal memory use. After developer big role to write optimum code from memory allocation perspective , optimizing memory use at Java Virtual Machine and application level become in last year's one of the most important task. This is explained in special due increased demand in applications scalability.

Meta-Level Runtime Feature Awareness for Java

DEFF Research Database (Denmark)

Olszak, Andrzej; Jensen, Martin Lykke Rytter; Jørgensen, Bo Nørregaard

2011-01-01

introduce the concept of runtime feature awareness that enables a running program to establish and make use of its own feature-code traceability links. We present an implementation of this idea, a dynamic-analysis Java library called JAwareness. JAwareness provides a meta-level architecture that can be non...

Model Checking Real Time Java Using Java PathFinder

Science.gov (United States)

Lindstrom, Gary; Mehlitz, Peter C.; Visser, Willem

2005-01-01

The Real Time Specification for Java (RTSJ) is an augmentation of Java for real time applications of various degrees of hardness. The central features of RTSJ are real time threads; user defined schedulers; asynchronous events, handlers, and control transfers; a priority inheritance based default scheduler; non-heap memory areas such as immortal and scoped, and non-heap real time threads whose execution is not impeded by garbage collection. The Robust Software Systems group at NASA Ames Research Center has JAVA PATHFINDER (JPF) under development, a Java model checker. JPF at its core is a state exploring JVM which can examine alternative paths in a Java program (e.g., via backtracking) by trying all nondeterministic choices, including thread scheduling order. This paper describes our implementation of an RTSJ profile (subset) in JPF, including requirements, design decisions, and current implementation status. Two examples are analyzed: jobs on a multiprogramming operating system, and a complex resource contention example involving autonomous vehicles crossing an intersection. The utility of JPF in finding logic and timing errors is illustrated, and the remaining challenges in supporting all of RTSJ are assessed.

Formalising the Safety of Java, the Java Virtual Machine and Java Card

OpenAIRE

Hartel, Pieter H.; Moreau, Luc

2001-01-01

We review the existing literature on Java safety, emphasizing formal approaches, and the impact of Java safety on small footprint devices such as smart cards. The conclusion is that while a lot of good work has been done, a more concerted effort is needed to build a coherent set of machine readable formal models of the whole of Java and its implementation. This is a formidable task but we believe it is essential to building trust in Java safety, and thence to achieve ITSEC level 6 or Common C...

Model Checker for Java Programs

Science.gov (United States)

Visser, Willem

2007-01-01

Java Pathfinder (JPF) is a verification and testing environment for Java that integrates model checking, program analysis, and testing. JPF consists of a custom-made Java Virtual Machine (JVM) that interprets bytecode, combined with a search interface to allow the complete behavior of a Java program to be analyzed, including interleavings of concurrent programs. JPF is implemented in Java, and its architecture is highly modular to support rapid prototyping of new features. JPF is an explicit-state model checker, because it enumerates all visited states and, therefore, suffers from the state-explosion problem inherent in analyzing large programs. It is suited to analyzing programs less than 10kLOC, but has been successfully applied to finding errors in concurrent programs up to 100kLOC. When an error is found, a trace from the initial state to the error is produced to guide the debugging. JPF works at the bytecode level, meaning that all of Java can be model-checked. By default, the software checks for all runtime errors (uncaught exceptions), assertions violations (supports Java s assert), and deadlocks. JPF uses garbage collection and symmetry reductions of the heap during model checking to reduce state-explosion, as well as dynamic partial order reductions to lower the number of interleavings analyzed. JPF is capable of symbolic execution of Java programs, including symbolic execution of complex data such as linked lists and trees. JPF is extensible as it allows for the creation of listeners that can subscribe to events during searches. The creation of dedicated code to be executed in place of regular classes is supported and allows users to easily handle native calls and to improve the efficiency of the analysis.

Natural language processing with Java

CERN Document Server

Reese, Richard M

2015-01-01

If you are a Java programmer who wants to learn about the fundamental tasks underlying natural language processing, this book is for you. You will be able to identify and use NLP tasks for many common problems, and integrate them in your applications to solve more difficult problems. Readers should be familiar/experienced with Java software development.

Extending Java for High-Level Web Service Construction

DEFF Research Database (Denmark)

Christensen, Aske Simon; Møller, Anders; Schwartzbach, Michael Ignatieff

2003-01-01

We incorporate innovations from the project into the Java language to provide high-level features for Web service programming. The resulting language, JWIG, contains an advanced session model and a flexible mechanism for dynamic construction of XML documents, in particular XHTML. To support program...

Mastering JavaScript promises

CERN Document Server

Hussain, Muzzamil

2015-01-01

This book is for all the software and web engineers wanting to apply the promises paradigm to their next project and get the best outcome from it. This book also acts as a reference for the engineers who are already using promises in their projects and want to improve their current knowledge to reach the next level. To get the most benefit from this book, you should know basic programming concepts, have a familiarity with JavaScript, and a good understanding of HTML.

Certifiable Java for Embedded Systems

DEFF Research Database (Denmark)

Schoeberl, Martin; Dalsgaard, Andreas Engelbredt; Hansen, Rene Rydhof

2014-01-01

The Certifiable Java for Embedded Systems (CJ4ES) project aimed to develop a prototype development environment and platform for safety-critical software for embedded applications. There are three core constituents: A profile of the Java programming language that is tailored for safety......-critical applications, a predictable Java processor built with FPGA technology, and an Eclipse based application development environment that binds the profile and the platform together and provides analyses that help to provide evidence that can be used as part of a safety case. This paper summarizes key contributions...

High-Performance Java Codes for Computational Fluid Dynamics

Science.gov (United States)

Riley, Christopher; Chatterjee, Siddhartha; Biswas, Rupak; Biegel, Bryan (Technical Monitor)

2001-01-01

The computational science community is reluctant to write large-scale computationally -intensive applications in Java due to concerns over Java's poor performance, despite the claimed software engineering advantages of its object-oriented features. Naive Java implementations of numerical algorithms can perform poorly compared to corresponding Fortran or C implementations. To achieve high performance, Java applications must be designed with good performance as a primary goal. This paper presents the object-oriented design and implementation of two real-world applications from the field of Computational Fluid Dynamics (CFD): a finite-volume fluid flow solver (LAURA, from NASA Langley Research Center), and an unstructured mesh adaptation algorithm (2D_TAG, from NASA Ames Research Center). This work builds on our previous experience with the design of high-performance numerical libraries in Java. We examine the performance of the applications using the currently available Java infrastructure and show that the Java version of the flow solver LAURA performs almost within a factor of 2 of the original procedural version. Our Java version of the mesh adaptation algorithm 2D_TAG performs within a factor of 1.5 of its original procedural version on certain platforms. Our results demonstrate that object-oriented software design principles are not necessarily inimical to high performance.

Distributed nuclear medicine applications using World Wide Web and Java technology

International Nuclear Information System (INIS)

Knoll, P.; Hoell, K.; Koriska, K.; Mirzaei, S.; Koehn, H.

2000-01-01

At present, medical applications applying World Wide Web (WWW) technology are mainly used to view static images and to retrieve some information. The Java platform is a relative new way of computing, especially designed for network computing and distributed applications which enables interactive connection between user and information via the WWW. The Java 2 Software Development Kit (SDK) including Java2D API, Java Remote Method Invocation (RMI) technology, Object Serialization and the Java Advanced Imaging (JAI) extension was used to achieve a robust, platform independent and network centric solution. Medical image processing software based on this technology is presented and adequate performance capability of Java is demonstrated by an iterative reconstruction algorithm for single photon emission computerized tomography (SPECT). (orig.)

New Web Server - the Java Version of Tempest - Produced

Science.gov (United States)

York, David W.; Ponyik, Joseph G.

2000-01-01

A new software design and development effort has produced a Java (Sun Microsystems, Inc.) version of the award-winning Tempest software (refs. 1 and 2). In 1999, the Embedded Web Technology (EWT) team received a prestigious R&D 100 Award for Tempest, Java Version. In this article, "Tempest" will refer to the Java version of Tempest, a World Wide Web server for desktop or embedded systems. Tempest was designed at the NASA Glenn Research Center at Lewis Field to run on any platform for which a Java Virtual Machine (JVM, Sun Microsystems, Inc.) exists. The JVM acts as a translator between the native code of the platform and the byte code of Tempest, which is compiled in Java. These byte code files are Java executables with a ".class" extension. Multiple byte code files can be zipped together as a "*.jar" file for more efficient transmission over the Internet. Today's popular browsers, such as Netscape (Netscape Communications Corporation) and Internet Explorer (Microsoft Corporation) have built-in Virtual Machines to display Java applets.

CGI: Java software for mapping and visualizing data from array-based comparative genomic hybridization and expression profiling.

Science.gov (United States)

Gu, Joyce Xiuweu-Xu; Wei, Michael Yang; Rao, Pulivarthi H; Lau, Ching C; Behl, Sanjiv; Man, Tsz-Kwong

2007-10-06

With the increasing application of various genomic technologies in biomedical research, there is a need to integrate these data to correlate candidate genes/regions that are identified by different genomic platforms. Although there are tools that can analyze data from individual platforms, essential software for integration of genomic data is still lacking. Here, we present a novel Java-based program called CGI (Cytogenetics-Genomics Integrator) that matches the BAC clones from array-based comparative genomic hybridization (aCGH) to genes from RNA expression profiling datasets. The matching is computed via a fast, backend MySQL database containing UCSC Genome Browser annotations. This program also provides an easy-to-use graphical user interface for visualizing and summarizing the correlation of DNA copy number changes and RNA expression patterns from a set of experiments. In addition, CGI uses a Java applet to display the copy number values of a specific BAC clone in aCGH experiments side by side with the expression levels of genes that are mapped back to that BAC clone from the microarray experiments. The CGI program is built on top of extensible, reusable graphic components specifically designed for biologists. It is cross-platform compatible and the source code is freely available under the General Public License.

CGI: Java Software for Mapping and Visualizing Data from Array-based Comparative Genomic Hybridization and Expression Profiling

Directory of Open Access Journals (Sweden)

Joyce Xiuweu-Xu Gu

2007-01-01

Full Text Available With the increasing application of various genomic technologies in biomedical research, there is a need to integrate these data to correlate candidate genes/regions that are identified by different genomic platforms. Although there are tools that can analyze data from individual platforms, essential software for integration of genomic data is still lacking. Here, we present a novel Java-based program called CGI (Cytogenetics-Genomics Integrator that matches the BAC clones from array-based comparative genomic hybridization (aCGH to genes from RNA expression profiling datasets. The matching is computed via a fast, backend MySQL database containing UCSC Genome Browser annotations. This program also provides an easy-to-use graphical user interface for visualizing and summarizing the correlation of DNA copy number changes and RNA expression patterns from a set of experiments. In addition, CGI uses a Java applet to display the copy number values of a specifi c BAC clone in aCGH experiments side by side with the expression levels of genes that are mapped back to that BAC clone from the microarray experiments. The CGI program is built on top of extensible, reusable graphic components specifically designed for biologists. It is cross-platform compatible and the source code is freely available under the General Public License.

Translating Colored Control Flow Nets into Readable Java via Annotated Java Workflow Nets

DEFF Research Database (Denmark)

Lassen, Kristian Bisgaard; Tjell, Simon

2007-01-01

In this paper, we present a method for developing Java applications from Colored Control Flow Nets (CCFNs), which is a special kind of Colored Petri Nets (CPNs) that we introduce. CCFN makes an explicit distinction between the representation of: The system, the environment of the system, and the ......In this paper, we present a method for developing Java applications from Colored Control Flow Nets (CCFNs), which is a special kind of Colored Petri Nets (CPNs) that we introduce. CCFN makes an explicit distinction between the representation of: The system, the environment of the system......, and the interface between the system and the environment. Our translation maps CCFNs into Anno- tated Java Workflow Nets (AJWNs) as an intermediate step, and these AJWNs are finally mapped to Java. CCFN is intended to enforce the modeler to describe the system in an imperative manner which makes the subsequent...... translation to Java easier to define. The translation to Java preserves data dependencies and control-flow aspects of the source CCFN. This paper contributes to the model-driven software development paradigm, by showing how to model a system, environment, and their interface, as a CCFN and presenting a fully...

Developing a java android application of KMV-Merton default rate model

Science.gov (United States)

Yusof, Norliza Muhamad; Anuar, Aini Hayati; Isa, Norsyaheeda Natasha; Zulkafli, Sharifah Nursyuhada Syed; Sapini, Muhamad Luqman

2017-11-01

This paper presents a developed java android application for KMV-Merton model in predicting the defaut rate of a firm. Predicting default rate is essential in the risk management area as default risk can be immediately transmitted from one entity to another entity. This is the reason default risk is known as a global risk. Although there are several efforts, instruments and methods used to manage the risk, it is said to be insufficient. To the best of our knowledge, there has been limited innovation in developing the default risk mathematical model into a mobile application. Therefore, through this study, default risk is predicted quantitatively using the KMV-Merton model. The KMV-Merton model has been integrated in the form of java program using the Android Studio Software. The developed java android application is tested by predicting the levels of default risk of the three different rated companies. It is found that the levels of default risk are equivalent to the ratings of the respective companies. This shows that the default rate predicted by the KMV-Merton model using the developed java android application can be a significant tool to the risk mangement field. The developed java android application grants users an alternative to predict level of default risk within less procedure.

JAVA PathFinder

Science.gov (United States)

Mehhtz, Peter

2005-01-01

JPF is an explicit state software model checker for Java bytecode. Today, JPF is a swiss army knife for all sort of runtime based verification purposes. This basically means JPF is a Java virtual machine that executes your program not just once (like a normal VM), but theoretically in all possible ways, checking for property violations like deadlocks or unhandled exceptions along all potential execution paths. If it finds an error, JPF reports the whole execution that leads to it. Unlike a normal debugger, JPF keeps track of every step how it got to the defect.

Java EE 7 handbook

CERN Document Server

Pilgrim, Peter A

2013-01-01

Java EE 7 Handbook is an example based tutorial with descriptions and explanations.""Java EE 7 Handbook"" is for the developer, designer, and architect aiming to get acquainted with the Java EE platform in its newest edition. This guide will enhance your knowledge about the Java EE 7 platform. Whether you are a long-term Java EE (J2EE) developer or an intermediate level engineer on the JVM with just Java SE behind you, this handbook is for you, the new contemporary Java EE 7 developer!

The Organisation and Rationalisation of Java Based Applications in the BDI Group

CERN Document Server

Jackson, S; CERN. Geneva. AB Department

2005-01-01

The AB/BDI software section is responsible for providing all the software necessary to develop, test, diagnose and maintain the different instruments produced by the group. Almost all graphical user interface applications produced by the group are written in Java and the Java Web Start architecture is used to launch these applications. Java Web Start provides a solid basis for application deployment, but lacks several key features essential for ensuring a proper and easily manageable working environment. This note describes an internally developed tool, which extends the Java Web Start functionality in order to provide these missing features.

A Java class library for accessing Cadplan data

International Nuclear Information System (INIS)

Zagler, Norbert

2008-01-01

A Java class library was developed to be able to access the data of the treatment planning system Varian Cadplan which was decommissioned in 2005. The library reads and encapsulates the most important patient data. It facilitates creating viewing software for CT slices, contours and isodoses. Keeping alive old Cadplan hardware is no longer necessary. The files can be stored on any server in the network of a department and they can be accessed from any workstation capable of running Java software. (orig.)

Monitoring Java Programs with Java PathExplorer

Science.gov (United States)

Havelund, Klaus; Rosu, Grigore; Clancy, Daniel (Technical Monitor)

2001-01-01

We present recent work on the development Java PathExplorer (JPAX), a tool for monitoring the execution of Java programs. JPAX can be used during program testing to gain increased information about program executions, and can potentially furthermore be applied during operation to survey safety critical systems. The tool facilitates automated instrumentation of a program's late code which will then omit events to an observer during its execution. The observer checks the events against user provided high level requirement specifications, for example temporal logic formulae, and against lower level error detection procedures, for example concurrency related such as deadlock and data race algorithms. High level requirement specifications together with their underlying logics are defined in the Maude rewriting logic, and then can either be directly checked using the Maude rewriting engine, or be first translated to efficient data structures and then checked in Java.

An evaluation of safety-critical Java on a Java processor

DEFF Research Database (Denmark)

Rios Rivas, Juan Ricardo; Schoeberl, Martin

2014-01-01

The safety-critical Java (SCJ) specification provides a restricted set of the Java language intended for applications that require certification. In order to test the specification, implementations are emerging and the need to evaluate those implementations in a systematic way is becoming important....... In this paper we evaluate our SCJ implementation which is based on the Java Optimized Processor JOP and we measure different performance and timeliness criteria relevant to hard real-time systems. Our implementation targets Level 0 and Level1 of the specification and to test it we use a series of micro...

Java Source Code Analysis for API Migration to Embedded Systems

Energy Technology Data Exchange (ETDEWEB)

Winter, Victor [Univ. of Nebraska, Omaha, NE (United States); McCoy, James A. [Sandia National Lab. (SNL-NM), Albuquerque, NM (United States); Guerrero, Jonathan [Univ. of Nebraska, Omaha, NE (United States); Reinke, Carl Werner [Sandia National Lab. (SNL-NM), Albuquerque, NM (United States); Perry, James Thomas [Sandia National Lab. (SNL-NM), Albuquerque, NM (United States)

2015-02-01

Embedded systems form an integral part of our technological infrastructure and oftentimes play a complex and critical role within larger systems. From the perspective of reliability, security, and safety, strong arguments can be made favoring the use of Java over C in such systems. In part, this argument is based on the assumption that suitable subsets of Java’s APIs and extension libraries are available to embedded software developers. In practice, a number of Java-based embedded processors do not support the full features of the JVM. For such processors, source code migration is a mechanism by which key abstractions offered by APIs and extension libraries can made available to embedded software developers. The analysis required for Java source code-level library migration is based on the ability to correctly resolve element references to their corresponding element declarations. A key challenge in this setting is how to perform analysis for incomplete source-code bases (e.g., subsets of libraries) from which types and packages have been omitted. This article formalizes an approach that can be used to extend code bases targeted for migration in such a manner that the threats associated the analysis of incomplete code bases are eliminated.

Java SOA Cookbook

CERN Document Server

Hewitt, Eben

2009-01-01

Java SOA Cookbook offers practical solutions and advice to programmers charged with implementing a service-oriented architecture (SOA) in their organization. Instead of providing another conceptual, high-level view of SOA, this cookbook shows you how to make SOA work. It's full of Java and XML code you can insert directly into your applications and recipes you can apply right away. The book focuses primarily on the use of free and open source Java Web Services technologies -- including Java SE 6 and Java EE 5 tools -- but you'll find tips for using commercially available tools as well. Jav

Java expert GUI framework for CERN beam instrumentation systems

International Nuclear Information System (INIS)

Bart Pedersen, S.; Bozyigit, S.; Jackson, S.

2012-01-01

The CERN Beam Instrumentation Group's software section has recently performed a study of the tools used to produce Java expert GUI (Graphical User Interface) applications. This paper will present the analysis that was made to understand the requirements for generic components and the resulting tools including a collection of Java components that have been made available for a wider audience. The new expert GUI has already given very good results. Users can easily and quickly create a Java project with a pre-defined structure that will allow them to run an application in two mouse clicks. At the same time, they are able to add whatever components they need to libraries that are now common to all. The use of Maven is not completed and has led to some integration problems for our Java software architecture. Nevertheless, the handling of the library dependencies and the archetypes are very useful

Database Access through Java Technologies

Directory of Open Access Journals (Sweden)

Nicolae MERCIOIU

2010-09-01

Full Text Available As a high level development environment, the Java technologies offer support to the development of distributed applications, independent of the platform, providing a robust set of methods to access the databases, used to create software components on the server side, as well as on the client side. Analyzing the evolution of Java tools to access data, we notice that these tools evolved from simple methods that permitted the queries, the insertion, the update and the deletion of the data to advanced implementations such as distributed transactions, cursors and batch files. The client-server architectures allows through JDBC (the Java Database Connectivity the execution of SQL (Structured Query Language instructions and the manipulation of the results in an independent and consistent manner. The JDBC API (Application Programming Interface creates the level of abstractization needed to allow the call of SQL queries to any DBMS (Database Management System. In JDBC the native driver and the ODBC (Open Database Connectivity-JDBC bridge and the classes and interfaces of the JDBC API will be described. The four steps needed to build a JDBC driven application are presented briefly, emphasizing on the way each step has to be accomplished and the expected results. In each step there are evaluations on the characteristics of the database systems and the way the JDBC programming interface adapts to each one. The data types provided by SQL2 and SQL3 standards are analyzed by comparison with the Java data types, emphasizing on the discrepancies between those and the SQL types, but also the methods that allow the conversion between different types of data through the methods of the ResultSet object. Next, starting from the metadata role and studying the Java programming interfaces that allow the query of result sets, we will describe the advanced features of the data mining with JDBC. As alternative to result sets, the Rowsets add new functionalities that

ELIST8: simulating military deployments in Java

International Nuclear Information System (INIS)

Van Groningen, C. N.; Blachowicz, D.; Braun, M. D.; Simunich, K. L.; Widing, M. A.

2002-01-01

Planning for the transportation of large amounts of equipment, troops, and supplies presents a complex problem. Many options, including modes of transportation, vehicles, facilities, routes, and timing, must be considered. The amount of data involved in generating and analyzing a course of action (e.g., detailed information about military units, logistical infrastructures, and vehicles) is enormous. Software tools are critical in defining and analyzing these plans. Argonne National Laboratory has developed ELIST (Enhanced Logistics Intra-theater Support Tool), a simulation-based decision support system, to assist military planners in determining the logistical feasibility of an intra-theater course of action. The current version of ELIST (v.8) contains a discrete event simulation developed using the Java programming language. Argonne selected Java because of its object-oriented framework, which has greatly facilitated entity and process development within the simulation, and because it fulfills a primary requirement for multi-platform execution. This paper describes the model, including setup and analysis, a high-level architectural design, and an evaluation of Java

QSPIN: A High Level Java API for Quantum Computing Experimentation

Science.gov (United States)

Barth, Tim

2017-01-01

QSPIN is a high level Java language API for experimentation in QC models used in the calculation of Ising spin glass ground states and related quadratic unconstrained binary optimization (QUBO) problems. The Java API is intended to facilitate research in advanced QC algorithms such as hybrid quantum-classical solvers, automatic selection of constraint and optimization parameters, and techniques for the correction and mitigation of model and solution errors. QSPIN includes high level solver objects tailored to the D-Wave quantum annealing architecture that implement hybrid quantum-classical algorithms [Booth et al.] for solving large problems on small quantum devices, elimination of variables via roof duality, and classical computing optimization methods such as GPU accelerated simulated annealing and tabu search for comparison. A test suite of documented NP-complete applications ranging from graph coloring, covering, and partitioning to integer programming and scheduling are provided to demonstrate current capabilities.

Java-Based Coupling for Parallel Predictive-Adaptive Domain Decomposition

Directory of Open Access Journals (Sweden)

Cécile Germain‐Renaud

1999-01-01

Full Text Available Adaptive domain decomposition exemplifies the problem of integrating heterogeneous software components with intermediate coupling granularity. This paper describes an experiment where a data‐parallel (HPF client interfaces with a sequential computation server through Java. We show that seamless integration of data‐parallelism is possible, but requires most of the tools from the Java palette: Java Native Interface (JNI, Remote Method Invocation (RMI, callbacks and threads.

Professionell entwickeln mit Java EE 7 das umfassende Handbuch

CERN Document Server

Salvanos, Alexander

2014-01-01

Ein praxisorientiertes Lehrbuch zur JEE 7 und zugleich ein Standardwerk, das Sie auf Ihrem Weg zum Enterprise-Entwickler begleitet. Inklusive Best Practices für leichtgewichtige Enterprise Applications, Standards zu servicebasierten Anwendungen, Persistence API, Dependency Injection, HTML5 und Performance-Tuning. Aus dem Inhalt: Grundlagen und Installation Software-Architektur mit Java EE Webanwendungen mit HTML5 und CSS3 Java Standard Tag Library Asynchrone Servlets und Non-blocking I/O Datenbanken anbinden mit der JDBC API Java Server Faces Datenbank-Organisation Java Persistence API Objektrelationales Mapping Transaktionssicherheit Performance-Tuning Internationalisierung Enterprise Java Beans WebSockets PrimeFaces Deployment Galileo Press heißt von jetzt an Rheinwerk Verlag.

Distributed, Embedded and Real-time Java Systems

CERN Document Server

Wellings, Andy

2012-01-01

Research on real-time Java technology has been prolific over the past decade, leading to a large number of corresponding hardware and software solutions, and frameworks for distributed and embedded real-time Java systems.  This book is aimed primarily at researchers in real-time embedded systems, particularly those who wish to understand the current state of the art in using Java in this domain.  Much of the work in real-time distributed, embedded and real-time Java has focused on the Real-time Specification for Java (RTSJ) as the underlying base technology, and consequently many of the Chapters in this book address issues with, or solve problems using, this framework. Describes innovative techniques in: scheduling, memory management, quality of service and communication systems supporting real-time Java applications; Includes coverage of multiprocessor embedded systems and parallel programming; Discusses state-of-the-art resource management for embedded systems, including Java’s real-time garbage collect...

Sequence alignment visualization in HTML5 without Java.

Science.gov (United States)

Gille, Christoph; Birgit, Weyand; Gille, Andreas

2014-01-01

Java has been extensively used for the visualization of biological data in the web. However, the Java runtime environment is an additional layer of software with an own set of technical problems and security risks. HTML in its new version 5 provides features that for some tasks may render Java unnecessary. Alignment-To-HTML is the first HTML-based interactive visualization for annotated multiple sequence alignments. The server side script interpreter can perform all tasks like (i) sequence retrieval, (ii) alignment computation, (iii) rendering, (iv) identification of a homologous structural models and (v) communication with BioDAS-servers. The rendered alignment can be included in web pages and is displayed in all browsers on all platforms including touch screen tablets. The functionality of the user interface is similar to legacy Java applets and includes color schemes, highlighting of conserved and variable alignment positions, row reordering by drag and drop, interlinked 3D visualization and sequence groups. Novel features are (i) support for multiple overlapping residue annotations, such as chemical modifications, single nucleotide polymorphisms and mutations, (ii) mechanisms to quickly hide residue annotations, (iii) export to MS-Word and (iv) sequence icons. Alignment-To-HTML, the first interactive alignment visualization that runs in web browsers without additional software, confirms that to some extend HTML5 is already sufficient to display complex biological data. The low speed at which programs are executed in browsers is still the main obstacle. Nevertheless, we envision an increased use of HTML and JavaScript for interactive biological software. Under GPL at: http://www.bioinformatics.org/strap/toHTML/.

CERN Technical Training 2006: Software and System Technologies Curriculum - Scheduled

CERN Multimedia

2006-01-01

Course Sessions (October 2006-March 2007) The Software and System Technologies Curriculum of the CERN Technical Training Programme offers comprehensive training in C++, Java, Perl, Python, XML, OO programming, JCOP/PVSS, database design and Oracle. In the PERL, C++, OO and Java course series there are some places available on the following course sessions, currently scheduled until March 2007: Object-Oriented Analysis and Design using UML: 17-19 October 2006 (3 days) JAVA 2 Enterprise Edition - Part 1: Web Applications: 19-20 October 2006 (2 days) JAVA - Level 1: 30 October -1 November 2006 (3 days) PERL 5 - Advanced Aspects: 2 November 2006 (1 day) C++ Programming Part 1 - Introduction to Object-Oriented Design and Programming: 14-16 November 2006 (3 days) JAVA - Level 2: 4-7 December 2006 (4 days) C++ Programming Part 2 - Advanced C++ and its Traps and Pitfalls: 12-15 December 2006 (4 days) JAVA 2 Enterprise Edition - Part 2: Enterprise JavaBeans: 18-20 December 2006 (3 days) C++ for Particle Physicists:...

Hardware Objects for Java

DEFF Research Database (Denmark)

Schoeberl, Martin; Thalinger, Christian; Korsholm, Stephan

2008-01-01

Java, as a safe and platform independent language, avoids access to low-level I/O devices or direct memory access. In standard Java, low-level I/O it not a concern; it is handled by the operating system. However, in the embedded domain resources are scarce and a Java virtual machine (JVM) without...... an underlying middleware is an attractive architecture. When running the JVM on bare metal, we need access to I/O devices from Java; therefore we investigate a safe and efficient mechanism to represent I/O devices as first class Java objects, where device registers are represented by object fields. Access...... to those registers is safe as Java’s type system regulates it. The access is also fast as it is directly performed by the bytecodes getfield and putfield. Hardware objects thus provide an object-oriented abstraction of low-level hardware devices. As a proof of concept, we have implemented hardware objects...

Using Java for distributed computing in the Gaia satellite data processing

Science.gov (United States)

O'Mullane, William; Luri, Xavier; Parsons, Paul; Lammers, Uwe; Hoar, John; Hernandez, Jose

2011-10-01

In recent years Java has matured to a stable easy-to-use language with the flexibility of an interpreter (for reflection etc.) but the performance and type checking of a compiled language. When we started using Java for astronomical applications around 1999 they were the first of their kind in astronomy. Now a great deal of astronomy software is written in Java as are many business applications. We discuss the current environment and trends concerning the language and present an actual example of scientific use of Java for high-performance distributed computing: ESA's mission Gaia. The Gaia scanning satellite will perform a galactic census of about 1,000 million objects in our galaxy. The Gaia community has chosen to write its processing software in Java. We explore the manifold reasons for choosing Java for this large science collaboration. Gaia processing is numerically complex but highly distributable, some parts being embarrassingly parallel. We describe the Gaia processing architecture and its realisation in Java. We delve into the astrometric solution which is the most advanced and most complex part of the processing. The Gaia simulator is also written in Java and is the most mature code in the system. This has been successfully running since about 2005 on the supercomputer "Marenostrum" in Barcelona. We relate experiences of using Java on a large shared machine. Finally we discuss Java, including some of its problems, for scientific computing.

Multibiodose radiation emergency triage categorization software.

Science.gov (United States)

Ainsbury, Elizabeth A; Barnard, Stephen; Barrios, Lleonard; Fattibene, Paola; de Gelder, Virginie; Gregoire, Eric; Lindholm, Carita; Lloyd, David; Nergaard, Inger; Rothkamm, Kai; Romm, Horst; Scherthan, Harry; Thierens, Hubert; Vandevoorde, Charlot; Woda, Clemens; Wojcik, Andrzej

2014-07-01

In this note, the authors describe the MULTIBIODOSE software, which has been created as part of the MULTIBIODOSE project. The software enables doses estimated by networks of laboratories, using up to five retrospective (biological and physical) assays, to be combined to give a single estimate of triage category for each individual potentially exposed to ionizing radiation in a large scale radiation accident or incident. The MULTIBIODOSE software has been created in Java. The usage of the software is based on the MULTIBIODOSE Guidance: the program creates a link to a single SQLite database for each incident, and the database is administered by the lead laboratory. The software has been tested with Java runtime environment 6 and 7 on a number of different Windows, Mac, and Linux systems, using data from a recent intercomparison exercise. The Java program MULTIBIODOSE_1.0.jar is freely available to download from http://www.multibiodose.eu/software or by contacting the software administrator: MULTIBIODOSE-software@gmx.com.

Java and its future in biomedical computing.

Science.gov (United States)

Rodgers, R P

1996-01-01

Java, a new object-oriented computing language related to C++, is receiving considerable attention due to its use in creating network-sharable, platform-independent software modules (known as "applets") that can be used with the World Wide Web. The Web has rapidly become the most commonly used information-retrieval tool associated with the global computer network known as the Internet, and Java has the potential to further accelerate the Web's application to medical problems. Java's potentially wide acceptance due to its Web association and its own technical merits also suggests that it may become a popular language for non-Web-based, object-oriented computing. PMID:8880677

JavaScript: Convenient Interactivity for the Class Web Page.

Science.gov (United States)

Gray, Patricia

This paper shows how JavaScript can be used within HTML pages to add interactive review sessions and quizzes incorporating graphics and sound files. JavaScript has the advantage of providing basic interactive functions without the use of separate software applications and players. Because it can be part of a standard HTML page, it is…

Infrastructure for Rapid Development of Java GUI Programs

Science.gov (United States)

Jones, Jeremy; Hostetter, Carl F.; Wheeler, Philip

2006-01-01

The Java Application Shell (JAS) is a software framework that accelerates the development of Java graphical-user-interface (GUI) application programs by enabling the reuse of common, proven GUI elements, as distinguished from writing custom code for GUI elements. JAS is a software infrastructure upon which Java interactive application programs and graphical user interfaces (GUIs) for those programs can be built as sets of plug-ins. JAS provides an application- programming interface that is extensible by application-specific plugins that describe and encapsulate both specifications of a GUI and application-specific functionality tied to the specified GUI elements. The desired GUI elements are specified in Extensible Markup Language (XML) descriptions instead of in compiled code. JAS reads and interprets these descriptions, then creates and configures a corresponding GUI from a standard set of generic, reusable GUI elements. These elements are then attached (again, according to the XML descriptions) to application-specific compiled code and scripts. An application program constructed by use of JAS as its core can be extended by writing new plug-ins and replacing existing plug-ins. Thus, JAS solves many problems that Java programmers generally solve anew for each project, thereby reducing development and testing time.

Java Application Shell: A Framework for Piecing Together Java Applications

Science.gov (United States)

Miller, Philip; Powers, Edward I. (Technical Monitor)

2001-01-01

This session describes the architecture of Java Application Shell (JAS), a Swing-based framework for developing interactive Java applications. Java Application Shell is being developed by Commerce One, Inc. for NASA Goddard Space Flight Center Code 588. The purpose of JAS is to provide a framework for the development of Java applications, providing features that enable the development process to be more efficient, consistent and flexible. Fundamentally, JAS is based upon an architecture where an application is considered a collection of 'plugins'. In turn, a plug-in is a collection of Swing actions defined using XML and packaged in a jar file. Plug-ins may be local to the host platform or remotely-accessible through HTTP. Local and remote plugins are automatically discovered by JAS upon application startup; plugins may also be loaded dynamically without having to re-start the application. Using Extensible Markup Language (XML) to define actions, as opposed to hardcoding them in application logic, allows easier customization of application-specific operations by separating application logic from presentation. Through XML, a developer defines an action that may appear on any number of menus, toolbars, and buttons. Actions maintain and propagate enable/disable states and specify icons, tool-tips, titles, etc. Furthermore, JAS allows actions to be implemented using various scripting languages through the use of IBM's Bean Scripting Framework. Scripted action implementation is seamless to the end-user. In addition to action implementation, scripts may be used for application and unit-level testing. In the case of application-level testing, JAS has hooks to assist a script in simulating end-user input. JAS also provides property and user preference management, JavaHelp, Undo/Redo, Multi-Document Interface, Single-Document Interface, printing, and logging. Finally, Jini technology has also been included into the framework by means of a Jini services browser and the

Attribute Cafe: A Java/COBRA Technology Experiment

National Research Council Canada - National Science Library

Toh, T

1998-01-01

.... The experiment focused on the use of Java and Common Object Request Broker (CORBA) technologies as used in the development of a software visualization demonstrator application (the Attribute Cafe...

Component-Based Java Legacy Code Refactoring

Directory of Open Access Journals (Sweden)

Hugo Arboleda

2013-01-01

Full Text Available La Ingeniería de Software Basada en Componentes (CBSE pretende mejorar la modularización del software y la inserción de preocupaciones arquitecturales. Refactorizar código Java legado con CBSE en mente requiere evaluar primero el cumplimiento del código legado con los principios de la programación por componentes. En este artículo presentamos un portafolio de reglas para evaluar el cumplimiento de la propiedad de Integridad de Comunicación en código Java legado; esta propiedad es una de las mayores fortalezas del enfoque CBSE. Proponemos estas reglas para identificar tipos componente y así proveer una medida de la construcción de componentes CBSE de una aplicación. Con el objetivo de ayudar a los desarrolladores y al personal responsable del mantenimiento de código legado cuando se hace necesario refactorizar sus aplicaciones, nuestro trabajo nos lleva a definir un conjunto de acciones de refactorización. En este artículo también presentamos resultados de pruebas, comparaciones y análisis de las salidas logradas luego de refactorizar varias aplicaciones Java.

MATLAB-Like Scripting of Java Scientific Libraries in ScalaLab

Directory of Open Access Journals (Sweden)

Stergios Papadimitriou

2014-01-01

Full Text Available Although there are a lot of robust and effective scientific libraries in Java, the utilization of these libraries in pure Java is difficult and cumbersome, especially for the average scientist that does not expertise in software development. We illustrate that ScalaLab presents an easier and productive MATLAB like front end. Also, the main strengths and weaknesses of the core Java libraries of ScalaLab are elaborated. Since performance is of paramount importance for scientific computation, the article discusses extensively performance aspects of the ScalaLab environment. Also, Java bytecode performance is compared to native code.

MSAViewer: interactive JavaScript visualization of multiple sequence alignments.

Science.gov (United States)

Yachdav, Guy; Wilzbach, Sebastian; Rauscher, Benedikt; Sheridan, Robert; Sillitoe, Ian; Procter, James; Lewis, Suzanna E; Rost, Burkhard; Goldberg, Tatyana

2016-11-15

The MSAViewer is a quick and easy visualization and analysis JavaScript component for Multiple Sequence Alignment data of any size. Core features include interactive navigation through the alignment, application of popular color schemes, sorting, selecting and filtering. The MSAViewer is 'web ready': written entirely in JavaScript, compatible with modern web browsers and does not require any specialized software. The MSAViewer is part of the BioJS collection of components. The MSAViewer is released as open source software under the Boost Software License 1.0. Documentation, source code and the viewer are available at http://msa.biojs.net/Supplementary information: Supplementary data are available at Bioinformatics online. msa@bio.sh. © The Author 2016. Published by Oxford University Press.

JIP: Java image processing on the Internet

Science.gov (United States)

Wang, Dongyan; Lin, Bo; Zhang, Jun

1998-12-01

In this paper, we present JIP - Java Image Processing on the Internet, a new Internet based application for remote education and software presentation. JIP offers an integrate learning environment on the Internet where remote users not only can share static HTML documents and lectures notes, but also can run and reuse dynamic distributed software components, without having the source code or any extra work of software compilation, installation and configuration. By implementing a platform-independent distributed computational model, local computational resources are consumed instead of the resources on a central server. As an extended Java applet, JIP allows users to selected local image files on their computers or specify any image on the Internet using an URL as input. Multimedia lectures such as streaming video/audio and digital images are integrated into JIP and intelligently associated with specific image processing functions. Watching demonstrations an practicing the functions with user-selected input data dramatically encourages leaning interest, while promoting the understanding of image processing theory. The JIP framework can be easily applied to other subjects in education or software presentation, such as digital signal processing, business, mathematics, physics, or other areas such as employee training and charged software consumption.

WCET Analysis of Java Bytecode Featuring Common Execution Environments

DEFF Research Database (Denmark)

Luckow, Kasper Søe; Thomsen, Bent; Frost, Christian

2011-01-01

We present a novel tool for statically determining the Worst Case Execution Time (WCET) of Java Bytecode-based programs called Tool for Execution Time Analysis of Java bytecode (TetaJ). This tool differentiates itself from existing tools by separating the individual constituents of the execution...... environment into independent components. The prime benefit is that it can be used for execution environments featuring common embedded processors and software implementations of the JVM. TetaJ employs a model checking approach for statically determining WCET where the Java program, the JVM, and the hardware...

RED: A Java-MySQL Software for Identifying and Visualizing RNA Editing Sites Using Rule-Based and Statistical Filters.

Directory of Open Access Journals (Sweden)

Yongmei Sun

Full Text Available RNA editing is one of the post- or co-transcriptional processes that can lead to amino acid substitutions in protein sequences, alternative pre-mRNA splicing, and changes in gene expression levels. Although several methods have been suggested to identify RNA editing sites, there remains challenges to be addressed in distinguishing true RNA editing sites from its counterparts on genome and technical artifacts. In addition, there lacks a software framework to identify and visualize potential RNA editing sites. Here, we presented a software - 'RED' (RNA Editing sites Detector - for the identification of RNA editing sites by integrating multiple rule-based and statistical filters. The potential RNA editing sites can be visualized at the genome and the site levels by graphical user interface (GUI. To improve performance, we used MySQL database management system (DBMS for high-throughput data storage and query. We demonstrated the validity and utility of RED by identifying the presence and absence of C→U RNA-editing sites experimentally validated, in comparison with REDItools, a command line tool to perform high-throughput investigation of RNA editing. In an analysis of a sample data-set with 28 experimentally validated C→U RNA editing sites, RED had sensitivity and specificity of 0.64 and 0.5. In comparison, REDItools had a better sensitivity (0.75 but similar specificity (0.5. RED is an easy-to-use, platform-independent Java-based software, and can be applied to RNA-seq data without or with DNA sequencing data. The package is freely available under the GPLv3 license at http://github.com/REDetector/RED or https://sourceforge.net/projects/redetector.

RED: A Java-MySQL Software for Identifying and Visualizing RNA Editing Sites Using Rule-Based and Statistical Filters.

Science.gov (United States)

Sun, Yongmei; Li, Xing; Wu, Di; Pan, Qi; Ji, Yuefeng; Ren, Hong; Ding, Keyue

2016-01-01

RNA editing is one of the post- or co-transcriptional processes that can lead to amino acid substitutions in protein sequences, alternative pre-mRNA splicing, and changes in gene expression levels. Although several methods have been suggested to identify RNA editing sites, there remains challenges to be addressed in distinguishing true RNA editing sites from its counterparts on genome and technical artifacts. In addition, there lacks a software framework to identify and visualize potential RNA editing sites. Here, we presented a software - 'RED' (RNA Editing sites Detector) - for the identification of RNA editing sites by integrating multiple rule-based and statistical filters. The potential RNA editing sites can be visualized at the genome and the site levels by graphical user interface (GUI). To improve performance, we used MySQL database management system (DBMS) for high-throughput data storage and query. We demonstrated the validity and utility of RED by identifying the presence and absence of C→U RNA-editing sites experimentally validated, in comparison with REDItools, a command line tool to perform high-throughput investigation of RNA editing. In an analysis of a sample data-set with 28 experimentally validated C→U RNA editing sites, RED had sensitivity and specificity of 0.64 and 0.5. In comparison, REDItools had a better sensitivity (0.75) but similar specificity (0.5). RED is an easy-to-use, platform-independent Java-based software, and can be applied to RNA-seq data without or with DNA sequencing data. The package is freely available under the GPLv3 license at http://github.com/REDetector/RED or https://sourceforge.net/projects/redetector.

Real-world Bluetooth MANET Java Middleware

DEFF Research Database (Denmark)

Glenstrup, Arne John; Nielsen, Michael; Skytte, Frederik

We present BEDnet, a Java based middleware for creating and maintaining a Bluetooth based mobile ad-hoc network (MANET). MANETs are key to nomadic computing: Mobile units can set up spontaneous local networks when needed, removing the need for fixed network infrastructure, either as wireless access....... Based on the Java JSR-82 specification, BEDnet is portable to a wide selection of mobile phones, and is publicly available as open source software. Experiments show that e.g. media streaming over Bluetooth is feasible, and that BEDnet is able to set up a scatternet within a couple of minutes...

Functional Programming for Java Developers Tools for Better Concurrency, Abstraction, and Agility

CERN Document Server

Wampler, Dean

2011-01-01

Software development today is embracing functional programming (FP), whether it's for writing concurrent programs or for managing Big Data. Where does that leave Java developers? This concise book offers a pragmatic, approachable introduction to FP for Java developers or anyone who uses an object-oriented language. Dean Wampler, Java expert and author of Programming Scala (O'Reilly), shows you how to apply FP principles such as immutability, avoidance of side-effects, and higher-order functions to your Java code. Each chapter provides exercises to help you practice what you've learned. Once

Psychophysics in a Web browser? Comparing response times collected with JavaScript and Psychophysics Toolbox in a visual search task.

Science.gov (United States)

de Leeuw, Joshua R; Motz, Benjamin A

2016-03-01

Behavioral researchers are increasingly using Web-based software such as JavaScript to conduct response time experiments. Although there has been some research on the accuracy and reliability of response time measurements collected using JavaScript, it remains unclear how well this method performs relative to standard laboratory software in psychologically relevant experimental manipulations. Here we present results from a visual search experiment in which we measured response time distributions with both Psychophysics Toolbox (PTB) and JavaScript. We developed a methodology that allowed us to simultaneously run the visual search experiment with both systems, interleaving trials between two independent computers, thus minimizing the effects of factors other than the experimental software. The response times measured by JavaScript were approximately 25 ms longer than those measured by PTB. However, we found no reliable difference in the variability of the distributions related to the software, and both software packages were equally sensitive to changes in the response times as a result of the experimental manipulations. We concluded that JavaScript is a suitable tool for measuring response times in behavioral research.

Single event monitoring system based on Java 3D and XML data binding

International Nuclear Information System (INIS)

Wang Liang; Chinese Academy of Sciences, Beijing; Zhu Kejun; Zhao Jingwei

2007-01-01

Online single event monitoring is important to BESIII DAQ System. Java3D is extension of Java Language in 3D technology, XML data binding is more efficient to handle XML document than SAX and DOM. This paper mainly introduce the implementation of BESIII single event monitoring system with Java3D and XML data binding, and interface for track fitting software with JNI technology. (authors)

Remodularizing Java programs for comprehension of features

DEFF Research Database (Denmark)

Olszak, Andrzej; Jørgensen, Bo Nørregaard

2009-01-01

. In absence of these mechanisms, feature implementations tend to be scattered and tangled in terms of object-oriented abstractions, making the code implementing features difficult to locate and comprehend. In this paper we present a semi-automatic method for feature-oriented remodularization of Java programs....... Our method uses execution traces to locate implementations of features, and Java packages to establish explicit feature modules. To evaluate usefulness of the approach, we present a case study where we apply our method to two real-world software systems. The obtained results indicate a significant...

JANIS: NEA JAva-based Nuclear Data Information System

Science.gov (United States)

Soppera, Nicolas; Bossant, Manuel; Cabellos, Oscar; Dupont, Emmeric; Díez, Carlos J.

2017-09-01

JANIS (JAva-based Nuclear Data Information System) software is developed by the OECD Nuclear Energy Agency (NEA) Data Bank to facilitate the visualization and manipulation of nuclear data, giving access to evaluated nuclear data libraries, such as ENDF, JEFF, JENDL, TENDL etc., and also to experimental nuclear data (EXFOR) and bibliographical references (CINDA). It is available as a standalone Java program, downloadable and distributed on DVD and also a web application available on the NEA website. One of the main new features in JANIS is the scripting capability via command line, which notably automatizes plots generation and permits automatically extracting data from the JANIS database. Recent NEA software developments rely on these JANIS features to access nuclear data, for example the Nuclear Data Sensitivity Tool (NDaST) makes use of covariance data in BOXER and COVERX formats, which are retrieved from the JANIS database. New features added in this version of the JANIS software are described along this paper with some examples.

A High-Availability, Distributed Hardware Control System Using Java

Science.gov (United States)

Niessner, Albert F.

2011-01-01

Two independent coronagraph experiments that require 24/7 availability with different optical layouts and different motion control requirements are commanded and controlled with the same Java software system executing on many geographically scattered computer systems interconnected via TCP/IP. High availability of a distributed system requires that the computers have a robust communication messaging system making the mix of TCP/IP (a robust transport), and XML (a robust message) a natural choice. XML also adds the configuration flexibility. Java then adds object-oriented paradigms, exception handling, heavily tested libraries, and many third party tools for implementation robustness. The result is a software system that provides users 24/7 access to two diverse experiments with XML files defining the differences

SCJ-Circus: a refinement-oriented formal notation for Safety-Critical Java

Directory of Open Access Journals (Sweden)

Alvaro Miyazawa

2016-06-01

Full Text Available Safety-Critical Java (SCJ is a version of Java whose goal is to support the development of real-time, embedded, safety-critical software. In particular, SCJ supports certification of such software by introducing abstractions that enforce a simpler architecture, and simpler concurrency and memory models. In this paper, we present SCJ-Circus, a refinement-oriented formal notation that supports the specification and verification of low-level programming models that include the new abstractions introduced by SCJ. SCJ-Circus is part of the family of state-rich process algebra Circus, as such, SCJ-Circus includes the Circus constructs for modelling sequential and concurrent behaviour, real-time and object orientation. We present here the syntax and semantics of SCJ-Circus, which is defined by mapping SCJ-Circus constructs to those of standard Circus. This is based on an existing approach for modelling SCJ programs. We also extend an existing Circus-based refinement strategy that targets SCJ programs to account for the generation of SCJ-Circus models close to implementations in SCJ.

Verification of Java Programs using Symbolic Execution and Invariant Generation

Science.gov (United States)

Pasareanu, Corina; Visser, Willem

2004-01-01

Software verification is recognized as an important and difficult problem. We present a norel framework, based on symbolic execution, for the automated verification of software. The framework uses annotations in the form of method specifications an3 loop invariants. We present a novel iterative technique that uses invariant strengthening and approximation for discovering these loop invariants automatically. The technique handles different types of data (e.g. boolean and numeric constraints, dynamically allocated structures and arrays) and it allows for checking universally quantified formulas. Our framework is built on top of the Java PathFinder model checking toolset and it was used for the verification of several non-trivial Java programs.

Learning Java

CERN Document Server

Niemeyer, Patrick

2005-01-01

Version 5.0 of the Java 2 Standard Edition SDK is the most important upgrade since Java first appeared a decade ago. With Java 5.0, you'll not only find substantial changes in the platform, but to the language itself-something that developers of Java took five years to complete. The main goal of Java 5.0 is to make it easier for you to develop safe, powerful code, but none of these improvements makes Java any easier to learn, even if you've programmed with Java for years. And that means our bestselling hands-on tutorial takes on even greater significance. Learning Java is the most widely sou

The CERN PS/SL Controls Java Application Programming Interface

International Nuclear Information System (INIS)

I. Deloose; J. Cuperus; P. Charrue; F. DiMaio; K. Kostro; M. Vanden Eynden; W. Watson

1999-01-01

The PS/SL Convergence Project was launched in March 1998. Its objective is to deliver a common control as infrastructure for the CERN accelerators by year 2001. In the framework of this convergence activity, a project was launched to develop a Java Application Programming Interface (API) between programs written in the Java language and the PS and SL accelerator equipment. This Java API was specified and developed in collaboration with TJNAF. It is based on the Java CDEV [1] package that has been extended in order to end up with a CERN/TJNAF common product. It implements a detailed model composed of devices organized in named classes that provide a property-based interface. It supports data subscription and introspection facilities. The device model is presented and the capabilities of the API are described with syntax examples. The software architecture is also described

JavaD: Bringing Ownership Domains to Mainstream Java

National Research Council Canada - National Science Library

Abi-Antoun, Marwan; Aldrich, Jonathan

2006-01-01

.... As a result, none of the tool support for Java programs is available for AliasJava programs, making it harder to justify the case that Java programs are easier to evolve with Alias-Java annotations than without...

Java Expert GUI framework for CERN beam instrumentation systems

CERN Document Server

Bart Pedersen, S; Jackson, S

2011-01-01

The CERN Beam Instrumentation Group’s software section has recently performed a study of the tools used to produce Java expert GUI applications. This paper will present the analysis that was made to understand the requirements for generic components and the resulting tools including a collection of Java components that have been made available for a wider audience. The paper will also discuss the prospect of using Maven as the deployment tool with its implications for developers and users.

CERN Technical Training 2006: Software and System Technologies Curriculum - Scheduled Course Sessions (October 2006-March 2007)

CERN Multimedia

2006-01-01

The Software and System Technologies Curriculum of the CERN Technical Training Programme offers comprehensive training in C++, Java, Perl, Python, XML, OO programming, JCOP/PVSS, database design and Oracle. In the Oracle, C++, OO and Java course series there are some places available on the following course sessions, currently scheduled until March 2007: Object-Oriented Analysis and Design using UML: 17-19 October 2006 (3 days) JAVA - Level 1: 30 October - 1 November 2006 (3 days) C++ Programming Part 1 - Introduction to Object-Oriented Design and Programming: 14-16 November 2006 (3 days) Oracle Database Server Administration: 23-29 November 2007 (5 days) JAVA - Level 2: 4-7 December 2006 (4 days) C++ Programming Part 2 - Advanced C++ and its Traps and Pitfalls: 12-15 December 2006 (4 days) JAVA 2 Enterprise Edition - Part 2: Enterprise JavaBeans: 18-20 December 2006 (3 days) JAVA 2 Enterprise Edition - Part 1: Web Applications: 15-16 January 2007 (2 days) C++ Programming Part 3 - Templates and the STL (St...

Conversion of the agent-oriented domain-specific language ALAS into JavaScript

Science.gov (United States)

Sredojević, Dejan; Vidaković, Milan; Okanović, Dušan; Mitrović, Dejan; Ivanović, Mirjana

2016-06-01

This paper shows generation of JavaScript code from code written in agent-oriented domain-specific language ALAS. ALAS is an agent-oriented domain-specific language for writing software agents that are executed within XJAF middleware. Since the agents can be executed on various platforms, they must be converted into a language of the target platform. We also try to utilize existing tools and technologies to make the whole conversion process as simple as possible, as well as faster and more efficient. We use the Xtext framework that is compatible with Java to implement ALAS infrastructure - editor and code generator. Since Xtext supports Java, generation of Java code from ALAS code is straightforward. To generate a JavaScript code that will be executed within the target JavaScript XJAF implementation, Google Web Toolkit (GWT) is used.

Analysis of variables affecting unemployment rate and detecting for cluster in West Java, Central Java, and East Java in 2012

Science.gov (United States)

Samuel, Putra A.; Widyaningsih, Yekti; Lestari, Dian

2016-02-01

The objective of this study is modeling the Unemployment Rate (UR) in West Java, Central Java, and East Java, with rate of disease, infant mortality rate, educational level, population size, proportion of married people, and GDRP as the explanatory variables. Spatial factors are also considered in the modeling since the closer the distance, the higher the correlation. This study uses the secondary data from BPS (Badan Pusat Statistik). The data will be analyzed using Moran I test, to obtain the information about spatial dependence, and using Spatial Autoregressive modeling to obtain the information, which variables are significant affecting UR and how great the influence of the spatial factors. The result is, variables proportion of married people, rate of disease, and population size are related significantly to UR. In all three regions, the Hotspot of unemployed will also be detected districts/cities using Spatial Scan Statistics Method. The results are 22 districts/cities as a regional group with the highest unemployed (Most likely cluster) in the study area; 2 districts/cities as a regional group with the highest unemployed in West Java; 1 district/city as a regional groups with the highest unemployed in Central Java; 15 districts/cities as a regional group with the highest unemployed in East Java.

Java Dust: How Small Can Embedded Java Be?

DEFF Research Database (Denmark)

Caska, James; Schoeberl, Martin

2011-01-01

Java is slowly being accepted as a language and platform for embedded devices. However, the memory requirements of the Java library and runtime are still troublesome. A Java system is considered small when it requires less than 1 MB, and within the embedded domain small microcontollers with a few...... KB on-chip Flash memory and even less on-chip RAM are very common. For such small devices Java is a clearly challenging. In this paper we present the combination of the Java compiler Muvium for microcontrollers with the tiny soft-core Leros for an FPGA. To the best of our knowledge, the presented...... embedded Java system is the smallest Java system available. The Leros processor consumes less than 5% of the logic cells of the smallest FPGA from Altera and the Muvium compiler produces a JVM, including the Java application, that can execute in a few KB ROM and less than 1 KB RAM. The Leros processor...

VennDIS: a JavaFX-based Venn and Euler diagram software to generate publication quality figures.

Science.gov (United States)

Ignatchenko, Vladimir; Ignatchenko, Alexandr; Sinha, Ankit; Boutros, Paul C; Kislinger, Thomas

2015-04-01

Venn diagrams are graphical representations of the relationships among multiple sets of objects and are often used to illustrate similarities and differences among genomic and proteomic datasets. All currently existing tools for producing Venn diagrams evince one of two traits; they require expertise in specific statistical software packages (such as R), or lack the flexibility required to produce publication-quality figures. We describe a simple tool that addresses both shortcomings, Venn Diagram Interactive Software (VennDIS), a JavaFX-based solution for producing highly customizable, publication-quality Venn, and Euler diagrams of up to five sets. The strengths of VennDIS are its simple graphical user interface and its large array of customization options, including the ability to modify attributes such as font, style and position of the labels, background color, size of the circle/ellipse, and outline color. It is platform independent and provides real-time visualization of figure modifications. The created figures can be saved as XML files for future modification or exported as high-resolution images for direct use in publications. © 2014 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Image interface in Java for tomographic reconstruction in nuclear medicine

International Nuclear Information System (INIS)

Andrade, M.A.; Silva, A.M. Marques da

2004-01-01

The aim of this study is to implement a software for tomographic reconstruction of SPECT data from Nuclear Medicine with a flexible interface design, cross-platform, written in Java. Validation tests were performed based on SPECT simulated data. The results showed that the implemented algorithms and filters agree with the theoretical context. We intend to extend the system by implementing additional tomographic reconstruction techniques and Java threads, in order to provide simultaneously image processing. (author)

Why and How Java Developers Break APIs

OpenAIRE

Brito, Aline; Xavier, Laerte; Hora, Andre; Valente, Marco Tulio

2018-01-01

Modern software development depends on APIs to reuse code and increase productivity. As most software systems, these libraries and frameworks also evolve, which may break existing clients. However, the main reasons to introduce breaking changes in APIs are unclear. Therefore, in this paper, we report the results of an almost 4-month long field study with the developers of 400 popular Java libraries and frameworks. We configured an infrastructure to observe all changes in these libraries and t...

TS-05: 150 lines of java with high architectural complexity

DEFF Research Database (Denmark)

Christensen, Henrik Bærbak

2005-01-01

In the short time span available in a software architecture course, it is difficult to find a software system that is both interesting from an architectural perspective and so small that it does not overwhelm the students.We present TS-05 which is a bare 150 line Java "toy-system" that never...

A Directory Service for the CERN PS/SL Java Programming Interface

International Nuclear Information System (INIS)

Cuperus, J.; Charrue, P.; DiMaio, F.; Kostro, K.; Watson, W.

1999-01-01

The CERN PS and SL accelerator control groups developed a common application programming interface (API) in Java [1]. Part of this API is a directory service that provide information about the underlying hardware and software. With this information, it is possible to write generic programs that do general actions on lists of devices without hard coding of device names. And, starting from a device name, full details about related devices, the device itself and its class and properties, can be obtained, including the meaning of bits and bit-patterns in status words. The interface definition is independent of any implementation but a reference implementation is provided using Java Database Connectivity (JDBC) against a set of tables in a relational database. Data from very different systems can be brought together and presented in a uniform way to the user. The full potential of the directory service is reached when it is used in software components (Java Beans)

CERN Technical Training 2006: Software and System Technologies Curriculum - Scheduled Course Sessions (October-December 2006)

CERN Multimedia

2006-01-01

he Software and System Technologies Curriculum of the CERN Technical Training Programme offers comprehensive training in C++, Java, Perl, Python, XML, OO programming, JCOP/PVSS, database design and Oracle. In the PERL, C++, OO and Java course series there are some places available on the following course sessions, scheduled until the end of this year: Object-Oriented Analysis and Design using UML: 17-19 October 2006 (3 days) JAVA 2 Enterprise Edition - Part 1: Web Applications: 19-20 October 2006 (2 days) JAVA - Level 1: 30 Oct. -1 Nov. 2006 (3 days) PERL 5 - Advanced Aspects: 2 November 2006 (1 day) C++ Programming Part 1 - Introduction to Object-Oriented Design and Programming: 14-16 November 2006 (3 days) JAVA - Level 2: 4-7 December 2006 (4 days) C++ Programming Part 2 - Advanced C++ and its Traps and Pitfalls: 12-15 December 2006 (4 days) JAVA 2 Enterprise Edition - Part 2: Enterprise JavaBeans : 18.20 December 2006 (3 days) All the above sessions will be given in English, at the CERN Training Centre....

CERN Technical Training 2006: Software and System Technologies Curriculum - Scheduled Course Sessions (August-December 2006)

CERN Multimedia

2006-01-01

The Software and System Technologies Curriculum of the CERN Technical Training Programme offers comprehensive training in C++, Java, Perl, Python, XML, OO programming, JCOP/PVSS, database design and Oracle. In the PERL, C++, OO and Java course series there are some places available on the following course sessions, scheduled until the end of this year: PERL 5 - Introduction: 31.8-1.9.2006 (2 days) C++ for Particle Physicists: 16-20.10.2006 (6 half days, the popular course given by Paul Kunz) Object-Oriented Analysis and Design using UML: 17-19.10.2006 (3 days) JAVA 2 Enterprise Edition - Part 1: Web Applications: 19-20.10.2006 (2 days) JAVA - Level 1: 30.10-1.11.2006 (3 days) PERL 5 - Advanced Aspects: 2.11.2006 (1 day) C++ Programming Part 1 - Introduction to Object-Oriented Design and Programming: 14-16.11.2006 (3 days) JAVA - Level 2: 4-7.12.2006 (4 days) C++ Programming Part 2 - Advanced C++ and its Traps and Pitfalls: 12-15.12.2006 (4 days) JAVA 2 Enterprise Edition - Part 2: Enterprise JavaBea...

Java Web Frameworks Which One to Choose?

OpenAIRE

Nassourou, Mohamadou

2010-01-01

This article discusses web frameworks that are available to a software developer in Java language. It introduces MVC paradigm and some frameworks that implement it. The article presents an overview of Struts, Spring MVC, JSF Frameworks, as well as guidelines for selecting one of them as development environment.

Beginning JavaFX

CERN Document Server

Mohan, Praveen

2010-01-01

The open source JavaFX platform offers a Java-based approach to rich Internet application (RIA) development - an alternative to Adobe Flash/Flex and Microsoft Silverlight. At over 100 million downloads, the new JavaFX is poised to be a significant player now. Written by a JavaFX engineer and developer, this book is one of the first on the new JavaFX platform to give you the following: * The fundamentals of JavaFX scripting on desktop and mobile platforms * Examples of RIAs using JavaFX Graphics * Media and animation using JavaFX See how JavaFX gives you dynamic Java effects in your RIA applica

Java Series: Java Essentials I. what is Java. Basic Language Constructs

CERN Multimedia

CERN. Geneva

2000-01-01

The tutorial will firstly give a very first general introduction of what is the JAVA programming language and an overview of what the Java Development environment consists of. It will briefly explain its relation to the Internet, Web browsers and Operating Systems and show how to access Java at CERN. Then, the tutorial will be centred on explaining the basic language constructs to create classes, instances, and implement inheritance, destroy objects, etc. It will show the usage of interfaces. The tutorial is open to everyone. Attendants are required to have a basic intuition on what Object Orientation is, or to have followed the previous tutorial on the Java Serires. Organiser(s): M.Marquina and R.Ramos /IT-User Support

Software SCMS re-engineering for a objected oriented language (JAVA) for use in construction of segmented phantoms

International Nuclear Information System (INIS)

Possani, Rafael Guedes

2012-01-01

Recent treatment planning systems depend strongly on CT images and the tendency is that the internal dosimetry procedures in nuclear medicine therapy be also based on images, such as magnetic resonance imaging (MRI) and computed tomography (CT), to extract anatomical and histological information, as well as, functional imaging or activities map as PET and SPECT. This information associated with a radiation transport simulation software is used to estimate internal dose in patients undergoing treatment in nuclear medicine. This work aims to re-engineer the software SCMS, which is an interface software between the Monte Carlo code MCNP, and the medical images, that carry information from the patient in treatment. In other words, the necessary information contained in the images are interpreted and presented in a specific format to the Monte Carlo MCNP code to perform the simulation of radiation transport. Therefore, the user does not need to understand the complex process of inputting data on MCNP, as the SCMS is responsible for automatically constructing anatomical data from the patient, as well as the radioactive source data. The SCMS was originally developed in Fortran-77. In this work it was rewritten in an object-oriented language (JAVA). New features and data options have also been incorporated into the software. Thus, the new software has a number of improvements, such as intuitive GUI and a menu for the selection of the energy spectra correspondent to a specific radioisotope stored in a XML data bank. The new version also supports new materials and the user can specify an image region of interest for the calculation of absorbed dose. (author)

Data mining for clustering naming of the village at Java Island

Science.gov (United States)

Setiawan Abdullah, Atje; Nurani Ruchjana, Budi; Hidayat, Akik; Akmal; Setiana, Deni

2017-10-01

Clustering of query based data mining to identify the meaning of the naming of the village in Java island, done by exploring the database village with three categories namely: prefix in the naming of the village, syllables contained in the naming of the village, and full word naming of the village which is actually used. While syllables contained in the naming of the village are classified by the behaviour of the culture and character of each province that describes the business, feelings, circumstances, places, nature, respect, plants, fruits, and animals. Sources of data used for the clustering of the naming of the village on the island of Java was obtained from Geospatial Information Agency (BIG) in the form of a complete village name data with the coordinates in six provinces in Java, which is arranged in a hierarchy of provinces, districts / cities, districts and villages. The research method using KDD (Knowledge Discovery in Database) through the process of preprocessing, data mining and postprocessing to obtain knowledge. In this study, data mining applications to facilitate the search query based on the name of the village, using Java software. While the contours of a map is processed using ArcGIS software. The results of the research can give recommendations to stakeholders such as the Department of Tourism to describe the meaning of the classification of naming the village according to the character in each province at Java island.

Safety-Critical Java for Embedded Systems

DEFF Research Database (Denmark)

Rios Rivas, Juan Ricardo

for Java aims at providing a reduced set of the Java programming language that can be used for systems that need to be certified at the highest levels of criticality. Safety-critical Java (SCJ) restricts how a developer can structure an application by providing a specific programming model...... and by restricting the set of methods and libraries that can be used. Furthermore, its memory model do not use a garbage-collected heap but scoped memories. In this thesis we examine the use of the SCJ specification through an implementation in a time-predictable, FPGA-based Java processor. The specification is now...

Efficient Incremental Checkpointing of Java Programs

DEFF Research Database (Denmark)

Lawall, Julia Laetitia; Muller, Gilles

2000-01-01

This paper investigates the optimization of language-level checkpointing of Java programs. First, we describe how to systematically associate incremental checkpoints with Java classes. While being safe, the genericness of this solution induces substantial execution overhead. Second, to solve...

Programación de espacios de estados con Java en asignaturas de inteligencia artificial

OpenAIRE

Mandow, Lawrence

2015-01-01

La representación mediante espacios de estados es un elemento central en los cursos sobre inteligencia artificial simbólica. Las prácticas de programación resultan muy importantes para la asimilación de este concepto. En este trabajo presentamos un software orientado a objetos en Java diseñado para facilitar la asimilación del concepto de espacio de estados y lo comparamos con las clases proporcionadas para la misma tarea en el software aima-java. A continuación se res...

Interprocess Communication with Java in a Microsoft Windows Environment

Directory of Open Access Journals (Sweden)

Dylan Gregory Smith

2017-12-01

Full Text Available The Java programming language provides a comprehensive set of multithreading programming techniques but currently lacks interprocess communication (IPC facilities, other than slow socket-based communication mechanisms (which are intended primarily for distributed systems, not interprocess communication on a multicore or multiprocessor system. This is problematic due to the ubiquity of modern multicore processors, and the widespread use of Java as a programming language throughout the software development industry. This work aimed to address this problem by utilising Microsoft Windows’ native IPC mechanisms through a framework known as the Java Native Interface. This enabled the use of native C code that invoked the IPC mechanisms provided by Windows, which allowed successful synchronous communication between separate Java processes. The results obtained illustrate the performance dichotomy between socket-based communication and native IPC facilities, with Windows’ facilities providing significantly faster communication. Ultimately, these results show that there are far more effective communication structures available. In addition, this work presents generic considerations that may aid in the eventual design of a generic, platform-independent IPC system for the Java programming language. The fundamental considerations include shared memory with semaphore synchronisation, named pipes and a socket communication model.

Writing Compilers and Interpreters A Software Engineering Approach

CERN Document Server

Mak, Ronald

2011-01-01

Long-awaited revision to a unique guide that covers both compilers and interpreters Revised, updated, and now focusing on Java instead of C++, this long-awaited, latest edition of this popular book teaches programmers and software engineering students how to write compilers and interpreters using Java. You?ll write compilers and interpreters as case studies, generating general assembly code for a Java Virtual Machine that takes advantage of the Java Collections Framework to shorten and simplify the code. In addition, coverage includes Java Collections Framework, UML modeling, object-oriented p

Viewing multiple sequence alignments with the JavaScript Sequence Alignment Viewer (JSAV).

Science.gov (United States)

Martin, Andrew C R

2014-01-01

The JavaScript Sequence Alignment Viewer (JSAV) is designed as a simple-to-use JavaScript component for displaying sequence alignments on web pages. The display of sequences is highly configurable with options to allow alternative coloring schemes, sorting of sequences and 'dotifying' repeated amino acids. An option is also available to submit selected sequences to another web site, or to other JavaScript code. JSAV is implemented purely in JavaScript making use of the JQuery and JQuery-UI libraries. It does not use any HTML5-specific options to help with browser compatibility. The code is documented using JSDOC and is available from http://www.bioinf.org.uk/software/jsav/.

Multi-Level Formation of Complex Software Systems

Directory of Open Access Journals (Sweden)

Hui Li

2016-05-01

Full Text Available We present a multi-level formation model for complex software systems. The previous works extract the software systems to software networks for further studies, but usually investigate the software networks at the class level. In contrast to these works, our treatment of software systems as multi-level networks is more realistic. In particular, the software networks are organized by three levels of granularity, which represents the modularity and hierarchy in the formation process of real-world software systems. More importantly, simulations based on this model have generated more realistic structural properties of software networks, such as power-law, clustering and modularization. On the basis of this model, how the structure of software systems effects software design principles is then explored, and it could be helpful for understanding software evolution and software engineering practices.

Upgrading a TEXTOR Data Acquisition system for remote participation using Java and Corba

International Nuclear Information System (INIS)

Korten, M.; Becks, B.; Blom, H.; Busch, P.; Kemmerling, G.; Kooijman, W.; Krom, J.G.; Laat, C.T.A.M. de; Lourens, W.; Meer, E. van der; Nideroest, B.; Oomens, A.A.M.; Wijnoltz, F.; Samm, U.

2000-01-01

The partners in the Trilateral Euregio Cluster (TEC) are implementing and developing Remote Participation technologies that are expected to support a joint research programme on the experimental facility TEXTOR-94. A common TEC architecture for our heterogeneous data acquisition and storage systems is seen to be one of the major issues. As a consequence, legacy systems will be affected and have to be upgraded for optimised wide area network communication, platform independent data access and display. The object oriented redesign of the system to be described follows theses guidelines. The architecture of the system under development uses Java as programming environment and CORBA as Client/Server communication standard. It is described in this paper, how an operational Data Acquisition CAMAC subsystem of TEXTOR-94 based on OpenVMS and Decnet communications could be redesigned into an open, object oriented architecture in a platform independent way. A suitable Web Browser is required on the client side without further installation of application software to run the server. CORBA static method invocations are used for the communication between the client and server. At the server side, there is only Java code on top of the existing commercial OpenVMS CAMAC device driver. A modular object oriented software design permitted to eliminate dependencies of the generic module levels from the underlying bus systems. Porting of the Java code to other platforms like Windows NT and Linux has proven to be successful

Java for dummies

CERN Document Server

Burd, Barry

2011-01-01

The top-selling beginning Java book is now fully updated for Java 7! Java is the platform-independent, object-oriented programming language used for developing web and mobile applications. The revised version offers new functionality and features that have programmers excited, and this popular guide covers them all. This book helps programmers create basic Java objects and learn when they can reuse existing code. It's just what inexperienced Java developers need to get going quickly with Java 2 Standard Edition 7.0 (J2SE 7.0) and Java Development Kit 7.0 (JDK 7). Explores how the new version o

Visualization program development using Java

International Nuclear Information System (INIS)

Sasaki, Akira; Suto, Keiko

2002-03-01

Method of visualization programs using Java for the PC with the graphical user interface (GUI) is discussed, and applied to the visualization and analysis of 1D and 2D data from experiments and numerical simulations. Based on an investigation of programming techniques such as drawing graphics and event driven program, example codes are provided in which GUI is implemented using the Abstract Window Toolkit (AWT). The marked advantage of Java comes from the inclusion of library routines for graphics and networking as its language specification, which enables ordinary scientific programmers to make interactive visualization a part of their simulation codes. Moreover, the Java programs are machine independent at the source level. Object oriented programming (OOP) methods used in Java programming will be useful for developing large scientific codes which includes number of modules with better maintenance ability. (author)

Implementing the Gaia Astrometric Global Iterative Solution (AGIS) in Java

Science.gov (United States)

O'Mullane, William; Lammers, Uwe; Lindegren, Lennart; Hernandez, Jose; Hobbs, David

2011-10-01

This paper provides a description of the Java software framework which has been constructed to run the Astrometric Global Iterative Solution for the Gaia mission. This is the mathematical framework to provide the rigid reference frame for Gaia observations from the Gaia data itself. This process makes Gaia a self calibrated, and input catalogue independent, mission. The framework is highly distributed typically running on a cluster of machines with a database back end. All code is written in the Java language. We describe the overall architecture and some of the details of the implementation.

Reliable JavaScript how to code safely in the world's most dangerous language

CERN Document Server

Spencer, Lawrence

2015-01-01

Create more robust applications with a test-first approach to JavaScript Reliable JavaScript, How to Code Safely in the World's Most Dangerous Language demonstrates how to create test-driven development for large-scale JavaScript applications that will stand the test of time and stay accurate through long-term use and maintenance. Taking a test-first approach to software architecture, this book walks you through several patterns and practices and explains what they are supposed to do by having you write unit tests. Write the code to pass the unit tests, so you not only develop your technique

Barriers to utilization of postnatal care at village level in Klaten district, central Java Province, Indonesia.

Science.gov (United States)

Probandari, Ari; Arcita, Akhda; Kothijah, Kothijah; Pamungkasari, Eti Poncorini

2017-08-07

Maternal health remains a persisting public health challenge in Indonesia. Postnatal complications, in particular, are considered as maternal health problems priority that should be addressed. Conducting adequate care for postnatal complications will improve the quality of life of mothers and babies. With the universal health coverage implementation, the Indonesian government provides free maternal and child health services close to clients at the village level, which include postnatal care. Our study aimed to explore barriers to utilization of postnatal care at the village level in Klaten district, Central Java Province, Indonesia. A qualitative study was conducted in March 2015 - June 2016 in Klaten district, Central Java, Indonesia. We selected a total of 19 study participants, including eight mothers with postnatal complications, six family members, and five village midwives for in-depth interviews. We conducted a content analysis technique on verbatim transcripts of the interviews using open code software. This study found three categories of barriers to postnatal care utilization in villages: mother and family members' health literacy on postnatal care, sociocultural beliefs and practices, and health service responses. Most mothers did not have adequate knowledge and skills regarding postnatal care that reflected how they lacked awareness and practice of postnatal care. Inter-generational norms and myths hindered mothers from utilizing postnatal care and from having adequate nutritional intake during the postnatal period. Mothers and family members conducted unsafe self-treatment to address perceived minor postnatal complication. Furthermore, social power from extended family influenced the postnatal care health literacy for mother and family members. Postnatal care in the village lacked patient-centered care practices. Additionally, midwives' workloads and capacities to conduct postnatal information, education and counseling were also issues. Despite the

The r-Java 2.0 code: nuclear physics

Science.gov (United States)

Kostka, M.; Koning, N.; Shand, Z.; Ouyed, R.; Jaikumar, P.

2014-08-01

Aims: We present r-Java 2.0, a nucleosynthesis code for open use that performs r-process calculations, along with a suite of other analysis tools. Methods: Equipped with a straightforward graphical user interface, r-Java 2.0 is capable of simulating nuclear statistical equilibrium (NSE), calculating r-process abundances for a wide range of input parameters and astrophysical environments, computing the mass fragmentation from neutron-induced fission and studying individual nucleosynthesis processes. Results: In this paper we discuss enhancements to this version of r-Java, especially the ability to solve the full reaction network. The sophisticated fission methodology incorporated in r-Java 2.0 that includes three fission channels (beta-delayed, neutron-induced, and spontaneous fission), along with computation of the mass fragmentation, is compared to the upper limit on mass fission approximation. The effects of including beta-delayed neutron emission on r-process yield is studied. The role of Coulomb interactions in NSE abundances is shown to be significant, supporting previous findings. A comparative analysis was undertaken during the development of r-Java 2.0 whereby we reproduced the results found in the literature from three other r-process codes. This code is capable of simulating the physical environment of the high-entropy wind around a proto-neutron star, the ejecta from a neutron star merger, or the relativistic ejecta from a quark nova. Likewise the users of r-Java 2.0 are given the freedom to define a custom environment. This software provides a platform for comparing proposed r-process sites.

AirShow 1.0 CFD Software Users' Guide

Science.gov (United States)

Mohler, Stanley R., Jr.

2005-01-01

AirShow is visualization post-processing software for Computational Fluid Dynamics (CFD). Upon reading binary PLOT3D grid and solution files into AirShow, the engineer can quickly see how hundreds of complex 3-D structured blocks are arranged and numbered. Additionally, chosen grid planes can be displayed and colored according to various aerodynamic flow quantities such as Mach number and pressure. The user may interactively rotate and translate the graphical objects using the mouse. The software source code was written in cross-platform Java, C++, and OpenGL, and runs on Unix, Linux, and Windows. The graphical user interface (GUI) was written using Java Swing. Java also provides multiple synchronized threads. The Java Native Interface (JNI) provides a bridge between the Java code and the C++ code where the PLOT3D files are read, the OpenGL graphics are rendered, and numerical calculations are performed. AirShow is easy to learn and simple to use. The source code is available for free from the NASA Technology Transfer and Partnership Office.

Effectiveness of Ministry of Internal Affairs Regulation Number 15 Year 2008 about Mainstreaming Gender on Basic Education Level in the East Java, Indonesia

Science.gov (United States)

Handayani, Trisakti; Widodo, Wahyu

2016-01-01

General purpose of this research are: assessing the implementation of Permendagri no. 15 year 2008 about Gender Mainstreaming on Basic Education Levels in the East Java Province, analyze the problem of the implementation of Permendagri no. 15 year 2008 about Gender Mainstreaming on Basic Education Levels in the East Java Province and analyze the…

Jannovar: a java library for exome annotation.

Science.gov (United States)

Jäger, Marten; Wang, Kai; Bauer, Sebastian; Smedley, Damian; Krawitz, Peter; Robinson, Peter N

2014-05-01

Transcript-based annotation and pedigree analysis are two basic steps in the computational analysis of whole-exome sequencing experiments in genetic diagnostics and disease-gene discovery projects. Here, we present Jannovar, a stand-alone Java application as well as a Java library designed to be used in larger software frameworks for exome and genome analysis. Jannovar uses an interval tree to identify all transcripts affected by a given variant, and provides Human Genome Variation Society-compliant annotations both for variants affecting coding sequences and splice junctions as well as untranslated regions and noncoding RNA transcripts. Jannovar can also perform family-based pedigree analysis with Variant Call Format (VCF) files with data from members of a family segregating a Mendelian disorder. Using a desktop computer, Jannovar requires a few seconds to annotate a typical VCF file with exome data. Jannovar is freely available under the BSD2 license. Source code as well as the Java application and library file can be downloaded from http://compbio.charite.de (with tutorial) and https://github.com/charite/jannovar. © 2014 WILEY PERIODICALS, INC.

Metodologías ágiles: herramientas y modelo de desarrollo para aplicaciones Java EE como metodologia empresarial

OpenAIRE

Carvajal Riola, José Carlos

2008-01-01

The aim of this document is to study the Java EE technologies and the different kind of software projects that you can develop with, later we start an historical review of methodologies and make a justified selection of 6 agile methodologies, to compare and analysis. Another objective of this document is to identify the main tools needed to develop software and specially, with agile methodologies and Java EE technologies. The last objective of the document is to show us a practice case, where...

JavaScript bible

CERN Document Server

Goodman, Danny; Novitski, Paul; Rayl, Tia Gustaffl

2009-01-01

The bestselling JavaScript reference, now updated to reflect changes in technology and best practices. As the most comprehensive book on the market, the JavaScript Bible is a classic bestseller that keeps you up to date on the latest changes in JavaScript, the leading technology for incorporating interactivity into Web pages. Part tutorial, part reference, this book serves as both a learning tool for building new JavaScript skills as well as a detailed reference for the more experienced JavaScript user. You'll get up-to-date coverage on the latest JavaScript practices that have been implemente

MzJava: An open source library for mass spectrometry data processing.

Science.gov (United States)

Horlacher, Oliver; Nikitin, Frederic; Alocci, Davide; Mariethoz, Julien; Müller, Markus; Lisacek, Frederique

2015-11-03

Mass spectrometry (MS) is a widely used and evolving technique for the high-throughput identification of molecules in biological samples. The need for sharing and reuse of code among bioinformaticians working with MS data prompted the design and implementation of MzJava, an open-source Java Application Programming Interface (API) for MS related data processing. MzJava provides data structures and algorithms for representing and processing mass spectra and their associated biological molecules, such as metabolites, glycans and peptides. MzJava includes functionality to perform mass calculation, peak processing (e.g. centroiding, filtering, transforming), spectrum alignment and clustering, protein digestion, fragmentation of peptides and glycans as well as scoring functions for spectrum-spectrum and peptide/glycan-spectrum matches. For data import and export MzJava implements readers and writers for commonly used data formats. For many classes support for the Hadoop MapReduce (hadoop.apache.org) and Apache Spark (spark.apache.org) frameworks for cluster computing was implemented. The library has been developed applying best practices of software engineering. To ensure that MzJava contains code that is correct and easy to use the library's API was carefully designed and thoroughly tested. MzJava is an open-source project distributed under the AGPL v3.0 licence. MzJava requires Java 1.7 or higher. Binaries, source code and documentation can be downloaded from http://mzjava.expasy.org and https://bitbucket.org/sib-pig/mzjava. This article is part of a Special Issue entitled: Computational Proteomics. Copyright © 2015 Elsevier B.V. All rights reserved.

Begining Java EE 7

CERN Document Server

Gonclaves, Antonio

2013-01-01

Java Enterprise Edition (Java EE) continues to be one of the leading Java technologies and platforms. Beginning Java EE 7 is the first tutorial book on Java EE 7. Step by step and easy to follow, this book describes many of the Java EE 7 specifications and reference implementations, and shows them in action using practical examples. This definitive book also uses the newest version of GlassFish to deploy and administer the code examples. Written by an expert member of the Java EE specification request and review board in the Java Community Process (JCP), this book contains the best information possible, from an expert’s perspective on enterprise Java technologies.

Access Control of Web and Java Based Applications

Science.gov (United States)

Tso, Kam S.; Pajevski, Michael J.; Johnson, Bryan

2011-01-01

Cyber security has gained national and international attention as a result of near continuous headlines from financial institutions, retail stores, government offices and universities reporting compromised systems and stolen data. Concerns continue to rise as threats of service interruption, and spreading of viruses become ever more prevalent and serious. Controlling access to application layer resources is a critical component in a layered security solution that includes encryption, firewalls, virtual private networks, antivirus, and intrusion detection. In this paper we discuss the development of an application-level access control solution, based on an open-source access manager augmented with custom software components, to provide protection to both Web-based and Java-based client and server applications.

JavaScript Pocket Reference

CERN Document Server

Flanagan, David

1998-01-01

JavaScript is a powerful, object-based scripting language that can be embedded directly in HTML pages. It allows you to create dynamic, interactive Web-based applications that run completely within a Web browser -- JavaScript is the language of choice for developing Dynamic HTML (DHTML) content. JavaScript can be integrated effectively with CGI and Java to produce sophisticated Web applications, although, in many cases, JavaScript eliminates the need for complex CGI scripts and Java applets altogether. The JavaScript Pocket Reference is a companion volume to JavaScript: The Definitive Guide

A desktop 3D printer in safety-critical Java

DEFF Research Database (Denmark)

Strøm, Tórur Biskopstø; Schoeberl, Martin

2012-01-01

there exist several safety-critical Java framework implementations, there is a lack of safety-critical use cases implemented according to the specification. In this paper we present a 3D printer and its safety-critical Java level 1 implementation as a use case. With basis in the implementation we evaluate......It is desirable to bring Java technology to safety-critical systems. To this end The Open Group has created the safety-critical Java specification, which will allow Java applications, written according to the specification, to be certifiable in accordance with safety-critical standards. Although...

A Standalone Vision Impairments Simulator for Java Swing Applications

Science.gov (United States)

Oikonomou, Theofanis; Votis, Konstantinos; Korn, Peter; Tzovaras, Dimitrios; Likothanasis, Spriridon

A lot of work has been done lately in an attempt to assess accessibility. For the case of web rich-client applications several tools exist that simulate how a vision impaired or colour-blind person would perceive this content. In this work we propose a simulation tool for non-web JavaTM Swing applications. Developers and designers face a real challenge when creating software that has to cope with a lot of interaction situations, as well as specific directives for ensuring an accessible interaction. The proposed standalone tool will assist them to explore user-centered design and important accessibility issues for their JavaTM Swing implementations.

The Delft-Java Engine

NARCIS (Netherlands)

Glossner III, C.J.

2001-01-01

In this dissertation, we describe the DELFT-JAVA engine - a 32-bit RISC-based architecture that provides high performance JAVA program execution. More specifically we describe a microarchitecture that accelerates JAVA execution and provide details of the DELFT-JAVA architecture for executing JAVA

Java Series: Java Essentials II Advanced Language Constructs

CERN Multimedia

CERN. Geneva

2000-01-01

This tutorial will show how Java uses important language constructs, and the set of classes typically used in common tasks. It will briefly show conditional and loops structures and then will introduce the most significative classes included in the java.util package, such as vectors, collections, enumeration, etc. It will finally explain the usage and handling of exceptions in Java.Organiser(s): M.Marquina and R.Ramos /IT-User Support

Grain-A Java data analysis system for Total Data Readout

International Nuclear Information System (INIS)

Rahkila, P.

2008-01-01

Grain is a data analysis system developed to be used with the novel Total Data Readout data acquisition system. In Total Data Readout all the electronics channels are read out asynchronously in singles mode and each data item is timestamped. Event building and analysis has to be done entirely in the software post-processing the data stream. A flexible and efficient event parser and the accompanying software system have been written entirely in Java. The design and implementation of the software are discussed along with experiences gained in running real-life experiments

JESS: Java extensible snakes system

Science.gov (United States)

McInerney, Tim; Akhavan Sharif, M. Reza; Pashotanizadeh, Nasrin

2005-04-01

Snakes (Active Contour Models) are powerful model-based image segmentation tools. Although researchers have proven them especially useful in medical image analysis over the past decade, Snakes have remained primarily in the academic world and they have not become widely used in clinical practice or widely available in commercial packages. A number of confusing and specialized variants exist and there has been no standard open-source implementation available. To address this problem, we present a Java Extensible Snakes System (JESS) that is general, portable, and extensible. The system uses Java Swing classes to allow for the rapid development of custom graphical user interfaces (GUI's). It also incorporates the Java Advanced Imaging(JAI) class library, which provide custom image preprocessing, image display and general image I/O. The Snakes algorithm itself is written in a hierarchical fashion, consisting of a general Snake class and several subclasses that span the main variants of Snakes including a new, powerful, robust subdivision-curve Snake. These subclasses can be easily and quickly extended and customized for any specific segmentation and analysis task. We demonstrate the utility of these classes for segmenting various anatomical structures from 2D medical images. We also demonstrate the effectiveness of JESS by using it to rapidly build a prototype semi-automatic sperm analysis system. The JESS software will be made publicly available in early 2005.

Safety-critical Java on a Java processor

DEFF Research Database (Denmark)

Schoeberl, Martin; Rios Rivas, Juan Ricardo

2012-01-01

The safety-critical Java (SCJ) specification is developed within the Java Community Process under specification request number JSR 302. The specification is available as public draft, but details are still discussed by the expert group. In this stage of the specification we need prototype...... implementations of SCJ and first test applications that are written with SCJ, even when the specification is not finalized. The feedback from those prototype implementations is needed for final decisions. To help the SCJ expert group, a prototype implementation of SCJ on top of the Java optimized processor...

Java for dummies

CERN Document Server

Burd

2014-01-01

The top-selling beginning Java book is now fully updated! As an unstoppably platform-independent, object-oriented programming language, Java is used for developing web and mobile applications. In this up-to-date bestselling book, veteran author Barry Burd shows you how to create basic Java objects and clearly explains when you should simply reuse existing code. Explores how the new version of Java offers more robust functionality and new features such as closures to keep Java competitive with more syntax-friendly languages like Python and Ruby Covers object-oriented programming basics with Ja

Deploying Java Platform to Design a Framework of Protective Shield ...

African Journals Online (AJOL)

West African Journal of Industrial and Academic Research ... In addition to the obvious security implications, businesses and the wider software engineering community also risk widespread IP theft - proprietary algorithms, for example, that might be implemented in Java could be easily reverse-engineered and copied.

Spatial Analysis of Macro Economic in Central Java (PDRB Analysis in Year 1993-2003

Directory of Open Access Journals (Sweden)

Eddy Kiswanto

2016-12-01

Full Text Available This paper aims to study the spatial analysis macroeconomics condition in central Java from 1993-2001 base on PDRB analysis. Central Java stands in the last position in the economic in Central Java based on PDRB variable and economic growth is in the lowest category in the comparation with another provinces in Java. This is reason why Central Java is categorized as "LL" (Low low. One of the prime sectors in Central Java is small medium scale enterprises which is dominated 30% of national market, but since the economic crisis stroke in 1997 the manufacture sector, especially industry and processing had collapse. In 1996-1997, the level of manufacture growth increased to 14.4% but then decreased until minus 19.3%. This condition caused by bankruptcy to many of the industries. The poverty profile in Central Java from 1999-2003 is average 23.3% from the total population every years. Central Java stepping to number 2 in level of poverty absolute number 1. In poverty relativity level, Central Java became number 1 in Java from 2002-2003 with the level of poverty reached above the national average. This fact shows the unsuccessfully effort in reducing the poverty level.

Multi-Language Programming Environments for High Performance Java Computing

Directory of Open Access Journals (Sweden)

Vladimir Getov

1999-01-01

Full Text Available Recent developments in processor capabilities, software tools, programming languages and programming paradigms have brought about new approaches to high performance computing. A steadfast component of this dynamic evolution has been the scientific community’s reliance on established scientific packages. As a consequence, programmers of high‐performance applications are reluctant to embrace evolving languages such as Java. This paper describes the Java‐to‐C Interface (JCI tool which provides application programmers wishing to use Java with immediate accessibility to existing scientific packages. The JCI tool also facilitates rapid development and reuse of existing code. These benefits are provided at minimal cost to the programmer. While beneficial to the programmer, the additional advantages of mixed‐language programming in terms of application performance and portability are addressed in detail within the context of this paper. In addition, we discuss how the JCI tool is complementing other ongoing projects such as IBM’s High‐Performance Compiler for Java (HPCJ and IceT’s metacomputing environment.

Protected Objects in Java

DEFF Research Database (Denmark)

Løvengreen, Hans Henrik; Schwarzer, Jens Christian

1998-01-01

We present an implementation of Ada 95's notion of protected objects in Java. The implementation comprises a class library supporting entry queues and a (pre-) compiler translating slightly decorated Java classes to pure Java classes utilizing the library.......We present an implementation of Ada 95's notion of protected objects in Java. The implementation comprises a class library supporting entry queues and a (pre-) compiler translating slightly decorated Java classes to pure Java classes utilizing the library....

A programming and a modelling perspective on the evaluation of Java Card implementations

OpenAIRE

Hartel, Pieter H.; de Jong, E.; de Jong, Eduard; Attali, Isabelle; Jensen, Thomas

2000-01-01

Java Card Technology has provided a huge step forward in programming smart cards: from assembler to using a high level Object Oriented language. However, the authors have found some differences between the current Java Card version (2.1) and main stream Java that may restrict the benefits of using Java achievable in smartcard programming. In particular, efforts towards evaluating Java Card implementations at a high level of assurance may be hampered by the presence of these differences as wel...

Formalizing the Safety of Java, the Java Virtual Machine and Java Card

NARCIS (Netherlands)

Hartel, Pieter H.; Moreau, Luc

2001-01-01

We review the existing literature on Java safety, emphasizing formal approaches, and the impact of Java safety on small footprint devices such as smart cards. The conclusion is that while a lot of good work has been done, a more concerted effort is needed to build a coherent set of machine readable

Some measurements of Java-to-bytecode compiler performance in the Java Virtual Machine

OpenAIRE

Daly, Charles; Horgan, Jane; Power, James; Waldron, John

2001-01-01

In this paper we present a platform independent analysis of the dynamic profiles of Java programs when executing on the Java Virtual Machine. The Java programs selected are taken from the Java Grande Forum benchmark suite, and five different Java-to-bytecode compilers are analysed. The results presented describe the dynamic instruction usage frequencies.

HALO--a Java framework for precise transcript half-life determination.

Science.gov (United States)

Friedel, Caroline C; Kaufmann, Stefanie; Dölken, Lars; Zimmer, Ralf

2010-05-01

Recent improvements in experimental technologies now allow measurements of de novo transcription and/or RNA decay at whole transcriptome level and determination of precise transcript half-lives. Such transcript half-lives provide important insights into the regulation of biological processes and the relative contributions of RNA decay and de novo transcription to differential gene expression. In this article, we present HALO (Half-life Organizer), the first software for the precise determination of transcript half-lives from measurements of RNA de novo transcription or decay determined with microarrays or RNA-seq. In addition, methods for quality control, filtering and normalization are supplied. HALO provides a graphical user interface, command-line tools and a well-documented Java application programming interface (API). Thus, it can be used both by biologists to determine transcript half-lives fast and reliably with the provided user interfaces as well as software developers integrating transcript half-life analysis into other gene expression profiling pipelines. Source code, executables and documentation are available at http://www.bio.ifi.lmu.de/software/halo.

Multimedia consultation session recording and playback using Java-based browser in global PACS

Science.gov (United States)

Martinez, Ralph; Shah, Pinkesh J.; Yu, Yuan-Pin

1998-07-01

The current version of the Global PACS software system uses a Java-based implementation of the Remote Consultation and Diagnosis (RCD) system. The Java RCD includes a multimedia consultation session between physicians that includes text, static image, image annotation, and audio data. The JAVA RCD allows 2-4 physicians to collaborate on a patient case. It allows physicians to join the session via WWW Java-enabled browsers or stand alone RCD application. The RCD system includes a distributed database archive system for archiving and retrieving patient and session data. The RCD system can be used for store and forward scenarios, case reviews, and interactive RCD multimedia sessions. The RCD system operates over the Internet, telephone lines, or in a private Intranet. A multimedia consultation session can be recorded, and then played back at a later time for review, comments, and education. A session can be played back using Java-enabled WWW browsers on any operating system platform. The JAVA RCD system shows that a case diagnosis can be captured digitally and played back with the original real-time temporal relationships between data streams. In this paper, we describe design and implementation of the RCD session playback.

Access Control of Web- and Java-Based Applications

Science.gov (United States)

Tso, Kam S.; Pajevski, Michael J.

2013-01-01

Cybersecurity has become a great concern as threats of service interruption, unauthorized access, stealing and altering of information, and spreading of viruses have become more prevalent and serious. Application layer access control of applications is a critical component in the overall security solution that also includes encryption, firewalls, virtual private networks, antivirus, and intrusion detection. An access control solution, based on an open-source access manager augmented with custom software components, was developed to provide protection to both Web-based and Javabased client and server applications. The DISA Security Service (DISA-SS) provides common access control capabilities for AMMOS software applications through a set of application programming interfaces (APIs) and network- accessible security services for authentication, single sign-on, authorization checking, and authorization policy management. The OpenAM access management technology designed for Web applications can be extended to meet the needs of Java thick clients and stand alone servers that are commonly used in the JPL AMMOS environment. The DISA-SS reusable components have greatly reduced the effort for each AMMOS subsystem to develop its own access control strategy. The novelty of this work is that it leverages an open-source access management product that was designed for Webbased applications to provide access control for Java thick clients and Java standalone servers. Thick clients and standalone servers are still commonly used in businesses and government, especially for applications that require rich graphical user interfaces and high-performance visualization that cannot be met by thin clients running on Web browsers

DESARROLLO DE UN SOFTWARE BASADO EN JAVA CAPAZ DE INTERPRETAR TRAZAS DE ARCHIVOS GENERADOS POR NS-2

Directory of Open Access Journals (Sweden)

Fredy Pachón Barbera

2013-09-01

Full Text Available En la simulación de una red de datos, se trata de evaluar, investigar y/o analizar su comportamiento  en un ambiente real, siempre buscando la optimización los recursos. El análisis de la información es un punto clave para conocer fortalezas y debilidades de la red simulada. El objetivo de este artículo es mostrar el desarrollo de una herramienta de interpretación de trazas generadas por NS-2 basado en el lenguaje de programación Java  y las variables estadísticas que se tuvieron en cuenta para la implementación, con el fin de facilitar el análisis de redes simuladas con la herramienta network simluator. Finalmente se logra la construcción del software, logrando determinar los cálculos de jitter, throughput y bytes enviados por cada nodo, a partir de las trazas generadas por NS-2.

JANIS-2: An Improved Version of the NEA Java-based Nuclear Data Information System

International Nuclear Information System (INIS)

Soppera, N.; Henriksson, H.; Nagel, P.; Nouri, A.; Dupont, E.

2005-01-01

JANIS (JAva-based Nuclear Information Software) is a display program designed to facilitate the visualisation and manipulation of nuclear data. Its objective is to allow the user of nuclear data to access numerical and graphical representations without prior knowledge of the storage format. It offers maximum flexibility for the comparison of different nuclear data sets. Features included in the latest release are described such as direct access to centralised databases through JAVA Servlet technology

ROOT I/O in JavaScript

Science.gov (United States)

Bellenot, Bertrand; Linev, Sergey

2014-06-01

In order to be able to browse (inspect) ROOT files in a platform independent way, a JavaScript version of the ROOT I/O subsystem has been developed. This allows the content of ROOT files to be displayed in most available web browsers, without having to install ROOT or any other software on the server or on the client. This gives a direct access to ROOT files from any new device in a lightweight way. It is possible to display simple graphical objects such as histograms and graphs (TH1, TH2, TH3, TProfile, and TGraph). The rendering of 1D/2D histograms and graphs is done with an external JavaScript library (D3.js), and another library (Three.js) is used for 2D and 3D histograms. We will describe the techniques used to display the content of a ROOT file, with a rendering being now very close to the one provided by ROOT.

ROOT I/O in JavaScript

International Nuclear Information System (INIS)

Bellenot, Bertrand; Linev, Sergey

2014-01-01

In order to be able to browse (inspect) ROOT files in a platform independent way, a JavaScript version of the ROOT I/O subsystem has been developed. This allows the content of ROOT files to be displayed in most available web browsers, without having to install ROOT or any other software on the server or on the client. This gives a direct access to ROOT files from any new device in a lightweight way. It is possible to display simple graphical objects such as histograms and graphs (TH1, TH2, TH3, TProfile, and TGraph). The rendering of 1D/2D histograms and graphs is done with an external JavaScript library (D3.js), and another library (Three.js) is used for 2D and 3D histograms. We will describe the techniques used to display the content of a ROOT file, with a rendering being now very close to the one provided by ROOT.

JavaScript DNA translator: DNA-aligned protein translations.

Science.gov (United States)

Perry, William L

2002-12-01

There are many instances in molecular biology when it is necessary to identify ORFs in a DNA sequence. While programs exist for displaying protein translations in multiple ORFs in alignment with a DNA sequence, they are often expensive, exist as add-ons to software that must be purchased, or are only compatible with a particular operating system. JavaScript DNA Translator is a shareware application written in JavaScript, a scripting language interpreted by the Netscape Communicator and Internet Explorer Web browsers, which makes it compatible with several different operating systems. While the program uses a familiar Web page interface, it requires no connection to the Internet since calculations are performed on the user's own computer. The program analyzes one or multiple DNA sequences and generates translations in up to six reading frames aligned to a DNA sequence, in addition to displaying translations as separate sequences in FASTA format. ORFs within a reading frame can also be displayed as separate sequences. Flexible formatting options are provided, including the ability to hide ORFs below a minimum size specified by the user. The program is available free of charge at the BioTechniques Software Library (www.Biotechniques.com).

Ivor Horton's Beginning Java

CERN Document Server

Horton, Ivor

2011-01-01

Find out why thousands have turned to Ivor Horton for learning Java Ivor Horton's approach is teaching Java is so effective and popular that he is one of the leading authors of introductory programming tutorials, with over 160,000 copies of his Java books sold. In this latest edition, whether you're a beginner or an experienced programmer switching to Java, you'll learn how to build real-world Java applications using Java SE 7. The author thoroughly covers the basics as well as new features such as extensions and classes; extended coverage of the Swing Application Framework; and he does it all

Java servlet programming

CERN Document Server

Hunter, Jason

2001-01-01

Servlets are an exciting and important technology that ties Java to the Web, allowing programmers to write Java programs that create dynamic web content. Java Servlet Programming covers everything Java developers need to know to write effective servlets. It explains the servlet lifecycle, showing how to use servlets to maintain state information effortlessly. It also describes how to serve dynamic web content, including both HTML pages and multimedia data, and explores more advanced topics like integrated session tracking, efficient database connectivity using JDBC, applet-servlet communicat

JAVA Stereo Display Toolkit

Science.gov (United States)

Edmonds, Karina

2008-01-01

This toolkit provides a common interface for displaying graphical user interface (GUI) components in stereo using either specialized stereo display hardware (e.g., liquid crystal shutter or polarized glasses) or anaglyph display (red/blue glasses) on standard workstation displays. An application using this toolkit will work without modification in either environment, allowing stereo software to reach a wider audience without sacrificing high-quality display on dedicated hardware. The toolkit is written in Java for use with the Swing GUI Toolkit and has cross-platform compatibility. It hooks into the graphics system, allowing any standard Swing component to be displayed in stereo. It uses the OpenGL graphics library to control the stereo hardware and to perform the rendering. It also supports anaglyph and special stereo hardware using the same API (application-program interface), and has the ability to simulate color stereo in anaglyph mode by combining the red band of the left image with the green/blue bands of the right image. This is a low-level toolkit that accomplishes simply the display of components (including the JadeDisplay image display component). It does not include higher-level functions such as disparity adjustment, 3D cursor, or overlays all of which can be built using this toolkit.

Teaching Software Componentization: A Bar Chart Java Bean

Science.gov (United States)

Mitri, Michel

2010-01-01

In the current object-oriented paradigm, software construction increasingly involves creating and utilizing "software components". These components can serve a variety of functions, from common algorithmic processes to database connectivity to graphical interfaces. The advantage of component architectures is that programmers can use pre-existing…

Java/JNI/C/Fortran makefile project for a Java plug-in and related Android app in Eclipse ADT bundle : A side-by-side comparison

NARCIS (Netherlands)

De Beer, R.; Van Ormondt, D.

2015-01-01

We have developed a Java/Fortran based application, called MonteCarlo, that enables the users can carry out Monte Carlo studies in the field of in vivo MRS. The application is supposed to be used as a tool for the jMRUI platform, being the in vivo MRS software system of the TRANSACT European Union

Java 8 recipes

CERN Document Server

Dea, Carl; Guime, Freddy; OConner, John; Juneau, Josh

2014-01-01

Java 8 Recipes offers solutions to common programming problems encountered while developing Java-based applications. Fully updated with the newest features and techniques available, Java 8 Recipes provides code examples involving Lambdas, embedded scripting with Nashorn, the new date-time API, stream support, functional interfaces, and much more. Especial emphasis is given to features such as lambdas that are newly introduced in Java 8. Content is presented in the popular problem-solution format: Look up the programming problem that you want to solve. Read the solution. Apply the solution dir

JavaScript Patterns

CERN Document Server

Stefanov, Stoyan

2010-01-01

What's the best approach for developing an application with JavaScript? This book helps you answer that question with numerous JavaScript coding patterns and best practices. If you're an experienced developer looking to solve problems related to objects, functions, inheritance, and other language-specific categories, the abstractions and code templates in this guide are ideal -- whether you're writing a client-side, server-side, or desktop application with JavaScript. Written by JavaScript expert Stoyan Stefanov -- Senior Yahoo! Technical and architect of YSlow 2.0, the web page performance

Correlation Between Coupling Metrics Values and Number of Classes in Multimedia Java Projects: A Case Study

Directory of Open Access Journals (Sweden)

V. S. Bivde

2016-09-01

Full Text Available Coupling is an interdependence relationship between the modules of object-oriented software. It is a property with the most influence on quality attributes of the object-oriented software. Coupling with high values results in complex software design hence software professionals try to keep the coupling as low as possible. The values of coupling metrics are dependent on the type of input source code. Reusability is the main feature of object-oriented languages, so coupling occurs due to reuse of code modules. This paper investigates a correlation between the values of coupling metrics and the number of classes in the multimedia Java code. Here, a case study of a banking multimedia Java project with its forty different versions is conducted to comments on this correlation. The analysis of the results shows that, if the input source code is with a large number of classes then it results in high coupling values.

Development of Farm Records Software

Directory of Open Access Journals (Sweden)

M. S. Abubakar

2017-12-01

Full Text Available Farm records are mostly manually kept on paper notebooks and folders where similar records are organized in one folder or spread sheet. These records are usually kept for many years therefore they becomes bulky and less organized. Consequently, it becomes difficult to search, update and tedious and time consuming to manage these records. This study was carried-out to overcome these problems associated with manual farm records keeping by developing user-friendly, easily accessible, reliable and secured software. The software was limited records keeping in crop production, livestock production, poultry production, employees, income and expenditure. The system was implemented using Java Server Faces (JSF for designing Graphical User Interface (GUI, Enterprises Java Beans (EJB for logic tier and MySQL database for storing farm records.

FastaValidator: an open-source Java library to parse and validate FASTA formatted sequences.

Science.gov (United States)

Waldmann, Jost; Gerken, Jan; Hankeln, Wolfgang; Schweer, Timmy; Glöckner, Frank Oliver

2014-06-14

Advances in sequencing technologies challenge the efficient importing and validation of FASTA formatted sequence data which is still a prerequisite for most bioinformatic tools and pipelines. Comparative analysis of commonly used Bio*-frameworks (BioPerl, BioJava and Biopython) shows that their scalability and accuracy is hampered. FastaValidator represents a platform-independent, standardized, light-weight software library written in the Java programming language. It targets computer scientists and bioinformaticians writing software which needs to parse quickly and accurately large amounts of sequence data. For end-users FastaValidator includes an interactive out-of-the-box validation of FASTA formatted files, as well as a non-interactive mode designed for high-throughput validation in software pipelines. The accuracy and performance of the FastaValidator library qualifies it for large data sets such as those commonly produced by massive parallel (NGS) technologies. It offers scientists a fast, accurate and standardized method for parsing and validating FASTA formatted sequence data.

Java RMI

CERN Document Server

Grosso, William

2002-01-01

Java RMI contains a wealth of experience in designing and implementing Java's Remote Method Invocation. If you're a novice reader, you will quickly be brought up to speed on why RMI is such a powerful yet easy to use tool for distributed programming, while experts can gain valuable experience for constructing their own enterprise and distributed systems. With Java RMI, you'll learn tips and tricks for making your RMI code excel. The book also provides strategies for working with serialization, threading, the RMI registry, sockets and socket factories, activation, dynamic class downloading,

The Java Legacy Interface

DEFF Research Database (Denmark)

Korsholm, Stephan

2007-01-01

The Java Legacy Interface is designed to use Java for encapsulating native legacy code on small embedded platforms. We discuss why existing technologies for encapsulating legacy code (JNI) is not sufficient for an important range of small embedded platforms, and we show how the Java Legacy...... Interface offers this previously missing functionality. We describe an implementation of the Java Legacy Interface for a particular virtual machine, and how we have used this virtual machine to integrate Java with an existing, commercial, soft real-time, C/C++ legacy platform....

Java development in MDSplus

International Nuclear Information System (INIS)

Barana, O.; Luchetta, A.; Manduchi, G.; Taliercio, C.

2002-01-01

This paper describes the new Java components of MDSplus. These tools represent the evolution of some MDSplus components (MDSplus Current Developments and Future Directions, this conference) previously written in C, taking advantage from the multiplatform interoperability provided by the Java framework. The use of Java in the development of these tools provided an impressive reduction in the coding and test time. This is mainly due to the large set of ready-to-use components of the Java framework, and to the effective code re-use which can be achieved in the organization of Java applications

An evaluation of safety-critical Java on a Java processor

OpenAIRE

Rios Rivas, Juan Ricardo; Schoeberl, Martin

2014-01-01

The safety-critical Java (SCJ) specification provides a restricted set of the Java language intended for applications that require certification. In order to test the specification, implementations are emerging and the need to evaluate those implementations in a systematic way is becoming important. In this paper we evaluate our SCJ implementation which is based on the Java Optimized Processor JOP and we measure different performance and timeliness criteria relevant to hard real-time systems....

Java The Good Parts

CERN Document Server

Waldo, Jim

2010-01-01

What if you could condense Java down to its very best features and build better applications with that simpler version? In this book, veteran Sun Labs engineer Jim Waldo reveals which parts of Java are most useful, and why those features make Java among the best programming languages available. Every language eventually builds up crud, Java included. The core language has become increasingly large and complex, and the libraries associated with it have grown even more. Learn how to take advantage of Java's best features by working with an example application throughout the book. You may not l

Java EE 7 first look

CERN Document Server

Fabrice, Armel

2013-01-01

An easy-to-follow guide to reveal the new features of Java EE 7 and how to efficiently utilize them.Given the main objectives pursued, this book targets three groups of people with a knowledge of the Java language. They are:Beginners in the Java EE platform who would like to have an idea about the main specifications of Java EE 7.Developers who have experimented with previous versions of Java EE and who would like to explore the new features of Java EE 7.Building architects who want to learn how to put together the various Java EE 7 specifications for building robust and secure enterprise appl

Simulating a Rotational Inverted Pendulum Model by using Matlab and Easy Java Simulations

Directory of Open Access Journals (Sweden)

Oscar O. Rodríguez-Díaz

2012-06-01

Full Text Available This paper presents the analysis, design and construction of a virtual simulator, in which the behavior of a non-lineal system as the rotational inverted pendulum is represented graphically in an interface. This uses an Applet of Java that allows users change parameters of the model. The use of this tool is a good alternative for bridging the gap between the theoretical concepts and the actual behaviors of a process. The server uses Matlab/Simulink as a calculation engine, taking advantage of its ease for constructing non-lineal models by using block diagrams. The user interface has been created by a free software tool called Easy Java Simulations that allows designing interactive graphical applications as 3D interfaces. Easy Java results an interesting tool for automatic control system education.

Java Swing

CERN Document Server

Loy, Marc; Eckstein, Robert; Elliott, James; Wood, Dave

2003-01-01

Swing is a fully-featured user interface development kit for Java applications. Building on the foundations of the Abstract Window Toolkit (AWT), Swing enables cross-platform applications to use any of several pluggable look-and-feels. Swing developers can take advantage of its rich, flexible features and modular components, building elegant user interfaces with very little code. This second edition of Java Swing thoroughly covers all the features available in Java 2 SDK 1.3 and 1.4. More than simply a reference, this new edition takes a practical approach. It is a book by developers for

Java Persistence Dengan JBoss Seam

OpenAIRE

Utomo, Wiranto Herry; Istiyanto, Jazi Eko

2009-01-01

Seam is based on Java EE, so it satisfies its framework duties in two fundamental ways: 1) Seam  simplifies Java EE: Seam provides a number of  shortcuts and  simplifications  to  the standard  Java EE  framework, making  it  even  easier  to  effectively  use  Java EE web  and business components, 2) Seam extends Java EE: Seam integrates a number of new concepts and tools into the Java EE framework. These extensions b...

Automating the management of software projects in a developing IT ...

African Journals Online (AJOL)

The resultant network-based software tool was developed on object-oriented technology using Java. The study established that good management practices may still be applied by the Nigerian software industry that lacks expertise in software management. Multi-site development approach facilitates large projects by using ...

DESENVOLVIMENTO DE UMA FERRAMENTA ASSISTENTE PARA CRIAÇÃO DE APLICAÇÕES CRUD EM JAVA NA WEB

Directory of Open Access Journals (Sweden)

Carlos Renato de Souza Perri

2010-12-01

Full Text Available Due to the need for computerization of business processes, storage of relevant information in databases and making these information available on Internet, this project proposes to develop a tool for generating Web applications written in Java, that build functionalities to perform CRUD (Create, Retrieve, Update, Delete, ie, storage, read, update and deletion. The software is a tool, from which, the programmer inserts the script to create a database and, after setting the parameters into the tool, source code of Java Web applications are generated. There is a need to create Web applications in Java with low production time, because building these applications using common methods for development takes much time. The implementation of this tool is also to change that concept and the way of developing Java Web applications, because this tool will be used as an assistant, becoming easier to create Java Web applications. The generated applications use the technologies Servlets and JSPs, the Hibernate framework and the jQuery JavaScript library.

Activity, exposure rate and spectrum prediction with Java programming

International Nuclear Information System (INIS)

Sahin, D.; Uenlue, K.

2009-01-01

In order to envision the radiation exposure during Neutron Activation Analysis (NAA) experiments, a software called Activity Predictor is developed using Java TM programming language. The Activity Predictor calculates activities, exposure rates and gamma spectra of activated samples for NAA experiments performed at Radiation Science and Engineering Center (RSEC), Penn State Breazeale Reactor (PSBR). The calculation procedure for predictions involves both analytical and Monte Carlo methods. The Activity Predictor software is validated with a series of activation experiments. It has been found that Activity Predictor software calculates the activities and exposure rates precisely. The software also predicts gamma spectrum for each measurement. The predicted spectra agreed partially with measured spectra. The error in net photo peak areas varied from 4.8 to 51.29%, which is considered to be due to simplistic modeling, statistical fluctuations and unknown contaminants in the samples. (author)

JavaScript programmer's reference

CERN Document Server

Valentine, Thomas

2013-01-01

JavaScript Programmer's Reference is an invaluable resource that won't stray far from your desktop (or your tablet!). It contains detailed information on every JavaScript object and command, and combines that reference with practical examples showcasing how you can use those commands in the real world. Whether you're just checking the syntax of a method or you're starting out on the road to JavaScript mastery, the JavaScript Programmer's Reference will be an essential aid.  With a detailed and informative tutorial section giving you the ins and outs of programming with JavaScript and the DOM f

Glotaran: A Java-Based Graphical User Interface for the R Package TIMP

NARCIS (Netherlands)

Snellenburg, J.J.; Laptenok, S.; Seger, R.; Mullen, K.M.; van Stokkum, I.H.M.

2012-01-01

In this work the software application called Glotaran is introduced as a Java-based graphical user interface to the R package TIMP, a problem solving environment for fitting superposition models to multi-dimensional data. TIMP uses a command-line user interface for the interaction with data, the

Learning JavaScript

CERN Document Server

Powers, Shelley

2008-01-01

Packed with best practices and examples of JavaScript use, Learning JavaScript provides complete, no-nonsense coverage of this quirky yet essential language for web development. You'll learn everything from primitive data types to complex features, including JavaScript elements involved with Ajax and dynamic page effects. By the end of the book, you'll be able to work with even the most sophisticated libraries and web applications.

Hardware Support for Embedded Java

DEFF Research Database (Denmark)

Schoeberl, Martin

2012-01-01

The general Java runtime environment is resource hungry and unfriendly for real-time systems. To reduce the resource consumption of Java in embedded systems, direct hardware support of the language is a valuable option. Furthermore, an implementation of the Java virtual machine in hardware enables...... worst-case execution time analysis of Java programs. This chapter gives an overview of current approaches to hardware support for embedded and real-time Java....

Crosstalk: The Journal of Defense Software Engineering. Volume 22, Number 2, February 2009

Science.gov (United States)

2009-02-01

possible system attacks. by Ron Greenfield and Dr. Charley Tichenor Enforcing Static Program Properties to Enable Safety-Critical Use of Java Software...Assurance by Ron Greenfield and Dr. Charley Tichenor, and Dr. Kelvin Nilsen’s Enforcing Static Program Properties in Safety-Critical Java Software Components...01&lang=en>. 5. Shakespeare, William. The Tempest. 6. Intel. “How Chips are Made.” 2008 <www.intel.com/ education /making chips/preparation.htm>. 7

JavaScript for Absolute Beginners

CERN Document Server

McNavage, T

2010-01-01

If you are new to both JavaScript and programming, this hands-on book is for you. Rather than staring blankly at gobbledygook, you'll explore JavaScript by entering and running hundreds of code samples in Firebug, a free JavaScript debugger. Then in the last two chapters, you'll leave the safety of Firebug and hand-code an uber cool JavaScript application in your preferred text editor. Written in a friendly, engaging narrative style, this innovative JavaScript tutorial covers the following essentials: * Core JavaScript syntax, such as value types, operators, expressions, and statements provide

Safety-critical Java for low-end embedded platforms

DEFF Research Database (Denmark)

Søndergaard, Hans; Korsholm, Stephan E.; Ravn, Anders Peter

2012-01-01

We present an implementation of the Safety-Critical Java profile (SCJ), targeted for low-end embedded platforms with as little as 16 kB RAM and 256 kB flash. The distinctive features of the implementation are a combination of a lean Java virtual machine (HVM), with a bare metal kernel implementing...... hardware objects, first level interrupt handlers, and native variables, and an infrastructure written in Java which is minimized through program specialization. The HVM allows the implementation to be easily ported to embedded platforms which have a C compiler as part of the development environment...

Fundamentals of multicore software development

CERN Document Server

Pankratius, Victor; Tichy, Walter F

2011-01-01

With multicore processors now in every computer, server, and embedded device, the need for cost-effective, reliable parallel software has never been greater. By explaining key aspects of multicore programming, Fundamentals of Multicore Software Development helps software engineers understand parallel programming and master the multicore challenge. Accessible to newcomers to the field, the book captures the state of the art of multicore programming in computer science. It covers the fundamentals of multicore hardware, parallel design patterns, and parallel programming in C++, .NET, and Java. It

A Resilience Pattern in Village level: The Case Babalan Village, Pati, Central Java Indonesia

OpenAIRE

Nurwahyudi Ragil; Maryono Maryono

2018-01-01

Based on the Indonesia Disaster Prone Index 2013, Pati Regency is a high risk area of disaster and is ranked 11th level Central Java province while nationally ranked 156. Babalan Village located on the edge of Juwana River has disaster history from 2006-2014 shows flood disaster Giving the greatest probability and impact followed by rat pest, tornado, drought, fire. The public recognizes the signs of a continuous flooding of heavy rains accompanied by clouds all over the edge, the continuous ...

Model Checking JAVA Programs Using Java Pathfinder

Science.gov (United States)

Havelund, Klaus; Pressburger, Thomas

2000-01-01

This paper describes a translator called JAVA PATHFINDER from JAVA to PROMELA, the "programming language" of the SPIN model checker. The purpose is to establish a framework for verification and debugging of JAVA programs based on model checking. This work should be seen in a broader attempt to make formal methods applicable "in the loop" of programming within NASA's areas such as space, aviation, and robotics. Our main goal is to create automated formal methods such that programmers themselves can apply these in their daily work (in the loop) without the need for specialists to manually reformulate a program into a different notation in order to analyze the program. This work is a continuation of an effort to formally verify, using SPIN, a multi-threaded operating system programmed in Lisp for the Deep-Space 1 spacecraft, and of previous work in applying existing model checkers and theorem provers to real applications.

A Java-based electronic healthcare record software for beta-thalassaemia.

Science.gov (United States)

Deftereos, S; Lambrinoudakis, C; Andriopoulos, P; Farmakis, D; Aessopos, A

2001-01-01

Beta-thalassaemia is a hereditary disease, the prevalence of which is high in persons of Mediterranean, African, and Southeast Asian ancestry. In Greece it constitutes an important public health problem. Beta-thalassaemia necessitates continuous and complicated health care procedures such as daily chelation; biweekly transfusions; and periodic cardiology, endocrinology, and hepatology evaluations. Typically, different care items are offered in different, often-distant, health care units, which leads to increased patient mobility. This is especially true in rural areas. Medical records of patients suffering from beta-thalassaemia are inevitably complex and grow in size very fast. They are currently paper-based, scattered over all units involved in the care process. This hinders communication of information between health care professionals and makes processing of the medical records difficult, thus impeding medical research. Our objective is to provide an electronic means for recording, communicating, and processing all data produced in the context of the care process of patients suffering from beta-thalassaemia. We have developed - and we present in this paper - Java-based Electronic Healthcare Record (EHCR) software, called JAnaemia. JAnaemia is a general-purpose EHCR application, which can be customized for use in all medical specialties. Customization for beta-thalassaemia has been performed in collaboration with 4 Greek hospitals. To be capable of coping with patient record diversity, JAnaemia has been based on the EHCR architecture proposed in the ENV 13606:1999 standard, published by the CEN/TC251 committee. Compliance with the CEN architecture also ensures that several additional requirements are fulfilled in relation to clinical comprehensiveness; to record sharing and communication; and to ethical, medico-legal, and computational issues. Special care has been taken to provide a user-friendly, form-based interface for data entry and processing. The

Scala for Java developers

CERN Document Server

Alexandre, Thomas

2014-01-01

This step-by-step guide is full of easy-to-follow code taken from real-world examples explaining the migration and integration of Scala in a Java project. If you are a Java developer or a Java architect, working in Java EE-based solutions and want to start using Scala in your daily programming, this book is ideal for you. This book will get you up and running quickly by adopting a pragmatic approach with real-world code samples. No prior knowledge of Scala is required.

Software architecture design patterns in Java

CERN Document Server

Kuchana, Partha

2004-01-01

AN INTRODUCTION TO DESIGN PATTERNSDesign Patterns: Origin and HistoryArchitectural to Software Design PatternsWhat is a Design Pattern?More about Design PatternsAbout This BookUNIFIED MODELING LANGUAGE (UML)UML: A Quick ReferenceClass DiagramsSequence diagramsBASIC PATTERNSInterfaceDescriptionExamplePractice QuestionsAbstract Parent ClassDescriptionExamplePractice QuestionsPrivate MethodsDescriptionExamplePractice QuestionsAccessor MethodsDescriptionAccessor Method NomenclatureExampleDirect Reference versus Accessor MethodsPractice QuestionsConstant Data ManagerDescriptionExamplePractice Quest

Multi-Language Programming Environments for High Performance Java Computing

OpenAIRE

Vladimir Getov; Paul Gray; Sava Mintchev; Vaidy Sunderam

1999-01-01

Recent developments in processor capabilities, software tools, programming languages and programming paradigms have brought about new approaches to high performance computing. A steadfast component of this dynamic evolution has been the scientific community’s reliance on established scientific packages. As a consequence, programmers of high‐performance applications are reluctant to embrace evolving languages such as Java. This paper describes the Java‐to‐C Interface (JCI) tool which provides ...

Reusable libraries for safety-critical Java

DEFF Research Database (Denmark)

Rios Rivas, Juan Ricardo; Schoeberl, Martin

2014-01-01

The large collection of Java class libraries is a main factor of the success of Java. However, these libraries assume that a garbage-collected heap is used. Safety-critical Java uses scope-based memory areas instead of a garbage-collected heap. Therefore, the Java class libraries are problematic...... to use in safety-critical Java. We have identified common programming patterns in the Java class libraries that make them unsuitable for safety-critical Java. We propose ways to improve the libraries to avoid the impact of the identified problematic patterns. We illustrate these changes by implementing...

Beginning Java' and Flex Migrating Java, Spring, Hibernate and Maven Developers to Adobe Flex

CERN Document Server

di Pisa, F

2009-01-01

Over the past few years, the now open source Adobe Flex Framework has been adopted by the Java community as the preferred framework for Java RIAs using Flash for the presentation layer. Flex helps Java developers to build and maintain expressive web/desktop applications that deploy consistently on all major browsers, desktops, and operating systems. Beginning Java and Flex describes new, simpler, and faster ways to develop enterprise RIAs. This book is not only for Java or Flex developers, but also for all web developers who want to increase their productivity and the quality of their developm

Schedulability Analysis for Java Finalizers

DEFF Research Database (Denmark)

Bøgholm, Thomas; Hansen, Rene Rydhof; Søndergaard, Hans

2010-01-01

Java finalizers perform clean-up and finalisation of objects at garbage collection time. In real-time Java profiles the use of finalizers is either discouraged (RTSJ, Ravenscar Java) or even disallowed (JSR-302), mainly because of the unpredictability of finalizers and in particular their impact...... on the schedulability analysis. In this paper we show that a controlled scoped memory model results in a structured and predictable execution of finalizers, more reminiscent of C++ destructors than Java finalizers. Furthermore, we incorporate finalizers into a (conservative) schedulability analysis for Predictable Java...... programs. Finally, we extend the SARTS tool for automated schedulability analysis of Java bytecode programs to handle finalizers in a fully automated way....

Modular VO oriented Java EE service deployer

Science.gov (United States)

Molinaro, Marco; Cepparo, Francesco; De Marco, Marco; Knapic, Cristina; Apollo, Pietro; Smareglia, Riccardo

2014-07-01

The International Virtual Observatory Alliance (IVOA) has produced many standards and recommendations whose aim is to generate an architecture that starts from astrophysical resources, in a general sense, and ends up in deployed consumable services (that are themselves astrophysical resources). Focusing on the Data Access Layer (DAL) system architecture, that these standards define, in the last years a web based application has been developed and maintained at INAF-OATs IA2 (Italian National institute for Astrophysics - Astronomical Observatory of Trieste, Italian center of Astronomical Archives) to try to deploy and manage multiple VO (Virtual Observatory) services in a uniform way: VO-Dance. However a set of criticalities have arisen since when the VO-Dance idea has been produced, plus some major changes underwent and are undergoing at the IVOA DAL layer (and related standards): this urged IA2 to identify a new solution for its own service layer. Keeping on the basic ideas from VO-Dance (simple service configuration, service instantiation at call time and modularity) while switching to different software technologies (e.g. dismissing Java Reflection in favour of Enterprise Java Bean, EJB, based solution), the new solution has been sketched out and tested for feasibility. Here we present the results originating from this test study. The main constraints for this new project come from various fields. A better homogenized solution rising from IVOA DAL standards: for example the new DALI (Data Access Layer Interface) specification that acts as a common interface system for previous and oncoming access protocols. The need for a modular system where each component is based upon a single VO specification allowing services to rely on common capabilities instead of homogenizing them inside service components directly. The search for a scalable system that takes advantage from distributed systems. The constraints find answer in the adopted solutions hereafter sketched. The

Novel plasmids and resistance phenotypes in Yersinia pestis: unique plasmid inventory of strain Java 9 mediates high levels of arsenic resistance.

Science.gov (United States)

Eppinger, Mark; Radnedge, Lyndsay; Andersen, Gary; Vietri, Nicholas; Severson, Grant; Mou, Sherry; Ravel, Jacques; Worsham, Patricia L

2012-01-01

Growing evidence suggests that the plasmid repertoire of Yersinia pestis is not restricted to the three classical virulence plasmids. The Java 9 strain of Y. pestis is a biovar Orientalis isolate obtained from a rat in Indonesia. Although it lacks the Y. pestis-specific plasmid pMT, which encodes the F1 capsule, it retains virulence in mouse and non-human primate animal models. While comparing diverse Y. pestis strains using subtractive hybridization, we identified sequences in Java 9 that were homologous to a Y. enterocolitica strain carrying the transposon Tn2502, which is known to encode arsenic resistance. Here we demonstrate that Java 9 exhibits high levels of arsenic and arsenite resistance mediated by a novel promiscuous class II transposon, named Tn2503. Arsenic resistance was self-transmissible from Java 9 to other Y. pestis strains via conjugation. Genomic analysis of the atypical plasmid inventory of Java 9 identified pCD and pPCP plasmids of atypical size and two previously uncharacterized cryptic plasmids. Unlike the Tn2502-mediated arsenic resistance encoded on the Y. enterocolitica virulence plasmid; the resistance loci in Java 9 are found on all four indigenous plasmids, including the two novel cryptic plasmids. This unique mobilome introduces more than 105 genes into the species gene pool. The majority of these are encoded by the two entirely novel self-transmissible plasmids, which show partial homology and synteny to other enterics. In contrast to the reductive evolution in Y. pestis, this study underlines the major impact of a dynamic mobilome and lateral acquisition in the genome evolution of the plague bacterium.

Novel plasmids and resistance phenotypes in Yersinia pestis: unique plasmid inventory of strain Java 9 mediates high levels of arsenic resistance.

Directory of Open Access Journals (Sweden)

Mark Eppinger

Full Text Available Growing evidence suggests that the plasmid repertoire of Yersinia pestis is not restricted to the three classical virulence plasmids. The Java 9 strain of Y. pestis is a biovar Orientalis isolate obtained from a rat in Indonesia. Although it lacks the Y. pestis-specific plasmid pMT, which encodes the F1 capsule, it retains virulence in mouse and non-human primate animal models. While comparing diverse Y. pestis strains using subtractive hybridization, we identified sequences in Java 9 that were homologous to a Y. enterocolitica strain carrying the transposon Tn2502, which is known to encode arsenic resistance. Here we demonstrate that Java 9 exhibits high levels of arsenic and arsenite resistance mediated by a novel promiscuous class II transposon, named Tn2503. Arsenic resistance was self-transmissible from Java 9 to other Y. pestis strains via conjugation. Genomic analysis of the atypical plasmid inventory of Java 9 identified pCD and pPCP plasmids of atypical size and two previously uncharacterized cryptic plasmids. Unlike the Tn2502-mediated arsenic resistance encoded on the Y. enterocolitica virulence plasmid; the resistance loci in Java 9 are found on all four indigenous plasmids, including the two novel cryptic plasmids. This unique mobilome introduces more than 105 genes into the species gene pool. The majority of these are encoded by the two entirely novel self-transmissible plasmids, which show partial homology and synteny to other enterics. In contrast to the reductive evolution in Y. pestis, this study underlines the major impact of a dynamic mobilome and lateral acquisition in the genome evolution of the plague bacterium.

Supporting Multiprocessors in the Icecap Safety-Critical Java Run-Time Environment

DEFF Research Database (Denmark)

Zhao, Shuai; Wellings, Andy; Korsholm, Stephan Erbs

The current version of the Safety Critical Java (SCJ) specification defines three compliance levels. Level 0 targets single processor programs while Level 1 and 2 can support multiprocessor platforms. Level 1 programs must be fully partitioned but Level 2 programs can also be more globally...... scheduled. As of yet, there is no official Reference Implementation for SCJ. However, the icecap project has produced a Safety-Critical Java Run-time Environment based on the Hardware-near Virtual Machine (HVM). This supports SCJ at all compliance levels and provides an implementation of the safety......-critical Java (javax.safetycritical) package. This is still work-in-progress and lacks certain key features. Among these is the ability to support multiprocessor platforms. In this paper, we explore two possible options to adding multiprocessor support to this environment: the “green thread” and the “native...

Software refactoring at the package level using clustering techniques

KAUST Repository

Alkhalid, A.

2011-01-01

Enhancing, modifying or adapting the software to new requirements increases the internal software complexity. Software with high level of internal complexity is difficult to maintain. Software refactoring reduces software complexity and hence decreases the maintenance effort. However, software refactoring becomes quite challenging task as the software evolves. The authors use clustering as a pattern recognition technique to assist in software refactoring activities at the package level. The approach presents a computer aided support for identifying ill-structured packages and provides suggestions for software designer to balance between intra-package cohesion and inter-package coupling. A comparative study is conducted applying three different clustering techniques on different software systems. In addition, the application of refactoring at the package level using an adaptive k-nearest neighbour (A-KNN) algorithm is introduced. The authors compared A-KNN technique with the other clustering techniques (viz. single linkage algorithm, complete linkage algorithm and weighted pair-group method using arithmetic averages). The new technique shows competitive performance with lower computational complexity. © 2011 The Institution of Engineering and Technology.

Software refactoring at the package level using clustering techniques

KAUST Repository

Alkhalid, A.; Alshayeb, M.; Mahmoud, S. A.

2011-01-01

Enhancing, modifying or adapting the software to new requirements increases the internal software complexity. Software with high level of internal complexity is difficult to maintain. Software refactoring reduces software complexity and hence

BPEL and Java cookbook

CERN Document Server

Laznik, Jurij

2013-01-01

The book is written in a Cookbook format with practical recipes aimed at helping you extend BPEL capabilities with Java.This book is aimed at Java developers who use BPEL programming to develop web services in SOA development. It is assumed that the readers are experienced with Java programming and SOA, but knowledge of BPEL is not necessarily required.

The JET level-1 software

International Nuclear Information System (INIS)

McCullen, P.A.; Farthing, J.W.

1998-01-01

The complex nature of the JET machine requires a large amount of control parameter preparation, selection and validation before a pulse may be started. Level-1 is defined as the centralized, cross-subsystem control of JET. Before it was introduced over 10 years ago, the Session Leader (SL) who is responsible for specifying the parameter settings for a JET pulse, had virtually no software available to help him except for a simple editor used for the creation of control waveforms. Most of the required parameter settings were calculated by hand and then passed on either verbally or via hand-written forms. These parameters were then set by a large number of people - Local Unit Responsible Officers (LUROs) and CODAS Duty Officers (CDOs) using a wide selection of dedicated software. At this time the Engineer in Charge (EiC) would largely depend on the LUROs to inform him that conditions were ready. He never set control parameters personally and had little or no software available to him to see what many of the settings were. The first implementation of Level-1 software went some way towards improving the task of pulse schedule preparation in that the SL could specify his requirements via a computer interface and store them in a database for later use. At that time the maximum number of parameters that could be handled was 500. (author)

Safety-critical Java on a time-predictable processor

DEFF Research Database (Denmark)

Korsholm, Stephan E.; Schoeberl, Martin; Puffitsch, Wolfgang

2015-01-01

For real-time systems the whole execution stack needs to be time-predictable and analyzable for the worst-case execution time (WCET). This paper presents a time-predictable platform for safety-critical Java. The platform consists of (1) the Patmos processor, which is a time-predictable processor......; (2) a C compiler for Patmos with support for WCET analysis; (3) the HVM, which is a Java-to-C compiler; (4) the HVM-SCJ implementation which supports SCJ Level 0, 1, and 2 (for both single and multicore platforms); and (5) a WCET analysis tool. We show that real-time Java programs translated to C...... and compiled to a Patmos binary can be analyzed by the AbsInt aiT WCET analysis tool. To the best of our knowledge the presented system is the second WCET analyzable real-time Java system; and the first one on top of a RISC processor....

Sawja: Static Analysis Workshop for Java

Science.gov (United States)

Hubert, Laurent; Barré, Nicolas; Besson, Frédéric; Demange, Delphine; Jensen, Thomas; Monfort, Vincent; Pichardie, David; Turpin, Tiphaine

Static analysis is a powerful technique for automatic verification of programs but raises major engineering challenges when developing a full-fledged analyzer for a realistic language such as Java. Efficiency and precision of such a tool rely partly on low level components which only depend on the syntactic structure of the language and therefore should not be redesigned for each implementation of a new static analysis. This paper describes the Sawja library: a static analysis workshop fully compliant with Java 6 which provides OCaml modules for efficiently manipulating Java bytecode programs. We present the main features of the library, including i) efficient functional data-structures for representing a program with implicit sharing and lazy parsing, ii) an intermediate stack-less representation, and iii) fast computation and manipulation of complete programs. We provide experimental evaluations of the different features with respect to time, memory and precision.

A predictable Java profile

DEFF Research Database (Denmark)

Bøgholm, Thomas; Hansen, Rene Rydhof; Ravn, Anders Peter

2009-01-01

A Java profile suitable for development of high integrity embedded systems is presented. It is based on event handlers which are grouped in missions and equipped with respectively private handler memory and shared mission memory. This is a result of our previous work on developing a Java profile......, and is directly inspired by interactions with the Open Group on their on-going work on a safety critical Java profile (JSR-302). The main contribution is an arrangement of the class hierarchy such that the proposal is a generalization of Real-Time Specification for Java (RTSJ). A further contribution...

Pro JavaScript with MooTools

CERN Document Server

Obcena, Mark Joseph

2010-01-01

Pro JavaScript with MooTools is unlike any other JavaScript book on the market today. While similar books focus on either JavaScript as a language of the browser or how to use JavaScript frameworks, Pro JavaScript with MooTools fills the gap between these topics and moves beyond - exploring the advanced features of JavaScript and how the MooTools framework uses these features to further improve the language itself. The book itself takes a unique three-pronged approach. It first walks you through the advanced features of JavaScript and the MooTools framework, including native augmentation and t

Java Programming Language

Science.gov (United States)

Shaykhian, Gholam Ali

2007-01-01

The Java seminar covers the fundamentals of Java programming language. No prior programming experience is required for participation in the seminar. The first part of the seminar covers introductory concepts in Java programming including data types (integer, character, ..), operators, functions and constants, casts, input, output, control flow, scope, conditional statements, and arrays. Furthermore, introduction to Object-Oriented programming in Java, relationships between classes, using packages, constructors, private data and methods, final instance fields, static fields and methods, and overloading are explained. The second part of the seminar covers extending classes, inheritance hierarchies, polymorphism, dynamic binding, abstract classes, protected access. The seminar conclude by introducing interfaces, properties of interfaces, interfaces and abstract classes, interfaces and cailbacks, basics of event handling, user interface components with swing, applet basics, converting applications to applets, the applet HTML tags and attributes, exceptions and debugging.

A programming and a modelling perspective on the evaluation of Java Card implementations

NARCIS (Netherlands)

Hartel, Pieter H.; de Jong, E.; de Jong, Eduard; Attali, Isabelle; Jensen, Thomas

Java Card Technology has provided a huge step forward in programming smart cards: from assembler to using a high level Object Oriented language. However, the authors have found some differences between the current Java Card version (2.1) and main stream Java that may restrict the benefits of using

JANIS 4: An Improved Version of the NEA Java-based Nuclear Data Information System

International Nuclear Information System (INIS)

Soppera, N.; Bossant, M.; Dupont, E.

2014-01-01

JANIS is software developed to facilitate the visualization and manipulation of nuclear data, giving access to evaluated data libraries, and to the EXFOR and CINDA databases. It is stand-alone Java software, downloadable from the web and distributed on DVD. Used offline, the system also makes use of an internet connection to access the NEA Data Bank database. It is now also offered as a full web application, only requiring a browser. The features added in the latest version of the software and this new web interface are described

JavaScript The Definitive Guide

CERN Document Server

Flanagan, David

2011-01-01

Since 1996, JavaScript: The Definitive Guide has been the bible for JavaScript programmers-a programmer's guide and comprehensive reference to the core language and to the client-side JavaScript APIs defined by web browsers. The 6th edition covers HTML5 and ECMAScript 5. Many chapters have been completely rewritten to bring them in line with today's best web development practices. New chapters in this edition document jQuery and server side JavaScript. It's recommended for experienced programmers who want to learn the programming language of the Web, and for current JavaScript programmers wh

Java programming 24-hour trainer

CERN Document Server

Fain, Yakov

2015-01-01

Quick and painless Java programming with expert multimedia instruction Java Programming 24-Hour Trainer, 2nd Edition is your complete beginner's guide to the Java programming language, with easy-to-follow lessons and supplemental exercises that help you get up and running quickly. Step-by-step instruction walks you through the basics of object-oriented programming, syntax, interfaces, and more, before building upon your skills to develop games, web apps, networks, and automations. This second edition has been updated to align with Java SE 8 and Java EE 7, and includes new information on GUI b

Tatool: a Java-based open-source programming framework for psychological studies.

Science.gov (United States)

von Bastian, Claudia C; Locher, André; Ruflin, Michael

2013-03-01

Tatool (Training and Testing Tool) was developed to assist researchers with programming training software, experiments, and questionnaires. Tatool is Java-based, and thus is a platform-independent and object-oriented framework. The architecture was designed to meet the requirements of experimental designs and provides a large number of predefined functions that are useful in psychological studies. Tatool comprises features crucial for training studies (e.g., configurable training schedules, adaptive training algorithms, and individual training statistics) and allows for running studies online via Java Web Start. The accompanying "Tatool Online" platform provides the possibility to manage studies and participants' data easily with a Web-based interface. Tatool is published open source under the GNU Lesser General Public License, and is available at www.tatool.ch.

Conceptual study of the application software manager using the Xlet model in the nuclear fields

Energy Technology Data Exchange (ETDEWEB)

Lee, Joon Koo; Park, Heui Youn; Koo, In Soo [KAERI, Taejon (Korea, Republic of); Park, Hee Seok; Kim, Jung Seon; Sohn, Chang Ho [Samchang Enterprise Co., Ltd., Taejon (Korea, Republic of)

2003-10-01

In order to reduce the cost of software maintenance including software modification, we suggest the object oriented program with checking the version of application program using the Java language and the technique of executing the downloaded application program via network using the application manager. In order to change the traditional scheduler to the application manager we have adopted the Xlet concept in the nuclear fields using the network. In usual Xlet means a Java application that runs on the digital television receiver. The Java TV Application Program Interface(API) defines an application model called the Xlet application lifecycle. Java applications that use this lifecycle model are called Xlets. The Xlet application lifecycle is compatible with the existing application environment and virtual machine technology. The Xlet application lifecycle model defines the dialog (protocol) between an Xlet and its environment.

Conceptual study of the application software manager using the Xlet model in the nuclear fields

International Nuclear Information System (INIS)

Lee, Joon Koo; Park, Heui Youn; Koo, In Soo; Park, Hee Seok; Kim, Jung Seon; Sohn, Chang Ho

2003-01-01

In order to reduce the cost of software maintenance including software modification, we suggest the object oriented program with checking the version of application program using the Java language and the technique of executing the downloaded application program via network using the application manager. In order to change the traditional scheduler to the application manager we have adopted the Xlet concept in the nuclear fields using the network. In usual Xlet means a Java application that runs on the digital television receiver. The Java TV Application Program Interface(API) defines an application model called the Xlet application lifecycle. Java applications that use this lifecycle model are called Xlets. The Xlet application lifecycle is compatible with the existing application environment and virtual machine technology. The Xlet application lifecycle model defines the dialog (protocol) between an Xlet and its environment

Assessing Students' Structured Programming Skills with Java: The "Blue, Berry, and Blueberry" Assignment

Science.gov (United States)

Zhang, Xihui

2010-01-01

Java is an object-oriented programming language. From a software engineering perspective, object-oriented design and programming is used at the architectural design, and structured design and programming is used at the detailed design within methods. As such, structured programming skills are fundamental to more advanced object-oriented…

Software reuse example and challenges at NSIDC

Science.gov (United States)

Billingsley, B. W.; Brodzik, M.; Collins, J. A.

2009-12-01

NSIDC has created a new data discovery and access system, Searchlight, to provide users with the data they want in the format they want. NSIDC Searchlight supports discovery and access to disparate data types with on-the-fly reprojection, regridding and reformatting. Architected to both reuse open source systems and be reused itself, Searchlight reuses GDAL and Proj4 for manipulating data and format conversions, the netCDF Java library for creating netCDF output, MapServer and OpenLayers for defining spatial criteria and the JTS Topology Suite (JTS) in conjunction with Hibernate Spatial for database interaction and rich OGC-compliant spatial objects. The application reuses popular Java and Java Script libraries including Struts 2, Spring, JPA (Hibernate), Sitemesh, JFreeChart, JQuery, DOJO and a PostGIS PostgreSQL database. Future reuse of Searchlight components is supported at varying architecture levels, ranging from the database and model components to web services. We present the tools, libraries and programs that Searchlight has reused. We describe the architecture of Searchlight and explain the strategies deployed for reusing existing software and how Searchlight is built for reuse. We will discuss NSIDC reuse of the Searchlight components to support rapid development of new data delivery systems.

A Java Reference Model of Transacted Memory for Smart Cards

NARCIS (Netherlands)

Poll, Erik; Hartel, Pieter H.; de Jong, Eduard

Transacted Memory offers persistence, undoability and auditing. We present a Java/JML Reference Model of the Transacted Memory system on the basis of our earlier separate Z model and C implementation. We conclude that Java/JML combines the advantages of a high level specification in the JML part

A Java Reference Model of Transacted Memory for Smart Cards

NARCIS (Netherlands)

Poll, Erik; Hartel, Pieter H.; de Jong, Eduard

2002-01-01

Transacted Memory offers persistence, undoability and auditing. We present a Java/JML Reference Model of the Transacted Memory system on the basis of our earlier separate Z model and C implementation. We conclude that Java/JML combines the advantages of a high level specification in the JML part

Functional-light JavaScript balanced, pragmatic FP in JavaScript

CERN Document Server

Simpson, Kyle

2017-01-01

Functional-Light JavaScript is a balanced, pragmatic exploration of Functional Programming in JavaScript. Functional Programming (FP) is an incredibly powerful paradigm for structuring code that yields more robust, verifiable, and readable programs. If you've ever tried to learn FP but struggled with terms like "monad", mathematical concepts like category theory, or symbols like (lambda), you're not alone. Functional-Light programming distills the most vital aspects of FP—function purity, value immutability, composition, and more!—down to approachable JavaScript patterns. Rather than the all-or-nothing dogmatism often encountered in FP, this book teaches you how to improve your programs line by line.

Communicating Java Threads

NARCIS (Netherlands)

Hilderink, G.H.; Broenink, Johannes F.; Vervoort, Wiek; Bakkers, André; Bakkers, A.

The incorporation of multithreading in Java may be considered a significant part of the Java language, because it provides udimentary facilities for concurrent programming. However, we belief that the use of channels is a fundamental concept for concurrent programming. The channel approach as

A knowledge discovery object model API for Java

Directory of Open Access Journals (Sweden)

Jones Steven JM

2003-10-01

Full Text Available Abstract Background Biological data resources have become heterogeneous and derive from multiple sources. This introduces challenges in the management and utilization of this data in software development. Although efforts are underway to create a standard format for the transmission and storage of biological data, this objective has yet to be fully realized. Results This work describes an application programming interface (API that provides a framework for developing an effective biological knowledge ontology for Java-based software projects. The API provides a robust framework for the data acquisition and management needs of an ontology implementation. In addition, the API contains classes to assist in creating GUIs to represent this data visually. Conclusions The Knowledge Discovery Object Model (KDOM API is particularly useful for medium to large applications, or for a number of smaller software projects with common characteristics or objectives. KDOM can be coupled effectively with other biologically relevant APIs and classes. Source code, libraries, documentation and examples are available at http://www.bcgsc.ca/bioinfo/software.

Java and Mac OS X

CERN Document Server

Davis, T Gene

2010-01-01

Learn the guidelines of integrating Java with native Mac OS X applications with this Devloper Reference book. Java is used to create nearly every type of application that exists and is one of the most required skills of employers seeking computer programmers. Java code and its libraries can be integrated with Mac OS X features, and this book shows you how to do just that. You'll learn to write Java programs on OS X and you'll even discover how to integrate them with the Cocoa APIs.: Shows how Java programs can be integrated with any Mac OS X feature, such as NSView widgets or screen savers; Re

A real-time Java tool chain for resource constrained platforms

DEFF Research Database (Denmark)

Korsholm, Stephan Erbs; Søndergaard, Hans; Ravn, Anders P.

2013-01-01

The Java programming language was originally developed for embedded systems, but the resource requirements of previous and current Java implementations - especially memory consumption - tend to exclude them from being used on a significant class of resource constrained embedded platforms. The con......The Java programming language was originally developed for embedded systems, but the resource requirements of previous and current Java implementations - especially memory consumption - tend to exclude them from being used on a significant class of resource constrained embedded platforms...... by integrating: (1) a lean virtual machine (HVM) without any external dependencies on POSIX-like libraries or other OS functionalities, (2) a hardware abstraction layer, implemented almost entirely in Java through the use of hardware objects, first level interrupt handlers, and native variables, and (3....... An evaluation of the presented solution shows that the miniCDj benchmark gets reduced to a size where it can run on resource constrained platforms....

Java performance tuning

CERN Document Server

Shirazi, Jack

2003-01-01

Performance has been an important issue for Java developers ever since the first version hit the streets. Over the years, Java performance has improved dramatically, but tuning is essential to get the best results, especially for J2EE applications. You can never have code that runs too fast. Java Peformance Tuning, 2nd edition provides a comprehensive and indispensable guide to eliminating all types of performance problems. Using many real-life examples to work through the tuning process in detail, JPT shows how tricks such as minimizing object creation and replacing strings with arrays can

Mastering JavaScript high performance

CERN Document Server

Adams, Chad R

2015-01-01

If you are a JavaScript developer with some experience in development and want to increase the performance of JavaScript projects by building faster web apps, then this book is for you. You should know the basic concepts of JavaScript.

Synthèse de gestionnaires mémoire pour applications Java temps-réel embarquées

OpenAIRE

Salagnac , Guillaume

2008-01-01

In this thesis, we address the problem of dynamic memory management in real-time embedded Java systems. When programming in C or C++, all memory management is done explicitly by the programmer, inducing numerous execution faults because of hazardous use of memory operations. This greatly increases software development costs, because such errors are very hard to debug. The Java language tackles this problem by offering automatic memory management, thanks to the use of a garbage collector. Howe...

Visualizing systems engineering data with Java

International Nuclear Information System (INIS)

Barter, R; Vinzant, A.

1998-01-01

Systems Engineers are required to deal with complex sets of data. To be useful, the data must be managed effectively, and presented in meaningful terms to a wide variety of information consumers. Two software patterns are presented as the basis for exploring the visualization of systems engineering data. The Model, View, Controller pattern defines an information management system architecture. The Entity, Relation, Attribute pattern defines the information model. MVC Views then form the basis for the user interface between the information consumer and the MVC Controller/Model combination. A Java tool set is described for exploring alternative views into the underlying complex data structures encountered in systems engineering

Memory Management for Safety-Critical Java

DEFF Research Database (Denmark)

Schoeberl, Martin

2011-01-01

Safety-Critical Java (SCJ) is based on the Real-Time Specification for Java. To simplify the certification of Java programs, SCJ supports only a restricted scoped memory model. Individual threads share only immortal memory and the newly introduced mission memory. All other scoped memories...... implementation is evaluated on an embedded Java processor....

Safety-critical Java for embedded systems

DEFF Research Database (Denmark)

Schoeberl, Martin; Dalsgaard, Andreas Engelbredt; Hansen, René Rydhof

2016-01-01

This paper presents the motivation for and outcomes of an engineering research project on certifiable Javafor embedded systems. The project supports the upcoming standard for safety-critical Java, which defines asubset of Java and libraries aiming for development of high criticality systems....... The outcome of this projectinclude prototype safety-critical Java implementations, a time-predictable Java processor, analysis tools formemory safety, and example applications to explore the usability of safety-critical Java for this applicationarea. The text summarizes developments and key contributions...

A real-time Java tool chain for resource constrained platforms

DEFF Research Database (Denmark)

Korsholm, Stephan E.; Søndergaard, Hans; Ravn, Anders Peter

2014-01-01

The Java programming language was originally developed for embedded systems, but the resource requirements of previous and current Java implementations – especially memory consumption – tend to exclude them from being used on a significant class of resource constrained embedded platforms. The con......The Java programming language was originally developed for embedded systems, but the resource requirements of previous and current Java implementations – especially memory consumption – tend to exclude them from being used on a significant class of resource constrained embedded platforms...... by integrating the following: (1) a lean virtual machine without any external dependencies on POSIX-like libraries or other OS functionalities; (2) a hardware abstraction layer, implemented almost entirely in Java through the use of hardware objects, first level interrupt handlers, and native variables; and (3....... An evaluation of the presented solution shows that the miniCDj benchmark gets reduced to a size where it can run on resource constrained platforms....

JavaFX' Special Effects Taking Java RIA to the Extreme with Animation, Multimedia, and Game Elements

CERN Document Server

Jordon, L

2009-01-01

Enough about learning the fundamentals of the intriguing JavaFX platform; it's now time to start implementing visually stunning and dynamic Java-based rich Internet applications (RIAs) for your desktop or mobile front end. This book will show you what the JavaFX platform can really do for Java desktop and mobile front ends. It presents a number of excellent visual effects and techniques that will make any JavaFX application stand out-whether it's animation, multimedia, or a game. The techniques shown in this book are invaluable for competing in today's market, and they'll help set your RIAs ap

RAY TRACING IMPLEMENTATION IN JAVA PROGRAMMING LANGUAGE

Directory of Open Access Journals (Sweden)

Aybars UĞUR

2002-01-01

Full Text Available In this paper realism in computer graphics and components providing realism are discussed at first. It is mentioned about illumination models, surface rendering methods and light sources for this aim. After that, ray tracing which is a technique for creating two dimensional image of a three-dimensional virtual environment is explained briefly. A simple ray tracing algorithm was given. "SahneIzle" which is a ray tracing program implemented in Java programming language which can be used on the internet is introduced. As a result, importance of network-centric ray tracing software is discussed.

Java problem-based learning

Directory of Open Access Journals (Sweden)

Goran P, Šimić

2012-01-01

Full Text Available The paper describes the self-directed problem-based learning system (PBL named Java PBL. The expert module is the kernel of Java PBL. It involves a specific domain model, a problem generator and a solution generator. The overall system architecture is represented in the paper. Java PBL can act as the stand-alone system, but it is also designed to provide support to learning management systems (LMSs. This is provided by a modular design of the system. An LMS can offer the declarative knowledge only. Java PBL offers the procedural knowledge and the progress of the learner programming skills. The free navigation, unlimited numbers of problems and recommendations represent the main pedagogical strategies and tactics implemented into the system.

Recent Developments in Low-Level Software Security

OpenAIRE

Agten , Pieter; Nikiforakis , Nick; Strackx , Raoul; Groef , Willem ,; Piessens , Frank

2012-01-01

Part 1: Keynotes; International audience; An important objective for low-level software security research is to develop techniques that make it harder to launch attacks that exploit implementation details of the system under attack. Baltopoulos and Gordon have summarized this as the principle of source-based reasoning for security: security properties of a software system should follow from review of the source code and its source-level semantics, and should not depend on details of the compi...

The effect of green supply chain management implementation to marketing performance through company competitiveness (study on paper industry in West Java)

Science.gov (United States)

Hijuzaman, O.; Rahayu, A.; Kusnendi

2018-05-01

The purpose of this study was to determine and analyze the effect of direct and indirect implementation of Green Supply-Chain Management (GSCM) on the Performance Marketing and Competitiveness Mediation Paper Company in West Java province. Object This research is the paper company that existed in West Java Province, which amounts to 30 companies as well as a sample of research, while variables studied are Variable Green Supply- Chain Management, Company Competitiveness Variable and Variable of Paper Marketing Industry Performance in West Java Province. The method used SEM with Variance Based or Component Based with Software used is SmartPLS 3.0. On this research are identified that no effect of Competitiveness on Marketing Performance in Paper Companies in West Java Province.

A Ravenscar-Java profile implementation

DEFF Research Database (Denmark)

Thomsen, Bent; Ravn, Anders Peter; Søndergaard, Hans

2006-01-01

This paper presents an implementation of the Ravenscar-Java profile. While most implementations of the profile are reference-implementations showing that it is possible to implement the profile, our implementation is aimed at industrial applications. It uses a dedicated real-time Java processor......, since we want to investigate if the Ravenscar-Java profile, implemented on a Java processor, is efficient for real applications. During the implementation some ambiguities and weaknesses of the profile were uncovered. However, test examples indicate that the profile is suitable for development...... of realistic real-time programs....

Professional Java EE design patterns

CERN Document Server

Yener, Murat

2014-01-01

Master Java EE design pattern implementation to improve your design skills and your application's architecture Professional Java EE Design Patterns is the perfect companion for anyone who wants to work more effectively with Java EE, and the only resource that covers both the theory and application of design patterns in solving real-world problems. The authors guide readers through both the fundamental and advanced features of Java EE 7, presenting patterns throughout, and demonstrating how they are used in day-to-day problem solving. As the most popular programming language in community-dri

Essential Java for Scientists and Engineers

CERN Document Server

Hahn, Brian D; Malan, Katherine M

2003-01-01

Essential Java serves as an introduction to the programming language, Java, for scientists and engineers, and can also be used by experienced programmers wishing to learn Java as an additional language. The book focuses on how Java, and object-oriented programming, can be used to solve science and engineering problems. Many examples are included from a number of different scientific and engineering areas, as well as from business and everyday life. Pre-written packages of code are provided to help in such areas as input/output, matrix manipulation and scientific graphing. Java source code and

Improvements for Optics Measurement and Corrections software

CERN Document Server

Bach, T

2013-01-01

This note presents the improvements for the OMC software during a 14 month technical student internship at CERN. The goal of the work was to improve existing software in terms of maintainability, features and performance. Significant improvements in stability, speed and overall development process were reached. The main software, a Java GUI at the LHC CCC, run for months without noteworthy problems. The overall running time of the software chain used for optics corrections was reduced from nearly half an hour to around two minutes. This was the result of analysing and improving several involved programs and algorithms.

The definitive guide to Jython Python for the Java platform

CERN Document Server

Juneau, Josh; Ng, Victor; Soto, Leo; Wierzbicki, Frank

2010-01-01

Jython is an open source implementation of the high-level, dynamic, object-oriented scripting language Python seamlessly integrated with the Java platform. The predecessor to Jython, JPython, is certified as 100% Pure Java. Jython is freely available for both commercial and noncommercial use and is distributed with source code. Jython is complementary to Java. The Definitive Guide to Jython, written by the official Jython team leads, covers the latest Jython 2.5 (or 2.5.x) from the basics to the advanced features. This book begins with a brief introduction to the language and then journeys thr

Beginning programming with Java for dummies

CERN Document Server

Burd, Barry

2014-01-01

A practical introduction to programming with Java Beginning Programming with Java For Dummies, 4th Edition is a comprehensive guide to learning one of the most popular programming languages worldwide. This book covers basic development concepts and techniques through a Java lens. You'll learn what goes into a program, how to put the pieces together, how to deal with challenges, and how to make it work. The new Fourth Edition has been updated to align with Java 8, and includes new options for the latest tools and techniques. Java is the predominant language used to program Android and cloud app

Beginning Programming with Java For Dummies

CERN Document Server

Burd, Barry

2012-01-01

One of the most popular beginning programming books, now fully updated Java is a popular language for beginning programmers, and earlier editions of this fun and friendly guide have helped thousands get started. Now fully revised to cover recent updates for Java 7.0, Beginning Programming with Java For Dummies, 3rd Edition is certain to put more first-time programmers and Java beginners on the road to Java mastery.Explores what goes into creating a program, putting the pieces together, dealing with standard programming challenges, debugging, and making the program work Offers new options for

JavaScript programming pushing the limits

CERN Document Server

Raasch, Jon

2013-01-01

Take your JavaScript knowledge as far as it can go JavaScript has grown up, and it's a hot topic. Newer and faster JavaScript VMs and frameworks built upon them have increased the popularity of JavaScript for server-side web applications, and rich JS applications are being developed for mobile devices. This book delivers a compelling tutorial, showing you how to build a real-world app from the ground up. Experienced developers who want to master the latest techniques and redefine their skills will find this deep dive into JavaScript's hidden functionalities gives them the tools to

Professional JavaScript for Web Developers

CERN Document Server

Zakas, Nicholas C

2011-01-01

A significant update to a bestselling JavaScript book As the key scripting language for the web, JavaScript is supported by every modern web browser and allows developers to create client-side scripts that take advantage of features such as animating the canvas tag and enabling client-side storage and application caches. After an in-depth introduction to the JavaScript language, this updated edition of a bestseller progresses to break down how JavaScript is applied for web development using the latest web development technologies. Veteran author and JavaScript guru Nicholas Zakas shows how Jav

Java 7 A Beginner's Tutorial

CERN Document Server

Kurniawan, Budi

2011-01-01

A Books24x7's TOP 10 title for 4 consecutive years! Java is an easy language to learn. However, you need to master more than the language syntax to be a professional Java programmer. For one, object-oriented programming (OOP) skill is key to developing robust and effective Java applications. In addition, knowing how to use the vast collection of libraries makes development more rapid. This book introduces you to important programming concepts and teaches how to use the Java core libraries. It is a guide to building real-world applications, both desktop and Web-based. The coverage is the

Network-based analysis of software change propagation.

Science.gov (United States)

Wang, Rongcun; Huang, Rubing; Qu, Binbin

2014-01-01

The object-oriented software systems frequently evolve to meet new change requirements. Understanding the characteristics of changes aids testers and system designers to improve the quality of softwares. Identifying important modules becomes a key issue in the process of evolution. In this context, a novel network-based approach is proposed to comprehensively investigate change distributions and the correlation between centrality measures and the scope of change propagation. First, software dependency networks are constructed at class level. And then, the number of times of cochanges among classes is minded from software repositories. According to the dependency relationships and the number of times of cochanges among classes, the scope of change propagation is calculated. Using Spearman rank correlation analyzes the correlation between centrality measures and the scope of change propagation. Three case studies on java open source software projects Findbugs, Hibernate, and Spring are conducted to research the characteristics of change propagation. Experimental results show that (i) change distribution is very uneven; (ii) PageRank, Degree, and CIRank are significantly correlated to the scope of change propagation. Particularly, CIRank shows higher correlation coefficient, which suggests it can be a more useful indicator for measuring the scope of change propagation of classes in object-oriented software system.

Java Processor Optimized for RTSJ

Directory of Open Access Journals (Sweden)

Tu Shiliang

2007-01-01

Full Text Available Due to the preeminent work of the real-time specification for Java (RTSJ, Java is increasingly expected to become the leading programming language in real-time systems. To provide a Java platform suitable for real-time applications, a Java processor which can execute Java bytecode is directly proposed in this paper. It provides efficient support in hardware for some mechanisms specified in the RTSJ and offers a simpler programming model through ameliorating the scoped memory of the RTSJ. The worst case execution time (WCET of the bytecodes implemented in this processor is predictable by employing the optimization method proposed in our previous work, in which all the processing interfering predictability is handled before bytecode execution. Further advantage of this method is to make the implementation of the processor simpler and suited to a low-cost FPGA chip.

Static Analysis for JavaScript

DEFF Research Database (Denmark)

Jensen, Simon Holm

. This dissertation describes the design and implementation of a static analysis for JavaScript that can assist programmers in finding bugs in code during development. We describe the design of a static analysis tool for JavaScript, built using the monotone framework. This analysis infers detailed type information......Web applications present unique challenges to designers of static analysis tools. One of these challenges is the language JavaScript used for client side scripting in the browser. JavaScript is a complex language with many pitfalls and poor tool support compared to other languages...... about programs. This information can be used to detect bugs such as null pointer dereferences and unintended type coercions. The analysis is sound, enabling it to prove the absence of certain program errors. JavaScript is usually run within the context of the browser and the DOM API. The major...

Isolating and Restricting Client-Side JavaScript:Isoleren en beperken van JavaScript aan de cliëntzijde

OpenAIRE

Van Acker, Steven

2015-01-01

In today’s web applications, no one disputes the important role of JavaScript asa client-side programming language. JavaScript can turn the Web into a lively,dynamic and interactive end-user experience. Unfortunately, JavaScript canalso be used to steal sensitive information and abuse powerful functionality. Sloppy input validation can make a web application vulnerable, allowingmalicious JavaScript code to leak into a web application’s JavaScript executionenvironment, where it leads to un...

Checking Java Programs

CERN Document Server

Darwin, Ian

2007-01-01

This Short Cut tells you about tools that will improve the quality of your Java code, using checking above and beyond what the standard tools do, including: Using javac options, JUnit and assertions Making your IDE work harder Checking your source code with PMD Checking your compiled code (.class files) with FindBugs Checking your program's run-time behavior with Java PathFinder

Implementing the Gaia Astrometric Global Iterative Solution (AGIS) in Java

OpenAIRE

O'Mullane, William; Lammers, Uwe; Lindegren, Lennart; Hernandez, Jose; Hobbs, David

2011-01-01

This paper provides a description of the Java software framework which has been constructed to run the Astrometric Global Iterative Solution for the Gaia mission. This is the mathematical framework to provide the rigid reference frame for Gaia observations from the Gaia data itself. This process makes Gaia a self calibrated, and input catalogue independent, mission. The framework is highly distributed typically running on a cluster of machines with a database back end. All code is written in ...

High Performance JavaScript

CERN Document Server

Zakas, Nicholas

2010-01-01

If you're like most developers, you rely heavily on JavaScript to build interactive and quick-responding web applications. The problem is that all of those lines of JavaScript code can slow down your apps. This book reveals techniques and strategies to help you eliminate performance bottlenecks during development. You'll learn how to improve execution time, downloading, interaction with the DOM, page life cycle, and more. Yahoo! frontend engineer Nicholas C. Zakas and five other JavaScript experts -- Ross Harmes, Julien Lecomte, Steven Levithan, Stoyan Stefanov, and Matt Sweeney -- demonstra

JavaScript Web Applications

CERN Document Server

MacCaw, Alex

2011-01-01

Building rich JavaScript applications that bring a desktop experience to the Web requires moving state from the server to the client side-not a simple task. This hands-on book takes proficient JavaScript developers through all the steps necessary to create state-of-the-art applications, including structure, templating, frameworks, communicating with the server, and many other issues. Throughout the book, you'll work with real-world example applications to help you grasp the concepts involved. Learn how to create JavaScript applications that offer a more responsive and improved experience. U

ADVANCED AND RAPID DEVELOPMENT OF DYNAMIC ANALYSIS TOOLS FOR JAVA

Directory of Open Access Journals (Sweden)

Alex Villazón

2012-01-01

Full Text Available Low-level bytecode instrumentation techniques are widely used in many software-engineering tools for the Java Virtual Machine (JVM, that perform some form of dynamic program analysis, such as profilers or debuggers. While program manipulation at the bytecode level is very flexible, because the possible bytecode transformations are not restricted, tool development based on this technique is tedious and error-prone. As a promising alternative, the specification of bytecode instrumentation at a higher level using aspect-oriented programming (AOP can reduce tool development time and cost. Unfortunately, prevailing AOP frameworks lack some features that are essential for certain dynamic analyses. In this article, we focus on three common shortcomings in AOP frameworks with respect to the development of aspect-based tools - (1 the lack of mechanisms for passing data between woven advices in local variables, (2 the support for user-defined static analyses at weaving time, and (3 the absence of pointcuts at the level of individual basic blocks of code. We propose @J, an annotation-based AOP language and weaver that integrates support for these three features. The benefits of the proposed features are illustrated with concrete examples.

Beginning Java- me platform

CERN Document Server

Rischpater, Ray

2008-01-01

Empowering developers with the flexibility and power to start building Java applications for their Java-enabled mobile device or cell phone, this book covers sound HTTPS support, user interface API enhancements, the Mobile Media API, the Game API, and more.

Pro JavaScript for web apps

CERN Document Server

Freeman, Adam

2012-01-01

JavaScript is the engine behind every web app, and a solid knowledge of it is essential for all modern web developers. Pro JavaScript for Web Apps gives you all of the information that you need to create professional, optimized, and efficient JavaScript applications that will run across all devices. It takes you through all aspects of modern JavaScript application creation, showing you how to combine JavaScript with the new features of HTML5 and CSS3 to make the most of the new web technologies. The focus of the book is on creating professional web applications, ensuring that your app provides

Instant web scraping with Java

CERN Document Server

Mitchell, Ryan

2013-01-01

This book is full of short, concise recipes to learn a variety of useful web scraping techniques using Java. You will start with a simple basic recipe of setting up your Java environment and gradually learn some more advanced recipes such as using complex Scrapers.Instant Web Scraping with Java is aimed at developers who, while not necessarily familiar with Java, are at least ready to dive into the complexities of this language with simple, step-by-step instructions leading the way. It is assumed that you have at least an intermediate knowledge of HTML, some knowledge of MySQL, and access to a

"Carbopolis": A Java Technology-Based Free Software for Environmental Education

Science.gov (United States)

Eichler, Marcelo Leandro; Xavier, Paulo Rafael; Araujo, Roberto Costa; Forte, Rafael Castro; Del Pino, Jose Claudio

2005-01-01

The goals of this paper are to describe some characteristics of the pedagogical project of the "Carbopolis" software and some programming solutions that were found during the computational implementation of this software. Relative to the first goal, some pedagogical features that are considered necessary to developing computerized learning…

Elementary study on γ analysis software for low level measurement

International Nuclear Information System (INIS)

Ruan Guanglin; Huang Xianguo; Xing Shixiong

2001-01-01

The difficulty in using fashion γ analysis software in low level measurement is discussed. The ROI report file of ORTEC operation system has been chosen as interface file to write γ analysis software for low-level measurement. The author gives software flowchart and applied example and discusses the existent problems

NINJA: Java for High Performance Numerical Computing

Directory of Open Access Journals (Sweden)

José E. Moreira

2002-01-01

Full Text Available When Java was first introduced, there was a perception that its many benefits came at a significant performance cost. In the particularly performance-sensitive field of numerical computing, initial measurements indicated a hundred-fold performance disadvantage between Java and more established languages such as Fortran and C. Although much progress has been made, and Java now can be competitive with C/C++ in many important situations, significant performance challenges remain. Existing Java virtual machines are not yet capable of performing the advanced loop transformations and automatic parallelization that are now common in state-of-the-art Fortran compilers. Java also has difficulties in implementing complex arithmetic efficiently. These performance deficiencies can be attacked with a combination of class libraries (packages, in Java that implement truly multidimensional arrays and complex numbers, and new compiler techniques that exploit the properties of these class libraries to enable other, more conventional, optimizations. Two compiler techniques, versioning and semantic expansion, can be leveraged to allow fully automatic optimization and parallelization of Java code. Our measurements with the NINJA prototype Java environment show that Java can be competitive in performance with highly optimized and tuned Fortran code.

APINetworks Java. A Java approach to the efficient treatment of large-scale complex networks

Science.gov (United States)

Muñoz-Caro, Camelia; Niño, Alfonso; Reyes, Sebastián; Castillo, Miriam

2016-10-01

We present a new version of the core structural package of our Application Programming Interface, APINetworks, for the treatment of complex networks in arbitrary computational environments. The new version is written in Java and presents several advantages over the previous C++ version: the portability of the Java code, the easiness of object-oriented design implementations, and the simplicity of memory management. In addition, some additional data structures are introduced for storing the sets of nodes and edges. Also, by resorting to the different garbage collectors currently available in the JVM the Java version is much more efficient than the C++ one with respect to memory management. In particular, the G1 collector is the most efficient one because of the parallel execution of G1 and the Java application. Using G1, APINetworks Java outperforms the C++ version and the well-known NetworkX and JGraphT packages in the building and BFS traversal of linear and complete networks. The better memory management of the present version allows for the modeling of much larger networks.

A Model for Java with Wildcards

DEFF Research Database (Denmark)

Cameron, Nicholas R.; Drossopoulou, Sophia; Ernst, Erik

2008-01-01

Wildcards are a complex and subtle part of the Java type system, present since version 5.0. Although there have been various formalisations and partial type soundness results concerning wildcards, to the best of our knowledge, no system that includes all the key aspects of Java wildcards has been...... proven type sound. This paper establishes that Java wildcards are type sound. We describe a new formal model based on explicit existential types whose pack and unpack operations are handled implicitly, and prove it type sound. Moreover, we specify a translation from a subset of Java to our formal model......, and discuss how several interesting aspects of the Java type system are handled....

Java online monitoring framework

International Nuclear Information System (INIS)

Ronan, M.; Kirkby, D.; Johnson, A.S.; Groot, D. de

1997-10-01

An online monitoring framework has been written in the Java Language Environment to develop applications for monitoring special purpose detectors during commissioning of the PEP-II Interaction Region. PEP-II machine parameters and signals from several of the commissioning detectors are logged through VxWorks/EPICS and displayed by Java display applications. Remote clients are able to monitor the machine and detector performance using graphical displays and analysis histogram packages. In this paper, the design and implementation of the object-oriented Java framework is described. Illustrations of data acquisition, display and histograming applications are also given

Cyclone: java-based querying and computing with Pathway/Genome databases.

Science.gov (United States)

Le Fèvre, François; Smidtas, Serge; Schächter, Vincent

2007-05-15

Cyclone aims at facilitating the use of BioCyc, a collection of Pathway/Genome Databases (PGDBs). Cyclone provides a fully extensible Java Object API to analyze and visualize these data. Cyclone can read and write PGDBs, and can write its own data in the CycloneML format. This format is automatically generated from the BioCyc ontology by Cyclone itself, ensuring continued compatibility. Cyclone objects can also be stored in a relational database CycloneDB. Queries can be written in SQL, and in an intuitive and concise object-oriented query language, Hibernate Query Language (HQL). In addition, Cyclone interfaces easily with Java software including the Eclipse IDE for HQL edition, the Jung API for graph algorithms or Cytoscape for graph visualization. Cyclone is freely available under an open source license at: http://sourceforge.net/projects/nemo-cyclone. For download and installation instructions, tutorials, use cases and examples, see http://nemo-cyclone.sourceforge.net.

Towards Type-Based Optimizations in Distributed Applications Using ABS and JAVA 8

NARCIS (Netherlands)

V.N. Serbanescu (Vlad); C. Nagarajagowda (Chetan); K. Azadbakht (Keyvan); F.S. de Boer (Frank); B. Nobakht (Behrooz); F. Pop; M. Potop-Butucaru

2014-01-01

htmlabstractIn this paper we present an API to support modeling applications with Actors based on the paradigm of the Abstract Behavioural Specification (ABS) language. With the introduction of JAVA 8, we expose this API through a JAVA library to allow for a high-level actor-based methodology for

Server Interface Descriptions for Automated Testing of JavaScript Web Applications

DEFF Research Database (Denmark)

Jensen, Casper Svenning; Møller, Anders; Su, Zhendong

2013-01-01

Automated testing of JavaScript web applications is complicated by the communication with servers. Specifically, it is difficult to test the JavaScript code in isolation from the server code and database contents. We present a practical solution to this problem. First, we demonstrate that formal...... server interface descriptions are useful in automated testing of JavaScript web applications for separating the concerns of the client and the server. Second, to support the construction of server interface descriptions for existing applications, we introduce an effective inference technique that learns...... communication patterns from sample data. By incorporating interface descriptions into the testing tool Artemis, our experimental results show that we increase the level of automation for high-coverage testing on a collection of JavaScript web applications that exchange JSON data between the clients and servers...

Graph Transforming Java Data

NARCIS (Netherlands)

de Mol, M.J.; Rensink, Arend; Hunt, James J.

This paper introduces an approach for adding graph transformation-based functionality to existing JAVA programs. The approach relies on a set of annotations to identify the intended graph structure, as well as on user methods to manipulate that structure, within the user’s own JAVA class

Der Weg zum Java-Profi Konzepte und Techniken für die professionelle Java-Entwicklung

CERN Document Server

Inden, Michael

2015-01-01

Sie haben bereits Einiges an Erfahrung mit Java und möchten Ihre Entwicklungstätigkeit nun professionalisieren? Oder sind Sie schon auf dem Weg zum Profi, benötigen aber ein Nachschlagewerk, das Ihnen die wichtigen Themen aus der Java-Welt kompakt und kompetent vermittelt? Dieses Buch bietet eine umfassende Einführung in die professionelle Entwicklung und vermittelt Ihnen das notwendige Wissen, um stabile und erweiterbare Softwaresysteme auf Java-SE-Basis zu bauen. Praxisnahe Beispiele helfen dabei, das Gelernte rasch umzusetzen. Neben der Praxis wird viel Wert auf das Verständnis zugrunde liegender Konzepte gelegt. Dabei kommen dem Autor Michael Inden seine umfangreichen Schulungs- und Entwicklererfahrungen zugute - und Ihnen als Leser damit ebenso. Diese Neuauflage wurde durchgehend überarbeitet, aktualisiert und erweitert. Natürlich darf das aktuelle Java 8 nicht fehlen. Verschiedene Kapitel sind Java 8 und seinen Neuerungen gewidmet. Dort wird ein fundierter Einstieg in die umfangreichen Erweit...

Java EE 7 the big picture

CERN Document Server

Coward, Danny

2015-01-01

Java EE 7: The Big Picture uniquely explores the entire Java EE 7 platform in an all-encompassing style while examining each tier of the platform in enough detail so that you can select the right technologies for specific project needs. In this authoritative guide, Java expert Danny Coward walks you through the code, applications, and frameworks that power the platform. Take full advantage of the robust capabilities of Java EE 7, increase your productivity, and meet enterprise demands with help from this Oracle Press resource.

Java EE 7 development with WildFly

CERN Document Server

Ćmil, Michał; Marchioni, Francesco

2014-01-01

If you are a Java developer who wants to learn about Java EE, this is the book for you. It's also ideal for developers who already have experience with the Java EE platform but would like to learn more about the new Java EE 7 features by analyzing fully functional sample applications using the new application server WildFly.

Opening Up Architectures of Software-Intensive Systems: A First Prototype Implementation

National Research Council Canada - National Science Library

Charland, Philippe; Dessureault, Dany; Ouellet, David; Lizotte, Michel

2007-01-01

.... One approach to deal with this problem is information hiding. This technical memorandum presents a prototype which implements this technique to reverse engineer dynamic models from Java software systems...

New Control Software of the 188cm Telescope of Okayama Astrophysical Observatory

Science.gov (United States)

Yoshida, Michitoshi; Shimizu, Yasuhiro; Watanabe, Etsuji; Yanagisawa, Kenshi; Uraguchi, Fumihiro

2002-12-01

We developed the telescope control software for the 188cm telescope of Okayama Astrophysical Observatory (OAO) based on Java technology. Basically, the software consists of two processes running on separate Java virtual machines; one of which is the "Command Dispatcher (CD)" and the other is the "User Interface (UI)". Among the two, CD is the main engine/server of the telescope control, whereas UI is just a client. The "standard" UI we provide is a graphical user interface written in Java/Swing. CD communicates with the local control units (LCUs) of the telescope through RS232C. CD is a Java multi-thread program, in which a number of threads run simultaneously. The threads running in CD are the follows: UNIX socket servers for external communications, socket opener for on-demand open/close of a socket port, socket client manager, auto-guider and dome watcher, internal command dispatcher, status manager, status collector, RS232C writer and reader, logger, and control units. The above "control units" are software models ("objects") of the telescope system. We introduced four control units- "Telescope", "Dome", "Weather-Monitor", and "Pointing"- for telescope control. The first three units are simple software models of the real-worlds devices. The last one, "Pointing", is a unit which abstracts pointing procedure of the telescope. CD and UI communicate with each other using UNIX socket. The command protocol of this communication is fairly simple, and observation instruments, auto guider, or additional UI for remote observation are also able to communicate with CD through socket using this protocol. CD opens and closes socket ports for communication on demand according to the request of client process (UI, instruments etc.), so that any clients can be connected to CD dynamically.

Object oriented JavaScript

CERN Document Server

Stefanov, Stoyan

2013-01-01

You will first be introduced to object-oriented programming, then to the basics of objects in JavaScript. This book takes a do-it-yourself approach when it comes to writing code, because the best way to really learn a programming language is by writing code. You are encouraged to type code into Firebug's console, see how it works and then tweak it and play around with it. There are practice questions at the end of each chapter to help you review what you have learned.For new to intermediate JavaScript developer who wants to prepare themselves for web development problems solved by smart JavaSc

JavaFX2 a Swing

OpenAIRE

Čapek, Ondřej

2011-01-01

The bachelor thesis deals mainly with the JavaFX2 library and its innovations. An aim is to acquaint readers with wider possibilities and help them with a transition from Swing to JavaFX2. In the thesis there are gone into benefits JavaFX2 which is accompanied by a source code examples for an illustration. A part of the thesis is also an application which shows differences between Swing and JavaFX2 both a graphical view as well as a viewing of the source code. Most of the information containe...

PDB Editor: a user-friendly Java-based Protein Data Bank file editor with a GUI.

Science.gov (United States)

Lee, Jonas; Kim, Sung Hou

2009-04-01

The Protein Data Bank file format is the format most widely used by protein crystallographers and biologists to disseminate and manipulate protein structures. Despite this, there are few user-friendly software packages available to efficiently edit and extract raw information from PDB files. This limitation often leads to many protein crystallographers wasting significant time manually editing PDB files. PDB Editor, written in Java Swing GUI, allows the user to selectively search, select, extract and edit information in parallel. Furthermore, the program is a stand-alone application written in Java which frees users from the hassles associated with platform/operating system-dependent installation and usage. PDB Editor can be downloaded from http://sourceforge.net/projects/pdbeditorjl/.

The definitive guide to Java Swing

CERN Document Server

Zukowski, John

2005-01-01

Updated for the 1.5 edition of the Java 2 Platform, this third edition is a one-stop resource for serious Java developers. It shows the parts of Java Swing API used to create graphical user interfaces (GUI); and Model-View-Controller architecture that lies behind all Swing components; and customizing components for specific environments.

Java simulations of embedded control systems.

Science.gov (United States)

Farias, Gonzalo; Cervin, Anton; Arzén, Karl-Erik; Dormido, Sebastián; Esquembre, Francisco

2010-01-01

This paper introduces a new Open Source Java library suited for the simulation of embedded control systems. The library is based on the ideas and architecture of TrueTime, a toolbox of Matlab devoted to this topic, and allows Java programmers to simulate the performance of control processes which run in a real time environment. Such simulations can improve considerably the learning and design of multitasking real-time systems. The choice of Java increases considerably the usability of our library, because many educators program already in this language. But also because the library can be easily used by Easy Java Simulations (EJS), a popular modeling and authoring tool that is increasingly used in the field of Control Education. EJS allows instructors, students, and researchers with less programming capabilities to create advanced interactive simulations in Java. The paper describes the ideas, implementation, and sample use of the new library both for pure Java programmers and for EJS users. The JTT library and some examples are online available on http://lab.dia.uned.es/jtt.

JAVA based LCD Reconstruction and Analysis Tools

International Nuclear Information System (INIS)

Bower, G.

2004-01-01

We summarize the current status and future developments of the North American Group's Java-based system for studying physics and detector design issues at a linear collider. The system is built around Java Analysis Studio (JAS) an experiment-independent Java-based utility for data analysis. Although the system is an integrated package running in JAS, many parts of it are also standalone Java utilities

Java based LCD reconstruction and analysis tools

International Nuclear Information System (INIS)

Bower, Gary; Cassell, Ron; Graf, Norman; Johnson, Tony; Ronan, Mike

2001-01-01

We summarize the current status and future developments of the North American Group's Java-based system for studying physics and detector design issues at a linear collider. The system is built around Java Analysis Studio (JAS) an experiment-independent Java-based utility for data analysis. Although the system is an integrated package running in JAS, many parts of it are also standalone Java utilities

Upper Secondary and Vocational Level Teachers at Social Software

Science.gov (United States)

Valtonen, Teemu; Kontkanen, Sini; Dillon, Patrick; Kukkonen, Jari; Väisänen, Pertti

2014-01-01

This study focuses on upper secondary and vocational level teachers as users of social software i.e. what software they use during their leisure and work and for what purposes they use software in teaching. The study is theorised within a technological pedagogical content knowledge framework, the emphasis is especially on technological knowledge…

Java to C: A Primer

DEFF Research Database (Denmark)

McDowell, Charlie; Villadsen, Jørgen

This book is designed to be used as a quick introduction to C for programmers already familiar with Java. It is not a replacement for a reference book on C but is instead a supplement. For the programmer already familiar with Java, the typical book on C requires the reader to wade through many...... details of already-familiar material. In this book, we quickly present the main concepts needed to begin writing serious programs in C, highlighting the differences between C and Java....

Study on Java Programming Education

OpenAIRE

太田, 信宏

2009-01-01

The purpose of this study is to consider the content and key points for inclusion in a Java programming course for beginners. The Java programming language has a variety of functions and has the largest application field of all such languages, containing many themes that are appropriate for any such programming course. The multifunctional and wide-ranging functions of Java, however, may actually act as a barrier to study for beginners. The core content of a programming class for beginners sho...

Reusable Client-Side JavaScript Modules for Immersive Web-Based Real-Time Collaborative Neuroimage Visualization.

Science.gov (United States)

Bernal-Rusiel, Jorge L; Rannou, Nicolas; Gollub, Randy L; Pieper, Steve; Murphy, Shawn; Robertson, Richard; Grant, Patricia E; Pienaar, Rudolph

2017-01-01

In this paper we present a web-based software solution to the problem of implementing real-time collaborative neuroimage visualization. In both clinical and research settings, simple and powerful access to imaging technologies across multiple devices is becoming increasingly useful. Prior technical solutions have used a server-side rendering and push-to-client model wherein only the server has the full image dataset. We propose a rich client solution in which each client has all the data and uses the Google Drive Realtime API for state synchronization. We have developed a small set of reusable client-side object-oriented JavaScript modules that make use of the XTK toolkit, a popular open-source JavaScript library also developed by our team, for the in-browser rendering and visualization of brain image volumes. Efficient realtime communication among the remote instances is achieved by using just a small JSON object, comprising a representation of the XTK image renderers' state, as the Google Drive Realtime collaborative data model. The developed open-source JavaScript modules have already been instantiated in a web-app called MedView , a distributed collaborative neuroimage visualization application that is delivered to the users over the web without requiring the installation of any extra software or browser plugin. This responsive application allows multiple physically distant physicians or researchers to cooperate in real time to reach a diagnosis or scientific conclusion. It also serves as a proof of concept for the capabilities of the presented technological solution.

A Profile for Safety Critical Java

DEFF Research Database (Denmark)

Schoeberl, Martin; Søndergaard, Hans; Thomsen, Bent

2007-01-01

We propose a new, minimal specification for real-time Java for safety critical applications. The intention is to provide a profile that supports programming of applications that can be validated against safety critical standards such as DO-178B [15]. The proposed profile is in line with the Java...... specification request JSR-302: Safety Critical Java Technology, which is still under discussion. In contrast to the current direction of the expert group for the JSR-302 we do not subset the rather complex Real-Time Specification for Java (RTSJ). Nevertheless, our profile can be implemented on top of an RTSJ...

HTML5 programming with JavaScript for dummies

CERN Document Server

Mueller, John Paul

2013-01-01

Web designers and programmers, add JavaScript to your HTML5 development toolkit without fear Modern websites are complex, and some of the most exciting features - things like geolocation, canvas, portability to mobile and more - require JavaScript to leverage what HTML5 can create. Don't know JavaScript? That's where HTML5 Programming with JavaScript For Dummies comes in. Rather than walking you through JavaScript as a programming language, it approaches JavaScript as a tool to help you enhance web pages. Helps web designers and programmers tap the full power of HT

a java-platform software for the evaluation of mass attenuation and ...

African Journals Online (AJOL)

USER

of software programs such as XCOM(Berger and. Hubbell,1987 ... programming language used in the design of the software are as ... interfaces (GUIs) and adding rich graphics functionality ... program at the first launching of the application. It.

Writing Kurdish Alphabetics in Java Programming Language

OpenAIRE

Rebwar Mala Nabi; Sardasht M-Raouf Mahmood; Mohammed Qadir Kheder; Shadman Mahmood

2016-01-01

Nowadays, Kurdish programmers usually suffer when they need to write Kurdish letter while they program in java. More to say, all the versions of Java Development Kits have not supported Kurdish letters. Therefore, the aim of this study is to develop Java Kurdish Language Package (JKLP) for solving writing Kurdish alphabetic in Java programming language. So that Kurdish programmer and/or students they can converts the English-alphabetic to Kurdish-alphabetic. Furthermore, adding Kurdish langua...

Achieving Better Buying Power through Acquisition of Open Architecture Software Systems. Volume 2 Understanding Open Architecture Software Systems: Licensing and Security Research and Recommendations

Science.gov (United States)

2016-01-06

KWD00], as are  CORBA, Microsoft’s .NET, and Enterprise  Java  Beans.    ● Configured system or sub­system​ – These are software systems built to conform to...background.  55 Some OSS is multiply­licensed, or distributed under two or more licenses. The  MySQL  database  software is distributed either under GPLv2 for...Automation    The license metamodel, calculation, and an assortment of license interpretations are implemented  in a  Java  package. The calculation

MARTA: a suite of Java-based tools for assigning taxonomic status to DNA sequences.

Science.gov (United States)

Horton, Matthew; Bodenhausen, Natacha; Bergelson, Joy

2010-02-15

We have created a suite of Java-based software to better provide taxonomic assignments to DNA sequences. We anticipate that the program will be useful for protistologists, virologists, mycologists and other microbial ecologists. The program relies on NCBI utilities including the BLAST software and Taxonomy database and is easily manipulated at the command-line to specify a BLAST candidate's query-coverage or percent identity requirements; other options include the ability to set minimal consensus requirements (%) for each of the eight major taxonomic ranks (Domain, Kingdom, Phylum, ...) and whether to consider lower scoring candidates when the top-hit lacks taxonomic classification.

Java-based remote viewing and processing of nuclear medicine images: toward "the imaging department without walls".

Science.gov (United States)

Slomka, P J; Elliott, E; Driedger, A A

2000-01-01

In nuclear medicine practice, images often need to be reviewed and reports prepared from locations outside the department, usually in the form of hard copy. Although hard-copy images are simple and portable, they do not offer electronic data search and image manipulation capabilities. On the other hand, picture archiving and communication systems or dedicated workstations cannot be easily deployed at numerous locations. To solve this problem, we propose a Java-based remote viewing station (JaRViS) for the reading and reporting of nuclear medicine images using Internet browser technology. JaRViS interfaces to the clinical patient database of a nuclear medicine workstation. All JaRViS software resides on a nuclear medicine department server. The contents of the clinical database can be searched by a browser interface after providing a password. Compressed images with the Java applet and color lookup tables are downloaded on the client side. This paradigm does not require nuclear medicine software to reside on remote computers, which simplifies support and deployment of such a system. To enable versatile reporting of the images, color tables and thresholds can be interactively manipulated and images can be displayed in a variety of layouts. Image filtering, frame grouping (adding frames), and movie display are available. Tomographic mode displays are supported, including gated SPECT. The time to display 14 lung perfusion images in 128 x 128 matrix together with the Java applet and color lookup tables over a V.90 modem is remote nuclear medicine viewing station using Java and an Internet or intranet browser. Images can be made easily and cost-effectively available to referring physicians and ambulatory clinics within and outside of the hospital, providing a convenient alternative to film media. We also find this system useful in home reporting of emergency procedures such as lung ventilation-perfusion scans or dynamic studies.

Using XML and Java for Astronomical Instrumentation Control

Science.gov (United States)

Ames, Troy; Koons, Lisa; Sall, Ken; Warsaw, Craig

2000-01-01

Traditionally, instrument command and control systems have been highly specialized, consisting mostly of custom code that is difficult to develop, maintain, and extend. Such solutions are initially very costly and are inflexible to subsequent engineering change requests, increasing software maintenance costs. Instrument description is too tightly coupled with details of implementation. NASA Goddard Space Flight Center is developing a general and highly extensible framework that applies to any kind of instrument that can be controlled by a computer. The software architecture combines the platform independent processing capabilities of Java with the power of the Extensible Markup Language (XML), a human readable and machine understandable way to describe structured data. A key aspect of the object-oriented architecture is software that is driven by an instrument description, written using the Instrument Markup Language (IML). ]ML is used to describe graphical user interfaces to control and monitor the instrument, command sets and command formats, data streams, and communication mechanisms. Although the current effort is targeted for the High-resolution Airborne Wideband Camera, a first-light instrument of the Stratospheric Observatory for Infrared Astronomy, the framework is designed to be generic and extensible so that it can be applied to any instrument.

Embedding Java Types in CPN Tools

DEFF Research Database (Denmark)

Lassen, Kristian Bisgaard; Westergaard, Michael

the modeller to call methods on Java ob jects. This paper is about how the stub code is generated, i.e., representing Java classes to Standard ML to be able to call Java code in the CPN models, and how the BRITNeY Suite framework handles the invocations of the stub code. The contribution of this paper is give......CPN Tools is a well known editor for Colored Petri nets (CPNs) that is capable of doing state space and performance analysis. The BRITNeY Suite has added yet another feature to CPN Tools for integrating CPN models with Java programs, by providing stubs accessible from the models, to allow...

Interrupt Handlers in Java

DEFF Research Database (Denmark)

Korsholm, Stephan; Schoeberl, Martin; Ravn, Anders Peter

2008-01-01

An important part of implementing device drivers is to control the interrupt facilities of the hardware platform and to program interrupt handlers. Current methods for handling interrupts in Java use a server thread waiting for the VM to signal an interrupt occurrence. It means that the interrupt...... is handled at a later time, which has some disadvantages. We present constructs that allow interrupts to be handled directly and not at a later point decided by a scheduler. A desirable feature of our approach is that we do not require a native middleware layer but can handle interrupts entirely with Java...... code. We have implemented our approach using an interpreter and a Java processor, and give an example demonstrating its use....

Java Foundation Classes in a Nutshell Desktop Quick Reference

CERN Document Server

Flanagan, David

1999-01-01

Java Foundation Classes in a Nutshell is an indispensable quick reference for Java programmers who are writing applications that use graphics or graphical user interfaces. The author of the bestsellingJava in a Nutshell has written fast-paced introductions to the Java APIs that comprise the Java Foundation Classes (JFC), such as the Swing GUI components and Java 2D, so that you can start using these exciting new technologies right away. This book also includes O'Reilly's classic-style, quick-reference material for all of the classes in the javax.swing and java.awt packages and their numerous

Modelling of cayenne production in Central Java using ARIMA-GARCH

Science.gov (United States)

Tarno; Sudarno; Ispriyanti, Dwi; Suparti

2018-05-01

Some regencies/cities in Central Java Province are known as producers of horticultural crops in Indonesia, for example, Brebes which is the largest area of shallot producer in Central Java, while the others, such as Cilacap and Wonosobo are the areas of cayenne commodities production. Currently, cayenne is a strategic commodity and it has broad impact to Indonesian economic development. Modelling the cayenne production is necessary to predict about the commodity to meet the need for society. The needs fulfillment of society will affect stability of the concerned commodity price. Based on the reality, the decreasing of cayenne production will cause the increasing of society’s basic needs price, and finally it will affect the inflation level at that area. This research focused on autoregressive integrated moving average (ARIMA) modelling by considering the effect of autoregressive conditional heteroscedasticity (ARCH) to study about cayenne production in Central Java. The result of empirical study of ARIMA-GARCH modelling for cayenne production in Central Java from January 2003 to November 2015 is ARIMA([1,3],0,0)-GARCH(1,0) as the best model.

Jess, the Java expert system shell

Energy Technology Data Exchange (ETDEWEB)

Friedman-Hill, E.J.

1997-11-01

This report describes Jess, a clone of the popular CLIPS expert system shell written entirely in Java. Jess supports the development of rule-based expert systems which can be tightly coupled to code written in the powerful, portable Java language. The syntax of the Jess language is discussed, and a comprehensive list of supported functions is presented. A guide to extending Jess by writing Java code is also included.

Bringing Interactivity to the Web: The JAVA Solution.

Science.gov (United States)

Knee, Richard H.; Cafolla, Ralph

Java is an object-oriented programming language of the Internet. It's popularity lies in its ability to create interactive Web sites across platforms. The most common Java programs are applications and applets, which adhere to a set of conventions that lets them run within a Java-compatible browser. Java is becoming an essential subject matter and…

Dose Rate of Environmental Gamma Radiation in Java Island

International Nuclear Information System (INIS)

Gatot Suhariyono; Buchori; Dadong Iskandar

2007-01-01

The dose rate Monitoring of environmental gamma radiation at some locations in Java Island in the year 2005 / 2006 has been carried out. The dose rate measurement of gamma radiation is carried out by using the peripheral of Portable Gamma of Ray Spectrometer with detector of NaI(Tl), Merck Exploranium, Model GR-130- MINISPEC, while to determine its geographic position is used by the GPS (Global Positioning System), made in German corporation of GPS III Plus type. The division of measurement region was conducted by dividing Java Island become 66 parts with same distance, except in Jepara area that will built PLTN (Nuclear Energy Power), distance between measurement points is more closed. The results of dose rate measurement are in 66 locations in Java Island the range of (19.24 ± 4.05) nSv/hour until (150.78 ± 12.26) nSv/hour with mean (51.93 ± 36.53) nSv/h. The lowest dose rate was in location of Garut, while highest dose rate was in Ujung Lemah Abang, Jepara location. The data can be used for base line data of dose rate of environmental gamma radiation in Indonesia, specially in Java Island. The mean level of gamma radiation in Java monitoring area (0.46 mSv / year) was still lower than worldwide average effective dose rate of terrestrial gamma rays 0.5 mSv / year (report of UNSCEAR, 2000). (author)

Tool-supported Refactoring for JavaScript

DEFF Research Database (Denmark)

Feldthaus, Asger; Millstein, Todd; Møller, Anders

2011-01-01

Script because of its dynamic nature. We propose a framework for specifying and implementing JavaScript refactorings based on pointer analysis. We describe novel refactorings motivated by best practice recommendations for JavaScript programming, and demonstrate how they can be described concisely in terms...... of queries provided by our framework. Experiments performed with a prototype implementation on a suite of existing applications show that our approach is well-suited for developing practical refactoring tools for JavaScript.......Refactoring is a popular technique for improving the structure of existing programs while maintaining their behavior. For statically typed programming languages such as Java, a wide variety of refactorings have been described, and tool support for performing refactorings and ensuring...

Java for dummies quick reference

CERN Document Server

Lowe, Doug

2012-01-01

A reference that answers your questions as you move through your coding The demand for Android programming and web apps continues to grow at an unprecedented pace and Java is the preferred language for both. Java For Dummies Quick Reference keeps you moving through your coding while you solve a problem, look up a command or syntax, or search for a programming tip. Whether you're a Java newbie or a seasoned user, this fast reference offers you quick access to solutions without requiring that you wade through pages of tutorial material. Leverages the true reference format that is organized with

Learn Java for Android Development

CERN Document Server

Friesen, J

2010-01-01

Android development is hot, and many programmers are interested in joining the fun. However, because this technology is based on Java, you should first obtain a solid grasp of the Java language and its foundational APIs to improve your chances of succeeding as an Android app developer. After all, you will be busy learning the architecture of an Android app, the various Android-specific APIs, and Android-specific tools. If you do not already know Java fundamentals, you will probably end up with a massive headache from also having to quickly cram those fundamentals into your knowledge base. Lear

Use of XML and Java for collaborative petroleum reservoir modeling on the Internet

Science.gov (United States)

Victorine, J.; Watney, W.L.; Bhattacharya, S.

2005-01-01

The GEMINI (Geo-Engineering Modeling through INternet Informatics) is a public-domain, web-based freeware that is made up of an integrated suite of 14 Java-based software tools to accomplish on-line, real-time geologic and engineering reservoir modeling. GEMINI facilitates distant collaborations for small company and academic clients, negotiating analyses of both single and multiple wells. The system operates on a single server and an enterprise database. External data sets must be uploaded into this database. Feedback from GEMINI users provided the impetus to develop Stand Alone Web Start Applications of GEMINI modules that reside in and operate from the user's PC. In this version, the GEMINI modules run as applets, which may reside in local user PCs, on the server, or Java Web Start. In this enhanced version, XML-based data handling procedures are used to access data from remote and local databases and save results for later access and analyses. The XML data handling process also integrates different stand-alone GEMINI modules enabling the user(s) to access multiple databases. It provides flexibility to the user to customize analytical approach, database location, and level of collaboration. An example integrated field-study using GEMINI modules and Stand Alone Web Start Applications is provided to demonstrate the versatile applicability of this freeware for cost-effective reservoir modeling. ?? 2005 Elsevier Ltd. All rights reserved.

A Type Graph Model for Java Programs

NARCIS (Netherlands)

Rensink, Arend; Zambon, Eduardo

2009-01-01

In this report we present a type graph that models all executable constructs of the Java programming language. Such a model is useful for any graph-based technique that relies on a representation of Java programs as graphs. The model can be regarded as a common representation to which all Java

Embedded Java security security for mobile devices

CERN Document Server

Debbabi, Mourad; Talhi, Chamseddine

2007-01-01

Java brings more functionality and versatility to the world of mobile devices, but it also introduces new security threats. This book contains a presentation of embedded Java security and presents the main components of embedded Java. It gives an idea of the platform architecture and is useful for researchers and practitioners.

Reusable Client-Side JavaScript Modules for Immersive Web-Based Real-Time Collaborative Neuroimage Visualization

Directory of Open Access Journals (Sweden)

Jorge L. Bernal-Rusiel

2017-05-01

Full Text Available In this paper we present a web-based software solution to the problem of implementing real-time collaborative neuroimage visualization. In both clinical and research settings, simple and powerful access to imaging technologies across multiple devices is becoming increasingly useful. Prior technical solutions have used a server-side rendering and push-to-client model wherein only the server has the full image dataset. We propose a rich client solution in which each client has all the data and uses the Google Drive Realtime API for state synchronization. We have developed a small set of reusable client-side object-oriented JavaScript modules that make use of the XTK toolkit, a popular open-source JavaScript library also developed by our team, for the in-browser rendering and visualization of brain image volumes. Efficient realtime communication among the remote instances is achieved by using just a small JSON object, comprising a representation of the XTK image renderers' state, as the Google Drive Realtime collaborative data model. The developed open-source JavaScript modules have already been instantiated in a web-app called MedView, a distributed collaborative neuroimage visualization application that is delivered to the users over the web without requiring the installation of any extra software or browser plugin. This responsive application allows multiple physically distant physicians or researchers to cooperate in real time to reach a diagnosis or scientific conclusion. It also serves as a proof of concept for the capabilities of the presented technological solution.

High-Level Synthesis: Productivity, Performance, and Software Constraints

Directory of Open Access Journals (Sweden)

Yun Liang

2012-01-01

Full Text Available FPGAs are an attractive platform for applications with high computation demand and low energy consumption requirements. However, design effort for FPGA implementations remains high—often an order of magnitude larger than design effort using high-level languages. Instead of this time-consuming process, high-level synthesis (HLS tools generate hardware implementations from algorithm descriptions in languages such as C/C++ and SystemC. Such tools reduce design effort: high-level descriptions are more compact and less error prone. HLS tools promise hardware development abstracted from software designer knowledge of the implementation platform. In this paper, we present an unbiased study of the performance, usability and productivity of HLS using AutoPilot (a state-of-the-art HLS tool. In particular, we first evaluate AutoPilot using the popular embedded benchmark kernels. Then, to evaluate the suitability of HLS on real-world applications, we perform a case study of stereo matching, an active area of computer vision research that uses techniques also common for image denoising, image retrieval, feature matching, and face recognition. Based on our study, we provide insights on current limitations of mapping general-purpose software to hardware using HLS and some future directions for HLS tool development. We also offer several guidelines for hardware-friendly software design. For popular embedded benchmark kernels, the designs produced by HLS achieve 4X to 126X speedup over the software version. The stereo matching algorithms achieve between 3.5X and 67.9X speedup over software (but still less than manual RTL design with a fivefold reduction in design effort versus manual RTL design.

Java Image I/O for VICAR, PDS, and ISIS

Science.gov (United States)

Deen, Robert G.; Levoe, Steven R.

2011-01-01

This library, written in Java, supports input and output of images and metadata (labels) in the VICAR, PDS image, and ISIS-2 and ISIS-3 file formats. Three levels of access exist. The first level comprises the low-level, direct access to the file. This allows an application to read and write specific image tiles, lines, or pixels and to manipulate the label data directly. This layer is analogous to the C-language "VICAR Run-Time Library" (RTL), which is the image I/O library for the (C/C++/Fortran) VICAR image processing system from JPL MIPL (Multimission Image Processing Lab). This low-level library can also be used to read and write labeled, uncompressed images stored in formats similar to VICAR, such as ISIS-2 and -3, and a subset of PDS (image format). The second level of access involves two codecs based on Java Advanced Imaging (JAI) to provide access to VICAR and PDS images in a file-format-independent manner. JAI is supplied by Sun Microsystems as an extension to desktop Java, and has a number of codecs for formats such as GIF, TIFF, JPEG, etc. Although Sun has deprecated the codec mechanism (replaced by IIO), it is still used in many places. The VICAR and PDS codecs allow any program written using the JAI codec spec to use VICAR or PDS images automatically, with no specific knowledge of the VICAR or PDS formats. Support for metadata (labels) is included, but is format-dependent. The PDS codec, when processing PDS images with an embedded VIAR label ("dual-labeled images," such as used for MER), presents the VICAR label in a new way that is compatible with the VICAR codec. The third level of access involves VICAR, PDS, and ISIS Image I/O plugins. The Java core includes an "Image I/O" (IIO) package that is similar in concept to the JAI codec, but is newer and more capable. Applications written to the IIO specification can use any image format for which a plug-in exists, with no specific knowledge of the format itself.

A Type Graph Model for Java Programs

NARCIS (Netherlands)

Rensink, Arend; Zambon, Eduardo; Lee, D.; Lopes, A.; Poetzsch-Heffter, A.

2009-01-01

In this work we present a type graph that models all executable constructs of the Java programming language. Such a model is useful for any graph-based technique that relies on a representation of Java programs as graphs. The model can be regarded as a common representation to which all Java syntax

Efficient Approximate JavaScript Call Graph Construction

NARCIS (Netherlands)

S. Benschop

2014-01-01

htmlabstractJavaScript has seen an increase in popularity in the last few years, both in the browser as well as on other platforms such as Node.js. However, the tools to help developers reason about JavaScript code remain fairly barebone in comparison with tooling for static languages such as Java.

Declarative Programming in Java

Directory of Open Access Journals (Sweden)

Razvan DINA

2014-03-01

Full Text Available Despite the code is rarely self-explanatory, the imperative programming languages are the most commonly used in our days by the programmers all over the world and Java is definitely the lead language in popularity. This paper tries to conclude if there are any chances to use the most popular programming language of the moment in a declarative manner, even if Java itself is an intrinsic imperative language.

Mastering JavaScript design patterns

CERN Document Server

Timms, Simon

2014-01-01

If you are a developer interested in creating easily maintainable applications that can grow and change with your needs, then this book is for you. Some experience with JavaScript (not necessarily with entire applications written in JavaScript) is required to follow the examples written in the book.

Application of Java technology in radiation image processing

International Nuclear Information System (INIS)

Cheng Weifeng; Li Zheng; Chen Zhiqiang; Zhang Li; Gao Wenhuan

2002-01-01

The acquisition and processing of radiation image plays an important role in modern application of civil nuclear technology. The author analyzes the rationale of Java image processing technology which includes Java AWT, Java 2D and JAI. In order to demonstrate applicability of Java technology in field of image processing, examples of application of JAI technology in processing of radiation images of large container have been given

Static Analysis of XML Transformations in Java

DEFF Research Database (Denmark)

Kirkegaard, Christian; Møller, Anders; Schwartzbach, Michael I.

2004-01-01

of XML documents to be defined, there are generally no automatic mechanisms for statically checking that a program transforms from one class to another as intended. We introduce Xact, a high-level approach for Java using XML templates as a first-class data type with operations for manipulating XML values...

The mzqLibrary--An open source Java library supporting the HUPO-PSI quantitative proteomics standard.

Science.gov (United States)

Qi, Da; Zhang, Huaizhong; Fan, Jun; Perkins, Simon; Pisconti, Addolorata; Simpson, Deborah M; Bessant, Conrad; Hubbard, Simon; Jones, Andrew R

2015-09-01

The mzQuantML standard has been developed by the Proteomics Standards Initiative for capturing, archiving and exchanging quantitative proteomic data, derived from mass spectrometry. It is a rich XML-based format, capable of representing data about two-dimensional features from LC-MS data, and peptides, proteins or groups of proteins that have been quantified from multiple samples. In this article we report the development of an open source Java-based library of routines for mzQuantML, called the mzqLibrary, and associated software for visualising data called the mzqViewer. The mzqLibrary contains routines for mapping (peptide) identifications on quantified features, inference of protein (group)-level quantification values from peptide-level values, normalisation and basic statistics for differential expression. These routines can be accessed via the command line, via a Java programming interface access or a basic graphical user interface. The mzqLibrary also contains several file format converters, including import converters (to mzQuantML) from OpenMS, Progenesis LC-MS and MaxQuant, and exporters (from mzQuantML) to other standards or useful formats (mzTab, HTML, csv). The mzqViewer contains in-built routines for viewing the tables of data (about features, peptides or proteins), and connects to the R statistical library for more advanced plotting options. The mzqLibrary and mzqViewer packages are available from https://code.google.com/p/mzq-lib/. © 2015 The Authors. PROTEOMICS Published by Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.

Java in a Nutshell a Desktop Quick Reference

CERN Document Server

Flanagan, David

2005-01-01

With more than 700,000 copies sold to date, Java ina Nutshellfrom O'Reilly is clearly the favorite resource amongst the legion ofdevelopers and programmers using Java technology. And now, with therelease of the 5.0 version of Java, O'Reilly has given the book thatdefined the "in a Nutshell" category another impressive tune-up. In this latest revision, readers will find Java in aNutshell,5th Edition, does more than just cover the extensive changes implicit in5.0, the newest version of Java. It's undergone a complete makeover--inscope, size, and type of coverage--in order to more closely meet

Java EE 7 recipes a problem-solution approach

CERN Document Server

Juneau, Josh

2013-01-01

Java EE 7 Recipes takes an example-based approach in showing how to program Enterprise Java applications in many different scenarios. Be it a small-business web application, or an enterprise database application, Java EE 7 Recipes provides effective and proven solutions to accomplish just about any task that you may encounter. You can feel confident using the reliable solutions that are demonstrated in this book in your personal or corporate environment. The solutions in Java EE 7 Recipes are built using the most current Java Enterprise specifications, including EJB 3.2, JSF 2.2, Expression La

Geothermal and volcanism in west Java

Science.gov (United States)

Setiawan, I.; Indarto, S.; Sudarsono; Fauzi I, A.; Yuliyanti, A.; Lintjewas, L.; Alkausar, A.; Jakah

2018-02-01

Indonesian active volcanoes extend from Sumatra, Jawa, Bali, Lombok, Flores, North Sulawesi, and Halmahera. The volcanic arc hosts 276 volcanoes with 29 GWe of geothermal resources. Considering a wide distribution of geothermal potency, geothermal research is very important to be carried out especially to tackle high energy demand in Indonesia as an alternative energy sources aside from fossil fuel. Geothermal potency associated with volcanoes-hosted in West Java can be found in the West Java segment of Sunda Arc that is parallel with the subduction. The subduction of Indo-Australian oceanic plate beneath the Eurasian continental plate results in various volcanic products in a wide range of geochemical and mineralogical characteristics. The geochemical and mineralogical characteristics of volcanic and magmatic rocks associated with geothermal systems are ill-defined. Comprehensive study of geochemical signatures, mineralogical properties, and isotopes analysis might lead to the understanding of how large geothermal fields are found in West Java compared to ones in Central and East Java. The result can also provoke some valuable impacts on Java tectonic evolution and can suggest the key information for geothermal exploration enhancement.

Building interactive virtual environments for simulated training in medicine using VRML and Java/JavaScript.

Science.gov (United States)

Korocsec, D; Holobar, A; Divjak, M; Zazula, D

2005-12-01

Medicine is a difficult thing to learn. Experimenting with real patients should not be the only option; simulation deserves a special attention here. Virtual Reality Modelling Language (VRML) as a tool for building virtual objects and scenes has a good record of educational applications in medicine, especially for static and animated visualisations of body parts and organs. However, to create computer simulations resembling situations in real environments the required level of interactivity and dynamics is difficult to achieve. In the present paper we describe some approaches and techniques which we used to push the limits of the current VRML technology further toward dynamic 3D representation of virtual environments (VEs). Our demonstration is based on the implementation of a virtual baby model, whose vital signs can be controlled from an external Java application. The main contributions of this work are: (a) outline and evaluation of the three-level VRML/Java implementation of the dynamic virtual environment, (b) proposal for a modified VRML Timesensor node, which greatly improves the overall control of system performance, and (c) architecture of the prototype distributed virtual environment for training in neonatal resuscitation comprising the interactive virtual newborn, active bedside monitor for vital signs and full 3D representation of the surgery room.

A Comparative Study on Java Technologies for Focus and Cursor Handling in Accessible Dynamic Interactions.

Science.gov (United States)

Jitngernmadan, Prajaks; Miesenberger, Klaus

2015-01-01

For an interactive application, supporting and guiding the user in fulfilling tasks is most important. The behavior of the application that will guide users through the procedures until they finish the task has to be designed intuitively and well guiding, especially if the users has only restricted or no access to the visual and spatial arrangement on the screen. Therefore, the focus/cursor management plays an important role for orientation and navigating through the interaction. In the frame of ongoing research on a software tool supporting blind people in more efficiently doing mathematical calculations, we researched how Java technologies support implementing an accessible Graphical User Interface (GUI) with an additional focus on usable accessibility in terms of guiding blind users through the process of solving mathematical calculations. We used Java Swing [1] and Eclipse SWT [2] APIs for creating a series of prototypes. We tested a) accessibility and usability of the prototypes for blind people when using screen reader software and refreshable Braille display and b) the implementation support to developers provided by both technologies. It turned out that Eclipse SWT API delivered best results under Windows operating system.

Java EE 7 development with NetBeans 8

CERN Document Server

Heffelfinger, David R

2015-01-01

The book is aimed at Java developers who wish to develop Java EE applications while taking advantage of NetBeans functionality to automate repetitive tasks. Familiarity with NetBeans or Java EE is not assumed.

A modification of Java virtual machine for counting bytecode commands

OpenAIRE

Nikolaj, Janko

2014-01-01

The objective of the thesis was to implement or modify an existing Java virtual machine (JVM) in a way that it will allow insight into statistics of the executed Java instructions of an executed user program. The functionality will allow analysis of the algorithms in Java environment. After studying the theory of Java and Java virtual machine, we decided to modify an existing Java virtual machine. We chose JamVM which is a lightweight, open-source Java virtual machine under GNU license. The i...

Java Power Tools

CERN Document Server

Smart, John

2008-01-01

All true craftsmen need the best tools to do their finest work, and programmers are no different. Java Power Tools delivers 30 open source tools designed to improve the development practices of Java developers in any size team or organization. Each chapter includes a series of short articles about one particular tool -- whether it's for build systems, version control, or other aspects of the development process -- giving you the equivalent of 30 short reference books in one package. No matter which development method your team chooses, whether it's Agile, RUP, XP, SCRUM, or one of many other

Java I/O

CERN Document Server

Harold, Elliotte Rusty

2006-01-01

All of Java's Input/Output (I/O) facilities are based on streams, which provide simple ways to read and write data of different types. Java provides many different kinds of streams, each with its own application. The universe of streams is divided into four largecategories: input streams and output streams, for reading and writing binary data; and readers and writers, for reading and writing textual (character) data. You're almost certainly familiar with the basic kinds of streams--but did you know that there's a CipherInputStream for reading encrypted data? And a ZipOutputStream for automati

Learn Objective-C for Java Developers

CERN Document Server

Bucanek, James

2009-01-01

Learn Objective-C for Java Developers will guide experienced Java developers into the world of Objective-C. It will show them how to take their existing language knowledge and design patterns and transfer that experience to Objective-C and the Cocoa runtime library. This is the express train to productivity for every Java developer who dreamt of developing for Mac OS X or iPhone, but felt that Objective-C was too intimidating. So hop on and enjoy the ride!

A safety-critical java technology compatibility kit

DEFF Research Database (Denmark)

Søndergaard, Hans; Korsholm, Stephan E.; Ravn, Anders Peter

2014-01-01

In order to claim conformance with a given Java Specification Request (JSR), a Java implementation has to pass all tests in an associated Technology Compatibility Kit (TCK). This paper presents development of test cases and tools for the draft Safety-Critical Java (SCJ) specification. In previous...... work we have shown how the Java Modeling Language (JML) is applied to specify conformance constraints for SCJ, and how JML-related tools may assist in generating and executing tests. Here we extend this work with a layout for concrete test cases including checking of results in a simplified version...

JavaScript & jQuery The Missing Manual

CERN Document Server

McFarland, David

2011-01-01

JavaScript lets you supercharge your HTML with animation, interactivity, and visual effects-but many web designers find the language hard to learn. This jargon-free guide covers JavaScript basics and shows you how to save time and effort with the jQuery library of prewritten JavaScript code. You'll soon be building web pages that feel and act like desktop programs, without having to do much programming. The important stuff you need to know: Make your pages interactive. Create JavaScript events that react to visitor actions.Use animations and effects. Build drop-down navigation menus, pop-ups

A predictable Java profile - rationale and implementations

DEFF Research Database (Denmark)

Søndergaard, Hans; Bøgholm, Thomas; Hansen, Rene Rydhof

A Java profile suitable for development of high integrity embedded systems is presented. It is based on event handlers which are grouped in missions and equipped with respectively private handler memory and shared mission memory. This is a result of our previous work on developing a Java profile......, and is directly inspired by interactions with the Open Group on their on-going work on a safety critical Java profile (JSR-302). The main contribution is an arrangement of the class hierarchy such that the proposal is a generalization of Real-Time Specification for Java (RTSJ). A further contribution...

Designing Abstractions for JavaScript Program Analysis

DEFF Research Database (Denmark)

Andreasen, Esben Sparre

JavaScript is a widely used dynamic programming language. What started out as a client-side scripting language for browsers, is now used for large applications in many different settings. As for other dynamic languages, JavaScript makes it easy to write programs quickly without being constrained...... by the language, and programmers exploit that power to write highly dynamic programs. Automated tools for helping programmers and optimizing programs are used successfully for many programming languages. Unfortunately, the automated tools for JavaScript are not as good as for other programming languages....... The program analyses, that the automated tools are built upon, are poorly suited to deal with the highly dynamic nature of JavaScript programs. The lack of language restrictions on the programmer are detrimental to the quality of program analyses for JavaScript. The aim of this dissertation is to address...

Formalising Java safety -- An overview

NARCIS (Netherlands)

Hartel, Pieter H.; Domingo-Ferrer, J; Chan, D.; Watson, A.

We review the existing literature on Java safety, emphasizing formal approaches, and the impact of Java safety on small footprint devices such as smart cards. The conclusion is that while a lot of good work has been done, a more concerted effort is needed to build a coherent set of machine readable

Trichosanthes L. (Cucurbitaceae) in Java

NARCIS (Netherlands)

Wilde, de Rugayah; Wilde, de W.J.J.O.

1997-01-01

As compared with the treatment in the Flora of Java (Backer in Backer & Bakhuizen van den Brink, 1963) with 8 species, a recent review of the genus Trichosanthes in Java resulted in the acceptance of 10 species for this island. Important changes are: the name T. trifolia has to be replaced by a

Encapsulating Software Platform Logic by Aspect-Oriented Programming : A Case Study in Using Aspects for Language Portability

NARCIS (Netherlands)

Kats, L.C.; Visser, E.

2010-01-01

Software platforms such as the Java Virtual Machine or the CLR .NET virtual machine have their own ecosystem of a core programming language or instruction set, libraries, and developer community. Programming languages can target multiple software platforms to increase interoperability or to boost

Phynx: an open source software solution supporting data management and web-based patient-level data review for drug safety studies in the general practice research database and other health care databases.

Science.gov (United States)

Egbring, Marco; Kullak-Ublick, Gerd A; Russmann, Stefan

2010-01-01

To develop a software solution that supports management and clinical review of patient data from electronic medical records databases or claims databases for pharmacoepidemiological drug safety studies. We used open source software to build a data management system and an internet application with a Flex client on a Java application server with a MySQL database backend. The application is hosted on Amazon Elastic Compute Cloud. This solution named Phynx supports data management, Web-based display of electronic patient information, and interactive review of patient-level information in the individual clinical context. This system was applied to a dataset from the UK General Practice Research Database (GPRD). Our solution can be setup and customized with limited programming resources, and there is almost no extra cost for software. Access times are short, the displayed information is structured in chronological order and visually attractive, and selected information such as drug exposure can be blinded. External experts can review patient profiles and save evaluations and comments via a common Web browser. Phynx provides a flexible and economical solution for patient-level review of electronic medical information from databases considering the individual clinical context. It can therefore make an important contribution to an efficient validation of outcome assessment in drug safety database studies.

JPP: A Java Pre-Processor

OpenAIRE

Kiniry, Joseph R.; Cheong, Elaine

1998-01-01

The Java Pre-Processor, or JPP for short, is a parsing pre-processor for the Java programming language. Unlike its namesake (the C/C++ Pre-Processor, cpp), JPP provides functionality above and beyond simple textual substitution. JPP's capabilities include code beautification, code standard conformance checking, class and interface specification and testing, and documentation generation.

JavaScript domain-driven design

CERN Document Server

Fehre, Philipp

2015-01-01

If you are an experienced JavaScript developer who wants to improve the design of his or her applications, or find yourself in a situation to implement an application in an unfamiliar domain, this book is for you. Prior knowledge of JavaScript is required and prior experience with Node.js will also be helpful.

EOS MLS Level 2 Data Processing Software Version 3

Science.gov (United States)

Livesey, Nathaniel J.; VanSnyder, Livesey W.; Read, William G.; Schwartz, Michael J.; Lambert, Alyn; Santee, Michelle L.; Nguyen, Honghanh T.; Froidevaux, Lucien; wang, Shuhui; Manney, Gloria L.;

THE NATURE, THE BEAUTY AND THE DIFFICULTY IN JAVA PROGRAMMING

Directory of Open Access Journals (Sweden)

Dror BENAMI

2016-12-01

Full Text Available JAVA language in recent years is widely used for the reason that integrates multiple information technologies. JAVA benefits are not fully exploited. The article discusses some aspects of the design of Data Mining algorithms in Java.JAVA: NATURA, FRUMUSEŢEA ŞI DIFICULTĂTILE PROGRAMĂRIILimbajul JAVA în ultimii ani se utilizează pe scară largă dat fiind că integrează mai multe tehnologii informaţionale. Avantajele JAVA nu sunt pe deplin exploatate. În articol sunt discutate unele aspecte de proiectare a algoritmilor de Data Mining în limbajul JAVA.

COMPARISION OF JAVA RMI AND CORBA FROM DIFFERENT PERSPECTIVES

Directory of Open Access Journals (Sweden)

Mustafa TÜRKSEVER

2001-01-01

Full Text Available In this paper, two of the widely used distributed object system standards which are CORBA and Java RMI has been compared from different perspectives. These perspectives are performance, distributed programming and system level services.

The ENSDF Java Package

International Nuclear Information System (INIS)

Sonzogni, A.A.

2005-01-01

A package of computer codes has been developed to process and display nuclear structure and decay data stored in the ENSDF (Evaluated Nuclear Structure Data File) library. The codes were written in an object-oriented fashion using the java language. This allows for an easy implementation across multiple platforms as well as deployment on web pages. The structure of the different java classes that make up the package is discussed as well as several different implementations

Math Description Engine Software Development Kit

Science.gov (United States)

Shelton, Robert O.; Smith, Stephanie L.; Dexter, Dan E.; Hodgson, Terry R.

2010-01-01

The Math Description Engine Software Development Kit (MDE SDK) can be used by software developers to make computer-rendered graphs more accessible to blind and visually-impaired users. The MDE SDK generates alternative graph descriptions in two forms: textual descriptions and non-verbal sound renderings, or sonification. It also enables display of an animated trace of a graph sonification on a visual graph component, with color and line-thickness options for users having low vision or color-related impairments. A set of accessible graphical user interface widgets is provided for operation by end users and for control of accessible graph displays. Version 1.0 of the MDE SDK generates text descriptions for 2D graphs commonly seen in math and science curriculum (and practice). The mathematically rich text descriptions can also serve as a virtual math and science assistant for blind and sighted users, making graphs more accessible for everyone. The MDE SDK has a simple application programming interface (API) that makes it easy for programmers and Web-site developers to make graphs accessible with just a few lines of code. The source code is written in Java for cross-platform compatibility and to take advantage of Java s built-in support for building accessible software application interfaces. Compiled-library and NASA Open Source versions are available with API documentation and Programmer s Guide at http:/ / prim e.jsc.n asa. gov.

JLAPACK – Compiling LAPACK FORTRAN to Java

Directory of Open Access Journals (Sweden)

David M. Doolin

1999-01-01

Full Text Available The JLAPACK project provides the LAPACK numerical subroutines translated from their subset Fortran 77 source into class files, executable by the Java Virtual Machine (JVM and suitable for use by Java programmers. This makes it possible for Java applications or applets, distributed on the World Wide Web (WWW to use established legacy numerical code that was originally written in Fortran. The translation is accomplished using a special purpose Fortran‐to‐Java (source‐to‐source compiler. The LAPACK API will be considerably simplified to take advantage of Java’s object‐oriented design. This report describes the research issues involved in the JLAPACK project, and its current implementation and status.

Sedimentary deposits study of the 2006 Java tsunami, in Pangandaran, West Java (preliminary result)

Energy Technology Data Exchange (ETDEWEB)

Maemunah, Imun, E-mail: imun-m2001@yahoo.com [Geological Agency, Ministry of Energy and Mineral Resources (Indonesia); Institute Technology of Bandung (Indonesia); Suparka, Emmy, E-mail: emmy@gc.itb.ac.id; Puspito, Nanang T, E-mail: nanang@staff.itb.ac.id [Institute Technology of Bandung (Indonesia); Hidayati, Sri, E-mail: shidayati@gmail.com [Geological Agency, Ministry of Energy and Mineral Resources (Indonesia)

2015-04-24

The 2006 Java Earthquake (Mw 7.2) has generated a tsunami that reached Pangandaran coastal plain with 9.7 m above sea level height of wave. In 2014 we examined the tsunami deposit exposed in shallow trenches along a∼300 m at 5 transect from shoreline to inland on Karapyak and Madasari, Pangandaran. We documented stratigraphically and sedimentologically, the characteristics of Java Tsunami deposit on Karapyak and Madasari and compared both sediments. In local farmland a moderately-sorted, brown soil is buried by a poorly-sorted, grey, medium-grained sand-sheet. The tsunami deposit was distinguished from the underlying soil by a pronounced increase in grain size that becomes finner upwards and landwards. Decreasing concentration of coarse size particles with distance toward inland are in agreement with grain size analysis. The thickest tsunami deposit is about 25 cm found at 84 m from shoreline in Madasari and about 15 cm found at 80 m from shoreline in Karapyak. The thickness of tsunami deposits in some transect become thinner landward but in some other transect lack a consistent suggested strongly affected by local topography. Tsunami deposits at Karapyak and Madasari show many similarities. Both deposits consist of coarse sand that sharply overlies a finer sandy soil. The presence mud drapes and other sedimentary structure like graded bedding, massive beds, mud clasts in many locations shows a dynamics process of tsunami waves. The imbrication coarse and shell fragments of the 2006 Java, tsunami deposits also provide information about the curent direction, allowing us to distinguish run up deposits from backwash deposits.

Sedimentary deposits study of the 2006 Java tsunami, in Pangandaran, West Java (preliminary result)

International Nuclear Information System (INIS)

Maemunah, Imun; Suparka, Emmy; Puspito, Nanang T; Hidayati, Sri

2015-01-01

The 2006 Java Earthquake (Mw 7.2) has generated a tsunami that reached Pangandaran coastal plain with 9.7 m above sea level height of wave. In 2014 we examined the tsunami deposit exposed in shallow trenches along a∼300 m at 5 transect from shoreline to inland on Karapyak and Madasari, Pangandaran. We documented stratigraphically and sedimentologically, the characteristics of Java Tsunami deposit on Karapyak and Madasari and compared both sediments. In local farmland a moderately-sorted, brown soil is buried by a poorly-sorted, grey, medium-grained sand-sheet. The tsunami deposit was distinguished from the underlying soil by a pronounced increase in grain size that becomes finner upwards and landwards. Decreasing concentration of coarse size particles with distance toward inland are in agreement with grain size analysis. The thickest tsunami deposit is about 25 cm found at 84 m from shoreline in Madasari and about 15 cm found at 80 m from shoreline in Karapyak. The thickness of tsunami deposits in some transect become thinner landward but in some other transect lack a consistent suggested strongly affected by local topography. Tsunami deposits at Karapyak and Madasari show many similarities. Both deposits consist of coarse sand that sharply overlies a finer sandy soil. The presence mud drapes and other sedimentary structure like graded bedding, massive beds, mud clasts in many locations shows a dynamics process of tsunami waves. The imbrication coarse and shell fragments of the 2006 Java, tsunami deposits also provide information about the curent direction, allowing us to distinguish run up deposits from backwash deposits

A Hardware Abstraction Layer in Java

DEFF Research Database (Denmark)

Schoeberl, Martin; Korsholm, Stephan; Kalibera, Tomas

2011-01-01

Embedded systems use specialized hardware devices to interact with their environment, and since they have to be dependable, it is attractive to use a modern, type-safe programming language like Java to develop programs for them. Standard Java, as a platform-independent language, delegates access...... to devices, direct memory access, and interrupt handling to some underlying operating system or kernel, but in the embedded systems domain resources are scarce and a Java Virtual Machine (JVM) without an underlying middleware is an attractive architecture. The contribution of this article is a proposal...... for Java packages with hardware objects and interrupt handlers that interface to such a JVM. We provide implementations of the proposal directly in hardware, as extensions of standard interpreters, and finally with an operating system middleware. The latter solution is mainly seen as a migration path...

The Java Management Extensions (JMX) Is Your Cluster Ready for Evolution?

CERN Document Server

Jaén-Martínez, J

2000-01-01

The arrival of commodity hardware configurations with performance rivaling that offered by RISC workstations is resulting in important advances in the state of the art of building and running very large scalable clusters at "mass market" pricing levels. However, cluster middleware layers are still considered as static infrastructures which are not ready for evolution. In this paper, we claim that middleware layers based on both agent and Java technologies offer new opportunities to support clusters where services can be dynamically added, removed and reconfigured. To support this claim, we present the Java Management Extensions (JMX), a new Java agent based technology, and its application to implement two disjoint cluster management middleware services (a remote reboot service and a distributed infrastructure for collecting Log events) which share a unique agent-based infrastructure.

Java Card for PayTv Application

OpenAIRE

Dutta, Pallab

2013-01-01

Smart cards are widely used along with PayTV receivers to store secret user keys and to perform security functions to prevent any unauthorized viewing of PayTV channels. Java Card technology enables programs written in the Java programming language to run on smart cards. Smart cards represent one of the smallest computing platforms in use today. The memory configuration of a smart card are of the order of 4K of RAM, 72K of EEPROM, and 24K of ROM. Using Java card provides advantages to the ind...

Java EE 7 with GlassFish 4 Application Server

CERN Document Server

Heffelfinger, David R

2014-01-01

This book is a practical guide and follows a very user-friendly approach. The book aims to get the reader up to speed in Java EE 7 development. All major Java EE 7 APIs and the details of the GlassFish 4 server are covered followed by examples of their use.If you are a Java developers who wants to become proficient with Java EE 7 this book is ideal for you. Readers are expected to have some experience with Java and to have developed and deployed applications in the past, but don't need any previous knowledge of Java EE or J2EE. It teaches the reader how to use GlassFish 4 to develop and deploy

Towards High Performance Processing In Modern Java Based Control Systems

CERN Document Server

Misiowiec, M; Buttner, M

2011-01-01

CERN controls software is often developed on Java foundation. Some systems carry out a combination of data, network and processor intensive tasks within strict time limits. Hence, there is a demand for high performing, quasi real time solutions. Extensive prototyping of the new CERN monitoring and alarm software required us to address such expectations. The system must handle dozens of thousands of data samples every second, along its three tiers, applying complex computations throughout. To accomplish the goal, a deep understanding of multithreading, memory management and interprocess communication was required. There are unexpected traps hidden behind an excessive use of 64 bit memory or severe impact on the processing flow of modern garbage collectors. Tuning JVM configuration significantly affects the execution of the code. Even more important is the amount of threads and the data structures used between them. Accurately dividing work into independent tasks might boost system performance. Thorough profili...

JavaScript Cookbook

CERN Document Server

Powers, Shelley

2010-01-01

Why reinvent the wheel every time you run into a problem with JavaScript? This cookbook is chock-full of code recipes that address common programming tasks, as well as techniques for building web apps that work in any browser. Just copy and paste the code samples into your project -- you'll get the job done faster and learn more about JavaScript in the process. You'll also learn how to take advantage of the latest features in ECMAScript 5 and HTML5, including the new cross-domain widget communication technique, HTML5's video and audio elements, and the drawing canvas. You'll find recipes for

OpenCV 3.0 computer vision with Java

CERN Document Server

Baggio, Daniel Lélis

2015-01-01

If you are a Java developer, student, researcher, or hobbyist wanting to create computer vision applications in Java then this book is for you. If you are an experienced C/C++ developer who is used to working with OpenCV, you will also find this book very useful for migrating your applications to Java. All you need is basic knowledge of Java, with no prior understanding of computer vision required, as this book will give you clear explanations and examples of the basics.

Learning the iOS 4 SDK for JavaScript Programmers Create Native Apps with Objective-C and Xcode

CERN Document Server

Goodman, Danny

2010-01-01

Is it possible for JavaScript programmers to learn Apple's iOS 4 SDK and live to tell the tale? Technology guru Danny Goodman did, and with this book he leaves a well-marked trail for you to follow. An authority on JavaScript since its inception, Goodman understands the challenges you might face in creating native iOS apps with this SDK, and introduces Xcode, Objective-C, and Cocoa Touch in a context you'll readily understand. Why bother with the SDK when you can simply build web apps for Apple's iOS devices? Web apps can't access an iPhone's music library, camera, or iOS system software for

U-Net/SLE: A Java-Based User-Customizable Virtual Network Interface

Directory of Open Access Journals (Sweden)

Matt Welsh

1999-01-01

Full Text Available We describe U‐Net/SLE (Safe Language Extensions, a user‐level network interface architecture which enables per‐application customization of communication semantics through downloading of user extension applets, implemented as Java classfiles, to the network interface. This architecture permits applications to safely specify code to be executed within the NI on message transmission and reception. By leveraging the existing U‐Net model, applications may implement protocol code at the user level, within the NI, or using some combination of the two. Our current implementation, using the Myricom Myrinet interface and a small Java Virtual Machine subset, allows host communication overhead to be reduced and improves the overlap of communication and computation during protocol processing.

Development of Remote Inspection Systems with the Java Applet

International Nuclear Information System (INIS)

Choi, Yoo Rark; Lee, Jae Cheol; Kim, Jae Hee

2005-01-01

The world wide web and java are powerful networking technologies on the internet. An applet is a program written in the java programming language that can be included in an HTML page, much in the same way as an image is included. When we use a Java technology-enabled browser to view a page that contains an applet, the applet code is transferred to a client's system and executed by the browser's Java Virtual Machine (JVM). We have developed two remote inspection systems for a reactor wall inspection and guide tube spilt pin inspection based on the java and traditional programming language. The java is used on a GUI(graphic user interface) and the traditional visual C++ programming language is used to control the inspection equipments

Towards an Existential Types Model for Java with Wildcards

DEFF Research Database (Denmark)

Cameron, Nicholas; Drossopoulou, Sophia; Ernst, Erik

2007-01-01

Wildcards extend Java generics by softening the mismatch between subtype and parametric polymorphism. Although they are a key part of the Java 5.0 programming language, a type system including wildcards has never been proven type sound. Wildcards have previously been formalised as existential types....... In this paper we extend FGJ, a featherweight formalisation of Java with generics, with existential types. We prove that this calculus, ExistsJ, is type sound, and illustrate how it models wildcards in the Java Programming Language. ExistsJ is not a full model for Java wildcards, because it does not support...... lower bounds for wildcards. We discuss why ExistsJ can not be easily extended with lower bounds, and how full Java wildcards could be modelled in a type sound way....

Dynamic Software Updating with Gosh! Current Status and the Road Ahead

DEFF Research Database (Denmark)

Gregersen, Allan Raundahl; Rasmussen, Michael; Jørgensen, Bo Nørregaard

2013-01-01

Any non-trivial software system has to be upgraded regularly to incorporate bug fixes and security patches or simply to keep up with the inevitable evolution in end-user requirements. Software upgrading is challenging, especially when it comes to online upgrading of running systems. In this paper......, we present the current status of Gosh!, a dynamic-software-updating system for Java, which provides comprehensive support for changing class definitions of live objects, including adding, removing and moving fields, methods, classes and interfaces anywhere in the inheritance hierarchy. Prior...

BioJava-ModFinder: identification of protein modifications in 3D structures from the Protein Data Bank.

Science.gov (United States)

Gao, Jianjiong; Prlic, Andreas; Bi, Chunxiao; Bluhm, Wolfgang F; Dimitropoulos, Dimitris; Xu, Dong; Bourne, Philip E; Rose, Peter W

2017-07-01

We developed a new software tool, BioJava-ModFinder, for identifying protein modifications observed in 3D structures archived in the Protein Data Bank (PDB). Information on more than 400 types of protein modifications were collected and curated from annotations in PDB, RESID, and PSI-MOD. We divided these modifications into three categories: modified residues, attachment modifications, and cross-links. We have developed a systematic method to identify these modifications in 3D protein structures. We have integrated this package with the RCSB PDB web application and added protein modification annotations to the sequence diagram and structure display. By scanning all 3D structures in the PDB using BioJava-ModFinder, we identified more than 30 000 structures with protein modifications, which can be searched, browsed, and visualized on the RCSB PDB website. BioJava-ModFinder is available as open source (LGPL license) at ( https://github.com/biojava/biojava/tree/master/biojava-modfinder ). The RCSB PDB can be accessed at http://www.rcsb.org . pwrose@ucsd.edu. © The Author 2017. Published by Oxford University Press.

An Integrated Platform for Dynamic Software Updating and its Application in Self-* systems

DEFF Research Database (Denmark)

Gregersen, Allan Raundahl; Jørgensen, Bo Nørregaard; Hadaytullah

2012-01-01

Practical dynamic updating of modern Java applications requires tool support to become an integral part of the software development and maintenance lifecycle. In this paper we present Javeleon, an easy-to-use tool for dynamic updates of Java applications. To support integration with specific...... frameworks, component systems and application servers, Javeleon currently provides tight integration with the NetBeans Platform, facilitating dynamic updating for applications built on top of the NetBeans Platform in an unconstrained manner. Javeleon supports state-preserving unanticipated runtime evolution...

Sistem Pencatatan Kehadiran Berbasis Java Card

Directory of Open Access Journals (Sweden)

Lidya Octarina

2010-12-01

Full Text Available The purposes of this research are to prevent jockey in exams, reduce the occurrence of error in attendance record at practicum or exams, and reduce error in filling students' attendance status to the attendance system. Three main parts of software development method are used; analysis, design, and literature method. Current system survey, analysis of the survey findings, identify the information, and identifying system requirements are implemented in analysis method. The design method that is used in this research is Unified Modeling Language (UML. The using of attendance recording system that uses Java Card-based application makes students identity card has a new function as the tool to make attendance. Conclusion of the research has shown that it can prevent identity fraud, minimize the time wasted in attendance system, reduce the printing paper, and reduce tagging errors eligibility status exam of students. 

Conformance test development with the Java modeling language

DEFF Research Database (Denmark)

Søndergaard, Hans; Korsholm, Stephan E.; Ravn, Anders P.

2017-01-01

In order to claim conformance with a Java Specification Request, a Java implementation has to pass all tests in an associated Technology Compatibility Kit (TCK). This paper presents a model-based development of a TCK test suite and a test execution tool for the draft Safety-Critical Java (SCJ......) profile specification. The Java Modeling Language (JML) is used to model conformance constraints for the profile. JML annotations define contracts for classes and interfaces. The annotations are translated by a tool into runtime assertion checks.Hereby the design and elaboration of the concrete test cases...

Interactive Web Services with Java

DEFF Research Database (Denmark)

Møller, Anders; Schwartzbach, Michael Ignatieff

This slide collection about Java Web service programming, JSP, Servlets and JWIG is created by: Anders Møller and Michael I. Schwartzbach at the BRICS research center at University of Aarhus, Denmark.......This slide collection about Java Web service programming, JSP, Servlets and JWIG is created by: Anders Møller and Michael I. Schwartzbach at the BRICS research center at University of Aarhus, Denmark....

Functional programming in JavaScript

CERN Document Server

Mantyla, Dan

2015-01-01

If you are a JavaScript developer interested in learning functional programming, looking for the quantum leap towards mastering the JavaScript language, or just want to become a better programmer in general, then this book is ideal for you. It is aimed at programmers involved in developing reactive frontend apps, server-side apps that wrangle with reliability and concurrency, and everything in between.

Development of Remote Inspection Systems with the Java Applet

Energy Technology Data Exchange (ETDEWEB)

Choi, Yoo Rark; Lee, Jae Cheol; Kim, Jae Hee [Korea Atomic Energy Research Institute, Daejeon (Korea, Republic of)

2005-07-01

The world wide web and java are powerful networking technologies on the internet. An applet is a program written in the java programming language that can be included in an HTML page, much in the same way as an image is included. When we use a Java technology-enabled browser to view a page that contains an applet, the applet code is transferred to a client's system and executed by the browser's Java Virtual Machine (JVM). We have developed two remote inspection systems for a reactor wall inspection and guide tube spilt pin inspection based on the java and traditional programming language. The java is used on a GUI(graphic user interface) and the traditional visual C++ programming language is used to control the inspection equipments.

Using Java to visualize and manipulate large arrays of neutron scattering data

International Nuclear Information System (INIS)

Mikkelson, D.; Worlton, T.; Chatterjee, A.; Hammonds, J.; Chen, D.

2000-01-01

The Intense Pulsed Neutron Source at Argonne National Laboratory is a world class pulsed neutron source with thirteen instruments designed to characterize materials using time-of-flight neutron scattering techniques. For each instrument, a collimated pulse of neutrons is directed to a material sample. The neutrons are scattered by the sample and detected by arrays of detectors. The type, number and arrangement of detectors vary widely from instrument to instrument, depending on which properties of materials are being studied. In all cases, the faster, higher energy neutrons reach the detectors sooner than the lower energy neutrons. This produces a time-of-flight spectrum at each detector element. The time-of-flight spectrum produced by each detector element records the scattering intensity at hundreds to thousands of discrete time intervals. Since there are typically between two hundred and ten thousand distinct detector elements, a single set of raw data can include millions of points. Often many such datasets are collected for a single sample to determine the effect of different conditions on the microscopic structure and dynamics of the sample. In this project, Java was used to construct a portable highly interactive system for viewing and operating on large collections of time-of-flight spectra. Java performed surprisingly well in handling large amounts of data quickly was fast enough even with standard PC hardware. Although Java may not be the choice at this time for applications where computational efficiency is the primary refinement, any disadvantages in this case were outweighed by the advantages of a clean object oriented language with a portable set of GUI components. The authors anticipate that Java will prove useful for scientific computing and data visualization in situations where portability, case of use and effective use of software development manpower are critical

JBoss Weld CDI for Java platform

CERN Document Server

Finnegan, Ken

2013-01-01

This book is a mini tutorial with plenty of code examples and strategies to give you numerous options when building your own applications.""JBoss Weld CDI for Java Platform"" is written for developers who are new to dependency injection. A rudimentary knowledge of Java is required.

Unibert - PC software for radiometric level gauging - the LB440 measuring system

International Nuclear Information System (INIS)

Mann, H.; Bickert, M.

2001-01-01

In almost all industrial branches radiometric measuring systems are being used today for a lot of different tasks. The most common field of this application are level gauging measurements by use of gamma radiation, i.e. for level detection as well as for level gauging over ranges of up to several meters. For our level gauge measuring system LB440 we developed a clearly arranged PC software, which allows starting, measuring and service of the level gauge. Over the RS232-interface the industrial computer can be connected with a Laptop or PC. The software is a supplemental or even a substitute for the operation over the frontpanel. The measuring system can be completely controlled by the Unibert PC-Software, realised by LabVIEW 5.1.1, which offers an interactive graphical user interface. The same functionality as in the ''embedded - software'' is available, completed with some additional functions. (orig.) [de

jFuzz: A Concolic Whitebox Fuzzer for Java

Science.gov (United States)

Jayaraman, Karthick; Harvison, David; Ganesh, Vijay; Kiezun, Adam

2009-01-01

We present jFuzz, a automatic testing tool for Java programs. jFuzz is a concolic whitebox fuzzer, built on the NASA Java PathFinder, an explicit-state Java model checker, and a framework for developing reliability and analysis tools for Java. Starting from a seed input, jFuzz automatically and systematically generates inputs that exercise new program paths. jFuzz uses a combination of concrete and symbolic execution, and constraint solving. Time spent on solving constraints can be significant. We implemented several well-known optimizations and name-independent caching, which aggressively normalizes the constraints to reduce the number of calls to the constraint solver. We present preliminary results due to the optimizations, and demonstrate the effectiveness of jFuzz in creating good test inputs. The source code of jFuzz is available as part of the NASA Java PathFinder. jFuzz is intended to be a research testbed for investigating new testing and analysis techniques based on concrete and symbolic execution. The source code of jFuzz is available as part of the NASA Java PathFinder.

Extensible numerical library in JAVA

International Nuclear Information System (INIS)

Aso, T.; Okazawa, H.; Takashimizu, N.

2001-01-01

The authors present the current status of the project for developing the numerical library in JAVA. The authors have presented how object-oriented techniques improve usage and also development of numerical libraries compared with the conventional way at previous conference. The authors need many functions for data analysis which is not provided within JAVA language, for example, good random number generators, special functions and so on. Authors' development strategy is focused on easiness of implementation and adding new features by users themselves not only by developers. In HPC field, there are other focus efforts to develop numerical libraries in JAVA. However, their focus is on the performance of execution, not easiness of extension. Following the strategy, the authors have designed and implemented more classes for random number generators and so on

Explicit Precedence Constraints in Safety-Critical Java

DEFF Research Database (Denmark)

Puffitsch, Wolfgang; Noulard, Eric; Pagetti, Claire

2013-01-01

Safety-critical Java (SCJ) aims at making the amenities of Java available for the development of safety-critical applications. The multi-rate synchronous language Prelude facilitates the specification of the communication and timing requirements of complex real-time systems. This paper combines...... to provide explicit support for precedence constraints. We present the considerations behind the design of this extension and discuss our experiences with a first prototype implementation based on the SCJ implementation of the Java Optimized Processor....

Learning Java by building Android games

CERN Document Server

Horton, John

2015-01-01

If you are completely new to either Java, Android, or game programming and are aiming to publish Android games, then this book is for you. This book also acts as a refresher for those who already have experience in Java on another platforms or other object-oriented languages.

The Java EE architect's handbook how to be a successful application architect for Java EE applications

CERN Document Server

Ashmore, Derek C.

2014-01-01

This handbook is a concise guide to assuming the role of application architect for Java EE applications. This handbook will guide the application architect through the entire Java EE project including identifying business requirements, performing use-case analysis, object and data modeling, and guiding a development team during construction. This handbook will provide tips and techniques for communicating with project managers and management. This handbook will provide strategies for making your application easier and less costly to support. Whether you are about to architect your first Java EE application or are looking for ways to keep your projects on-time and on-budget, you will refer to this handbook again and again.

Computer software to assess weld thickness loss in offshore pipelines: PEDS

Energy Technology Data Exchange (ETDEWEB)

Germano, Andre Luiz Silva; Correa, Samanda Cristine Arruda [Centro Universitario Estadual da Zona Oeste (CCMAT/UEZO), Rio de Janeiro, RJ (Brazil)], e-mail: scorrea@nuclear.ufrj.br; Souza, Edmilson Monteiro de; Silva, Ademir Xavier da; Lopes, Ricardo Tadeu [Programa de Engenharia Nuclear, COPPE, Universidade Federal do Rio de Janeiro (UFRJ), Rio de Janeiro, RJ (Brazil)], e-mails: emonteiro@nuclear.ufrj.br, ademir@nuclear.ufrj.br, ricardo@lin.ufrj.br

2010-07-01

The purpose of this work is to present an initial vision about a computer software named PEDS to assess weld thickness loss in offshore pipelines through digital radiography. This software calculates the thickness loss through a data bank obtained using computational modeling based on Monte Carlo MCNPX code. In order to give users more flexibility, the computer software was written in Java, which allows it to run on Linux, Mac OSX and Windows. Furthermore, tools are provided to image display, select and analyze specific areas of the image (measure average, area of selection) and generate profile plots. Applications of this software in the offshore area are presented. (author)

Glotaran: A Java-Based Graphical User Interface for the R Package TIMP

Directory of Open Access Journals (Sweden)

Katharine M. Mullen

2012-06-01

Full Text Available In this work the software application called Glotaran is introduced as a Java-based graphical user interface to the R package TIMP, a problem solving environment for fitting superposition models to multi-dimensional data. TIMP uses a command-line user interface for the interaction with data, the specification of models and viewing of analysis results. Instead, Glotaran provides a graphical user interface which features interactive and dynamic data inspection, easier -- assisted by the user interface -- model specification and interactive viewing of results. The interactivity component is especially helpful when working with large, multi-dimensional datasets as often result from time-resolved spectroscopy measurements, allowing the user to easily pre-select and manipulate data before analysis and to quickly zoom in to regions of interest in the analysis results. Glotaran has been developed on top of the NetBeans rich client platform and communicates with R through the Java-to-R interface Rserve. The background and the functionality of the application are described here. In addition, the design, development and implementation process of Glotaran is documented in a generic way.

InDEx: Open Source iOS and Android Software for Self-Reporting and Monitoring of Alcohol Consumption.

Science.gov (United States)

Leightley, Daniel; Puddephatt, Jo-Anne; Goodwin, Laura; Rona, Roberto; Fear, Nicola T

2018-03-23

InDEx is a software package for reporting and monitoring alcohol consumption via a smartphone application. Consumption of alcohol is self-reported by the user, and the app provides a visual representation of drinking behaviour and offers feedback on consumption levels compared to the general population. InDEx is intended as an exemplar app, operating as a standalone smartphone application and is highly customisable for a variety of research domains. InDEx is written in JavaScript, using IONIC framework which is cross-platform and is available under the liberal GNU General Public License (v3). The software is available from GitHub (https://github.com/DrDanL/index-app-public).

Java Performance Mysteries

Directory of Open Access Journals (Sweden)

Maldikar Pranita

2016-01-01

The contributions of this paper are (1 Observing Java performance mysteries in the cloud, (2 Identifying the sources of performance mysteries, and (3 Obtaining optimal and reproducible performance data.

Introduction to Graphics Programming in Java

DEFF Research Database (Denmark)

Rosendahl, Mads

Writing graphics applications in Java using Swing can be quite a daunting experience which requires understanding of some large libraries, and fairly advanced aspects of Java. In these notes we will show that by using a small subset of the Swing package we can write a write range of graphics...

Land subsidence threats and its management in the North Coast of Java

Science.gov (United States)

Sarah, D.; Soebowo, E.

2018-02-01

Cities on the north coast of Java such as Jakarta, Semarang, Pekalongan, and Surabaya are vulnerable to environmental pressures such as sea level change and land subsidence. Land subsidence can be caused by natural and anthropogenic processes. Geologically, the north coastal plain of Java consists of unconsolidated Holocene alluvial deposit. The recent alluvial deposit is prone to compaction, and further aggravated by anthropogenic forces such as groundwater extraction and land development. Understanding the complex interaction of natural and manmade factors is essential to establish mitigation strategy. Although the impacts of land subsidence are widely felt, many do not realize that land subsidence is taking place. This paper presents a brief review of the land subsidence threats in the North coast of Java and proposes a recommendation for suitable management response.

Performance comparison between Java and JNI for optimal implementation of computational micro-kernels

OpenAIRE

Halli , Nassim; Charles , Henri-Pierre; Méhaut , Jean-François

2015-01-01

International audience; General purpose CPUs used in high performance computing (HPC) support a vector instruction set and an out-of-order engine dedicated to increase the instruction level parallelism. Hence, related optimizations are currently critical to improve the performance of applications requiring numerical computation. Moreover, the use of a Java run-time environment such as the HotSpot Java Virtual Machine (JVM) in high performance computing is a promising alternative. It benefits ...

Genotype and Phenotype Characterization of Indonesian Phytophthora infestans Isolates Collected From Java and Outside Java Island

Directory of Open Access Journals (Sweden)

Dwinita Wikan Utami

2017-10-01

Full Text Available Phytophthora infestans, the cause of late blight disease, is a worldwide problem in potato and tomato production. To understand the biology and ecology of P. infestans and the mechanism of spatial and temporal factors for the variation in P. infestans, the population diversity is required to be fully characterized. The objective of this research is to characterize the diversity of P. infestans. Surveys and collection of P. infestans isolates were performed on many locations of potato's production center in Indonesia, as in Java (West Java, Central Java, and East Java and outside of Java islands (Medan, Jambi, and Makassar. The collected isolates were then analyzed for their virulence diversity via plant disease bioassays on differential varieties and genotype diversity based on fragment analysis genotypes profile using the multiplexing 20 simple sequence repeat markers. The virulence characterization showed that the isolates group from Makassar, South Sulawesi, have the broad spectrum virulence pathotype to R1, R2, R3, R4, and R5 differential plants. Simple sequence repeat genotype characterization showed that in general, the population structure of P. infestans grouping is accordance to the origin of the sampling locations. The diversity between populations is lower than diversity between isolates in one location population groups. The characters of P. infestans population showed that the population diversity of P. infestans more occurs on individual isolates in one location compared with the diversity between the population location sampling.

Integrated software system for low level waste management

International Nuclear Information System (INIS)

Worku, G.

1995-01-01

In the continually changing and uncertain world of low level waste management, many generators in the US are faced with the prospect of having to store their waste on site for the indefinite future. This consequently increases the set of tasks performed by the generators in the areas of packaging, characterizing, classifying, screening (if a set of acceptance criteria applies), and managing the inventory for the duration of onsite storage. When disposal sites become available, it is expected that the work will require re-evaluating the waste packages, including possible re-processing, re-packaging, or re-classifying in preparation for shipment for disposal under the regulatory requirements of the time. In this day and age, when there is wide use of computers and computer literacy is at high levels, an important waste management tool would be an integrated software system that aids waste management personnel in conducting these tasks quickly and accurately. It has become evident that such an integrated radwaste management software system offers great benefits to radwaste generators both in the US and other countries. This paper discusses one such approach to integrated radwaste management utilizing some globally accepted radiological assessment software applications

Overview of Java application configuration frameworks

OpenAIRE

Denisov, Victor

2013-01-01

This paper reviews three major application configuration frameworks for Java-based applications: java.util.Properties, Apache Commons Configuration and Preferences API. Basic functionality of each framework is illustrated with code examples. Pros and cons of each framework are described in moderate detail. Suggestions are made about typical use cases for each framework.

RxJava essentials

CERN Document Server

Morgillo, Ivan

2015-01-01

If you are an experienced Java developer, reactive programming will give you a new way to approach scalability and concurrency in your backend systems, without forcing you to switch programming languages.

Managing Scientific Software Complexity with Bocca and CCA

Directory of Open Access Journals (Sweden)

Benjamin A. Allan

2008-01-01

Full Text Available In high-performance scientific software development, the emphasis is often on short time to first solution. Even when the development of new components mostly reuses existing components or libraries and only small amounts of new code must be created, dealing with the component glue code and software build processes to obtain complete applications is still tedious and error-prone. Component-based software meant to reduce complexity at the application level increases complexity to the extent that the user must learn and remember the interfaces and conventions of the component model itself. To address these needs, we introduce Bocca, the first tool to enable application developers to perform rapid component prototyping while maintaining robust software-engineering practices suitable to HPC environments. Bocca provides project management and a comprehensive build environment for creating and managing applications composed of Common Component Architecture components. Of critical importance for high-performance computing (HPC applications, Bocca is designed to operate in a language-agnostic way, simultaneously handling components written in any of the languages commonly used in scientific applications: C, C++, Fortran, Python and Java. Bocca automates the tasks related to the component glue code, freeing the user to focus on the scientific aspects of the application. Bocca embraces the philosophy pioneered by Ruby on Rails for web applications: start with something that works, and evolve it to the user's purpose.

Petroleum system of Northwest Java basin based on gravity data analysis

Science.gov (United States)

Widianto, E.

2018-01-01

Energy management in the upstream oil and gas sector becomes very important for the country’s energy security. The renewal of energy resources and reserves becomes necessary and is a must. In the oil and gas industry, gravity data is usually used only for regional surveys, but with the development of instrumentation technology and gravity software development, this method can be used for assessing oil and gas survey stages from exploration to production. This study was conducted to evaluate aspects of petroleum system and exploration play concept in the part of Northwest Java Basin, covering source rock deposition regions (source kitchen area, migration direction), development of reservoirs, structural and stratigraphic trap, based on gravity data. This study uses data from Bouguer gravity anomaly map by filtering process to produce a residual map depicting sedimentation basin configuration. The mapping generated 20 sedimentary basins in Java Island with the total hydrocarbon resources of 113 BBOE (Billion Barrel of Oil Equivalent). The petroleum system analysis was conducted in the Northwest Basin section. The final map produced illustrates the condition of petroleum system and play concept that can be used as exploration direction, expectedly reducing the risk of drilling failure.

SCEC-VDO: A New 3-Dimensional Visualization and Movie Making Software for Earth Science Data

Science.gov (United States)

Milner, K. R.; Sanskriti, F.; Yu, J.; Callaghan, S.; Maechling, P. J.; Jordan, T. H.

2016-12-01

Researchers and undergraduate interns at the Southern California Earthquake Center (SCEC) have created a new 3-dimensional (3D) visualization software tool called SCEC Virtual Display of Objects (SCEC-VDO). SCEC-VDO is written in Java and uses the Visualization Toolkit (VTK) backend to render 3D content. SCEC-VDO offers advantages over existing 3D visualization software for viewing georeferenced data beneath the Earth's surface. Many popular visualization packages, such as Google Earth, restrict the user to views of the Earth from above, obstructing views of geological features such as faults and earthquake hypocenters at depth. SCEC-VDO allows the user to view data both above and below the Earth's surface at any angle. It includes tools for viewing global earthquakes from the U.S. Geological Survey, faults from the SCEC Community Fault Model, and results from the latest SCEC models of earthquake hazards in California including UCERF3 and RSQSim. Its object-oriented plugin architecture allows for the easy integration of new regional and global datasets, regardless of the science domain. SCEC-VDO also features rich animation capabilities, allowing users to build a timeline with keyframes of camera position and displayed data. The software is built with the concept of statefulness, allowing for reproducibility and collaboration using an xml file. A prior version of SCEC-VDO, which began development in 2005 under the SCEC Undergraduate Studies in Earthquake Information Technology internship, used the now unsupported Java3D library. Replacing Java3D with the widely supported and actively developed VTK libraries not only ensures that SCEC-VDO can continue to function for years to come, but allows for the export of 3D scenes to web viewers and popular software such as Paraview. SCEC-VDO runs on all recent 64-bit Windows, Mac OS X, and Linux systems with Java 8 or later. More information, including downloads, tutorials, and example movies created fully within SCEC-VDO is

Incorporating Level-2 PSA Feature of CONPAS into AIMS-PSA Software

International Nuclear Information System (INIS)

Han, Sang Hoon; Lim, Hogon; Ahn, Kwang Il

2014-01-01

CONPAS (CONtainment Performance Analysis System) utilizes a methodology to treat containment phenomena in detail like APET but in simple way. In mid 2000's, KAERI has developed very fast cut set generator FTREX and PC's OS (Operating system) has changed into Windows 95. Thus, KAERI has developed new Level-1 PSA software, called AIMS-PSA (Advanced Information Management System for PSA) to replace KIRAP. Recently, KAERI has been developing an integrated PSA platform, called OCEANS (On-line Consolidator and Evaluator of All mode risk for Nuclear System), for the risk assessment of all power modes and all hazards. CONPAS for Level-2 PSA was developed in 1990's using the Visual Basic 6.0 compiler which is not supported any more. It needs to be updated for the integrated PSA software framework. This paper describes a study to incorporate the features of CONPAS into AIMS-PSA. The basic idea is to follow the approach of CONPAS, but in the integrated way. Various approaches for Level-2 PSA have been used since WASH-1400. APET approach of NUREG-1150 study would be most comprehensive and complex methodology for containment event tree analysis. CONPAS is the Level-2 PSA software to utilize an approach to treat containment phenomena in detail like APET but in simple way. But, new Level-2 PSA software is required to develop more integrated PSA framework. A modified approach of CONPAS is developed and incorporated in AIMS-PSA software that can handle Level-1 and Level-2 PSA in the integrated way (from the viewpoint of event tree and fault tree). AIMS-PSA combines whole Level-2 PSA model to produce a One Top fault tree and to generate cut sets in the same way as Level-1 PSA. Quantification results of Level-2 PSA such as frequency for each STC can be calculated from the minimal cut sets

Pointer Analysis for JavaScript Programming Tools

DEFF Research Database (Denmark)

Feldthaus, Asger

Tools that can assist the programmer with tasks, such as, refactoring or code navigation, have proven popular for Java, C#, and other programming languages. JavaScript is a widely used programming language, and its users could likewise benefit from such tools, but the dynamic nature of the language...... is an obstacle for the development of these. Because of this, tools for JavaScript have long remained ineffective compared to those for many other programming languages. Static pointer analysis can provide a foundation for more powerful tools, although the design of this analysis is itself a complicated endeavor....... In this work, we explore techniques for performing pointer analysis of JavaScript programs, and we find novel applications of these techniques. In particular, we demonstrate how these can be used for code navigation, automatic refactoring, semi-automatic refactoring of incomplete programs, and checking of type...

Aplikasi Data Pelanggan Berbasis Java dan Mobile pada PT. PLN (Persero Area Semarang

Directory of Open Access Journals (Sweden)

Rizaldi Habibie

2016-01-01

Full Text Available In modern times, like today, the role of software or applications that run on top of the platform is very important. This is because almost all of the work done by the people, made by the software or application. Applications can be used to assist in the processing of data and upload the final report. Data recorded previously processed by the paper can be recorded and processed by the application so that more efficiently. PT. PLN (Persero Semarang District State electricity company has many customers in the city of Semarang. Customer data belonging to this company has not been processed in digital form. This causes the data of regular visits undertaken are not directly connected with customer data, owned so inefficient and requires a long process in the course of the report. Thus, it takes an application that can help in the treatment of customer data, data of visited consumer, and generate reports . Customer data Java-based and mobile applications for PLN (Persero Semarang District State intended for the treatment of customer data, data of visited connsumer and generate reports. The application consists of two application. The first applications developed using the programming language Java, which can run on the operating system Windows. The second application was designed and implemented using the framework ionic, which can run on the Android operating system. This application uses MySQL as a database management system, which is used for data storage media.

Patterns for Safety-Critical Java Memory Usage

DEFF Research Database (Denmark)

Rios Rivas, Juan Ricardo; Nilsen, Kelvin; Schoeberl, Martin

2012-01-01

Scoped memories are introduced in real-time Java profiles in order to make object allocation and deallocation time and space predictable. However, explicit scoping requires care from programmers when dealing with temporary objects, passing scope-allocated objects as arguments to methods, and retu......Scoped memories are introduced in real-time Java profiles in order to make object allocation and deallocation time and space predictable. However, explicit scoping requires care from programmers when dealing with temporary objects, passing scope-allocated objects as arguments to methods...... are illustrated by implementations in the safety-critical Java profile....

Java EE 7 performance tuning and optimization

CERN Document Server

Oransa, Osama

2014-01-01

The book adopts a step-by-step approach, starting from building the basics and adding to it gradually by using different tools and examples. The book sequence is easy to follow and all topics are fully illustrated showing you how to make good use of different performance diagnostic tools. If you are an experienced Java developer, architect, team leader, consultant, support engineer, or anyone else who needs performance tuning in your Java applications, and in particular, Java enterprise applications, this book is for you. No prior experience of performance tuning is required.

Frame of reference of software architecture for web applications and mobile

Directory of Open Access Journals (Sweden)

Carlos Alberto Maliza Martinez

2016-08-01

Full Text Available Given the need to have a guide for the implementation of informatics applications, and thus achieve automate tasks improving response times of users, designed the framework of reference the architecture software for web and mobile applications with technology free software and open source. The technology to be used is the Object Oriented Programming (OOP with JAVA programming language, a client / server architecture and style of multitier architecture, which will allow us to create scalable, robust and stable systems, together of Java Platform Enterprise Edition (JEE that helps us to implement business applications thanks to the JPA and EJB APIs. By the server for handling transactions, security, scalability and concurrency we have Wildfly application server. And on the client side, for creating graphical interfaces we use the ExtJS and Sencha Touch Framework, which are lightweight, high-performance libraries based on HTML5, JavaScript and CSS3. The report generator is JasperReports, because it has the ability to deliver rich content display and printer. The database engine is MySQL, because its connectivity, speed, and security make it a very appropriate server for access from the web. Finally, as editor of web and mobile applications, we have the integrated development environment Eclipse IDE platform of open source. In this paper we make a critical analysis of such applications and formulate the Framework of Software Architecture for the development and implementation of Web and Mobile Applications, which were implemented in the ECU911 Babahoyo and at the Instituto Tecnologico Superior Babahoyo, proving through its application their effectiveness and efficiency in the implementation of integrated systems

Fixing the Sorting Algorithm for Android, Java and Python

NARCIS (Netherlands)

C.P.T. de Gouw (Stijn); F.S. de Boer (Frank)

2015-01-01

htmlabstractTim Peters developed the Timsort hybrid sorting algorithm in 2002. TimSort was first developed for Python, a popular programming language, but later ported to Java (where it appears as java.util.Collections.sort and java.util.Arrays.sort). TimSort is today used as the default sorting

From Java to Ruby things every manager should know

CERN Document Server

Tate, Bruce

2006-01-01

As a development team, you want to be productive. You want to write flexible, maintainable web applications. You want to use Ruby and Rails. But can you justify the move away from established platforms such as J2EE? Bruce Tate's From Java to Ruby has the answers, and it expresses them in a language that'll help persuade managers and executives who've seen it all. See when and where the switch makes sense, and see how to make it. If you're trying to adopt Ruby in your organization and need some help, this is the book for you. Based on a decision tree (a concept familiar to managers and executives,) Java to Ruby stays above the low-level technical debate to examine the real benefits and risks to adoption. Java to Ruby is packed with interviews of Ruby customers and developers, so you can see what types of projects are likely to succeed, and which ones are likely to fail. Ruby and Rails may be the answer, but first you need to be sure you're asking the right question. By addressing risk and fitness of purpose, J...

Towards high performance processing in modern Java-based control systems

International Nuclear Information System (INIS)

Misiowiec, M.; Buczak, W.; Buttner, M.

2012-01-01

CERN controls software is often developed on Java foundation. Some systems carry out a combination of data, network and processor intensive tasks within strict time limits. Hence, there is a demand for high performing, quasi real time solutions. The system must handle dozens of thousands of data samples every second, along its three tiers, applying complex computations throughout. To accomplish the goal, a deep understanding of multi-threading, memory management and inter process communication was required. There are unexpected traps hidden behind an excessive use of 64 bit memory or severe impact on the processing flow of modern garbage collectors. Tuning JVM configuration significantly affects the execution of the code. Even more important is the amount of threads and the data structures used between them. Accurately dividing work into independent tasks might boost system performance. Thorough profiling with dedicated tools helped understand the bottlenecks and choose algorithmically optimal solutions. Different virtual machines were tested, in a variety of setups and garbage collection options. The overall work provided for discovering actual hard limits of the whole setup. We present this process of designing a challenging system in view of the characteristics and limitations of the contemporary Java run-time environment. (authors)

A new Java Thread model for concurrent programming of real-time systems

NARCIS (Netherlands)

Hilderink, G.H.; Broenink, Johannes F.; Bakkers, André

1998-01-01

The Java ™ Virtual Machine (JVM) provides a high degree of platform independence, but being an interpreter, Java has a poor system performance. New compiler techniques and Java processors will gradually improve the performance of Java, but despite these developments, Java is still far from

COMPARISON OF APP INVENTOR 2 AND JAVA IN CREATING PERSONAL APPLICATIONS FOR ANDROID ON EXAMPLE OF A NOTEPAD

Directory of Open Access Journals (Sweden)

Radosław Kowalczyk

2016-09-01

Full Text Available Nowadays, there is a common tendency to seek simpler and faster solutions that could be used in a process of software development. At the same time two other trends can be observed - rapid increase of mobile applications popularity and introducing IT concepts to non-IT specialists. This is why App Inventor 2 is one of the tools that software development community is interested in. The goal of this paper is to verify the possibility of using App Inventor as a tool for creating personal applications and compare it with possibilities given by Java, which is a native environment for Android platform. Comparison was based on application for managing personal text notes which was created in both solutions. The application had the same layout as well as analogical code, and it was the subject of performance tests followed by a survey. Performance test revealed that both implementations provided efficiency which is good enough for everyday use and small size personal applications. Survey participants preferred application built in Java due to its better responsiveness and visual appearance. Concluding, current shape of App Inventor, makes it useless for professionals, but useful for non-IT specialists for creating personal applications.

Performance Evaluation of Java Based Object Relational Mapping Tools

Directory of Open Access Journals (Sweden)

Shoaib Mahmood Bhatti

2013-04-01

Full Text Available Object persistency is the hot issue in the form of ORM (Object Relational Mapping tools in industry as developers use these tools during software development. This paper presents the performance evaluation of Java based ORM tools. For this purpose, Hibernate, Ebean and TopLinkhave been selected as the ORM tools which are popular and open source. Their performance has been measured from execution point of view. The results show that ORM tools are the good option for the developers considering the system throughput in shorter setbacks and they can be used efficiently and effectively for performing mapping of the objects into the relational dominated world of database, thus creating a hope for a better and well dominated future of this technology.

Composing simulations using persistent software components

Energy Technology Data Exchange (ETDEWEB)

Holland, J.V.; Michelsen, R.E.; Powell, D.R.; Upton, S.C.; Thompson, D.R.

1999-03-01

The traditional process for developing large-scale simulations is cumbersome, time consuming, costly, and in some cases, inadequate. The topics of software components and component-based software engineering are being explored by software professionals in academic and industrial settings. A component is a well-delineated, relatively independent, and replaceable part of a software system that performs a specific function. Many researchers have addressed the potential to derive a component-based approach to simulations in general, and a few have focused on military simulations in particular. In a component-based approach, functional or logical blocks of the simulation entities are represented as coherent collections of components satisfying explicitly defined interface requirements. A simulation is a top-level aggregate comprised of a collection of components that interact with each other in the context of a simulated environment. A component may represent a simulation artifact, an agent, or any entity that can generated events affecting itself, other simulated entities, or the state of the system. The component-based approach promotes code reuse, contributes to reducing time spent validating or verifying models, and promises to reduce the cost of development while still delivering tailored simulations specific to analysis questions. The Integrated Virtual Environment for Simulation (IVES) is a composition-centered framework to achieve this potential. IVES is a Java implementation of simulation composition concepts developed at Los Alamos National Laboratory for use in several application domains. In this paper, its use in the military domain is demonstrated via the simulation of dismounted infantry in an urban environment.

Practical database programming with Java

CERN Document Server

Bai, Ying

2011-01-01

"This important resource offers a detailed description about the practical considerations and applications in database programming using Java NetBeans 6.8 with authentic examples and detailed explanations. This book provides readers with a clear picture as to how to handle the database programming issues in the Java NetBeans environment. The book is ideal for classroom and professional training material. It includes a wealth of supplemental material that is available for download including Powerpoint slides, solution manuals, and sample databases"--

Design and Implementation of Web Based Supply Centers Material Request and Tracking (SMART) System Using With JAVA and JAVA Servlets

National Research Council Canada - National Science Library

Ciftci, Cemalettin

2001-01-01

.... The third tier maintains the database management systems. Java servlets and Java provide programmers platform and operating system independent, multi-threaded, object oriented, secure and mobile means to create dynamic content on the web...

Programación Java

OpenAIRE

Martínez de Morentin Iribarren, Xabier

2014-01-01

Este proyecto trata de informar y dar una base sobre Java, así como los programas a los cuales se les da uso, para facilitar la programación en el mundo laboral, ya sean programas de gestión de datos como Assembla y Tortoise o de desarrollo de aplicaciones, como Eclipse o NetBeans. Trata de llevar al ámbito más profesional, la realización de una aplicación Java. Para ello se respetarán los convenios a la hora de denominaciones de clases, así como los métodos, etc., y la realización d...

Learning PHP, MySQL, and JavaScript

CERN Document Server

Nixon, Robin

2009-01-01

If you know HTML, this guide will have you building interactive websites quickly. You'll learn how to create responsive, data-driven websites with PHP, MySQL, and JavaScript, regardless of whether you already know how to program. Discover how the powerful combination of PHP and MySQL provides an easy way to build modern websites complete with dynamic data and user interaction. You'll also learn how to add JavaScript to create rich Internet applications and websites. Learning PHP, MySQL, and JavaScript explains each technology separately, shows you how to combine them, and introduces valuable

Managing Risk Areas in Software Development Offshoring: A CMMI Level 5 Case

DEFF Research Database (Denmark)

Persson, John Stouby; Schlichter, Bjarne Rerup

2015-01-01

Software companies are increasingly offshoring development to countries with high expertise at lower cost. Offshoring involves particular risk areas that if ignored increase the likelihood of failure. However, the offshoring client’s maturity level may influence the management of these risk areas....... Against this backdrop, we present an interpretive case study of how managers perceive and mitigate the risk areas in software development offshoring with a mature CMMI level 5 (Capability Maturity Model, Integrated) software company as the client. We find that managers perceive and mitigate most...

Runtime Support for Type-Safe Dynamic Java Classes

National Research Council Canada - National Science Library

Malabarba, Scott; Pandey, Raju; Gragg, Jeff; Barr, Earl; Barnes, J. F

2000-01-01

.... In this paper we present an approach for supporting dynamic evolution of Java programs. In this approach, Java programs can evolve by changing their components, namely classes, during their execution...

Java Tool Framework for Automation of Hardware Commissioning and Maintenance Procedures

International Nuclear Information System (INIS)

Ho, J C; Fisher, J M; Gordon, J B; Lagin, L J; West, S L

2007-01-01

The National Ignition Facility (NIF) is a 192-beam laser system designed to study high energy density physics. Each beam line contains a variety of line replaceable units (LRUs) that contain optics, stepping motors, sensors and other devices to control and diagnose the laser. During commissioning and subsequent maintenance of the laser, LRUs undergo a qualification process using the Integrated Computer Control System (ICCS) to verify and calibrate the equipment. The commissioning processes are both repetitive and tedious when we use remote manual computer controls, making them ideal candidates for software automation. Maintenance and Commissioning Tool (MCT) software was developed to improve the efficiency of the qualification process. The tools are implemented in Java, leveraging ICCS services and CORBA to communicate with the control devices. The framework provides easy-to-use mechanisms for handling configuration data, task execution, task progress reporting, and generation of commissioning test reports. The tool framework design and application examples will be discussed

Instrument Control (iC) - An Open-Source Software to Automate Test Equipment.

Science.gov (United States)

Pernstich, K P

2012-01-01

It has become common practice to automate data acquisition from programmable instrumentation, and a range of different software solutions fulfill this task. Many routine measurements require sequential processing of certain tasks, for instance to adjust the temperature of a sample stage, take a measurement, and repeat that cycle for other temperatures. This paper introduces an open-source Java program that processes a series of text-based commands that define the measurement sequence. These commands are in an intuitive format which provides great flexibility and allows quick and easy adaptation to various measurement needs. For each of these commands, the iC-framework calls a corresponding Java method that addresses the specified instrument to perform the desired task. The functionality of iC can be extended with minimal programming effort in Java or Python, and new measurement equipment can be addressed by defining new commands in a text file without any programming.

Learning JavaScript data structures and algorithms

CERN Document Server

Groner, Loiane

2014-01-01

If you are a JavaScript developer or someone who has basic knowledge of JavaScript, and want to explore its optimum ability, this fast-paced book is definitely for you. Programming logic is the only thing you need to know to start having fun with algorithms.

Java parallel secure stream for grid computing

International Nuclear Information System (INIS)

Chen, J.; Akers, W.; Chen, Y.; Watson, W.

2001-01-01

The emergence of high speed wide area networks makes grid computing a reality. However grid applications that need reliable data transfer still have difficulties to achieve optimal TCP performance due to network tuning of TCP window size to improve the bandwidth and to reduce latency on a high speed wide area network. The authors present a pure Java package called JPARSS (Java Parallel Secure Stream) that divides data into partitions that are sent over several parallel Java streams simultaneously and allows Java or Web applications to achieve optimal TCP performance in a gird environment without the necessity of tuning the TCP window size. Several experimental results are provided to show that using parallel stream is more effective than tuning TCP window size. In addition X.509 certificate based single sign-on mechanism and SSL based connection establishment are integrated into this package. Finally a few applications using this package will be discussed

JEnsembl: a version-aware Java API to Ensembl data systems.

Science.gov (United States)

Paterson, Trevor; Law, Andy

2012-11-01

The Ensembl Project provides release-specific Perl APIs for efficient high-level programmatic access to data stored in various Ensembl database schema. Although Perl scripts are perfectly suited for processing large volumes of text-based data, Perl is not ideal for developing large-scale software applications nor embedding in graphical interfaces. The provision of a novel Java API would facilitate type-safe, modular, object-orientated development of new Bioinformatics tools with which to access, analyse and visualize Ensembl data. The JEnsembl API implementation provides basic data retrieval and manipulation functionality from the Core, Compara and Variation databases for all species in Ensembl and EnsemblGenomes and is a platform for the development of a richer API to Ensembl datasources. The JEnsembl architecture uses a text-based configuration module to provide evolving, versioned mappings from database schema to code objects. A single installation of the JEnsembl API can therefore simultaneously and transparently connect to current and previous database instances (such as those in the public archive) thus facilitating better analysis repeatability and allowing 'through time' comparative analyses to be performed. Project development, released code libraries, Maven repository and documentation are hosted at SourceForge (http://jensembl.sourceforge.net).

Java 7 New Features Cookbook

CERN Document Server

Reese, Richard M

2012-01-01

Each recipe comprises step-by-step instructions followed by an analysis of what was done in each task and other useful information. The book is designed so that you can read it chapter by chapter, or look at the list of recipes and refer to them in no particular order. Each example comes with its expected output to make your learning even easier. This book is designed to bring those who are familiar with Java up-to-speed on the new features found in Java 7.

Potential of Fishing Port Development in the East Java

Science.gov (United States)

Rosana, N.; Prasita, V. D.

2018-03-01

The development of fishing ports in East Java is one of efforts to increase the province revenue, develop the fishing industry and to improve the welfare of fishermen. Profile of capture fisheries in East Java should be provide information that can be developed based on priorities and types of resources. The purpose of this study was to determine several districts in East Java which is a priority for the development of fishing ports based on the potential that exists. The method used is descriptive and spatial analysis in order to obtain an overview of the districts in East Java that has the potential to be developed. Results of the study is the districts in East Java are priorities for the development of fishing ports based on aspects related to the fishery is Banyuwangi, Trenggalek and Jember.

OntoCAT--simple ontology search and integration in Java, R and REST/JavaScript.

Science.gov (United States)

Adamusiak, Tomasz; Burdett, Tony; Kurbatova, Natalja; Joeri van der Velde, K; Abeygunawardena, Niran; Antonakaki, Despoina; Kapushesky, Misha; Parkinson, Helen; Swertz, Morris A

2011-05-29

Ontologies have become an essential asset in the bioinformatics toolbox and a number of ontology access resources are now available, for example, the EBI Ontology Lookup Service (OLS) and the NCBO BioPortal. However, these resources differ substantially in mode, ease of access, and ontology content. This makes it relatively difficult to access each ontology source separately, map their contents to research data, and much of this effort is being replicated across different research groups. OntoCAT provides a seamless programming interface to query heterogeneous ontology resources including OLS and BioPortal, as well as user-specified local OWL and OBO files. Each resource is wrapped behind easy to learn Java, Bioconductor/R and REST web service commands enabling reuse and integration of ontology software efforts despite variation in technologies. It is also available as a stand-alone MOLGENIS database and a Google App Engine application. OntoCAT provides a robust, configurable solution for accessing ontology terms specified locally and from remote services, is available as a stand-alone tool and has been tested thoroughly in the ArrayExpress, MOLGENIS, EFO and Gen2Phen phenotype use cases. http://www.ontocat.org.

JavaScript and interactive web pages in radiology.

Science.gov (United States)

Gurney, J W

2001-10-01

Web publishing is becoming a more common method of disseminating information. JavaScript is an object-orientated language embedded into modern browsers and has a wide variety of uses. The use of JavaScript in radiology is illustrated by calculating the indices of sensitivity, specificity, and predictive values from a table of true positives, true negatives, false positives, and false negatives. In addition, a single line of JavaScript code can be used to annotate images, which has a wide variety of uses.

JaSTA-2: Second version of the Java Superposition T-matrix Application

Science.gov (United States)

Halder, Prithish; Das, Himadri Sekhar

2017-12-01

In this article, we announce the development of a new version of the Java Superposition T-matrix App (JaSTA-2), to study the light scattering properties of porous aggregate particles. It has been developed using Netbeans 7.1.2, which is a java integrated development environment (IDE). The JaSTA uses double precision superposition T-matrix codes for multi-sphere clusters in random orientation, developed by Mackowski and Mischenko (1996). The new version consists of two options as part of the input parameters: (i) single wavelength and (ii) multiple wavelengths. The first option (which retains the applicability of older version of JaSTA) calculates the light scattering properties of aggregates of spheres for a single wavelength at a given instant of time whereas the second option can execute the code for a multiple numbers of wavelengths in a single run. JaSTA-2 provides convenient and quicker data analysis which can be used in diverse fields like Planetary Science, Atmospheric Physics, Nanoscience, etc. This version of the software is developed for Linux platform only, and it can be operated over all the cores of a processor using the multi-threading option.

Protyping machine vision software on the World Wide Web

Science.gov (United States)

Karantalis, George; Batchelor, Bruce G.

1998-10-01

Interactive image processing is a proven technique for analyzing industrial vision applications and building prototype systems. Several of the previous implementations have used dedicated hardware to perform the image processing, with a top layer of software providing a convenient user interface. More recently, self-contained software packages have been devised and these run on a standard computer. The advent of the Java programming language has made it possible to write platform-independent software, operating over the Internet, or a company-wide Intranet. Thus, there arises the possibility of designing at least some shop-floor inspection/control systems, without the vision engineer ever entering the factories where they will be used. It successful, this project will have a major impact on the productivity of vision systems designers.

jqcML: an open-source java API for mass spectrometry quality control data in the qcML format.

Science.gov (United States)

Bittremieux, Wout; Kelchtermans, Pieter; Valkenborg, Dirk; Martens, Lennart; Laukens, Kris

2014-07-03

The awareness that systematic quality control is an essential factor to enable the growth of proteomics into a mature analytical discipline has increased over the past few years. To this aim, a controlled vocabulary and document structure have recently been proposed by Walzer et al. to store and disseminate quality-control metrics for mass-spectrometry-based proteomics experiments, called qcML. To facilitate the adoption of this standardized quality control routine, we introduce jqcML, a Java application programming interface (API) for the qcML data format. First, jqcML provides a complete object model to represent qcML data. Second, jqcML provides the ability to read, write, and work in a uniform manner with qcML data from different sources, including the XML-based qcML file format and the relational database qcDB. Interaction with the XML-based file format is obtained through the Java Architecture for XML Binding (JAXB), while generic database functionality is obtained by the Java Persistence API (JPA). jqcML is released as open-source software under the permissive Apache 2.0 license and can be downloaded from https://bitbucket.org/proteinspector/jqcml .

Enhancing User Customization through Novel Software Architecture for Utility Scale Solar Siting Software

Energy Technology Data Exchange (ETDEWEB)

Brant Peery; Sam Alessi; Randy Lee; Leng Vang; Scott Brown; David Solan; Dan Ames

2014-06-01

There is a need for a spatial decision support application that allows users to create customized metrics for comparing proposed locations of a new solar installation. This document discusses how PVMapper was designed to overcome the customization problem through the development of loosely coupled spatial and decision components in a JavaScript plugin architecture. This allows the user to easily add functionality and data to the system. The paper also explains how PVMapper provides the user with a dynamic and customizable decision tool that enables them to visually modify the formulas that are used in the decision algorithms that convert data to comparable metrics. The technologies that make up the presentation and calculation software stack are outlined. This document also explains the architecture that allows the tool to grow through custom plugins created by the software users. Some discussion is given on the difficulties encountered while designing the system.

The Strategy of KPID West Java in Socializing Media Literacy

Directory of Open Access Journals (Sweden)

Lucy Pujasari Supratman

2017-07-01

Full Text Available The socialization strategy of media literacy which has done by KPID West Java (Regional-Indonesia Broadcasting Commission aims to strengthen national integration, national identity, and educate the nation. This study focused on the strategies of KPID West Java as an independent institution of the state in disseminating a variety of media literacy programs that have been run by the West Java KPID period 2015-2018 to promote media literacy. The author used a descriptive case study method. In this study, a case to be analyzed is in how KPID West Java disseminated the media literacy. The essence of media literacy conducted by KPID West Java is to grow the wise society in gratification media and to encourage the broadcaster’s institution to produce quality broadcasting content. KPID West Java as a representative of the public continues to call for media literacy socialization which is harder to be censored if there is no public participation in reporting a content violation. This form of socialization by using new media approach encourage KPID West Java Period 2015-2018 to develop steps of innovative media literacy along with the technology development.

Development of a web application for water resources based on open source software

Science.gov (United States)

Delipetrev, Blagoj; Jonoski, Andreja; Solomatine, Dimitri P.

2014-01-01

This article presents research and development of a prototype web application for water resources using latest advancements in Information and Communication Technologies (ICT), open source software and web GIS. The web application has three web services for: (1) managing, presenting and storing of geospatial data, (2) support of water resources modeling and (3) water resources optimization. The web application is developed using several programming languages (PhP, Ajax, JavaScript, Java), libraries (OpenLayers, JQuery) and open source software components (GeoServer, PostgreSQL, PostGIS). The presented web application has several main advantages: it is available all the time, it is accessible from everywhere, it creates a real time multi-user collaboration platform, the programing languages code and components are interoperable and designed to work in a distributed computer environment, it is flexible for adding additional components and services and, it is scalable depending on the workload. The application was successfully tested on a case study with concurrent multi-users access.

JAVA CONCURENT PROGRAM FOR THE SMARANDACHE FUNCTION

OpenAIRE

Power, David; Tabirca, S.; Tabirca, T.

2004-01-01

The aim of this article is to propose a Java concurrent program for the Smarandache fimction based on an equation. Some results concerning the theoretical complexity of this program are proposed. Finally, the experimental results of the sequential and Java programs are given in order to demonstrate the efficiency of the conament implementation.

Formal specification with the Java modeling language

NARCIS (Netherlands)

Huisman, Marieke; Ahrendt, Wolfgang; Grahl, Daniel; Hentschel, Martin; Ahrendt, Wolfgang; Beckert, Bernhard; Bubel, Richard; Hähnle, Reiner; Schmitt, Peter H.; Ulbrich, Mattoas

2016-01-01

This text is a general, self contained, and tool independent introduction into the Java Modeling Language, JML. It appears in a book about the KeY approach and tool, because JML is the dominating starting point of KeY style Java verification. However, this chapter does not depend on KeY, nor any

Java application for the superposition T-matrix code to study the optical properties of cosmic dust aggregates

Science.gov (United States)

Halder, P.; Chakraborty, A.; Deb Roy, P.; Das, H. S.

2014-09-01

In this paper, we report the development of a java application for the Superposition T-matrix code, JaSTA (Java Superposition T-matrix App), to study the light scattering properties of aggregate structures. It has been developed using Netbeans 7.1.2, which is a java integrated development environment (IDE). The JaSTA uses double precession superposition codes for multi-sphere clusters in random orientation developed by Mackowski and Mischenko (1996). It consists of a graphical user interface (GUI) in the front hand and a database of related data in the back hand. Both the interactive GUI and database package directly enable a user to model by self-monitoring respective input parameters (namely, wavelength, complex refractive indices, grain size, etc.) to study the related optical properties of cosmic dust (namely, extinction, polarization, etc.) instantly, i.e., with zero computational time. This increases the efficiency of the user. The database of JaSTA is now created for a few sets of input parameters with a plan to create a large database in future. This application also has an option where users can compile and run the scattering code directly for aggregates in GUI environment. The JaSTA aims to provide convenient and quicker data analysis of the optical properties which can be used in different fields like planetary science, atmospheric science, nano science, etc. The current version of this software is developed for the Linux and Windows platform to study the light scattering properties of small aggregates which will be extended for larger aggregates using parallel codes in future. Catalogue identifier: AETB_v1_0 Program summary URL:http://cpc.cs.qub.ac.uk/summaries/AETB_v1_0.html Program obtainable from: CPC Program Library, Queen's University, Belfast, N. Ireland Licensing provisions: Standard CPC licence, http://cpc.cs.qub.ac.uk/licence/licence.html No. of lines in distributed program, including test data, etc.: 571570 No. of bytes in distributed program

A Simple Application Program Interface for Saving Java Program Data on a Wiki

OpenAIRE

Yamanoue, Takashi; Oda, Kentaro; Shimozono, Koichi

2012-01-01

A simple application program interface (API) for Java programs running on a wiki is implemented experimentally. A Java program with the API can be running on a wiki, and the Java program can save its data on the wiki. The Java program consists of PukiWiki, which is a popular wiki in Japan, and a plug-in, which starts up Java programs and classes of Java. A Java applet with default access privilege cannot save its data at a local host. We have constructed an API of applets for easy and unified...

Synchronization resources in heterogeneous environments: Time-sharing, real-time and Java

International Nuclear Information System (INIS)

Pereira, A.; Vega, J.; Pacios, L.; Sanchez, E.; Portas, A.

2006-01-01

The asynchronous event distribution system (AEDS) was built to provide synchronization resources within the TJ-II local area network. It is a software system developed to add 'soft synchronization' capabilities to the TJ-II data acquisition, control and analysis environments. 'Soft synchronization' signifies that AEDS is not a real-time system. In fact, AEDS is based on TCP/IP over ETHERNET networks. However, its response time is adequate for practical purposes when synchronization requirements can support some delay between event dispatch and message reception. Event broadcasters (or synchronization servers in AEDS terminology) are Windows computers. Destination computers (or synchronization clients) were also Windows machines in the first version of AEDS. However, this fact imposed a very important limitation on synchronization capabilities. To overcome this situation, synchronization clients for different environments have been added to AEDS: for time-sharing operating systems (Unix and Linux), real-time operating systems (OS-9 and VxWorks) and Java applications. These environments have different synchronization primitives, requiring different approaches to provide the required uniform functionality. This has been achieved with POSIX thread library synchronization primitives (mutex and condition variables) on Unix/Linux systems, IPC mechanisms for concurrent processes on OS-9 and VxWorks real-time operating systems, and 'synchronized-wait/notify' primitives on Java virtual machines

Java interface for asserting interactive telerobotic control

Science.gov (United States)

DePasquale, Peter; Lewis, John; Stein, Matthew R.

1997-12-01

Many current web-based telerobotic interfaces use HyperText Markup Language (HTML) forms to assert user control on a robot. While acceptable for some tasks, a Java interface can provide better client-server interaction. The Puma Paint project is a joint effort between the Department of Computing Sciences at Villanova University and the Department of Mechanical and Materials Engineering at Wilkes University. THe project utilizes a Java applet to control a Unimation Puma 1760 robot during the task of painting on a canvas. The interface allows the user to control the paint strokes as well as the pressure of a brush on the canvas and how deep the brush is dipped into a paint jar. To provide immediate feedback, a virtual canvas models the effects of the controls as the artist paints. Live color video feedback is provided, allowing the user to view the actual results of the robot's motions. Unlike the step-at-a-time model of many web forms, the application permits the user to assert interactive control. The greater the complexity of the interaction between the robot and its environment, the greater the need for high quality information presentation to the user. The use of Java allows the sophistication of the user interface to be raised to the level required for satisfactory control. This paper describes the Puma Paint project, including the interface and communications model. It also examines the challenges of using the Internet as the medium of communications and the challenges of encoding free ranging motions for transmission from the client to the robot.

SimulRad: a Java interface for a Monte-Carlo simulation code to visualize in 3D the early stages of water radiolysis

International Nuclear Information System (INIS)

Plante, Ianik L.; Filali-Mouhim, Abdelali; Jay-Gerin, Jean-Paul

2005-01-01

Using a Fortran step-by-step Monte-Carlo simulation code of liquid water radiolysis and the Java programming language, we have developed a Java interface software, called SimulRad. This interface enables a user, in a three-dimensional environment, to either visualize the spatial distribution of all reactive species present in the track of an ionizing particle at a chosen simulation time, or present an animation of the chemical development of the particle track over a chosen time interval (between ∼10 -12 and 10 -6 s). It also allows one to select a particular radiation-induced cluster of species to view, in fine detail, the chemical reactions that occur between these species

Geology Structure Identification Using Pre-Stack Depth Migration (PSDM Method of Tomography Result in North West Java Basin

Directory of Open Access Journals (Sweden)

Sudra Irawan

2017-06-01

Full Text Available North West Java Basin is a tertiary sedimentary basin which is located in the right of the western part of the Java island. North West Java Basin is geodynamic where currently located at the rear position of the path of the volcanic arc of Java that is the result of the India-Australia plate subduction to the south towards the Eurasian plate (Explanation of Sunda in the north. Geology structure observation is difficult to be conducted at Quaternary volcanicfield due to the classical problem at tropical region. In the study interpretation of fault structures can be done on a cross-section of Pre-Stack Depth Migration (PSDM used prayer namely Hardware Key Device, ie Central Processing Unit: RedHat Enterprise Linux AS 5.0, prayer Monitor 24-inch pieces, Server: SGI altix 450/SuSe Linux Enterprise Server 9.0, 32 GB, 32 X 2,6 GHz Procesor, network: Gigabyte 1 Gb/s, and the software used is paradigm, product: Seismic Processing and Imaging. The third fault obtained in this study in accordance with the geological information derived from previous research conducted by geologists. The second general direction is northwest-southeast direction represented by Baribis fault, fault-fault in the Valley Cimandiri and Gunung Walat. This direction is often known as the directions Meratus (Meratus Trend. Meratus directions interpreted as directions that follow the pattern of continuous arc Cretaceous age to Meratus in Kalimantan.

Relationships between anopheline mosquitoes and topography in West Timor and Java, Indonesia.

Science.gov (United States)

Ndoen, Ermi; Wild, Clyde; Dale, Pat; Sipe, Neil; Dale, Mike

2010-08-26

Malaria is a serious health issue in Indonesia. Mosquito control is one aspect of an integrated malaria management programme. To focus resources on priority areas, information is needed about the vectors and their habitats. This research aimed to identify the relationship between anopheline mosquitoes and topography in West Timor and Java. Study areas were selected in three topographic types in West Timor and Java. These were: coastal plain, hilly (rice field) and highland. Adult mosquitoes were captured landing on humans identified to species level and counted. Eleven species were recorded, four of which were significant for malaria transmission: Anopheles aconitus, Anopheles barbirostris, Anopheles subpictus and Anopheles sundaicus. Each species occupied different topographies, but only five were significantly associated: Anopheles annularis, Anopheles vagus and Anopheles subpictus (Java only) with hilly rice fields; Anopheles barbirostris, Anopheles maculatus and Anopheles subpictus (West Timor only) with coastal areas. Information on significant malaria vectors associated with specific topography is useful for planning the mosquito control aspect of malaria management.

Pixelman: a multi-platform data acquisition and processing software package for Medipix2, Timepix and Medipix3 detectors

International Nuclear Information System (INIS)

Turecek, D; Holy, T; Jakubek, J; Pospisil, S; Vykydal, Z

2011-01-01

The semiconductor pixel detectors Medipix2, Timepix and Medipix3 (256x256 square pixels, 55x55 μm each) are superior imaging devices in terms of spatial resolution, linearity and dynamic range. This makes them suitable for various applications such as radiography, neutronography, micro-tomography and X-ray dynamic defectoscopy. In order to control and manage such complex measurements a multi-platform software package for acquisition and data processing with a Java graphical user interface has been developed. The functionality of the original version of Pixelman package has been upgraded and extended to include the new medipix devices. The software package can be run on Microsoft Windows, Linux and Mac OS X operating systems. The architecture is very flexible and the functionality can be extended by plugins in C++, Java or combinations of both. The software package may be used as a distributed acquisition system using computers with different operating systems over a local network or the Internet.

Pixelman: a multi-platform data acquisition and processing software package for Medipix2, Timepix and Medipix3 detectors

Energy Technology Data Exchange (ETDEWEB)

Turecek, D; Holy, T; Jakubek, J; Pospisil, S; Vykydal, Z, E-mail: daniel.turecek@utef.cvut.cz [Institute of Experimental and Applied Physics, Czech Technical University in Prague, Horska 3a/22, 12800 Prague 2 (Czech Republic)

2011-01-15

The semiconductor pixel detectors Medipix2, Timepix and Medipix3 (256x256 square pixels, 55x55 {mu}m each) are superior imaging devices in terms of spatial resolution, linearity and dynamic range. This makes them suitable for various applications such as radiography, neutronography, micro-tomography and X-ray dynamic defectoscopy. In order to control and manage such complex measurements a multi-platform software package for acquisition and data processing with a Java graphical user interface has been developed. The functionality of the original version of Pixelman package has been upgraded and extended to include the new medipix devices. The software package can be run on Microsoft Windows, Linux and Mac OS X operating systems. The architecture is very flexible and the functionality can be extended by plugins in C++, Java or combinations of both. The software package may be used as a distributed acquisition system using computers with different operating systems over a local network or the Internet.

A numerical library in Java for scientists and engineers

CERN Document Server

Lau, Hang T

2003-01-01

At last researchers have an inexpensive library of Java-based numeric procedures for use in scientific computation. The first and only book of its kind, A Numeric Library in Java for Scientists and Engineers is a translation into Java of the library NUMAL (NUMerical procedures in ALgol 60). This groundbreaking text presents procedural descriptions for linear algebra, ordinary and partial differential equations, optimization, parameter estimation, mathematical physics, and other tools that are indispensable to any dynamic research group. The book offers test programs that allow researchers to execute the examples provided; users are free to construct their own tests and apply the numeric procedures to them in order to observe a successful computation or simulate failure. The entry for each procedure is logically presented, with name, usage parameters, and Java code included. This handbook serves as a powerful research tool, enabling the performance of critical computations in Java. It stands as a cost-effi...

Java facilities in processing XML files - JAXB and generating PDF reports

Directory of Open Access Journals (Sweden)

Danut-Octavian SIMION

2008-01-01

Full Text Available The paper presents the Java programming language facilities in working with XML files using JAXB (The Java Architecture for XML Binding technology and generating PDF reports from XML files using Java objects. The XML file can be an existing one and could contain the data about an entity (Clients for example or it might be the result of a SELECT-SQL statement. JAXB generates JAVA classes through xs rules and a Marshalling, Unmarshalling compiler. The PDF file is build from a XML file and uses XSL-FO formatting file and a Java ResultSet object.

GSI operation software: migration from OpenVMS TO Linux

International Nuclear Information System (INIS)

Huhmann, R.; Froehlich, G.; Juelicher, S.; Schaa, V.R.W.

2012-01-01

The current operation software at GSI, controlling the linac, beam transfer lines, synchrotron and storage ring, has been developed over a period of more than two decades using OpenVMS on Alpha-Workstations. The GSI accelerator facilities will serve as an injector chain for the new FAIR accelerator complex for which a control system is currently developed. To enable reuse and integration of parts of the distributed GSI software system, in particular the linac operation software, within the FAIR control system, the corresponding software components must be migrated to Linux. Inter-operability with FAIR controls applications is achieved by adding a generic middle-ware interface accessible from Java applications. For porting applications to Linux a set of libraries and tools has been developed covering the necessary OpenVMS system functionality. Currently, core applications and services are already ported or rewritten and functionally tested but not in operational usage. This paper presents the current status of the project and concepts for putting the migrated software into operation. (authors)

Diseño de un Software de Intermediación de Comunicación para Sistemas Distribuidos de Tiempo Real Críticos en Java

Directory of Open Access Journals (Sweden)

Daniel Tejera

2013-04-01

Full Text Available Resumen: Las facilidades e independencia de plataforma de Java han generado un gran interés en la comunidad de tiempo real. Dicho interés se ha reflejado en la especificación RTSJ (Real-Time Specification for Java, que extiende y adapta el lenguaje Java para permitir el desarrollo de sistemas de tiempo real. Adicionalmente, se han desarrollado perfiles de RTSJ para garantizar la predecibilidad en sistemas de tiempo real críticos. Sin embargo, RTSJ y sus perfiles no proporcionan facilidades para sistemas distribuidos. El objetivo de este trabajo es afrontar dicha limitación definiendo un nuevo modelo de RMI (Remote Method Invocation basado en los principales perfiles de RTSJ para sistemas de tiempo real crítico. Este trabajo presenta el diseño y la implementación de RMI-HRT (RMI-Hard Real-Time que está enfocado a sistemas de tiempo real crítico con requisitos de alta integridad. Abstract: Distributed real-time embedded systems are becoming increasingly important to society. More demands will be made on them and greater reliance will be placed on the delivery of their services. A relevant subset of them is high-integrity or hard real-time systems, where failure can cause loss of life, environmental harm, or significant financial loss.Additionally, the evolution of communication networks and paradigms as well as the necessity of demanding processing power and fault tolerance, motivated the interconnection between electronic devices; many of the communications have the possibility of transferring data at a high speed. The concept of distributed systems emerged as systems where different parts are executed on several nodes that interact with each other via a communication network.Java's popularity, facilities and platform independence have made it an interesting language for the real-time and embedded community. This was the motivation for the development of RTSJ (Real-Time Specification for Java, which is a language extension intended to

JColorGrid: software for the visualization of biological measurements.

Science.gov (United States)

Joachimiak, Marcin P; Weisman, Jennifer L; May, Barnaby Ch

2006-04-27

Two-dimensional data colourings are an effective medium by which to represent three-dimensional data in two dimensions. Such "color-grid" representations have found increasing use in the biological sciences (e.g. microarray 'heat maps' and bioactivity data) as they are particularly suited to complex data sets and offer an alternative to the graphical representations included in traditional statistical software packages. The effectiveness of color-grids lies in their graphical design, which introduces a standard for customizable data representation. Currently, software applications capable of generating limited color-grid representations can be found only in advanced statistical packages or custom programs (e.g. micro-array analysis tools), often associated with steep learning curves and requiring expert knowledge. Here we describe JColorGrid, a Java library and platform independent application that renders color-grid graphics from data. The software can be used as a Java library, as a command-line application, and as a color-grid parameter interface and graphical viewer application. Data, titles, and data labels are input as tab-delimited text files or Microsoft Excel spreadsheets and the color-grid settings are specified through the graphical interface or a text configuration file. JColorGrid allows both user graphical data exploration as well as a means of automatically rendering color-grids from data as part of research pipelines. The program has been tested on Windows, Mac, and Linux operating systems, and the binary executables and source files are available for download at http://jcolorgrid.ucsf.edu.

Qualitative Evaluation of the Java Intelligent Tutoring System

Directory of Open Access Journals (Sweden)

Edward Sykes

2005-10-01

Full Text Available In an effort to support the growing trend of the Java programming language and to promote web-based personalized education, the Java Intelligent Tutoring System (JITS was designed and developed. This tutoring system is unique in a number of ways. Most Intelligent Tutoring Systems require the teacher to author problems with corresponding solutions. JITS, on the other hand, requires the teacher to only supply the problem and problem specification. JITS is designed to "intelligently" examine the student's submitted code and determines appropriate feedback based on a number of factors such as JITS' cognitive model of the student, the student's skill level, and problem details. JITS is intended to be used by beginner programming students in their first year of College or University. This paper discusses the important aspects of the design and development of JITS, the qualitative methods and procedures, and findings. Research was conducted at the Sheridan Institute of Technology and Advanced Learning, Ontario, Canada.

Org.Lcsim: Event Reconstruction in Java

International Nuclear Information System (INIS)

Graf, Norman

2011-01-01

Maximizing the physics performance of detectors being designed for the International Linear Collider, while remaining sensitive to cost constraints, requires a powerful, efficient, and flexible simulation, reconstruction and analysis environment to study the capabilities of a large number of different detector designs. The preparation of Letters Of Intent for the International Linear Collider involved the detailed study of dozens of detector options, layouts and readout technologies; the final physics benchmarking studies required the reconstruction and analysis of hundreds of millions of events. We describe the Java-based software toolkit (org.lcsim) which was used for full event reconstruction and analysis. The components are fully modular and are available for tasks from digitization of tracking detector signals through to cluster finding, pattern recognition, track-fitting, calorimeter clustering, individual particle reconstruction, jet-finding, and analysis. The detector is defined by the same xml input files used for the detector response simulation, ensuring the simulation and reconstruction geometries are always commensurate by construction. We discuss the architecture as well as the performance.

ImatraNMR: Novel software for batch integration and analysis of quantitative NMR spectra

Science.gov (United States)

Mäkelä, A. V.; Heikkilä, O.; Kilpeläinen, I.; Heikkinen, S.

2011-08-01

Quantitative NMR spectroscopy is a useful and important tool for analysis of various mixtures. Recently, in addition of traditional quantitative 1D 1H and 13C NMR methods, a variety of pulse sequences aimed for quantitative or semiquantitative analysis have been developed. To obtain actual usable results from quantitative spectra, they must be processed and analyzed with suitable software. Currently, there are many processing packages available from spectrometer manufacturers and third party developers, and most of them are capable of analyzing and integration of quantitative spectra. However, they are mainly aimed for processing single or few spectra, and are slow and difficult to use when large numbers of spectra and signals are being analyzed, even when using pre-saved integration areas or custom scripting features. In this article, we present a novel software, ImatraNMR, designed for batch analysis of quantitative spectra. In addition to capability of analyzing large number of spectra, it provides results in text and CSV formats, allowing further data-analysis using spreadsheet programs or general analysis programs, such as Matlab. The software is written with Java, and thus it should run in any platform capable of providing Java Runtime Environment version 1.6 or newer, however, currently it has only been tested with Windows and Linux (Ubuntu 10.04). The software is free for non-commercial use, and is provided with source code upon request.

Shopping Association Of Government Education Development In East Java

OpenAIRE

Muhamamd Guzali Tafalas; Deddy T. Tikson; Baharuddin; Hj. Hasniati

2017-01-01

The purpose of this study is to explain and analyze in detail The positive association Government spending in education PP with a Gross Enrolment Ratio GER and net enrollment ratio NER in East Java Province. Government spending on education is less associated significantly to the gross enrollment ratio at primary education. gross enrollment GER especially at the level of elementary education. As for the middle and high school level of education government spending on education was significant...

Non-intrusive Instance Level Software Composition

NARCIS (Netherlands)

Hatun, Kardelen

2014-01-01

A software system is comprised of parts, which interact through shared interfaces. Certain qualities of integration, such as loose-coupling, requiring minimal changes to the software and fine-grained localisation of dependencies, have impact on the overall software quality. Current general-purpose

(Automated) software modularization using community detection

DEFF Research Database (Denmark)

Hansen, Klaus Marius; Manikas, Konstantinos

2015-01-01

The modularity of a software system is known to have an effect on, among other, development effort, change impact, and technical debt. Modularizing a specific system and evaluating this modularization is, however, challenging. In this paper, we apply community detection methods to the graph...... of class dependencies in software systems to find optimal modularizations through communities. We evaluate this approach through a study of 111 Java systems contained in the Qualitas Corpus. We found that using the modularity function of Newman with an Erdős-Rényi null-model and using the community...... detection algorithm of Reichardt and Bornholdt improved community quality for all systems, that coupling decreased for 99 of the systems, and that coherence increased for 102 of the systems. Furthermore, the modularity function correlates with existing metrics for coupling and coherence....

Automation Hardware & Software for the STELLA Robotic Telescope

Science.gov (United States)

Weber, M.; Granzer, Th.; Strassmeier, K. G.

The STELLA telescope (a joint project of the AIP, Hamburger Sternwarte and the IAC) is to operate in fully robotic mode, with no human interaction necessary for regular operation. Thus, the hardware must be kept as simple as possible to avoid unnecessary failures, and the environmental conditions must be monitored accurately to protect the telescope in case of bad weather. All computers are standard PCs running Linux, and communication with specialized hardware is done via a RS232/RS485 bus system. The high level (java based) control software consists of independent modules to ease bug-tracking and to allow the system to be extended without changing existing modules. Any command cycle consists of three messages, the actual command sent from the central node to the operating device, an immediate acknowledge, and a final done message, both sent back from the receiving device to the central node. This reply-splitting allows a direct distinction between communication problems (no acknowledge message) and hardware problems (no or a delayed done message). To avoid bug-prone packing of all the sensor-analyzing software into a single package, each sensor-reading and interaction with other sensors is done within a self-contained thread. Weather-decision making is therefore totally decoupled from the core control software to avoid dead-locks in the core module.

The Operational Semantics of a Java Secure Processor

NARCIS (Netherlands)

Hartel, Pieter H.; Butler, M.J.; Levy, M.; Alves-Foss, J.

1999-01-01

A formal specification of a Java Secure Processor is presented, which is mechanically checked for type consistency, well formedness and operational conservativity. The specification is executable and it is used to animate and study the behaviour of sample Java programs. The purpose of the semantics

EOS MLS Level 1B Data Processing Software. Version 3

Science.gov (United States)

Perun, Vincent S.; Jarnot, Robert F.; Wagner, Paul A.; Cofield, Richard E., IV; Nguyen, Honghanh T.; Vuu, Christina

2011-01-01

This software is an improvement on Version 2, which was described in EOS MLS Level 1B Data Processing, Version 2.2, NASA Tech Briefs, Vol. 33, No. 5 (May 2009), p. 34. It accepts the EOS MLS Level 0 science/engineering data, and the EOS Aura spacecraft ephemeris/attitude data, and produces calibrated instrument radiances and associated engineering and diagnostic data. This version makes the code more robust, improves calibration, provides more diagnostics outputs, defines the Galactic core more finely, and fixes the equator crossing. The Level 1 processing software manages several different tasks. It qualifies each data quantity using instrument configuration and checksum data, as well as data transmission quality flags. Statistical tests are applied for data quality and reasonableness. The instrument engineering data (e.g., voltages, currents, temperatures, and encoder angles) is calibrated by the software, and the filter channel space reference measurements are interpolated onto the times of each limb measurement with the interpolates being differenced from the measurements. Filter channel calibration target measurements are interpolated onto the times of each limb measurement, and are used to compute radiometric gain. The total signal power is determined and analyzed by each digital autocorrelator spectrometer (DACS) during each data integration. The software converts each DACS data integration from an autocorrelation measurement in the time domain into a spectral measurement in the frequency domain, and estimates separately the spectrally, smoothly varying and spectrally averaged components of the limb port signal arising from antenna emission and scattering effects. Limb radiances are also calibrated.

Software package for the design and analysis of DNA origami structures

DEFF Research Database (Denmark)

Andersen, Ebbe Sloth; Nielsen, Morten Muhlig; Dong, Mingdong

was observed on the mica surface with a fraction of the dolphin nanostructures showing extensive tail flexibility of approximately 90 degrees. The Java editor and tools are free software distributed under the GNU license. The open architecture of the editor makes it easy for the scientific community......A software package was developed for the semi-automated design of DNA origamis and further data analysis of Atomic Force Microscopy (AFM) images. As an example, we design the shape of a bottlenose dolphin and analyze it by means of high resolution AFM imaging. A high yield of DNA dolphins...... to contribute new tools and functionalities. Documentation, tutorials and software will be made available online....

An Extensible Software Infrastructure for Computer Aided Custom Monitoring of Patients in Smart Homes

OpenAIRE

Ritwik Dutta; Marilyn Wolf

2015-01-01

This paper describes the tradeoffs and the design from scratch of a self-contained, easy-to-use health dashboard software system that provides customizable data tracking for patients in smart homes. The system is made up of different software modules and comprises a front-end and a back-end component. Built with HTML, CSS, and JavaScript, the front-end allows adding users, logging into the system, selecting metrics, and specifying health goals. The backend consists of a N...

JavaScript and jQuery for data analysis and visualization

CERN Document Server

Raasch, Jon; Ogievetsky, Vadim; Lowery, Joseph

2014-01-01

Go beyond design concepts-build dynamic data visualizations using JavaScript JavaScript and jQuery for Data Analysis and Visualization goes beyond design concepts to show readers how to build dynamic, best-of-breed visualizations using JavaScript-the most popular language for web programming. The authors show data analysts, developers, and web designers how they can put the power and flexibility of modern JavaScript libraries to work to analyze data and then present it using best-of-breed visualizations. They also demonstrate the use of each technique with real-world use cases, showing how to

Sample Development on Java Smart-Card Electronic Wallet Application

OpenAIRE

Toma Cristian

2009-01-01

In this paper, are highlighted concepts as: complete Java card application, life cycle of an applet, and a practical electronic wallet sample implemented in Java card technology. As a practical approach it would be interesting building applets for ID, Driving License, Health-Insurance smart cards, for encrypt and digitally sign documents, for E-Commerce and for accessing critical resources in government and military field. The end of this article it is presented a java card electronic wallet ...

Multi-level learning: improving the prediction of protein, domain and residue interactions by allowing information flow between levels

Directory of Open Access Journals (Sweden)

McDermott Drew

2009-08-01

opportunities for further research. Availability The software and a readme file can be downloaded at http://networks.gersteinlab.org/mll. The programs are written in Java, and can be run on any platform with Java 1.4 or higher and Apache Ant 1.7.0 or higher installed. The software can be used without a license.

Model checking a cache coherence protocol for a Java DSM implementation

NARCIS (Netherlands)

J. Pang; W.J. Fokkink (Wan); R. Hofman (Rutger); R. Veldema

2007-01-01

textabstractJackal is a fine-grained distributed shared memory implementation of the Java programming language. It aims to implement Java's memory model and allows multithreaded Java programs to run unmodified on a distributed memory system. It employs a multiple-writer cache coherence

Chip-Multiprocessor Hardware Locks for Safety-Critical Java

DEFF Research Database (Denmark)

Strøm, Torur Biskopstø; Puffitsch, Wolfgang; Schoeberl, Martin

2013-01-01

and may void a task set's schedulability. In this paper we present a hardware locking mechanism to reduce the synchronization overhead. The solution is implemented for the chip-multiprocessor version of the Java Optimized Processor in the context of safety-critical Java. The implementation is compared...

Evaluation of Static JavaScript Call Graph Algorithms

NARCIS (Netherlands)

J.-J. Dijkstra (Jorryt-Jan)

2014-01-01

htmlabstractThis thesis consists of a replication study in which two algorithms to compute JavaScript call graphs have been implemented and evaluated. Existing IDE support for JavaScript is hampered due to the dynamic nature of the language. Previous studies partially solve call graph computation

Atmospheric sulfur and nitrogen in West Java

International Nuclear Information System (INIS)

Ayers, G.P.; Gillett, R.W.; Ginting, N.; Hopper, M.; Selleck, P.W.; Tapper, N.

1995-01-01

Wet-only rainwater composition on a weekly basis was determined at four sites in West Java, Indonesia, from June 1991 to June 1992. Three sites were near the extreme western end of Java, surrounding a coal-fired power station at Suralaya. The fourth site was ∼ 100 km to the east in the Indonesian capital, Jakarta. Over the 12 months study period wet deposition of sulfate at the three western sites varied between 32-46 meq m -2 while nitrate varied between 10-14 meq m -2 . Wet deposition at the Jakarta site was systematically higher, at 56 meq m -2 for sulfate and 20 meq m -2 for nitrate. Since sulfate and nitrate wet deposition fluxes in the nearby and relatively unpopulated regions of typical Australia are both only ∼ 5 meq m -2 anthropogenic emissions of S and N apparently cause significant atmospheric acidification in Java. It is possible that total acid deposition fluxes (of S and N) in parts of Java are comparable with those responsible for environmental degradation in acid-sensitive parts of Europe and North America. 19 refs., 3 tabs

Instrument Control (iC) – An Open-Source Software to Automate Test Equipment

Science.gov (United States)

Pernstich, K. P.

2012-01-01

It has become common practice to automate data acquisition from programmable instrumentation, and a range of different software solutions fulfill this task. Many routine measurements require sequential processing of certain tasks, for instance to adjust the temperature of a sample stage, take a measurement, and repeat that cycle for other temperatures. This paper introduces an open-source Java program that processes a series of text-based commands that define the measurement sequence. These commands are in an intuitive format which provides great flexibility and allows quick and easy adaptation to various measurement needs. For each of these commands, the iC-framework calls a corresponding Java method that addresses the specified instrument to perform the desired task. The functionality of iC can be extended with minimal programming effort in Java or Python, and new measurement equipment can be addressed by defining new commands in a text file without any programming. PMID:26900522

Tooth enamel surface micro-hardness with dual species Streptococcus biofilm after exposure to Java turmeric (Curcuma xanthorrhiza Roxb.) extract

Science.gov (United States)

Isjwara, F. R. G.; Hasanah, S. N.; Utami, Sri; Suniarti, D. F.

2017-08-01

Streptococcus biofilm on tooth surfaces can decrease mouth environment pH, thus causing enamel demineralization that can lead to dental caries. Java Turmeric extract has excellent antibacterial effects and can maintain S. mutans biofilm pH at neutral levels for 4 hours. To analyze the effect of Java Turmeric extract on tooth enamel micro-hardness, the Java Turmeric extract was added on enamel tooth samples with Streptococcus dual species biofilm (S. sanguinis and S. mutans). The micro-hardness of enamel was measured by Knoop Hardness Tester. Results showed that Curcuma xanthorrhiza Roxb. could not maintain tooth enamel surface micro-hardness. It is concluded that Java Turmeric extract ethanol could not inhibit the hardness of enamel with Streptococcus dual species biofilm.

Quantitation of magnetic resonance spectroscopy signals: the jMRUI software package

Czech Academy of Sciences Publication Activity Database

Stefan, D.; Di Cesare, F.; Andrasescu, A.; Popa, E.; Lazariev, A.; Vescovo, E.; Štrbák, Oliver; Williams, S.; Starčuk jr., Zenon; Cabanas, M.; van Ormondt, D.; Graveron-Demilly, D.

2009-01-01

Roč. 20, č. 10 (2009), 104035:1-9 ISSN 0957-0233 Grant - others:EC 6FP(XE) MRTN-CT-2006-035801 Source of funding: R - rámcový projekt EK Keywords : MR spectroscopy * MRS * MRSI * HRMAS-NMR * jMRUI software package * Java * plug-ins * quantitation Subject RIV: JA - Electronics ; Optoelectronics, Electrical Engineering Impact factor: 1.317, year: 2009

Model checking a cache coherence protocol of a Java DSM implementation

NARCIS (Netherlands)

Pang, J.; Fokkink, W.J.; Hofman, R.; Veldema, R.S.

2007-01-01

Jackal is a fine-grained distributed shared memory implementation of the Java programming language. It aims to implement Java's memory model and allows multithreaded Java programs to run unmodified on a distributed memory system. It employs a multiple-writer cache coherence protocol. In this paper,

Women's status and child survival in West Java, Indonesia.

Science.gov (United States)

Widayatun

1991-03-01

This study is introduced by a literature review of the concept of women's status, and related factors that determine infant and child mortality. Women's status is primarily defined by education, occupation and economic activity, which affect women's decision-making in the home and their independence in larger society. Cluster analysis was used to identify geographical patterns of standardized women's status variables among 20 regencies and 4 municipalities in West Java. Euclidian distances were computed between pairs of regencies across the 13 indicators. Pearson's correlations and multiple regression were used to compare associations between women's status variables and infant and child mortality, after controlling for economic development. Using data from the 1980 census, the study demonstrated large regional variations in women's status in West Java, with higher status in both the household and in society in the south and central highlands than in the north and west. Women's status is closely related to infant and child mortality, independent of the level of development. There was 1 notable exception, the municipality of Bogor, where infant and child mortality were higher than average rates for the cluster of areas with higher women's status. The results suggest that improved education, and increase in age at 1st marriage are key elements for improving the status of women in West Java.

jmzTab: a java interface to the mzTab data standard.

Science.gov (United States)

Xu, Qing-Wei; Griss, Johannes; Wang, Rui; Jones, Andrew R; Hermjakob, Henning; Vizcaíno, Juan Antonio

2014-06-01

mzTab is the most recent standard format developed by the Proteomics Standards Initiative. mzTab is a flexible tab-delimited file that can capture identification and quantification results coming from MS-based proteomics and metabolomics approaches. We here present an open-source Java application programming interface for mzTab called jmzTab. The software allows the efficient processing of mzTab files, providing read and write capabilities, and is designed to be embedded in other software packages. The second key feature of the jmzTab model is that it provides a flexible framework to maintain the logical integrity between the metadata and the table-based sections in the mzTab files. In this article, as two example implementations, we also describe two stand-alone tools that can be used to validate mzTab files and to convert PRIDE XML files to mzTab. The library is freely available at http://mztab.googlecode.com. © 2014 The Authors PROTEOMICS Published by Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.

Generating Safety-Critical PLC Code From a High-Level Application Software Specification

Science.gov (United States)

2008-01-01

The benefits of automatic-application code generation are widely accepted within the software engineering community. These benefits include raised abstraction level of application programming, shorter product development time, lower maintenance costs, and increased code quality and consistency. Surprisingly, code generation concepts have not yet found wide acceptance and use in the field of programmable logic controller (PLC) software development. Software engineers at Kennedy Space Center recognized the need for PLC code generation while developing the new ground checkout and launch processing system, called the Launch Control System (LCS). Engineers developed a process and a prototype software tool that automatically translates a high-level representation or specification of application software into ladder logic that executes on a PLC. All the computer hardware in the LCS is planned to be commercial off the shelf (COTS), including industrial controllers or PLCs that are connected to the sensors and end items out in the field. Most of the software in LCS is also planned to be COTS, with only small adapter software modules that must be developed in order to interface between the various COTS software products. A domain-specific language (DSL) is a programming language designed to perform tasks and to solve problems in a particular domain, such as ground processing of launch vehicles. The LCS engineers created a DSL for developing test sequences of ground checkout and launch operations of future launch vehicle and spacecraft elements, and they are developing a tabular specification format that uses the DSL keywords and functions familiar to the ground and flight system users. The tabular specification format, or tabular spec, allows most ground and flight system users to document how the application software is intended to function and requires little or no software programming knowledge or experience. A small sample from a prototype tabular spec application is

JavaScript: Data Visualizations

Science.gov (United States)

D3 is a JavaScript library that, in a manner similar to jQuery library, allows direct inspection and manipulation of the Document Object Model, but is intended for the primary purpose of data visualization.

Fast simulation and topological vertex finding in JAVA

International Nuclear Information System (INIS)

Walkowiak, Wolfgang

2001-01-01

An overview of the fast Monte Carlo simulation for NLC detector studies as currently provided in the Java Analysis Studio environment is presented. Special emphasis is given to the simulation of tracks. In addition, the SLD collaboration's topological vertex finding algorithm (ZVTOP) has been implemented in the Java Analysis Studio framework

Improving Tools for JavaScript Programmers (Position Paper)

DEFF Research Database (Denmark)

Andreasen, Esben; Feldthaus, Asger; Jensen, Simon Holm

We present an overview of three research projects that all aim to provide better tools for JavaScript web application programmers1: TAJS, which infers static type information for JavaScript applications using dataflow analysis; JSRefac- tor, which enables sound code refactorings; and Artemis, which...... provides high-coverage automated testing....

Instrument hardware and software upgrades at IPNS

International Nuclear Information System (INIS)

Worlton, Thomas; Hammonds, John; Mikkelson, D.; Mikkelson, Ruth; Porter, Rodney; Tao, Julian; Chatterjee, Alok

2006-01-01

IPNS is in the process of upgrading their time-of-flight neutron scattering instruments with improved hardware and software. The hardware upgrades include replacing old VAX Qbus and Multibus-based data acquisition systems with new systems based on VXI and VME. Hardware upgrades also include expanded detector banks and new detector electronics. Old VAX Fortran-based data acquisition and analysis software is being replaced with new software as part of the ISAW project. ISAW is written in Java for ease of development and portability, and is now used routinely for data visualization, reduction, and analysis on all upgraded instruments. ISAW provides the ability to process and visualize the data from thousands of detector pixels, each having thousands of time channels. These operations can be done interactively through a familiar graphical user interface or automatically through simple scripts. Scripts and operators provided by end users are automatically included in the ISAW menu structure, along with those distributed with ISAW, when the application is started

Featureous: A Tool for Feature-Centric Analysis of Java Software

DEFF Research Database (Denmark)

Olszak, Andrzej; Jørgensen, Bo Nørregaard

2010-01-01

Feature-centric comprehension of source code is necessary for incorporating user-requested modifications during software evolution and maintenance. However, such comprehension is difficult to achieve in case of large object-oriented programs due to the size, complexity, and implicit character...... of mappings between features and source code. To support programmers in overcoming these difficulties, we present a feature-centric analysis tool, Featureous. Our tool extends the NetBeans IDE with mechanisms for efficient location of feature implementations in legacy source code, and an extensive analysis...

Worst-Case Execution Time Based Optimization of Real-Time Java Programs

DEFF Research Database (Denmark)

Hepp, Stefan; Schoeberl, Martin

2012-01-01

optimization is method in lining. It is especially important for languages, like Java, where small setter and getter methods are considered good programming style. In this paper we present and explore WCET driven in lining of Java methods. We use the WCET analysis tool for the Java processor JOP to guide...

The ALMA Common Software as a Basis for a Distributed Software Development

Science.gov (United States)

Raffi, Gianni; Chiozzi, Gianluca; Glendenning, Brian

The Atacama Large Millimeter Array (ALMA) is a joint project involving astronomical organizations in Europe, North America and Japan. ALMA will consist of 64 12-m antennas operating in the millimetre and sub-millimetre wavelength range, with baselines of more than 10 km. It will be located at an altitude above 5000 m in the Chilean Atacama desert. The ALMA Computing group is a joint group with staff scattered on 3 continents and is responsible for all the control and data flow software related to ALMA, including tools ranging from support of proposal preparation to archive access of automatically created images. Early in the project it was decided that an ALMA Common Software (ACS) would be developed as a way to provide to all partners involved in the development a common software platform. The original assumption was that some key middleware like communication via CORBA and the use of XML and Java would be part of the project. It was intended from the beginning to develop this software in an incremental way based on releases, so that it would then evolve into an essential embedded part of all ALMA software applications. In this way we would build a basic unity and coherence into a system that will have been developed in a distributed fashion. This paper evaluates our progress after 1.5 year of work, following a few tests and preliminary releases. It analyzes the advantages and difficulties of such an ambitious approach, which creates an interface across all the various control and data flow applications.

Synchronization resources in heterogeneous environments: Time-sharing, real-time and Java

Energy Technology Data Exchange (ETDEWEB)

Pereira, A. [Asociacion EURATOM/CIEMAT para Fusion, CIEMAT Edificio 66, Avda. Complutense, 22, 28040 Madrid (Spain)]. E-mail: augusto.pereira@ciemat.es; Vega, J. [Asociacion EURATOM/CIEMAT para Fusion, CIEMAT Edificio 66, Avda. Complutense, 22, 28040 Madrid (Spain); Pacios, L. [Asociacion EURATOM/CIEMAT para Fusion, CIEMAT Edificio 66, Avda. Complutense, 22, 28040 Madrid (Spain); Sanchez, E. [Asociacion EURATOM/CIEMAT para Fusion, CIEMAT Edificio 66, Avda. Complutense, 22, 28040 Madrid (Spain); Portas, A. [Asociacion EURATOM/CIEMAT para Fusion, CIEMAT Edificio 66, Avda. Complutense, 22, 28040 Madrid (Spain)

2006-07-15

The asynchronous event distribution system (AEDS) was built to provide synchronization resources within the TJ-II local area network. It is a software system developed to add 'soft synchronization' capabilities to the TJ-II data acquisition, control and analysis environments. 'Soft synchronization' signifies that AEDS is not a real-time system. In fact, AEDS is based on TCP/IP over ETHERNET networks. However, its response time is adequate for practical purposes when synchronization requirements can support some delay between event dispatch and message reception. Event broadcasters (or synchronization servers in AEDS terminology) are Windows computers. Destination computers (or synchronization clients) were also Windows machines in the first version of AEDS. However, this fact imposed a very important limitation on synchronization capabilities. To overcome this situation, synchronization clients for different environments have been added to AEDS: for time-sharing operating systems (Unix and Linux), real-time operating systems (OS-9 and VxWorks) and Java applications. These environments have different synchronization primitives, requiring different approaches to provide the required uniform functionality. This has been achieved with POSIX thread library synchronization primitives (mutex and condition variables) on Unix/Linux systems, IPC mechanisms for concurrent processes on OS-9 and VxWorks real-time operating systems, and 'synchronized-wait/notify' primitives on Java virtual machines.

Kala defanged: Managing power in Java away from the centre

Directory of Open Access Journals (Sweden)

Andrew Beatty

2012-09-01

Full Text Available If discussions of power in Indonesia have been too Java-centric, power talk about Java has been equally overcentralized. This article presents an alternative view to the top-down, hierarchical, exemplary-centre approach of Anderson, Geertz and others: the view from Banyuwangi in East Java. Through an analysis of local rituals, popular theatre and political action it proposes a different model based on consensus, relativism, and ritual containment.

Instant Java password and authentication security

CERN Document Server

Mayoral, Fernando

2013-01-01

Filled with practical, step-by-step instructions and clear explanations for the most important and useful tasks. This book takes a hands-on approach to Java-based password hashing and authentication, detailing advanced topics in a recipe format.This book is ideal for developers new to user authentication and password security, and who are looking to get a good grounding in how to implement it in a reliable way.It's assumed that the reader will have some experience in Java already, as well as being familiar with the basic idea behind user authentication.

ROOT I/O in JavaScript

International Nuclear Information System (INIS)

Bellenot, Bertrand

2012-01-01

ROOT is used by almost all experiments throughout High Energy and Nuclear Physics to write, read and analyse data. As use of mobile devices (tablets, smart phones) is becoming more and more popular, offering a portable way of monitoring or inspecting ROOT files from any web browser, without having to install any application or library on the server side or on the client side is important. To achieve this, a JavaScript I/O library is being developed. The graphic part is done by using a third-party JavaScript visualization library.

Cost Analysis for Real-time Java Scoped-memory Areas

Directory of Open Access Journals (Sweden)

Delvin Defoe

2007-08-01

Full Text Available Java has recently joined C and C++ as a development platform for real-time and embedded applications. Java's garbage collection, while generally a useful feature, can be problematic for these applications: garbage collection occurs at unpredictable times and its latency is typically unbounded. This can compromise necessary real-time guarantees. To overcome these limitations, the Real-Time for Java Expert Group (RTJEG proposed the Real-Time Specification for Java (RTSJ, which introduced new memory models and new threads to utilize those models. One such memory model uses scoped-memory areas, which work best in the context of a NoHeapRealtimeThread (NHRT. Although much work has been done with scoped-memory areas and NHRTs, there is no system-independent analysis of their costs. In this article we present an asymptotic analysis for RTSJ scoped-memory areas and NHRTs.

Creating Electronic Books-Chapters for Computers and Tablets Using Easy Java/JavaScript Simulations, EjsS Modeling Tool

OpenAIRE

Wee, Loo Kang

2015-01-01

This paper shares my journey (tools used, design principles derived and modeling pedagogy implemented) when creating electronic books-chapters (epub3 format) for computers and tablets using Easy Java/JavaScript Simulations, (old name EJS, new EjsS) Modeling Tool. The theory underpinning this work grounded on learning by doing through dynamic and interactive simulation-models that can be more easily made sense of instead of the static nature of printed materials. I started combining related co...

JColorGrid: software for the visualization of biological measurements

Directory of Open Access Journals (Sweden)

May Barnaby CH

2006-04-01

Full Text Available Abstract Background Two-dimensional data colourings are an effective medium by which to represent three-dimensional data in two dimensions. Such "color-grid" representations have found increasing use in the biological sciences (e.g. microarray 'heat maps' and bioactivity data as they are particularly suited to complex data sets and offer an alternative to the graphical representations included in traditional statistical software packages. The effectiveness of color-grids lies in their graphical design, which introduces a standard for customizable data representation. Currently, software applications capable of generating limited color-grid representations can be found only in advanced statistical packages or custom programs (e.g. micro-array analysis tools, often associated with steep learning curves and requiring expert knowledge. Results Here we describe JColorGrid, a Java library and platform independent application that renders color-grid graphics from data. The software can be used as a Java library, as a command-line application, and as a color-grid parameter interface and graphical viewer application. Data, titles, and data labels are input as tab-delimited text files or Microsoft Excel spreadsheets and the color-grid settings are specified through the graphical interface or a text configuration file. JColorGrid allows both user graphical data exploration as well as a means of automatically rendering color-grids from data as part of research pipelines. Conclusion The program has been tested on Windows, Mac, and Linux operating systems, and the binary executables and source files are available for download at http://jcolorgrid.ucsf.edu.

Java advanced medical image toolkit

International Nuclear Information System (INIS)

Saunder, T.H.C.; O'Keefe, G.J.; Scott, A.M.

2002-01-01

Full text: The Java Advanced Medical Image Toolkit (jAMIT) has been developed at the Center for PET and Department of Nuclear Medicine in an effort to provide a suite of tools that can be utilised in applications required to perform analysis, processing and visualisation of medical images. jAMIT uses Java Advanced Imaging (JAI) to combine the platform independent nature of Java with the speed benefits associated with native code. The object-orientated nature of Java allows the production of an extensible and robust package which is easily maintained. In addition to jAMIT, a Medical Image VO API called Sushi has been developed to provide access to many commonly used image formats. These include DICOM, Analyze, MINC/NetCDF, Trionix, Beat 6.4, Interfile 3.2/3.3 and Odyssey. This allows jAMIT to access data and study information contained in different medical image formats transparently. Additional formats can be added at any time without any modification to the jAMIT package. Tools available in jAMIT include 2D ROI Analysis, Palette Thresholding, Image Groping, Image Transposition, Scaling, Maximum Intensity Projection, Image Fusion, Image Annotation and Format Conversion. Future tools may include 2D Linear and Non-linear Registration, PET SUV Calculation, 3D Rendering and 3D ROI Analysis. Applications currently using JAMIT include Antibody Dosimetry Analysis, Mean Hemispheric Blood Flow Analysis, QuickViewing of PET Studies for Clinical Training, Pharamcodynamic Modelling based on Planar Imaging, and Medical Image Format Conversion. The use of jAMIT and Sushi for scripting and analysis in Matlab v6.1 and Jython is currently being explored. Copyright (2002) The Australian and New Zealand Society of Nuclear Medicine Inc

Extraction of essential oil from baby Java orange (Citrus sinensis) solid waste using water and steam distillation

Science.gov (United States)

Dewi, I. A.; Prastyo, A. M.; Wijana, S.

2018-03-01

Baby java orange (Citrus sinensis) is commonly consumed as juice. Processing of baby java orange leaves organic waste which consist of the mesocarp, exocarp, seed, and wall of the orange. Therefore, it is necessary to process baby java orange waste to be valuable products. The purpose of this study was to provide added value to unutilized baby java orange waste, and to find out the pretreatment of time-delay process that maximize the yield of essential oil produced. Essential oil processing can be done by water and steam distillation. The study used randomized block design with one factor namely distillation time-delay process by air drying consisted of 4 levels i.e. the distillation delay for 2, 4, 6, and 8 days. The best treatment was determined based on the yield. The best essential oil from baby java orange waste was obtained from the treatment of distillation delay-process of 8 days. This pretreatment generated yield value of 0.63% with moisture content of 24.21%. By estimating the price of essential oil showed that this effort not only reduced the bulky organic waste but also provided potential economical value.

JSME: a free molecule editor in JavaScript.

Science.gov (United States)

Bienfait, Bruno; Ertl, Peter

2013-01-01

A molecule editor, i.e. a program facilitating graphical input and interactive editing of molecules, is an indispensable part of every cheminformatics or molecular processing system. Today, when a web browser has become the universal scientific user interface, a tool to edit molecules directly within the web browser is essential. One of the most popular tools for molecular structure input on the web is the JME applet. Since its release nearly 15 years ago, however the web environment has changed and Java applets are facing increasing implementation hurdles due to their maintenance and support requirements, as well as security issues. This prompted us to update the JME editor and port it to a modern Internet programming language - JavaScript. The actual molecule editing Java code of the JME editor was translated into JavaScript with help of the Google Web Toolkit compiler and a custom library that emulates a subset of the GUI features of the Java runtime environment. In this process, the editor was enhanced by additional functionalities including a substituent menu, copy/paste, drag and drop and undo/redo capabilities and an integrated help. In addition to desktop computers, the editor supports molecule editing on touch devices, including iPhone, iPad and Android phones and tablets. In analogy to JME the new editor is named JSME. This new molecule editor is compact, easy to use and easy to incorporate into web pages. A free molecule editor written in JavaScript was developed and is released under the terms of permissive BSD license. The editor is compatible with JME, has practically the same user interface as well as the web application programming interface. The JSME editor is available for download from the project web page http://peter-ertl.com/jsme/

Dynamic Learning Objects to Teach Java Programming Language

Science.gov (United States)

Narasimhamurthy, Uma; Al Shawkani, Khuloud

2010-01-01

This article describes a model for teaching Java Programming Language through Dynamic Learning Objects. The design of the learning objects was based on effective learning design principles to help students learn the complex topic of Java Programming. Visualization was also used to facilitate the learning of the concepts. (Contains 1 figure and 2…

Estimating radiological consequences using the Java programming language

International Nuclear Information System (INIS)

Crawford, J.; Hayward, M.; Harris, F.; Domel, R.

1998-01-01

At the Australian Nuclear Science and Technology Organisation (ANSTO) a model is being developed to determine critical parameters affecting radioactive doses to humans following a release of radionuclides into the atmosphere. Java programming language was chosen because of the Graphical User Interface (GUI) capabilities and its portability across computer platforms, which were a requirement for the application, called RadCon. The mathematical models are applied over the 2D region, performing time varying calculations of dose to humans for each grid point, according to user selected options. The information combined includes: two dimensional time varying air and ground concentrations, transfer factors from soil to plant, plant to animal, plant to humans, plant interception factors to determine amount of radionuclide on plant surfaces, dosimetric data, such as dose conversion factors and user defined parameters, e.g. soil types, lifestyle, diet of animals and humans. Details of the software requirements, pathway parameters and implementation of RadCon are given

Estimating radiological consequences using the Java programming language

Energy Technology Data Exchange (ETDEWEB)

Crawford, J.; Hayward, M. [Australian Nuclear Science and Technology Organisation (ANSTO), Lucas Heights, NSW (Australia). Information Management Div; Harris, F.; Domel, R. [Australian Nuclear Science and Technology Organisation (ANSTO), Lucas Heights, NSW (Australia). Safety Div.

1998-12-31

At the Australian Nuclear Science and Technology Organisation (ANSTO) a model is being developed to determine critical parameters affecting radioactive doses to humans following a release of radionuclides into the atmosphere. Java programming language was chosen because of the Graphical User Interface (GUI) capabilities and its portability across computer platforms, which were a requirement for the application, called RadCon. The mathematical models are applied over the 2D region, performing time varying calculations of dose to humans for each grid point, according to user selected options. The information combined includes: two dimensional time varying air and ground concentrations, transfer factors from soil to plant, plant to animal, plant to humans, plant interception factors to determine amount of radionuclide on plant surfaces, dosimetric data, such as dose conversion factors and user defined parameters, e.g. soil types, lifestyle, diet of animals and humans. Details of the software requirements, pathway parameters and implementation of RadCon are given 10 refs., 2 tabs., 4 figs.

Pengembangan Aplikasi Sistem Informasi Geografis (SIG berbasis Web untuk Manajemen Pemanfaatan Air Tanah menggunakan PHP, Java dan MySQL Spatial (Studi Kasus di Kabupaten Banyumas

Directory of Open Access Journals (Sweden)

J Jumadi

2009-12-01

Full Text Available In the existing world of geographic information systems (GIS, desktop mapping has taken a critical role for managing and using spatial information for business. But desktop-based GIS application having any limitation for users. The research was conducted to develop the web-based GIS in order to manage groundwater exploration and production, preventing from uncontrolled exploration, using Java Applet, MySQL Spatial and PHP. The system development was designed by using waterfall model of system life cycle with following steps: 1 system requirements, 2 software requirements, 3 analysis, 4 program design, 5 coding, 6 testing, and 7 operation, supported by reference study, observation, and peer discussion. The result shows that by using Java Applet, MySQL Spatial and PHP, web-based GIS for groundwater management is customizable to create spatial modeling and well log modeling, user friendly, interactive, interoperable, informative, and easy to access with LAN/WAN connected PC. The application is very helpful in order to balance between groundwater supply and production, groundwater level monitoring, water quality monitoring, and groundwater user monitoring. Hopefully, the implementation of the system will help the groundwater supply conservation for sustainable development.

Monitoring and reporting software for the coal industry

Energy Technology Data Exchange (ETDEWEB)

Okanovic, M. [Advanced Systems Integration Pty Ltd. (Australia)

2001-08-01

This paper explains the development and launch of MineSuite software, designed to facilitate report production in coal mines. Advanced Systems Integration (ASI) has developed a system that is generic to all mining operations. Mine personnel can define all processes, KPIs, equipment, delays, reports etc. that are vital in monitoring mining operations. Its capabilities have been realised in opencut, underground and preparation plants throughout Australia. Written in Java, MineSuite is a multi-user, multi-threaded, multi-tasking distributed application. 3 figs.

Módulo Empresarial para la Validación Formal de Ejercicios aplicado a la Programación Concurrente en Java

Directory of Open Access Journals (Sweden)

P. Basanta-Val

2012-07-01

Full Text Available Resumen: La utilización de herramientas que permitan detectar problemas de programación es de utilidad tanto para el docente, el cual puede probar de una forma más exhaustiva las prácticas entregadas, como para el discente, el cual puede utilizar dichas herramientas. En muchos casos, existen herramientas previas utilizadas en el desarrollo software, que pueden ser adaptadas para ser utilizadas en un entorno formativo. Este trabajo aporta la integración de una herramienta de validación formal de sistemas concurrentes Java, la cual garantiza la no existencia de defectos como son el abrazo mortal y las condiciones de carrera, en un entorno Web abierto. Más concretamente, la herramienta que se ha escogido es denominada JPF (Java Path Finder y se la ha dotado de interfaces dentro de un servidor Java EE (Enterprise Edition, lo que facilita la utilización de servicios propios de la plataforma Java EE y la interoperabilidad entre estos con el módulo diseñado. El artículo trata aspectos tecnológicos derivados de dicha integración como son el diseño de una arquitectura que da soporte a la validación vía web. También detalla una serie de experimentos relativos al rendimiento de la plataforma realizados sobre un curso real, lo que permite medir costes computacionales y su utilidad en la evaluación Abstract: Tools that allow detecting programming faults are useful for both docents, who may test submitted exercises, and students, who may use these tools in advance. In this article the authors develop one tool for detecting failures in applications. In many cases there are previous tools that may be readapted to be used in an educational scope. This article integrates of one of these tools, which avoids code with dead-locks and race-conditions, into the Internet. The tool integrated is JPF (Java Path Finder and it is accessed from a Java EE web frontend which carries out the exercise assessment. The article deals with the definition of the

SVM Classifier - a comprehensive java interface for support vector machine classification of microarray data.

Science.gov (United States)

Pirooznia, Mehdi; Deng, Youping

2006-12-12

Graphical user interface (GUI) software promotes novelty by allowing users to extend the functionality. SVM Classifier is a cross-platform graphical application that handles very large datasets well. The purpose of this study is to create a GUI application that allows SVM users to perform SVM training, classification and prediction. The GUI provides user-friendly access to state-of-the-art SVM methods embodied in the LIBSVM implementation of Support Vector Machine. We implemented the java interface using standard swing libraries. We used a sample data from a breast cancer study for testing classification accuracy. We achieved 100% accuracy in classification among the BRCA1-BRCA2 samples with RBF kernel of SVM. We have developed a java GUI application that allows SVM users to perform SVM training, classification and prediction. We have demonstrated that support vector machines can accurately classify genes into functional categories based upon expression data from DNA microarray hybridization experiments. Among the different kernel functions that we examined, the SVM that uses a radial basis kernel function provides the best performance. The SVM Classifier is available at http://mfgn.usm.edu/ebl/svm/.

CGNS Mid-Level Software Library and Users Guide

Science.gov (United States)

Poirier, Diane; Smith, Charles A. (Technical Monitor)

1998-01-01

The "CFD General Notation System" (CGNS) consists of a collection of conventions, and conforming software, for the storage and retrieval of Computational Fluid Dynamics (CFD) data. It facilitates the exchange of data between sites and applications, and helps stabilize the archiving of aerodynamic data. This effort was initiated in order to streamline the procedures in exchanging data and software between NASA and its customers, but the goal is to develop CGNS into a National Standard for the exchange of aerodynamic data. The CGNS development team is comprised of members from Boeing Commercial Airplane Group, NASA-Ames, NASA-Langley, NASA-Lewis, McDonnell-Douglas Corporation (now Boeing-St. Louis), Air Force-Wright Lab., and ICEM-CFD Engineering. The elements of CGNS address all activities associated with the storage of data on external media and its movement to and from application programs. These elements include: - The Advanced Data Format (ADF) Database manager, consisting of both a file format specification and its I/O software, which handles the actual reading and writing of data from and to external storage media; - The Standard Interface Data Structures (SIDS), which specify the intellectual content of CFD data and the conventions governing naming and terminology; - The SIDS-to-ADF File Mapping conventions, which specify the exact location where the CFD data defined by the SIDS is to be stored within the ADF file(s); and - The CGNS Mid-level Library, which provides CFD-knowledgeable routines suitable for direct installation into application codes. The CGNS Mid-level Library was designed to ease the implementation of CGNS by providing developers with a collection of handy I/O functions. Since knowledge of the ADF core is not required to use this library, it will greatly facilitate the task of interfacing with CGNS. There are currently 48 user callable functions that comprise the Mid-level library and are described in the Users Guide. The library is written in

SBSI: an extensible distributed software infrastructure for parameter estimation in systems biology.

Science.gov (United States)

Adams, Richard; Clark, Allan; Yamaguchi, Azusa; Hanlon, Neil; Tsorman, Nikos; Ali, Shakir; Lebedeva, Galina; Goltsov, Alexey; Sorokin, Anatoly; Akman, Ozgur E; Troein, Carl; Millar, Andrew J; Goryanin, Igor; Gilmore, Stephen

2013-03-01

Complex computational experiments in Systems Biology, such as fitting model parameters to experimental data, can be challenging to perform. Not only do they frequently require a high level of computational power, but the software needed to run the experiment needs to be usable by scientists with varying levels of computational expertise, and modellers need to be able to obtain up-to-date experimental data resources easily. We have developed a software suite, the Systems Biology Software Infrastructure (SBSI), to facilitate the parameter-fitting process. SBSI is a modular software suite composed of three major components: SBSINumerics, a high-performance library containing parallelized algorithms for performing parameter fitting; SBSIDispatcher, a middleware application to track experiments and submit jobs to back-end servers; and SBSIVisual, an extensible client application used to configure optimization experiments and view results. Furthermore, we have created a plugin infrastructure to enable project-specific modules to be easily installed. Plugin developers can take advantage of the existing user-interface and application framework to customize SBSI for their own uses, facilitated by SBSI's use of standard data formats. All SBSI binaries and source-code are freely available from http://sourceforge.net/projects/sbsi under an Apache 2 open-source license. The server-side SBSINumerics runs on any Unix-based operating system; both SBSIVisual and SBSIDispatcher are written in Java and are platform independent, allowing use on Windows, Linux and Mac OS X. The SBSI project website at http://www.sbsi.ed.ac.uk provides documentation and tutorials.

Java Test Driver Generation from Object-Oriented Interaction Traces

NARCIS (Netherlands)

M.M. Bonsangue (Marcello); F.S. de Boer (Frank); A. Gruener; M. Steffen

2009-01-01

htmlabstractIn the context of test-driven development for object-oriented programs, mock objects are increasingly used for unit testing. Several Java mock object frameworks exist, which all have in common that mock objects, realizing the test environment, are directly specied at the Java program

The concept of geothermal exploration in west Java based on geophysical data

Science.gov (United States)

Gaffar, Eddy Z.

2018-02-01

Indonesia has the largest geothermal prospects in the world and most of them are concentrated in Java and Sumatera. The ones on Sumatra island are generally controlled by Sumatra Fault, either the main fault or the second and the third order fault. Geothermal in Java is still influenced by the subduction of oceanic plates from the south of Java island that forms the southern mountains extending from West Java to East Java. From a geophysical point of view, there is still no clue or concept that accelerates the process of geothermal exploration. The concept is that geothermal is located around the volcano (referred to the volcano as a host) and around the fault (fault as a host). There is another method from remote sensing analysis that often shows circular feature. In a study conducted by LIPI, we proposed a new concept for geothermal exploration which is from gravity analysis using Bouguer anomaly data from Java Island, which also show circular feature. The feature is supposed to be an "ancient crater" or a hidden caldera. Therefore, with this hypothesis, LIPI Geophysics team will try to prove whether this symptom can help accelerate the process of geothermal exploration on the island of West Java. Geophysical methods might simplify the exploration of geothermal prospect in West Java. Around the small circular feature, there are some large geothermal prospect areas such as Guntur, Kamojang, Drajat, Papandayan, Karaha Bodas, Patuha. The concept proposed by our team will try be applied to explore geothermal in Java Island for future work.

High-performance file I/O in Java : existing approaches and bulk I/O extensions.

Energy Technology Data Exchange (ETDEWEB)

Bonachea, D.; Dickens, P.; Thakur, R.; Mathematics and Computer Science; Univ. of California at Berkeley; Illinois Institute of Technology

2001-07-01

There is a growing interest in using Java as the language for developing high-performance computing applications. To be successful in the high-performance computing domain, however, Java must not only be able to provide high computational performance, but also high-performance I/O. In this paper, we first examine several approaches that attempt to provide high-performance I/O in Java - many of which are not obvious at first glance - and evaluate their performance on two parallel machines, the IBM SP and the SGI Origin2000. We then propose extensions to the Java I/O library that address the deficiencies in the Java I/O API and improve performance dramatically. The extensions add bulk (array) I/O operations to Java, thereby removing much of the overhead currently associated with array I/O in Java. We have implemented the extensions in two ways: in a standard JVM using the Java Native Interface (JNI) and in a high-performance parallel dialect of Java called Titanium. We describe the two implementations and present performance results that demonstrate the benefits of the proposed extensions.

The State of Software for Evolutionary Biology.

Science.gov (United States)

Darriba, Diego; Flouri, Tomáš; Stamatakis, Alexandros

2018-05-01

With Next Generation Sequencing data being routinely used, evolutionary biology is transforming into a computational science. Thus, researchers have to rely on a growing number of increasingly complex software. All widely used core tools in the field have grown considerably, in terms of the number of features as well as lines of code and consequently, also with respect to software complexity. A topic that has received little attention is the software engineering quality of widely used core analysis tools. Software developers appear to rarely assess the quality of their code, and this can have potential negative consequences for end-users. To this end, we assessed the code quality of 16 highly cited and compute-intensive tools mainly written in C/C++ (e.g., MrBayes, MAFFT, SweepFinder, etc.) and JAVA (BEAST) from the broader area of evolutionary biology that are being routinely used in current data analysis pipelines. Because, the software engineering quality of the tools we analyzed is rather unsatisfying, we provide a list of best practices for improving the quality of existing tools and list techniques that can be deployed for developing reliable, high quality scientific software from scratch. Finally, we also discuss journal as well as science policy and, more importantly, funding issues that need to be addressed for improving software engineering quality as well as ensuring support for developing new and maintaining existing software. Our intention is to raise the awareness of the community regarding software engineering quality issues and to emphasize the substantial lack of funding for scientific software development.

Adding Wildcards to the Java Programming Language

DEFF Research Database (Denmark)

Torgersen, Mads; Hansen, Christian Plesner; Ernst, Erik

2004-01-01

, by using ‘?’ to denote unspecified type arguments. Thus they essentially unify the distinct families of classes that parametric polymorphism introduces. Wildcards are implemented as part of the addition of generics to the JavaTM programming language, and is thus deployed world-wide as part...... of the reference implementation of the Java compiler javac available from Sun Microsystems, Inc. By providing a richer type system, wildcards allow for an improved type inference scheme for polymorphic method calls. Moreover, by means of a novel notion of wildcard capture, polymorphic methods can be used to give...... symbolic names to unspecified types, in a manner similar to the “open� construct known from existential types. Wildcards show up in numerous places in the Java Platform APIs of the newest release, and some of the examples in this paper are taken from these APIs....