Antibody-Based Detection of ERG Rearrangement-Positive Prostate Cancer

Directory of Open Access Journals (Sweden)

Kyung Park

2010-07-01

Full Text Available TMPRSS2-ERG gene fusions occur in 50% of prostate cancers and result in the overexpression of a chimeric fusion transcript that encodes a truncated ERG product. Previous attempts to detect truncated ERG products have been hindered by a lack of specific antibodies. Here, we characterize a rabbit anti-ERG monoclonal antibody (clone EPR 3864; Epitomics, Burlingame, CA using immunoblot analysis on prostate cancer cell lines, synthetic TMPRSS2-ERG constructs, chromatin immunoprecipitation, and immunofluorescence. We correlated ERG protein expression with the presence of ERG gene rearrangements in prostate cancertissues using a combined immunohistochemistry(IHC and fluorescence in situ hybridization (FISH analysis. We independently evaluated two patient cohorts and observed ERG expression confined to prostate cancer cells and high-grade prostatic intraepithelial reoplasia associated with ERG-positive cancer, as well as vessels and lymphocytes (where ERG has a known biologic role. Image analysis of 131 cases demonstrated nearly 100% sensitivity for detecting ERG rearrangement prostate cancer, with only 2 (1.5% of 131 cases demonstrating strong ERG protein expression without any known ERG gene fusion. The combired pathology evaluation of 207 patient tumors for ERG protein expression had 95.7% sensitivity and 96.5% specificity for determining ERG rearrangement prostate cancer. Ir conclusion, this study qualifies a specific anti-ERG antibody and demonstrates exquisite association between ERG gene rearrangement and truncated ERG protein product expression. Giver the ease of performing IHC versus FISH, ERG protein expression may be useful for molecularly subtypirg prostate cancer based or ERG rearrangement status and suggests clinical utility it prostate needle biopsy evaluation.

ERG review of waste package corrosion mechanisms

International Nuclear Information System (INIS)

Geisert, R.E.

1988-01-01

The Engineering Review Group (ERG) was established by the Office of Nuclear Waste Isolation (ONWI) to help evaluate engineering-related issues in the US Department of Energy's nuclear waste repository program. The ERG reviewed the waste package corrosion mechanisms. This report documents the ERG's comments and recommendations on these subjects and the ONWI response to the specific points raised by the ERG. 1 ref

Expression of ERG Protein and TMRPSS2-ERG Fusion in Prostatic Carcinoma in Egyptian Patients

Directory of Open Access Journals (Sweden)

Ahmed Abdel-Hady

2017-03-01

CONCLUSION: Our findings emphasise that only malignant and pre-malignant cells and not benign cells from the prostate stain positive. ERG expression may offer a simpler, accurate and less costly alternative for evaluation of ERG fusion status in PCa.

Dune-slope activity due to frost and wind throughout the north polar erg, Mars.

Science.gov (United States)

Diniega, Serina; Hansen, Candice J; Allen, Amanda; Grigsby, Nathan; Li, Zheyu; Perez, Tyler; Chojnacki, Matthew

2017-01-01

Repeat, high-resolution imaging of dunes within the Martian north polar erg have shown that these dune slopes are very active, with alcoves forming along the dune brink each Mars year. In some areas, a few hundred cubic metres of downslope sand movement have been observed, sometimes moving the dune brink 'backwards'. Based on morphological and activity-timing similarities of these north polar features to southern dune gullies, identifying the processes forming these features is likely to have relevance for understanding the general evolution/modification of dune gullies. To determine alcove-formation model constraints, we have surveyed seven dune fields, each over 1-4 Mars winters. Consistent with earlier reports, we found that alcove-formation activity occurs during the autumn-winter seasons, before or while the stable seasonal frost layer is deposited. We propose a new model in which alcove formation occurs during the autumn, and springtime sublimation activity then enhances the feature. Summertime winds blow sand into the new alcoves, erasing small alcoves over a few Mars years. Based on the observed rate of alcove erasure, we estimated the effective aeolian sand transport flux. From this, we proposed that alcove formation may account for 2-20% of the total sand movement within these dune fields.

Escitalopram block of hERG potassium channels.

Science.gov (United States)

Chae, Yun Ju; Jeon, Ji Hyun; Lee, Hong Joon; Kim, In-Beom; Choi, Jin-Sung; Sung, Ki-Wug; Hahn, Sang June

2014-01-01

Escitalopram, a selective serotonin reuptake inhibitor, is the pharmacologically active S-enantiomer of the racemic mixture of RS-citalopram and is widely used in the treatment of depression. The effects of escitalopram and citalopram on the human ether-a-go-go-related gene (hERG) channels expressed in human embryonic kidney cells were investigated using voltage-clamp and Western blot analyses. Both drugs blocked hERG currents in a concentration-dependent manner with an IC50 value of 2.6 μM for escitalopram and an IC50 value of 3.2 μM for citalopram. The blocking of hERG by escitalopram was voltage-dependent, with a steep increase across the voltage range of channel activation. However, voltage independence was observed over the full range of activation. The blocking by escitalopram was frequency dependent. A rapid application of escitalopram induced a rapid and reversible blocking of the tail current of hERG. The extent of the blocking by escitalopram during the depolarizing pulse was less than that during the repolarizing pulse, suggesting that escitalopram has a high affinity for the open state of the hERG channel, with a relatively lower affinity for the inactivated state. Both escitalopram and citalopram produced a reduction of hERG channel protein trafficking to the plasma membrane but did not affect the short-term internalization of the hERG channel. These results suggest that escitalopram blocked hERG currents at a supratherapeutic concentration and that it did so by preferentially binding to both the open and the inactivated states of the channels and by inhibiting the trafficking of hERG channel protein to the plasma membrane.

Indexing molecules for their hERG liability.

Science.gov (United States)

Rayan, Anwar; Falah, Mizied; Raiyn, Jamal; Da'adoosh, Beny; Kadan, Sleman; Zaid, Hilal; Goldblum, Amiram

2013-07-01

The human Ether-a-go-go-Related-Gene (hERG) potassium (K(+)) channel is liable to drug-inducing blockage that prolongs the QT interval of the cardiac action potential, triggers arrhythmia and possibly causes sudden cardiac death. Early prediction of drug liability to hERG K(+) channel is therefore highly important and preferably obligatory at earlier stages of any drug discovery process. In vitro assessment of drug binding affinity to hERG K(+) channel involves substantial expenses, time, and labor; and therefore computational models for predicting liabilities of drug candidates for hERG toxicity is of much importance. In the present study, we apply the Iterative Stochastic Elimination (ISE) algorithm to construct a large number of rule-based models (filters) and exploit their combination for developing the concept of hERG Toxicity Index (ETI). ETI estimates the molecular risk to be a blocker of hERG potassium channel. The area under the curve (AUC) of the attained model is 0.94. The averaged ETI of hERG binders, drugs from CMC, clinical-MDDR, endogenous molecules, ACD and ZINC, were found to be 9.17, 2.53, 3.3, -1.98, -2.49 and -3.86 respectively. Applying the proposed hERG Toxicity Index Model on external test set composed of more than 1300 hERG blockers picked from chEMBL shows excellent performance (Matthews Correlation Coefficient of 0.89). The proposed strategy could be implemented for the evaluation of chemicals in the hit/lead optimization stages of the drug discovery process, improve the selection of drug candidates as well as the development of safe pharmaceutical products. Copyright © 2013 Elsevier Masson SAS. All rights reserved.

Mechanisms underlying probucol-induced hERG-channel deficiency

Directory of Open Access Journals (Sweden)

Shi YQ

2015-07-01

Full Text Available Yuan-Qi Shi,1,* Cai-Chuan Yan,1,* Xiao Zhang,1 Meng Yan,1 Li-Rong Liu,1 Huai-Ze Geng,1 Lin Lv,1 Bao-Xin Li1,21Department of Pharmacology, Harbin Medical University, 2State-Province Key Laboratory of Biopharmaceutical Engineering, Harbin, Heilongjiang, People’s Republic of China*These authors contributed equally to this workAbstract: The hERG gene encodes the pore-forming α-subunit of the rapidly activating delayed rectifier potassium channel (IKr, which is important for cardiac repolarization. Reduction of IhERG due to genetic mutations or drug interferences causes long QT syndrome, leading to life-threatening cardiac arrhythmias (torsades de pointes or sudden death. Probucol is a cholesterol-lowering drug that could reduce hERG current by decreasing plasma membrane hERG protein expression and eventually cause long QT syndrome. Here, we investigated the mechanisms of probucol effects on IhERG and hERG-channel expression. Our data demonstrated that probucol reduces SGK1 expression, known as SGK isoform, in a concentration-dependent manner, resulting in downregulation of phosphorylated E3 ubiquitin ligase Nedd4-2 expression, but not the total level of Nedd4-2. As a result, the hERG protein reduces, due to the enhanced ubiquitination level. On the contrary, carbachol could enhance the phosphorylation level of Nedd4-2 as an alternative to SGK1, and thus rescue the ubiquitin-mediated degradation of hERG channels caused by probucol. These discoveries provide a novel mechanism of probucol-induced hERG-channel deficiency, and imply that carbachol or its analog may serve as potential therapeutic compounds for the handling of probucol cardiotoxicity.Keywords: long QT, hERG potassium channels, probucol, SGK1, Nedd4-2

ERG oncoprotein expression in prostate carcinoma patients of different ethnicities.

Science.gov (United States)

Kelly, Gregory M; Kong, Yink Heay; Dobi, Albert; Srivastava, Shiv; Sesterhenn, Isabell A; Pathmanathan, Rajadurai; Tan, Hui Meng; Tan, Shyh-Han; Cheong, Sok Ching

2015-01-01

Overexpression of the erythroblast transformation-specific-related gene (ERG) oncoprotein due to transmembrane protease, serine 2 ( TMPRSS2 ) -ERG fusion, the most prevalent genomic alteration in prostate cancer (CaP), is more frequently observed among Caucasian patients compared to patients of African or Asian descent. To the best of our knowledge, this is the first study to investigate the prevalence of ERG alterations in a multiethnic cohort of CaP patients. A total of 191 formalin-fixed paraffin-embedded sections of transrectal ultrasound-guided prostate biopsy specimens, collected from 120 patients treated at the Sime Darby Medical Centre, Subang Jaya, Malaysia, were analyzed for ERG protein expression by immunohistochemistry using the anti-ERG monoclonal antibody 9FY as a surrogate for the detection of ERG fusion events. The overall frequency of ERG protein expression in the population evaluated in this study was 39.2%. Although seemingly similar to rates reported in other Asian communities, the expression of ERG was distinct amongst different ethnic groups (P=0.004). Malaysian Indian (MI) patients exhibited exceedingly high expression of ERG in their tumors, almost doubling that of Malaysian Chinese (MC) patients, whereas ERG expression was very low amongst Malay patients (12.5%). When collectively analyzing data, we observed a significant correlation between younger patients and higher ERG expression (P=0.04). The prevalence of ERG expression was significantly different amongst CaP patients of different ethnicities. The higher number of ERG-expressing tumors among MI patients suggested that the TMPRSS2-ERG fusion may be particularly important in the pathogenesis of CaP amongst this group of patients. Furthermore, the more frequent expression of ERG among the younger patients analyzed suggested an involvement of ERG in the early onset of CaP. The results of this study underline the value of using ERG status to better understand the differences in the

Modulation of ERG channels by XE991

DEFF Research Database (Denmark)

Elmedyb, Pernille; Calloe, Kirstine; Schmitt, Nicole

2007-01-01

In neuronal tissue, KCNQ2-5 channels conduct the physiologically important M-current. In some neurones, the M-current may in addition be conducted partly by ERG potassium channels, which have widely overlapping expression with the KCNQ channel subunits. XE991 and linopiridine are known to be stan......In neuronal tissue, KCNQ2-5 channels conduct the physiologically important M-current. In some neurones, the M-current may in addition be conducted partly by ERG potassium channels, which have widely overlapping expression with the KCNQ channel subunits. XE991 and linopiridine are known...... to be standard KCNQ potassium channel blockers. These compounds have been used in many different tissues as specific pharmacological tools to discern native currents conducted by KCNQ channels from other potassium currents. In this article, we demonstrate that ERG1-2 channels are also reversibly inhibited by XE......991 in the micromolar range (EC(50) 107 microM for ERG1). The effect has been characterized in Xenopus laevis oocytes expressing ERG1-2 and in the mammalian HEK293 cell line stably expressing ERG1 channels. The IC(50) values for block of KCNQ channels by XE991 range 1-65 microM. In conclusion, great...

Current State of ERG as Biomarker in Prostatic Adenocarcinoma.

Science.gov (United States)

Acs, Balazs; Szarvas, Tibor; Szekely, Nora; Nyirady, Peter; Szasz, A Marcell

2015-01-01

In this review we briefly discuss the possible biomarkers of prostate cancer among them we focus and analyze the relevance of TMPRSS2-ERG fusion gene in line with ERG expression in the diagnosis of prostate cancer. Starting at diagnosis and genetic alterations in prostate carcinomas, we examine the incidence and detection of the most common genetic aberration in this tumor and its protein product as well. We also examined the correlation of clinicopathological factors and prognosis with ERG and the TMPRSS2-ERG fusion oncogene and ERG expression as predictive markers.

The Jurassic of Denmark and Greenland: The Upper Jurassic of Europe: its subdivision and correlation

Directory of Open Access Journals (Sweden)

Zeiss, Arnold

2003-10-01

Full Text Available In the last 40 years, the stratigraphy of the Upper Jurassic of Europe has received much attention and considerable revision; much of the impetus behind this endeavour has stemmed from the work of the International Subcommission on Jurassic Stratigraphy. The Upper Jurassic Series consists of three stages, the Oxfordian, Kimmeridgian and Tithonian which are further subdivided into substages, zones and subzones, primarily on the basis of ammonites. Regional variations between the Mediterranean, Submediterranean and Subboreal provinces are discussed and correlation possibilities indicated. The durations of the Oxfordian, Kimmeridgian and Tithonian Stages are reported to have been 5.3, 3.4 and 6.5 Ma, respectively. This review of the present status of Upper Jurassic stratigraphy aids identification of a number of problems of subdivision and definition of Upper Jurassic stages; in particular these include correlation of the base of the Kimmeridgian and the top of the Tithonian between Submediterranean and Subboreal Europe. Although still primarily based on ammonite stratigraphy, subdivision of the Upper Jurassic is increasingly being refined by the incorporation of other fossil groups; these include both megafossils, such as aptychi, belemnites, bivalves, gastropods, brachiopods, echinoderms, corals, sponges and vertebrates, and microfossils such as foraminifera, radiolaria, ciliata, ostracodes, dinoflagellates, calcareous nannofossils, charophyaceae, dasycladaceae, spores and pollen. Important future developments will depend on the detailed integration of these disparate biostratigraphic data and their precise combination with the abundant new data from sequence stratigraphy, utilising the high degree of stratigraphic resolution offered by certain groups of fossils. This article also contains some notes on the recent results of magnetostratigraphy and sequence chronostratigraphy.

Deletion of the Candida glabrata ERG3 and ERG11 genes: effect on cell viability, cell growth, sterol composition, and antifungal susceptibility.

Science.gov (United States)

Geber, A; Hitchcock, C A; Swartz, J E; Pullen, F S; Marsden, K E; Kwon-Chung, K J; Bennett, J E

1995-01-01

We have cloned and sequenced the structural genes encoding the delta 5,6 sterol desaturase (ERG3 gene) and the 14 alpha-methyl sterol demethylase (ERG11 gene) from Candida glabrata L5 (leu2). Single and double mutants of these genes were created by gene deletion. The phenotypes of these mutants, including sterol profiles, aerobic viabilities, antifungal susceptibilities, and generation times, were studied. Strain L5D (erg3 delta::LEU2) accumulated mainly ergosta-7,22-dien-3 beta-ol, was aerobically viable, and remained susceptible to antifungal agents but had a slower generation time than its parent strain. L5LUD (LEU2 erg11 delta::URA3) strains required medium supplemented with ergosterol and an anaerobic environment for growth. A spontaneous aerobically viable mutant, L5LUD40R (LEU erg11 delta::URA3), obtained from L5LUD (LEU2 erg11 delta::URA3), was found to accumulate lanosterol and obtusifoliol, was resistant to azole antifungal agents, demonstrated some increase in resistance to amphotericin B, and exhibited a 1.86-fold increase in generation time in comparison with L5 (leu2). The double-deletion mutant L5DUD61 (erg3 delta::LEU2 erg11 delta::URA3) was aerobically viable, produced mainly 14 alpha-methyl fecosterol, and had the same antifungal susceptibility pattern as L5LUD40R (LEU2 erg11 delta::URA3), and its generation time was threefold greater than that of L5 (leu2). Northern (RNA) analysis revealed that the single-deletion mutants had a marked increase in message for the undeleted ERG3 and ERG11 genes. These results indicate that differences in antifungal susceptibilities and the restoration of aerobic viability exist between the C. glabrata ergosterol mutants created in this study and those sterol mutants with similar genetic lesions previously reported for Saccharomyces cerevisiae. PMID:8593007

Reduced Erg Dosage Impairs Survival of Hematopoietic Stem and Progenitor Cells.

Science.gov (United States)

Xie, Ying; Koch, Mia Lee; Zhang, Xin; Hamblen, Melanie J; Godinho, Frank J; Fujiwara, Yuko; Xie, Huafeng; Klusmann, Jan-Henning; Orkin, Stuart H; Li, Zhe

2017-07-01

ERG, an ETS family transcription factor frequently overexpressed in human leukemia, has been implicated as a key regulator of hematopoietic stem cells. However, how ERG controls normal hematopoiesis, particularly at the stem and progenitor cell level, and how it contributes to leukemogenesis remain incompletely understood. Using homologous recombination, we generated an Erg knockdown allele (Erg kd ) in which Erg expression can be conditionally restored by Cre recombinase. Erg kd/kd animals die at E10.5-E11.5 due to defects in endothelial and hematopoietic cells, but can be completely rescued by Tie2-Cre-mediated restoration of Erg in these cells. In Erg kd/+ mice, ∼40% reduction in Erg dosage perturbs both fetal liver and bone marrow hematopoiesis by reducing the numbers of Lin - Sca-1 + c-Kit + (LSK) hematopoietic stem and progenitor cells (HSPCs) and megakaryocytic progenitors. By genetic mosaic analysis, we find that Erg-restored HSPCs outcompete Erg kd/+ HSPCs for contribution to adult hematopoiesis in vivo. This defect is in part due to increased apoptosis of HSPCs with reduced Erg dosage, a phenotype that becomes more drastic during 5-FU-induced stress hematopoiesis. Expression analysis reveals that reduced Erg expression leads to changes in expression of a subset of ERG target genes involved in regulating survival of HSPCs, including increased expression of a pro-apoptotic regulator Bcl2l11 (Bim) and reduced expression of Jun. Collectively, our data demonstrate that ERG controls survival of HSPCs, a property that may be used by leukemic cells. Stem Cells 2017;35:1773-1785. © 2017 AlphaMed Press.

Activation of ERG2 potassium channels by the diphenylurea NS1643

DEFF Research Database (Denmark)

Elmedyb, Pernille; Olesen, Søren-Peter; Grunnet, Morten

2007-01-01

Three members of the ERG potassium channel family have been described (ERG1-3 or Kv 11.1-3). ERG1 is by far the best characterized subtype and it constitutes the molecular component of the cardiac I(Kr) current. All three channel subtypes are expressed in neurons but their function remains unclear....... The lack of functional information is at least partly due to the lack of specific pharmacological tools. The compound NS1643 has earlier been reported as an ERG1 channel activator. We found that NS1643 also activates the ERG2 channel; however, the molecular mechanism of the activation differs between...... the ERG1 and ERG2 channels. This is surprising since ERG1 and ERG2 channels have very similar biophysical and structural characteristics. For ERG2, NS1643 causes a left-ward shift of the activation curve, a faster time-constant of activation and a slower time-constant of inactivation as well...

High Glucose Represses hERG K+ Channel Expression through Trafficking Inhibition

Directory of Open Access Journals (Sweden)

Yuan-Qi Shi

2015-08-01

Full Text Available Background/Aims: Abnormal QT prolongation is the most prominent cardiac electrical disturbance in patients with diabetes mellitus (DM. It is well known that the human ether-ago-go-related gene (hERG controls the rapid delayed rectifier K+ current (IKr in cardiac cells. The expression of the hERG channel is severely down-regulated in diabetic hearts, and this down-regulation is a critical contributor to the slowing of repolarization and QT prolongation. However, the intracellular mechanisms underlying the diabetes-induced hERG deficiency remain unknown. Methods: The expression of the hERG channel was assessed via western blot analysis, and the hERG current was detected with a patch-clamp technique. Results: The results of our study revealed that the expression of the hERG protein and the hERG current were substantially decreased in high-glucose-treated hERG-HEK cells. Moreover, we demonstrated that the high-glucose-mediated damage to the hERG channel depended on the down-regulation of protein levels but not the alteration of channel kinetics. These discoveries indicated that high glucose likely disrupted hERG channel trafficking. From the western blot and immunoprecipitation analyses, we found that high glucose induced trafficking inhibition through an effect on the expression of Hsp90 and its interaction with hERG. Furthermore, the high-glucose-induced inhibition of hERG channel trafficking could activate the unfolded protein response (UPR by up-regulating the expression levels of activating transcription factor-6 (ATF-6 and the ER chaperone protein calnexin. In addition, we demonstrated that 100 nM insulin up-regulated the expression of the hERG channel and rescued the hERG channel repression caused by high glucose. Conclusion: The results of our study provide the first evidence of a high-glucose-induced hERG channel deficiency resulting from the inhibition of channel trafficking. Furthermore, insulin promotes the expression of the hERG channel

The multifocal electroretinogram (mfERG) in the pig

DEFF Research Database (Denmark)

Voss Kyhn, Maria; Kiilgaard, Jens Folke; Lopez, Ana Garcia

2007-01-01

To establish a method allowing multifocal electroretinography (mfERG) recording with simultaneous fundus monitoring on anaesthetized pigs. In addition we characterize the peaks of the porcine mfERG trace, and compare the visual streak area with the optic nerve head, a known non-response area....... Finally we illustrate the feasibility of the method by performing mfERG after an induced laser burn in the visual streak....

Paleocurrents of the Middle-Upper Jurassic strata in the Paradox Basin, Colorado, inferred from anisotropy of magnetic susceptibility (AMS)

Science.gov (United States)

Ejembi, J. I.; Ferre, E. C.; Potter-McIntyre, S. L.

2017-12-01

The Middle-Upper Jurassic sedimentary strata in the southwestern Colorado Plateau recorded pervasive eolian to fluvio-lacustrine deposition in the Paradox Basin. While paleocurrents preserved in the Entrada Sandstone, an eolian deposition in the Middle Jurassic, has been well constrained and show a northwesterly to northeasterly migration of ergs from the south onto the Colorado Plateau, there is yet no clear resolution of the paleocurrents preserved in the Wanakah Formation and Tidwell Member of the Morrison Formation, both of which are important sedimentary sequences in the paleogeographic framework of the Colorado Plateau. New U-Pb detrital zircon geochronology of sandstones from these sequences suggests that an abrupt change in provenance occurred in the early Late Jurassic, with sediments largely sourced from eroding highlands in central Colorado. We measured the anisotropy of magnetic susceptibility (AMS) of sediments in oriented sandstone samples from these three successive sequences; first, to determine the paleocurrents from the orientations of the AMS fabrics in order to delineate the source area and sediments dispersal pattern and second, to determine the depositional mechanisms of the sediments. Preliminary AMS data from two study sites show consistency and clustering of the AMS axes in all the sedimentary sequences. The orientations of the Kmin - Kint planes in the Entrada Sandstone sample point to a NNE-NNW paleocurrent directions, which is in agreement with earlier studies. The orientations of the Kmin - Kint planes in the Wanakah Formation and Tidwell Member samples show W-SW trending paleocurrent directions, corroborating our hypothesis of a shift in provenance to the eroding Ancestral Front Range Mountain, located northeast of the Paradox Basin, during the Late Jurassic. Isothermal remanence magnetization (IRM) of the samples indicate that the primary AMS carriers are detrital, syndepositional ferromagnetic minerals. Thus, we contend that AMS can

ERG review of waste package container materials selection and corrosion

International Nuclear Information System (INIS)

Moak, D.P.; Perrin, J.S.

1986-07-01

The Engineering Review Group (ERG) was established by the Office of Nuclear Waste Isolation (ONWI) to help evaluate engineering-related issues in the US Department of Energy's nuclear waste repository program. The October 1984 meeting of the ERG reviewed the waste package container materials selection and corrosion. This report documents the ERG's comments and recommendations on these subjects and the ONWI response to the specific points raised by the ERG

Annual monsoon rains recorded by Jurassic dunes.

Science.gov (United States)

Loope, D B; Rowe, C M; Joeckel, R M

2001-07-05

Pangaea, the largest landmass in the Earth's history, was nearly bisected by the Equator during the late Palaeozoic and early Mesozoic eras. Modelling experiments and stratigraphic studies have suggested that the supercontinent generated a monsoonal atmospheric circulation that led to extreme seasonality, but direct evidence for annual rainfall periodicity has been lacking. In the Mesozoic era, about 190 million years ago, thick deposits of wind-blown sand accumulated in dunes of a vast, low-latitude desert at Pangaea's western margin. These deposits are now situated in the southwestern USA. Here we analyse slump masses in the annual depositional cycles within these deposits, which have been described for some outcrops of the Navajo Sandstone. Twenty-four slumps, which were generated by heavy rainfall, appear within one interval representing 36 years of dune migration. We interpret the positions of 20 of these masses to indicate slumping during summer monsoon rains, with the other four having been the result of winter storms. The slumped lee faces of these Jurassic dunes therefore represent a prehistoric record of yearly rain events.

hERG trafficking inhibition in drug-induced lethal cardiac arrhythmia.

Science.gov (United States)

Nogawa, Hisashi; Kawai, Tomoyuki

2014-10-15

Acquired long QT syndrome induced by non-cardiovascular drugs can cause lethal cardiac arrhythmia called torsades de points and is a significant problem in drug development. The prolongation of QT interval and cardiac action potential duration are mainly due to reduced physiological function of the rapidly activating voltage-dependent potassium channels encoded by human ether-a-go-go-related gene (hERG). Structurally diverse groups of drugs are known to directly inhibit hERG channel conductance. Therefore, the ability of acute hERG inhibition is routinely assessed at the preclinical stages in pharmaceutical testing. Recent findings indicated that chronic treatment with various drugs not only inhibits hERG channels but also decreases hERG channel expression in the plasma membrane of cardiomyocytes, which has become another concern in safety pharmacology. The mechanisms involve the disruption of hERG trafficking to the surface membrane or the acceleration of hERG protein degradation. From this perspective, we present a brief overview of mechanisms of drug-induced trafficking inhibition and pathological regulation. Understanding of drug-induced hERG trafficking inhibition may provide new strategies for predicting drug-induced QT prolongation and lethal cardiac arrhythmia in pharmaceutical drug development. Copyright © 2014 Elsevier B.V. All rights reserved.

The Jurassic section along McElmo Canyon in southwestern Colorado

Science.gov (United States)

O'Sullivan, Robert B.

1997-01-01

In McElmo Canyon, Jurassic rocks are 1500-1600 ft thick. Lower Jurassic rocks of the Glen Canyon Group include (in ascending order) Wingate Sandstone, Kayenta Formation and Navajo Sandstone. Middle Jurassic rocks are represented by the San Rafael Group, which includes the Entrada Sandstone and overlying Wanakah Formation. Upper Jurassic rocks comprise the Junction Creek Sandstone overlain by the Morrison Formation. The Burro Canyon Formation, generally considered to be Lower Cretaceous, may be Late Jurassic in the McElmo Canyon area and is discussed with the Jurassic. The Upper Triassic Chinle Formation in the subsurface underlies, and the Upper Cretaceous Dakota Sandstone overlies, the Jurassic section. An unconformity is present at the base of the Glen Canyon Group (J-0), at the base of the San Rafael Group (J-2), and at the base of the Junction Creek Sandstone (J-5). Another unconformity of Cretaceous age is at the base of the Dakota Sandstone. Most of the Jurassic rocks consist of fluviatile, lacustrine and eolian deposits. The basal part of the Entrada Sandstone and the Wanakah Formation may be of marginal marine origin.

Jurassic Paleolatitudes, Paleogeography, and Climate Transitions In the Mexican Subcontinen

Science.gov (United States)

Molina-Garza, R. S.; Geissman, J. W.; Lawton, T. F.

2014-12-01

Jurassic northward migration of Mexico, trailing the North America plate, resulted in temporal evolution of climate-sensitive depositional environments. Lower-Middle Jurassic rocks in central Mexico contain a record of warm-humid conditions, which are indicated by coal and compositionally mature sandstone deposited in continental environments. Preliminary paleomagnetic data indicate that these rocks were deposited at near-equatorial paleolatitudes. The Middle Jurassic (ca. 170 Ma) Diquiyú volcanic sequence in central Oaxaca give an overall mean of D=82.2º/ I= +4.1º (n=10; k=17.3, α95=12º). In the Late Jurassic, the Gulf of Mexico formed as a subsidiary basin of the Atlantic Ocean, when the supercontinent Pangaea ruptured. Upper Jurassic strata, including eolianite and widespread evaporite deposits, across Mexico indicate dry-arid conditions. Available paleomagnetic data (compaction-corrected) from eolianites in northeast Mexico indicate deposition at ~15-20ºN. As North America moved northward during Jurassic opening of the Atlantic, different latitudinal regions experienced coeval Late Jurassic climatic shifts. Climate transitions have been widely recognized in the Colorado plateau region. The plateau left the horse-latitudes in the late Middle Jurassic to reach temperate humid climates at ~40ºN in the latest Jurassic. In turn, the southern end of the North America plate (central Mexico) reached arid horse-latitudes in the Late Jurassic. At that time, epeiric platforms developed in the circum-Gulf region after a long period of margin extension. We suggest that Upper Jurassic hydrocarbon source rocks in the circum-Gulf region accumulated on these platforms as warm epeiric hypersaline seas and the Gulf of Mexico itself were fertilized by an influx of wind-blown silt from continental regions. Additional nutrients were brought to shallow zones of photosynthesis by ocean upwelling driven by changes in the continental landmass configuration.

Mechanism and pharmacological rescue of berberine-induced hERG channel deficiency

Science.gov (United States)

Yan, Meng; Zhang, Kaiping; Shi, Yanhui; Feng, Lifang; Lv, Lin; Li, Baoxin

2015-01-01

Berberine (BBR), an isoquinoline alkaloid mainly isolated from plants of Berberidaceae family, is extensively used to treat gastrointestinal infections in clinics. It has been reported that BBR can block human ether-a-go-go-related gene (hERG) potassium channel and inhibit its membrane expression. The hERG channel plays crucial role in cardiac repolarization and is the target of diverse proarrhythmic drugs. Dysfunction of hERG channel can cause long QT syndrome. However, the regulatory mechanisms of BBR effects on hERG at cell membrane level remain unknown. This study was designed to investigate in detail how BBR decreased hERG expression on cell surface and further explore its pharmacological rescue strategies. In this study, BBR decreases caveolin-1 expression in a concentration-dependent manner in human embryonic kidney 293 (HEK293) cells stably expressing hERG channel. Knocking down the basal expression of caveolin-1 alleviates BBR-induced hERG reduction. In addition, we found that aromatic tyrosine (Tyr652) and phenylalanine (Phe656) in S6 domain mediate the long-term effect of BBR on hERG by using mutation techniques. Considering both our previous and present work, we propose that BBR reduces hERG membrane stability with multiple mechanisms. Furthermore, we found that fexofenadine and resveratrol shorten action potential duration prolongated by BBR, thus having the potential effects of alleviating the cardiotoxicity of BBR. PMID:26543354

ERG2 and ERG24 Are Required for Normal Vacuolar Physiology as Well as Candida albicans Pathogenicity in a Murine Model of Disseminated but Not Vaginal Candidiasis.

Science.gov (United States)

Luna-Tapia, Arturo; Peters, Brian M; Eberle, Karen E; Kerns, Morgan E; Foster, Timothy P; Marrero, Luis; Noverr, Mairi C; Fidel, Paul L; Palmer, Glen E

2015-10-01

Several important classes of antifungal agents, including the azoles, act by blocking ergosterol biosynthesis. It was recently reported that the azoles cause massive disruption of the fungal vacuole in the prevalent human pathogen Candida albicans. This is significant because normal vacuolar function is required to support C. albicans pathogenicity. This study examined the impact of the morpholine antifungals, which inhibit later steps of ergosterol biosynthesis, on C. albicans vacuolar integrity. It was found that overexpression of either the ERG2 or ERG24 gene, encoding C-8 sterol isomerase or C-14 sterol reductase, respectively, suppressed C. albicans sensitivity to the morpholines. In addition, both erg2Δ/Δ and erg24Δ/Δ mutants were hypersensitive to the morpholines. These data are consistent with the antifungal activity of the morpholines depending upon the simultaneous inhibition of both Erg2p and Erg24p. The vacuoles within both erg2Δ/Δ and erg24Δ/Δ C. albicans strains exhibited an aberrant morphology and accumulated large quantities of the weak base quinacrine, indicating enhanced vacuolar acidification compared with that of control strains. Both erg mutants exhibited significant defects in polarized hyphal growth and were avirulent in a mouse model of disseminated candidiasis. Surprisingly, in a mouse model of vaginal candidiasis, both mutants colonized mice at high levels and induced a pathogenic response similar to that with the controls. Thus, while targeting Erg2p or Erg24p alone could provide a potentially efficacious therapy for disseminated candidiasis, it may not be an effective strategy to treat vaginal infections. The potential value of drugs targeting these enzymes as adjunctive therapies is discussed. Copyright © 2015, American Society for Microbiology. All Rights Reserved.

Intrafocal heterogeneity of ERG protein expression and gene fusion pattern in prostate cancer.

Science.gov (United States)

Suh, Ja Hee; Park, Jeong Hwan; Lee, Cheol; Moon, Kyung Chul

2017-10-01

Prostate cancer is considered to be highly heterogeneous, with various morphologic features and biologic behaviors. The TMPRSS2-ERG gene fusion is the most frequently observed genetic aberration in prostate cancer. The aim of this study was to elucidate the intrafocal heterogeneity of ERG gene fusion status. ERG immunohistochemistry (IHC) was performed in samples from 168 prostate cancer patients who had undergone radical prostatectomy, and 40 cases showing ERG-positive IHC staining were selected for tissue microarray (TMA) construction. Two to six representative cores were selected from each tumor focus. In the cases with heterogeneous ERG IHC staining intensity, the areas showing different intensities were separately selected. Using the TMA blocks, IHC and fluorescence in situ hybridization (FISH) were conducted to evaluate the heterogeneity of ERG protein expression and ERG fusion gene patterns, respectively, in a single tumor focus. Heterogeneity of ERG IHC staining was defined as the simultaneous presence of negative and positive cores in the same tumor focus. Heterogeneity of ERG FISH was defined by the presence of cores with positive and negative FISH signals or cores with break-apart and interstitial deletion FISH signals in the same tumor focus. A total of 202 TMA cores were isolated from 40 ERG-positive cases. Of the 202 total cores, 19 were negative for ERG IHC staining, and 46 showed 1+, 52 showed 2+, and 85 showed 3+ ERG staining intensity. Eleven cores were negative for ERG FISH signal, 119 cores showed ERG break-apart FISH signals, and the remaining 72 cores revealed interstitial deletion. Intrafocal heterogeneity of ERG IHC staining was found in 20% (8/40) of cases, and intrafocal heterogeneity of ERG gene fusion pattern was found in 32.5% (13/40) of cases. In summary, this study showed significantly frequent intrafocal heterogeneity of ERG protein expression, gene fusion status and fusion pattern. This heterogeneity can be caused by the development

Mechanism and pharmacological rescue of berberine-induced hERG channel deficiency

Directory of Open Access Journals (Sweden)

Yan M

2015-10-01

Full Text Available Meng Yan,1 Kaiping Zhang,1 Yanhui Shi,1 Lifang Feng,1 Lin Lv,1 Baoxin Li1,2 1Department of Pharmacology, Harbin Medical University, 2State-Province Key Laboratory of Biopharmaceutical Engineering, Harbin, Heilongjiang, People’s Republic of China Abstract: Berberine (BBR, an isoquinoline alkaloid mainly isolated from plants of Berberidaceae family, is extensively used to treat gastrointestinal infections in clinics. It has been reported that BBR can block human ether-a-go-go-related gene (hERG potassium channel and inhibit its membrane expression. The hERG channel plays crucial role in cardiac repolarization and is the target of diverse proarrhythmic drugs. Dysfunction of hERG channel can cause long QT syndrome. However, the regulatory mechanisms of BBR effects on hERG at cell membrane level remain unknown. This study was designed to investigate in detail how BBR decreased hERG expression on cell surface and further explore its pharmacological rescue strategies. In this study, BBR decreases caveolin-1 expression in a concentration-dependent manner in human embryonic kidney 293 (HEK293 cells stably expressing hERG channel. Knocking down the basal expression of caveolin-1 alleviates BBR-induced hERG reduction. In addition, we found that aromatic tyrosine (Tyr652 and phenylalanine (Phe656 in S6 domain mediate the long-term effect of BBR on hERG by using mutation techniques. Considering both our previous and present work, we propose that BBR reduces hERG membrane stability with multiple mechanisms. Furthermore, we found that fexofenadine and resveratrol shorten action potential duration prolongated by BBR, thus having the potential effects of alleviating the cardiotoxicity of BBR. Keywords: berberine, hERG, cavoline-1, cardiotoxicity, LQTS, pharmacological rescue

The transcription factor ERG increases expression of neurotransmitter receptors on prostate cancer cells

International Nuclear Information System (INIS)

Kissick, Haydn T.; On, Seung T.; Dunn, Laura K.; Sanda, Martin G.; Asara, John M.; Pellegrini, Kathryn L.; Noel, Jonathan K.; Arredouani, Mohamed S.

2015-01-01

The TMPRSS2-ERG gene fusion occurs in about half of prostate cancer (PCa) cases and results in overexpression of the transcription factor ERG. Overexpression of ERG has many effects on cellular function. However, how these changes enhance cell growth and promote tumor development is unclear. To investigate the role of ERG, LNCaP and PC3 cells were transfected with ERG and gene expression and metabolic profile were analyzed. Our data show that expression of ERG induces overexpression of many nicotinicacetylcholine receptors (nAChRs). In addition, metabolic profiling by LC-MS/MS revealed elevated production of several neurotransmitters in cells expressing ERG. Consistently, treatment of ERG-expressing cells with nicotine induced elevated calcium influx, GSK3β (Ser9) phosphorylation and cell proliferation. Finally, we show that PCa patientswho are smokers have larger tumors if their tumors are TMPRSS2-ERG gene fusion positive. Collectively, our data suggest that ERG sensitizes prostate tumor cells to neurotransmitter receptor agonists like nicotine. The online version of this article (doi:10.1186/s12885-015-1612-3) contains supplementary material, which is available to authorized users

ERG review of containment failure probability and repository functional design criteria

International Nuclear Information System (INIS)

Gopal, S.

1986-06-01

The Engineering Review Group (ERG) was established by the Office of Nuclear Waste Isolation (ONWI) to help evaluate engineering-related issues in the US Department of Energy's nuclear waste repository program. The June 1984 meeting of the ERG considered two topics: (1) statistical probability for containment of nuclides within the waste package and (2) repository design criteria. This report documents the ERG's comments and recommendations on these two subjects and the ONWI response to the specific points raised by ERG

Geology and resources of the Tar Sand Triangle, southeastern Utah

Energy Technology Data Exchange (ETDEWEB)

Dana, G.F.; Oliver, R.L.; Elliott, J.R.

1984-05-01

The Tar Sand Triangle is located in southeastern Utah between the Dirty Devil and Colorado Rivers and covers an area of about 200 square miles. The geology of the area consists of gently northwest dipping strata exposed in the box canyons and slopes of the canyonlands morphology. Strata in the area range in age from Jurassic to Permian. The majority of tar sand saturation is found in the Permian White Rim Sandstone Member of the Cutler Formation. The White Rim Sandstone Member consists of a clean, well-sorted sandstone which was deposited in a shallow marine environment. Resources were calculated from analytical data from the three coreholes drilled by the Laramie Energy Technology Center and other available data. The total in-place resources, determined from this study, are 6.3 billion barels. Previous estimates ranged from 2.9 to 16 million barrels. More coring and analyses will be necessary before a more accurate determination of resources can be attempted. 8 references, 11 figures, 7 tables.

Voltage-Dependent Gating of hERG Potassium Channels

Science.gov (United States)

Cheng, Yen May; Claydon, Tom W.

2012-01-01

The mechanisms by which voltage-gated channels sense changes in membrane voltage and energetically couple this with opening of the ion conducting pore has been the source of significant interest. In voltage-gated potassium (Kv) channels, much of our knowledge in this area comes from Shaker-type channels, for which voltage-dependent gating is quite rapid. In these channels, activation and deactivation are associated with rapid reconfiguration of the voltage-sensing domain unit that is electromechanically coupled, via the S4–S5 linker helix, to the rate-limiting opening of an intracellular pore gate. However, fast voltage-dependent gating kinetics are not typical of all Kv channels, such as Kv11.1 (human ether-à-go-go related gene, hERG), which activates and deactivates very slowly. Compared to Shaker channels, our understanding of the mechanisms underlying slow hERG gating is much poorer. Here, we present a comparative review of the structure–function relationships underlying activation and deactivation gating in Shaker and hERG channels, with a focus on the roles of the voltage-sensing domain and the S4–S5 linker that couples voltage sensor movements to the pore. Measurements of gating current kinetics and fluorimetric analysis of voltage sensor movement are consistent with models suggesting that the hERG activation pathway contains a voltage independent step, which limits voltage sensor transitions. Constraints upon hERG voltage sensor movement may result from loose packing of the S4 helices and additional intra-voltage sensor counter-charge interactions. More recent data suggest that key amino acid differences in the hERG voltage-sensing unit and S4–S5 linker, relative to fast activating Shaker-type Kv channels, may also contribute to the increased stability of the resting state of the voltage sensor. PMID:22586397

Voltage-dependent gating of hERG potassium channels

Directory of Open Access Journals (Sweden)

Yen May eCheng

2012-05-01

Full Text Available The mechanisms by which voltage-gated channels sense changes in membrane voltage and energetically couple this with opening of the ion conducting pore has been the source of significant interest. In voltage-gated potassium (Kv channels, much of our knowledge in this area comes from Shaker-type channels, for which voltage-dependent gating is quite rapid. In these channels, activation and deactivation are associated with rapid reconfiguration of the voltage-sensing domain unit that is electromechanically coupled, via the S4-S5 linker helix, to the rate-limiting opening of an intracellular pore gate. However, fast voltage-dependent gating kinetics are not typical of all Kv channels, such as Kv11.1 (human ether-a-go-go related gene, hERG, which activates and deactivates very slowly. Compared to Shaker channels, our understanding of the mechanisms underlying slow hERG gating is much poorer. Here, we present a comparative review of the structure-function relationships underlying voltage-dependent gating in Shaker and hERG channels, with a focus on the roles of the voltage sensing domain and the S4-S5 linker that couples voltage sensor movements to the pore. Measurements of gating current kinetics and fluorimetric analysis of voltage sensor movement are consistent with models suggesting that the hERG activation pathway contains a voltage independent step, which limits voltage sensor transitions. Constraints upon hERG voltage sensor movement may result from loose packing of the S4 helices and additional intra-voltage sensor counter charge interactions. More recent data suggest that key amino acid differences in the hERG voltage sensing unit and S4-S5 linker, relative to fast activating Shaker-type Kv channels, may also contribute to the increased stability of the resting state of the voltage sensor.

In vitro chronic effects on hERG channel caused by the marine biotoxin Yessotoxin.

Directory of Open Access Journals (Sweden)

Sara Fernández Ferreiro

2014-06-01

Currently, published evidence indicates that hERG channel dysfunction can be due to more than one mechanism for many drugs (Guth, 2007. Alterations of hERG channel trafficking are considered an important factor in hERG-related cardiotoxicity. Actually, a screening study revealed that almost 40% of the drugs that block Ikr have also trafficking effects (Wible et al., 2005. Although YTX does not block hERG channels, it has been historically described as cardiotoxic due to in vivo damage to cardiomyocytes. Our results show that YTX induces a significant increase of hERG channel levels on the extracellular side of the plasma membrane in vitro. YTX causes cell death in many cell lines (Korsnes and Espenes, 2011 and the alterations of surface hERG levels might be related to the apoptotic process. However, annexin-V, a relatively early marker of apoptosis (Vermes et al., 1995, occurs later than the increase of surface hERG. Additionally, staurosporine triggered apoptosis without a simultaneous increase of surface hERG, so events are not necessarily related. Therefore YTX-induced elevated hERG in the plasma membrane seem to be independent of apoptosis. Functional implications of hERG currents have been described after alterations of cell surface hERG density (Guth, 2007. YTX did not cause significant alterations of hERG currents. Furthermore the hERG levels after YTX treatment were duplicated, so the effect on currents should be clearly evidenced if these channels were functional. The hERG channels on the cell surface are regulated by its production, translocation to the plasma membrane and degradation. The increase of extracellular channel could be a consequence of a higher production and externalization or a slower degradation. Higher synthesis in our cell model would not be physiologically relevant but our results demonstrated that the amount of immature hERG is reduced instead of increased. Fully glycosylated hERG seems slightly increased in these conditions but it is

ERG oncoprotein expression in prostate carcinoma patients of different ethnicities

OpenAIRE

KELLY, GREGORY M.; KONG, YINK HEAY; DOBI, ALBERT; SRIVASTAVA, SHIV; SESTERHENN, ISABELL A.; PATHMANATHAN, RAJADURAI; TAN, HUI MENG; TAN, SHYH-HAN; CHEONG, SOK CHING

2014-01-01

Overexpression of the erythroblast transformation-specific-related gene (ERG) oncoprotein due to transmembrane protease, serine 2 (TMPRSS2)-ERG fusion, the most prevalent genomic alteration in prostate cancer (CaP), is more frequently observed among Caucasian patients compared to patients of African or Asian descent. To the best of our knowledge, this is the first study to investigate the prevalence of ERG alterations in a multiethnic cohort of CaP patients. A total of 191 formalin-fixed para...

Shaly sand evaluation using gamma ray spectrometry, applied to the North Sea Jurassic

International Nuclear Information System (INIS)

Marett, G.; Chevalier, P.; Souhaite, P.; Suau, J.

1976-01-01

In formations where radioactive minerals other than clay are present, their effects on log responses result in a reduction of the accuracy of determination of the shale fraction. The gamma ray log, which is one of the primary indicators for shaliness determination, is the most affected; other logs used in shaliness indicators are also influenced, particularly when heavy minerals are present, such as those encountered in the micaceous sandstones of the North Sea Jurassic. For comparison purposes, possible ways to correct for heavy radioactive minerals using a conventional logging suite are described. Computer processed examples illustrate the results obtained. A different approach is through an analysis of the natural gamma ray spectrum of the formation, as determined with the gamma ray spectrometry tool. Natural gamma rays originate from the radioactive isotope of potassium and the radioactive elements of the uranium and thorium series. Each of these three elements contributes its distinctive spectrum to that of the formation in proportion to its abundance. Thus, by analysis of the formation spectrum, the presence of each can be detected and its amount estimated. This makes possible quantitative corrections to the shaliness indicators. A computer program which performs the necessary computations is described, and several log examples using this technique are presented

JURASSIC PALEONTOLOGICAL HERITAGE OF MURCIA (BETIC CORDILLERA, SOUTH-EASTERN SPAIN

Directory of Open Access Journals (Sweden)

GREGORIO ROMERO

2004-03-01

Full Text Available Jurassic rocks of the External and Internal Zones of the Betic Cordillera are widespread in the province of Murcia. Four areas are considered of special interest for stratigraphical and paleontological analysis: a Sierra Quípar and b Sierras Lúgar-Corque (External Subbetic, c Sierra Ricote (Median Subbetic and d Sierra Espuña (Malaguide Complex. The first two contain Jurassic sections including Sinemurian-Tithonian deposits, and major stratigraphic discontinuities, containing significant cephalopod concentrations of taphonomic and taxonomic interest, occuring in the Lower-Upper Pliensbachian, Lower/Middle Jurassic and Middle/Upper Jurassic boundaries. These areas are also relevant for biostratigraphical analysis of the Middle-Upper Jurassic interval. In the Sierra de Ricote, the Mahoma section is of especial interest for the study of Lías/Dogger transition. Casa Chimeneas section constitutes the best Subbetic site for the analysis of the Lower/Upper Bajocian boundary. In the La Bermeja-Casas de Vite area, the Bajocian-Tithonian interval is well-represented, including a parastratotype of the Radiolarite Jarropa Formation. Finally, the Malvariche section in Sierra Espuña represents the best Jurassic succession of Internal Zones of the Betic Cordillera and could be considered as a reference section for this Betic Domain. In this paper a heritage evaluation has been carried out for these classical jurassic sections with the object of protecting these sites according to the legal framework prevailing in the province of Murcia.

Inhibitory effects and mechanism of dihydroberberine on hERG channels expressed in HEK293 cells.

Directory of Open Access Journals (Sweden)

Dahai Yu

Full Text Available The human ether-a-go-go-related gene (hERG potassium channel conducts rapid delayed rectifier potassium currents (IKr and contributes to phase III cardiac action potential repolarization. Drugs inhibit hERG channels by binding to aromatic residues in hERG helixes. Berberine (BBR has multiple actions, and its hydrogenated derivative dihydroberberine (DHB is a potential candidate for developing new drugs. Previous studies have demonstrated that BBR blocks hERG channels and prolongs action potential duration (APD. Our present study aimed to investigate the effects and mechanism of DHB on hERG channels. Protein expression and the hERG current were analyzed using western blotting and patch-clamp, respectively. DHB inhibited the hERG current concentration-dependently after instantaneous perfusion, accelerated channel inactivation by directly binding tyrosine (Tyr652 and phenylalanine (Phe656, and decreased mature (155-kDa and simultaneously increased immature (135-kDa hERG expression, respectively. This suggests disruption of forward trafficking of hERG channels. Besides, DHB remarkably reduced heat shock protein 90 (Hsp90 expression and its interaction with hERG, indicating that DHB disrupted hERG trafficking by impairing channel folding. Meanwhie, DHB enhanced the expression of cleaved activating transcription factor-6 (ATF-6, a biomarker of unfolded protein response (UPR. Expression of calnexin and calreticulin, chaperones activated by ATF-6 to facilitate channel folding, were also increased, which indicating UPR activation. Additionally, the degradation rate of mature 155-kDa hERG increased following DHB exposure. In conclusion, we demonstrated that DHB acutely blocked hERG channels by binding the aromatic Tyr652 and Phe656. DHB may decrease hERG plasma membrane expression through two pathways involving disruption of forward trafficking of immature hERG channels and enhanced degradation of mature hERG channels. Furthermore, forward trafficking was

[Follow-up on MEWDS by fundus perimetry and multifocal ERG with the SLO].

Science.gov (United States)

Bültmann, S; Martin, M; Rohrschneider, K

2002-09-01

Most conventional techniques for examination such as perimetry or ERG may not be sensitive enough to detect functional alterations due to MEWDS precisely. We report on a follow-up performed by fundus perimetry and the new technique of multifocal ERG using the scanning laser ophthalmoscope. A 24-year-old female patient (VA 0.2/0.8) was followed up for 7 weeks with these techniques as well as Octopus perimetry, fluorescence angiography, Ganzfeld ERG and biomicroscopy. Multifocal ERG stimulation (mfERG, Retiscan) was performed with the SLO. Visual acuity improved from 0.2 to 0.8 and the central relative scotoma disappeared while a relevant increase of P1-wave amplitudes in mfERG could be observed. Combining objective measurements from the fundus controlled SLO-mfERG and results from fundus perimetry enable good correlation of morphology and results, even for minor alterations of the macula only accessible by few established clinical examinations.

Antineoplastic Effects of siRNA against TMPRSS2-ERG Junction Oncogene in Prostate Cancer.

Directory of Open Access Journals (Sweden)

Giorgia Urbinati

Full Text Available TMPRSS2-ERG junction oncogene is present in more than 50% of patients with prostate cancer and its expression is frequently associated with poor prognosis. Our aim is to achieve gene knockdown by siRNA TMPRSS2-ERG and then to assess the biological consequences of this inhibition. First, we designed siRNAs against the two TMPRSS2-ERG fusion variants (III and IV, most frequently identified in patients' biopsies. Two of the five siRNAs tested were found to efficiently inhibit mRNA of both TMPRSS2-ERG variants and to decrease ERG protein expression. Microarray analysis further confirmed ERG inhibition by both siRNAs TMPRSS2-ERG and revealed one common down-regulated gene, ADRA2A, involved in cell proliferation and migration. The siRNA against TMPRSS2-ERG fusion variant IV showed the highest anti-proliferative effects: Significantly decreased cell viability, increased cleaved caspase-3 and inhibited a cluster of anti-apoptotic proteins. To propose a concrete therapeutic approach, siRNA TMPRSS2-ERG IV was conjugated to squalene, which can self-organize as nanoparticles in water. The nanoparticles of siRNA TMPRSS2-ERG-squalene injected intravenously in SCID mice reduced growth of VCaP xenografted tumours, inhibited oncoprotein expression and partially restored differentiation (decrease in Ki67. In conclusion, this study offers a new prospect of treatment for prostate cancer based on siRNA-squalene nanoparticles targeting TMPRSS2-ERG junction oncogene.

Development of Peptidomimetic Inhibitors of the ERG Gene Fusion Product in Prostate Cancer.

Science.gov (United States)

Wang, Xiaoju; Qiao, Yuanyuan; Asangani, Irfan A; Ateeq, Bushra; Poliakov, Anton; Cieślik, Marcin; Pitchiaya, Sethuramasundaram; Chakravarthi, Balabhadrapatruni V S K; Cao, Xuhong; Jing, Xiaojun; Wang, Cynthia X; Apel, Ingrid J; Wang, Rui; Tien, Jean Ching-Yi; Juckette, Kristin M; Yan, Wei; Jiang, Hui; Wang, Shaomeng; Varambally, Sooryanarayana; Chinnaiyan, Arul M

2017-04-10

Transcription factors play a key role in the development of diverse cancers, and therapeutically targeting them has remained a challenge. In prostate cancer, the gene encoding the transcription factor ERG is recurrently rearranged and plays a critical role in prostate oncogenesis. Here, we identified a series of peptides that interact specifically with the DNA binding domain of ERG. ERG inhibitory peptides (EIPs) and derived peptidomimetics bound ERG with high affinity and specificity, leading to proteolytic degradation of the ERG protein. The EIPs attenuated ERG-mediated transcription, chromatin recruitment, protein-protein interactions, cell invasion and proliferation, and tumor growth. Thus, peptidomimetic targeting of transcription factor fusion products may provide a promising therapeutic strategy for prostate cancer as well as other malignancies. Copyright © 2017 Elsevier Inc. All rights reserved.

ERG and other discriminators between advanced hydroxychloroquine retinopathy and retinitis pigmentosa.

Science.gov (United States)

Nair, Archana A; Marmor, Michael F

2017-06-01

To study whether the ERG and other clinical findings help to distinguish between advanced hydroxychloroquine (HCQ) retinopathy and pericentral or diffuse retinitis pigmentosa (RP) with similar fundus appearance. We conducted a retrospective analysis of patients with advanced HCQ retinopathy (n = 11), pericentral RP (n = 8) and diffuse RP (n = 8). Pericentral RP was defined as having limited fundus damage and relatively normal flicker ERG time-to-peak. Diffuse RP had typical loss of the rod ERG and flicker timing delay. All patients showed reduced amplitude of the ISCEV responses in the full-field electroretinogram (ERG). Aspects of history, visual field results, fundus appearance, fundus autofluorescence and ocular coherence tomography were also compared. Relative to pericentral RP, patients with HCQ toxicity showed delayed flicker ERG time-to-peak and lower ERG amplitudes, particularly combined rod-cone responses. Relative to diffuse RP, most HCQ toxicity patients had some preserved rod ERG response, and there was no obvious predilection for rod over cone damage. In addition, patients with HCQ toxicity usually lacked markers of long-standing degeneration such as bone spicule figures or severe loss of peripheral field. History of familial disease and long-standing night blindness were specific to RP. While the early signs of HCQ damage are typically regional in the posterior pole, advanced disease is characteristically diffuse (unlike pericentral RP). This is appropriate for a systemic toxin, as is the finding that rods and cones were both affected in the ERG to a similar degree (unlike genetic rod-cone dystrophies). For patients with severe HCQ exposure and some of our discriminatory findings, and no family history or prior night blindness, HCQ toxicity is a sufficient diagnosis without invoking a second rare disease (Occam's razor).

Middle to Late Jurassic Tectonic Evolution of the Klamath Mountains, California-Oregon

Science.gov (United States)

Harper, Gregory D.; Wright, James E.

1984-12-01

The geochronology, stratigraphy, and spatial relationships of Middle and Late Jurassic terranes of the Klamath Mountains strongly suggest that they were formed in a single west-facing magmatic arc built upon older accreted terranes. A Middle Jurassic arc complex is represented by the volcanic rocks of the western Hayfork terrane and consanguineous dioritic to peridotitic plutons. New U/Pb zircon dates indicate that the Middle Jurassic plutonic belt was active from 159 to 174 Ma and is much more extensive than previously thought. This plutonic belt became inactive just as the 157 Ma Josephine ophiolite, which lies west and structurally below the Middle Jurassic arc, was generated. Late Jurassic volcanic and plutonic arc rocks (Rogue Formation and Chetco intrusive complex) lie outboard and structurally beneath the Josephine ophiolite; U/Pb and K/Ar age data indicate that this arc complex is coeval with the Josephine ophiolite. Both the Late Jurassic arc complex and the Josephine ophiolite are overlain by the "Galice Formation," a Late Jurassic flysch sequence, and are intruded by 150 Ma dikes and sills. The following tectonic model is presented that accounts for the age and distribution of these terranes: a Middle Jurassic arc built on older accreted terranes undergoes rifting at 160 Ma, resulting in formation of a remnant arc/back-arc basin/island arc triad. This system collapsed during the Late Jurassic Nevadan Orogeny (150 Ma) and was strongly deformed and stacked into a series of east-dipping thrust sheets. Arc magmatism was active both before and after the Nevadan Orogeny, but virtually ceased at 140 Ma.

Channel sialic acids limit hERG channel activity during the ventricular action potential.

Science.gov (United States)

Norring, Sarah A; Ednie, Andrew R; Schwetz, Tara A; Du, Dongping; Yang, Hui; Bennett, Eric S

2013-02-01

Activity of human ether-a-go-go-related gene (hERG) 1 voltage-gated K(+) channels is responsible for portions of phase 2 and phase 3 repolarization of the human ventricular action potential. Here, we questioned whether and how physiologically and pathophysiologically relevant changes in surface N-glycosylation modified hERG channel function. Voltage-dependent hERG channel gating and activity were evaluated as expressed in a set of Chinese hamster ovary (CHO) cell lines under conditions of full glycosylation, no sialylation, no complex N-glycans, and following enzymatic deglycosylation of surface N-glycans. For each condition of reduced glycosylation, hERG channel steady-state activation and inactivation relationships were shifted linearly by significant depolarizing ∼9 and ∼18 mV, respectively. The hERG window current increased significantly by 50-150%, and the peak shifted by a depolarizing ∼10 mV. There was no significant change in maximum hERG current density. Deglycosylated channels were significantly more active (20-80%) than glycosylated controls during phases 2 and 3 of action potential clamp protocols. Simulations of hERG current and ventricular action potentials corroborated experimental data and predicted reduced sialylation leads to a 50-70-ms decrease in action potential duration. The data describe a novel mechanism by which hERG channel gating is modulated through physiologically and pathophysiologically relevant changes in N-glycosylation; reduced channel sialylation increases hERG channel activity during the action potential, thereby increasing the rate of action potential repolarization.

Multifocal ERG wavelet packet decomposition applied to glaucoma diagnosis

Directory of Open Access Journals (Sweden)

Rodríguez-Ascariz José M

2011-05-01

Full Text Available Abstract Background Glaucoma is the second-leading cause of blindness worldwide and early diagnosis is essential to its treatment. Current clinical methods based on multifocal electroretinography (mfERG essentially involve measurement of amplitudes and latencies and assume standard signal morphology. This paper presents a new method based on wavelet packet analysis of global-flash multifocal electroretinogram signals. Methods This study comprised twenty-five patients diagnosed with OAG and twenty-five control subjects. Their mfERG recordings data were used to develop the algorithm method based on wavelet packet analysis. By reconstructing the third wavelet packet contained in the fourth decomposition level (ADAA4 of the mfERG recording, it is possible to obtain a signal from which to extract a marker in the 60-80 ms time interval. Results The marker found comprises oscillatory potentials with a negative-slope basal line in the case of glaucomatous recordings and a positive-slope basal line in the case of normal signals. Application of the optimal threshold calculated in the validation cases showed that the technique proposed achieved a sensitivity of 0.81 and validation specificity of 0.73. Conclusions This new method based on mfERG analysis may be reliable enough to detect functional deficits that are not apparent using current automated perimetry tests. As new stimulation and analysis protocols develop, mfERG has the potential to become a useful tool in early detection of glaucoma-related functional deficits.

Dynamic regulation of canonical TGFβ signalling by endothelial transcription factor ERG protects from liver fibrogenesis.

Science.gov (United States)

Dufton, Neil P; Peghaire, Claire R; Osuna-Almagro, Lourdes; Raimondi, Claudio; Kalna, Viktoria; Chuahan, Abhishek; Webb, Gwilym; Yang, Youwen; Birdsey, Graeme M; Lalor, Patricia; Mason, Justin C; Adams, David H; Randi, Anna M

2017-10-12

The role of the endothelium in protecting from chronic liver disease and TGFβ-mediated fibrosis remains unclear. Here we describe how the endothelial transcription factor ETS-related gene (ERG) promotes liver homoeostasis by controlling canonical TGFβ-SMAD signalling, driving the SMAD1 pathway while repressing SMAD3 activity. Molecular analysis shows that ERG binds to SMAD3, restricting its access to DNA. Ablation of ERG expression results in endothelial-to-mesenchymal transition (EndMT) and spontaneous liver fibrogenesis in EC-specific constitutive hemi-deficient (Erg cEC-Het ) and inducible homozygous deficient mice (Erg iEC-KO ), in a SMAD3-dependent manner. Acute administration of the TNF-α inhibitor etanercept inhibits carbon tetrachloride (CCL 4 )-induced fibrogenesis in an ERG-dependent manner in mice. Decreased ERG expression also correlates with EndMT in tissues from patients with end-stage liver fibrosis. These studies identify a pathogenic mechanism where loss of ERG causes endothelial-dependent liver fibrogenesis via regulation of SMAD2/3. Moreover, ERG represents a promising candidate biomarker for assessing EndMT in liver disease.The transcription factor ERG is key to endothelial lineage specification and vascular homeostasis. Here the authors show that ERG balances TGFβ signalling through the SMAD1 and SMAD3 pathways, protecting the endothelium from endothelial-to-mesenchymal transition and consequent liver fibrosis in mice via a SMAD3-dependent mechanism.

The Influence of Brightness on Functional Assessment by mfERG

DEFF Research Database (Denmark)

Christiansen, A T; Kiilgaard, J F; Smith, M

2012-01-01

To determine the effect of membrane brightness on multifocal electroretinograms (mfERGs), we implanted poly lactic-co-glycolic acid (PLGA) membranes in the subretinal space of 11 porcine eyes. We compared membranes with their native shiny white color with membranes that were stained with a blue dye...... (Brilliant Blue). Histological and electrophysiological evaluation of the overlying retina was carried out 6 weeks after implantation. Histologically, both white and blue membranes degraded in a spongiform manner leaving a disrupted outer retina with no preserved photoreceptor segments. Multifocal ERG...... when the adjacent photoreceptors are missing. Functional assessment with mfERG in scaffold implant studies should therefore be evaluated with care....

A comparison of two patient friendly ERG electrodes

International Nuclear Information System (INIS)

Hidajat, R.; McLay, J.; Elder, M.; Burley, C.; Goode, D.; Morton, J.

2000-01-01

Full text: The ideal electroretinography (ERG) electrode should provide reproducible waveforms, maximal amplitudes and minimal irritation of the patient's eyes. Contact lens electrodes (e.g. Burian-Allen, ERG jet) generate large amplitudes but are very uncomfortable and quite intimidating for the patient. Two other types, the gold foil and the H-K loop, provide a much more patient friendly alternative at the cost of somewhat reduced amplitudes. With the purchase of a new Nicolet Bravo electrodiagnostic system we had to select a suitable type of ERG electrode and establish the normal range for each ERG test with that electrode. It was decided to trial two electrodes, the gold foil (CH Electronics, UK) and the H-K loop (Avanta, Slovenia) before making the final choice. Seventeen normal volunteers, ranging in age from 14 to 56 years, were subjected to three standard measurements namely the flash photopic, white flash scotopic and transient pattern (PERG) ERG. Each test followed the guidelines set by the International Society for Clinical Electrophysiology of Vision (ISCEV). Before starting the measurements both eyes were anaesthetised with Ophthetic and for the flash ERG's the pupils were dilated with 1% Tropicamide. Immediately after the measurements each subject was asked which electrode was most comfortable. As specified by ISCEV the amplitudes were measured between adjacent troughs and peaks. The mean and standard deviation of the flash ERG b wave and the PERG P 50 amplitudes for each electrode are shown m the accompanying table together with the mean and standard deviation of the ratios of the amplitudes (gold foil/H-K loop) from each subject. It can be seen that the amplitudes measured with the gold foil electrodes are approximately twice those from the H-K loop and that the fractional variation (standard deviation/mean) of the gold foil amplitudes is also lower. In addition nearly all the subjects (13/17) felt less discomfort with the gold foil electrodes, only

SICILIAN JURASSIC PHYSIOGRAPHY AND GEOLOGIC REALMS (ITALY

Directory of Open Access Journals (Sweden)

BENEDETTO ABATE

2004-03-01

Full Text Available Two tectono-sedimentary domains, which were deformed during the Neogene and evolved into two large structural sectors, characterize the Sicilian Jurassic: the Maghrebides and Peloritani. Africa margin sediments, passing downward to Triassic successions and perhaps originally to Paleozoic deposits, characterize the former. The latter belongs to the European "Calabrian Arc", where the Jurassic transgressively rests on a continental substrate (i.e. the crystalline Variscan basement. These domains are characterized by four sedimentary facies: shallow platform-derived limestones; condensed seamount-type red limestones; nodular limestones with ammonites; deep radiolarites and shales. These facies are illustrated in a dozen of stratigraphic logs. The drowning of most Triassic-Liassic carbonate platforms or ramps and the deepening of adjacent basins came with inferred Jurassic strike-slip tectonics, connected to the relative movement of Africa (Gondwanan part vs Europe (Laurasian part; the same strike-slip tectonics may have caused scattered intraplate volcanic seamounts found in Maghrebides. During the Jurassic the Maghrebide realm was characterized by the interfingering of basins and carbonate platforms. During the Early and Middle Liassic, carbonate platforms and ramps were dominant. Since Toarcian either radiolarites in some basins or Ammonite-bearing calcareous muds developed with intervening basaltic flows, and were accompanied by condensed pelagic carbonates on the ensialic seamount-type highs. The Peloritani realm displays similar characteristics, but with later transgression on the basement, several strike-slip basins and without any volcanoes.

Theory, modeling, and integrated studies in the Arase (ERG) project

Science.gov (United States)

Seki, Kanako; Miyoshi, Yoshizumi; Ebihara, Yusuke; Katoh, Yuto; Amano, Takanobu; Saito, Shinji; Shoji, Masafumi; Nakamizo, Aoi; Keika, Kunihiro; Hori, Tomoaki; Nakano, Shin'ya; Watanabe, Shigeto; Kamiya, Kei; Takahashi, Naoko; Omura, Yoshiharu; Nose, Masahito; Fok, Mei-Ching; Tanaka, Takashi; Ieda, Akimasa; Yoshikawa, Akimasa

2018-02-01

Understanding of underlying mechanisms of drastic variations of the near-Earth space (geospace) is one of the current focuses of the magnetospheric physics. The science target of the geospace research project Exploration of energization and Radiation in Geospace (ERG) is to understand the geospace variations with a focus on the relativistic electron acceleration and loss processes. In order to achieve the goal, the ERG project consists of the three parts: the Arase (ERG) satellite, ground-based observations, and theory/modeling/integrated studies. The role of theory/modeling/integrated studies part is to promote relevant theoretical and simulation studies as well as integrated data analysis to combine different kinds of observations and modeling. Here we provide technical reports on simulation and empirical models related to the ERG project together with their roles in the integrated studies of dynamic geospace variations. The simulation and empirical models covered include the radial diffusion model of the radiation belt electrons, GEMSIS-RB and RBW models, CIMI model with global MHD simulation REPPU, GEMSIS-RC model, plasmasphere thermosphere model, self-consistent wave-particle interaction simulations (electron hybrid code and ion hybrid code), the ionospheric electric potential (GEMSIS-POT) model, and SuperDARN electric field models with data assimilation. ERG (Arase) science center tools to support integrated studies with various kinds of data are also briefly introduced.[Figure not available: see fulltext.

Tectonic forcing of early to middle jurassic seawater Sr/Ca

DEFF Research Database (Denmark)

Ullmann, Clemens Vinzenz; Hesselbo, Stephen P.; Korte, Christoph

2013-01-01

The Jurassic Period (ca. 201–145 Ma) is marked by fundamental reorganizations of paleogeography, paleoceanography, ecosystems, and the progressive shift from aragonite to calcite as the favored marine biogenic carbonate polymorph. Sr/Ca ratios of well-preserved Jurassic oysters and belemnites from...

YK-4-279 inhibits ERG and ETV1 mediated prostate cancer cell invasion.

Directory of Open Access Journals (Sweden)

Said Rahim

2011-04-01

Full Text Available Genomic rearrangements involving the ETS family of transcription factors occur in 40-70% of prostate cancer cases. ERG and ETV1 are the most common ETS members observed in these genetic alterations. The high prevalence of these rearrangements and their biological significance represents a novel therapeutic target for the treatment of prostate cancer.We recently reported the development of YK-4-279, a small molecule inhibitor of EWS-FLI1 oncoprotein in Ewing's Sarcoma. Since ERG and ETV1 belong to the same class of ETS factors as FLI1, we tested the ability of YK-4-279 to inhibit biological functions of ERG and ETV1 proteins in prostate cancer. YK-4-279 inhibited ERG and ETV1 mediated transcriptional activity in a luciferase assay. YK-4-279 also decreased ERG and ETV1 downstream target mRNA and protein expression in ETV1-fusion positive LNCaP and ERG fusion positive VCaP cells. YK-4-279 reduced the motility of LNCaP cells in a scratch assay and the invasive phenotype of both LNCaP and VCaP cells in a HUVEC invasion assay. Fusion-negative PC3 cells were unresponsive to YK-4-279. SiRNA mediated ERG knockdown in VCaP cells resulted in a loss of drug responsiveness. Concurrently, transient ERG expression in PC-3 cells resulted in increased invasive potential, which was reduced by YK-4-279.These data demonstrate that YK-4-279 inhibits ERG and ETV1 biological activity in fusion-positive prostate cancer cells leading to decreased motility and invasion. Therefore, YK-4-279 may have an impact on metastasis in prostate cancer and it may be further evaluated for its clinical applications in prostate cancer in addition to Ewing's sarcoma.

Marine Jurassic lithostratigraphy of Thailand

Science.gov (United States)

Meesook, A.; Grant-Mackie, J. A.

Marine Jurassic rocks of Thailand are well-exposed in the Mae Sot and Umphang areas and less extensively near Mae Hong Son, Kanchanaburi, Chumphon and Nakhon Si Thammarat, in the north, west, and south respectively. They are generally underlain unconformably by Triassic and overlain by Quaternary strata. Based mainly on five measured sections, fourteen new lithostratigraphic units are established: (in ascending order) Pa Lan, Mai Hung and Kong Mu Formations of the Huai Pong Group in the Mae Hong Son area; Khun Huai, Doi Yot and Pha De Formations of the Hua Fai Group in the Mae Sot area; Klo Tho, Ta Sue Kho, Pu Khloe Khi and Lu Kloc Tu Formations of the Umphang Group in the Umphang area; and the Khao Lak Formation in the Chumphon area. Mudstone, siltstone, sandstone, limestone and marl are the dominant lithologies. Mudstones, siltstones and sandstones are widespread; limestones are confined to the Mae Sot, Umphang, Kanchanaburi and Mae Hong Son areas; marls are found only in Mae Sot. The sequences are approximately 900 m thick in Mae Sot and 450 m thick in Umphang and are rather thinner in the other areas, particularly in the south. Based on ammonites, with additional data from bivalves and foraminifera, the marine Jurassic is largely Toarcian-Aalenian plus some Bajocian. Late Jurassic ages given previously for strata in the Mae Sot and Umphang areas have not been confirmed.

Diversity and paleogeographic distribution of Early Jurassic plesiosaurs

Science.gov (United States)

Vincent, Peggy; Suan, Guillaume

2010-05-01

Early Jurassic plesiosaurs, a group of extinct marine reptiles, were one of the first groups to be described in the history of vertebrate paleontology. Nevertheless, the paleogeographic distribution and the taxonomic diversity of these forms are still unclear, particularly because most descriptions and taxonomic attributions were realized during the mid 19th to early 20th century. Here we investigate the paleodiversity and paleogeographic distribution of Early Jurassic plesiosaurs using an extensive taxonomic and anatomical revision of most known Early Jurassic specimens. We also present an examination of the biostratigraphic and sedimentological framework of deposits in which these specimens were discovered, in order to decipher whether their fossil record reflects primary paleobiological trends or taphonomic/discovery biases. Early Jurassic Plesiosaur diversity appears to reach its maximum during the Toarcian (falciferum-bifrons ammonite zones). Nevertheless, the inclusion of ghost lineages into the diversity curves indicates that this pattern likely reflects discovery and taphonomical biases rather than primary biodiversity trends. Indeed, most strata where numerous plesiosaurs species were discovered correspond to sediments that were deposited under poorly-oxygenated conditions and exploited at least in a semi-industrial way during the 1800's-1950's. The Lower Jurassic fossiliferous localities that yielded identifiable plesiosaur species are only found in Western Europe (England, Germany, and France). In Europe, the Toarcian stage is the only interval where more than one fossiliferous locality is known (the Hettangian, Sinemurian and Pliensbachian stages being each represented by only one locality where specimens are identifiable at the species level). The different Toarcian fossiliferous sites of Europe do not bear any single common taxon, suggesting a high degree of endemism in Early Jurassic plesiosaurs. Nevertheless, these sites are fundamentally

Rab11-dependent Recycling of the Human Ether-a-go-go-related Gene (hERG) Channel*

Science.gov (United States)

Chen, Jeffery; Guo, Jun; Yang, Tonghua; Li, Wentao; Lamothe, Shawn M.; Kang, Yudi; Szendrey, John A.; Zhang, Shetuan

2015-01-01

The human ether-a-go-go-related gene (hERG) encodes the pore-forming subunit of the rapidly activating delayed rectifier potassium channel (IKr). A reduction in the hERG current causes long QT syndrome, which predisposes affected individuals to ventricular arrhythmias and sudden death. We reported previously that hERG channels in the plasma membrane undergo vigorous internalization under low K+ conditions. In the present study, we addressed whether hERG internalization occurs under normal K+ conditions and whether/how internalized channels are recycled back to the plasma membrane. Using patch clamp, Western blot, and confocal imaging analyses, we demonstrated that internalized hERG channels can effectively recycle back to the plasma membrane. Low K+-enhanced hERG internalization is accompanied by an increased rate of hERG recovery in the plasma membrane upon reculture following proteinase K-mediated clearance of cell-surface proteins. The increased recovery rate is not due to enhanced protein synthesis, as hERG mRNA expression was not altered by low K+ exposure, and the increased recovery was observed in the presence of the protein biosynthesis inhibitor cycloheximide. GTPase Rab11, but not Rab4, is involved in the recycling of hERG channels. Interfering with Rab11 function not only delayed hERG recovery in cells after exposure to low K+ medium but also decreased hERG expression and function in cells under normal culture conditions. We concluded that the recycling pathway plays an important role in the homeostasis of plasma membrane-bound hERG channels. PMID:26152716

Origin of intraformational folds in the Jurassic Todilto Limestone, Ambrosia Lake uranium mining district, McKinley and Valencia counties, New Mexico

Science.gov (United States)

Green, M.W.

1982-01-01

The Todilto Limestone of Middle Jurassic age in the Ambrosia Lake uranium mining district of McKinley and Valencia Counties, New Mexico, is the host formation for numerous small- to medium-sized uranium deposits in joints, shear zones, and fractures within small- to large-scale intraformational folds. The folds probably were formed as a result of differential sediment loading when eolian sand dunes of the overlying Summerville Formation of Middle Jurassic age migrated over soft, chemically precipitated, lime muds of the Todilto shortly after their deposition in a regressive, mixed fresh and saline lacustrine or marine environment of deposition. Encroachment of Summerville eolian dunes over soft Todilto lime muds was apparently a local phenomenon and was restricted to postulated beltlike zones which trended radially across the Todilto coastline toward the receding body of water. Intraformational folding is believed to be confined to the pathways of individual eolian dunes or clusters of dunes within the dune belts. During the process of sediment loading by migrating sand dunes, layers of Todilto lime mud were differentially compacted, contorted, and dewatered, producing both small- and large-scale plastic deformation structures, including convolute laminations, mounds, rolls, folds, and small anticlines and synclines. With continued compaction and dewatering, the mud, in localized areas, reached a point of desaturation at which sediment plasticity was lost. Prolonged loading by overlying dune sands thus caused faulting, shearing, fracturing, and jointing of contorted limestone beds. These areas or zones of deformation within the limestone became the preferred sites of epigenetic uranium mineralization because of the induced transmissivity created by sediment rupture. Along most of the prograding Todilto coastline, adjacent to the eolian dune belts, both interdune and coastal sabkha environments dominated during Todilto-Summerville time. Sediments in coastal areas

Jurassic domes in the North Sea - northern North Atlantic region

Energy Technology Data Exchange (ETDEWEB)

Surlyk, F. [Univ. of Copenhagen, Geological Inst., Copenhagen (Denmark)

1996-12-31

The stratigraphic and tectonic evolution of the Jurassic of East Greenland, the Norwegian Shelf and the North Sea is remarkably similar. A major Middle Jurassic unconformity occurs in all three areas. In the North Sea it is commonly termed the `Mid-Cimmerian Unconformity` and is characterized by progressive truncation of the underlying section towards a centre at the triple junction between the Central Graben, Viking Graben and Moray Firth. Strata above the unconformity show a progressive Late Aalenian-Early Kimmeridgian onlap in the same direction. These relations have been interpreted as caused by Early Jurassic uplift and of a major thermal dome in the central North Sea, followed by Medial and Late Jurassic rifting, erosion, deflation and transgression of the dome. The East Greenland unconformity shows progressive truncation of underlying strata from south to north, and Bajocian to Callovian onlap in the same direction. The same pattern seems to be developed on the conjugate Norwegian margin. This suggests the possibility that the three unconformities have similar causes for their development. It is proposed that major rift domes formed in the Central North Sea and in the Greenland-Norway seaway in Early Jurassic times. The domes were eroded and gradually deflated during Medial Jurassic times and were finally submerged by the Late Oxfordian-Kimmeridgian. They were associated with volcanism and rifting which was delayed with respect to dome initiation. Roughly contemperaneous domes were present west of Britain, north of the Porcupine Seabight, and in Scania, southern Sweden, as reflected by development of asymmetrical unconformities showing progressive truncation of underlying strata, onlap of overlying Jurassic strata, and associated intrusive and extrusive volcanism. The domes are related to impingement of the heads of transient mantle plumes at the base of the lithosphere. The associated unconformities are thus of non-eustatic nature. Domal uplift and

Multiple episodes of dolomitization and dolomite recrystallization during shallow burial in Upper Jurassic shelf carbonates: eastern Swabian Alb, southern Germany

Science.gov (United States)

Reinhold, C.

1998-10-01

The Upper Jurassic of the eastern Swabian Alb is composed of oolitic platform sands with associated microbe-siliceous sponge mounds at the platform margins. They are surrounded by argillaceous or calcareous mudstones and marl-limestone alternations, deposited in adjacent marl basins. Partial to complete dolomitization is predominantly confined to the mound facies. Six types of dolomite, as well as one type of ankerite, document a complex diagenetic history during shallow burial with multiple episodes of dolomite formation and recrystallization. The earliest massive matrix dolomitization is Ca-rich, has slightly depleted oxygen isotope values relative to Late Jurassic seawater, and carbon isotopic values in equilibrium with Late Jurassic seawater. This initial massive matrix dolomitization occurred during latest Jurassic to earliest Cretaceous and is related to pressure dissolution during very shallow burial at temperatures of at least 50°C. Hydrologic conditions and mass-balance calculations indicate that burial compaction provided sufficient fluids for dolomitization. Mg is derived from negligibly modified seawater, that was expelled from the adjacent off-reef strata into the mound facies. Position of the mounds along the platform margins controlled the distribution of the shallow-burial dolomite. Covariant trends between textural modification, increasing stoichiometry, partial changes in trace element content (Mn, Fe, Sr) and depletion in stable isotopes as well as distinctive CL pattern illustrate two recrystallization phases of the precursor matrix dolomite during further burial at elevated temperatures. Strong Sr enrichment of the second phase of recrystallized dolomite is ascribed to Sr-rich meteoric waters descending from overlying aragonite-bearing reef limestones or evaporite-bearing peritidal carbonates. Late-stage coarsely crystalline dolomite cements occur as vug and fracture fillings and formed during burial. Ankerite, associated with sulphide and

Hydrocarbon potential of a new Jurassic play, central Tunisia

International Nuclear Information System (INIS)

Beall, A.O.; Law, C.W.

1996-01-01

A largely unrecognized Jurassic Sag Basin has been identified in central Tunisia, proximal to the Permo-Carboniferous flexure delineating the northern boundary of the Saharan platform of north Africa. The northwestern margin of the Sag is delineated by an extensive region of salt-cored anticlines and localized salt diapirs extending north and west. Due to lack of deep drilling, delineation of the Sag is largely based on regional gravity data. Subsidence of the Jurassic Sag Basin is characterized by rapid expansion of Jurassic sediments from 400 m. of tidal flat and shelf carbonate at the western outcrop to over 2000 meters of tidal flat and basinal carbonate and shale within the basin center, a five-fold expansion. Rapid loading of the basin continued into Lower Cretaceous time, marked by lateral flowage of Triassic salt into pronounced structural trends. Published source rock data and interpreted subsurface well data provided the basis for GENEX 1-D hydrocarbon generation and expulsion modeling of the Sag. Middle Jurassic black source shales typically contain Type II and Type III kerogens with T.O.C.'s ranging up to 4 percent. Modeling results indicate that middle Jurassic shales are presently mature for liquid generation within portions of the Sag, with maximum generation taking place during the Tertiary. Potential hydrocarbon generation yields, based on 60 meters of mature source shale, are 20,000 BOE/acre for gas and 75,000 BOE/acre for liquids. Prospects within the region could contain an estimated potential reserve of several T.C.F. or over 1 billion barrels of oil

TMPRSS2-ERG gene fusion status in minute (minimal) prostatic adenocarcinoma.

Science.gov (United States)

Albadine, Roula; Latour, Mathieu; Toubaji, Antoun; Haffner, Michael; Isaacs, William B; A Platz, Elizabeth; Meeker, Alan K; Demarzo, Angelo M; Epstein, Jonathan I; Netto, George J

2009-11-01

Minute prostatic adenocarcinomas are considered to be of insufficient virulence. Given recent suggestions of TMPRSS2-ERG gene fusion association with aggressive prostatic adenocarcinoma, we evaluated the incidence of TMPRSS2-ERG fusion in minute prostatic adenocarcinomas. A total of 45 consecutive prostatectomies with minute adenocarcinoma were used for tissue microarray construction. A total of 63 consecutive non-minimal, Gleason Score 6 tumors, from a separate PSA Era prostatectomy tissue microarray, were used for comparison. FISH was carried out using ERG break-apart probes. Tumors were assessed for fusion by deletion (Edel) or split (Esplit), duplicated fusions and low-level copy number gain in normal ERG gene locus. Minute adenocarcinomas: Fusion was evaluable in 32/45 tumors (71%). Fifteen out of 32 (47%) tumors were positive for fusion. Six (19%) were of the Edel class and 7 (22%) were classified as combined Edel+Esplit. Non-minute adenocarcinomas (pT2): Fusion was identified in 20/30 tumors (67%). Four (13%) were of Edel class and 5 (17%) were combined Edel+Esplit. Duplicated fusions were encountered in 5 (16%) tumors. Non-minute adenocarcinomas (pT3): Fusion was identified in 19/33 (58%). Fusion was due to a deletion in 6 (18%) tumors. Seven tumors (21%) were classified as combined Edel+Esplit. One tumor showed Esplit alone. Duplicated fusions were encountered in 3 (9%) cases. The incidence of duplicated fusions was higher in non-minute adenocarcinomas (13 vs 0%; P=0.03). A trend for higher incidence of low-level copy number gain in normal ERG gene locus without fusion was noted in non-minute adenocarcinomas (10 vs 0%; P=0.07). We found a TMPRSS2-ERG fusion rate of 47% in minute adenocarcinomas. The latter is not significantly different from that of grade matched non-minute adenocarcinomas. The incidence of duplicated fusion was higher in non-minute adenocarcinomas. Our finding of comparable rate of TMPRSS2-ERG fusion in minute adenocarcinomas may argue

Fish faunas from the Late Jurassic (Tithonian) Vaca Muerta Formation of Argentina: One of the most important Jurassic marine ichthyofaunas of Gondwana

Science.gov (United States)

Gouiric-Cavalli, Soledad; Cione, Alberto Luis

2015-11-01

The marine deposits of the Vaca Muerta Formation (Tithonian-Berriasian) houses one of the most diverse Late Jurassic ichthyofaunas of Gondwana. However, most of the specimens remain undescribed. Jurassic fishes have been recovered from several localities at Neuquén Province (i.e., Picún Leufú, Plaza Huincul, Cerro Lotena, Portada Las Lajas, Los Catutos, and Arroyo Covunco) but also from Mendoza Province (i.e., La Valenciana, Los Molles, and Arroyo del Cajón Grande). Presently, the fish fauna of Los Catutos, near Zapala city (Neuquén Province), has yielded the highest number of specimens, which are taxonomically and morphologically diverse. At Los Catutos locality, the Vaca Muerta Formation is represented by the Los Catutos Member, which is considered the only lithographic limestones known in the Southern Hemisphere. Here, we review the Tithonian fish faunas from the Vaca Muerta Formation. During Late Jurassic times, the actual Argentinian territory could have been a morphological diversification center, at least for some actinopterygian groups. The apparently lower species diversity recorded in marine Jurassic ichthyofaunas of Argentina (and some Gondwanan countries) in comparison with Chilean and European fish faunas could be related to the fish paleontological research history in Gondwana and the low number of detailed studies of most of specimens recorded.

Molecular mechanisms underlying the pilsicainide-induced stabilization of hERG proteins in transfected mammalian cells

Directory of Open Access Journals (Sweden)

Takeshi Onohara, MD

2017-06-01

Conclusions: Pilsicainide penetrates the plasma membrane, stabilizes WT-hERG proteins by acting as a chemical chaperone, and enhances WT-hERG channel currents. This mechanism could also be applicable to modulations of certain mutant-hERG proteins.

Faunal turnover of marine tetrapods during the Jurassic-Cretaceous transition.

Science.gov (United States)

Benson, Roger B J; Druckenmiller, Patrick S

2014-02-01

Marine and terrestrial animals show a mosaic of lineage extinctions and diversifications during the Jurassic-Cretaceous transition. However, despite its potential importance in shaping animal evolution, few palaeontological studies have focussed on this interval and the possible climate and biotic drivers of its faunal turnover. In consequence evolutionary patterns in most groups are poorly understood. We use a new, large morphological dataset to examine patterns of lineage diversity and disparity (variety of form) in the marine tetrapod clade Plesiosauria, and compare these patterns with those of other organisms. Although seven plesiosaurian lineages have been hypothesised as crossing the Jurassic-Cretaceous boundary, our most parsimonious topology suggests the number was only three. The robust recovery of a novel group including most Cretaceous plesiosauroids (Xenopsaria, new clade) is instrumental in this result. Substantial plesiosaurian turnover occurred during the Jurassic-Cretaceous boundary interval, including the loss of substantial pliosaurid, and cryptoclidid diversity and disparity, followed by the radiation of Xenopsaria during the Early Cretaceous. Possible physical drivers of this turnover include climatic fluctuations that influenced oceanic productivity and diversity: Late Jurassic climates were characterised by widespread global monsoonal conditions and increased nutrient flux into the opening Atlantic-Tethys, resulting in eutrophication and a highly productive, but taxonomically depauperate, plankton. Latest Jurassic and Early Cretaceous climates were more arid, resulting in oligotrophic ocean conditions and high taxonomic diversity of radiolarians, calcareous nannoplankton and possibly ammonoids. However, the observation of discordant extinction patterns in other marine tetrapod groups such as ichthyosaurs and marine crocodylomorphs suggests that clade-specific factors may have been more important than overarching extrinsic drivers of faunal

Functional recovery after experimental RPE debridement, mfERG studies in a porcine model

DEFF Research Database (Denmark)

Sørensen, Nina Buus; Lassota, Nathan; Kyhn, Maria Voss

2013-01-01

BACKGROUND: The correlation between histologically identified regeneration of retinal pigment epithelium (RPE) and functional outcome measured by multifocal electroretinography (mfERG) following surgical debridement is examined in a porcine model. In humans, visual acuity is reduced in diseases......, and by brushing the Bruch's membrane with a silicone catheter. Immediately following surgery (baseline) and after 2 and 6 weeks respectively, the animals were examined by mfERG, fundus photographs (FPs), fluorescein angiograms (FAs), and histopathology. RESULTS: The mfERG P1 amplitude was decreased 2 weeks (T2....... CONCLUSION: This is the first study to show that the histological regeneration of hypopigmented RPE correlates to a return of the retinal function, measured by mfERG....

Application of electroretinography (ERG) in early drug development for assessing retinal toxicity in rats

Energy Technology Data Exchange (ETDEWEB)

Huang, Wenhu, E-mail: wenhu.huang@pfizer.com; Collette, Walter; Twamley, Michelle; Aguirre, Shirley A.; Sacaan, Aida

2015-12-15

Retinal ocular toxicity is among the leading causes of drug development attrition in the pharmaceutical industry. Electroretinography (ERG) is a non-invasive functional assay used to assess neuro-retinal physiological integrity by measuring the electrical responses. To directly assess the utility of ERG, a series of studies was conducted following intravitreal and/or iv administration of pan-cyclin-dependent kinase inhibitors: AG-012,986 and AG-024,322 in rats. Both compounds have previously shown to induce retinal toxicity. Retinal injury was evaluated by ERG, histopathology and TUNEL staining. Intravitreal injection of AG-012,986 at ≥ 10 μg/eye resulted in decreases (60%) in ERG b-wave and microscopic changes of mild to moderate retinal degeneration, and at 30 μg/eye led to additional ophthalmic findings. Intravenous administration of AG-012,986 daily at ≥ 5 mg/kg resulted in dose-related decreases (25 to 40%) in b-wave and sporadic to intense positive TUNEL staining. Intravitreal injection of AG-024,322 at 30 μg/eye also resulted in decreases (50 to 60%) in b-wave, mild to marked retinal degeneration and mild vitreous debris. These experiments demonstrate that ERG can be used as a sensitive and reliable functional tool to evaluate retinal toxicity induced by test compounds in rats complementing other classical ocular safety measurements. - Highlights: • There were strong correlations of ERG readouts to in vivo ophthalmic exams, TUNEL assay, and histopathology. • ERG appears to be more sensitive and can detect retinal functional changes at a very early stage of pathogenesis. • ERG can be incorporated into routine exploratory toxicity study to identify compound ocular safety issues. • In drug discovery, ERG is a quick, non-invasive, sensitive and reliable tool in retinal toxicity de-risking.

Application of electroretinography (ERG) in early drug development for assessing retinal toxicity in rats

International Nuclear Information System (INIS)

Huang, Wenhu; Collette, Walter; Twamley, Michelle; Aguirre, Shirley A.; Sacaan, Aida

2015-01-01

Retinal ocular toxicity is among the leading causes of drug development attrition in the pharmaceutical industry. Electroretinography (ERG) is a non-invasive functional assay used to assess neuro-retinal physiological integrity by measuring the electrical responses. To directly assess the utility of ERG, a series of studies was conducted following intravitreal and/or iv administration of pan-cyclin-dependent kinase inhibitors: AG-012,986 and AG-024,322 in rats. Both compounds have previously shown to induce retinal toxicity. Retinal injury was evaluated by ERG, histopathology and TUNEL staining. Intravitreal injection of AG-012,986 at ≥ 10 μg/eye resulted in decreases (60%) in ERG b-wave and microscopic changes of mild to moderate retinal degeneration, and at 30 μg/eye led to additional ophthalmic findings. Intravenous administration of AG-012,986 daily at ≥ 5 mg/kg resulted in dose-related decreases (25 to 40%) in b-wave and sporadic to intense positive TUNEL staining. Intravitreal injection of AG-024,322 at 30 μg/eye also resulted in decreases (50 to 60%) in b-wave, mild to marked retinal degeneration and mild vitreous debris. These experiments demonstrate that ERG can be used as a sensitive and reliable functional tool to evaluate retinal toxicity induced by test compounds in rats complementing other classical ocular safety measurements. - Highlights: • There were strong correlations of ERG readouts to in vivo ophthalmic exams, TUNEL assay, and histopathology. • ERG appears to be more sensitive and can detect retinal functional changes at a very early stage of pathogenesis. • ERG can be incorporated into routine exploratory toxicity study to identify compound ocular safety issues. • In drug discovery, ERG is a quick, non-invasive, sensitive and reliable tool in retinal toxicity de-risking.

Endocytosis of hERG Is Clathrin-Independent and Involves Arf6

Science.gov (United States)

Abuarab, Nada; Smith, Andrew J.; Hardy, Matthew E. L.; Elliott, David J. S.; Sivaprasadarao, Asipu

2013-01-01

The hERG potassium channel is critical for repolarisation of the cardiac action potential. Reduced expression of hERG at the plasma membrane, whether caused by hereditary mutations or drugs, results in long QT syndrome and increases the risk of ventricular arrhythmias. Thus, it is of fundamental importance to understand how the density of this channel at the plasma membrane is regulated. We used antibodies to an extracellular native or engineered epitope, in conjunction with immunofluorescence and ELISA, to investigate the mechanism of hERG endocytosis in recombinant cells and validated the findings in rat neonatal cardiac myocytes. The data reveal that this channel undergoes rapid internalisation, which is inhibited by neither dynasore, an inhibitor of dynamin, nor a dominant negative construct of Rab5a, into endosomes that are largely devoid of the transferrin receptor. These results support a clathrin-independent mechanism of endocytosis and exclude involvement of dynamin-dependent caveolin and RhoA mechanisms. In agreement, internalised hERG displayed marked overlap with glycosylphosphatidylinositol-anchored GFP, a clathrin-independent cargo. Endocytosis was significantly affected by cholesterol extraction with methyl-β-cyclodextrin and inhibition of Arf6 function with dominant negative Arf6-T27N-eGFP. Taken together, we conclude that hERG undergoes clathrin-independent endocytosis via a mechanism involving Arf6. PMID:24392021

The first finding of reliable Jurassic radiolarians in the Crimea

Science.gov (United States)

Vishnevskaya, V. S.; Alekseev, A. S.; Zhegallo, E. A.

2017-02-01

Radiolarians of Leugeonidae Yang et Wang, 1990, which represent a morphologically distinctive group of spherical radiolarians of the Spumellaria order, were found for the first time in Crimea and reliably confirm the Jurassic age of the finding. The nodules, which host the Jurassic radiolarians, were collected by A.S. Alekseev in 1983 in the terrigenous sequence of the Lozovskaya tectonic zone. The radiolarian assemblage in the nodules includes Levileugeo ordinarius Yang et Wang, Triactoma jonesi Pessagno, Pseudocrucella aff. prava Blome, Paronella kotura Baumgartner, P. ex gr. mulleri Pessagno, and Praeconocaryomma sp. The Levileugeo genus is easily identified due to its unique hexagonal element, which is typical only of the Jurassic, in particular, Upper Bajocian-Lower Tithonian radiolarians.

Towards a Structural View of Drug Binding to hERG K+ Channels.

Science.gov (United States)

Vandenberg, Jamie I; Perozo, Eduardo; Allen, Toby W

2017-10-01

The human ether-a-go-go-related gene (hERG) K + channel is of great medical and pharmaceutical relevance. Inherited mutations in hERG result in congenital long-QT syndrome which is associated with a markedly increased risk of cardiac arrhythmia and sudden death. hERG K + channels are also remarkably susceptible to block by a wide range of drugs, which in turn can cause drug-induced long-QT syndrome and an increased risk of sudden death. The recent determination of the near-atomic resolution structure of the hERG K + channel, using single-particle cryo-electron microscopy (cryo-EM), provides tremendous insights into how these channels work. It also suggests a way forward in our quest to understand why these channels are so promiscuous with respect to drug binding. Copyright © 2017 Elsevier Ltd. All rights reserved.

Toward establishing a definitive Late-Mid Jurassic (M-series) Geomagnetic Polarity Reversal Time Scale through unraveling the nature of Jurassic Quiet Zone.

Science.gov (United States)

Tominaga, M.; Tivey, M.; Sager, W.

2017-12-01

Two major difficulties have hindered improving the accuracy of the Late-Mid Jurassic geomagnetic polarity time scale: a dearth of reliable high-resolution radiometric dates and the lack of a continuous Jurassic geomagnetic polarity time scale (GPTS) record. We present the latest effort towards establishing a definitive Mid Jurassic to Early Cretaceous (M-series) GPTS model using three high-resolution, multi-level (sea surface [0 km], mid-water [3 km], and near-source [5.2 km]) marine magnetic profiles from a seamount-free corridor adjacent to the Waghenaer Fracture Zone in the western Pacific Jurassic Quiet Zone (JQZ). The profiles show a global coherency in magnetic anomaly correlations between two mid ocean ridge systems (i.e., Japanese and Hawaiian lineations). Their unprecedented high data resolution documents a detailed anomaly character (i.e., amplitudes and wavelengths). We confirm that this magnetic anomaly record shows a coherent anomaly sequence from M29 back in time to M42 with previously suggested from the Japanese lineation in the Pigafetta Basin. Especially noticeable is the M39-M41 Low Amplitude Zone defined in the Pigafetta Bsin, which potentially defines the bounds of JQZ seafloor. We assessed the anomaly source with regard to the crustal architecture, including the effects of Cretaceous volcanism on crustal magnetization and conclude that the anomaly character faithfully represents changes in geomagnetic field intensity and polarity over time and is mostly free of any overprint of the original Jurassic magnetic remanence by later Cretaceous volcanism. We have constructed polarity block models (RMS Japanese M-series sequence. The anomalously high reversal rates during a period of apparent low field intensity suggests a unique period of geomagnetic field behavior in Earth's history.

[ERG diagnosis and differential diagnosis: results of examination over 6 years].

Science.gov (United States)

Stemeyer, G; Stähli, P

1996-05-01

This study reviews the patient material first from the point of view of referral diagnosis. Secondly, we focus on difficulties in selective differential diagnoses. 1501 patients underwent electroretinographic (ERG) testing from 1989 to 1994, amounting to 1815 ERG recordings, including follow-up examinations. The technique applied is full-field, single flash ERG with selective stimulation of the rod- and of the cone-systems. In 3.8% (57 cases) the ERG was performed under general anesthesia in outpatients. Tapetoretinal degenerations, toxic retinal side effects, inflammatory disease and ocular trauma represented, in this order, the major groups of referral diagnoses aside from unclear visual loss. The documentation or the exclusion of tapetoretinal degeneration represented the largest share (57%) of the application of the diagnostic procedure. 171 cases of isolated retinitis pigmentosa (RP) and 33 cases of syndromic RP were identified. Frequent and rare diagnostic entities and their differential diagnoses within this group are discussed. Inevitably, a number of diagnostic decisions remain problematic, in particular at the first examination. These diagnostic difficulties are addressed also and include the differentiation between RP sine pigmento and congenital amaurosis Leber in infants, RP with macular involvement vs. cone-rod degeneration, unilateral RP vs. postinflammatory conditions, and progressive cone dystrophy vs. achromatopsia, cone-rod degeneration or Stargardt's disease. Frequent and meaningful indications for ERG recording and difficult diagnostic decisions arise from this review of a relatively large group of patients. A number of diagnoses can hardly, if not at all be established without ERG testing. These include retinal cause of visual loss in infants, congenital amaurosis Leber, RP sine pigmento, early stages of RP, carrier status in XL RP and in choroideremia, progressive cone dystrophy, toxic retinopathy without fundus changes, retinal involvement

High yield purification of full-length functional hERG K+ channels produced in Saccharomyces cerevisiae

DEFF Research Database (Denmark)

Molbaek, Karen; Scharff-Poulsen, Peter; Hélix-Nielsen, Claus

2015-01-01

knowledge this is the first reported high-yield production and purification of full length, tetrameric and functional hERG. This significant breakthrough will be paramount in obtaining hERG crystal structures, and in establishment of new high-throughput hERG drug safety screening assays....

A Jurassic Shock-Aftershock Earthquake Sequence Recorded by Small Clastic Pipes and Dikes within Dune Cross-Strata, Zion National Park, Utah

Science.gov (United States)

Loope, D. B.; Zlotnik, V. A.; Kettler, R. M.; Pederson, D. T.

2012-12-01

dune lee slope through a pipe, the erupted sand dried and was buried by climbing wind-ripple strata as the large dune continued to advance downwind. The mapped cluster recording eight distinct seismic events lies within thin-laminated sediment that was deposited by wind ripples during 1 m (~ 1 year) of southeastward dune migration. We conclude that the small pipes and dikes of our study sites are products of numerous >MM 5 earthquakes, some of which recurred at intervals of less than 2 months. We interpret one small cluster of pipes and dikes with well-defined upward terminations as a distinct shock-aftershock sequence. Because the largest modern earthquakes can produce surface liquefaction only up to about 175 km from their epicenters, the Jurassic epicenters must have been well within that distance. The tendency of modern plate boundaries to produce high-frequency aftershocks suggests that the epicenter for this Jurassic sequence lay to the southwest, within the plate boundary zone (not within continental rocks to the east). As eolian dunes steadily migrate over interdune surfaces underlain by water-saturated dune cross-strata, the thin, distinct laminae produced by the wind ripples that occupy dune toes can faithfully record high-frequency seismic events.

Early and Middle Jurassic climate changes: implications for palaeoceanography and tectonics

DEFF Research Database (Denmark)

Korte, Christoph; Hesselbo, Stephen; Ullmann, Clemens Vinzenz

2014-01-01

The occurrence of ‘ice ages’ within the overall warm Jurassic Period has been the subject of much discussion and not a little controversy. Recently it has been suggested on the basis of occurrence of glendonites in circum-Arctic basins that cold episodes took place in the Jurassic (Price, 1999; R...... by substantial changes in oceanic current patterns which were initiated by a major tectonic uplift that prevented the transport of heat to Polar Regions....... three pronounced oxygen isotope ‘Ice Age’ cycles, and the subsequent well known Toarcian Oceanic Anoxic ‘supergreenhouse’ Event is followed by very warm seawater temperatures in the late Toarcian. Moreover, a very pronounced and effective cooling occurred during the latest Toarcian and early Aalenian...... (Early-Middle Jurassic Boundary Event) resulted in substantial expansion of Arctic climates to palaeolatitudes as low as 45° and in distinctly cooler seawater temperatures in lower latitude European seas. At least the extensive cooling at the Early-Middle Jurassic Boundary Event was most likely driven...

ERG voltage-gated K+ channels regulate excitability and discharge dynamics of the medial vestibular nucleus neurones.

Science.gov (United States)

Pessia, Mauro; Servettini, Ilenio; Panichi, Roberto; Guasti, Leonardo; Grassi, Silvarosa; Arcangeli, Annarosa; Wanke, Enzo; Pettorossi, Vito Enrico

2008-10-15

The discharge properties of the medial vestibular nucleus neurones (MVNn) critically depend on the activity of several ion channel types. In this study we show, immunohistochemically, that the voltage-gated K(+) channels ERG1A, ERG1B, ERG2 and ERG3 are highly expressed within the vestibular nuclei of P10 and P60 mice. The role played by these channels in the spike-generating mechanisms of the MVNn and in temporal information processing was investigated electrophysiologically from mouse brain slices, in vitro, by analysing the spontaneous discharge and the response to square-, ramp- and sinusoid-like intracellular DC current injections in extracellular and whole-cell patch-clamp studies. We show that more than half of the recorded MVNn were responsive to ERG channel block (WAY-123,398, E4031), displaying an increase in spontaneous activity and discharge irregularity. The response to step and ramp current injection was also modified by ERG block showing a reduction of first spike latency, enhancement of discharge rate and reduction of the slow spike-frequency adaptation process. ERG channels influence the interspike slope without affecting the spike shape. Moreover, in response to sinusoid-like current, ERG channel block caused frequency-dependent gain enhancement and phase-lead shift. Taken together, the data demonstrate that ERG channels control the excitability of MVNn, their discharge regularity and probably their resonance properties.

Determinants of Isoform-Specific Gating Kinetics of hERG1 Channel: Combined Experimental and Simulation Study

Directory of Open Access Journals (Sweden)

Laura L. Perissinotti

2018-04-01

Full Text Available IKr is the rapidly activating component of the delayed rectifier potassium current, the ion current largely responsible for the repolarization of the cardiac action potential. Inherited forms of long QT syndrome (LQTS (Lees-Miller et al., 1997 in humans are linked to functional modifications in the Kv11.1 (hERG ion channel and potentially life threatening arrhythmias. There is little doubt now that hERG-related component of IKr in the heart depends on the tetrameric (homo- or hetero- channels formed by two alternatively processed isoforms of hERG, termed hERG1a and hERG1b. Isoform composition (hERG1a- vs. the b-isoform has recently been reported to alter pharmacologic responses to some hERG blockers and was proposed to be an essential factor pre-disposing patients for drug-induced QT prolongation. Very little is known about the gating and pharmacological properties of two isoforms in heart membranes. For example, how gating mechanisms of the hERG1a channels differ from that of hERG1b is still unknown. The mechanisms by which hERG 1a/1b hetero-tetramers contribute to function in the heart, or what role hERG1b might play in disease are all questions to be answered. Structurally, the two isoforms differ only in the N-terminal region located in the cytoplasm: hERG1b is 340 residues shorter than hERG1a and the initial 36 residues of hERG1b are unique to this isoform. In this study, we combined electrophysiological measurements for HEK cells, kinetics and structural modeling to tease out the individual contributions of each isoform to Action Potential formation and then make predictions about the effects of having various mixture ratios of the two isoforms. By coupling electrophysiological data with computational kinetic modeling, two proposed mechanisms of hERG gating in two homo-tetramers were examined. Sets of data from various experimental stimulation protocols (HEK cells were analyzed simultaneously and fitted to Markov-chain models (M

Data on the construction of a recombinant HEK293 cell line overexpressing hERG potassium channel and examining the presence of hERG mRNA and protein expression

Directory of Open Access Journals (Sweden)

Yi Fan Teah

2017-10-01

Full Text Available The data presented in this article are related to the research article entitled “The effects of deoxyelephantopin on the cardiac delayed rectifier potassium channel current (IKr and human ether-a-go-go-related gene (hERG expression” (Y.F. Teah, M.A. Abduraman, A. Amanah, M.I. Adenan, S.F. Sulaiman, M.L. Tan [1], which the possible hERG blocking properties of deoxyelephantopin were investigated. This article describes the construction of human embryonic kidney 293 (HEK293 cells overexpressing HERG potassium channel and verification of the presence of hERG mRNA and protein expression in this recombinant cell line.

Aeolian sedimentation in the middle buntsandstein in the eifel north-south depression zone: Summary of the variability of sedimentary processes in a buntsandstein erg as a base for evaluation of the mutual relationships between aeolian sand seas and fluvial river systems in the mid-european buntsandstein

Science.gov (United States)

Mader, Detlef

representing residual sand not having been incorporated into larger dunes of the surrounding sand sea. Damp interdune deposits originate by trapping of loose sand that is blown across a moist playa surface as adhesion ripples and warts. The adhesion structures form both in aeolian sheet sand environments with increasing moisture of the substrate and on fluvial channel bars and stream bottoms with declining dampness during subaerial exposure. Wet interdune deposits originate by settling of suspension fines in periodic shallow lakes between the dunes following heavy ephemeral rainfall or forming by rising ground water table, and by aquatic redeposition of aeolian sand due to washout after atmospheric precipitation and alluvial invasion. Deflationary interdune deposits form by winnowing of the sandy matrix from fluvial sheet or bar conglomerates thereby leaving the dispersed gravel as more or less tightly-packed residual veneer on the degradation surface providing bed armour against further aeolian or aquatic erosion. Aeolian deposition is at the top of the Middle Buntsandstein rather rapidly terminated by fluvial inundation of the erg, erosion and partial resedimentation of dune sands and burial of the more or less degraded aeolian bedforms under a carpet of alluvial deposits. At the beginning of the Upper Buntsandstein, a change to semi-arid climate results in stabilization of emerging overbank plains and channels by palaeosol formation and plant growth thus completely inhibiting further accumulation of aeolian sands. The range of modes of origin of dune sands and interdune deposits, the spatial and temporal variability of their accumulation and preservation and the distribution of water-laid intercalations provide a base for independent evaluation of the dynamics of the aeolian system and its controls as well as for comparative assessment of the behaviour of the aeolian environment and the fluvial milieu in a system of intertonguing sand sea and river belt and of the

IL-6 Overexpression in ERG-Positive Prostate Cancer Is Mediated by Prostaglandin Receptor EP2.

Science.gov (United States)

Merz, Constanze; von Mässenhausen, Anne; Queisser, Angela; Vogel, Wenzel; Andrén, Ove; Kirfel, Jutta; Duensing, Stefan; Perner, Sven; Nowak, Michael

2016-04-01

Prostate cancer is the most diagnosed cancer in men and multiple risk factors and genetic alterations have been described. The TMPRSS2-ERG fusion event and the overexpression of the transcription factor ERG are present in approximately 50% of all prostate cancer patients, however, the clinical outcome is still controversial. Prostate tumors produce various soluble factors, including the pleiotropic cytokine IL-6, regulating cellular processes such as proliferation and metastatic segregation. Here, we used prostatectomy samples in a tissue microarray format and analyzed the co-expression and the clinicopathologic data of ERG and IL-6 using immunohistochemical double staining and correlated the read-out with clinicopathologic data. Expression of ERG and IL-6 correlated strongly in prostate tissue samples. Forced expression of ERG in prostate tumor cell lines resulted in significantly increased secretion of IL-6, whereas the down-regulation of ERG decreased IL-6 secretion. By dissecting the underlying mechanism in prostate tumor cell lines we show the ERG-mediated up-regulation of the prostanoid receptors EP2 and EP3. The prostanoid receptor EP2 was overexpressed in human prostate cancer tissue. Furthermore, the proliferation rate and IL-6 secretion in DU145 cells was reduced after treatment with EP2-receptor antagonist. Collectively, our study shows that the expression of ERG in prostate cancer is linked to the expression of IL-6 mediated by the prostanoid receptor EP2. Copyright © 2016 American Society for Investigative Pathology. Published by Elsevier Inc. All rights reserved.

A novel assessment of nefazodone-induced hERG inhibition by electrophysiological and stereochemical method

Energy Technology Data Exchange (ETDEWEB)

Shin, Dae-Seop; Park, Myoung Joo [Drug Discovery Platform Technology Research Group, Korea Research Institute of Chemical Technology, Daejeon (Korea, Republic of); Lee, Hyang-Ae [Korea Institute of Toxicology, Korea Research Institute of Chemical Technology, Daejeon (Korea, Republic of); Lee, Joo Yun; Chung, Hee-Chung; Yoo, Dae Seok; Chae, Chong Hak [Drug Discovery Platform Technology Research Group, Korea Research Institute of Chemical Technology, Daejeon (Korea, Republic of); Park, Sang-Joon [College of Veterinary Medicine, Kyungpook National University, Daegu (Korea, Republic of); Kim, Ki-Suk [Korea Institute of Toxicology, Korea Research Institute of Chemical Technology, Daejeon (Korea, Republic of); Bae, Myung Ae, E-mail: mbae@krict.re.kr [Drug Discovery Platform Technology Research Group, Korea Research Institute of Chemical Technology, Daejeon (Korea, Republic of)

2014-02-01

Nefazodone was used widely as an antidepressant until it was withdrawn from the U.S. market in 2004 due to hepatotoxicity. We have investigated methods to predict various toxic effects of drug candidates to reduce the failure rate of drug discovery. An electrophysiological method was used to assess the cardiotoxicity of drug candidates. Small molecules, including withdrawn drugs, were evaluated using a patch-clamp method to establish a database of hERG inhibition. Nefazodone inhibited hERG channel activity in our system. However, nefazodone-induced hERG inhibition indicated only a theoretical risk of cardiotoxicity. Nefazodone inhibited the hERG channel in a concentration-dependent manner with an IC{sub 50} of 45.3 nM in HEK-293 cells. Nefazodone accelerated both the recovery from inactivation and its onset. Nefazodone also accelerated steady-state inactivation, although it did not modify the voltage-dependent character. Alanine mutants of hERG S6 and pore region residues were used to identify the nefazodone-binding site on hERG. The hERG S6 point mutants Y652A and F656A largely abolished the inhibition by nefazodone. The pore region mutant S624A mildly reduced the inhibition by nefazodone but T623A had little effect. A docking study showed that the aromatic rings of nefazodone interact with Y652 and F656 via π–π interactions, while an amine interacted with the S624 residue in the pore region. In conclusion, Y652 and F656 in the S6 domain play critical roles in nefazodone binding. - Highlights: • Nefazodone inhibits hERG channels with an IC{sub 50} of 45.3 nM in HEK-293 cells. • Nefazodone blocks hERG channels by binding to the open channels. • Y652 and F656 are important for binding of nefazodone. • The aromatic rings of nefazodone interact with Y652 and F656 via π–π interactions.

Differential expression of hERG1 channel isoforms reproduces properties of native I(Kr and modulates cardiac action potential characteristics.

Directory of Open Access Journals (Sweden)

Anders Peter Larsen

Full Text Available BACKGROUND: The repolarizing cardiac rapid delayed rectifier current, I(Kr, is composed of ERG1 channels. It has been suggested that two isoforms of the ERG1 protein, ERG1a and ERG1b, both contribute to I(Kr. Marked heterogeneity in the kinetic properties of native I(Kr has been described. We hypothesized that the heterogeneity of native I(Kr can be reproduced by differential expression of ERG1a and ERG1b isoforms. Furthermore, the functional consequences of differential expression of ERG1 isoforms were explored as a potential mechanism underlying native heterogeneity of action potential duration (APD and restitution. METHODOLOGY/PRINCIPAL FINDINGS: The results show that the heterogeneity of native I(Kr can be reproduced in heterologous expression systems by differential expression of ERG1a and ERG1b isoforms. Characterization of the macroscopic kinetics of ERG1 currents demonstrated that these were dependent on the relative abundance of ERG1a and ERG1b. Furthermore, we used a computational model of the ventricular cardiomyocyte to show that both APD and the slope of the restitution curve may be modulated by varying the relative abundance of ERG1a and ERG1b. As the relative abundance of ERG1b was increased, APD was gradually shortened and the slope of the restitution curve was decreased. CONCLUSIONS/SIGNIFICANCE: Our results show that differential expression of ERG1 isoforms may explain regional heterogeneity of I(Kr kinetics. The data demonstrate that subunit dependent changes in channel kinetics are important for the functional properties of ERG1 currents and hence I(Kr. Importantly, our results suggest that regional differences in the relative abundance of ERG1 isoforms may represent a potential mechanism underlying the heterogeneity of both APD and APD restitution observed in mammalian hearts.

Stereoselective inhibition of the hERG1 potassium channel

Directory of Open Access Journals (Sweden)

Liliana eSintra Grilo

2010-11-01

Full Text Available A growing number of drugs have been shown to prolong cardiac repolarization, predisposing individuals to life-threatening ventricular arrhythmias known as Torsades de Pointes. Most of these drugs are known to interfere with the human ether à-gogo related gene 1 (hERG1 channel, whose current is one of the main determinants of action potential duration. Prolonged repolarization is reflected by lengthening of the QT interval of the electrocardiogram, as seen in the suitably named drug-induced long QT syndrome. Chirality (presence of an asymmetric atom is a common feature of marketed drugs, which can therefore exist in at least two enantiomers with distinct three-dimensional structures and possibly distinct biological fates. Both the pharmacokinetic and pharmacodynamic properties can differ between enantiomers, as well as also between individuals who take the drug due to metabolic polymorphisms. Despite the large number of reports about drugs reducing the hERG1 current, potential stereoselective contributions have only been scarcely investigated. In this review, we present a non-exhaustive list of clinically important molecules which display chiral toxicity that may be related to hERG1-blocking properties. We particularly focus on methadone cardiotoxicity, which illustrates the importance of the stereoselective effect of drug chirality as well as individual variations resulting from pharmacogenetics. Furthermore, it seems likely that, during drug development, consideration of chirality in lead optimization and systematic assessment of the hERG1 current block with all enantiomers could contribute to the reduction of the risk of drug-induced LQTS.

A new basal sauropod dinosaur from the middle Jurassic of Niger and the early evolution of sauropoda.

Directory of Open Access Journals (Sweden)

Kristian Remes

2009-09-01

Full Text Available The early evolution of sauropod dinosaurs is poorly understood because of a highly incomplete fossil record. New discoveries of Early and Middle Jurassic sauropods have a great potential to lead to a better understanding of early sauropod evolution and to reevaluate the patterns of sauropod diversification.A new sauropod from the Middle Jurassic of Niger, Spinophorosaurus nigerensis n. gen. et sp., is the most complete basal sauropod currently known. The taxon shares many anatomical characters with Middle Jurassic East Asian sauropods, while it is strongly dissimilar to Lower and Middle Jurassic South American and Indian forms. A possible explanation for this pattern is a separation of Laurasian and South Gondwanan Middle Jurassic sauropod faunas by geographic barriers. Integration of phylogenetic analyses and paleogeographic data reveals congruence between early sauropod evolution and hypotheses about Jurassic paleoclimate and phytogeography.Spinophorosaurus demonstrates that many putatively derived characters of Middle Jurassic East Asian sauropods are plesiomorphic for eusauropods, while South Gondwanan eusauropods may represent a specialized line. The anatomy of Spinophorosaurus indicates that key innovations in Jurassic sauropod evolution might have taken place in North Africa, an area close to the equator with summer-wet climate at that time. Jurassic climatic zones and phytogeography possibly controlled early sauropod diversification.

The Jurassic of Denmark and Greenland: key elements in the reconstruction of the North Atlantic Jurassic rift system

Directory of Open Access Journals (Sweden)

Surlyk, Finn

2003-10-01

Full Text Available The Jurassic succession of Denmark is largely confined to the subsurface with the exception of exposures on the island of Bornholm in the Baltic Sea. In East Greenland, in contrast, the Jurassic is extensively exposed. Comparison of basin evolution in the two regions, which now occur on two separate plates, thus relies on highly different datasets. It is possible nevertheless to construct an integrated picture allowing testing of hypotheses concerning basin evolution, regional uplift, onset and climax of rifting, relative versus eustatic sea-level changes and sequence stratigraphic subdivision and correlation. On a smaller scale, it is possible to compare the signatures of sequence stratigraphic surfaces as seen on well logs, in cores and at outcrop and of sequences recognised and defined on the basis of very different data types. Breakdown of the successions into tectonostratigraphic megasequences highlights the high degree of similarity in overall basin evolution and tectonic style. An important difference, however, lies in the timing. Major events such as late Early - Middle Jurassic uplift, followed by onset of rifting, basin reorganisation and rift climax were delayed in East Greenland relative to the Danish region. This has important implications both for regional reconstructions of the rift system and for the understanding and testing of classical sequence stratigraphic concepts involving eustatic versus tectonic controls of basin evolution and stratigraphy.

The Oldest Jurassic Dinosaur: A Basal Neotheropod from the Hettangian of Great Britain.

Science.gov (United States)

Martill, David M; Vidovic, Steven U; Howells, Cindy; Nudds, John R

2016-01-01

Approximately 40% of a skeleton including cranial and postcranial remains representing a new genus and species of basal neotheropod dinosaur is described. It was collected from fallen blocks from a sea cliff that exposes Late Triassic and Early Jurassic marine and quasi marine strata on the south Wales coast near the city of Cardiff. Matrix comparisons indicate that the specimen is from the lithological Jurassic part of the sequence, below the first occurrence of the index ammonite Psiloceras planorbis and above the last occurrence of the Rhaetian conodont Chirodella verecunda. Associated fauna of echinoderms and bivalves indicate that the specimen had drifted out to sea, presumably from the nearby Welsh Massif and associated islands (St David's Archipelago). Its occurrence close to the base of the Blue Lias Formation (Lower Jurassic, Hettangian) makes it the oldest known Jurassic dinosaur and it represents the first dinosaur skeleton from the Jurassic of Wales. A cladistic analysis indicates basal neotheropodan affinities, but the specimen retains plesiomorphic characters which it shares with Tawa and Daemonosaurus.

Advance in ERG Analysis: From Peak Time and Amplitude to Frequency, Power, and Energy

Directory of Open Access Journals (Sweden)

Mathieu Gauvin

2014-01-01

Full Text Available Purpose. To compare time domain (TD: peak time and amplitude analysis of the human photopic electroretinogram (ERG with measures obtained in the frequency domain (Fourier analysis: FA and in the time-frequency domain (continuous (CWT and discrete (DWT wavelet transforms. Methods. Normal ERGs n=40 were analyzed using traditional peak time and amplitude measurements of the a- and b-waves in the TD and descriptors extracted from FA, CWT, and DWT. Selected descriptors were also compared in their ability to monitor the long-term consequences of disease process. Results. Each method extracted relevant information but had distinct limitations (i.e., temporal and frequency resolutions. The DWT offered the best compromise by allowing us to extract more relevant descriptors of the ERG signal at the cost of lesser temporal and frequency resolutions. Follow-ups of disease progression were more prolonged with the DWT (max 29 years compared to 13 with TD. Conclusions. Standardized time domain analysis of retinal function should be complemented with advanced DWT descriptors of the ERG. This method should allow more sensitive/specific quantifications of ERG responses, facilitate follow-up of disease progression, and identify diagnostically significant changes of ERG waveforms that are not resolved when the analysis is only limited to time domain measurements.

TMPRSS2-ERG gene fusion is not associated with outcome in patients treated by prostatectomy

Science.gov (United States)

Gopalan, Anuradha; Leversha, Margaret A.; Satagopan, Jaya M.; Zhou, Qin; Al-Ahmadie, Hikmat A.; Fine, Samson W.; Eastham, James A.; Scardino, Peter T.; Scher, Howard I.; Tickoo, Satish K.; Reuter, Victor E.; Gerald, William L.

2009-01-01

A significant number of prostate cancers have been shown to have recurrent chromosomal rearrangements resulting in the fusion of the androgen regulated TMPRSS2 promoter to a member of the ETS transcription factor family, most commonly ERG. This results in ERG overexpression which may have a direct causal role in prostate tumorigenesis or progression. However, the clinical significance of the rearrangement is unclear and, in particular, relationship to outcome has been inconsistent in recent reports. We analyzed TMPRSS2-ERG gene rearrangement status by fluorescence in situ hybridization (FISH) in 521 cases of clinically localized surgically treated prostate cancer with 95 months median follow-up and also in 40 unmatched metastases. 42% of primary tumors and 40% of metastases had rearrangements. 11% had copy number increase (CNI) of the TMPRRS2-ERG region. Rearrangement alone was associated with lower grade, but not with stage, biochemical recurrence, metastases or death. CNI with and without rearrangement was associated with high grade and advanced stage. Further, a subgroup of cancers with CNI and rearrangement by deletion, with two or more copies of the deleted locus, tended to be more clinically aggressive. DNA index assessment revealed that the majority of tumors with CNI of TMPRSS2-ERG had generalized aneuploidy/ tetraploidy in contrast to tumors without TMPRSS2-ERG CNI, which were predominantly diploid. We therefore conclude that translocation of TMPRSS2-ERG is not associated with outcome and the aggressive clinical features associated with CNI of chromosome 21 reflect generalized aneuploidy and are not due to CNI specifically of rearranged TMPRSS2-ERG. PMID:19190343

Chronological study of the pre-jurassic basement rocks of southern Patagonia

International Nuclear Information System (INIS)

Pankhurst, R.J; Rapela, C.W; Loske, W.P; Fanning, C.M

2001-01-01

Southern Patagonia east of the Andes was the site of extensive rhyolite volcanism during the Jurassic rifting of Gondwana and subsequent shallow marine basin formation during the Cretaceous. Thus exposures of pre-Jurassic basement are extremely sparse. Nevertheless, extraction of the maximum amount of information from these scattered outcrops of granite and metamorphic rocks is crucial to assessment of the Palaeozoic and earliest Mesozoic history and crustal structure of the Pacific margin of the supercontinent. In particular, the identification and possible correlation of early terrane accretion on this margin depends on comparison of pre-Jurassic igneous and metamorphic events with adjacent areas. This is a preliminary report on work now in progress to this end (au)

ERG review of salt constitutive law, salt stress determinations, and salt corrosion and modeling studies

International Nuclear Information System (INIS)

Balon, J.E.

1986-03-01

The Engineering Review Group (ERG) was established by the Office of Nuclear Waste Isolation (ONWI) to help evaluate engineering-related issues in the US Department of Energy's nuclear waste repository program. The August 1983 meeting of the ERG reviewed a RE/SPEC technical report containing a review of eight constitutive laws that have been proposed to model the creep of salt over the ranges of stress and temperature anticipated in a nuclear repository. This report documents the ERG's comments and recommendations on this subject and the ONWI responses to the specific points raised by the ERG

High potency inhibition of hERG potassium channels by the sodium–calcium exchange inhibitor KB-R7943

Science.gov (United States)

Cheng, Hongwei; Zhang, Yihong; Du, Chunyun; Dempsey, Christopher E; Hancox, Jules C

2012-01-01

BACKGROUND AND PURPOSE KB-R7943 is an isothiourea derivative that is used widely as a pharmacological inhibitor of sodium–calcium exchange (NCX) in experiments on cardiac and other tissue types. This study investigated KB-R7943 inhibition of hERG (human ether-à-go-go-related gene) K+ channels that underpin the cardiac rapid delayed rectifier potassium current, IKr. EXPERIMENTAL APPROACH Whole-cell patch-clamp measurements were made of hERG current (IhERG) carried by wild-type or mutant hERG channels and of native rabbit ventricular IKr. Docking simulations utilized a hERG homology model built on a MthK-based template. KEY RESULTS KB-R7943 inhibited both IhERG and native IKr rapidly on membrane depolarization with IC50 values of ∼89 and ∼120 nM, respectively, for current tails at −40 mV following depolarizing voltage commands to +20 mV. Marked IhERG inhibition also occurred under ventricular action potential voltage clamp. IhERG inhibition by KB-R7943 exhibited both time- and voltage-dependence but showed no preference for inactivated over activated channels. Results of alanine mutagenesis and docking simulations indicate that KB-R7943 can bind to a pocket formed of the side chains of aromatic residues Y652 and F656, with the compound's nitrobenzyl group orientated towards the cytoplasmic side of the channel pore. The structurally related NCX inhibitor SN-6 also inhibited IhERG, but with a markedly reduced potency. CONCLUSIONS AND IMPLICATIONS KB-R7943 inhibits IhERG/IKr with a potency that exceeds that reported previously for acute cardiac NCX inhibition. Our results also support the feasibility of benzyloxyphenyl-containing NCX inhibitors with reduced potential, in comparison with KB-R7943, to inhibit hERG. PMID:21950687

AN EARLY JURASSIC SAUROPOD TOOTH FROM PATAGONIA (CAÑADÓN ASFALTO FORMATION: IMPLICATIONS FOR SAUROPOD DIVERSITY

Directory of Open Access Journals (Sweden)

Carballido, José L

2017-12-01

Full Text Available Eusauropods were a group of herbivorous dinosaurs that evolved during the Early Jurassic and dominated the terrestrial ecosystems throughout the Jurassic and Cretaceous. A peak of diversity is represented by the Late Jurassic, when most of the lineages of the derived clade, Neosauropoda, are represented. Different lineages of eusauropods differ in several morphological aspects, including a great diversity in gathering strategies, inferred by their dentition morphology and wear facets. Here we describe a new tooth morphotype that can be well differentiated from any other tooth recovered from the Cañadón Asfalto Formation (Lower Jurassic-Middle-Jurassic. Therefore this new tooth morphology increase the evidence of a high diversity of sauropods during that time as well as providing evidence of advanced characters in the dentition of some Early Jurassic sauropods (e.g., subcylindrical and narrow crowns with single apical wear facet.

ERG promotes the maintenance of hematopoietic stem cells by restricting their differentiation

DEFF Research Database (Denmark)

Knudsen, Kasper Jermiin; Rehn, Matilda Carolina; Hasemann, Marie Sigurd

2015-01-01

The balance between self-renewal and differentiation is crucial for the maintenance of hematopoietic stem cells (HSCs). Whereas numerous gene regulatory factors have been shown to control HSC self-renewal or drive their differentiation, we have relatively few insights into transcription factors...... and functional HSCs. Molecularly, we could demonstrate that ERG, in addition to promoting the expression of HSC self-renewal genes, also represses a group of MYC targets, thereby explaining why Erg loss closely mimics Myc overexpression. Consistently, the BET domain inhibitor CPI-203, known to repress Myc...... expression, confers a partial phenotypic rescue. In summary, ERG plays a critical role in coordinating the balance between self-renewal and differentiation of HSCs....

ERG [Engineering Review Group] review of the SRP [Salt Repository Project] salt irradiation effects program: Technical report

International Nuclear Information System (INIS)

Clark, D.E.

1986-11-01

The Engineering Review Group (ERG) was established by the Office of Nuclear Waste Isolation (ONWI) to help evaluate engineering-related issues in the US Department of Energy's nuclear waste repository program. The August 1985 meeting of the ERG reviewed the Salt Repository Project (SRP) salt irradiation effects program. This report documents the ERG's comments and recommendations on these subjects and the ONWI response to the specific points raised by the ERG

An ERG channel inhibitor from the scorpion Buthus eupeus

DEFF Research Database (Denmark)

Korolkova, Y.V.; Kozlov, S.A.; Lipkin, A.V.

2001-01-01

and the three mutants partly inhibited the native M-like current in NG108-15 at 100 nm. The effect of the recombinant BeKm-1 on different K(+) channels was also studied. BeKm-1 inhibited hERG1 channels with an IC(50) of 3.3 nm, but had no effect at 100 nm on hEAG, hSK1, rSK2, hIK, hBK, KCNQ1/KCNE1, KCNQ2/KCNQ3......, KCNQ4 channels, and minimal effect on rELK1. Thus, BeKm-1 was shown to be a novel specific blocker of hERG1 potassium channels....

Exotic Members of Southern Alaska's Jurassic Arc

Science.gov (United States)

Todd, E.; Jones, J. V., III; Karl, S. M.; Box, S.; Haeussler, P. J.

2017-12-01

The Jurassic Talkeetna arc and contemporaneous plutonic rocks of the Alaska-Aleutian Range batholith (ARB) are key components of the Peninsular terrane of southern Alaska. The Talkeetna arc, considered to be a type example of an intra-oceanic arc, was progressively accreted to northwestern North America in the Jurassic to Late Cretaceous, together with associated components of the Wrangellia Composite terrane. Older Paleozoic and Mesozoic rock successions closely associated with the ARB suggest that at least part of the Peninsular terrane might be an overlap succession built on pre-existing crust, possibly correlative with the Wrangellia terrane to the east. However, the relationship between the Talkeetna arc, ARB, and any pre-existing crust remains incompletely understood. Field investigations focused on the petrogenesis of the ARB near Lake Clark National Park show that Jurassic to Late Cretaceous plutonic rocks commonly host a diverse range of mineralogically distinct xenolith inclusions, ranging in size from several cm to hundreds of meters. The modal fraction of these inclusions ranges from 50% in some outcrops. They are generally mafic in composition and, with few exceptions, are more mafic than host plutonic rocks, although they are observed as both igneous (e.g., gabbro cumulate, diorite porphyry) and metamorphic types (e.g., amphibolite, gneiss and quartzite). Inclusion shapes range from angular to rounded with sharp to diffuse boundaries and, in some instances, are found as planar, compositionally distinct bands or screens containing high-temperature ductile shear fabrics. Other planar bands are more segmented, consistent with lower-temperature brittle behavior. Comparison of age, geochemical fractionation trends, and isotope systematics between the inclusions and host plutons provides a critical test of whether they are co-genetic with host plutons. Where they are related, mafic inclusions provide clues about magmatic evolution and fractionation history

Transcription factor ERG and joint and articular cartilage formation during mouse limb and spine skeletogenesis.

Science.gov (United States)

Iwamoto, Masahiro; Tamamura, Yoshihiro; Koyama, Eiki; Komori, Toshihisa; Takeshita, Nobuo; Williams, Julie A; Nakamura, Takashi; Enomoto-Iwamoto, Motomi; Pacifici, Maurizio

2007-05-01

Articular cartilage and synovial joints are critical for skeletal function, but the mechanisms regulating their development are largely unknown. In previous studies we found that the ets transcription factor ERG and its alternatively-spliced variant C-1-1 have roles in joint formation in chick. Here, we extended our studies to mouse. We found that ERG is also expressed in developing mouse limb joints. To test regulation of ERG expression, beads coated with the joint master regulator protein GDF-5 were implanted close to incipient joints in mouse limb explants; this led to rapid and strong ectopic ERG expression. We cloned and characterized several mammalian ERG variants and expressed a human C-1-1 counterpart (hERG3Delta81) throughout the cartilaginous skeleton of transgenic mice, using Col2a1 gene promoter/enhancer sequences. The skeletal phenotype was severe and neonatal lethal, and the transgenic mice were smaller than wild type littermates and their skeletons were largely cartilaginous. Limb long bone anlagen were entirely composed of chondrocytes actively expressing collagen IX and aggrecan as well as articular markers such as tenascin-C. Typical growth plates were absent and there was very low expression of maturation and hypertrophy markers, including Indian hedgehog, collagen X and MMP-13. The results suggest that ERG is part of molecular mechanisms leading chondrocytes into a permanent developmental path and become joint forming cells, and may do so by acting downstream of GDF-5.

Influence green sand system by core sand additions

Directory of Open Access Journals (Sweden)

N. Špirutová

2012-01-01

Full Text Available Today, about two thirds of iron alloys casting (especially for graphitizing alloys of iron are produced into green sand systems with usually organically bonded cores. Separation of core sands from the green sand mixture is very difficult, after pouring. The core sand concentration increase due to circulation of green sand mixture in a closed circulation system. Furthermore in some foundries, core sands have been adding to green sand systems as a replacement for new sands. The goal of this contribution is: “How the green sand systems are influenced by core sands?”This effect is considered by determination of selected technological properties and degree of green sand system re-bonding. From the studies, which have been published yet, there is not consistent opinion on influence of core sand dilution on green sand system properties. In order to simulation of the effect of core sands on the technological properties of green sands, there were applied the most common used technologies of cores production, which are based on bonding with phenolic resin. Core sand concentration added to green sand system, was up to 50 %. Influence of core sand dilution on basic properties of green sand systems was determined by evaluation of basic industrial properties: moisture, green compression strength and splitting strength, wet tensile strength, mixture stability against staling and physical-chemistry properties (pH, conductivity, and loss of ignition. Ratio of active betonite by Methylene blue test was also determined.

Jurassic sedimentary evolution of southern Junggar Basin: Implication for palaeoclimate changes in northern Xinjiang Uygur Autonomous Region, China

Directory of Open Access Journals (Sweden)

Shun-Li Li

2014-04-01

Full Text Available Junggar Basin, located in northern Xinjiang, presents continuous and multikilometer-thick strata of the Jurassic deposits. The Jurassic was entirely terrestrial fluvial and lacustrine deltaic sedimentation. Eight outcrop sections across the Jurassic strata were measured at a resolution of meters in southern Junggar Basin. Controlling factors of sedimentary evolution and palaeoclimate changes in Junggar Basin during the Jurassic were discussed based on lithology, fossils and tectonic setting. In the Early to Middle Jurassic, the warm and wide Tethys Sea generated a strong monsoonal circulation over the central Asian continent, and provided adequate moisture for Junggar Basin. Coal-bearing strata of the Badaowan, Sangonghe, and Xishanyao Formations were developed under warm and humid palaeoclimate in Junggar Basin. In the late Middle Jurassic, Junggar Basin was in a semi-humid and semi-arid environment due to global warming event. Stratigraphy in the upper part of the Middle Jurassic with less plant fossils became multicolor or reddish from dark color sediments. During the Late Jurassic, collision of Lhasa and Qiangtang Block obstructed monsoon from the Tethys Sea. A major change in climate from semi-humid and semi-arid to arid conditions took place, and reddish strata of the Upper Jurassic were developed across Junggar Basin.

Structural implications of hERG K+ channel block by a high-affinity minimally structured blocker

Science.gov (United States)

Helliwell, Matthew V.; Zhang, Yihong; El Harchi, Aziza; Du, Chunyun; Hancox, Jules C.; Dempsey, Christopher E.

2018-01-01

Cardiac potassium channels encoded by human ether-à-go-go–related gene (hERG) are major targets for structurally diverse drugs associated with acquired long QT syndrome. This study characterized hERG channel inhibition by a minimally structured high-affinity hERG inhibitor, Cavalli-2, composed of three phenyl groups linked by polymethylene spacers around a central amino group, chosen to probe the spatial arrangement of side chain groups in the high-affinity drug-binding site of the hERG pore. hERG current (IhERG) recorded at physiological temperature from HEK293 cells was inhibited with an IC50 of 35.6 nm with time and voltage dependence characteristic of blockade contingent upon channel gating. Potency of Cavalli-2 action was markedly reduced for attenuated inactivation mutants located near (S620T; 54-fold) and remote from (N588K; 15-fold) the channel pore. The S6 Y652A and F656A mutations decreased inhibitory potency 17- and 75-fold, respectively, whereas T623A and S624A at the base of the selectivity filter also decreased potency (16- and 7-fold, respectively). The S5 helix F557L mutation decreased potency 10-fold, and both F557L and Y652A mutations eliminated voltage dependence of inhibition. Computational docking using the recent cryo-EM structure of an open channel hERG construct could only partially recapitulate experimental data, and the high dependence of Cavalli-2 block on Phe-656 is not readily explainable in that structure. A small clockwise rotation of the inner (S6) helix of the hERG pore from its configuration in the cryo-EM structure may be required to optimize Phe-656 side chain orientations compatible with high-affinity block. PMID:29545312

Increased adipogenesis in cultured embryonic chondrocytes and in adult bone marrow of dominant negative Erg transgenic mice.

Directory of Open Access Journals (Sweden)

Sébastien Flajollet

Full Text Available In monolayer culture, primary articular chondrocytes have an intrinsic tendency to lose their phenotype during expansion. The molecular events underlying this chondrocyte dedifferentiation are still largely unknown. Several transcription factors are important for chondrocyte differentiation. The Ets transcription factor family may be involved in skeletal development. One family member, the Erg gene, is mainly expressed during cartilage formation. To further investigate the potential role of Erg in the maintenance of the chondrocyte phenotype, we isolated and cultured chondrocytes from the rib cartilage of embryos of transgenic mice that express a dominant negative form of Erg (DN-Erg during cartilage formation. DN-Erg expression in chondrocytes cultured for up to 20 days did not affect the early dedifferentiation usually observed in cultured chondrocytes. However, lipid droplets accumulated in DN-Erg chondrocytes, suggesting adipocyte emergence. Transcriptomic analysis using a DNA microarray, validated by quantitative RT-PCR, revealed strong differential gene expression, with a decrease in chondrogenesis-related markers and an increase in adipogenesis-related gene expression in cultured DN-Erg chondrocytes. These results indicate that Erg is involved in either maintaining the chondrogenic phenotype in vitro or in cell fate orientation. Along with the in vitro studies, we compared adipocyte presence in wild-type and transgenic mice skeletons. Histological investigations revealed an increase in the number of adipocytes in the bone marrow of adult DN-Erg mice even though no adipocytes were detected in embryonic cartilage or bone. These findings suggest that the Ets transcription factor family may contribute to the homeostatic balance in skeleton cell plasticity.

Resetting the evolution of marine reptiles at the Triassic-Jurassic boundary.

Science.gov (United States)

Thorne, Philippa M; Ruta, Marcello; Benton, Michael J

2011-05-17

Ichthyosaurs were important marine predators in the Early Jurassic, and an abundant and diverse component of Mesozoic marine ecosystems. Despite their ecological importance, however, the Early Jurassic species represent a reduced remnant of their former significance in the Triassic. Ichthyosaurs passed through an evolutionary bottleneck at, or close to, the Triassic-Jurassic boundary, which reduced their diversity to as few as three or four lineages. Diversity bounced back to some extent in the aftermath of the end-Triassic mass extinction, but disparity remained at less than one-tenth of pre-extinction levels, and never recovered. The group remained at low diversity and disparity for its final 100 Myr. The end-Triassic mass extinction had a previously unsuspected profound effect in resetting the evolution of apex marine predators of the Mesozoic.

Early identification of hERG liability in drug discovery programs by automated patch clamp

Directory of Open Access Journals (Sweden)

Timm eDanker

2014-09-01

Full Text Available Blockade of the cardiac ion channel coded by hERG can lead to cardiac arrhythmia, which has become a major concern in drug discovery and development. Automated electrophysiological patch clamp allows assessment of hERG channel effects early in drug development to aid medicinal chemistry programs and has become routine in pharmaceutical companies. However, a number of potential sources of errors in setting up hERG channel assays by automated patch clamp can lead to misinterpretation of data or false effects being reported. This article describes protocols for automated electrophysiology screening of compound effects on the hERG channel current. Protocol details and the translation of criteria known from manual patch clamp experiments to automated patch clamp experiments to achieve good quality data are emphasized. Typical pitfalls and artifacts that may lead to misinterpretation of data are discussed. While this article focuses on hERG channel recordings using the QPatch (Sophion A/S, Copenhagen, Denmark technology, many of the assay and protocol details given in this article can be transferred for setting up different ion channel assays by automated patch clamp and are similar on other planar patch clamp platforms.

[Effects of pressure induced retinal ischemia on ERG in rabbit].

Science.gov (United States)

Song, G; Yang, X; Zhang, Z; Zhang, D

2001-12-01

To observe the effects of pressure induced retinal ischemia on electroretinogram(ERG) in rabbit. Retinal ischemia was induced in rabbits by increasing intraocular pressure at 30 mmHg, 60 mmHg, 90 mmHg, 120 mmHg for 45 minutes, and retinal function was monitored by eletroretinography. There was no difference on ERG before or after the experiment both in 30 mmHg group and control one. In 60 mmHg pressure induced ischemia eyes, the amplitudes of the b-wave and OPs wave reduced significantly. Four hours after reperfusion, they were totally recovered. After an ischemic insult of 90 mmHg or 120 mmHg for 45 minutes, there was no response of ERG. Four hours later, the amplitudes of the b-wave and OPs wave were 66.912 +/- 20.157 and 16.423 +/- 3.965 the former, 38.852 +/- 23.438 and 8.610 +/- 12.090 the latter, respectively. These results suggest that higher intraocular pressure causes more severe retina ischemic damage, and less recovery ability.

TMPRSS2- driven ERG expression in vivo increases self-renewal and maintains expression in a castration resistant subpopulation.

Directory of Open Access Journals (Sweden)

Orla M Casey

Full Text Available Genomic rearrangements commonly occur in many types of cancers and often initiate or alter the progression of disease. Here we describe an in vivo mouse model that recapitulates the most frequent rearrangement in prostate cancer, the fusion of the promoter region of TMPRSS2 with the coding region of the transcription factor, ERG. A recombinant bacterial artificial chromosome including an extended TMPRSS2 promoter driving genomic ERG was constructed and used for transgenesis in mice. TMPRSS2-ERG expression was evaluated in tissue sections and FACS-fractionated prostate cell populations. In addition to the anticipated expression in luminal cells, TMPRSS2-ERG was similarly expressed in the Sca-1(hi/EpCAM(+ basal/progenitor fraction, where expanded numbers of clonogenic self-renewing progenitors were found, as assayed by in vitro sphere formation. These clonogenic cells increased intrinsic self renewal in subsequent generations. In addition, ERG dependent self-renewal and invasion in vitro was demonstrated in prostate cell lines derived from the model. Clinical studies have suggested that the TMPRSS2-ERG translocation occurs early in prostate cancer development. In the model described here, the presence of the TMPRSS2-ERG fusion alone was not transforming but synergized with heterozygous Pten deletion to promote PIN. Taken together, these data suggest that one function of TMPRSS2-ERG is the expansion of self-renewing cells, which may serve as targets for subsequent mutations. Primary prostate epithelial cells demonstrated increased post transcriptional turnover of ERG compared to the TMPRSS2-ERG positive VCaP cell line, originally isolated from a prostate cancer metastasis. Finally, we determined that TMPRSS2-ERG expression occurred in both castration-sensitive and resistant prostate epithelial subpopulations, suggesting the existence of androgen-independent mechanisms of TMPRSS2 expression in prostate epithelium.

First diagnostic marine reptile remains from the Aalenian (Middle Jurassic): a new ichthyosaur from southwestern Germany.

Science.gov (United States)

Maxwell, Erin E; Fernández, Marta S; Schoch, Rainer R

2012-01-01

The Middle Jurassic was a critical time in the evolutionary history of ichthyosaurs. During this time interval, the diverse, well-studied faunas of the Lower Jurassic were entirely replaced by ophthalmosaurids, a new group that arose sometime prior to the Aalenian-Bajocian boundary and by the latest middle Jurassic comprised the only surviving group of ichthyosaurs. Thus, the Middle Jurassic Aalenian-Bathonian interval (176-165 million years ago) comprises the time frame during which ophthalmosaurids not only originated but also achieved taxonomic dominance. However, diagnostic ichthyosaur remains have been described previously from only a single locality from this interval, from the Bajocian of Argentina. In this paper, we describe a new species of ichthyosaur based on a partial articulated specimen from the Middle Jurassic of southwestern Germany. This specimen was recovered from the Opalinuston Formation (early Aalenian) and is referable to Stenopterygius aaleniensis sp. nov. reflecting features of the skull and forefin. The genus Stenopterygius is diverse and abundant in the Lower Jurassic of Europe, but its presence has not previously been confirmed in younger (Middle Jurassic) rocks from the northern hemisphere. This specimen represents the only diagnostic ichthyosaur remains reported from the Aalenian. It bears numerous similarities in size and in morphology to the Lower Jurassic species of the genus Stenopterygius and provides additional evidence that the major ecological changes hypothesized to have occurred at the end of the Toarcian took place sometime after this point and most likely did not occur suddenly. There is currently no evidence for the presence of ophthalmosaurids in the northern hemisphere during the Aalenian-Bathonian interval.

Sequence stratigraphy, sedimentary systems and petroleum plays in a low-accommodation basin: Middle to upper members of the Lower Jurassic Sangonghe Formation, Central Junggar Basin, Northwestern China

Science.gov (United States)

Feng, Youliang; Jiang, Shu; Wang, Chunfang

2015-06-01

The Lower Jurassic Junggar Basin is a low-accommodation basin in northwestern China. Because of low subsidence rates and a warm, wet climate, deposits of the Central subbasin of the Junggar Basin formed from fluvial, deltaic, shallow lake facies. Sequence stratigraphy and sedimentary systems of the Lower Jurassic members of the Sangonghe Formation (J1s) were evaluated by observing cores, interpreting wireline logs and examining seismic profiles. Two third-order sequences were recognized in the strata. The distribution of the sedimentary systems in the systems tracts shows that tectonic movement, paleorelief, paleoclimate and changes in lake level controlled the architecture of individual sequences. During the development of the lowstand systems tract (LST), the intense structural movement of the basin resulted in a significant fall in the water level in the lake, accompanied by rapid accommodation decrease. Braided rivers and their deltaic systems were also developed in the Central Junggar Basin. Sediments carried by braided rivers were deposited on upward slopes of the paleorelief, and braid-delta fronts were deposited on downward slopes. During the transgressive systems tract (TST), the tectonic movement of the basin was quiescent and the climate was warm and humid. Lake levels rose and accommodation increased quickly, shoal lines moved landward, and shore- to shallow-lake deposits, sublacustrine fans and deep-lake facies were deposited in shallow- to deep-lake environments. During the highstand systems tract (HST), the accommodation no longer increased but sediment supply continued, far exceeding accommodation. HST deposits slowly formed in shallow-lake to meandering river delta-front environments. Relatively low rates of structural subsidence and low accommodation resulted in coarse-grained successions that were fining upward. Deposits were controlled by structural movement and paleorelief within the LST to TST deposits in the Central subbasin. Fine- to medium

Children with complete or incomplete congenital stationary night blindness: ophthalmological findings, standard ERGs and ON-OFF ERGs for differentiation between types

Directory of Open Access Journals (Sweden)

Maja Šuštar

2012-06-01

Conclusion: Distinct electrophysiological characteristics can be used to differentiate between complete and incomplete CSNB. Moreover, ONOFF ERGs are important for precise localization of the retinal bipolar cell dysfunction, and these can also be reliably recorded in children.

Pharmacologic Approach to Defective Protein Trafficking in the E637K-hERG Mutant with PD-118057 and Thapsigargin.

Directory of Open Access Journals (Sweden)

Haiyan Mao

Full Text Available Treatment of LQT2 is inadequate. Many drugs which can pharmacologically rescue defective protein trafficking in LQT2 also result in potent blockade of HERG current, negating their therapeutic benefit. It is reported that PD-118057 and thapsigargin can rescue LQT2 without hERG channel blockade, but the precise mechanism of action is unknown. Furthermore, the effect of PD-118057 and thapsigargin on the dominant negative E637K-hERG mutant has not been previously investigated.IN THIS STUDY, WE INVESTIGATED: (a the effect of PD-118057 and thapsigargin on the current amplitudes of WT-hERG and WT/E637K-hERG channels; (b the effect of PD-118057 and thapsigargin on the biophysical properties of WT-hERG and WT/E637K-hERG channels; (c whether drug treatment can rescue channel processing and trafficking defects of the WT/E637K-hERG mutant.The whole-cell Patch-clamp technique was used to assess the effect of PD-118057 and thapsigargin on the electrophysiological characteristics of the rapidly activating delayed rectifier K(+ current (Ikr of the hERG protein channel. Western blot was done to investigate pharmacological rescue on hERG protein channel function.In our study, PD-118057 was shown to significantly enhance both the maximum current amplitude and tail current amplitude, but did not alter the gating and kinetic properties of the WT-hERG channel, with the exception of accelerating steady-state inactivation. Additionally, thapsigargin shows a similar result as PD-118057 for the WT-hERG channel, but with the exception of attenuating steady-state inactivation. However, for the WT/E637K-hERG channel, PD-118057 had no effect on either the current or on the gating and kinetic properties. Furthermore, thapsigargin treatment did not alter the current or the gating and kinetic properties of the WT/E637K-hERG channel, with the exception of opening at more positive voltages.Our findings illustrate that neither PD-118057 nor thapsigargin play a role in correcting

Structure and Function of the Splice Variants of TMPRSS2-ERG, a Prevalent Genomic Alteration in Prostate Cancer

Science.gov (United States)

2012-09-01

expression in prostate cancer (4). Lower or no ERG expression in a subset of aggressive tumors with TMPRSS2-ERG fusion may reflect attenuation of androgen...Services University of the Health Sciences, Bethesda MD 20814, USA 2. Cancer Vaccine Development Laboratory, Department of Surgery, United...negative for ERG. The ERG MAb did not show cross reactivity to FLI-1 in LNCaP cells infected with a FLI-1 adenovirus expression vector (Fig 1A

First diagnostic marine reptile remains from the Aalenian (Middle Jurassic: a new ichthyosaur from southwestern Germany.

Directory of Open Access Journals (Sweden)

Erin E Maxwell

Full Text Available BACKGROUND: The Middle Jurassic was a critical time in the evolutionary history of ichthyosaurs. During this time interval, the diverse, well-studied faunas of the Lower Jurassic were entirely replaced by ophthalmosaurids, a new group that arose sometime prior to the Aalenian-Bajocian boundary and by the latest middle Jurassic comprised the only surviving group of ichthyosaurs. Thus, the Middle Jurassic Aalenian-Bathonian interval (176-165 million years ago comprises the time frame during which ophthalmosaurids not only originated but also achieved taxonomic dominance. However, diagnostic ichthyosaur remains have been described previously from only a single locality from this interval, from the Bajocian of Argentina. METHODOLOGY/PRINCIPAL FINDINGS: In this paper, we describe a new species of ichthyosaur based on a partial articulated specimen from the Middle Jurassic of southwestern Germany. This specimen was recovered from the Opalinuston Formation (early Aalenian and is referable to Stenopterygius aaleniensis sp. nov. reflecting features of the skull and forefin. The genus Stenopterygius is diverse and abundant in the Lower Jurassic of Europe, but its presence has not previously been confirmed in younger (Middle Jurassic rocks from the northern hemisphere. CONCLUSIONS/SIGNIFICANCE: This specimen represents the only diagnostic ichthyosaur remains reported from the Aalenian. It bears numerous similarities in size and in morphology to the Lower Jurassic species of the genus Stenopterygius and provides additional evidence that the major ecological changes hypothesized to have occurred at the end of the Toarcian took place sometime after this point and most likely did not occur suddenly. There is currently no evidence for the presence of ophthalmosaurids in the northern hemisphere during the Aalenian-Bathonian interval.

Mechanisms of IhERG/IKr Modulation by α1-Adrenoceptors in HEK293 Cells and Cardiac Myocytes

Directory of Open Access Journals (Sweden)

Janire Urrutia

2016-12-01

Full Text Available Background: The rapid delayed rectifier K+ current (IKr, carried by the hERG protein, is one of the main repolarising currents in the human heart and a reduction of this current increases the risk of ventricular fibrillation. α1-adrenoceptors (α1-AR activation reduces IKr but, despite the clear relationship between an increase in the sympathetic tone and arrhythmias, the mechanisms underlying the α1-AR regulation of the hERG channel are controversial. Thus, we aimed to investigate the mechanisms by which α1-AR stimulation regulates IKr. Methods: α1-adrenoceptors, hERG channels, auxiliary subunits minK and MIRP1, the non PIP2-interacting mutant D-hERG (with a deletion of the 883-894 amino acids in the C-terminal and the non PKC-phosphorylable mutant N-terminal truncated-hERG (NTK-hERG were transfected in HEK293 cells. Cell membranes were extracted by centrifugation and the different proteins were visualized by Western blot. Potassium currents were recorded by the patch-clamp technique. IKr was recorded in isolated feline cardiac myocytes. Results: Activation of the α1-AR reduces the amplitude of IhERG and IKr through a positive shift in the activation half voltage, which reduces the channel availability at physiological membrane potentials. The intracellular pathway connecting the α1-AR to the hERG channel in HEK293 cells includes activation of the Gαq protein, PLC activation and PIP2 hydrolysis, activation of PKC and direct phosphorylation of the hERG channel N-terminal. The PKC-mediated IKr channel phosphorylation and subsequent IKr reduction after α1-AR stimulation was corroborated in feline cardiac myocytes. Conclusions: These findings clarify the link between sympathetic nervous system hyperactivity and IKr reduction, one of the best characterized causes of torsades de pointes and ventricular fibrillation.

Palinspastic reconstruction and geological evolution of Jurassic basins in Mongolia and neighboring China

Directory of Open Access Journals (Sweden)

Wu Genyao

2013-07-01

Full Text Available The important event in Jurassic tectonics in Mongolia was the subduction and closure of the Mongolia-Okhotsk ocean; correspondingly, basin evolution can be divided into two main stages, related to the orogeny and collapse of the orogenic belt, respectively. The developing of Early–Middle Jurassic basins to the north of the ocean resulted from back-arc extension. The fossil sutures, from the China–SE Asia sub-continent to the south of the ocean, were rejuvenated by subduction-related orogeny; in addition, the Yanshanian intra-continental movement occurred. Three Early–Middle Jurassic molasse basins were developed by movement in Inner Mongolia, all of which stretched westwards (or northwards into Mongolia; therefore, the molasse basins in eastern and southern Mongolia had the same geometric and kinematic features as the basins in the Inner Mongolia. Owing to the collapse of the Mongolia-Okhotsk orogenic belt, a group of rift basins developed during the Late Jurassic. In eastern Mongolia, the NE orientated extensional basins were controlled by the neogenic NE-structure. The contemporary basins in southern Mongolia and the neighboring areas in China were constrained by remobilization (inherited activation of the latitudinal or ENE-directional basement structures. Three stages can be recognized in the evolution of the Early–Middle Jurassic basins after reversal; the basins also experienced four episodes of reformation.

Episodic Jurassic to Lower Cretaceous intraplate compression in Central Patagonia during Gondwana breakup

Science.gov (United States)

Navarrete, César; Gianni, Guido; Echaurren, Andrés; Kingler, Federico Lince; Folguera, Andrés

2016-12-01

From Lower Jurassic to Lower Cretaceous, several intraplate compression events affected discrete sectors of Central Patagonia, under a general context of crustal extension associated with Gondwana breakup. This was demonstrated by means of 2D and 3D seismic and borehole data, which show partial inversion of Lower and Middle Jurassic extensional structures of the Chubut and Cañadón Asfalto basins, during the earliest stages of breakup. A comparison with surrounding areas in Patagonia, where similar Jurassic intraplate compression was described, allowed the discrimination of three discrete pulses of subtle compression (C1: ∼188-185 Ma; C2: ∼170-163; C3: ∼157-136? Ma). Interestingly, episodic intraplate compressional events are closely followed by high flux magmatic events linked to the westward expansion of the Karoo-Ferrar thermal anomaly, which impacted on the lithosphere of southwest Gondwana in Lower Jurassic. In addition, we determined the approximate direction of the main compressive strain (σ1) compatible with other Jurassic intraplate belts of South America. These observations led us to propose a linkage between a thermo mechanically weakened continental crust due to LIPs activity, changes in plate motions and ridge-push forces generated by the opening of the Weddell Sea, in order to explain intraplate shortening, interrupted while Karoo LIPs magmatic invigoration took place.

The Jurassic-early Cretaceous Ilo batholith of southern coastal Peru: geology, geochronology and geochemistry

Science.gov (United States)

Boekhout, Flora; Sempere, Thierry; Spikings, Richard; Schaltegger, Urs

2010-05-01

The Ilo batholith (17°00 - 18°30 S) crops out in an area of about 20 by 100 km, along the coast of southern Peru. This batholith is emplaced into the ‘Chocolate‘ Formation of late Permian to middle Jurassic age, which consists of more than 1000 m of basaltic and andesitic lavas, with interbedded volcanic agglomerates and breccias. The Ilo Batholith is considered to be a rarely exposed fragment of the Jurassic arc in Peru. Our aim is to reconstruct the magmatic evolution of this batholith, and place it within the context of long-lasting magma genesis along the active Andean margin since the Paleozoic. Sampling for dating and geochemical analyses was carried out along several cross sections through the batholith that were exposed by post-intrusion eastward tilting of 20-30°. Sparse previous work postulates early to middle Jurassic and partially early Cretaceous emplacement, on the basis of conventional K/Ar and 40Ar/39Ar dating methods in the Ilo area. Twenty new U-Pb zircon ages (LA-ICP-MS and CA-ID-TIMS) accompanied by geochemical data suggests the Ilo batholith formed via the amalgamation of middle Jurassic and early Cretaceous, subduction-related plutons. Preliminary Hf isotope studies reveal a primitive mantle source for middle Jurassic intrusions. Additional Sr, Nd and Hf isotope analyses are planned to further resolve the source regions of different pulses of plutonic activity. We strongly suggest that batholith emplacement was at least partly coeval with the emplacement of the late Permian to middle Jurassic Chocolate Formation, which was deposited in an extensional tectonic regime. Our age results and geochemical signature fit into the scheme of episodic emplacement of huge amounts of subduction related magmatism that is observed throughout the whole Andean event, particularly during the middle Jurassic onset of the first Andean cycle (southern Peru, northern Chile and southern Argentina). Although the exact geodynamic setting remains to be precisely

A DNA methylation microarray-based study identifies ERG as a gene commonly methylated in prostate cancer.

Science.gov (United States)

Schwartzman, Jacob; Mongoue-Tchokote, Solange; Gibbs, Angela; Gao, Lina; Corless, Christopher L; Jin, Jennifer; Zarour, Luai; Higano, Celestia; True, Lawrence D; Vessella, Robert L; Wilmot, Beth; Bottomly, Daniel; McWeeney, Shannon K; Bova, G Steven; Partin, Alan W; Mori, Motomi; Alumkal, Joshi

2011-10-01

DNA methylation of promoter regions is a common event in prostate cancer, one of the most common cancers in men worldwide. Because prior reports demonstrating that DNA methylation is important in prostate cancer studied a limited number of genes, we systematically quantified the DNA methylation status of 1505 CpG dinucleotides for 807 genes in 78 paraffin-embedded prostate cancer samples and three normal prostate samples. The ERG gene, commonly repressed in prostate cells in the absence of an oncogenic fusion to the TMPRSS2 gene, was one of the most commonly methylated genes, occurring in 74% of prostate cancer specimens. In an independent group of patient samples, we confirmed that ERG DNA methylation was common, occurring in 57% of specimens, and cancer-specific. The ERG promoter is marked by repressive chromatin marks mediated by polycomb proteins in both normal prostate cells and prostate cancer cells, which may explain ERG's predisposition to DNA methylation and the fact that tumors with ERG DNA methylation were more methylated, in general. These results demonstrate that bead arrays offer a high-throughput method to discover novel genes with promoter DNA methylation such as ERG, whose measurement may improve our ability to more accurately detect prostate cancer.

Geospace exploration project: Arase (ERG)

Science.gov (United States)

Miyoshi, Y.; Kasaba, Y.; Shinohara, I.; Takashima, T.; Asamura, K.; Matsumoto, H.; Higashio, N.; Mitani, T.; Kasahara, S.; Yokota, S.; Wang, S.; Kazama, Y.; Kasahara, Y.; Yagitani, S.; Matsuoka, A.; Kojima, H.; Katoh, Y.; Shiokawa, K.; Seki, K.; Fujimoto, M.; Ono, T.; ERG project Group

2017-06-01

The ERG (Exploration of energization and Radiation in Geospace) is Japanese geospace exploration project. The project focuses on relativistic electron acceleration mechanism of the outer belt and dynamics of space storms in the context of the cross-energy coupling via wave-particle interactions. The project consists of the satellite observation team, the ground-based network observation team, and integrated-data analysis/simulation team. The satellite was launched on December 20 2016 and has been nicknamed, “Arase”. This paper describes overview of the project and future plan for observations.

Concurrent nuclear ERG and MYC protein overexpression defines a subset of locally advanced prostate cancer: Potential opportunities for synergistic targeted therapeutics.

Science.gov (United States)

Udager, Aaron M; DeMarzo, Angelo M; Shi, Yang; Hicks, Jessica L; Cao, Xuhong; Siddiqui, Javed; Jiang, Hui; Chinnaiyan, Arul M; Mehra, Rohit

2016-06-01

Recurrent ERG gene fusions, the most common genetic alterations in prostate cancer, drive overexpression of the nuclear transcription factor ERG, and are early clonal events in prostate cancer progression. The nuclear transcription factor MYC is also frequently overexpressed in prostate cancer and may play a role in tumor initiation and/or progression. The relationship between nuclear ERG and MYC protein overexpression in prostate cancer, as well as the clinicopathologic characteristics and prognosis of ERG-positive/MYC high tumors, is not well understood. Immunohistochemistry (IHC) for ERG and MYC was performed on formalin-fixed, paraffin-embedded tissue from prostate cancer tissue microarrays (TMAs), and nuclear staining was scored semi-quantitatively (IHC product score range = 0-300). Correlation between nuclear ERG and MYC protein expression and association with clinicopathologic parameters and biochemical recurrence after radical prostatectomy was assessed. 29.1% of all tumor nodules showed concurrent nuclear ERG and MYC protein overexpression (i.e., ERG-positive/MYC high), including 35.0% of secondary nodules. Overall, there was weak positive correlation between ERG and MYC expression across all tumor nodules (rpb  = 0.149, P = 0.045), although this correlation was strongest in secondary nodules (rpb  = 0.520, P = 0.019). In radical prostatectomy specimens, ERG-positive/MYC high tumors were positively associated with the presence of extraprostatic extension (EPE), relative to all other ERG/MYC expression subgroups, however, there was no significant association between concurrent nuclear ERG and MYC protein overexpression and time to biochemical recurrence. Concurrent nuclear ERG and MYC protein overexpression is common in prostate cancer and defines a subset of locally advanced tumors. Recent data indicates that BET bromodomain proteins regulate ERG gene fusion and MYC gene expression in prostate cancer, suggesting possible synergistic

Developing a PTEN-ERG Signature to Improve Molecular Risk Stratification in Prostate Cancer

Science.gov (United States)

2017-10-01

performed exploratory data analysis on all clinically annotated prostate cancer datasets available from the public domain and through the collaboration...with GenomeDX. We used statistical summaries and data visualizations techniques (e.g., principal component analysis , hierarchical clustering) to...associated with PTEN loss on genetically homogeneous ERG-positive and ERG- negative backgrounds. Timeline (Months) Major Task 2: Perform CAGE analysis

Overcoming hERG affinity in the discovery of maraviroc; a CCR5 antagonist for the treatment of HIV.

Science.gov (United States)

Price, David A; Armour, Duncan; de Groot, Marcel; Leishman, Derek; Napier, Carolyn; Perros, Manos; Stammen, Blanda L; Wood, Anthony

2008-01-01

Avoiding cardiac liability associated with blockade of hERG (human ether a go-go) is key for successful drug discovery and development. This paper describes the work undertaken in the discovery of a potent CCR5 antagonist, maraviroc 34, for the treatment of HIV. In particular the use of a pharmacophore model of the hERG channel and a high throughput binding assay for the hERG channel are described that were critical to elucidate SAR to overcome hERG liabilities. The key SAR involves the introduction of polar substituents into regions of the molecule where it is postulated to undergo hydrophobic interactions with the ion channel. Within the CCR5 project there appeared to be no strong correlation between hERG affinity and physiochemical parameters such as pKa or lipophilicity. It is believed that chemists could apply these same strategies early in drug discovery to remove hERG interactions associated with lead compounds while retaining potency at the primary target.

Differential expression of hERG1 channel isoforms reproduces properties of native I(Kr) and modulates cardiac action potential characteristics

DEFF Research Database (Denmark)

Larsen, Anders Peter; Olesen, Søren-Peter

2010-01-01

The repolarizing cardiac rapid delayed rectifier current, I(Kr), is composed of ERG1 channels. It has been suggested that two isoforms of the ERG1 protein, ERG1a and ERG1b, both contribute to I(Kr). Marked heterogeneity in the kinetic properties of native I(Kr) has been described. We hypothesized...

TMPRSS2-ERG gene fusions are infrequent in prostatic ductal adenocarcinomas.

Science.gov (United States)

Lotan, Tamara L; Toubaji, Antoun; Albadine, Roula; Latour, Mathieu; Herawi, Mehsati; Meeker, Alan K; DeMarzo, Angelo M; Platz, Elizabeth A; Epstein, Jonathan I; Netto, George J

2009-03-01

Ductal adenocarcinoma of the prostate is an unusual subtype that may be associated with a more aggressive clinical course, and is less responsive to conventional therapies than the more common prostatic acinar adenocarcinoma. However, given its frequent association with an acinar component at prostatectomy, some have challenged the concept of prostatic ductal adenocarcinoma as a distinct clinicopathologic entity. We studied the occurrence of the TMPRSS2-ERG gene fusion, in 40 surgically resected ductal adenocarcinoma cases, and in their associated acinar component using fluorescence in situ hybridization. A group of 38 'pure' acinar adenocarcinoma cases matched with the ductal adenocarcinoma group for pathological grade and stage was studied as a control. Compared with the matched acinar adenocarcinoma cases, the TMPRSS2-ERG gene fusion was significantly less frequently observed in ductal adenocarcinoma (45 vs 11% of cases, P=0.002, Fisher's exact test). Here, of the ductal adenocarcinoma cases with the gene fusion, 75% were fused through deletion, and the remaining case was fused through translocation. The TMPRSS2-ERG gene fusion was also rare in the acinar component of mixed ductal-acinar tumors when compared with the pure acinar adenocarcinoma controls (5 vs 45%, P=0.001, Fisher's exact test). In 95% of the ductal adenocarcinoma cases in which a concurrent acinar component was analyzed, there was concordance for presence/absence of the TMPRSS2-ERG gene fusion between the different histologic subtypes. In the control group of pure acinar adenocarcinoma cases, 59% were fused through deletion and 41% were fused through translocation. The presence of the TMPRSS2-ERG gene fusion in some cases of prostatic ductal adenocarcinoma supports the concept that ductal adenocarcinoma and acinar adenocarcinoma may be related genetically. However, the significantly lower rate of the gene fusion in pure ductal adenocarcinoma cases underscores the fact that genetic and biologic

Late Jurassic low latitude of Central Iran: paleogeographic and tectonic implications

Science.gov (United States)

Mattei, Massimo; Muttoni, Giovanni; Cifelli, Francesca

2014-05-01

The individual blocks forming present-day Central Iran are now comprised between the Zagros Neo-Tethys suture to the south and the Alborz Palaeo-Tethys suture to the north. At the end of the Palaeozoic, the Iranian blocks rifted away from the northern margin of Gondwana as consequence of the opening of the Neo-Tethys, and collided with Eurasia during the Late Triassic, giving place to the Eo-Cimmerian orogeny. From then on, the Iranian block(s) should have maintained European affinity. Modern generations of apparent polar wander paths (APWPs) show the occurrence in North American and African coordinates of a major and rapid shift in pole position (=plate shift) during the Middle-Late Jurassic. This so-called monster polar shift is predicted also for Eurasia from the North Atlantic plate circuit, but Jurassic data from this continent are scanty and problematic. Here, we present paleomagnetic data from the Kimmeridgian-Tithonian (Upper Jurassic) Garedu Formation of Iran. Paleomagnetic component directions of primary (pre-folding) age indicate a paleolatitude of deposition of 10°N ± 5° that is in excellent agreement with the latitude drop predicted for Iran from APWPs incorporating the Jurassic monster polar shift. We show that paleolatitudes calculated from these APWPs, used in conjunction with simple zonal climate belts, better explain the overall stratigraphic evolution of Iran during the Mesozoic.

Role of the pH in state-dependent blockade of hERG currents

Science.gov (United States)

Wang, Yibo; Guo, Jiqing; Perissinotti, Laura L.; Lees-Miller, James; Teng, Guoqi; Durdagi, Serdar; Duff, Henry J.; Noskov, Sergei Yu.

2016-10-01

Mutations that reduce inactivation of the voltage-gated Kv11.1 potassium channel (hERG) reduce binding for a number of blockers. State specific block of the inactivated state of hERG block may increase risks of drug-induced Torsade de pointes. In this study, molecular simulations of dofetilide binding to the previously developed and experimentally validated models of the hERG channel in open and open-inactivated states were combined with voltage-clamp experiments to unravel the mechanism(s) of state-dependent blockade. The computations of the free energy profiles associated with the drug block to its binding pocket in the intra-cavitary site display startling differences in the open and open-inactivated states of the channel. It was also found that drug ionization may play a crucial role in preferential targeting to the open-inactivated state of the pore domain. pH-dependent hERG blockade by dofetilie was studied with patch-clamp recordings. The results show that low pH increases the extent and speed of drug-induced block. Both experimental and computational findings indicate that binding to the open-inactivated state is of key importance to our understanding of the dofetilide’s mode of action.

A re-examination of paleomagnetic results from NA Jurassic sedimentary rocks: Additional evidence for proposed Jurassic MUTO?

Science.gov (United States)

Housen, B. A.

2015-12-01

Kent and Irving, 2010; and Kent et al, 2015 propose a monster shift in the position of Jurassic (160 to 145 Ma) paleopoles for North America- defined by results from igneous rocks. This monster shift is likely an unrecognized true polar wander occurrence. Although subject to inclination error, results from sedimentary rocks from North America, if corrected for these effects, can be used to supplement the available data for this time period. Steiner (2003) reported results from 48 stratigraphic horizons sampled from the Callovian Summerville Fm, from NE New Mexico. A recalculated mean of these results yields a mean direction of D = 332, I = 39, n=48, k = 15, α95 = 5.4°. These data were analyzed for possible inclination error-although the dataset is small, the E-I results yielded a corrected I = 53. This yields a corrected paleopole for NA at ~165 Ma located at 67° N and 168° E.Paleomagnetic results from the Black Hills- Kilanowski (2002) for the Callovian Hulett Mbr of the Sundance Fm, and Gregiore (2001) the Oxfordian-Tithonian Morrison Fm (Gregiore, 2001) have previously been interpreted to represent Eocene-aged remagnetizations- due to the nearly exact coincidence between the in-situ pole positions of these Jurassic units with the Eocene pole for NA. Both of the tilt-corrected results for these units have high latitude poles (Sundance Fm: 79° N, 146° E; Morrison Fm: 89° N, 165° E). An E-I analysis of these data will be presented- using a provisional inclination error of 10°, corrected paleopoles are: (Sundance Fm: 76° N, 220° E; Morrison Fm: 77° N, 266° E). The Black Hills 165 Ma (Sundance Fm) and 145 Ma (Morrison Fm) poles, provisionally corrected for 10° inclination error- occur fairly close to the NA APWP proposed by Kent et al, 2015- using an updated set of results from kimberlites- the agreement between the Sundance Fm and the Triple-B (158 Ma) pole would be nearly exact with a slightly lesser inclination error. The Summerville Fm- which is

A radiolabeled peptide ligand of the hERG channel, [125I]-BeKm-1

DEFF Research Database (Denmark)

Angelo, Kamilla; Korolkova, Yuliya V; Grunnet, Morten

2003-01-01

The wild-type scorpion toxin BeKm-1, which selectively blocks human ether-a-go-go related (hERG) channels, was radiolabeled with iodine at tyrosine 11. Both the mono- and di-iodinated derivatives were found to be biologically active. In electrophysiological patch-clamp recordings mono-[127I]-BeKm-1...... had a concentration of half-maximal inhibition (IC50 value) of 27 nM, while wild-type BeKm-1 inhibited hERG channels with an IC50 value of 7 nM. Mono-[125I]-BeKm-1 was found to bind in a concentration-dependent manner and with picomolar affinity to hERG channel protein in purified membrane vesicles...... of [125I]-BeKm-1 to the hERG channel to an IC50 of 7 nM. In autoradiographic studies on rat hearts, binding of [125I]-BeKm-1 was dose-dependent and could partially be displaced by the addition of excess amounts of non-radioactive BeKm-1. The density of the radioactive signal was equally distributed...

RhoJ is an endothelial cell-restricted Rho GTPase that mediates vascular morphogenesis and is regulated by the transcription factor ERG

NARCIS (Netherlands)

Yuan, Lei; Sacharidou, Anastasia; Stratman, Amber N.; Le Bras, Alexandra; Zwiers, Peter J.; Spokes, Katherine; Bhasin, Manoj; Shih, Shou-ching; Nagy, Janice A.; Molema, Grietje; Aird, William C.; Davis, George E.; Oettgen, Peter

2011-01-01

ERG is a member of the ETS transcription factor family that is highly enriched in endothelial cells (ECs). To further define the role of ERG in regulating EC function, we evaluated the effect of ERG knockdown on EC lumen formation in 3D collagen matrices. Blockade of ERG using siRNA completely

ERG review of ''draft test plan for in situ testing in an exploratory shaft in salt - March 1985''

International Nuclear Information System (INIS)

Byrne, R.J.

1986-08-01

The Engineering Review Group (ERG) was established by the Office of Nuclear Waste Isolation (ONWI) to help evaluate engineering-related issues in the US Department of Energy's nuclear waste repository program. The May 1985 meeting of the ERG reviewed the proposed program which constitutes part of the overall effort to determine site suitability, provide data for repository design and performance assessment, and prepare licensing documentation for radioactive waste disposal in salt. This report documents the ERG's comments and recommendations on these subjects and the ONWI response, prepared by Golder Associates, Inc., to the specific points raised by the ERG

Targeting TMPRSS2 ERG in Prostate Cancer

Science.gov (United States)

2016-09-01

kinome library, using physiologic cell based assays of ERG activity. We made lentivirus expressing multiple shRNAs targeting each candidate 9...MDV3100 reverses the effect of R1881 (compare columns 2 and 3). Interestingly, PKCi inhibited a subset of androgen induced genes ( column 4...expenditures Nothing to report. Significant changes in use or care of human subjects, vertebrate animals, biohazards, and/or select agents Nothing to

Modeling of the hERG K+ Channel Blockage Using Online Chemical Database and Modeling Environment (OCHEM).

Science.gov (United States)

Li, Xiao; Zhang, Yuan; Li, Huanhuan; Zhao, Yong

2017-12-01

Human ether-a-go-go related gene (hERG) K+ channel plays an important role in cardiac action potential. Blockage of hERG channel may result in long QT syndrome (LQTS), even cause sudden cardiac death. Many drugs have been withdrawn from the market because of the serious hERG-related cardiotoxicity. Therefore, it is quite essential to estimate the chemical blockage of hERG in the early stage of drug discovery. In this study, a diverse set of 3721 compounds with hERG inhibition data was assembled from literature. Then, we make full use of the Online Chemical Modeling Environment (OCHEM), which supplies rich machine learning methods and descriptor sets, to build a series of classification models for hERG blockage. We also generated two consensus models based on the top-performing individual models. The consensus models performed much better than the individual models both on 5-fold cross validation and external validation. Especially, consensus model II yielded the prediction accuracy of 89.5 % and MCC of 0.670 on external validation. This result indicated that the predictive power of consensus model II should be stronger than most of the previously reported models. The 17 top-performing individual models and the consensus models and the data sets used for model development are available at https://ochem.eu/article/103592. © 2017 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.

Developing a PTEN-ERG Signature to Improve Molecular Risk Stratification in Prostate Cancer

Science.gov (United States)

2017-10-01

AWARD NUMBER: W81XWH-16-1-0737 TITLE: Developing a PTEN-ERG Signature to Improve Molecular Risk Stratification in Prostate Cancer PRINCIPAL...AND SUBTITLE 5a. CONTRACT NUMBER Developing a PTEN-ERG Signature to Improve Molecular Risk Stratification in Prostate Cancer 5b. GRANT NUMBER W81XWH...that there exist distinctive molecular correlates of PTEN loss in the context of ETS-negative versus ETS-positive human prostate cancers and that

PCA3 Reference Set Application: T2-Erg-Martin Sanda-Emory (2014) — EDRN Public Portal

Science.gov (United States)

We hypothesize that combining T2:erg (T2:erg) fusion and PCA3 detection in urine collected after digital rectal exam can improve the specificity of identifying clinically significant prostate cancer presence over the standard PSA and DRE. To address this hypothesis we propose to validate the performance of the urinary T2:erg in a multiplex model predicting the diagnosis of clinically significant prostate cancer on subsequent prostate biopsy using post-DRE pre biopsy urine specimens from a cohort of 900 men on the EDRN’s PCA3 trial.

ERG Protein Expression in Diagnostic Specimens Is Associated with Increased Risk of Progression During Active Surveillance for Prostate Cancer

DEFF Research Database (Denmark)

Berg, Kasper Drimer; Vainer, Ben; Thomsen, Frederik Birkebæk

2014-01-01

with a ready-to-use kit (anti-ERG, EPR3864). Men were characterised as ERG positive if a minimum of one tumour focus demonstrated ERG expression. OUTCOME MEASUREMENTS AND STATISTICAL ANALYSIS: Overall AS progression was defined as clinical progression: increased clinical tumour category ≥cT2b by digital rectal...

Effects of Tannic Acid, Green Tea and Red Wine on hERG Channels Expressed in HEK293 Cells.

Directory of Open Access Journals (Sweden)

Xi Chu

Full Text Available Tannic acid presents in varying concentrations in plant foods, and in relatively high concentrations in green teas and red wines. Human ether-à-go-go-related gene (hERG channels expressed in multiple tissues (e.g. heart, neurons, smooth muscle and cancer cells, and play important roles in modulating cardiac action potential repolarization and tumor cell biology. The present study investigated the effects of tannic acid, green teas and red wines on hERG currents. The effects of tannic acid, teas and red wines on hERG currents stably transfected in HEK293 cells were studied with a perforated patch clamp technique. In this study, we demonstrated that tannic acid inhibited hERG currents with an IC50 of 3.4 μM and ~100% inhibition at higher concentrations, and significantly shifted the voltage dependent activation to more positive potentials (Δ23.2 mV. Remarkably, a 100-fold dilution of multiple types of tea (green tea, oolong tea and black tea or red wine inhibited hERG currents by ~90%, and significantly shifted the voltage dependent activation to more positive potentials (Δ30.8 mV and Δ26.0 mV, respectively. Green tea Lung Ching and red wine inhibited hERG currents, with IC50 of 0.04% and 0.19%, respectively. The effects of tannic acid, teas and red wine on hERG currents were irreversible. These results suggest tannic acid is a novel hERG channel blocker and consequently provide a new mechanistic evidence for understanding the effects of tannic acid. They also revealed the potential pharmacological basis of tea- and red wine-induced biology activities.

Effects of Tannic Acid, Green Tea and Red Wine on hERG Channels Expressed in HEK293 Cells

Science.gov (United States)

Xu, Bingyuan; Li, Wenya; Lin, Yue; Sun, Xiaorun; Ding, Chunhua; Zhang, Xuan

2015-01-01

Tannic acid presents in varying concentrations in plant foods, and in relatively high concentrations in green teas and red wines. Human ether-à-go-go-related gene (hERG) channels expressed in multiple tissues (e.g. heart, neurons, smooth muscle and cancer cells), and play important roles in modulating cardiac action potential repolarization and tumor cell biology. The present study investigated the effects of tannic acid, green teas and red wines on hERG currents. The effects of tannic acid, teas and red wines on hERG currents stably transfected in HEK293 cells were studied with a perforated patch clamp technique. In this study, we demonstrated that tannic acid inhibited hERG currents with an IC50 of 3.4 μM and ~100% inhibition at higher concentrations, and significantly shifted the voltage dependent activation to more positive potentials (Δ23.2 mV). Remarkably, a 100-fold dilution of multiple types of tea (green tea, oolong tea and black tea) or red wine inhibited hERG currents by ~90%, and significantly shifted the voltage dependent activation to more positive potentials (Δ30.8 mV and Δ26.0 mV, respectively). Green tea Lung Ching and red wine inhibited hERG currents, with IC50 of 0.04% and 0.19%, respectively. The effects of tannic acid, teas and red wine on hERG currents were irreversible. These results suggest tannic acid is a novel hERG channel blocker and consequently provide a new mechanistic evidence for understanding the effects of tannic acid. They also revealed the potential pharmacological basis of tea- and red wine-induced biology activities. PMID:26625122

Assessing the Contribution of the Oscillatory Potentials to the Genesis of the Photopic ERG with the Discrete Wavelet Transform.

Science.gov (United States)

Gauvin, Mathieu; Dorfman, Allison L; Trang, Nataly; Gauthier, Mercedes; Little, John M; Lina, Jean-Marc; Lachapelle, Pierre

2016-01-01

The electroretinogram (ERG) is composed of slow (i.e., a-, b-waves) and fast (i.e., oscillatory potentials: OPs) components. OPs have been shown to be preferably affected in some diseases (such as diabetic retinopathy), while the a- and b-waves remain relatively intact. The purpose of this study was to determine the contribution of OPs to the building of the ERG and to examine whether a signal mostly composed of OPs could also exist. DWT analyses were performed on photopic ERGs (flash intensities: -2.23 to 2.64 log cd·s·m -2 in 21 steps) obtained from normal subjects ( n = 40) and patients ( n = 21) affected with a retinopathy. In controls, the %OP value (i.e., OPs energy/ERG energy) is stimulus- and amplitude-independent (range: 56.6-61.6%; CV = 6.3%). In contrast, the %OPs measured from the ERGs of our patients varied significantly more (range: 35.4%-89.2%; p pathology, some presenting with ERGs that are almost solely composed of OPs. In conclusion, patients may present with a wide range of %OP values. Findings herein also support the hypothesis that, in certain conditions, the photopic ERG can be mostly composed of high-frequency components.

Assessing the Contribution of the Oscillatory Potentials to the Genesis of the Photopic ERG with the Discrete Wavelet Transform

Directory of Open Access Journals (Sweden)

Mathieu Gauvin

2016-01-01

Full Text Available The electroretinogram (ERG is composed of slow (i.e., a-, b-waves and fast (i.e., oscillatory potentials: OPs components. OPs have been shown to be preferably affected in some diseases (such as diabetic retinopathy, while the a- and b-waves remain relatively intact. The purpose of this study was to determine the contribution of OPs to the building of the ERG and to examine whether a signal mostly composed of OPs could also exist. DWT analyses were performed on photopic ERGs (flash intensities: −2.23 to 2.64 log cd·s·m−2 in 21 steps obtained from normal subjects (n=40 and patients (n=21 affected with a retinopathy. In controls, the %OP value (i.e., OPs energy/ERG energy is stimulus- and amplitude-independent (range: 56.6–61.6%; CV = 6.3%. In contrast, the %OPs measured from the ERGs of our patients varied significantly more (range: 35.4%–89.2%; p<0.05 depending on the pathology, some presenting with ERGs that are almost solely composed of OPs. In conclusion, patients may present with a wide range of %OP values. Findings herein also support the hypothesis that, in certain conditions, the photopic ERG can be mostly composed of high-frequency components.

Revised models for hydrocarbon generation, migration and accumulation in Jurassic coal measures of the Turpan basin, NW China

Energy Technology Data Exchange (ETDEWEB)

Li Maowen; Stasiuk, L.D. [Geological Survey of Canada, Calgary, Alberta (Canada); Bao Jianping [Jianghan Petroleum University, Hubei (China); Lin, R. [Petroleum University (Beijing), Changping (China); Yuan Mingsheng [PetroChina Tu-Ha Oilfield Company, Xingjiang (China)

2001-07-01

Whether or not the Lower-Middle Jurassic coal measures in the Turpan basin of NW China have generated commercial quantities of liquid petroleums is a problem of considerable importance that remains contentious as it has not yet been resolved unequivocally. This study provides evidence against the Jurassic humic coals as the only major source for the oils discovered in the Taibei depression of this basin and suggests additional significant contributions from the Upper Permian and Middle-Lower Jurassic lacustrine source rocks. The Carboniferous-Permian marine source rocks may have been important also in limited locations along the major basement faults. Molecular and petrographic data indicate that the majority of the Middle Jurassic strata are currently immature or marginally mature with respect to hydrocarbon generation. Within the major depocenters, the Middle-Lower Jurassic coal-bearing strata of the Baodaowan and Xishanyao formations has reached the conventional oil window (i.e. with vitrinite reflectance >0.7 per cent Ro). Pre-Jurassic (Upper Permian in particular) derived hydrocarbons appear to be widespread in extracts of fractured Jurassic coal and fine-grained rocks. Large differences have been observed in the absolute concentrations of biomarker compounds in rock extracts of various source intervals. Thus, 'coaly' biomarker signatures of the oils most likely resulted from mixing and migration contamination when hydrocarbons derived from mature source rocks migrated up through highly fractured coal seams along deep-seated faults. In addition to conventional exploration targets, revised petroleum generation and accumulation models predict that the focus in the Turpan basin should also include deep structures within the Carboniferous-Permian strata and subtle, low magnitude anticlines and stratigraphic traps within thr Triassic-Jurassic sections. (author)

Environmental Impacts of Sand Exploitation. Analysis of Sand Market

Directory of Open Access Journals (Sweden)

Marius Dan Gavriletea

2017-06-01

Full Text Available Sand is an indispensable natural resource for any society. Despite society’s increasing dependence on sand, there are major challenges that this industry needs to deal with: limited sand resources, illegal mining, and environmental impact of sand mining. The purpose of this paper is twofold: to present an overview of the sand market, highlighting the main trends and actors for production, export and import, and to review the main environmental impacts associated with sand exploitation process. Based on these findings, we recommend different measures to be followed to reduce negative impacts. Sand mining should be done in a way that limits environmental damage during exploitation and restores the land after mining operations are completed.

Stratigraphy and macrofauna of the Lower Jurassic (Toarcian) Marrat Formation, central Saudi Arabia

Science.gov (United States)

El-Sorogy, Abdelbaset S.; Gameil, Mohamed; Youssef, Mohamed; Al-Kahtany, Khaled M.

2017-10-01

The stratigraphy and macrofaunal content of the Lower Jurassic (Toarcian) Marrat Formation was studied at Khashm adh Dhibi, central Saudi Arabia. The studied succession is dominated by limestones and dolomites, with subordinate occurrences of sandstones, siltstones and claystones. The formation is highly fossiliferous with brachiopods, gastropods, bivalves, ammonites and echinoids, particularly the lower and upper members. Twenty nine species are identified, they include 7 species of brachiopods, 8 gastropods, 8 bivalves, 4 ammonites and 2 echinoids. Many of the identified fauna are correlated with Jurassic equivalents in Jordan, Italy, Morocco, Egypt and India. Three gastropod species: Globularia subumbilicata, Ampullospira sp., Purpuroidea peristriata and seven bivalve species: Palaeonucula lateralis, Chlamys (Radulopecten) fibrosa, Eligmus weiri, E.integer, E. asiaticus, Musculus somaliensis and Pholadomya orientalis were recognized for the first time in the Lower Jurassic deposits of Saudi Arabia.

The Tunisian Jurassic aquifer in the North African Sahara aquifer system: information derived from two-dimensional seismic reflection and well logs

Science.gov (United States)

Ben Lasmar, Rafika; Guellala, Rihab; Garrach, Mohamed; Mahroug, Ali; Sarsar Naouali, Benen; Inoubli, Mohamed Hédi

2017-12-01

Southern Tunisia is an arid area where socio-economic activities are dependent on groundwater resources. The presented study aims to better characterize the Jurassic aquifer based on geological and geophysical data, with a view to develop a rational exploitation program. Well logs are used to precisely determine the position and composition of the known Jurassic aquifer layers and to identify others able to produce good quality water. The logs show that limestones, sandstones and dolomites of the Krachoua, Techout and Foum Tataouine formations are the main Jurassic aquifers. Sixty-eight seismic-reflection sections are integrated within this study. The interpolation between the interpreted sections leads to the construction of isochronous isopach maps and geoseismic sections, and their analysis finds that compressive and extensive tectonic deformations have influenced the Jurassic aquifer geometry. The Hercynian orogeny phase manifestation is remarkable in that there are several stratigraphic gaps in the Jurassic sequence. The E-W, NW-SE, and NNW-SSE accidents, reactivated in normal faults since the Permian to Lower Cretaceous epochs, have generated the structures found in the Jurassic series, such as subsided and raised blocks. Their syn-sedimentary activity has controlled the thickness and facies of these series. The Cretaceous, Tortonian and Post-Villafranchian compressions are responsible for the Jurassic-deposits folding in some localities. The highlighted tectonic and sedimentary events have an important impact on the Jurassic aquifer function by favoring the Jurassic aquifer interconnections and their connections with the Triassic and Cretaceous permeable series.

Clonal Evaluation of Prostate Cancer by ERG/SPINK1 Status to Improve Prognosis Prediction

Science.gov (United States)

2017-12-01

19 NIH Exploiting drivers of androgen receptor signaling negative prostate cancer for precision medicine Goal(s): Identify novel potential drivers...AWARD NUMBER: W81XWH-14-1-0466 TITLE: Clonal evaluation of prostate cancer by ERG/SPINK1 status to improve prognosis prediction PRINCIPAL...Sept 2017 4. TITLE AND SUBTITLE 5a. CONTRACT NUMBER Clonal Evaluation of Prostate Cancer by ERG/SPINK1 Status to Improve Prognosis Prediction 5b

Interaction between the cardiac rapidly (IKr) and slowly (IKs) activating delayed rectifier potassium channels revealed by low K+-induced hERG endocytic degradation.

Science.gov (United States)

Guo, Jun; Wang, Tingzhong; Yang, Tonghua; Xu, Jianmin; Li, Wentao; Fridman, Michael D; Fisher, John T; Zhang, Shetuan

2011-10-07

Cardiac repolarization is controlled by the rapidly (I(Kr)) and slowly (I(Ks)) activating delayed rectifier potassium channels. The human ether-a-go-go-related gene (hERG) encodes I(Kr), whereas KCNQ1 and KCNE1 together encode I(Ks). Decreases in I(Kr) or I(Ks) cause long QT syndrome (LQTS), a cardiac disorder with a high risk of sudden death. A reduction in extracellular K(+) concentration ([K(+)](o)) induces LQTS and selectively causes endocytic degradation of mature hERG channels from the plasma membrane. In the present study, we investigated whether I(Ks) compensates for the reduced I(Kr) under low K(+) conditions. Our data show that when hERG and KCNQ1 were expressed separately in human embryonic kidney (HEK) cells, exposure to 0 mM K(+) for 6 h completely eliminated the mature hERG channel expression but had no effect on KCNQ1. When hERG and KCNQ1 were co-expressed, KCNQ1 significantly delayed 0 mM K(+)-induced hERG reduction. Also, hERG degradation led to a significant reduction in KCNQ1 in 0 mM K(+) conditions. An interaction between hERG and KCNQ1 was identified in hERG+KCNQ1-expressing HEK cells. Furthermore, KCNQ1 preferentially co-immunoprecipitated with mature hERG channels that are localized in the plasma membrane. Biophysical and pharmacological analyses indicate that although hERG and KCNQ1 closely interact with each other, they form distinct hERG and KCNQ1 channels. These data extend our understanding of delayed rectifier potassium channel trafficking and regulation, as well as the pathology of LQTS.

Middle to late Jurassic in Poland; Mellem - Oevre jura i Polen

Energy Technology Data Exchange (ETDEWEB)

Poulsen, N.E.; Bojesen-Koefoed, J.; Drewniak, A.; Glowniak, E.; Ineson, J.; Matyja, B.A.; Merta, T.; Wierzbowski, A.

1998-12-01

Results of this project have contributed to the renewed research in the area of the Middle Jurassic ammonite stratigraphy. Upper Jurassic ammonite stratigraphy is a very actively researched field at the Geological Institute of the Warsaw University. The stratigraphical distribution of dinoflagellate cysts within the Upper Bajocian-Bathonian-Lower Callovian has provided a detailed correlation between the Polish Submediterranean Province (northern Tethyan realm) and the Subboreal Province of the North Sea area (chronostratigraphy and dinoflagellate zonation). One of the most interesting results is the improved correlation of the Oxfordian/Kimmeridgean boundary between these two provinces. The source mineral research contributed new data about the oil/gas potential of megafacies in the central Poland. The planned model development of catagenesis of Middle Jurassic clay sediments in relation to salt deposits could not be established from the found low TOC values and very low hydrogen index values between 6 and 141. The organic material can be characterized as kerogen-type III/IV. Kerogen is considered generally immature with regard to oil/gas formation. The detailed study of sponge bioherms in North-Western Poland has resulted in better understanding of the architecture and evolution of these bioherms. (EG)

TMPRSS2-ERG -specific transcriptional modulation is associated with prostate cancer biomarkers and TGF-β signaling

International Nuclear Information System (INIS)

Brase, Jan C; Sirma, Hüseyin; Sauter, Guido; Simon, Ronald; Schlomm, Thorsten; Beißbarth, Tim; Korf, Ulrike; Kuner, Ruprecht; Sültmann, Holger; Johannes, Marc; Mannsperger, Heiko; Fälth, Maria; Metzger, Jennifer; Kacprzyk, Lukasz A; Andrasiuk, Tatjana; Gade, Stephan; Meister, Michael

2011-01-01

TMPRSS2-ERG gene fusions occur in about 50% of all prostate cancer cases and represent promising markers for molecular subtyping. Although TMPRSS2-ERG fusion seems to be a critical event in prostate cancer, the precise functional role in cancer development and progression is still unclear. We studied large-scale gene expression profiles in 47 prostate tumor tissue samples and in 48 normal prostate tissue samples taken from the non-suspect area of clinical low-risk tumors using Affymetrix GeneChip Exon 1.0 ST microarrays. Comparison of gene expression levels among TMPRSS2-ERG fusion-positive and negative tumors as well as benign samples demonstrated a distinct transcriptional program induced by the gene fusion event. Well-known biomarkers for prostate cancer detection like CRISP3 were found to be associated with the gene fusion status. WNT and TGF-β/BMP signaling pathways were significantly associated with genes upregulated in TMPRSS2-ERG fusion-positive tumors. The TMPRSS2-ERG gene fusion results in the modulation of transcriptional patterns and cellular pathways with potential consequences for prostate cancer progression. Well-known biomarkers for prostate cancer detection were found to be associated with the gene fusion. Our results suggest that the fusion status should be considered in retrospective and future studies to assess biomarkers for prostate cancer detection, progression and targeted therapy

Wildfire Activity Across the Triassic-Jurassic Boundary in the Polish Basin: Evidence from New Fossil Charcoal & Carbon-isotope Data

Science.gov (United States)

Pointer, R.; Belcher, C.; Hesselbo, S. P.; Hodbod, M.; Pieńkowski, G.

2017-12-01

New fossil charcoal abundance and carbon-isotope data from two sedimentary cores provide new evidence of extreme environmental conditions in the Polish Basin during the Latest Triassic to Earliest Jurassic. Sedimentary cores from the Polish Basin provide an excellent record of terrestrial environmental conditions across the Triassic-Jurassic Boundary, a time of climatic extremes. Previous work has shown that the marine realm was affected by a large perturbation to the carbon cycle across the Triassic-Jurassic Boundary (manifested by large negative and positive carbon-isotope excursions) and limited records of charcoal abundance and organic geochemistry have indicated important changes in fire regime in the coeval ecosystems. Here we present two new carbon-isotope records generated from fossil plant matter across the Triassic-Jurassic boundary, and present new charcoal records. The charcoal abundance data confirm that there was variation in wildfire activity during the Late Triassic-Early Jurassic in the Polish Basin. Peaks in the number of fossil charcoal fragments present occur in both sedimentary cores, and increases in fossil charcoal abundance are linked to wildfires, signalling a short-lived rise in wildfire activity. Fossil charcoal abundance does not appear to be fully controlled by total organic matter content, depositional environment or bioturbation. We argue that increased wildfire activity is likely caused by an increase in ignition of plant material as a result of an elevated number of lightning strikes. Global warming (caused by a massive input of carbon into the atmosphere, as indicated by carbon-isotope data) can increase storm activity, leading to increased numbers of lightning strikes. Previous Triassic-Jurassic Boundary wildfire studies have found fossil charcoal abundance peaks at other northern hemisphere sites (Denmark & Greenland), and concluded that they represent increases in wildfire activity in the earliest Jurassic. Our new charcoal and

Targeting TMPRSS2-ERG in Prostate Cancer

Science.gov (United States)

2017-11-01

AWARD NUMBER: W81XWH-13-1-0212 TITLE: Targeting TMPRSS2-ERG in Prostate Cancer PRINCIPAL INVESTIGATOR: David Takeda CONTRACTING...ORGANIZATION: Dana-Farber Cancer Institute Boston, MA 02215 REPORT DATE: November 2017 TYPE OF REPORT: Final PREPARED FOR: U.S. Army Medical Research...Prostate Cancer 5a. CONTRACT NUMBER 5b. GRANT NUMBER W81XWH-13-1-0212 5c. PROGRAM ELEMENT NUMBER 6. AUTHOR(S) David Takeda 5d. PROJECT NUMBER 5e

Exclusion of aldose reductase as a mediator of ERG deficits in a mouse model of diabetic eye disease.

Science.gov (United States)

Samuels, Ivy S; Lee, Chieh-Allen; Petrash, J Mark; Peachey, Neal S; Kern, Timothy S

2012-11-01

Streptozotocin (STZ)-induced diabetes is associated with reductions in the electrical response of the outer retina and retinal pigment epithelium (RPE) to light. Aldose reductase (AR) is the first enzyme required in the polyol-mediated metabolism of glucose, and AR inhibitors have been shown to improve diabetes-induced electroretinogram (ERG) defects. Here, we used control and AR -/- mice to determine if genetic inactivation of this enzyme likewise inhibits retinal electrophysiological defects observed in a mouse model of type 1 diabetes. STZ was used to induce hyperglycemia and type 1 diabetes. Diabetic and age-matched nondiabetic controls of each genotype were maintained for 22 weeks, after which ERGs were used to measure the light-evoked components of the RPE (dc-ERG) and the neural retina (a-wave, b-wave). In comparison to their nondiabetic controls, wildtype (WT) and AR -/- diabetic mice displayed significant decreases in the c-wave, fast oscillation, and off response components of the dc-ERG but not in the light peak response. Nondiabetic AR -/- mice displayed larger ERG component amplitudes than did nondiabetic WT mice; however, the amplitude of dc-ERG components in diabetic AR -/- animals were similar to WT diabetics. ERG a-wave amplitudes were not reduced in either diabetic group, but b-wave amplitudes were lower in WT and AR -/-diabetic mice. These findings demonstrate that the light-induced responses of the RPE and outer retina are disrupted in diabetic mice, but these defects are not due to photoreceptor dysfunction, nor are they ameliorated by deletion of AR. This latter finding suggests that benefits observed in other studies utilizing pharmacological inhibitors of AR might have been secondary to off-target effects of the drugs.

Loss of the NKX3.1 tumorsuppressor promotes the TMPRSS2-ERG fusion gene expression in prostate cancer

International Nuclear Information System (INIS)

Thangapazham, Rajesh; Saenz, Francisco; Katta, Shilpa; Mohamed, Ahmed A; Tan, Shyh-Han; Petrovics, Gyorgy; Srivastava, Shiv; Dobi, Albert

2014-01-01

In normal prostate epithelium the TMPRSS2 gene encoding a type II serine protease is directly regulated by male hormones through the androgen receptor. In prostate cancer ERG protooncogene frequently gains hormonal control by seizing gene regulatory elements of TMPRSS2 through genomic fusion events. Although, the androgenic activation of TMPRSS2 gene has been established, little is known about other elements that may interact with TMPRSS2 promoter sequences to modulate ERG expression in TMPRSS2-ERG gene fusion context. Comparative genomic analyses of the TMPRSS2 promoter upstream sequences and pathway analyses were performed by the Genomatix Software. NKX3.1 and ERG genes expressions were evaluated by immunoblot or by quantitative Real-Time PCR (qRT-PCR) assays in response to siRNA knockdown or heterologous expression. QRT-PCR assay was used for monitoring the gene expression levels of NKX3.1-regulated genes. Transcriptional regulatory function of NKX3.1 was assessed by luciferase assay. Recruitment of NKX3.1 to its cognate elements was monitored by Chromatin Immunoprecipitation assay. Comparative analysis of the TMPRSS2 promoter upstream sequences among different species revealed the conservation of binding sites for the androgen inducible NKX3.1 tumor suppressor. Defects of NKX3.1, such as, allelic loss, haploinsufficiency, attenuated expression or decreased protein stability represent established pathways in prostate tumorigenesis. We found that NKX3.1 directly binds to TMPRSS2 upstream sequences and negatively regulates the expression of the ERG protooncogene through the TMPRSS2-ERG gene fusion. These observations imply that the frequently noted loss-of-function of NKX3.1 cooperates with the activation of TMPRSS2-ERG fusions in prostate tumorigenesis

Web 2.0 Dienste als Ergänzung zu algorithmischen Suchmaschinen

CERN Document Server

Deutschland. Bundesministerium für Wirtschaft und Technologie; Maas, Christian

2008-01-01

Dokumentiert die Ergebnisse des Fachprojekts "Einbingung von Frage-Antwort-Diensten in die Web-Suche", Wintersemester 2007/2008, Dept. Information, Hochschule für angewandte Wissenschaften Hamburg. Mit sozialen Suchdiensten - wie z.B. Yahoo Clever, Lycos iQ oder Mister Wong - ist eine Ergänzung zu den bisherigen Ansätzen in der Web-Suche entstanden. Während Google und Co. automatisch generierte Trefferlisten bieten, binden soziale Suchdienste die Anwender zur Generierung der Suchergebnisse in den Suchprozess ein. Vor diesem Hintergrund wird in diesem Buch der Frage nachgegangen, inwieweit soziale Suchdienste mit traditionellen Suchmaschinen konkurrieren oder diese qualitativ ergänzen können. Der vorliegende Band beleuchtet die hier aufgeworfene Fragestellung aus verschiedenen Perspektiven, um auf die Bedeutung von sozialen Suchdiensten zu schließen.

Discovery of Jurassic ammonite-bearing series in Jebel Bou Hedma (South-Central Tunisian Atlas): Implications for stratigraphic correlations and paleogeographic reconstruction

Science.gov (United States)

Bahrouni, Néjib; Houla, Yassine; Soussi, Mohamed; Boughdiri, Mabrouk; Ali, Walid Ben; Nasri, Ahmed; Bouaziz, Samir

2016-01-01

Recent geological mapping undertaken in the Southern-Central Atlas of Tunisia led to the discovery of Jurassic ammonite-bearing series in the Jebel Bou Hedma E-W anticline structure. These series represent the Southernmost Jurassic rocks ever documented in the outcrops of the Tunisian Atlas. These series which outcrop in a transitional zone between the Southern Tunisian Atlas and the Chott basin offer a valuable benchmark for new stratigraphic correlation with the well-known Jurassic series of the North-South Axis of Central Tunisia and also with the Jurassic subsurface successions transected by petroleum wells in the study area. The preliminary investigations allowed the identification, within the most complete section outcropping in the center of the structure, of numerous useful biochronological and sedimentological markers helping in the establishment of an updated Jurassic stratigraphic framework chart of South-Western Tunisia. Additionally, the Late Jurassic succession documents syn-sedimentary features such as slumping, erosion and reworking of sediments and ammonite faunas that can be considered as strong witnesses of an important geodynamic event around the Jurassic-Cretaceous boundary. These stratigraphic and geodynamic new data make of the Jurassic of Jebel Bou Hedma a key succession for stratigraphic correlation attempt between Atlas Tunisian series and those currently buried in the Chott basin or outcropping in the Saharan platform. Furthermore, the several rich-ammonite identified horizons within the Middle and Upper Jurassic series constitute reliable time lines that can be useful for both paleogeographic and geodynamic reconstructions of this part of the North African Tethyan margin but also in the refinement of the potential migration routes for ammonite populations from the Maghrebian Southern Tethys to Arabia.

Sand transportation and reverse patterns over leeward face of sand dune

Science.gov (United States)

Jiang, Hong; Dun, Hongchao; Tong, Ding; Huang, Ning

2017-04-01

Sand saltation has complex interactions with turbulent flow and dune form. Most models of wind-blown sand consider ideal circumstances such as steady wind velocity and a flat surface, and the bulk of data on wind flow and sand transport over an individual dune has focused mostly on the influence of dune shape or inter-dune space on the wind flow, neglecting the effect of morphology on sand saltation, particularly airflow and sand transportation over the leeward slope. Wind flow structures over the leeward slope of sand dunes have a fundamental influence on the organization of sand dunes. In order to understand sand dune dynamics, lee face airflow and sediment transportation should be paid more attention. Previous field observations could not measure turbulent flow structure well because of the limited observation points and the influence of experiment structure on wind field. In addition, the reverse sand particles over leeward face could not be collected by sand trap in field. Numerous field observations could not measure turbulent flow structure because of the limited observation points and the influence of experimental structures on the wind field. In addition, the reverse transport of sand particles over leeward face could not be collected by sand traps in field. Therefore, this paper aims to investigate the turbulent flow structure and sand transport pattern over the leeward slope. A numerical model of sand saltation over slope terrain is constructed, which also considers the coupling effects between air flow and sand particles. The large eddy simulation method is used to model turbulent flow. Sand transport is simulated by tracking the trajectory of each sand particle. The results show that terrain significantly alters the turbulent air flow structure and wind-blown sand movement, especially over the leeward slope. Here, mass flux increases initially and then decreases with height in the reversed flow region in the direction of wind flow, and the mass flux

Fault features and enrichment laws of narrow-channel distal tight sandstone gas reservoirs: A case study of the Jurassic Shaximiao Fm gas reservoir in the Zhongjiang Gas Field, Sichuan Basin

Directory of Open Access Journals (Sweden)

Zhongping Li

2016-11-01

Full Text Available The Jurassic Shaximiao Fm gas reservoir in the Zhongjiang Gas Field, Sichuan Basin, is the main base of Sinopec Southwest Oil & Gas Company for gas reserves and production increase during the 12th Five-Year Plan. However, its natural gas exploration and development process was restricted severely, since the exploration wells cannot be deployed effectively in this area based on the previous gas accumulation and enrichment pattern of “hydrocarbon source fault + channel sand body + local structure”. In this paper, the regional fault features and the gas accumulation and enrichment laws were discussed by analyzing the factors like fault evolution, fault elements, fault-sand body configuration (the configuration relationship between hydrocarbon source faults and channel sand bodies, trap types, and reservoir anatomy. It is concluded that the accumulation and enrichment of the Shaximiao Fm gas reservoir in this area is controlled by three factors, i.e., hydrocarbon source, sedimentary facies and structural position. It follows the accumulation laws of source controlling region, facies controlling zone and position controlling reservoir, which means deep source and shallow accumulation, fault-sand body conductivity, multiphase channel, differential accumulation, adjusted enrichment and gas enrichment at sweet spots. A good configuration relationship between hydrocarbon source faults and channel sand bodies is the basic condition for the formation of gas reservoirs. Natural gas accumulated preferentially in the structures or positions with good fault-sand body configuration. Gas reservoirs can also be formed in the monoclinal structures which were formed after the late structural adjustment. In the zones supported by multiple faults or near the crush zones, no gas accumulation occurs, but water is dominantly produced. The gas-bearing potential is low in the area with undeveloped faults or being 30 km away from the hydrocarbon source faults. So

Modeling the Middle Jurassic ocean circulation

Directory of Open Access Journals (Sweden)

Maura Brunetti

2015-10-01

Full Text Available We present coupled ocean–sea-ice simulations of the Middle Jurassic (∼165 Ma when Laurasia and Gondwana began drifting apart and gave rise to the formation of the Atlantic Ocean. Since the opening of the Proto-Caribbean is not well constrained by geological records, configurations with and without an open connection between the Proto-Caribbean and Panthalassa are examined. We use a sea-floor bathymetry obtained by a recently developed three-dimensional (3D elevation model which compiles geological, palaeogeographical and geophysical data. Our original approach consists in coupling this elevation model, which is based on detailed reconstructions of oceanic realms, with a dynamical ocean circulation model. We find that the Middle Jurassic bathymetry of the Central Atlantic and Proto-Caribbean seaway only allows for a weak current of the order of 2 Sv in the upper 1000 m even if the system is open to the west. The effect of closing the western boundary of the Proto-Caribbean is to increase the transport related to barotropic gyres in the southern hemisphere and to change water properties, such as salinity, in the Neo-Tethys. Weak upwelling rates are found in the nascent Atlantic Ocean in the presence of this superficial current and we discuss their compatibility with deep-sea sedimentological records in this region.

Palynology of the middle jurassic lower graben sand formation of the U-1 well, Danish Central Trough

Energy Technology Data Exchange (ETDEWEB)

Hoelstad, T.

1986-01-01

Twenty-one sidewall core samples from the lower 56 metres of the Lower Graben Sand Formation in the U-1 well are described with respect to their kerogen content and microflora in order to gain a better understanding of the depositional environment and the age relations. Based on e.g. the inconsistent dinoflagellate cyst occurrences, marginal marine conditions are concluded. The dinoglagellate cyst Pareodinia prolongata, Acanthaulax senta, Scriniodinium crystallinum, Energlynia acollaris, Wanaea thysanota and Hystrichogonyaulax cladophora and the recovered playnomorph assemblage in general permit an age determination as follows: 21 m Collovian undifferentiated, 7.9 latest Middle Callovian - earliest Late Callovian, 6.1 m latest Late Callovian and 21 m latest Late Callovian. - earliest Early Oxfordian.

Prognostic Significance of TMPRSS2-ERG Fusion Gene in Prostate Cancer

Czech Academy of Sciences Publication Activity Database

Kulda, V.; Topolčan, O.; Kučera, R.; Kripnerová, M.; Srbecká, K.; Hora, M.; Hes, O.; Klečka, J.; Babuška, V.; Rousárová, M.; Benson, Veronika; Pesta, M.

2016-01-01

Roč. 36, č. 7 (2016), s. 4787-4793 ISSN 0250-7005 Institutional support: RVO:61388971 Keywords : Prostate cancer * TMPRSS2-ERG * PSA Subject RIV: FD - Oncology ; Hematology Impact factor: 1.937, year: 2016

Improved functional expression of recombinant human ether-a-go-go (hERG K+ channels by cultivation at reduced temperature

Directory of Open Access Journals (Sweden)

Hamilton Bruce

2007-12-01

Full Text Available Abstract Background HERG potassium channel blockade is the major cause for drug-induced long QT syndrome, which sometimes cause cardiac disrhythmias and sudden death. There is a strong interest in the pharmaceutical industry to develop high quality medium to high-throughput assays for detecting compounds with potential cardiac liability at the earliest stages of drug development. Cultivation of cells at lower temperature has been used to improve the folding and membrane localization of trafficking defective hERG mutant proteins. The objective of this study was to investigate the effect of lower temperature maintenance on wild type hERG expression and assay performance. Results Wild type hERG was stably expressed in CHO-K1 cells, with the majority of channel protein being located in the cytoplasm, but relatively little on the cell surface. Expression at both locations was increased several-fold by cultivation at lower growth temperatures. Intracellular hERG protein levels were highest at 27°C and this correlated with maximal 3H-dofetilide binding activity. In contrast, the expression of functionally active cell surface-associated hERG measured by patch clamp electrophysiology was optimal at 30°C. The majority of the cytoplasmic hERG protein was associated with the membranes of cytoplasmic vesicles, which markedly increased in quantity and size at lower temperatures or in the presence of the Ca2+-ATPase inhibitor, thapsigargin. Incubation with the endocytic trafficking blocker, nocodazole, led to an increase in hERG activity at 37°C, but not at 30°C. Conclusion Our results are consistent with the concept that maintenance of cells at reduced temperature can be used to boost the functional expression of difficult-to-express membrane proteins and improve the quality of assays for medium to high-throughput compound screening. In addition, these results shed some light on the trafficking of hERG protein under these growth conditions.

Middle-Upper Triassic and Middle Jurassic tetrapod track assemblages of southern Tunisia, Sahara Platform

Science.gov (United States)

Niedźwiedzki, Grzegorz; Soussi, Mohamed; Boukhalfa, Kamel; Gierliński, Gerard D.

2017-05-01

Three tetrapod track assemblages from the early-middle Mesozoic of southern Tunisia are reported. The strata exposed at the Tejra 2 clay-pit near the Medenine and Rehach site, located in the vicinity of Kirchaou, contain the first tetrapod tracks found in the Triassic of Tunisia. The Middle Jurassic (early Aalenian) dinosaur tracks are reported from the Mestaoua plain near Tataouine. In the Middle Triassic outcrop of the Tejra 2 clay-pit, tridactyl tracks of small and medium-sized dinosauromorphs, were discovered. These tracks represent the oldest evidence of dinosaur-lineage elements in the Triassic deposits of Tunisia. Similar tracks have been described from the Middle Triassic of Argentina, France and Morocco. An isolated set of the manus and pes of a quadrupedal tetrapod discovered in Late Triassic Rehach tracksite is referred to a therapsid tracemaker. The Middle Jurassic deposits of the Mestaoua plain reveal small and large tridactyl theropod dinosaur tracks (Theropoda track indet. A-C). Based on comparison with the abundant record of Triassic tetrapod ichnofossils from Europe and North America, the ichnofauna described here indicates the presence of a therapsid-dinosauromorph ichnoassociation (without typical Chirotheriidae tracks) in the Middle and Late Triassic, which sheds light on the dispersal of the Middle-Upper Triassic tetrapod ichnofaunas in this part of Gondwana. The reported Middle Jurassic ichnofauna show close similarities to dinosaur track assemblages from the Lower and Middle Jurassic of northwestern Africa, North America, Europe and also southeastern Asia. Sedimentological and lithostratigraphic data of each new tracksite have been defined on published data and new observations. Taken together, these discoveries present a tantalizing window into the evolutionary history of tetrapods from the Triassic and Jurassic of southern Tunisia. Given the limited early Mesozoic tetrapod record from the region, these discoveries are of both temporal and

On- and off-response ERGs elicited by sawtooth stimuli in normal subjects and glaucoma patients.

Science.gov (United States)

Pangeni, Gobinda; Lämmer, Robert; Tornow, Ralf P; Horn, Folkert K; Kremers, Jan

2012-06-01

The aim of this study is to measure the on- and off-responses and their response asymmetries elicited by sawtooth stimuli in normal subjects and glaucoma patients. Furthermore, the correlation between the ERGs and other functional and structural parameters are investigated. Full-field stimuli were produced using a Ganzfeld bowl with Light Emitting Diodes (LEDs) as light sources. On- and off-response ERGs were recorded from 17 healthy subjects, 12 pre-perimetric and 15 perimetric glaucoma patients using 4-Hz luminance rapid-on and rapid-off sawtooth stimuli (white light; mean luminance 55 cd/m(2)) at 100% contrast. The on- and off-responses were added to study response asymmetries. In addition, flash ERGs were elicited by red stimuli (200 cd/m(2)) on a blue background (10 cd/m(2)). The mean deviations (MD) of the visual field defects were obtained by standard automated perimetry. The retinal nerve fibre layer thickness (RNFLT) was measured with Spectral Domain Optical Coherence Tomography (SOCT). We studied the correlation between ERG response amplitudes, visual field mean deviation (MDs) and RNFLT values. The on-responses showed an initial negative (N-on) followed by a positive (P-on), a late positive (LP-on) and a late negative responses (LN-on). The off-responses showed an initial positive (P-off) a late positive (LP-off) and a late negative response (LN-off). The addition of on- and off-responses revealed an initial positive (P-add) and a late negative response (LN-add). The on-response components (N-on, P-on and LN-on) in the glaucoma patients were relatively similar to those of the control subjects. However, the LP-on was significantly elevated (p = 0.03) in perimetric patients. The LP-off was significantly elevated (p < 0.001), and the amplitude of LN-off was significantly reduced in perimetric patients (p = 0.02). The LN-add amplitude was significantly reduced (p < 0.001) and delayed (p = 0.03) in perimetric patients. The amplitudes of the LN-off and LN

Reclaimability of the spent sand mixture – sand with bentonite – sand with furfuryl resin

Directory of Open Access Journals (Sweden)

J. Dańko

2011-04-01

Full Text Available Introduction of new binding materials and new technologies of their hardening in casting moulds and cores production requires theapplication of reclamation methods adequate to their properties as well as special devices realizing tasks. The spent sands circulationsystem containing the same kind of moulding and core sands is optimal from the point of view of the expected reclamation results.However, in the face of a significant variability of applied technologies and related to them various reclamation methods, the need - of theobtained reclamation products assessment on the grounds of systematic criteria and uniform bases – arises, with a tendency of indicatingwhich criteria are the most important for the given sand system. The reclaimability results of the mixture of the spent moulding sand withGeko S bentonite and the spent core sand with the Kaltharz 404U resin hardened by acidic hardener 100 T3, are presented in the paper.Investigations were performed with regard to the estimation of an influence of core sands additions (10 –25% on the reclaimed materialquality. Dusts and clay content in the reclaim, its chemical reaction (pH and ignition loss were estimated. The verification of the reclaiminstrumental assessment was performed on the basis of the technological properties estimation of moulding sand with bentonite, where the reclaimed material was used as a matrix.

Depositional environments and oil potential of Jurassic/Cretaceous source rocks within the Seychelles microcontinent

Energy Technology Data Exchange (ETDEWEB)

Plummer, P.S.; Joseph, P.R.; Samson, P.J. [Seychelles National Oil Co., Mahe (Seychelles)

1998-12-31

The Seychelles microcontinent became isolated between the Somali, Mascarene and Arabian basins of the Indian Ocean as a result of the Mesozoic fragmentation of Gondwana. Major rifting events occurred during the Triassic-Middle Jurassic and Late Cretaceous (Cenomanian-Santonian and Maastrichtian) during which shaly source rock facies accumulated in principally marginal marine/deltaic environments. Between these times, post-rift passive margin deposition within restricted to open marine environments produced shaly source rocks during late Middle Jurasic-Early Cretaceous, Campanian-Maastrichtian and Paleocene times. Recent geochemical analysis of cuttings from the Seagull Shoals-1 well has identified an oil-prone liptinitic (Type II) coaly shale within early Middle Jurassic abandoned deltaic deposits. This coaly source rock is regionally developed, having also been identified in the Majunja and Morondava basins of Madagascar. Oil-prone Type II organic matter has also been identified in the Owen Bank A-1 well within restricted marine shales of late Middle Jurassic age. These shales are part of a thick post-rift source rock sequence that extends into the Early Cretaceous and is in part correlative with the proven Late Jurassic Uarandab Shale of Somalia. Analysis of Campanian marine shales from Reith Bank-1 well identified significant dilution of total organic carbon content in composite, compared to picked, well cuttings samples. This finding supports a published inference that these post-rift shales have source rock potential. (author)

Heterogeneity of PTEN and ERG expression in prostate cancer on core needle biopsies: implications for cancer risk stratification and biomarker sampling.

Science.gov (United States)

Shah, Rajal B; Bentley, James; Jeffery, Zach; DeMarzo, Angelo M

2015-05-01

ERG and PTEN biomarkers are increasingly being analyzed on prostate core biopsies (NBXs); ERG as a marker of clonality and number of separately arising tumor foci and PTEN for prognostic information. Yet, in patients with multiple biopsy cores positive for cancer (PCa), there is no standardized approach for interrogation of these biomarkers in terms of the number of positive cores to evaluate. A total of 194 NBX cases containing more than one positive core with cancer were evaluated for ERG overexpression and PTEN loss by immunostaining (immunohistochemistry) of all positive cores. ERG overexpression or PTEN loss in at least one cancer core was present in 111 (57%) and 69 (36%) cases respectively. ERG overexpression was significantly associated with PTEN loss (P < .0001), and PTEN loss was associated with a high Gleason score (P < .0001). Inter- and intra-tumor core staining heterogeneity for ERG overexpression occurred in 42% and 5% cases and for PTEN loss both intra- and inter-tumor core heterogeneity was 68%. PTEN staining was highly discordant between PCa sites regardless of laterality. When the Gleason score was non-uniform across PCa sites, the combination of cores showing the highest Gleason score and largest tumor volume provided the best representation of ERG overexpression (92%) and PTEN loss (98%). When grades were uniform across cancer sites, the highest tumor volume core was generally representative of ERG overexpression (90%) but was less representative for PTEN loss (76%). Our results suggest that knowledge of this heterogeneity is critical for developing optimal yet cost-effective strategies to identify these underlying molecular abnormalities. Copyright © 2015 Elsevier Inc. All rights reserved.

On the construction of QED using ERG

International Nuclear Information System (INIS)

Sonoda, H

2007-01-01

It has been known for some time that a smooth momentum cutoff is compatible with local gauge symmetries. In this paper, we show concretely how to construct QED using the exact renormalization group (ERG). First, we give a new derivation of the Ward identity for the Wilson action using the technique of composite operators. Second, parametrizing the theory by its asymptotic behaviour for a large cutoff, we show how to fine tune the parameters to satisfy the identity. Third, we recast the identity as an invariance of the Wilson action under a nonlinear BRST transformation

Sedimentary record of subsidence pulse at the Triassic/Jurassic boundary interval in the Slovenian Basin (eastern Southern Alps

Directory of Open Access Journals (Sweden)

Rožič Boštjan

2017-08-01

Full Text Available In the Alpine Realm the Early Jurassic is characterized by the disintegration and partial drowning of vast platform areas. In the eastern part of the Southern Alps (present-day NW Slovenia, the Julian Carbonate Platform and the adjacent, E-W extending Slovenian Basin underwent partial disintegration, drowning and deepening from the Pliensbachian on, whereas only nominal environmental changes developed on the large Dinaric (Friuli, Adriatic Carbonate Platform to the south (structurally part of the Dinarides. These events, however, were preceded by an earlier - and as yet undocumented extensional event - that took place near the Triassic/Jurassic boundary. This paper provides evidence of an accelerated subsidence from four selected areas within the Slovenian Basin, which show a trend of eastwardly-decreasing deformation. In the westernmost (Mrzli vrh section - the Upper Triassic platform-margin - massive dolomite is overlain by the earliest Jurassic toe-of-slope carbonate resediments and further, by basin-plain micritic limestone. Further east (Perbla and Liščak sections the Triassic-Jurassic transition interval is marked by an increase in resedimented carbonates. We relate this to the increasing inclination and segmentation of the slope and adjacent basin floor. The easternmost (Mt. Porezen area shows a rather monotonous, latest Triassic-Early Jurassic basinal sedimentation. However, changes in the thickness of the Hettangian-Pliensbachian Krikov Formation point to a tilting of tectonic blocks within the basin area. Lateral facies changes at the base of the formation indicate that the tilting occurred at and/or shortly after the Triassic/Jurassic boundary

Sedimentary record of subsidence pulse at the Triassic/Jurassic boundary interval in the Slovenian Basin (eastern Southern Alps)

Science.gov (United States)

Rožič, Boštjan; Jurkovšek, Tea Kolar; Rožič, Petra Žvab; Gale, Luka

2017-08-01

In the Alpine Realm the Early Jurassic is characterized by the disintegration and partial drowning of vast platform areas. In the eastern part of the Southern Alps (present-day NW Slovenia), the Julian Carbonate Platform and the adjacent, E-W extending Slovenian Basin underwent partial disintegration, drowning and deepening from the Pliensbachian on, whereas only nominal environmental changes developed on the large Dinaric (Friuli, Adriatic) Carbonate Platform to the south (structurally part of the Dinarides). These events, however, were preceded by an earlier - and as yet undocumented extensional event - that took place near the Triassic/Jurassic boundary. This paper provides evidence of an accelerated subsidence from four selected areas within the Slovenian Basin, which show a trend of eastwardly-decreasing deformation. In the westernmost (Mrzli vrh) section - the Upper Triassic platform-margin - massive dolomite is overlain by the earliest Jurassic toe-of-slope carbonate resediments and further, by basin-plain micritic limestone. Further east (Perbla and Liščak sections) the Triassic-Jurassic transition interval is marked by an increase in resedimented carbonates. We relate this to the increasing inclination and segmentation of the slope and adjacent basin floor. The easternmost (Mt. Porezen) area shows a rather monotonous, latest Triassic-Early Jurassic basinal sedimentation. However, changes in the thickness of the Hettangian-Pliensbachian Krikov Formation point to a tilting of tectonic blocks within the basin area. Lateral facies changes at the base of the formation indicate that the tilting occurred at and/or shortly after the Triassic/Jurassic boundary

Rehabilitating drug-induced long-QT promoters: in-silico design of hERG-neutral cisapride analogues with retained pharmacological activity.

Science.gov (United States)

Durdagi, Serdar; Randall, Trevor; Duff, Henry J; Chamberlin, Adam; Noskov, Sergei Y

2014-03-08

The human ether-a-go-go related gene 1 (hERG1), which codes for a potassium ion channel, is a key element in the cardiac delayed rectified potassium current, IKr, and plays an important role in the normal repolarization of the heart's action potential. Many approved drugs have been withdrawn from the market due to their prolongation of the QT interval. Most of these drugs have high potencies for their principal targets and are often irreplaceable, thus "rehabilitation" studies for decreasing their high hERG1 blocking affinities, while keeping them active at the binding sites of their targets, have been proposed to enable these drugs to re-enter the market. In this proof-of-principle study, we focus on cisapride, a gastroprokinetic agent withdrawn from the market due to its high hERG1 blocking affinity. Here we tested an a priori strategy to predict a compound's cardiotoxicity using de novo drug design with molecular docking and Molecular Dynamics (MD) simulations to generate a strategy for the rehabilitation of cisapride. We focused on two key receptors, a target interaction with the (adenosine) receptor and an off-target interaction with hERG1 channels. An analysis of the fragment interactions of cisapride at human A2A adenosine receptors and hERG1 central cavities helped us to identify the key chemical groups responsible for the drug activity and hERG1 blockade. A set of cisapride derivatives with reduced cardiotoxicity was then proposed using an in-silico two-tier approach. This set was compared against a large dataset of commercially available cisapride analogs and derivatives. An interaction decomposition of cisapride and cisapride derivatives allowed for the identification of key active scaffolds and functional groups that may be responsible for the unwanted blockade of hERG1.

Bag1 Co-chaperone Promotes TRC8 E3 Ligase-dependent Degradation of Misfolded Human Ether a Go-Go-related Gene (hERG) Potassium Channels.

Science.gov (United States)

Hantouche, Christine; Williamson, Brittany; Valinsky, William C; Solomon, Joshua; Shrier, Alvin; Young, Jason C

2017-02-10

Cardiac long QT syndrome type 2 is caused by mutations in the human ether a go-go-related gene (hERG) potassium channel, many of which cause misfolding and degradation at the endoplasmic reticulum instead of normal trafficking to the cell surface. The Hsc70/Hsp70 chaperones assist the folding of the hERG cytosolic domains. Here, we demonstrate that the Hsp70 nucleotide exchange factor Bag1 promotes hERG degradation by the ubiquitin-proteasome system at the endoplasmic reticulum to regulate hERG levels and channel activity. Dissociation of hERG complexes containing Hsp70 and the E3 ubiquitin ligase CHIP requires the interaction of Bag1 with Hsp70, but this does not involve the Bag1 ubiquitin-like domain. The interaction with Bag1 then shifts hERG degradation to the membrane-anchored E3 ligase TRC8 and its E2-conjugating enzyme Ube2g2, as determined by siRNA screening. TRC8 interacts through the transmembrane region with hERG and decreases hERG functional expression. TRC8 also mediates degradation of the misfolded hERG-G601S disease mutant, but pharmacological stabilization of the mutant structure prevents degradation. Our results identify TRC8 as a previously unknown Hsp70-independent quality control E3 ligase for hERG. © 2017 by The American Society for Biochemistry and Molecular Biology, Inc.

Eastern Scheldt Sand, Baskarp Sand No. 15

DEFF Research Database (Denmark)

Andersen, A. T; Madsen, E. B.; Schaarup-Jensen, A. L.

The present data report contains data from 13 drained triaxial tests, performed on two different sand types in the Soil Mechanics Laboratory at Aalborg University in March, 1997. Two tests have been performed on Baskarp Sand No. 15, which has already ken extensively tested in the Soil Mechanics...... Laboratory. The remaining 11 triaxial tests have ben performed on Eastern Scheldt Sand, which is a material not yet investigated at the Soil Mechanics Laboratory. In the first pari of this data report, the characteristics of the two sand types in question will be presented. Next, a description...... will described. In this connection, the procedure for preparation of the soil specimens will be presented, and the actual performance of the tests will be briefly outlined. Finally, the procedure for processing of the measurements from the laboratory in order to obtain usable data will be described. The final...

The Jurassic of Denmark and Greenland: Sedimentology and sequence stratigraphy of paralic and shallow marine Upper Jurassic sandstones in the northern Danish Central Graben

Directory of Open Access Journals (Sweden)

Johannessen, Peter N.

2003-10-01

Full Text Available Paralic and shallow marine sandstones were deposited in the Danish Central Graben during Late Jurassic rifting when half-grabens were developed and the overall eustatic sea level rose. During the Kimmeridgian, an extensive plateau area consisting of the Heno Plateau and the Gertrud Plateau was situated between two highs, the Mandal High to the north, and the combined Inge and Mads Highs to the west. These highs were land areas situated on either side of the plateaus and supplied sand to the Gertrud and Heno Plateaus. Two graben areas, the Feda and Tail End Grabens, flanked the plateau area to the west and east, respectively. The regressive–ransgressive succession consists of intensely bioturbated shoreface sandstones, 25–75 m thick. Two widespread unconformities (SB1, SB2 are recognised on the plateaus, forming the base of sequence 1 and sequence 2, respectively. These unconformities were created by a fall in relative sea level during which rivers may have eroded older shoreface sands and transported sediment across the Heno andGertrud Plateaus, resulting in the accumulation of shoreface sandstones farther out in the Feda and Tail End Grabens, on the south-east Heno Plateau and in the Salt Dome Province. Duringsubsequent transgression, fluvial sediments were reworked by high-energy shoreface processes on the Heno and Gertrud Plateaus, leaving only a lag of granules and pebbles on the marine transgressive surfaces of erosion (MTSE1, MTSE2.The sequence boundary SB1 can be traced to the south-east Heno Plateau and the Salt Dome Province, where it is marked by sharp-based shoreface sandstones. During low sea level, erosion occurred in the southern part of the Feda Graben, which formed part of the Gertrud and Heno Plateaus, and sedimentation occurred in the Norwegian part of the Feda Graben farther to the north. During subsequent transgression, the southern part of the Feda Graben began to subside, and a succession of backstepping back

Correlation of basement rocks from Waka Nui-1 and Awhitu-1, and the Jurassic regional geology of Zealandia

International Nuclear Information System (INIS)

Mortimer, N.; Raine, J.I.; Cook, R.A.

2009-01-01

Core and cuttings of sandstone and mudstone from Waka Nui-1, an offshore oil exploration well west of Northland, and from Awhitu-1, a water bore in western Auckland, add to the growing number of samples retrieved from otherwise inaccessible basement of the Zealandia continent. On the basis of pollen and spores, the sedimentary rocks at the bottom of Waka Nui-1 are dated as Early-Middle Jurassic, and rocks from Awhitu-1 are Late Jurassic. On the basis of age, sandstone petrology, and geographic position, a correlation of rocks in both wells with Murihiku Terrane is probable. In New Zealand, Jurassic sedimentary rocks have usually been interpreted in a tectonostratigraphic terrane context. An alternative way to look at the New Zealand Late Jurassic to Early Cretaceous sedimentary rocks is as potentially interconnected forearc, intra-arc, back-arc, and intracontinental basins that evolved adjacent to an active margin. (author). 47 refs., 6 figs., 3 tabs

Rock mechanics related to Jurassic underburden at Valdemar oil field

DEFF Research Database (Denmark)

Foged, Niels

1999-01-01

.It has been initiated as a feasibility study of the North Jens-1 core 12 taken in the top Jurassic clay shale as a test specimens for integrated petrological, mineralogical and rock mechanical studies. Following topics are studied:(1) Pore pressure generation due to conversion of organic matter...... and deformation properties of the clay shale using the actual core material or outcrop equivalents.(3) Flushing mechanisms for oil and gas from source rocks due to possibly very high pore water pressure creating unstable conditions in deeply burried sedimentsThere seems to be a need for integrating the knowledge...... in a number of geosciences to the benefit of common understanding of important reservoir mechanisms. Rock mechanics and geotechnical modelling might be key points for this understanding of reservoir geology and these may constitute a platform for future research in the maturing and migration from the Jurassic...

A mysterious giant ichthyosaur from the lowermost Jurassic of Wales

Directory of Open Access Journals (Sweden)

Jeremy E. Martin

2015-12-01

Full Text Available Ichthyosaurs rapidly diversified and colonised a wide range of ecological niches during the Early and Middle Triassic period, but experienced a major decline in diversity near the end of the Triassic. Timing and causes of this demise and the subsequent rapid radiation of the diverse, but less disparate, parvipelvian ichthyosaurs are still unknown, notably because of inadequate sampling in strata of latest Triassic age. Here, we describe an exceptionally large radius from Lower Jurassic deposits at Penarth near Cardiff, south Wales (UK the morphology of which places it within the giant Triassic shastasaurids. A tentative total body size estimate, based on a regression analysis of various complete ichthyosaur skeletons, yields a value of 12–15 m. The specimen is substantially younger than any previously reported last known occurrences of shastasaurids and implies a Lazarus range in the lowermost Jurassic for this ichthyosaur morphotype.

TRANSITION FROM CARBONATE PLATFORM TO PELAGIC DEPOSITION (MID JURASSIC- LATE CRETACEOUS, VOURINOS MASSIF, NORTHERN GREECE

Directory of Open Access Journals (Sweden)

NICOLAOS CARRAS

2004-03-01

Full Text Available A Jurassic- Cretaceous carbonate succession crops out along the Zyghosti Rema, Kozani (Northern Greece. The substratum consists of the ophiolitic succession of the Vourinos Massif (Pelagonian Domain: serpentinites tectonically overlain by basalts, with thin lenses of radiolarian cherts of middle Bathonian age. The contact with the overlying Jurassic limestones is tectonic. Eight informal units have been distinguished within the Mesozoic limestones, from the base upwards. (A bioclastic, intraclastic and oolitic packstone (Callovian- Oxfordian. (B bioclastic packstone and coral boundstone (Oxfordian . (C bioclastic and oncoidal wackestone with Clypeina jurassica (Oxfordian- Upper Kimmeridgian. (D (Upper Kimmeridgian- Portlandian: oncoidal packstone and rudstone (facies D1; intraclastic and bioclastic grainstone and packstone (facies D2; neptunian dykes with intraclastic and bioclastic wackestone and packstone filling (facies D3; neptunian dykes with Fe-Mn rich laterite filling and with pink silty filling of early Late Cretaceous age. An unconformity surface, due to emersion and erosion of the platform during the latest Jurassic- Early Cretaceous, is overlain by (E intraclastic, bioclastic packstone and grainstone (Cenomanian. (F massive body of debrites with coral, echinoderm, algae and rudist large clasts (facies F1 (Cenomanian; turbiditic beds of bioclastic, intraclastic and lithoclastic rudstone and grainstone (facies F2. (G thin bedded bioclastic mudstone and wackestone with planktonic foraminifers and radiolarians, alternating with turbiditic beds of bioclastic, intraclastic packstone and rudstone and with conglomeratic levels and slumped beds of the previous turbidites (upper Santonian- lower Campanian. (H: bioclastic packstone with planktonic foraminifers (facies H1 (lower Campanian - ?Maastrichtian; amalgamated turbiditic beds of bioclastic wackestone and packstone with planktonic foraminifers (facies H2; turbiditic beds of bioclastic

The Role of mf-ERG in the Diagnosis and Treatment of Age-Related Macular Degeneration: Electrophysiological Features of AMD.

Science.gov (United States)

Moschos, Marilita M; Nitoda, Eirini

2018-01-01

Age-related macular cegeneration (AMD) is the leading cause of visual dysfunction worldwide, affecting 9-25% of individuals between 65 and 75 years old. We have reviewed the published articles investigating the role of multifocal electroretinogram (mf-ERG) in the diagnosis and treatment of AMD. Visual evoked potentials have revealed decreased amplitudes and higher latencies in patients with AMD, while the degeneration of photoreceptors and abnormalities of retinal pigment epithelium can be identified by electro-oculogram recordings. Moreover, ERG can detect the functional abnormalities observed in AMD and evaluate each therapeutic approach. The record of local electrophysiological responses coming from different retinal areas can be accurately performed by mfERG. The accuracy of mfERG in detecting the degeneration of photoreceptors, as well the disturbances of macular function, could be useful both in the early diagnosis of AMD and the assessment of treatment efficacy.

Basin geodynamics and sequence stratigraphy of Upper Triassic to Lower Jurassic deposits of Southern Tunisia

Science.gov (United States)

Carpentier, Cédric; Hadouth, Suhail; Bouaziz, Samir; Lathuilière, Bernard; Rubino, Jean-Loup

2016-05-01

Aims of this paper are to propose a geodynamic and sequential framework for the late Triassic and early Jurassic of and south Tunisia and to evidence the impact of local tectonics on the stratigraphic architecture. Facies of the Upper Triassic to Lower Jurassic of Southern Tunisia have been interpreted in terms of depositional environments. A sequential framework and correlation schemes are proposed for outcrops and subsurface transects. Nineteen middle frequency sequences inserted in three and a half low frequency transgression/regression cycles were evidenced. Despite some datation uncertainties and the unknown durations of Lower Jurassic cycles, middle frequency sequences appear to be controlled by eustasy. In contrast the tectonics acted as an important control on low frequency cycles. The Carnian flooding was certainly favored by the last stages of a rifting episode which started during the Permian. The regression accompanied by the formation of stacked angular unconformities and the deposition of lowstand deposits during the late Carnian and Norian occured during the uplift and tilting of the northern basin margins. The transpressional activity of the Jeffara fault system generated the uplift of the Tebaga of Medenine high from the late Carnian and led to the Rhaetian regional angular Sidi Stout Unconformity. Facies analysis and well-log correlations permitted to evidence that Rhaetian to Lower Jurassic Messaoudi dolomites correspond to brecciated dolomites present on the Sidi Stout unconformity in the North Dahar area. The Early-cimmerian compressional event is a possible origin for the global uplift of the northern African margin and Western Europe during the late Carnian and the Norian. During the Rhaetian and the early Jurassic a new episode of normal faulting occured during the third low frequency flooding. This tectonosedimentary evolution ranges within the general geodynamic framework of the north Gondwana margin controlled by the opening of both

A Middle Jurassic heterodontosaurid dinosaur from Patagonia and the evolution of heterodontosaurids

Science.gov (United States)

Pol, Diego; Rauhut, Oliver W. M.; Becerra, Marcos

2011-05-01

Heterodontosauridae is a morphologically divergent group of dinosaurs that has recently been interpreted as one of the most basal clades of Ornithischia. Heterodontosaurid remains were previously known from the Early Jurassic of southern Africa, but recent discoveries and studies have significantly increased the geographical and temporal range for this clade. Here, we report a new ornithischian dinosaur from the Middle Jurassic Cañadón Asfalto Formation in central Patagonia, Argentina. This new taxon, Manidens condorensis gen. et sp. nov., includes well-preserved craniomandibular and postcranial remains and represents the only diagnostic ornithischian specimen yet discovered in the Jurassic of South America so far. Derived features of its anatomy indicate that Manidens belongs to Heterodontosauridae, as the sister taxon of Heterodontosaurus and other South African heterodontosaurids. The presence of posterior dentary teeth with high crowns but lacking extensive wear facets in Manidens suggests that this form represents an intermediate stage in the development of the remarkable adaptations to herbivory described for Heterodontosaurus. The dentition of Manidens condorensis also has autapomorphies, such as asymmetrically arranged denticles in posterior teeth and a mesially projected denticle in the posteriormost teeth. At an estimated total length of 60-75 cm, Manidens furthermore confirms the small size of basal heterodontosaurids.

Application of Wave Distribution Function Method to the ERG/PWE Data

Science.gov (United States)

Ota, M.; Kasahara, Y.; Matsuda, S.; Kojima, H.; Matsuoka, A.; Hikishima, M.; Kasaba, Y.; Ozaki, M.; Yagitani, S.; Tsuchiya, F.; Kumamoto, A.

2017-12-01

The ERG (Arase) satellite was launched on 20 December 2016 to study acceleration and loss mechanisms of relativistic electrons in the Earth's magnetosphere. The Plasma Wave Experiment (PWE), which is one of the science instruments on board the ERG satellite, measures electric field and magnetic field. The PWE consists of three sub-systems; EFD (Electric Field Detector), OFA/WFC (Onboard Frequency Analyzer and Waveform Capture), and HFA (High Frequency Analyzer).The OFA/WFC measures electromagnetic field spectra and raw waveforms in the frequency range from few Hz to 20 kHz. The OFA produces three kind of data; OFA-SPEC (power spectrum), OFA-MATRIX (spectral matrix), and OFA-COMPLEX (complex spectrum). The OFA-MATRIX measures ensemble averaged complex cross-spectra of two electric field components, and of three magnetic field components. The OFA-COMPLEX measures instantaneous complex spectra of electric and magnetic fields. These data are produced every 8 seconds in the nominal mode, and it can be used for polarization analysis and wave propagation direction finding.In general, spectral matrix composed by cross-spectra of observed signals is used for direction finding, and many algorithms have been proposed. For example, Means method and SVD method can be applied on the assumption that the spectral matrix is consists of a single plane wave, while wave distribution function (WDF) method is applicable even to the data in which multiple numbers of plane waves are simultaneously included. In this presentation, we introduce the results when the WDF method is applied to the ERG/PWE data.

The effects of deoxyelephantopin on the cardiac delayed rectifier potassium channel current (IKr) and human ether-a-go-go-related gene (hERG) expression.

Science.gov (United States)

Teah, Yi Fan; Abduraman, Muhammad Asyraf; Amanah, Azimah; Adenan, Mohd Ilham; Sulaiman, Shaida Fariza; Tan, Mei Lan

2017-09-01

Elephantopus scaber Linn and its major bioactive component, deoxyelephantopin are known for their medicinal properties and are often reported to have various cytotoxic and antitumor activities. This plant is widely used as folk medicine for a plethora of indications although its safety profile remains unknown. Human ether-a-go-go-related gene (hERG) encodes the cardiac I Kr current which is a determinant of the duration of ventricular action potentials and QT interval. The hERG potassium channel is an important antitarget in cardiotoxicity evaluation. This study investigated the effects of deoxyelephantopin on the current, mRNA and protein expression of hERG channel in hERG-transfected HEK293 cells. The hERG tail currents following depolarization pulses were insignificantly affected by deoxyelephantopin in the transfected cell line. Current reduction was less than 40% as compared with baseline at the highest concentration of 50 μM. The results were consistent with the molecular docking simulation and hERG surface protein expression. Interestingly, it does not affect the hERG expression at both transcriptional and translational level at most concentrations, although higher concentration at 10 μM caused protein accumulation. In conclusion, deoxyelephantopin is unlikely a clinically significant hERG channel and I kr blocker. Copyright © 2017 Elsevier Ltd. All rights reserved.

hERG1 channels are overexpressed in glioblastoma multiforme and modulate VEGF secretion in glioblastoma cell lines

Science.gov (United States)

Masi, A; Becchetti, A; Restano-Cassulini, R; Polvani, S; Hofmann, G; Buccoliero, A M; Paglierani, M; Pollo, B; Taddei, G L; Gallina, P; Di Lorenzo, N; Franceschetti, S; Wanke, E; Arcangeli, A

2005-01-01

Recent studies have led to considerable advancement in our understanding of the molecular mechanisms that underlie the relentless cell growth and invasiveness of human gliomas. Partial understanding of these mechanisms has (1) improved the classification for gliomas, by identifying prognostic subgroups, and (2) pointed to novel potential therapeutic targets. Some classes of ion channels have turned out to be involved in the pathogenesis and malignancy of gliomas. We studied the expression and properties of K+ channels in primary cultures obtained from surgical specimens: human ether a gò-gò related (hERG)1 voltage-dependent K+ channels, which have been found to be overexpressed in various human cancers, and human ether a gò-gò-like 2 channels, that share many of hERG1's biophysical features. The expression pattern of these two channels was compared to that of the classical inward rectifying K+ channels, IRK, that are widely expressed in astrocytic cells and classically considered a marker of astrocytic differentiation. In our study, hERG1 was found to be specifically overexpressed in high-grade astrocytomas, that is, glioblastoma multiforme (GBM). In addition, we present evidence that, in GBM cell lines, hERG1 channel activity actively contributes to malignancy by promoting vascular endothelial growth factor secretion, thus stimulating the neoangiogenesis typical of high-grade gliomas. Our data provide important confirmation for studies proposing the hERG1 channel as a molecular marker of tumour progression and a possible target for novel anticancer therapies. PMID:16175187

Facies discrimination in a mixed fluvio-eolian setting using elemental whole rock geochemistry

DEFF Research Database (Denmark)

Svendsen, Johan; Friis, Henrik; Stollhofen, Harald

2007-01-01

-eolian successions. The method is developed on the modern fluvio-eolian sediments from the Skeleton Coast dune field, Namibia. The examined sediments comprise eight different facies types; eolian dune sands, inter dune fluvial channel sands, intra erg mass flow deposits, intra erg hyperconcentrated flow deposits......, fluvial channel sands, fluvial mud, lacustrine heterolithic sand and lacustrine heterolithic mud. The contrasting provenance of the fluvial and eolian sediments results in a distinct source fingerprint which can be discriminated using elemental whole rock geochemistry. Multivariate statistical technique...... performed on the geochemical data has enabled discrimination of seven of the eight facies types. Furthermore, the facies discrimination method allowed a quantitative estimate of the degree of fluvial reworking of eolian sand. We believe that the method presented here, when calibrated to a reference well...

Inter-layered clay stacks in Jurassic shales

Science.gov (United States)

Pye, K.; Krinsley, D. H.

1983-01-01

Scanning electron microscopy in the backscattered electron mode is used together with energy-dispersive X-ray microanalysis to show that Lower Jurassic shales from the North Sea Basin contain large numbers of clay mineral stacks up to 150 microns in size. Polished shale sections are examined to determine the size, shape orientation, textural relationships, and internal compositional variations of the clays. Preliminary evidence that the clay stacks are authigenic, and may have formed at shallow burial depths during early diagenesis, is presented.

Submarine sand ridges and sand waves in the eastern part of the China Sea

Science.gov (United States)

Wu, Ziyin; Li, Shoujun; Shang, Jihong; Zhou, Jieqiong; Zhao, Dineng; Liang, Yuyang

2016-04-01

Integrated with multi-beam and single-beam echo sounding data, as well as historical bathymetric data, submarine bathymetric maps of the eastern part of the China Sea, including the Bohai Sea, Huanghai Sea, and East China Sea, are constructed to systematically study submarine sand ridges and sand waves in the eastern part of the China Sea, combined with high-resolution seismic, sub-bottom profile and borehole data. Submarine sand ridges are extraordinarily developed in the eastern part of the China Sea, and 7 sand ridge areas can be divided from north to south, that is, the Laotieshan Channel sand ridge area in the Bohai Sea, the Korea Bay sand ridge area in the southern Huanghai Sea, the sand ridge area in the eastern Huanghai islands and the Huanghai Troughs, the Jianggang sand ridge area in the western Huanghai Sea, the sand ridge area in the East China Sea shelf, and the sand ridge and sand wave area in the Taiwan Strait and Taiwan Banks. The distribution area of the sand ridges and sand waves covers more than 450,000 km2, wherein ~10,000 km2 in the Bohai Bay, ~200,000 km2 in the Huanghai Sea, ~200,000 km2 in the East China Sea shelf, and ~40,000 km2 in the Taiwan Strait and Taiwan Banks, respectively. The great mass of sand ridges are distributed within water depth of 5-160 m, with a total length of over 160 km and a main width of 5-10 km. The inner structure of the sand ridges presents features of high-angle inclined beddings, with main lithology of sands, sand-mud alternations partly visible, and a small number of mud cores. Dating results indicate that the sand ridges in the eastern part of the China Sea are mainly developed in the Holocene. Sea-level variation dominates the sand ridge evolution in the eastern part of the China Sea since the LGM, and the sand ridges developed in the area of < 60m water depth are appeared in bad activity, meanwhile sand ridges with good activity are still developed in large scale.

ERG and GRG review of the draft of ''preliminary test plan for in situ testing from an exploratory shaft in salt - October 1983''

International Nuclear Information System (INIS)

Kalia, H.N.

1986-03-01

The Engineering Review Group (ERG) and Geologic Review Group (GRG) were established by the Office of Nuclear Waste Isolation (ONWI) to help evaluate engineering- and geologic-related issues in the US Department of Energy's nuclear waste repository program. The January 1984 meeting of the ERG and GRG reviewed the In Situ Test Plan (ISTP) titled ''Preliminary Test Plan for In Situ Testing From an Exploratory Shaft in Salt - October 1983.'' This report documents the ERG's and GRG's comments and recommendations on this subject and the ONWI responses to the specific points raised by the ERG and GRG. 6 refs., 2 figs., 1 tab

In Silico Predictions of hERG Channel Blockers in Drug Discovery

DEFF Research Database (Denmark)

Taboureau, Olivier; Sørensen, Flemming Steen

2011-01-01

The risk for cardiotoxic side effects represents a major problem in clinical studies of drug candidates and regulatory agencies have explicitly recommended that all new drug candidates should be tested for blockage of the human Ether-a-go-go Related-Gene (hERG) potassium channel. Indeed, several ...

Primary migration of Jurassic coal-derived oil in Santanghu basin

Energy Technology Data Exchange (ETDEWEB)

Zhang, W.; Zhong, N.; Ren, D. [China University of Mining and Technology, Beijing (China). Dept of Resource Exploitation Engineering

2000-11-01

It is known that the differential evolution of the multiple macerals results in 'oil generation by stage', and that 'early generation, early expulsion' is one of the preconditions for the efficient accumulation of the coal-derived oil. Based upon the study on the evolution of the physical properties, related to the hydrocarbon expulsion, of the Jurassic organic rock in Santanghu basin during the course of maturation, the mechanism of the primary migration of its coal-derived oil was discussed. The rapid loss of the inherent moisture in the organic rock was not accordant with the main generation stage of the coal-derived oil, so it was unrealistic that the oil migrated by dissolution in the expelled water. It is thought that the special forming mechanism of the continuous 'bitumen network' under the condition of over-pressure and an earlier history of primary migration may be essential to the Jurassic coal-derived oil in Santanghu basin. 17 refs., 4 figs.

Evaluation of ERG and SPINK1 by Immunohistochemical Staining and Clinicopathological Outcomes in a Multi-Institutional Radical Prostatectomy Cohort of 1067 Patients.

Directory of Open Access Journals (Sweden)

James D Brooks

Full Text Available Distinguishing between patients with early stage, screen detected prostate cancer who must be treated from those that can be safely watched has become a major issue in prostate cancer care. Identification of molecular subtypes of prostate cancer has opened the opportunity for testing whether biomarkers that characterize these subtypes can be used as biomarkers of prognosis. Two established molecular subtypes are identified by high expression of the ERG oncoprotein, due to structural DNA alterations that encode for fusion transcripts in approximately ½ of prostate cancers, and over-expression of SPINK1, which is purportedly found only in ERG-negative tumors. We used a multi-institutional prostate cancer tissue microarray constructed from radical prostatectomy samples with associated detailed clinical data and with rigorous selection of recurrent and non-recurrent cases to test the prognostic value of immunohistochemistry staining results for the ERG and SPINK1 proteins. In univariate analysis, ERG positive cases (419/1067; 39% were associated with lower patient age, pre-operative serum PSA levels, lower Gleason scores (≤ 3+4=7 and improved recurrence free survival (RFS. On multivariate analysis, ERG status was not correlated with RFS, disease specific survival (DSS or overall survival (OS. High-level SPINK1 protein expression (33/1067 cases; 3% was associated with improved RFS on univariate and multivariate Cox regression analysis. Over-expression of either protein was not associated with clinical outcome. While expression of ERG and SPINK1 proteins was inversely correlated, it was not mutually exclusive since 3 (0.28% cases showed high expression of both. While ERG and SPINK1 appear to identify discrete molecular subtypes of prostate cancer, only high expression of SPINK1 was associated with improved clinical outcome. However, by themselves, neither ERG nor SPINK1 appear to be useful biomarkers for prognostication of early stage prostate

Evaluation of ERG and SPINK1 by Immunohistochemical Staining and Clinicopathological Outcomes in a Multi-Institutional Radical Prostatectomy Cohort of 1067 Patients.

Science.gov (United States)

Brooks, James D; Wei, Wei; Hawley, Sarah; Auman, Heidi; Newcomb, Lisa; Boyer, Hilary; Fazli, Ladan; Simko, Jeff; Hurtado-Coll, Antonio; Troyer, Dean A; Carroll, Peter R; Gleave, Martin; Lance, Raymond; Lin, Daniel W; Nelson, Peter S; Thompson, Ian M; True, Lawrence D; Feng, Ziding; McKenney, Jesse K

2015-01-01

Distinguishing between patients with early stage, screen detected prostate cancer who must be treated from those that can be safely watched has become a major issue in prostate cancer care. Identification of molecular subtypes of prostate cancer has opened the opportunity for testing whether biomarkers that characterize these subtypes can be used as biomarkers of prognosis. Two established molecular subtypes are identified by high expression of the ERG oncoprotein, due to structural DNA alterations that encode for fusion transcripts in approximately ½ of prostate cancers, and over-expression of SPINK1, which is purportedly found only in ERG-negative tumors. We used a multi-institutional prostate cancer tissue microarray constructed from radical prostatectomy samples with associated detailed clinical data and with rigorous selection of recurrent and non-recurrent cases to test the prognostic value of immunohistochemistry staining results for the ERG and SPINK1 proteins. In univariate analysis, ERG positive cases (419/1067; 39%) were associated with lower patient age, pre-operative serum PSA levels, lower Gleason scores (≤ 3+4=7) and improved recurrence free survival (RFS). On multivariate analysis, ERG status was not correlated with RFS, disease specific survival (DSS) or overall survival (OS). High-level SPINK1 protein expression (33/1067 cases; 3%) was associated with improved RFS on univariate and multivariate Cox regression analysis. Over-expression of either protein was not associated with clinical outcome. While expression of ERG and SPINK1 proteins was inversely correlated, it was not mutually exclusive since 3 (0.28%) cases showed high expression of both. While ERG and SPINK1 appear to identify discrete molecular subtypes of prostate cancer, only high expression of SPINK1 was associated with improved clinical outcome. However, by themselves, neither ERG nor SPINK1 appear to be useful biomarkers for prognostication of early stage prostate cancer.

Sedimentary Provenance Constraints on the Middle Jurassic to Late Cretaceous Paleogeography of the Sichuan Basin, SW China

Science.gov (United States)

Li, Y.; He, D.; Li, D.; Lu, R.

2017-12-01

Sedimentary provenance of the Middle Jurassic to Late Cretaceous sediments in the Sichuan Basin is constrained by sandstone petrology and detrital zircon U-Pb geochronology, which provides critical insights into mid-late Mesozoic paleogeographic evolution of the Sichuan Basin. Petrographic analyses of 22 sandstone samples indicate moderate to high mature sediments and are primarily derived from cratonic or recycled sources. U-Pb age data for the Middle Jurassic to Late Cretaceous detrital zircons generally show populations at 130-200, 200-330, 400-490, 680-890, 1730-1960, and 2360-2600 Ma, with up-section variations. The Middle Jurassic sediments contain a relatively high density of 1.85 and 2.5 Ga zircons and a low density of the 800 Ma zircons, which are consistent with derivation mainly from the Songpan-Ganzi terrane and the South Qinling belt, and secondarily from the Western Jiangnan Orogen. The Late Jurassic and Early Cretaceous sedimentation with a scattered age distribution shared common multiple-source to sink systems that were predominantly draining towards the south and southeast, but increasingly drained southward, and were later disrupted by a synchronous northeastward drainage capture. Late Cretaceous sediments have a distinct reduction in Block.

MiR-17-5p impairs trafficking of H-ERG K+ channel protein by targeting multiple er stress-related chaperones during chronic oxidative stress.

Directory of Open Access Journals (Sweden)

Qi Wang

Full Text Available BACKGROUND: To investigate if microRNAs (miRNAs play a role in regulating h-ERG trafficking in the setting of chronic oxidative stress as a common deleterious factor for many cardiac disorders. METHODS: We treated neonatal rat ventricular myocytes and HEK293 cells with stable expression of h-ERG with H2O2 for 12 h and 48 h. Expression of miR-17-5p seed miRNAs was quantified by real-time RT-PCR. Protein levels of chaperones and h-ERG trafficking were measured by Western blot analysis. Luciferase reporter gene assay was used to study miRNA and target interactions. Whole-cell patch-clamp techniques were employed to record h-ERG K(+ current. RESULTS: H-ERG trafficking was impaired by H2O2 after 48 h treatment, accompanied by reciprocal changes of expression between miR-17-5p seed miRNAs and several chaperones (Hsp70, Hsc70, CANX, and Golga2, with the former upregulated and the latter downregulated. We established these chaperones as targets for miR-17-5p. Application miR-17-5p inhibitor rescued H2O2-induced impairment of h-ERG trafficking. Upregulation of endogenous by H2O2 or forced miR-17-5p expression either reduced h-ERG current. Sequestration of AP1 by its decoy molecule eliminated the upregulation of miR-17-5p, and ameliorated impairment of h-ERG trafficking. CONCLUSIONS: Collectively, deregulation of the miR-17-5p seed family miRNAs can cause severe impairment of h-ERG trafficking through targeting multiple ER stress-related chaperones, and activation of AP1 likely accounts for the deleterious upregulation of these miRNAs, in the setting of prolonged duration of oxidative stress. These findings revealed the role of miRNAs in h-ERG trafficking, which may contribute to the cardiac electrical disturbances associated with oxidative stress.

MiR-17-5p impairs trafficking of H-ERG K+ channel protein by targeting multiple er stress-related chaperones during chronic oxidative stress.

Science.gov (United States)

Wang, Qi; Hu, Weina; Lei, Mingming; Wang, Yong; Yan, Bing; Liu, Jun; Zhang, Ren; Jin, Yuanzhe

2013-01-01

To investigate if microRNAs (miRNAs) play a role in regulating h-ERG trafficking in the setting of chronic oxidative stress as a common deleterious factor for many cardiac disorders. We treated neonatal rat ventricular myocytes and HEK293 cells with stable expression of h-ERG with H2O2 for 12 h and 48 h. Expression of miR-17-5p seed miRNAs was quantified by real-time RT-PCR. Protein levels of chaperones and h-ERG trafficking were measured by Western blot analysis. Luciferase reporter gene assay was used to study miRNA and target interactions. Whole-cell patch-clamp techniques were employed to record h-ERG K(+) current. H-ERG trafficking was impaired by H2O2 after 48 h treatment, accompanied by reciprocal changes of expression between miR-17-5p seed miRNAs and several chaperones (Hsp70, Hsc70, CANX, and Golga2), with the former upregulated and the latter downregulated. We established these chaperones as targets for miR-17-5p. Application miR-17-5p inhibitor rescued H2O2-induced impairment of h-ERG trafficking. Upregulation of endogenous by H2O2 or forced miR-17-5p expression either reduced h-ERG current. Sequestration of AP1 by its decoy molecule eliminated the upregulation of miR-17-5p, and ameliorated impairment of h-ERG trafficking. Collectively, deregulation of the miR-17-5p seed family miRNAs can cause severe impairment of h-ERG trafficking through targeting multiple ER stress-related chaperones, and activation of AP1 likely accounts for the deleterious upregulation of these miRNAs, in the setting of prolonged duration of oxidative stress. These findings revealed the role of miRNAs in h-ERG trafficking, which may contribute to the cardiac electrical disturbances associated with oxidative stress.

Amphibious flies and paedomorphism in the Jurassic period.

Science.gov (United States)

Huang, Diying; Nel, André; Cai, Chenyang; Lin, Qibin; Engel, Michael S

2013-03-07

The species of the Strashilidae (strashilids) have been the most perplexing of fossil insects from the Jurassic period of Russia and China. They have been widely considered to be ectoparasites of pterosaurs or feathered dinosaurs, based on the putative presence of piercing and sucking mouthparts and hind tibio-basitarsal pincers purportedly used to fix onto the host's hairs or feathers. Both the supposed host and parasite occur in the Daohugou beds from the Middle Jurassic epoch of China (approximately 165 million years ago). Here we analyse the morphology of strashilids from the Daohugou beds, and reach markedly different conclusions; namely that strashilids are highly specialized flies (Diptera) bearing large membranous wings, with substantial sexual dimorphism of the hind legs and abdominal extensions. The idea that they belong to an extinct order is unsupported, and the lineage can be placed within the true flies. In terms of major morphological and inferred behavioural features, strashilids resemble the recent (extant) and relict members of the aquatic fly family Nymphomyiidae. Their ontogeny are distinguished by the persistence in adult males of larval abdominal respiratory gills, representing a unique case of paedomorphism among endopterygote insects. Adult strashilids were probably aquatic or amphibious, shedding their wings after emergence and mating in the water.

Fontainebleau Sand

DEFF Research Database (Denmark)

Leth, Caspar Thrane

2006-01-01

The report is a summary of results from laboratory tests in the geotechncial research group on Fontainebleau sand.......The report is a summary of results from laboratory tests in the geotechncial research group on Fontainebleau sand....

Narrative depositional systems on the area with Nalinggou the relationship between uranium mineralization

International Nuclear Information System (INIS)

Meng Rui

2012-01-01

For sandstone-type uranium deposits in China began to research the late 1950s, 1990s in-situ leachable sand stone-type uranium deposits has become China's industrial significance of the important uranium deposits type. The sedimentary system analysis in in-situ leachable sandstone-type uranium deposit research plays a very important role. Based on the sedimentary system analysis and sequence stratigraphy as the basis, the area of Nalinggou on ridge middle Jurassic straight ROM group sedimentary system characteristics, middle Jurassic straight ROM group of sand body thickness, the area on ridge aspects of river channel exhibition cloth direction studied that: (1) river space distribution direction control the sand body cloth of the spatial distribution, then affects fu cloth of the spatial distribution of uranium sand body; (2) the evolution of the sedimentary environment created a good sand sequence distribution and enrichment conditions intercalation, be helpful for interlayer oxidation effect; (3) sequence of sedimentary control three layer structure lithology space combination. (authors)

The Jurassic-Cretaceous basaltic magmatism of the Oued El-Abid syncline (High Atlas, Morocco): Physical volcanology, geochemistry and geodynamic implications

Science.gov (United States)

Bensalah, Mohamed Khalil; Youbi, Nasrrddine; Mata, João; Madeira, José; Martins, Línia; El Hachimi, Hind; Bertrand, Hervé; Marzoli, Andrea; Bellieni, Giuliano; Doblas, Miguel; Font, Eric; Medina, Fida; Mahmoudi, Abdelkader; Beraâouz, El Hassane; Miranda, Rui; Verati, Chrystèle; De Min, Angelo; Ben Abbou, Mohamed; Zayane, Rachid

2013-05-01

Basaltic lava flows, dykes and sills, interbedded within red clastic continental sedimentary sequences (the so called "Couches Rouges") are widespread in the Oued El-Abid syncline. They represent the best candidates to study the Jurassic-Cretaceous magmatism in the Moroccan High Atlas. The volcanic successions were formed during two pulses of volcanic activity, represented by the Middle to Upper Jurassic basaltic sequence B1 (1-4 eruptions) and the Lower Cretaceous basaltic sequence B2 (three eruptions). Whether belonging to the B1 or B2, the lava flows present morphology and internal structures typical of inflated pahoehoe. Our geochemical data show that, at least for Jurassic magmatism, the dykes, and sills cannot be considered as strictly representing the feeders of the sampled lava flows. The Middle to Upper Jurassic pulse is moderately alkaline in character, while the Lower Cretaceous one is transitional. Crustal contamination plays a minor role in the petrogenesis of these magmas, which were generated by variable partial melting degrees of a garnet-bearing mantle source. Magmatism location was controlled by pre-existing Hercynian fault systems reactivated during a Middle to Upper Jurassic-Cretaceous rifting event. The associated lithospheric stretching induced melting, by adiabatic decompression, of enriched low-solidus infra-lithospheric domains.

New evidence for mammaliaform ear evolution and feeding adaptation in a Jurassic ecosystem

Science.gov (United States)

Luo, Zhe-Xi; Meng, Qing-Jin; Grossnickle, David M.; Liu, Di; Neander, April I.; Zhang, Yu-Guang; Ji, Qiang

2017-08-01

Stem mammaliaforms are forerunners to modern mammals, and they achieved considerable ecomorphological diversity in their own right. Recent discoveries suggest that eleutherodontids, a subclade of Haramiyida, were more species-rich during the Jurassic period in Asia than previously recognized. Here we report a new Jurassic eleutherodontid mammaliaform with an unusual mosaic of highly specialized characteristics, and the results of phylogenetic analyses that support the hypothesis that haramiyidans are stem mammaliaforms. The new fossil shows fossilized skin membranes that are interpreted to be for gliding and a mandibular middle ear with a unique character combination previously unknown in mammaliaforms. Incisor replacement is prolonged until well after molars are fully erupted, a timing pattern unique to most other mammaliaforms. In situ molar occlusion and a functional analysis reveal a new mode of dental occlusion: dual mortar-pestle occlusion of opposing upper and lower molars, probably for dual crushing and grinding. This suggests that eleutherodontids are herbivorous, and probably specialized for granivory or feeding on soft plant tissues. The inferred dietary adaptation of eleutherodontid gliders represents a remarkable evolutionary convergence with herbivorous gliders in Theria. These Jurassic fossils represent volant, herbivorous stem mammaliaforms associated with pre-angiosperm plants that appear long before the later, iterative associations between angiosperm plants and volant herbivores in various therian clades.

MicroRNA-224 targets ERG2 and contributes to malignant progressions of meningioma

International Nuclear Information System (INIS)

Wang, Maomao; Deng, Xiaodong; Ying, Qi; Jin, Tingyan; Li, Ming; Liang, Chong

2015-01-01

MicroRNA-224 is overexpressed in various malignant tumors with poor prognosis, which plays a critical role in biological processes including cell proliferation, apoptosis and several developmental and physiological progressions. However, the potential association between miR-224 and clinical outcome in patients with meningiomas remains unknown. Here, we investigate miR-224 expression and biological functions in meningiomas. MiR-224 expression was measured by Northern blot analysis and quantitative reverse transcription-polymerase chain reaction (qRT-PCR) in meningioma and normal brain tissues. Kaplan–Meier analysis and Cox regression analysis were used to exam its correlation with clinicopathological features and prognostic value. The biological effects of miR-224 on the cell proliferation and apoptosis in meningioma cells were examined by MTT assay and apoptosis assay. We found the expression levels of miR-224 were significantly higher in meningioma tissues than that in normal brain, positively correlated with advanced pathological grade. Kaplan–Meier analysis indicated that meningioma patients with low miR-224 expression exhibited significantly prolonged overall and recurrence-free survival. Furthermore, we demonstrated that ERG2 was an identical candidate target gene of MiR-224 in vitro. Our results indicated that downregulation of miR-224 suppressed cell growth and resulted in the enhancement of cell apoptosis through activation of the ERG2-BAK-induced apoptosis pathway. Our findings imply the miR-224 expression could predict the overall survival and recurrence-free survival of patients with meningioma and it might be a promising therapeutic target for treating malignant meningiomas. - Highlights: • MiR-224 expression is correlates with prognosis in meningioma patients. • ERG2 is a novel downstream target of miR-224. • MiR-224 suppressed cell growth and enhanced apoptosis in IOMM-Lee and CH157 cells. • MiR-224 is an upstream regulator of the ERG2

Contribution of Interstitial Deletion of 21q22.2-3 per se to Prostate Cancer Progression in Tumors Harboring TMPRSS2-ERG Translocations

Science.gov (United States)

2015-12-01

harboring TMPRSS2- ERG translocations PRINCIPAL INVESTIGATOR: Yan Dong CONTRACTING ORGANIZATION: Tulane University New Orleans, LA 70112...0485 to prostate cancer progression in tumors harboring TMPRSS2- ERG translocations 5b. GRANT NUMBER W81XWH-14-1-0485 5c. PROGRAM ELEMENT NUMBER...Unlimited 13. SUPPLEMENTARY NOTES 14. ABSTRACT TMPRSS2- ERG gene fusions are present in close to 50% of human prostate cancers. Approximately half of the

Triassic-Jurassic pteridosperms of Australasia: speciation, diversity and decline

Energy Technology Data Exchange (ETDEWEB)

Pattemore, G. A.; Rigby, J. F.; Playford, G.

2015-07-01

Pteridosperms are preserved abundantly in the Gondwanan Triassic, with many species exhibiting consider- able morphological variation that has been attributed to a hybridization model of speciation. This is an improbable explanation given that hybridization is very rare in gymnosperms. Allopatric speciation resulting from geographic and climatic provincialism is a more likely explanation for the morphological diversity which is well represented in Anisian Norian (Middle and Upper Triassic) floras of Australasia and elsewhere in Gondwana. Most specimens are distributed among three families: Umkomasiaceae, Peltaspermaceae and Matatiellaceae. These families, together with other possibly pteridospermous genera, are reviewed herein. Diversity in these families apparently declined by the Rhaetian and they did not persist into the Gondwanan post-Triassic. Australasian post-Triassic strata contain remarkably different floral assemblages to those of the Triassic. No fructifications are clearly pteridospermous and no remains show any obvious relationship with pteridosperms of the Gondwanan Triassic. Caytonialean fructifications are not known in Australasian strata; however, associated foliage has been reported from the Eastern Gondwanan Upper Triassic through Middle Jurassic including Australia. Much fern-like foliage, claimed to be pteridospermous from the Lower Jurassic through Eocene of Eastern Gondwana, lacks supporting evidence of such affiliation. (Author)

Possible markers of the Jurassic/Cretaceous boundary in the Mediterranean Tethys: A review and state of art

Directory of Open Access Journals (Sweden)

Jozef Michalík

2011-10-01

Full Text Available During the last decades, several integrated studies of Tethyan Jurassic/Cretaceous boundary sections from different countries were published with the objective to indicate problems for the selection of biological, chemical or physical markers suitable for identification of the Jurassic/Cretaceous boundary – the only system boundary within the Phanerozoic still not fixed by GSSP. Drawing the boundary between the Jurassic and Cretaceous systems is a matter of global scale discussions. The problem of proposing possible J/K boundary stratotypes results from lack of a global index fossils, global sea level drop, paleogeographic changes causing development of isolated facies areas, as well as from the effect of Late Cimmerian Orogeny. This contribution summarizes and comments data on J/K boundary interval obtained from several important Tethyan sections and shows still existing problems and discrepancies in its determination.

Bioerosion and encrustation: Evidences from the Middle ‒ Upper Jurassic of central Saudi Arabia

Science.gov (United States)

El-Hedeny, Magdy; El-Sabbagh, Ahmed; Al Farraj, Saleh

2017-10-01

The Middle ‒ Upper Jurassic hard substrates of central Saudi Arabia displayed considerable signs of bioerosion and encrustations. They include organic (oysters, other bivalves, gastropods, corals and brachiopods) and an inorganic carbonate hardground that marks the boundary between the Middle Jurassic Tuwaiq Mountain Limestone and the Upper Jurassic Hanifa Formation. Traces of bioerosion in organic substrates include seven ichnotaxa produced by bivalves (Gastrochaenolites Leymerie, 1842), polychaete annelids (Trypanites Mägdefrau, 1932; MaeandropolydoraVoigt, 1965 and CaulostrepsisClarke, 1908), sponges (Entobia Bronn, 1837), acrothoracican cirripedes (Rogerella Saint-Seine, 1951), gastropods (Oichnus Bromley, 1981) and probable ?Centrichnus cf. eccentricus. The encrusting epifauna on these substrates consist of several organisms, including oysters, serpulid worms, corals and foraminifera. In contrast, the carbonate hardground was only bioeroded by Gastrochaenolite, Trypanites and Entobia. Epibionts on this hardground include ;Liostrea Douvillé, 1904-type; oysters, Nanogyra nana Sowerby, 1822 and serpulids. In general, bioerosion and encrustation are less diversified in hardground than in organic substrates, indicating a long time of exposition of organic substrates with slow to moderate rate of deposition in a restricted marine environment. Both organic and inorganic commuinities are correlated with those of other equatorial, subtropical and temperate equivalents.

Study of Black Sand Particles from Sand Dunes in Badr, Saudi Arabia Using Electron Microscopy

Directory of Open Access Journals (Sweden)

Haider Abbas Khwaja

2015-08-01

Full Text Available Particulate air pollution is a health concern. This study determines the microscopic make-up of different varieties of sand particles collected at a sand dune site in Badr, Saudi Arabia in 2012. Three categories of sand were studied: black sand, white sand, and volcanic sand. The study used multiple high resolution electron microscopies to study the morphologies, emission source types, size, and elemental composition of the particles, and to evaluate the presence of surface “coatings or contaminants” deposited or transported by the black sand particles. White sand was comprised of natural coarse particles linked to wind-blown releases from crustal surfaces, weathering of igneous/metamorphic rock sources, and volcanic activities. Black sand particles exhibited different morphologies and microstructures (surface roughness compared with the white sand and volcanic sand. Morphological Scanning Electron Microscopy (SEM and Laser Scanning Microscopy (LSM analyses revealed that the black sand contained fine and ultrafine particles (50 to 500 nm ranges and was strongly magnetic, indicating the mineral magnetite or elemental iron. Aqueous extracts of black sands were acidic (pH = 5.0. Fe, C, O, Ti, Si, V, and S dominated the composition of black sand. Results suggest that carbon and other contaminant fine particles were produced by fossil-fuel combustion and industrial emissions in heavily industrialized areas of Haifa and Yanbu, and transported as cloud condensation nuclei to Douf Mountain. The suite of techniques used in this study has yielded an in-depth characterization of sand particles. Such information will be needed in future environmental, toxicological, epidemiological, and source apportionment studies.

Chemical Remagnetization of Jurassic Carbonates and a Primary Paleolatitude of Lower Cretaceous Volcaniclastic Rocks of the Tibetan Himalaya

Science.gov (United States)

Huang, W.; Van Hinsbergen, D. J. J.; Dekkers, M. J.; Garzanti, E.; Dupont Nivet, G.; Lippert, P. C.; Li, X.; Maffione, M.; Langereis, C. G.; Hu, X.; Guo, Z.; Kapp, P. A.

2014-12-01

Paleolatitudes for the Tibetan Himalaya Zone based on paleomagnetic inclinations provide kinematic constraints of the passive northern Indian margin and the extent of 'Greater India' before the India-Asia collision. Here, we present a paleomagnetic investigation of the Jurassic (carbonates) to Lower Cretaceous (volcaniclastic rocks) Wölong section of the Tibetan Himalaya in the Everest region. The carbonates yield positive fold tests, suggesting that the remanent magnetizations have a pre-folding origin. However, detailed paleomagnetic analyses, rock magnetic tests, end-member modeling of acquisition curves of isothermal remanent magnetization, and petrographic studies reveal that the magnetic carrier of the Jurassic carbonates is authigenic magnetite, whereas the dominant magnetic carrier of the Lower Cretaceous volcaniclastic rocks is detrital magnetite. We conclude that the Jurassic carbonates were remagnetized, whereas the Lower Cretaceous volcaniclastics retain a primary remanence. We hypothesize that remagnetization of the Jurassic carbonates was probably caused by the oxidation of early diagenetic pyrite to magnetite within the time interval at ~86-84 Ma during the latest Cretaceous Normal Superchron and earliest deposition of Cretaceous oceanic red beds in the Tibetan Himalaya. The remagnetization of the limestones prevents determining the size of 'Greater India' during Jurassic time. Instead, a paleolatitude of the Tibetan Himalaya of 23.8±2.1° S at ~86-84 Ma is suggested. This value is lower than the expected paleolatitude of India from apparent polar wander path (APWP). The volcaniclastic rocks with the primary remanence, however, yielded a Lower Cretaceous paleolatitude of Tibetan Himalaya of 55.5±3° S, fitting well with the APWP of India.

ERG and FLI1 binding sites demarcate targets for aberrant epigenetic regulation by AML1-ETO in acute myeloid leukemia

NARCIS (Netherlands)

Martens, Joost H. A.; Mandoli, Amit; Simmer, Femke; Wierenga, Bart-Jan; Saeed, Sadia; Singh, Abhishek A.; Altucci, Lucia; Vellenga, Edo; Stunnenberg, Hendrik G.

2012-01-01

ERG and FLI1 are closely related members of the ETS family of transcription factors and have been identified as essential factors for the function and maintenance of normal hematopoietic stem cells. Here genome-wide analysis revealed that both ERG and FLI1 occupy similar genomic regions as AML1-ETO

First American record of the Jurassic ichnogenus Deltapodus and a review of the fossil record of stegosaurian footprints

DEFF Research Database (Denmark)

Milàn, Jesper; Chiappe, Luis M

2009-01-01

We describe the first American stegosaur track of the ichnospecies Deltapodus brodricki, collected in the Upper Jurassic Morrison Formation of San Juan County, southeastern Utah, United States. The track is preserved as a natural cast on the underside of a slab of fluvial sandstone and consists o...... and highlights the similarities between the Late Jurassic dinosaur faunas of North America and those of Western Europe....

New generation expandable sand screens

OpenAIRE

Syltøy, Christer

2014-01-01

Master's thesis in Petroleum engineering This thesis aims to give a general insight into sand control and various sorts of sand control measures and applications of sand control tools. Special focus will be given to expandable sand screens – a technology which came about in the late 1990’s through the use of flexible, expandable tubulars as base pipe in sand screens. More specifically Darcy’s Hydraulic Endurance Screens, a compliant sand screen system using hydraulic activation, and the fu...

Saltation of non-spherical sand particles.

Directory of Open Access Journals (Sweden)

Zhengshi Wang

Full Text Available Saltation is an important geological process and the primary source of atmospheric mineral dust aerosols. Unfortunately, no studies to date have been able to precisely reproduce the saltation process because of the simplified theoretical models used. For example, sand particles in most of the existing wind sand movement models are considered to be spherical, the effects of the sand shape on the structure of the wind sand flow are rarely studied, and the effect of mid-air collision is usually neglected. In fact, sand grains are rarely round in natural environments. In this paper, we first analyzed the drag coefficients, drag forces, and starting friction wind speeds of sand grains with different shapes in the saltation process, then established a sand saltation model that considers the coupling effect between wind and the sand grains, the effect of the mid-air collision of sand grains, and the effect of the sand grain shape. Based on this model, the saltation process and sand transport rate of non-spherical sand particles were simulated. The results show that the sand shape has a significant impact on the saltation process; for the same wind speed, the sand transport rates varied for different shapes of sand grains by as much as several-fold. Therefore, sand shape is one of the important factors affecting wind-sand movement.

Vacancy-ordering effects in AlB2-type ErGe2 - x(0.4 < x < or = 0.5).

Science.gov (United States)

Christensen, Jeppe; Lidin, Sven; Malaman, Bernard; Venturini, Gerard

2008-06-01

In the Er-Ge system, the compostion range ErGe(2) to Er(2)Ge(3) has been investigated. Eight samples were produced by arc melting of the elements, and analyzed using X-ray powder diffraction. Nine crystal structures were found to be present in the samples. The structures are described as a homologous series and presented within the superspace formalism using the superspace group X2/m(alpha0gamma)0s, X representing the centring vector ((1/2), (1/2), 0, (1/2)). In this description the modulation vector q = (alphaa* + gammac*) is shown to be a direct measure of the Ge content as ErGe(2 - alpha) (alpha falls in the range 1\\over 3 to (1/2)). The large composition range is achieved by extended vacancy ordering in the planar 6(3) net of Ge with subsequent relaxation.

Dinosaur tracks in Lower Jurassic coastal plain sediments (Sose Bugt Member, Rønne Formation) on Bornholm, Denmark

DEFF Research Database (Denmark)

Clemmensen, Lars B; Milàn, Jesper; Pedersen, Gunver K

2014-01-01

Fluvial palaeochannels of coastal plain sediments of the Lower Jurassic Sose Bugt Member of the Rønne Formation exposed in the coastal cliffs at Sose Bugt, Bornholm, contain abundant dinosaur or other large vertebrate tracks in the form of deformation structures exposed in vertical section...... track. Contemporary Upper Triassic – Lower Jurassic strata from southern Sweden and Poland contain a diverse track fauna, supporting our interpretation. This is the earliest evidence of dinosaur activity in Denmark....

AN APPROACH TO PROVENANCE, TECTONIC AND REDOX CONDITIONS OF JURASSIC-CRETACEOUS AKKUYU FORMATION, CENTRAL TAURIDS, TURKEY

Directory of Open Access Journals (Sweden)

Ali SARI

2012-06-01

Full Text Available - Late Jurassic-Early Cretaceous Akkuyu formation was deposited in a marine carbonate platform in Central Tarurids. The organic material of the unit is composed of Type III kerogen which is woody material transported from the land. Late Jurassic- Early Cretaceous is an important period which great anoxic events in deep sea bottom occurred due to the primary organic productivity in global sea surface. Use of several trace elements values (Ni, V, U, Cr, Co, Th revealed that Late Jurassic-Early Cretaceous Akkuyu formation shows oxic, disoxic and anoxic paleoredox conditions. In this period the primary productivity was considerably high. Examination of specimen derived from Akkuyu formation revealed that there exists a very good positive relationship between the major oxides of Al2O3, SiO2, Fe2O3, TiO2, and K2O. These combinations of major oxides indicate a detrital origin of source rock. Chemical weathering evaluations of Central Taurids in the Jurassic-Cretaceous period indicated moderate and strong weathering of source rock. K2O/Na2O versus SiO2; SiO2/Al2O3 versus K2O/Na2O; Al2O3/ SiO2 versus Fe2O3 + MgO ve TiO2 versus Fe2O3 + MgO diagrams indicated that Akkuyu formation was deposited along active and/or passive continental margin and derived from basalt and basalt+granite mixed rocks.

Early Jurassic extensional inheritance in the Lurestan region of the Zagros fold-and-thrust belt, Iran.

Science.gov (United States)

Tavani, Stefano; Parente, Mariano; Vitale, Stefano; Puzone, Francesco; Erba, Elisabetta; Bottini, Cinzia; Morsalnejad, Davoud; Mazzoli, Stefano

2017-04-01

It has long been recognized that the tectonic architecture of the Zagros mountain belt was strongly controlled by inherited structures previously formed within the Arabian plate. These preexisting features span in age from the pre-Cambrian to the Mesozoic, showing different trends and deformation styles. Yet, these structures are currently not fully understood. This uncertainty is partly related with the paucity of exposures, which rarely allows a direct observation of these important deformation features. The Lurestan Province of Iran provides a remarkable exception, since it is one of the few places of the Zagros mountain belt where exposures of Triassic and Jurassic rocks are widespread. In this area we carried out structural observations on Mesozoic extensional structures developed at the southern margin of the Neo-Tethyan basin. Syn-sedimentary extensional faults are hosted within the Triassic-Cretaceous succession, being particularly abundant in the Jurassic portion of the stratigraphy. Early to Middle Jurassic syn-sedimentary faults are observed in different paleogeographic domains of the area, and their occurrence is coherent with the subsequent transition from shallow-water to deep-sea basin environments, observed in a wide portion of the area. Most of the thrusts exposed in the area may indeed be interpreted as reactivated Jurassic extensional faults, or as reverse faults whose nucleation was controlled by the location of preexisting normal faults, as a result of positive inversion during crustal shortening and mountain building.

Functional and Morphological Evaluation of Traumatized Eyes With Berlin's Edema Affecting the Macula Using mfERG, Microperimetry, and SD-OCT.

Science.gov (United States)

Boss, Joseph Daniel; Tosi, Joaquin; Glybina, Inna; Tewari, Asheesh; Abrams, Gary W

2017-02-01

To describe the structural and functional changes that occur in traumatic Berlin's edema involving the macula through assessment with multifocal electroretinogram (mfERG), microperimetry, fundus photography, and spectral-domain optical coherence tomography (SD-OCT). Retrospective case series of five eyes from four patients with macular traumatic Berlin's edema. Patients underwent baseline mfERG (three eyes), MP1 microperimetry (three eyes), fundus photography (five eyes), and SD-OCT (five eyes). All eyes with Berlin's edema showed abnormal findings on baseline SD-OCT, including disruption and fragmentation of the inner segment/ outer segment layer. In two patients with unilateral blunt ocular trauma who underwent mfERG, there was complete loss of the foveal peak in affected eyes. All three eyes that underwent microperimetry showed depressed retinal sensitivity in the area of Berlin's edema. SD-OCT, microperimetry, and mfERG can be used to help diagnose, stratify traumatic severity, and follow structural and functional progression over time in patients with Berlin's edema. [Ophthalmic Surg Lasers Imaging Retina. 2017;48:114-121.]. Copyright 2017, SLACK Incorporated.

The Influence of Brightness on Functional Assessment by mfERG: A Study on Scaffolds Used in Retinal Cell Transplantation in Pigs

Directory of Open Access Journals (Sweden)

A. T. Christiansen

2012-01-01

Full Text Available To determine the effect of membrane brightness on multifocal electroretinograms (mfERGs, we implanted poly lactic-co-glycolic acid (PLGA membranes in the subretinal space of 11 porcine eyes. We compared membranes with their native shiny white color with membranes that were stained with a blue dye (Brilliant Blue. Histological and electrophysiological evaluation of the overlying retina was carried out 6 weeks after implantation. Histologically, both white and blue membranes degraded in a spongiform manner leaving a disrupted outer retina with no preserved photoreceptor segments. Multifocal ERG revealed the white membranes to have a significantly higher P1-amplitude ratio than the blue (P=0.027, and a correlation between brightness ratio and P1-amplitude ratio was found (r=0.762. Based on our findings, we conclude that bright subretinal objects can produce normal mfERG amplitude ratios even when the adjacent photoreceptors are missing. Functional assessment with mfERG in scaffold implant studies should therefore be evaluated with care.

Regional and temporal variability of melts during a Cordilleran magma pulse: Age and chemical evolution of the jurassic arc, eastern mojave desert, California

Science.gov (United States)

Barth, A.P.; Wooden, J.L.; Miller, David; Howard, Keith A.; Fox, Lydia; Schermer, Elizabeth R.; Jacobson, C.E.

2017-01-01

Intrusive rock sequences in the central and eastern Mojave Desert segment of the Jurassic Cordilleran arc of the western United States record regional and temporal variations in magmas generated during the second prominent pulse of Mesozoic continental arc magmatism. U/Pb zircon ages provide temporal control for describing variations in rock and zircon geochemistry that reflect differences in magma source components. These source signatures are discernible through mixing and fractionation processes associated with magma ascent and emplacement. The oldest well-dated Jurassic rocks defining initiation of the Jurassic pulse are a 183 Ma monzodiorite and a 181 Ma ignimbrite. Early to Middle Jurassic intrusive rocks comprising the main stage of magmatism include two high-K calc-alkalic groups: to the north, the deformed 183–172 Ma Fort Irwin sequence and contemporaneous rocks in the Granite and Clipper Mountains, and to the south, the 167–164 Ma Bullion sequence. A Late Jurassic suite of shoshonitic, alkali-calcic intrusive rocks, the Bristol Mountains sequence, ranges in age from 164 to 161 Ma and was emplaced as the pulse began to wane. Whole-rock and zircon trace-element geochemistry defines a compositionally coherent Jurassic arc with regional and secular variations in melt compositions. The arc evolved through the magma pulse by progressively greater input of old cratonic crust and lithospheric mantle into the arc magma system, synchronous with progressive regional crustal thickening.

A new spelaeogriphacean (Crustacea: Peracarida) from the Upper Jurassic of China

NARCIS (Netherlands)

Yan-bin, Shen; Taylor, Rod S.; Schram, Frederick R.

1998-01-01

A new monotypic genus of Spelaeogriphacea is described from the Upper Jurassic of Liaoning Province, north-east China. This new genus and species brings the number of known spelaeogriphacean taxa to four, the others being two recent forms from Brazil and South Africa, and one from the Carboniferous

Association of TMPRSS2-ERG gene fusion with clinical characteristics and outcomes: results from a population-based study of prostate cancer

International Nuclear Information System (INIS)

FitzGerald, Liesel M; Cox, Michael E; Ostrander, Elaine A; Stanford, Janet L; Huntsman, David G; Agalliu, Ilir; Johnson, Karynn; Miller, Melinda A; Kwon, Erika M; Hurtado-Coll, Antonio; Fazli, Ladan; Rajput, Ashish B; Gleave, Martin E

2008-01-01

The presence of the TMPRSS2-ERG fusion gene in prostate tumors has recently been associated with an aggressive phenotype, as well as recurrence and death from prostate cancer. These associations suggest the hypothesis that the gene fusion may be used as a prognostic indicator for prostate cancer. In this study, fluorescent in situ hybridization (FISH) assays were used to assess TMPRSS2-ERG fusion status in a group of 214 prostate cancer cases from two population-based studies. The FISH assays were designed to detect both fusion type (deletion vs. translocation) and the number of fusion copies (single vs. multiple). Genotyping of four ERG and one TMPRSS2 SNPs using germline DNA was also performed in a sample of the cases (n = 127). Of the 214 tumors scored for the TMPRSS2-ERG fusion, 64.5% were negative and 35.5% were positive for the fusion. Cases with the TMPRSS2-ERG fusion did not exhibit reduced prostate cancer survival (HR = 0.92, 95% CI = 0.22–3.93), nor was there a significant difference in cause-specific survival when stratifying by translocation or deletion (HR = 0.84, 95% CI = 0.23–3.12) or by the number of retained fusion copies (HR = 1.22, 95% CI = 0.45–3.34). However, evidence for reduced prostate cancer-specific survival was apparent in those cases whose tumor had multiple copies of the fusion. The variant T allele of the TMPRSS2 SNP, rs12329760, was positively associated with TMPRSS2-ERG fusion by translocation (p = 0.05) and with multiple copies of the gene fusion (p = 0.03). If replicated, the results presented here may provide insight into the mechanism by which the TMPRSS2-ERG gene fusion arises and also contribute to diagnostic evaluations for determining the subset of men who will go on to develop metastatic prostate cancer

Jurassic animals and algae in the flooring of Our Lady of Sorrows Church in Poznań

Directory of Open Access Journals (Sweden)

Antczak Mateusz

2015-12-01

Full Text Available The flooring of Our Lady of Sorrows Church in Poznań is made of Jurassic rocks from the Świętokrzyskie Mountains (also known as Holy Cross Mountains and contain abundant marine invertebrate fossils: sponges, bivalves, brachiopods, various families of cephalopods, etc. Some of them can be identified to the genus level. The fossils make it possible to describe the environment and ecosystem of the Jurassic sea and biostratigraphy of the sediment. There are also some significant inorganic structures, which suggest post-diagenetic tectonic movements.

Early Jurassic Carbon and Sodium Sequestration in a CAMP basalt flow

Science.gov (United States)

Block, K. A.; Puffer, J. H.

2017-12-01

The initial HTQ-type CAMP Orange Mountain Basalt flow, as well as related pillowed flows and the overlying Preakness flows, locally underwent substantial and well documented albitization, chloritization, and sulphate, carbonate, and zeolite mineralization. Layers representing at least 25 vol % of the Orange Mountain Basalt have undergone a major net increase in sodium and carbon content and a major redistribution of magnesium and calcium. Most alteration occurred during the development of a widespread early Jurassic geothermal system similar to the active system of Iceland. In both cases alteration was controlled by active circulation of basin brines through vesicular layers during rapid burial at temperatures that were kept elevated by recurring magmatism. Whole rock Na2O levels typically increased from 2.2 wt. % in unaltered layers to 3.2 wt. % in vesicular layers, and commonly reached levels exceeding 5 wt. %. The environmental implications of the removal of such massive amounts of sodium from the geothermal system on the chlorine budget and the salt content of Early Jurassic lakes are currently being evaluated. Massive amounts of carbon sequestration from the geothermal system may have mitigated an increased burden on the early Jurassic atmosphere where geothermal CO2 may have otherwise been vented at hot springs or solfataras. Calcite amygdules typically account for 5 to 10 vol. % of the vesiculated layers amounting to 66 to 132 kg of CO2 per m3 of basalt. If 25 vol. % of the 160 thick Orange Mountain Basalt is vesiculated that would equate to about 2640 to 5280 kg of CO2 per m2 of basalt. The full extent of calcite enrichment across the entire CAMP province, however, has not yet been determined.

Fe-Ni Micrometorites from Upper Jurassic Cañadon Asfalto Fm., Patagonia, Argentina

Science.gov (United States)

Matteini, M.; Hauser, N.; Cabaleri, N.; Silva Nieto, D.; Cuadros, F. A.; Reyes, S.

2014-09-01

Microspherules from an upper Jurassic sediments from Patagonia, show mineralogical, geochemical and textural features very similar to those reported for I-type micrometeorites whereas some spherules are interpreted as typical G-type micrometeorites.

The Jurassic of Denmark and Greenland: The Jurassic of East Greenland: a sedimentary record of thermal subsidence, onset and culmination of rifting

Directory of Open Access Journals (Sweden)

Surlyk, Finn

2003-10-01

Full Text Available The Late Palaeozoic – Mesozoic extensional basin complex of East Greenland contains a record of deposition during a period of Rhaetian – Early Bajocian thermal subsidence, the onset of riftingin the Late Bajocian, its growth during the Bathonian–Kimmeridgian, culmination of rifting in the Volgian – Early Ryazanian, and waning in the Late Ryazanian – Hauterivian. The area was centred over a palaeolatitude of about 45°N in the Rhaetian and drifted northwards to about 50°N in the Hauterivian. A major climate change from arid to humid subtropical conditions took place at the Norian–Rhaetian transition. Deposition was in addition governed by a long-term sea-level rise with highstands in the Toarcian–Aalenian, latest Callovian and Kimmeridgian, and lowstands in the latest Bajocian – earliest Bathonian, Middle Oxfordian and Volgian.The Rhaetian – Lower Bajocian succession is considered the upper part of a megasequence, termed J1, with its base in the upper Lower Triassic, whereas the Upper Bajocian – Hauterivian succession forms a complete, syn-rift megasequence, termed J2. The southern part of the basin complex in Jameson Land contains a relatively complete Rhaetian–Ryazanian succession and underwent only minor tilting during Middle Jurassic – earliest Cretaceous rifting. Rhaetian – Lower Jurassic deposits are absent north of Jameson Land and this region was fragmented into strongly tilted fault blocks during the protracted rift event. The syn-rift successions of the two areas accordingly show different long-term trends in sedimentary facies. In the southern area, the J2 syn-rift megasequence forms a symmetrical regressive–transgressive–regressive cycle, whereas the J2 megasequence in the northern area shows an asymmetrical, stepwise deepening trend.A total of eight tectonostratigraphic sequences are recognised in the Rhaetian–Hauterivian interval. They reflect major changes in basin configuration, drainage systems

Liquefaction resistance of calcareous sands

International Nuclear Information System (INIS)

Sandoval Vallejo, Eimar

2012-01-01

Calcareous sands are unique in terms of their origin, mineralogy, shape, fragility and intra particle porosity. This article presents results from an experimental program carried out to study the liquefaction resistance of a calcareous sand retrieved from Cabo Rojo at Puerto Rico. The experimental program included mineralogical characterization, index properties, and undrained cyclic triaxial tests on isotropically consolidated reconstituted samples. Due to the large variation in the calcareous sand properties, results are compared with previous researches carried out on other calcareous sands around the world. Results showed a wide range in the liquefaction resistance of the studied calcareous sands. Cabo Rojo sand experienced greater liquefaction resistance than most of the calcareous sands used for comparison. Important differences in the excess pore pressure generation characteristics were also found.

Voltage-sensing domain mode shift is coupled to the activation gate by the N-terminal tail of hERG channels.

Science.gov (United States)

Tan, Peter S; Perry, Matthew D; Ng, Chai Ann; Vandenberg, Jamie I; Hill, Adam P

2012-09-01

Human ether-a-go-go-related gene (hERG) potassium channels exhibit unique gating kinetics characterized by unusually slow activation and deactivation. The N terminus of the channel, which contains an amphipathic helix and an unstructured tail, has been shown to be involved in regulation of this slow deactivation. However, the mechanism of how this occurs and the connection between voltage-sensing domain (VSD) return and closing of the gate are unclear. To examine this relationship, we have used voltage-clamp fluorometry to simultaneously measure VSD motion and gate closure in N-terminally truncated constructs. We report that mode shifting of the hERG VSD results in a corresponding shift in the voltage-dependent equilibrium of channel closing and that at negative potentials, coupling of the mode-shifted VSD to the gate defines the rate of channel closure. Deletion of the first 25 aa from the N terminus of hERG does not alter mode shifting of the VSD but uncouples the shift from closure of the cytoplasmic gate. Based on these observations, we propose the N-terminal tail as an adaptor that couples voltage sensor return to gate closure to define slow deactivation gating in hERG channels. Furthermore, because the mode shift occurs on a time scale relevant to the cardiac action potential, we suggest a physiological role for this phenomenon in maximizing current flow through hERG channels during repolarization.

Regional Jurassic geologic framework of Alabama coastal waters area and adjacent Federal waters area

Science.gov (United States)

Mink, R.M.; Bearden, B.L.; Mancini, E.A.

1989-01-01

To date, numerous Jurassic hydrocarbon fields and pools have been discovered in the Cotton Valley Group, Haynesville Formation, Smackover Formation and Norphlet Formation in the tri-state area of Mississippi, Alabama and Florida, and in Alabama State coastal waters and adjacent Federal waters area. Petroleum traps are basement highs, salt anticlines, faulted salt anticlines and extensional faults associated with salt movement. Reservoirs include continental and marine sandstones, limestones and dolostones. Hydrocarbon types are oil, condensate and natural gas. The onshore stratigraphic and structural information can be used to establish a regional geologic framework for the Jurassic for the State coastal waters and adjacent Federal waters areas. Evaluation of the geologic information along with the hydrocarbon data from the tri-state area indicates that at least three Jurassic hydrocarbon trends (oil, oil and gas condensate, and deep natural gas) can be identified onshore. These onshore hydrocarbon trends can be projected into the Mobile area in the Central Gulf of Mexico and into the Pensacola, Destin Dome and Apalachicola areas in the Eastern Gulf of Mexico. Substantial reserves of natural gas are expected to be present in Alabama State waters and the northern portion of the Mobile area. Significant accumulations of oil and gas condensate may be encountered in the Pensacola, Destin Dome, and Apalachicola areas. ?? 1989.

Geothermal regime and Jurassic source rock maturity of the Junggar basin, northwest China

Science.gov (United States)

Nansheng, Qiu; Zhihuan, Zhang; Ershe, Xu

2008-01-01

We analyze the thermal gradient distribution of the Junggar basin based on oil-test and well-logging temperature data. The basin-wide average thermal gradient in the depth interval of 0-4000 m is 22.6 °C/km, which is lower than other sedimentary basins in China. We report 21 measured terrestrial heat flow values based on detailed thermal conductivity data and systematical steady-state temperature data. These values vary from 27.0 to 54.1 mW/m 2 with a mean of 41.8 ± 7.8 mW/m 2. The Junggar basin appears to be a cool basin in terms of its thermal regime. The heat flow distribution within the basin shows the following characteristics. (1) The heat flow decreases from the Luliang Uplift to the Southern Depression; (2) relatively high heat flow values over 50 mW/m 2 are confined to the northern part of the Eastern Uplift and the adjacent parts of the Eastern Luliang Uplift and Central Depression; (3) The lowest heat flow of smaller than 35 mW/m 2 occurs in the southern parts of the basin. This low thermal regime of the Junggar basin is consistent with the geodynamic setting, the extrusion of plates around the basin, the considerably thick crust, the dense lithospheric mantle, the relatively stable continental basement of the basin, low heat generation and underground water flow of the basin. The heat flow of this basin is of great significance to oil exploration and hydrocarbon resource assessment, because it bears directly on issues of petroleum source-rock maturation. Almost all oil fields are limited to the areas of higher heat flows. The relatively low heat flow values in the Junggar basin will deepen the maturity threshold, making the deep-seated widespread Permian and Jurassic source rocks in the Junggar basin favorable for oil and gas generation. In addition, the maturity evolution of the Lower Jurassic Badaowan Group (J 1b) and Middle Jurassic Xishanyao Group (J 2x) were calculated based on the thermal data and burial depth. The maturity of the Jurassic

Dinosaur evolution. A Jurassic ornithischian dinosaur from Siberia with both feathers and scales.

Science.gov (United States)

Godefroit, Pascal; Sinitsa, Sofia M; Dhouailly, Danielle; Bolotsky, Yuri L; Sizov, Alexander V; McNamara, Maria E; Benton, Michael J; Spagna, Paul

2014-07-25

Middle Jurassic to Early Cretaceous deposits from northeastern China have yielded varied theropod dinosaurs bearing feathers. Filamentous integumentary structures have also been described in ornithischian dinosaurs, but whether these filaments can be regarded as part of the evolutionary lineage toward feathers remains controversial. Here we describe a new basal neornithischian dinosaur from the Jurassic of Siberia with small scales around the distal hindlimb, larger imbricated scales around the tail, monofilaments around the head and the thorax, and more complex featherlike structures around the humerus, the femur, and the tibia. The discovery of these branched integumentary structures outside theropods suggests that featherlike structures coexisted with scales and were potentially widespread among the entire dinosaur clade; feathers may thus have been present in the earliest dinosaurs. Copyright © 2014, American Association for the Advancement of Science.

57Fe Mössbauer analysis of the Upper Triassic-Lower Jurassic deep-sea chert: Paleo-redox history across the Triassic-Jurassic boundary and the Toarcian oceanic anoxic event

International Nuclear Information System (INIS)

Sato, Tomohiko; Isozaki, Yukio; Shozugawa, Katsumi; Seimiya, Kimiko; Matsuo, Motoyuki

2012-01-01

We investigated the paleo-redox change across the Triassic-Jurassic (T-J) boundary (∼200 Ma) and the Early Toarcian oceanic anoxic event (T-OAE; ∼183 Ma) recorded in the Upper Triassic to Lower Jurassic pelagic deep-sea cherts in the Inuyama area, Central Japan. The present 57 Fe Mössbauer spectroscopic analysis for these cherts identified five iron species, i.e., hematite (α-Fe 2 O 3 ), pyrite (FeS 2 ), paramagnetic Fe 3 +  , and two paramagnetic Fe 2 +  with different quadrupole splittings. The occurrence of hematite and pyrite in deep-sea cherts essentially indicates primary oxidizing and reducing depositional conditions, respectively. The results confirmed that oxidizing conditions persisted in deep-sea across the T-J boundary. In contrast, across the T-OAE, deep-sea environment shifted to reducing conditions. The first appearance of the gray pyrite-bearing chert marked the onset of the deep-sea oxygen-depletion in the middle Pliensbachian, i.e., clearly before the shallow-sea T-OAE.

MECHANICAL REGENERATION OF SAND WASTE

Directory of Open Access Journals (Sweden)

D. I. Gnir

2005-01-01

Full Text Available The experimental activation of the sand regenerator of the firm SINTO is carried out at ОАО “MZOO". It is shown that sand grains are cleared from films of binding agents, that allows to use the treated sand for preparation of agglutinant and core sands.

Sedimentation of Jurassic fan-delta wedges in the Xiahuayuan basin reflecting thrust-fault movements of the western Yanshan fold-and-thrust belt, China

Science.gov (United States)

Lin, Chengfa; Liu, Shaofeng; Zhuang, Qitian; Steel, Ronald J.

2018-06-01

Mesozoic thrusting within the Yanshan fold-and-thrust belt of North China resulted in a series of fault-bounded intramontane basins whose infill and evolution remain poorly understood. In particular, the bounding faults and adjacent sediment accumulations along the western segments of the belt are almost unstudied. A sedimentological and provenance analysis of the Lower Jurassic Xiahuayuan Formation and the Upper Jurassic Jiulongshan Formation have been mapped to show two distinctive clastic wedges: an early Jurassic wedge representing a mass-flow-dominated, Gilbert-type fan delta with a classic tripartite architecture, and an late Jurassic shoal-water fan delta without steeply inclined strata. The basinward migration of the fan-delta wedges, together with the analysis of their conglomerate clast compositions, paleocurrent data and detrital zircon U-Pb age spectra, strongly suggest that the northern-bounding Xuanhuan thrust fault controlled their growth during accumulation of the Jiulongshan Formation. Previous studies have suggested that the fan-delta wedge of the Xiahuayuan Formation was also syntectonic, related to movement on the Xuanhua thrust fault. Two stages of thrusting therefore exerted an influence on the formation and evolution of the Xiahuayuan basin during the early-late Jurassic.

Diagnostic Value of ERG in Prostate Needle Biopsies Containing Minute Cancer Foci

Directory of Open Access Journals (Sweden)

Bachurska Svitlana Y.

2017-03-01

Full Text Available Background: Prostate carcinoma (PC is the second most diagnosed cancer in men population worldwide. The small amount of the tissue in prostate needle biopsy is often sufficient for the correct interpretation. Novel antibodies, as ERG, could add to the diagnostic value of IHC study in analysing difficult core biopsies.

Palynology of uppermost Jurassic and lowermost Cretaceous strata in the Eastern Netherlands

NARCIS (Netherlands)

Burger, D.

1965-01-01

The present investigation is a systematical treatment of the sporomorphs from strata at the Jurassic-Cretaceous boundary in the eastern Netherlands Twente area, and an attempt to apply palynology to detailed stratigraphical study, by making use of quantitative pollen analyses. The rock samples used

New Chironomidae (Diptera) with elongate proboscises from the Late Jurassic of Mongolia

Science.gov (United States)

Lukashevich, Elena D.; Przhiboro, Andrey A.

2011-01-01

Abstract Four new species of Chironomidae with well-developed elongate proboscises are described from a Late Jurassic site Shar Teg in SW Mongolia. These are named Cretaenne rasnicyni sp. n., Podonomius blepharis sp. n., Podonomius macromastix sp. n., ?Podonomius robustus sp. n. PMID:22259285

Crushed rock sand – An economical and ecological alternative to natural sand to optimize concrete mix

Directory of Open Access Journals (Sweden)

Sanjay Mundra

2016-09-01

Full Text Available The study investigates the use of crushed rock sand as viable alternative to Natural River sand that is being conventionally used as fine aggregate in cement concrete. Various mix designs were developed for different grades of concrete based on IS, ACI and British codes using Natural River sand and crushed rock sand. In each case, the cube compressive strength test, and beam flexure tests were conducted. The results of the study show that, the strength properties of concrete using crushed rock sand are nearly similar to the conventional concrete. The study has shown that crushed stone sand can be used as economic and readily available alternative to river sand and can therefore help to arrest the detrimental effects on the environment caused due to excessive mining of river sand.

New theropod, thyreophoran, and small sauropod tracks from the Middle Jurassic Bagå Formation, Bornholm, Denmark

DEFF Research Database (Denmark)

Milàn, Jesper

2011-01-01

Three new dinosaur tracks are described from the Middle Jurassic Bagå Formation of Bornholm, Denmark. The tracks are all preserved as natural casts on the underside of fluvial sandstone blocks originating from the old Hasle Klinkefabrik’s clay pit, now called Pyritsøen. The new tracks are from...... a medium-sized theropod, a thyreophoran, and a small sauropod. Together with a hyreophoran track and large sauropod tracks described in 2005, the Middle Jurassic dinosaur fauna of Bornholm now comprises theropods, two sizes of sauropods and at least one type of thyreophoran dinosaur. This is important...

Late Jurassic-Early Cretaceous continental convergence and intracontinental orogenesis in East Asia: A synthesis of the Yanshan Revolution

Science.gov (United States)

Dong, Shuwen; Zhang, Yueqiao; Zhang, Fuqin; Cui, Jianjun; Chen, Xuanhua; Zhang, Shuanhong; Miao, Laicheng; Li, Jianhua; Shi, Wei; Li, Zhenhong; Huang, Shiqi; Li, Hailong

2015-12-01

The basic tectonic framework of continental East Asia was produced by a series of nearly contemporaneous orogenic events in the late Middle Jurassic to Early Cretaceous. Commonly, the Late Mesozoic orogenic processes were characterized by continent-continent collision, large-scale thrusting, strike-slip faulting and intense crustal shortening, crustal thickening, regional anatexis and metamorphism, followed by large-scale lithospheric extension, rifting and magmatism. To better understand the geological processes, this paper reviews and synthesizes existing multi-disciplinary geologic data related to sedimentation, tectonics, magmatism, metamorphism and geochemistry, and proposes a two-stage tectono-thermal evolutionary history of East Asia during the late Middle Jurassic to Early Cretaceous (ca. 170-120 Ma). In the first stage, three orogenic belts along the continental margins were formed coevally at ca. 170-135 Ma, i.e., the north Mongol-Okhotsk orogen, the east paleo-Pacific coastal orogen, and the west Bangong-Nujiang orogen. Tectonism related to the coastal orogen caused extensive intracontinental folding and thrusting that resulted in a depositional hiatus in the Late Jurassic, as well as crustal anatexis that generated syn-kinematic granites, adakites and migmatites. The lithosphere of the East Asian continent was thickened, reaching a maximum during the latest Jurassic or the earliest Cretaceous. In the second stage (ca. 135-120 Ma), delamination of the thickened lithosphere resulted in a remarkable (>120 km) lithospheric thinning and the development of mantle-derived magmatism, mineralization, metamorphic core complexes and rift basins. The Middle Jurassic-Early Cretaceous subduction of oceanic plates (paleo-Pacific, meso-Tethys, and Mongol-Okhotsk) and continent-continent collision (e.g. Lhasa and Qiangtang) along the East Asian continental margins produced broad coastal and intracontinental orogens. These significant tectonic activities, marked by

Sediment geology and halokinetic processes in the Upper Jurassic of Konrad mine, Bleckenstedter Mulde

International Nuclear Information System (INIS)

Ottomann, A.

1991-01-01

The Konrad mine is the only North German mine that is located in the Upper Jurassic. Lithologically, the sediment rock of the mine is not the same as in the rest of the Jurassic of Niedersachsen. The rock strata of the Bleckenstein trough are a special kind of facies. The report attempts to describe the effects of halokinetic movements on facies distribution. It describes the sedimentary and diagenetic, history of the whole Oxfordian and parts of the Kimmeridgian in the mine field on the basis of selected underground roadways. This necessitates a sufficient number of test points and sampled material. Sampling and mapping were carried out in the mine between January and July 1989. (orig.). 43 figs., 3 tabs [de

Common variants in the hERG (KCNH2) voltage-gated potassium channel are associated with altered fasting and glucose-stimulated plasma incretin and glucagon responses

DEFF Research Database (Denmark)

Engelbrechtsen, Line; Mahendran, Yuvaraj; Jonsson, Anna

2018-01-01

BACKGROUND: Patients with long QT syndrome due to rare loss-of-function mutations in the human ether-á-go-go-related gene (hERG) have prolonged QT interval, risk of arrhythmias, increased secretion of insulin and incretins and impaired glucagon response to hypoglycemia. This is caused by a dysfun......BACKGROUND: Patients with long QT syndrome due to rare loss-of-function mutations in the human ether-á-go-go-related gene (hERG) have prolonged QT interval, risk of arrhythmias, increased secretion of insulin and incretins and impaired glucagon response to hypoglycemia. This is caused...... by a dysfunctional Kv11.1 voltage-gated potassium channel. Based on these findings in patients with rare variants in hERG, we hypothesized that common variants in hERG may also lead to alterations in glucose homeostasis. Subsequently, we aimed to evaluate the effect of two common gain-of-function variants in hERG...... in hERG on QT-interval and circulation levels of incretins, insulin and glucagon. The Danish population-based Inter99 cohort (n = 5895) was used to assess the effect of common variants on QT-interval. The Danish ADDITION-PRO cohort was used (n = 1329) to study genetic associations with levels of GLP-1...

The predictive value of ERG protein expression for development of castration-resistant prostate cancer in hormone-naïve advanced prostate cancer treated with primary androgen deprivation therapy

DEFF Research Database (Denmark)

Berg, Kasper Drimer; Røder, Martin A; Thomsen, Frederik B

2015-01-01

BACKGROUND: Biomarkers predicting response to primary androgen deprivation therapy (ADT) and risk of castration-resistant prostate cancer (CRPC) is lacking. We aimed to analyse the predictive value of ERG expression for development of CRPC. METHODS: In total, 194 patients with advanced and....../or metastatic prostate cancer (PCa) treated with first-line castration-based ADT were included. ERG protein expression was analysed in diagnostic specimens using immunohistochemistry (anti-ERG, EPR3864). Time to CRPC was compared between ERG subgroups using multiple cause-specific Cox regression stratified......-negative group, respectively. Compared to a model omitting ERG-status, the ERG-stratified model showed comparable AUC values 1 year (77.6% vs. 78.0%, P = 0.82), 2 years (71.7% vs. 71.8%, P = 0.85), 5 years (68.5% vs. 69.9%, P = 0.32), and 8 years (67.9% vs. 71.4%, P = 0.21) from ADT initiation. No differences...

Mid-ocean ridges produced thicker crust in the Jurassic than in Recent times

Science.gov (United States)

Van Avendonk, H. J.; Harding, J.; Davis, J. K.; Lawver, L. A.

2016-12-01

We present a compilation of published marine seismic refraction data to show that oceanic crust was 1.7 km thicker on average in the mid-Jurassic (170 Ma) than along the present-day mid-ocean ridge system. Plate reconstructions in a fixed hotspot framework show that the thickness of oceanic crust does not correlate with proximity to mantle hotspots, so it is likely that mid-plate volcanism is not the cause of this global trend. We propose that more melt was extracted from the upper mantle beneath mid-ocean ridges in the Jurassic than in recent times. Numerical studies show that temperature increase of 1 degree C in the mantle can lead to approximately 50-70 m thicker crust, so the upper mantle may have cooled 15-20 degrees C/100 Myr since 170 Ma. This average temperature decrease is larger than the secular cooling rate of the Earth's mantle, which is roughly 10 degrees C/100 Myr since the Archean. Apparently, the present-day configuration and dynamics of continental and oceanic plates removes heat more efficiently from the Earth's mantle than in its earlier history. The increase of ocean crustal thickness with plate age is also stronger in the Indian and Atlantic oceans than in the Pacific Ocean basin. This confirms that thermal insulation by the supercontinent Pangaea raised the temperature of the underlying asthenospheric mantle, which in turn led to more magmatic output at the Jurassic mid-ocean ridges of the Indian and Atlantic oceans.

Rheological Characterization of Green Sand Flow

DEFF Research Database (Denmark)

Jabbaribehnam, Mirmasoud; Spangenberg, Jon; Hovad, Emil

2016-01-01

The main aim of this paper is to characterize experimentally the flow behaviour of the green sand that is used for casting of sand moulds. After the sand casting process is performed, the sand moulds are used for metal castings. The rheological properties of the green sand is important to quantif...

Draft Genome Sequence of MCPA-Degrading Sphingomonas sp. Strain ERG5, Isolated from a Groundwater Aquifer in Denmark

DEFF Research Database (Denmark)

Nielsen, Tue Kjærgaard; Kot, Witold; Sørensen, Sebastian R

2015-01-01

Sphingomonas sp. strain ERG5 was isolated from a bacterial community, originating from a groundwater aquifer polluted with low pesticide concentrations. This bacterium degrades 2-methyl-4-chlorophenoxyacetic acid (MCPA) in a wide spectrum of concentrations and has been shown to function in bioaug......Sphingomonas sp. strain ERG5 was isolated from a bacterial community, originating from a groundwater aquifer polluted with low pesticide concentrations. This bacterium degrades 2-methyl-4-chlorophenoxyacetic acid (MCPA) in a wide spectrum of concentrations and has been shown to function...

The Jurassic of Denmark and Greenland: The Middle Jurassic of western and northern Europe: its subdivisions, geochronology and correlations

Directory of Open Access Journals (Sweden)

Callomon, John H.

2003-10-01

Full Text Available The palaeogeographic settings of Denmark and East Greenland during the Middle Jurassic are outlined. They lay in the widespread epicontinental seas that covered much of Europe in the post-Triassic transgression. It was a period of continuing eustatic sea-level rise, with only distant connections to world oceans: to the Pacific, via the narrow Viking Straits between Greenland and Norway and hence the arctic Boreal Sea to the north; and to the subtropical Tethys, via some 1200 km of shelf-seas to the south. The sedimentary history of the region was strongly influenced by two factors: tectonism and climate. Two modes of tectonic movement governed basinal evolution: crustal extension leading to subsidence through rifting, such as in the Viking and Central Grabens of the North Sea; and subcrustal thermal upwelling, leading to domal uplift and the partition of marine basins through emergent physical barriers, as exemplified by the Central North Sea Dome with its associated volcanics. The climatic gradient across the 30º of temperate latitude spanned by the European seas governed biotic diversity and biogeography, finding expression in rock-forming biogenic carbonates that dominate sediments in the south and give way to largely siliciclastic sediments in the north. Geochronology of unrivalled finesse is provided by standard chronostratigraphy based on the biostratigraphy of ammonites. The Middle Jurassic saw the onset of considerable bioprovincial endemisms in these guide-fossils, making it necessary to construct parallel standard zonations for Boreal, Subboreal or NW European and Submediterranean Provinces, of which the NW European zonation provides the primary international standard. The current versions of these zonations are presented and reviewed.

Nain's Hierarchy of Needs: An Alternative to Maslow's & ERG's Hierarchy of Needs

OpenAIRE

nain, bhavya

2013-01-01

This article gives reasons as to why Maslow's & ERG Theory of Needs is inaccurate. It also gives reasons why the same is inaccurate in an organizational perspective. The author also gives a alternative model of needs, namely the Nain Model, which is particularly applicable in an organizational perspective. This article has been written for those interested in Organizational Behaviour.

The Alberta oil sands story

Energy Technology Data Exchange (ETDEWEB)

1974-01-01

This report serves as a detailed introduction to the Alberta oil sands and their development. It includes a description of the oil sands deposits, an outline of crude bitumen recovery and upgrading processes, the role of Alberta Energy Company in oil sands development, environmental aspects, manpower requirements for oil sands development, research needs, and further oil sands projects. Presently proven recoverable reserves in the oil sands amount to 26.5 billion bbl of synthetic crude. Production from the Syncrude plant (125,000 bbl/d capacity) is expected to begin in 1977, followed by a Shell Canada operation around 1980. The provincial government will participate in the oil sand industry through its joint venture participation in Syncrude and its 50% share in Alberta Energy Company; the latter company participates in related aspects of the Syncrude project, such as pipelines. The result of Alberta's participation in the industry will mean that, directly or indirectly, the province will realize 60% of the total profits. The job creation potential of oil sands projects is estimated to be extensive, with a direct and indirect work force supported by oil sands activities possibly reaching 180,000 persons by the year 2000. Research needs have been identified, particularly in the area of in-situ thermal recovery technology, and the creation of the Alberta Oil Sands Technology and Research Authority has been authorized in order to meet these needs. Although current reserves are sufficient to support 20-30 synthetic crude plants, a number of factors will limit expansion of the industry. 8 figs., 5 tabs.

Permeability, compressibility and porosity of Jurassic shale from the Norwegian-Danish Basin

DEFF Research Database (Denmark)

Mbia, Ernest Ncha; Fabricius, Ida Lykke; Krogsbøll, Anette

2014-01-01

The Fjerritslev Formation in the Norwegian-Danish Basin forms the main seal to Upper Triassic-Lower Jurassic sandstone reservoirs. In order to estimate the sealing potential and rock properties, samples from the deep wells Vedsted-1 in Jylland, and Stenlille-2 and Stenlille-5 on Sjael-land, were ...

Rapid detection of ERG11 gene mutations in clinical Candida albicans isolates with reduced susceptibility to fluconazole by rolling circle amplification and DNA sequencing

Directory of Open Access Journals (Sweden)

Ellis David

2009-08-01

Full Text Available Abstract Background Amino acid substitutions in the target enzyme Erg11p of azole antifungals contribute to clinically-relevant azole resistance in Candida albicans. A simple molecular method for rapid detection of ERG11 gene mutations would be an advantage as a screening tool to identify potentially-resistant strains and to track their movement. To complement DNA sequencing, we developed a padlock probe and rolling circle amplification (RCA-based method to detect a series of mutations in the C. albicans ERG11 gene using "reference" azole-resistant isolates with known mutations. The method was then used to estimate the frequency of ERG11 mutations and their type in 25 Australian clinical C. albicans isolates with reduced susceptibility to fluconazole and in 23 fluconazole-susceptible isolates. RCA results were compared DNA sequencing. Results The RCA assay correctly identified all ERG11 mutations in eight "reference" C. albicans isolates. When applied to 48 test strains, the RCA method showed 100% agreement with DNA sequencing where an ERG11 mutation-specific probe was used. Of 20 different missense mutations detected by sequencing in 24 of 25 (96% isolates with reduced fluconazole susceptibility, 16 were detected by RCA. Five missense mutations were detected by both methods in 18 of 23 (78% fluconazole-susceptible strains. DNA sequencing revealed that mutations in non-susceptible isolates were all due to homozygous nucleotide changes. With the exception of the mutations leading to amino acid substitution E266D, those in fluconazole-susceptible strains were heterozygous. Amino acid substitutions common to both sets of isolates were D116E, E266D, K128T, V437I and V488I. Substitutions unique to isolates with reduced fluconazole susceptibility were G464 S (n = 4 isolates, G448E (n = 3, G307S (n = 3, K143R (n = 3 and Y123H, S405F and R467K (each n = 1. DNA sequencing revealed a novel substitution, G450V, in one isolate. Conclusion The sensitive RCA

Relationships between the Brook Street Terrane and Median Tectonic Zone (Median Batholith) : evidence from Jurassic conglomerates

International Nuclear Information System (INIS)

Tulloch, A.J.; Kimbrough, D.L.; Landis, C.A.; Mortimer, N.; Johnston, M.R.

1999-01-01

U-Pb zircon ages of 237-180 Ma and c. 280 Ma of seven granitoid clasts from the Rainy River Conglomerate which lies within the eastern Median Tectonic Zone (Median Batholith) in Nelson, and the Barretts Formation of the Brook Street Terrane in Southland, constrain the depositional ages of both units to be no older than c. 180-200 Ma (Early Jurassic). The minimum age of the Rainy River Conglomerate is constrained by the 147 +2 -1 Ma (Latest Jurassic) emplacement age of the One Mile Gabbronorite (new name: previously western Buller Diorite). The ages and chemistry of five of the granitoid clasts are broadly compatible with derivation from rocks that are now represented by Triassic plutons of the Median Tectonic Zone (Median Batholith), although ages as young as 180 Ma are slightly outside the range of the latter as currently exposed in New Zealand. The age (273-290 Ma, 237 +/- 3 Ma) and chemistry of the other two clasts (one each from Rainy River Conglomerate and Barretts Formation) suggest derivation from the Brook Street Terrane. Similarity in stratigraphic age, depositional characteristics, granitoid clast ages and composition between Rainy River Conglomerate and Barretts Formation suggests that they are broadly correlative and collectively overlapped a combined Brook Street Terrane - Median Batholith (MTZ) before the Late Jurassic (147 +2 -1 Ma). Sedimentary overlap may also have continued across to Middle Jurassic conglomeratic strata in the Murihiku Terrane to the east of the Brook Street Terrane. A U-Pb zircon age of 261 +/- 2 Ma is reported for Pourakino Trondhjemite of the Brook Street Terrane. (author). 56 refs., 10 figs., 4 tabs

Presence of the dinosaur Scelidosaurus indicates Jurassic age for the Kayenta Formation (Glen Canyon Group, northern Arizona)

Science.gov (United States)

Padian, Kevin

1989-05-01

The Glen Canyon Group (Moenave, Wingate, Kayenta and Navajo Formations) of northern Arizona represents an extensive outcrop of early Mesozoic age terrestrial sediments. The age of these formations has long been disputed because independent stratigraphic data from marine tie-ins, paleobotanical and palynological evidence, and radiometric calibrations have been scanty or absent. The fauna of the Kayenta Formation in particular has been problematic because it has appeared to contain both typical Late Triassic and Early Jurassic taxa Here I report that the principal evidence for Late Triassic taxa, dermal scutes previously assigned to an aetosaur, in fact belongs to the thyreophoran ornithischian dinosaur Scelidosaurus, previously known only as a washed-in form found in marine sediments in the Early Jurassic of England. The presence of this dinosaur represents the first vertebrate biostratigraphic tie-in of the Glen Canyon Group horizons with reliably dated marine deposits in Europe. Together with revised systematic assessments of other vertebrates and independent evidence from fossil pollen, it supports an Early Jurassic age for the Kayenta Formation and most or all of the Glen Canyon Group.

Early to Middle Jurassic tectonic evolution of the Bogda Mountains, Northwest China: Evidence from sedimentology and detrital zircon geochronology

Science.gov (United States)

Ji, Hongjie; Tao, Huifei; Wang, Qi; Qiu, Zhen; Ma, Dongxu; Qiu, Junli; Liao, Peng

2018-03-01

The Bogda Mountains, as an important intracontinental orogenic belt, are situated in the southern part of the Central Asian Orogenic Belt (CAOB), and are a key area for understanding the Mesozoic evolution of the CAOB. However, the tectonic evolution of the Bogda Mountains remains controversial during the Mesozoic Era, especially the Early to Middle Jurassic Periods. The successive Lower to Middle Jurassic strata are well preserved and exposed along the northern flank of the Western Bogda Mountains and record the uplift processes of the Bogda Mountains. In this study, we analysed sedimentary facies combined with detrital zircon U-Pb geochronology at five sections of Lower to Middle Jurassic strata to detect the tectonic evolution and changes of provenance in the Bogda area. During Early to Middle Jurassic times, the fluvial, deltaic and lacustrine environments dominated in the western section of the Bogda area. The existence of Early Triassic peak age indicates that the Bogda Mountains did not experience uplift during the period of early Badaowan Formation deposition. The Early Triassic to Late Permian granitoid plutons and Carboniferous volcanic rocks from the Barkol and Santanghu areas were the main provenances. The significant change in the U-Pb age spectrum implies that the Eastern Bogda Mountains initiated uplift in the period of late Badaowan Formation deposition, and the Eastern Junggar Basin and the Turpan-Hami Basin were partially partitioned. The Eastern Bogda Mountains gradually became the major provenance. From the period of early Sangonghe to early Toutunhe Formations deposition, the provenance of the sediments and basin-range frame were similar to that of late Badaowan. However, the Eastern Bogda Mountains suffered intermittent uplift three times, and successive denudation. The uplifts respectively happened in early Sangonghe, late Sangonghe to early Xishanyao, and late Xishanyao to early Toutunhe. During the deposition stage of Toutunhe Formation, a

Overexpression of erg1 gene in Trichoderma harzianum CECT 2413: effect on the induction of tomato defence-related genes.

Science.gov (United States)

Cardoza, R E; Malmierca, M G; Gutiérrez, S

2014-09-01

To investigate the effect of the overexpression of erg1 gene of Trichoderma harzianum CECT 2413 (T34) on the Trichoderma-plant interactions and in the biocontrol ability of this fungus. Transformants of T34 strain overexpressing erg1 gene did not show effect on the ergosterol level, although a drastic decrease in the squalene level was observed in the transformants at 96 h of growth. During interaction with plants, the erg1 overexpression resulted in a reduction of the priming ability of several tomato defence-related genes belonging to the salicylate pathway, and also of the TomLoxA gene, which is related to the jasmonate pathway. Interestingly, other jasmonate-related genes, such as PINI and PINII, were slightly induced. The erg1 overexpressed transformants also showed a reduced ability to colonize tomato roots. The ergosterol biosynthetic pathway might play an important role in regulating Trichoderma-plant interactions, although this role does not seem to be restricted to the final product; instead, other intermediates such as squalene, whose role in the Trichoderma-plant interaction has not been characterized, would also play an important role. The functional analysis of genes involved in the synthesis of ergosterol could provide additional strategies to improve the ability of biocontrol of the Trichoderma strains and their interaction with plants. © 2014 The Society for Applied Microbiology.

MiR-17-5p Impairs Trafficking of H-ERG K+ Channel Protein by Targeting Multiple ER Stress-Related Chaperones during Chronic Oxidative Stress

OpenAIRE

Wang, Qi; Hu, Weina; Lei, Mingming; Wang, Yong; Yan, Bing; Liu, Jun; Zhang, Ren; Jin, Yuanzhe

2013-01-01

BACKGROUND: To investigate if microRNAs (miRNAs) play a role in regulating h-ERG trafficking in the setting of chronic oxidative stress as a common deleterious factor for many cardiac disorders. METHODS: We treated neonatal rat ventricular myocytes and HEK293 cells with stable expression of h-ERG with H2O2 for 12 h and 48 h. Expression of miR-17-5p seed miRNAs was quantified by real-time RT-PCR. Protein levels of chaperones and h-ERG trafficking were measured by Western blot analysis. Lucifer...

The role of hERG1 ion channels in epithelial-mesenchymal transition and the capacity of riluzole to reduce cisplatin resistance in colorectal cancer cells.

Science.gov (United States)

Fortunato, Angelo

2017-08-01

The transition of cells from the epithelial to the mesenchymal state (EMT) plays an important role in tumor progression. EMT allows cells to acquire mobility, stem-like behavior and resistance to apoptosis and drug treatment. These features turn EMT into a central process in tumor biology. Ion channels are attractive targets for the treatment of cancer since they play critical roles in controlling a wide range of physiological processes that are frequently deregulated in cancer. Here, we investigated the role of ether-a-go-go-related 1 (hERG1) ion channels in the EMT of colorectal cancer cells. We studied the epithelial-mesenchymal profile of different colorectal cancer-derived cell lines and the expression of hERG1 potassium channels in these cell lines using real-time PCR. Next, we knocked down hERG1 expression in HCT116 cells using lentivirus mediated RNA interference and characterized the hERG1 silenced cells in vitro and in vivo. Finally, we investigated the capacity of riluzole, an ion channel-modulating drug used in humans to treat amyotrophic lateral sclerosis, to reduce the resistance of the respective colorectal cancer cells to the chemotherapeutic drug cisplatin. We found that of the colorectal cancer-derived cell lines tested, HCT116 showed the highest mesenchymal profile and a high hERG1 expression. Subsequent hERG1 expression knockdown induced a change in cell morphology, which was accompanied by a reduction in the proliferative and tumorigenic capacities of the cells. Notably, we found that hERG1expression knockdown elicited a reversion of the EMT profile in HCT116 cells with a reacquisition of the epithelial-like profile. We also found that riluzole increased the sensitivity of HCT116 cisplatin-resistant cells to cisplatin. Our data indicate that hERG1 plays a role in the EMT of colorectal cancer cells and that its knockdown reduces the proliferative and tumorigenic capacities of these cells. In addition, we conclude that riluzole may be used in

Compressive behavior of fine sand.

Energy Technology Data Exchange (ETDEWEB)

Martin, Bradley E. (Air Force Research Laboratory, Eglin, FL); Kabir, Md. E. (Purdue University, West Lafayette, IN); Song, Bo; Chen, Wayne (Purdue University, West Lafayette, IN)

2010-04-01

The compressive mechanical response of fine sand is experimentally investigated. The strain rate, initial density, stress state, and moisture level are systematically varied. A Kolsky bar was modified to obtain uniaxial and triaxial compressive response at high strain rates. A controlled loading pulse allows the specimen to acquire stress equilibrium and constant strain-rates. The results show that the compressive response of the fine sand is not sensitive to strain rate under the loading conditions in this study, but significantly dependent on the moisture content, initial density and lateral confinement. Partially saturated sand is more compliant than dry sand. Similar trends were reported in the quasi-static regime for experiments conducted at comparable specimen conditions. The sand becomes stiffer as initial density and/or confinement pressure increases. The sand particle size become smaller after hydrostatic pressure and further smaller after dynamic axial loading.

Chapter 2. Assessment of undiscovered conventional oil and gas resources--Upper Jurassic-Lower Cretaceous Cotton Valley group, Jurassic Smackover interior salt basins total petroleum system, in the East Texas basin and Louisiana-Mississippi salt basins provinces.

Science.gov (United States)

Dyman, T.S.; Condon, S.M.

2006-01-01

The Jurassic Smackover Interior Salt Basins Total Petroleum System is defined for this assessment to include (1) Upper Jurassic Smackover Formation carbonates and calcareous shales and (2) Upper Jurassic and Lower Cretaceous Cotton Valley Group organic-rich shales. The Jurassic Smackover Interior Salt Basins Total Petroleum System includes four conventional Cotton Valley assessment units: Cotton Valley Blanket Sandstone Gas (AU 50490201), Cotton Valley Massive Sandstone Gas (AU 50490202), Cotton Valley Updip Oil and Gas (AU 50490203), and Cotton Valley Hypothetical Updip Oil (AU 50490204). Together, these four assessment units are estimated to contain a mean undiscovered conventional resource of 29.81 million barrels of oil, 605.03 billion cubic feet of gas, and 19.00 million barrels of natural gas liquids. The Cotton Valley Group represents the first major influx of clastic sediment into the ancestral Gulf of Mexico. Major depocenters were located in south-central Mississippi, along the Louisiana-Mississippi border, and in northeast Texas. Reservoir properties and production characteristics were used to identify two Cotton Valley Group sandstone trends across northern Louisiana and east Texas: a high-permeability blanket-sandstone trend and a downdip, low-permeability massive-sandstone trend. Pressure gradients throughout most of both trends are normal, which is characteristic of conventional rather than continuous basin-center gas accumulations. Indications that accumulations in this trend are conventional rather than continuous include (1) gas-water contacts in at least seven fields across the blanket-sandstone trend, (2) relatively high reservoir permeabilities, and (3) high gas-production rates without fracture stimulation. Permeability is sufficiently low in the massive-sandstone trend that gas-water transition zones are vertically extensive and gas-water contacts are poorly defined. The interpreted presence of gas-water contacts within the Cotton Valley

Embryology of Early Jurassic dinosaur from China with evidence of preserved organic remains.

Science.gov (United States)

Reisz, Robert R; Huang, Timothy D; Roberts, Eric M; Peng, ShinRung; Sullivan, Corwin; Stein, Koen; LeBlanc, Aaron R H; Shieh, DarBin; Chang, RongSeng; Chiang, ChengCheng; Yang, Chuanwei; Zhong, Shiming

2013-04-11

Fossil dinosaur embryos are surprisingly rare, being almost entirely restricted to Upper Cretaceous strata that record the late stages of non-avian dinosaur evolution. Notable exceptions are the oldest known embryos from the Early Jurassic South African sauropodomorph Massospondylus and Late Jurassic embryos of a theropod from Portugal. The fact that dinosaur embryos are rare and typically enclosed in eggshells limits their availability for tissue and cellular level investigations of development. Consequently, little is known about growth patterns in dinosaur embryos, even though post-hatching ontogeny has been studied in several taxa. Here we report the discovery of an embryonic dinosaur bone bed from the Lower Jurassic of China, the oldest such occurrence in the fossil record. The embryos are similar in geological age to those of Massospondylus and are also assignable to a sauropodomorph dinosaur, probably Lufengosaurus. The preservation of numerous disarticulated skeletal elements and eggshells in this monotaxic bone bed, representing different stages of incubation and therefore derived from different nests, provides opportunities for new investigations of dinosaur embryology in a clade noted for gigantism. For example, comparisons among embryonic femora of different sizes and developmental stages reveal a consistently rapid rate of growth throughout development, possibly indicating that short incubation times were characteristic of sauropodomorphs. In addition, asymmetric radial growth of the femoral shaft and rapid expansion of the fourth trochanter suggest that embryonic muscle activation played an important role in the pre-hatching ontogeny of these dinosaurs. This discovery also provides the oldest evidence of in situ preservation of complex organic remains in a terrestrial vertebrate.

Possibility of star (pyramid) dune development in the area of bimodal wind regime

Science.gov (United States)

Biejat, K.

2012-04-01

Star (pyramid) dunes are the largest aeolian landforms. They can occur in three types - simple, complex and compound. Development of this type of dunes is usually connected with multidirectional or complex wind regimes. The aim of this study was to verify a hypothesis that the star dunes can also develop by a bimodal wind regime and by local modifications of nearsurface wind flow directions. Field study was performed on Erg Chebbi, in southern Morocco. Several star and transverse dunes were selected for the study of their shape. The star dunes were analysed concerning their type and position in the dune field. This erg contains all of three types of star dunes together with transverse dunes. The regional wind data show that there are two dominant wind directions - NE (Chergui) and SW (Saheli). To determine the difference in shape of star dunes, we performed topographic surveying by GPS RTK. The results allowed to create 3D models of star dunes. The models were used to determine metric characteristics of star dunes, including area of dune basis, volume, and slope angles. On the basis of 3D models, primary, secondary and, on the compound dunes, tertiary arms were determined. Primary arms on each type of star dunes, as well as crestlines of transverse dunes, have dominant orientation NW-SE, perpendicular to two dominant wind directions. This clearly confirms that star dunes of Erg Chebbi develop by a bimodal wind regime In contrast to primary arms, subsidiary (secondary and tertiary) arms are not connected to general wind regime. The secondary arms of star dunes occur to be differentially developer. There are more subsidiary arms on SW sides in comparison to the E sides of the dunes where inclination of slopes is constant. It can be therefore inferred that sand has been supplied predominantly from SW direction. This is supported by distribution of the dunes on the erg. Most compound star dunes compose a chain along the E margin of the erg. Comparison of compound star

Geological and technological characterization of the Late Jurassic-Early Cretaceous clay deposits (Jebel Ammar, northeastern Tunisia) for ceramic industry

Science.gov (United States)

Ben M'barek-Jemaï, Moufida; Sdiri, Ali; Ben Salah, Imed; Ben Aissa, Lassaad; Bouaziz, Samir; Duplay, Joelle

2017-05-01

Late Jurassic-Lower Cretaceous clays of the Jebel Ammar study site were used as raw materials for potential applications in ceramic industry. Physico-chemical characterization of the collected samples was performed using atomic absorption spectroscopy, X-ray diffraction, thermogravimetry and dilatometry (Bugot's curve). Geotechnical study was also undertaken by the assessment of plasticity and liquidity limits. It was found that high concentrations of silica, alumina with SiO2/Al2O3 ratio characterized the studied clays; its high amounts of CaO and Fe2O3 in the Late Jurassic clays indicated their calcareous nature. In addition, technological tests indicated moderate to low plasticity values for the Late Jurassic and Lower Cretaceous clays, respectively. Clay fraction (<2 μm) reached 50% of the natural clay in some cases. Mineralogical analysis showed that Jurassic clays were dominated by smectite, illite and kaolinite, as clay mineral species; calcite was the main associated mineral. Lower Cretaceous clays were mainly composed of abundant illite accompanied by well-crystallized smectite and kaolinite. Kaolinite gradually increased upwards, reaching 70% of the total clay fraction (i.e. <2 μm). Quartz, calcite and feldspar were the main non-clay minerals. Based on these analyses, the clays meet technological requirements that would allow their use in the ceramic industry and for the manufacturing of ceramic tiles.

New finds of stegosaur tracks from the Upper Jurassic Lourinhã formation, Portugal

DEFF Research Database (Denmark)

Mateus, Octavio; Milàn, Jesper; Romano, Michael

2011-01-01

Eleven new tracks from the Upper Jurassic of Portugal are described and attributed to the stegosaurian ichnogenus Deltapodus. One track exhibits exceptionally well−preserved impressions of skin on the plantar surface, showing the stegosaur foot to be covered by closely spaced skin tubercles of ca...

On Pluvial Compaction of Sand

DEFF Research Database (Denmark)

Jacobsen, Moust

At the Institute of Civil Engineering in Aalborg model tests on dry sand specimens have been carried out during the last five years. To reduce deviations in test results, the sand laying technique has been carefully studied, and the sand mass spreader constructed. Preliminary results have been...

MORPHOMETRIC CHARACTERIZATION OF THE SAND FRACTION IN A SAND GRAIN IMAGE CAPTURE SYSTEM1

Directory of Open Access Journals (Sweden)

Lucimar Arruda Viana

Full Text Available ABSTRACT Morphology studies assume significant importance in analysis of phenomena of granular systems packaging, in particular with a view to the use of the technique of soil stabilization named particle size correction in forest roads. In this context, this study aimed to develop and operationalize a Sand Grain Image Capture System and, hereby, determine the morphological indices of the sand fractions of two sandy soils called João Pinheiro (JP and Cachoeira da Prata (CP. Soil samples, air-dried, were sieved (2.0 mm nominal mesh size for removal of gravels. The materials that passed through the sieve were subjected to dispersion, washing in 0.053 mm nominal mesh size sieve, removal of organic matter and iron oxides to obtain the clean sand fractions. Subsequently, each soil sample was sieved for separation into twelve classes, between the diameters of 0.149 mm and 1.190 mm, using a Rotap shaker. Next, tests were carried out to characterize the morphometric attributes of the twelve classes of sand fractions of the soils studied. For validation of the performance of the Sand Grain Image Capture System, the results were compared to those obtained using a standard procedure for image analysis. The analysis of the results led to the following conclusions: (i the sand fraction of the JP soil presented higher values for the morphometric indices roundness, elongation and compactness compared to sand fraction of the CP soil; and (ii the Sand Grain Image Capture System worked properly, with practicality.

Technology unlocks tar sands energy

Energy Technology Data Exchange (ETDEWEB)

Law, C

1967-09-25

Tar sand processing technology has been developed primarily in the categories of extraction techniques and in-situ processing. In October, a $235 million venture into tar sand processing will be inspected by visitors from many points on the globe. A synthetic crude of premium quality will be flowing through a 16-in. pipeline from the Tar Island plant site of Great Canadian Oil Sands to Edmonton. This processing plant uses an extractive mining technique. The tar sand pay zone in this area averages approximately 150 ft in thickness with a 50-ft overburden. It has been estimated that the tar sands cannot be exploited when the formation thickness is less than 100 ft and overburden exceeds the same amount. This indicates that extraction techniques can only be used to recover approximately 15% of the tar sand deposits. An in-situ recovery technique developed by Shell of Canada is discussed in detail. In essence it is selective hydraulic fracturing, followed by the injection of emulsifying chemicals and steam.

First records of crocodyle and pterosaur tracks in the Upper Jurassic of Portugal

DEFF Research Database (Denmark)

Mateus, Octavio; Milàn, Jesper

2010-01-01

The Upper Jurassic of Portugal has a rich vertebrate fauna well documented from both body and trace fossils. Although the occurrence of crocodyles and pterosaurs is well documented from body fossils, trace fossils from both groups were unknown until now. Here we describe an isolated crocodyle-lik...

Didactyl tracks of paravian theropods (Maniraptora from the ?Middle Jurassic of Africa.

Directory of Open Access Journals (Sweden)

Alexander Mudroch

Full Text Available BACKGROUND: A new dinosaur tracksite from ?Middle Jurassic sediments of the Irhazer Group on the plains of Agadez (Rep. Niger, northwest Africa revealed extraordinarily well preserved didactyl tracks of a digitigrade bipedal trackmaker. The distinct morphology of the pes imprints indicates a theropod trackmaker from a paravian maniraptoran closely related to birds. METHODOLOGY/PRINCIPAL FINDINGS: The early age and the morphological traits of the tracks allow for description of the new ichnotaxon Paravipus didactyloides. A total of 120 tracks are assigned to 5 individual trackways. The 'medium-sized' tracks with an average footprint length of 27.5 cm and footprint width of 23.1 cm are deeply imprinted into the track bearing sandstone. CONCLUSIONS/SIGNIFICANCE: A comparison with other didactyl tracks gives new insights into the foot morphology of advanced maniraptoran theropods and contributes to knowledge of their evolutionary history. The new ichnotaxon takes an important position in the ichnological fossil record of Gondwana and the mid-Jurassic biota worldwide, because it is among the earliest known records of paravian maniraptorans and of didactyl theropod tracks from Africa.

A Jurassic avialan dinosaur from China resolves the early phylogenetic history of birds.

Science.gov (United States)

Godefroit, Pascal; Cau, Andrea; Dong-Yu, Hu; Escuillié, François; Wenhao, Wu; Dyke, Gareth

2013-06-20

The recent discovery of small paravian theropod dinosaurs with well-preserved feathers in the Middle-Late Jurassic Tiaojishan Formation of Liaoning Province (northeastern China) has challenged the pivotal position of Archaeopteryx, regarded from its discovery to be the most basal bird. Removing Archaeopteryx from the base of Avialae to nest within Deinonychosauria implies that typical bird flight, powered by the forelimbs only, either evolved at least twice, or was subsequently lost or modified in some deinonychosaurians. Here we describe the complete skeleton of a new paravian from the Tiaojishan Formation of Liaoning Province, China. Including this new taxon in a comprehensive phylogenetic analysis for basal Paraves does the following: (1) it recovers it as the basal-most avialan; (2) it confirms the avialan status of Archaeopteryx; (3) it places Troodontidae as the sister-group to Avialae; (4) it supports a single origin of powered flight within Paraves; and (5) it implies that the early diversification of Paraves and Avialae took place in the Middle-Late Jurassic period.

Bituminous sands : tax issues

International Nuclear Information System (INIS)

Patel, B.

2004-01-01

This paper examined some of the tax issues associated with the production of bitumen or synthetic crude oil from oil sands. The oil sands deposits in Alberta are gaining more attention as the supplies of conventional oil in Canada decline. The oil sands reserves located in the Athabasca, Cold Lake and Peace River areas contain about 2.5 trillion barrels of highly viscous hydrocarbons called bitumen, of which nearly 315 billion barrels are recoverable with current technology. The extraction method varies for each geographic area, and even within zones and reservoirs. The two most common extraction methods are surface mining and in-situ extraction such as cyclic steam stimulation (CSS); low pressure steam flood; pressure cycle steam drive; steam assisted gravity drainage (SAGD); hot water flooding; and, fire flood. This paper also discussed the following general tax issues: bituminous sands definition; bituminous sands leases and Canadian development expense versus Canadian oil and gas property expense (COGPE); Canadian exploration expense (CEE) for surface mining versus in-situ methods; additional capital cost allowance; and, scientific research and experimental development (SR and ED). 15 refs

Oil sands tax expenditures

International Nuclear Information System (INIS)

Ketchum, K; Lavigne, R.; Plummer, R.

2001-01-01

The oil sands are a strategic Canadian resource for which federal and provincial governments provide financial incentives to develop and exploit. This report describes the Oil Sands Tax Expenditure Model (OSTEM) developed to estimate the size of the federal income tax expenditure attributed to the oil sands industry. Tax expenditures are tax concessions which are used as alternatives to direct government spending for achieving government policy objectives. The OSTEM was developed within the business Income Tax Division of Canada's Department of Finance. Data inputs for the model were obtained from oil sands developers and Natural Resources Canada. OSTEM calculates annual revenues, royalties and federal taxes at project levels using project-level projections of capital investment, operating expenses and production. OSTEM calculates tax expenditures by comparing taxes paid under different tax regimes. The model also estimates the foregone revenue as a percentage of capital investment. Total tax expenditures associated with investment in the oil sands are projected to total $820 million for the period from 1986 to 2030, representing 4.6 per cent of the total investment. 10 refs., 2 tabs., 7 figs

Tubin: Sinfonie nr. 11 (ergänzt von Kaljo Raid) / Christoph Schlüren

Index Scriptorium Estoniae

Schlüren, Christoph

1997-01-01

Uuest heliplaadist "Tubin: Sinfonie nr. 11 (ergänzt von Kaljo Raid); Pärt: Nekrolog op. 5, Sinfonie nr. 1; Tüür: Searching for Roots, Insula deserta, Zeitraum. Königliches Philharmonisches Orchester Stockholm, Paavo Järvi". Virgin/EMI CD 5 45212 2 (WD:71'34") DDD

Paleolatitudes of the Tibetan Himalaya from primary and secondary magnetizations of Jurassic to Lower Cretaceous sedimentary rocks

Science.gov (United States)

Huang, Wentao; van Hinsbergen, Douwe J. J.; Dekkers, Mark J.; Garzanti, Eduardo; Dupont-Nivet, Guillaume; Lippert, Peter C.; Li, Xiaochun; Maffione, Marco; Langereis, Cor G.; Hu, Xiumian; Guo, Zhaojie; Kapp, Paul

2015-01-01

The Tibetan Himalaya represents the northernmost continental unit of the Indian plate that collided with Asia in the Cenozoic. Paleomagnetic studies on the Tibetan Himalaya can help constrain the dimension and paleogeography of "Greater India," the Indian plate lithosphere that subducted and underthrusted below Asia after initial collision. Here we present a paleomagnetic investigation of a Jurassic (limestones) and Lower Cretaceous (volcaniclastic sandstones) section of the Tibetan Himalaya. The limestones yielded positive fold test, showing a prefolding origin of the isolated remanent magnetizations. Detailed paleomagnetic analyses, rock magnetic tests, end-member modeling of acquisition curves of isothermal remanent magnetization, and petrographic investigation reveal that the magnetic carrier of the Jurassic limestones is authigenic magnetite, whereas the dominant magnetic carrier of the Lower Cretaceous volcaniclastic sandstones is detrital magnetite. Our observations lead us to conclude that the Jurassic limestones record a prefolding remagnetization, whereas the Lower Cretaceous volcaniclastic sandstones retain a primary remanence. The volcaniclastic sandstones yield an Early Cretaceous paleolatitude of 55.5°S [52.5°S, 58.6°S] for the Tibetan Himalaya, suggesting it was part of the Indian continent at that time. The size of "Greater India" during Jurassic time cannot be estimated from these limestones. Instead, a paleolatitude of the Tibetan Himalaya of 23.8°S [21.8°S, 26.1°S] during the remagnetization process is suggested. It is likely that the remagnetization, caused by the oxidation of early diagenetic pyrite to magnetite, was induced during 103-83 or 77-67 Ma. The inferred paleolatitudes at these two time intervals imply very different tectonic consequences for the Tibetan Himalaya.

New dinosaur (Theropoda, stem-Averostra) from the earliest Jurassic of the La Quinta formation, Venezuelan Andes.

Science.gov (United States)

Langer, Max C; Rincón, Ascanio D; Ramezani, Jahandar; Solórzano, Andrés; Rauhut, Oliver W M

2014-10-01

Dinosaur skeletal remains are almost unknown from northern South America. One of the few exceptions comes from a small outcrop in the northernmost extension of the Andes, along the western border of Venezuela, where strata of the La Quinta Formation have yielded the ornithischian Laquintasaura venezuelae and other dinosaur remains. Here, we report isolated bones (ischium and tibia) of a small new theropod, Tachiraptor admirabilis gen. et sp. nov., which differs from all previously known members of the group by an unique suite of features of its tibial articulations. Comparative/phylogenetic studies place the new form as the sister taxon to Averostra, a theropod group that is known primarily from the Middle Jurassic onwards. A new U-Pb zircon date (isotope dilution thermal-ionization mass spectrometry; ID-TIMS method) from the bone bed matrix suggests an earliest Jurassic maximum age for the La Quinta Formation. A dispersal-vicariance analysis suggests that such a stratigraphic gap is more likely to be filled by new records from north and central Pangaea than from southern areas. Indeed, our data show that the sampled summer-wet equatorial belt, which yielded the new taxon, played a pivotal role in theropod evolution across the Triassic-Jurassic boundary.

Lower limits of ornithischian dinosaur body size inferred from a new Upper Jurassic heterodontosaurid from North America

Science.gov (United States)

Butler, Richard J.; Galton, Peter M.; Porro, Laura B.; Chiappe, Luis M.; Henderson, Donald M.; Erickson, Gregory M.

2010-01-01

The extremes of dinosaur body size have long fascinated scientists. The smallest (dinosaurs are carnivorous saurischian theropods, and similarly diminutive herbivorous or omnivorous ornithischians (the other major group of dinosaurs) are unknown. We report a new ornithischian dinosaur, Fruitadens haagarorum, from the Late Jurassic of western North America that rivals the smallest theropods in size. The largest specimens of Fruitadens represent young adults in their fifth year of development and are estimated at just 65–75 cm in total body length and 0.5–0.75 kg body mass. They are thus the smallest known ornithischians. Fruitadens is a late-surviving member of the basal dinosaur clade Heterodontosauridae, and is the first member of this clade to be described from North America. The craniodental anatomy and diminutive body size of Fruitadens suggest that this taxon was an ecological generalist with an omnivorous diet, thus providing new insights into morphological and palaeoecological diversity within Dinosauria. Late-surviving (Late Jurassic and Early Cretaceous) heterodontosaurids are smaller and less ecologically specialized than Early (Late Triassic and Early Jurassic) heterodontosaurids, and this ecological generalization may account in part for the remarkable 100-million-year-long longevity of the clade. PMID:19846460

Early Jurassic diversification of pycnodontiform fishes (Actinopterygii, Neopterygii) after the end-Triassic extinction event: evidence from a new genus and species, Grimmenodon aureum.

Science.gov (United States)

Stumpf, Sebastian; Ansorge, Jörg; Pfaff, Cathrin; Kriwet, Jürgen

2017-07-04

A new genus and species of pycnodontiform fishes, Grimmenodon aureum , from marginal marine, marine-brackish lower Toarcian ( Harpoceras exaratum ammonite subzone) clay deposits of Grimmen in northeastern Germany is described. The single specimen represents a diagnostic left prearticular dentition characterized by unique tooth arrangement and ornamentation patterns. Grimmenodon aureum , gen. et sp. nov., is the second unambiguously identified pycnodontiform species from the Early Jurassic, in addition to Eomesodon liassicus from the early Lower Jurassic of western Europe. We also report an indeterminate pycnodontiform tooth crown from the upper Pliensbachian ( Pleuroceras apyrenum ammonite subzone) of the same site. The material expands the Early Jurassic range of pycnodontiforms significantly northwards and confirms their presence before and immediately following the onset of the Toarcian Oceanic Anoxic Event (T-OAE) in the marginal marine ecosystems south of the Fennoscandian Shield. Moreover, the new records indicate that the Early Jurassic diversity of pycnodontiform fishes was greater than previously assumed and probably equaled that of the Late Triassic. Therefore, it is hypothesized that the Triassic-Jurassic mass extinction event did not affect pycnodontiform fishes significantly. Micro-computed tomography was used to study the internal anatomy of the prearticular of Grimmenodon aureum , gen. et sp. nov. Our results show that no replacement teeth were formed within the tooth-bearing bone but rather were added posteriorly to functional teeth. http://zoobank.org/urn:lsid:zoobank.org:pub:A56BDE9C-40C4-4CFA-9C2E-F5FA35A66F2 Citation for this article: Stumpf, S., J. Ansorge, C. Pfaff, and J. Kriwet. 2017. Early Jurassic diversification of pycnodontiform fishes (Actinopterygii, Neopterygii) after the end-Triassic extinction event: Evidence from a new genus and species, Grimmenodon aureum . Journal of Vertebrate Paleontology. DOI: 10.1080/02724634.2017.1344679.

Compositions, sources and depositional environments of organic matter from the Middle Jurassic clays of Poland

International Nuclear Information System (INIS)

Marynowski, Leszek; Zaton, Michal; Simoneit, Bernd R.T.; Otto, Angelika; Jedrysek, Mariusz O.; Grelowski, Cezary; Kurkiewicz, Slawomir

2007-01-01

The comprehensive biomarker characteristics from previously undescribed Middle Jurassic clays of Poland are presented. The molecular composition of the organic matter (OM) derived from clays of Aalenian to Callovian age has not changed significantly through time. High relative concentrations of many biomarkers typical for terrestrial material suggest a distinct dominance of OM derived from land plants. Increasing concentrations of C 29 -diaster-13(17)-enes towards the northern part of the basin indicate an increase in terrestrial input. This terrestrial material would have originated from the enhanced transport of organic matter from land situated at the northern bank of the basin, i.e., the Fennoscandian Shield. The organic matter was deposited in an oxic to suboxic environment, as indicated by relatively low concentrations of C 33 -C 35 homohopanes, moderate to high Pr/Ph ratio values, an absence of compounds characteristic for anoxia and water column stratification, such as isorenieratane, aryl isoprenoids and gammacerane, as well as common benthic fauna and burrows. δ 18 O measurements from calcitic rostra of belemnites suggest that the mean value of the Middle Jurassic sea-water temperature of the Polish Basin was 13.1 deg. C. It is suggested that this mirrored the temperature of the lower water column because belemnites are considered here to be necto-benthic. The organic matter from the Middle Jurassic basin of Poland is immature. This is clearly indicated by a large concentration of biomarkers with the biogenic configurations, such as ββ-hopanes, hop-13(18)-enes, hop-17(21)-enes, diasterenes and sterenes. The identification of preserved, unaltered biomolecules like ferruginol, 6,7-dehydroferruginol and sugiol in Protopodocarpoxylon wood samples from these sediments present particularly strong evidence for the presence of immature OM in the Middle Jurassic sediments. Moreover, the occurrence of these polar diterpenoids is important due to the fact that

Validation and Clinical Utility of the hERG IC50:Cmax Ratio to Determine the Risk of Drug-Induced Torsades de Pointes: A Meta-Analysis.

Science.gov (United States)

Lehmann, David F; Eggleston, William D; Wang, Dongliang

2018-03-01

Use of the QT interval corrected for heart rate (QTc) on the electrocardiogram (ECG) to predict torsades de pointes (TdP) risk from culprit drugs is neither sensitive nor specific. The ratio of the half-maximum inhibitory concentration of the hERG channel (hERG IC50) to the peak serum concentration of unbound drug (C max ) is used during drug development to screen out chemical entities likely to cause TdP. To validate the use of the hERG IC50:C max ratio to predict TdP risk from a culprit drug by its correlation with TdP incidence. Medline (between 1966 and March 2017) was accessed for hERG IC50 and C max values from the antihistamine, fluoroquinolone, and antipsychotic classes to identify cases of drug-induced TdP. Exposure to a culprit drug was estimated from annual revenues reported by the manufacturer. Inclusion criteria for TdP cases were provision of an ECG tracing that demonstrated QTc prolongation with TdP and normal serum values of potassium, calcium, and magnesium. Cases reported in patients with a prior rhythm disturbance and those involving a drug interaction were excluded. The Meta-Analysis of Observational Studies in Epidemiology checklist was used for epidemiological data extraction by two authors. Negligible risk drugs were defined by an hERG IC50:C max ratio that correlated with less than a 5% chance of one TdP event for every 100 million exposures (relative risk [RR] 1.0). The hERG IC50:C max ratio correlated with TdP risk (0.312; 95% confidence interval 0.205-0.476, pratio of 80 (RR 1.0). The RR from olanzapine is on par with loratadine; ziprasidone is comparable with ciprofloxacin. Drugs with an RR greater than 50 include astemizole, risperidone, haloperidol, and thioridazine. The hERG IC50:C max ratio was correlated with TdP incidence for culprit drugs. This validation provides support for the potential use of the hERG IC50:C max ratio for clinical decision making in instances of drug selection where TdP risk is a concern. © 2018

Singing Sand Dunes

Indian Academy of Sciences (India)

ble low-frequency (s. 75–105 Hz), that can some- times be heard up to 10 km away. Scientific in- vestigations suggest that the sustained low fre- quency sound of sand dunes that resembles a pure note from a musical instrument, is due to the synchronized motion of well-sorted dry sand grains when they spontaneously ...

Jurassic ash-flow sheets, calderas, and related intrusions of the Cordilleran volcanic arc in southeastern Arizona: implications for regional tectonics and ore deposits

Science.gov (United States)

Lipman, P.W.; Hagstrum, J.T.

1992-01-01

Volcanologic, petrologic, and paleomagnetic studies of widespread Jurassic ash-flow sheets in the Huachuca-southern Dragoon Mountains area have led to identification of four large source calderas and associated comagnetic intracaldera intrusions. Stratigraphic, facies, and contact features of the caldera-related tuffs also provide constraints on the locations, lateral displacements, and very existence for some major northwest-trending faults and inferred regional thrusts in southeastern Arizona. Silicic alkalic compositions of the Jurassic caldera-related, ash-flow tuffs; bimodal associated mafic magmatism; and interstratified coarse sedimentary deposits provide evidence for synvolcanic extension and rifting within the Cordilleran magmatic arc. Gold-copper mineralization is associated with subvolcanic intrusions at several of the Jurassic calderas. -from Authors

The search for a source rock for the giant Tar Sand triangle accumulation, southeastern Utah

Science.gov (United States)

Huntoon, J.E.; Hansley, P.L.; Naeser, N.D.

1999-01-01

for the White Rim oil. The most attractive potential sources for White Rim oil include beds within one or more of the following formations: the Proterozoic Chuar Group, which is present in the subsurface southwest of the Tar Sand triangle; the Mississippian Delle Phosphatic Member of the Deseret Limestone and equivalent formations, the Permian Kaibab Limestone, the Sinbad Limestone Member of the Triassic Moenkopi Formation, and the Jurassic Arapien Shale, Twin Creek Limestone, and Carmel Formation, which are present west of the Tar Sand triangle; the Pennsylvanian Paradox Formation in the Paradox basin east of the Tar Sand triangle; and the Permian Park City Formation northwest of the Tar Sand triangle. Each formation has a high total organic carbon content and is distributed over a wide enough geographic area to have provided a huge volume of oil. Source beds in all of the formations reached thermal maturity at times prior to or during the time that migration into the White Rim is interpreted to have occurred. Based on all available data, the most likely source for the Tar Sand triangle appears to be the Mississippian Delle Phosphatic Member of the Deseret Limestone. Secondary migration out of the Delle is interpreted to have occurred during the Cretaceous, during Sevier thrusting. Subsequent tertiary migration into the Tar Sand triangle reservoir is interpreted to have occurred later, during middle Tertiary Laramide deformation.

Multivariate and Cladistic Analyses of Isolated Teeth Reveal Sympatry of Theropod Dinosaurs in the Late Jurassic of Northern Germany.

Science.gov (United States)

Gerke, Oliver; Wings, Oliver

2016-01-01

Remains of theropod dinosaurs are very rare in Northern Germany because the area was repeatedly submerged by a shallow epicontinental sea during the Mesozoic. Here, 80 Late Jurassic theropod teeth are described of which the majority were collected over decades from marine carbonates in nowadays abandoned and backfilled quarries of the 19th century. Eighteen different morphotypes (A-R) could be distinguished and 3D models based on micro-CT scans of the best examples of all morphotypes are included as supplements. The teeth were identified with the assistance of discriminant function analysis and cladistic analysis based on updated datamatrices. The results show that a large variety of theropod groups were present in the Late Jurassic of northern Germany. Identified specimens comprise basal Tyrannosauroidea, as well as Allosauroidea, Megalosauroidea cf. Marshosaurus, Megalosauridae cf. Torvosaurus and probably Ceratosauria. The formerly reported presence of Dromaeosauridae in the Late Jurassic of northern Germany could not be confirmed. Some teeth of this study resemble specimens described as pertaining to Carcharodontosauria (morphotype A) and Abelisauridae (morphotype K). This interpretation is however, not supported by discriminant function analysis and cladistic analysis. Two smaller morphotypes (N and Q) differ only in some probably size-related characteristics from larger morphotypes (B and C) and could well represent juveniles of adult specimens. The similarity of the northern German theropods with groups from contemporaneous localities suggests faunal exchange via land-connections in the Late Jurassic between Germany, Portugal and North America.

Multivariate and Cladistic Analyses of Isolated Teeth Reveal Sympatry of Theropod Dinosaurs in the Late Jurassic of Northern Germany.

Directory of Open Access Journals (Sweden)

Oliver Gerke

Full Text Available Remains of theropod dinosaurs are very rare in Northern Germany because the area was repeatedly submerged by a shallow epicontinental sea during the Mesozoic. Here, 80 Late Jurassic theropod teeth are described of which the majority were collected over decades from marine carbonates in nowadays abandoned and backfilled quarries of the 19th century. Eighteen different morphotypes (A-R could be distinguished and 3D models based on micro-CT scans of the best examples of all morphotypes are included as supplements. The teeth were identified with the assistance of discriminant function analysis and cladistic analysis based on updated datamatrices. The results show that a large variety of theropod groups were present in the Late Jurassic of northern Germany. Identified specimens comprise basal Tyrannosauroidea, as well as Allosauroidea, Megalosauroidea cf. Marshosaurus, Megalosauridae cf. Torvosaurus and probably Ceratosauria. The formerly reported presence of Dromaeosauridae in the Late Jurassic of northern Germany could not be confirmed. Some teeth of this study resemble specimens described as pertaining to Carcharodontosauria (morphotype A and Abelisauridae (morphotype K. This interpretation is however, not supported by discriminant function analysis and cladistic analysis. Two smaller morphotypes (N and Q differ only in some probably size-related characteristics from larger morphotypes (B and C and could well represent juveniles of adult specimens. The similarity of the northern German theropods with groups from contemporaneous localities suggests faunal exchange via land-connections in the Late Jurassic between Germany, Portugal and North America.

Oxycodone is associated with dose-dependent QTc prolongation in patients and low-affinity inhibiting of hERG activity in vitro

DEFF Research Database (Denmark)

Fanoe, Søren; Jensen, Gorm Boje; Sjøgren, Per

2008-01-01

with the use of these drugs. WHAT THIS PAPER ADDS: This study is the first to show that oxycodone dose is associated with QT prolongation and in vitro blockade of hERG channels expressed in HEK293. Neither morphine nor tramadol doses are associated with the QT interval length. AIMS: During recent years some...... and TdP could be a more general problem associated with the use of these drugs. The aims of this study were to evaluate the association between different opioids and the QTc among patients and measure hERG activity under influence by opioids in vitro. METHODS: One hundred chronic nonmalignant pain...... patients treated with methadone, oxycodone, morphine or tramadol were recruited in a cross-sectional study. The QTc was estimated from a 12-lead ECG. To examine hERG activity in the presence of oxycodone, electrophysiological testing was conducted using Xenopus laevis oocytes and HEK293 cells expressing h...

Anomalous Late Jurassic motion of the Pacific Plate with implications for true polar wander

Science.gov (United States)

Fu, R. R.; Kent, D.

2017-12-01

True polar wander, or TPW, is the rotation of the entire mantle-crust system that results in simultaneous change in latitude and orientation for all lithospheric plates. One of the most recent candidate TPW events consists of a 30˚ rotation during Late Jurassic time (160 - 145 Ma). However, existing paleomagnetic documentation of this event derives exclusively from continental studies. Because all major landmasses except China were connected directly or via spreading centers in the Late Jurassic, the velocities of these continents were mutually constrained and their motion as a group over the underlying mantle would be indistinguishable from TPW using only continental data. On the other hand, plates of the Pacific Basin constituted a kinematically independent domain, interfacing with continents at subduction zones and slip-strike boundaries. Coherent motion of both Pacific Basin and continental plates would therefore indicate uniform motion of virtually the entire lithosphere, providing a means to distinguish TPW from continental drift. We performed thermal demagnetization on remaining samples from Ocean Drilling Program (ODP) Site 801B, which were cored from the oldest sampled oceanic crust in the Western Pacific, to determine its change in paleolatitude during the Late Jurassic and Early Cretaceous (167 - 134 Ma). We find that the Pacific Plate likely underwent a steady southward drift during this time period, consistent with previous results from magnetic anomalies, except for an episode of northward motion between Oxfordian and Tithonian time (161 - 147 Ma). Although the amplitude of this northward shift is subject to significant uncertainty due to the sparse recovery of core samples, the trajectory of the Pacific Plate is most simply explained by TPW in the 160 - 145 Ma interval as inferred from continental data. Furthermore, such an interpretation is consistent with the sense of shear inferred at the Farallon-North American Plate boundary, whereas uniform

Total petroleum systems of the Pelagian Province, Tunisia, Libya, Italy, and Malta; the Bou Dabbous, Tertiary and Jurassic-Cretaceous composite

Science.gov (United States)

Klett, T.R.

2001-01-01

Undiscovered conventional oil and gas resources were assessed within total petroleum systems of the Pelagian Province (2048) as part of the U.S. Geological Survey World Petroleum Assessment 2000. The Pelagian Province is located mainly in eastern Tunisia and northwestern Libya. Small portions of the province extend into Malta and offshore Italy. Although several petroleum systems may exist, only two ?composite? total petroleum systems were identified. Each total petroleum system comprises a single assessment unit. These total petroleum systems are called the Bou Dabbous?Tertiary and Jurassic-Cretaceous Composite, named after the source-rock intervals and reservoir-rock ages. The main source rocks include mudstone of the Eocene Bou Dabbous Formation; Cretaceous Bahloul, Lower Fahdene, and M?Cherga Formations; and Jurassic Nara Formation. Known reservoirs are in carbonate rocks and sandstone intervals throughout the Upper Jurassic, Cretaceous, and Tertiary sections. Traps for known accumulations include fault blocks, low-amplitude anticlines, high-amplitude anticlines associated with reverse faults, wrench fault structures, and stratigraphic traps. The estimated means of the undiscovered conventional petroleum volumes in total petroleum systems of the Pelagian Province are as follows: [MMBO, million barrels of oil; BCFG, billion cubic feet of gas; MMBNGL, million barrels of natural gas liquids] Total Petroleum System MMBO BCFG MMBNGL Bou Dabbous?Tertiary 667 2,746 64 Jurassic-Cretaceous Composite 403 2,280 27

Performance of Machine Learning Algorithms for Qualitative and Quantitative Prediction Drug Blockade of hERG1 channel.

Science.gov (United States)

Wacker, Soren; Noskov, Sergei Yu

2018-05-01

Drug-induced abnormal heart rhythm known as Torsades de Pointes (TdP) is a potential lethal ventricular tachycardia found in many patients. Even newly released anti-arrhythmic drugs, like ivabradine with HCN channel as a primary target, block the hERG potassium current in overlapping concentration interval. Promiscuous drug block to hERG channel may potentially lead to perturbation of the action potential duration (APD) and TdP, especially when with combined with polypharmacy and/or electrolyte disturbances. The example of novel anti-arrhythmic ivabradine illustrates clinically important and ongoing deficit in drug design and warrants for better screening methods. There is an urgent need to develop new approaches for rapid and accurate assessment of how drugs with complex interactions and multiple subcellular targets can predispose or protect from drug-induced TdP. One of the unexpected outcomes of compulsory hERG screening implemented in USA and European Union resulted in large datasets of IC 50 values for various molecules entering the market. The abundant data allows now to construct predictive machine-learning (ML) models. Novel ML algorithms and techniques promise better accuracy in determining IC 50 values of hERG blockade that is comparable or surpassing that of the earlier QSAR or molecular modeling technique. To test the performance of modern ML techniques, we have developed a computational platform integrating various workflows for quantitative structure activity relationship (QSAR) models using data from the ChEMBL database. To establish predictive powers of ML-based algorithms we computed IC 50 values for large dataset of molecules and compared it to automated patch clamp system for a large dataset of hERG blocking and non-blocking drugs, an industry gold standard in studies of cardiotoxicity. The optimal protocol with high sensitivity and predictive power is based on the novel eXtreme gradient boosting (XGBoost) algorithm. The ML-platform with XGBoost

A new long-proboscid genus of Pseudopolycentropodidae (Mecoptera from the Middle Jurassic of China and its plant-host specializations

Directory of Open Access Journals (Sweden)

ChungKun Shih

2011-09-01

Full Text Available We describe a new genus and species of Mecoptera with siphonate mouthparts, Sinopolycentropus rasnitsyni gen. et sp. n., assigned to the family Pseudopolycentropodidae Handlirsch, 1925. The specimen was collected from late middle Jurassic nonmarine strata of the Jiulongshan Formation in Inner Mongolia, northeastern China. The new material provides additional evidence for an early diversification of pseudopolycentropodids that was ongoing during the middle Jurassic. This diversity also adds to the variety of known pseudopolycentropodids with tubular proboscides that apparently fed on ovulate fluids produced by Mesozoic gymnosperms.

Geochemical characterization of the Jurassic Amran deposits from Sharab area (SW Yemen): Origin of organic matter, paleoenvironmental and paleoclimate conditions during deposition

Science.gov (United States)

Hakimi, Mohammed Hail; Abdullah, Wan Hasiah; Makeen, Yousif M.; Saeed, Shadi A.; Al-Hakame, Hitham; Al-Moliki, Tareq; Al-Sharabi, Kholah Qaid; Hatem, Baleid Ali

2017-05-01

Calcareous shales and black limestones of the Jurassic Amran Group, located in the Sharab area (SW Yemen), were analysed based on organic and inorganic geochemical methods. The results of this study were used to reconstruct the paleoenvironmental and paleoclimatic conditions during Jurassic time and their relevance to organic matter enrichment during deposition of the Amran calcareous shale and black limestone deposits. The analysed Amran samples have present-day TOC and Stotal content values in the range of 0.25-0.91 wt % and 0.59-4.96 wt %, respectively. The relationship between Stotal and TOC contents indicates that the Jurassic Amran deposits were deposited in a marine environment as supported by biomarker environmental indicators. Biomarker distributions also reflect that the analysed Amran deposits received high contributions of marine organic matter (e.g., algal and microbial) with minor amount of land plant source inputs. Low oxygen (reducing) conditions during deposition of the Jurassic Amran deposits are indicated from low Pr/Ph values and relatively high elemental ratios of V/Ni and V/(V + Ni). Enrichment in the pyrite grains and very high DOPT and high Fe/Al ratios further suggest reducing bottom waters. This paleo-redox (i.e., reducing) conditions contributed to preservation of organic matter during deposition of the Jurassic Amran deposits. Semi-arid to warm climatic conditions are also evidenced during deposition of the Amran sediments and consequently increased biological productivity within the photic zone of the water column during deposition. Therefore, the increased bio-productivity in combination with good preservation of organic matter identified as the major mechanisms that gave rise to organic matter enrichment. This contradicts with the low organic matter content of the present-day TOC values of less than 1%. The biomarker maturity data indicate that the analysed Amran samples are of high thermal maturity; therefore, the low present-day TOC

Tracking Early Jurassic marine (de)oxygenation

Science.gov (United States)

Them, T. R., II; Caruthers, A. H.; Gill, B. C.; Gröcke, D. R.; Marroquín, S. M.; Owens, J. D.

2017-12-01

It has been suggested that the carbon cycle was perturbed during the Toarcian OAE (T-OAE) as observed in the carbon isotope record, and more recently other elemental cycles (e.g., Hg, Mo, Os, S). The most widely accepted hypothesis focuses on the emplacement of the Karoo-Ferrar large igneous province, outgassing of greenhouse gases, and subsequent feedbacks in the Earth system, which caused severe environmental change and biological turnover. Feedbacks to elevated atmospheric pCO2 include enhanced weathering rates, dissociation of methane clathrates, increased terrestrial methanogenesis, and widespread marine anoxia. The sequence of events related to the development and duration of marine anoxia are not well constrained for this time interval due to a lack of open-ocean geochemical records. In order to reconstruct the timing of marine deoxygenation during the Early Jurassic T-OAE, we have utilized thallium isotopes, a novel geochemical proxy from multiple anoxic basins in North America and Germany. Three sites representing a basin transect from the Western Canada Sedimentary Basin, and one site from the South German Basin, were chosen to reconstruct the thallium isotopic composition (ɛ205Tl) of the ocean. The ɛ205Tl composition of sediments deposited under anoxic and euxinic water columns records the global seawater ɛ205Tl composition, a function of the amount of manganese oxides that are precipitated. Increased geographic extent of marine anoxia will cause a decrease in manganese oxide precipitation and perturb the thallium system. Importantly, the inputs of thallium are nearly identical, thus changes in these fluxes cannot drive the observed perturbation. Our new Early Jurassic ɛ205Tl records suggest that the onset of marine deoxygenation occurred concurrently with Karoo-Ferrar magmatism in the late Pliensbachian and continued until after the T-OAE. These new data support a Karoo-Ferrar trigger of the T-OAE. However, thallium isotopes also suggest that

``High energy Electron exPeriment (HEP)'' onboard the ERG satellite

Science.gov (United States)

Mitani, T.; Takashima, T.; Kasahara, S.; Miyake, W.; Hirahara, M.

2017-12-01

The Exploration of energization and Radiation in Geospace (ERG) satellite was successfully launched on December 20, 2016, and now explores how relativistic electrons in the radiation belts are generated during space storms. "High energy Electron exPeriment (HEP)" onboard the ERG satellite observes 70 keV - 2 MeV electrons and provides three-dimensional velocity distribution of electrons every spacecraft spin period. Electrons are observed by two types of camera designs, HEP-L and HEP-H, with regard to geometrical factor and energy range. HEP-L observes 0.1 - 1 MeV electrons and its geometrical factor (G-factor) is 10-3 cm2 str, and HEP-H observes 0.7 - 2 MeV and G-factor is 10-2 cm2 str. HEP-L and HEP-H each consist of three pin-hole type cameras, and each camera consist of mechanical collimator, stacked silicon semiconductor detectors and readout ASICs. HEP-H has larger opening angle of the collimator and more silicon detectors to observe higher energy electrons than HEP-L. The initial checkout in orbit was carried out in February 2017 and it was confirmed that there was no performance degradation by comparing the results of the initial checkout in orbit and the prelaunch function tests. Since late March, HEP has carried out normal observation. HEP observed losses and recovery of the outer radiation belt electrons several times up to now. In this presentation we introduce the HEP instrument design, prelaunch tests results and report the initial results in orbit.

Review of the Upper Jurassic-Lower Cretaceous stratigraphy in Western Cameros basin, Northern Spain

DEFF Research Database (Denmark)

Vidal, Maria del Pilar Clemente

2010-01-01

The Upper Jurassic-Lower Cretaceous stratigraphy of the Cameros basin has been reviewed. In Western Cameros the stratigraphic sections are condensed but they have a parallel development with the basin depocentre and the same groups have been identified. The Tera Group consists of two formations: ...

New ophthalmosaurid ichthyosaurs from the European Lower Cretaceous demonstrate extensive ichthyosaur survival across the Jurassic-Cretaceous boundary.

Directory of Open Access Journals (Sweden)

Valentin Fischer

Full Text Available BACKGROUND: Ichthyosauria is a diverse clade of marine amniotes that spanned most of the Mesozoic. Until recently, most authors interpreted the fossil record as showing that three major extinction events affected this group during its history: one during the latest Triassic, one at the Jurassic-Cretaceous boundary (JCB, and one (resulting in total extinction at the Cenomanian-Turonian boundary. The JCB was believed to eradicate most of the peculiar morphotypes found in the Late Jurassic, in favor of apparently less specialized forms in the Cretaceous. However, the record of ichthyosaurs from the Berriasian-Barremian interval is extremely limited, and the effects of the end-Jurassic extinction event on ichthyosaurs remains poorly understood. METHODOLOGY/PRINCIPAL FINDINGS: Based on new material from the Hauterivian of England and Germany and on abundant material from the Cambridge Greensand Formation, we name a new ophthalmosaurid, Acamptonectes densus gen. et sp. nov. This taxon shares numerous features with Ophthalmosaurus, a genus now restricted to the Callovian-Berriasian interval. Our phylogenetic analysis indicates that Ophthalmosauridae diverged early in its history into two markedly distinct clades, Ophthalmosaurinae and Platypterygiinae, both of which cross the JCB and persist to the late Albian at least. To evaluate the effect of the JCB extinction event on ichthyosaurs, we calculated cladogenesis, extinction, and survival rates for each stage of the Oxfordian-Barremian interval, under different scenarios. The extinction rate during the JCB never surpasses the background extinction rate for the Oxfordian-Barremian interval and the JCB records one of the highest survival rates of the interval. CONCLUSIONS/SIGNIFICANCE: There is currently no evidence that ichthyosaurs were affected by the JCB extinction event, in contrast to many other marine groups. Ophthalmosaurid ichthyosaurs remained diverse from their rapid radiation in the Middle

Astronomical constraints on the duration of the Early Jurassic Pliensbachian Stage and global climatic fluctuations

Science.gov (United States)

Ruhl, Micha; Hesselbo, Stephen P.; Hinnov, Linda; Jenkyns, Hugh C.; Xu, Weimu; Riding, James B.; Storm, Marisa; Minisini, Daniel; Ullmann, Clemens V.; Leng, Melanie J.

2016-12-01

The Early Jurassic was marked by multiple periods of major global climatic and palaeoceanographic change, biotic turnover and perturbed global geochemical cycles, commonly linked to large igneous province volcanism. This epoch was also characterised by the initial break-up of the super-continent Pangaea and the opening and formation of shallow-marine basins and ocean gateways, the timing of which are poorly constrained. Here, we show that the Pliensbachian Stage and the Sinemurian-Pliensbachian global carbon-cycle perturbation (marked by a negative shift in δ13 C of 2- 4 ‰), have respective durations of ∼8.7 and ∼2 Myr. We astronomically tune the floating Pliensbachian time scale to the 405 Kyr eccentricity solution (La2010d), and propose a revised Early Jurassic time scale with a significantly shortened Sinemurian Stage duration of 6.9 ± 0.4 Myr. When calibrated against the new time scale, the existing Pliensbachian seawater 87Sr/86Sr record shows relatively stable values during the first ∼2 Myr of the Pliensbachian, superimposed on the long-term Early Jurassic decline in 87Sr/86Sr. This plateau in 87Sr/86Sr values coincides with the Sinemurian-Pliensbachian boundary carbon-cycle perturbation. It is possibly linked to a late phase of Central Atlantic Magmatic Province (CAMP) volcanism that induced enhanced global weathering of continental crustal materials, leading to an elevated radiogenic strontium flux to the global ocean.

Field test on sand compaction pile method with copper slag sand; Dosuisai slag wo mochiita SCP koho no shiken seko

Energy Technology Data Exchange (ETDEWEB)

Minami, K.; Matsui, H.; Naruse, E.; Kitazume, M. [Port and Harbour Research Inst., Kanagawa (Japan)

1997-09-20

This paper describes the sand compaction pile (SCP) method using copper slag sand. The SCP method is a method by which sand compaction piles are constructed in the ground, and improvement can be obtained in a short period. This method has been widely used even in the port areas for enhancing the bearing power of soft clay ground and the lateral resistance of sheet pile. A great deal of sand is required as a material. The sand requires high permeability, proper size distribution with less fine particle fraction content, easy compaction property with enough strength, and easy discharging property from the casing of construction machines as required properties. Recently, it becomes hard to secure proper sand materials. The copper slag sand is obtained from refining process of copper as a by-product which is quenched in water flow and crushed in water. The copper slag sand has higher particle density than that of sand, excellent permeability, and similar size distribution to that of sand. From compaction drainage triaxial compression test and permeability test, it was found that the mechanical properties of copper slag sand did not change by the crushing of grains with keeping excellent permeability. Through the test construction, applicability of the copper slag sand to the SCP method could be confirmed as an alternate material of sand. 17 refs., 9 figs., 4 tabs.

Geochemical Astro- and Geochronological Constraints on the Early Jurassic

Science.gov (United States)

Storm, M.; Condon, D. J.; Ruhl, M.; Jenkyns, H. C.; Hesselbo, S. P.; Al-Suwaidi, A. H.; Percival, L.

2017-12-01

The Early Jurassic Hettangian and Sinemurian time scales are poorly defined due to the lack of continuous geochemical records, and the temporal constrain of the Toarcian Oceanic Anoxic Event and associated global carbon cycle perturbation is afflicted by geochemical and biostratigraphical uncertainties of the existing radiometric dates from various volcanic ash bearing sections. Here we present a continuous, orbitally paced Hettangian to Pliensbachian carbon-isotope record of the Mochras drill-core (Cardigan bay Basin, UK). The record generates new insights into the evolution and driving mechanisms of the Early Jurassic carbon cycle, and is contributing to improve the Hettangian and Sinemurian time scale. Furthermore, we introduce a new high-resolution carbon-isotope chemostratigraphy, integrated with ammonite biostratigraphy and new U/Pb single zircon geochronology of the Las Overas section (Neuquén Basin, Argentina). The studied section comprises sediments from the tenuicostatum to Dumortiera Andean Ammonite zone (tenuicostatum to levesqui European standard zones). A stratigraphically expanded negative shift in d13Corg values, from -24‰ down to -32­‰, appears in the tenuicostatum and hoelderi ammonite zone, coeval to the negative excursion in European realm which is associated with the Toarcian Oceanic Anoxic Event. The negative isotope excursion appears concomitant with an increase in sedimentary mercury levels, indicating enhanced volcanic activity. TOC values and elemental data suggest a high sedimentation dilution in the tenuicostatum to pacificum zone. The new geochronological data from several volcanic ash beds throughout the section are further improving the temporal correlation between the Early Toarcian isotope event and causal mechanisms

The bivalve Anopaea (Inoceramidae) from the Upper Jurassic-lowermost Cretaceous of Mexico

Science.gov (United States)

Zell, Patrick; Crame, J. Alistair; Stinnesbeck, Wolfgang; Beckmann, Seija

2015-07-01

In Mexico, the Upper Jurassic to lowermost Cretaceous La Casita and coeval La Caja and La Pimienta formations are well-known for their abundant and well-preserved marine vertebrates and invertebrates. The latter include conspicuous inoceramid bivalves of the genus Anopaea not formally described previously from Mexico. Anopaea bassei (Lecolle de Cantú, 1967), Anopaea cf. stoliczkai (Holdhaus, 1913), Anopaea cf. callistoensis Crame and Kelly, 1995 and Anopaea sp. are rare constituents in distinctive Tithonian-lower Berriasian levels of the La Caja Formation and one Tithonian horizon of the La Pimienta Formation. Anopaea bassei was previously documented from the Tithonian of central Mexico and Cuba, while most other members of Anopaea described here are only known from southern high latitudes. The Mexican assemblage also includes taxa which closely resemble Anopaea stoliczkai from the Tithonian of India, Indonesia and the Antarctic Peninsula, and Anopaea callistoensis from the late Tithonian to ?early Berriasian of the Antarctic Peninsula. Our new data expand the palaeogeographical distribution of the high latitude Anopaea to the Gulf of Mexico region and substantiate faunal exchange, in the Late Jurassic-earliest Cretaceous, between Mexico and the Antarctic Realm.

Discovery of the first ichthyosaur from the Jurassic of India: Implications for Gondwanan palaeobiogeography.

Directory of Open Access Journals (Sweden)

Guntupalli V R Prasad

Full Text Available An articulated and partially preserved skeleton of an ichthyosaur was found in the Upper Jurassic (Upper Kimmeridgian Katrol Formation exposed at a site south of the village Lodai in Kachchh district, Gujarat (western India. Here we present a detailed description and inferred taxonomic relationship of the specimen. The present study revealed that the articulated skeleton belongs to the family Ophthalmosauridae. The new discovery from India further improves the depauperate fossil record of ichthyosaurs from the former Gondwanan continents. Based on the preserved length of the axial skeleton and anterior part of the snout and taking into account the missing parts of the skull and postflexural region, it is suggested that the specimen may represent an adult possibly reaching a length of 5.0-5.5 m. The widespread occurrence of ophthalmosaurids in the Upper Jurassic deposits of western Tethys, Madagascar, South America and India points to possible faunal exchanges between the western Tethys and Gondwanan continents through a southern seaway.

Galveston Island, Texas, Sand Management Strategies

Science.gov (United States)

2016-07-01

billion m3 of beach quality sand . However, Texas projects to date have not utilized these sources because of transportation costs. The lack of nearby...estimate that the San Luis Pass flood shoal contains approximately 11.8 million yd3 of beach quality sand . However, it is expected that if permits...a source of beach- quality sand . 2. Sand could be intercepted before it reaches the present dry beach. ERDC/CHL TR-16-13 55 3. The volume of

Discontinuities Characteristics of the Upper Jurassic Arab-D Reservoir Equivalent Tight Carbonates Outcrops, Central Saudi Arabia

Science.gov (United States)

Abdlmutalib, Ammar; Abdullatif, Osman

2017-04-01

Jurassic carbonates represent an important part of the Mesozoic petroleum system in the Arabian Peninsula in terms of source rocks, reservoirs, and seals. Jurassic Outcrop equivalents are well exposed in central Saudi Arabia and which allow examining and measuring different scales of geological heterogeneities that are difficult to collect from the subsurface due to limitations of data and techniques. Identifying carbonates Discontinuities characteristics at outcrops might help to understand and predict their properties and behavior in the subsurface. The main objective of this study is to identify the lithofacies and the discontinuities properties of the upper Jurassic carbonates of the Arab D member and the Jubaila Formation (Arab-D reservoir) based on their outcrop equivalent strata in central Saudi Arabia. The sedimentologic analysis revealed several lithofacies types that vary in their thickness, abundances, cyclicity and vertical and lateral stacking patterns. The carbonates lithofacies included mudstone, wackestone, packstone, and grainstone. These lithofacies indicate deposition within tidal flat, skeletal banks and shallow to deep lagoonal paleoenvironmental settings. Field investigations of the outcrops revealed two types of discontinuities within Arab D Member and Upper Jubaila. These are depositional discontinuities and tectonic fractures and which all vary in their orientation, intensity, spacing, aperture and displacements. It seems that both regional and local controls have affected the fracture development within these carbonate rocks. On the regional scale, the fractures seem to be structurally controlled by the Central Arabian Graben System, which affected central Saudi Arabia. While, locally, at the outcrop scale, stratigraphic, depositional and diagenetic controls appear to have influenced the fracture development and intensity. The fracture sets and orientations identified on outcrops show similarity to those fracture sets revealed in the upper

Post-Jurassic tectonic evolution of Southeast Asia

Science.gov (United States)

Zahirovic, Sabin; Seton, Maria; Dietmar Müller, R.; Flament, Nicolas

2014-05-01

The accretionary growth of Asia, linked to long-term convergence between Eurasia, Gondwana-derived blocks and the Pacific, resulted in a mosaic of terranes for which conflicting tectonic interpretations exist. Here, we propose solutions to a number of controversies related to the evolution of Sundaland through a synthesis of published geological data and plate reconstructions that reconcile both geological and geophysical constraints with plate driving forces. We propose that West Sulawesi, East Java and easternmost Borneo rifted from northern Gondwana in the latest Jurassic, collided with an intra-oceanic arc at ~115 Ma and subsequently sutured to Sundaland by 80 Ma. Although recent models argue that the Southwest Borneo core accreted to Sundaland at this time, we use volcanic and biogeographic constraints to show that the core of Borneo was on the Asian margin since at least the mid Jurassic. This northward transfer of Gondwana-derived continental fragments required a convergent plate boundary in the easternmost Tethys that we propose gave rise to the Philippine Archipelago based on the formation of latest Jurassic-Early Cretaceous supra-subduction zone ophiolites on Halmahera, Obi Island and Luzon. The Late Cretaceous marks the shift from Andean-style subduction to back-arc opening on the east Asian margin. Arc volcanism along South China ceased by ~60 Ma due to the rollback of the Izanagi slab, leading to the oceanward migration of the volcanic arc and the opening of the Proto South China Sea (PSCS). We use the Apennines-Tyrrhenian system in the Mediterranean as an analogue to model this back-arc. Continued rollback detaches South Palawan, Mindoro and the Semitau continental blocks from the stable east Asian margin and transfers them onto Sundaland in the Eocene to produce the Sarawak Orogeny. The extrusion of Indochina and subduction polarity reversal along northern Borneo opens the South China Sea and transfers the Dangerous Grounds-Reed Bank southward to

Numerical simulation of aeolian sand ripples

International Nuclear Information System (INIS)

Kang Liqiang; Guo Liejin

2004-01-01

With a new horizontal saltation displacement vector, a model is implemented to simulate the initiation and evolution of aeolian sand ripples. In the model, saltation distance considers the effects of surface height and slope. A linear stability analysis is also carried out for formation of sand ripples. The results show that, the model can be able to successfully reproduce sand ripples which can increase in scale by merging of small ripples. The linear stability analysis indicates that sand ripples appear when the relaxation rate parameter is below a threshold value and wind strength parameter is larger than a critical value. The results also verified that the formation of sand ripples is a self-organization process

Japan's involvement in oil sands development

International Nuclear Information System (INIS)

Sugiura, T.

1994-01-01

According to Japanese national policy, exploration and development by Japanese companies in overseas countries are promoted in order to ensure stable oil supplies. Japan Canada Oil Sands Limited (JACOS), part of the JAPEX group, was established during the 1978 world oil crisis to explore and develop Canadian oil sand resources in accordance with Japan's national policy. The JAPEX group, including JACOS, has invested $123 million in oil sands projects in Alberta. JAPEX's first involvement in oil sands was in the Primrose Project operated by Norcen in the Cold Lake area. Five years of cyclic steam stimulation pilot tests did not produce sufficiently good results to justify further operation. The second involvement was the PCEJ Project, a joint effort by four companies that are participating in a bitumen recovery test project in the Athabasca Deposit. JACOS holds 2,452 km 2 of oil sands leases in Alberta. Tests conducted since 1978 in the PCEJ Project include multiwell steam injection pilot tests, some of which showed promise. JACOS is also participating in steam assisted gravity drainage projects and in federal/provincial research programs. Obstacles identified in developing Alberta oil sands are the lack of a bitumen pipeline to Edmonton and the insufficient length of oil sands leases (currently 10 years), given the difficulties of oil sand development. 10 figs

MouldingSandDB – a modern database storing moulding sands properties research results

Directory of Open Access Journals (Sweden)

J. Jakubski

2011-01-01

Full Text Available The complexity of foundry processes requires the use of modern, advanced IT tools for optimization, storage and analysis of t echnicaldata. Properties of moulding and core sands that are collected in research laboratories, manufacturers, and finally in the foundries, are not in use later on. It seems important to create a database that will allow to use the results stored, along with the possibility of searching according to set criteria, adjusted to casting practice. This paper presents part of the database named „MouldingSandDB”, which allows to collect and search data for synthetic moulding sands.

Si-Metasomatism During Serpentinization of Jurassic Ultramafic Sea-floor: a Comparative Study

Science.gov (United States)

Vogel, M.; Frueh-Green, G. L.; Boschi, C.; Schwarzenbach, E. M.

2014-12-01

The Bracco-Levanto ophiolitic complex (northwestern Italy) represents one of the largest and better-exposed ophiolitic successions in the Northern Apennines. It is considered to be a fragment of heterogeneous Jurassic lithosphere that records tectono-magmatic and alteration histories similar to those documented along the Mid-Atlantic Ridge (MAR), such as at the 15°20'N area and the Atlantis Massif at 30°N. Structural and petrological studies on these rocks provide constraints on metamorphic/deformation processes during formation and hydrothermal alteration of the Jurassic oceanic lithosphere. We present a petrological and geochemical study of serpentinization processes and fluid-rock interaction in the Bracco-Levanto ophiolitic complex and compare these to published data from modern oceanic hydrothermal systems, such as the Lost City hydrothermal field hosted in serpentinites on the Atlantis Massif. Major element and mineral compositional data allow us to distinguish a multiphase history of alteration characterized by: (1) widespread Si-metasomatism during progressive serpentinization, and (2) multiple phases of veining and carbonate precipitation associated with circulation of seawater in the shallow ultramafic-dominated portions of the Jurassic seafloor, resulting in the formation of ophicalcites. In detail, regional variations in Si, Mg and Al content are observed in zones of ophicalcite formation, indicating metasomatic reactions and Si-Al transport during long-lived fluid-rock interaction and channelling of hydrothermal fluids. Rare earth element and isotopic analysis indicate that the Si-rich fluids are derived from alteration of pyroxenes to talc and tremolite in ultramafic rocks at depth. Comparison with serpentinites from the Atlantis Massif and 15°20'N indicates a similar degree of Si-enrichment in the modern seafloor and suggests that Si-metasomatism may be a fundamental process associated with serpentinization at slow-spreading ridge environments

Policy Analysis of the Canadian Oil Sands Experience

Energy Technology Data Exchange (ETDEWEB)

None, None

2013-09-01

For those who support U.S. oil sands development, the Canadian oil sands industry is often identified as a model the U.S. might emulate, yielding financial and energy security benefits. For opponents of domestic oil sands development, the Canadian oil sands experience illustrates the risks that opponents of development believe should deter domestic policymakers from incenting U.S. oil sands development. This report does not seek to evaluate the particular underpinnings of either side of this policy argument, but rather attempts to delve into the question of whether the Canadian experience has relevance as a foundational model for U.S. oil sands development. More specifically, this report seeks to assess whether and how the Canadian oil sands experience might be predictive or instructive in the context of fashioning a framework for a U.S. oil sands industry. In evaluating the implications of these underpinnings for a prospective U.S. oil sands industry, this report concentrates on prospective development of the oil sands deposits found in Utah.

A study of global sand seas

Science.gov (United States)

McKee, Edwin D.

1979-01-01

The birth of the idea that led to this publication on "Global Sand Seas" dates back to the late 1920's. At that time I was engaged in a study of the Coconino Sandstone of Arizona's Grand Canyon. Considerable controversy existed then as to whether this sandstone was a subaqueous deposit or was composed of wind-formed dunes. It became apparent that definitive literature was sparse or lacking on types of dunes, global distribution of these types, the mechanics of their development, the precise nature of their internal structure of cross-stratificiation, and the relation of wind systems to these sand forms. Especially lacking were data on criteria that could confidently be used in the recognition of ancient dunes. The common denominator in this publication is eolian sand bodies. Although the book is concerned primarily with desert sand seas, the subject matter is not restricted to deserts; it includes many references to deposits of coastal sand and to sand bodies in humid climates. Nor does the book deal exclusively with dunes, which, according to most definitions, involve mounds or hills. Many references are made to sand sheets, sand stringers, and other types of sand deposits that have no prominent topographic expression. All sand bodies accumulated by the action of wind are discussed. Chapters A-J of this publication are primarily topical. Chapters cover the grain texture, the color, and the structure of modern dunes and other eolian sands. Special treatment is given to the relation of wind data to dune interpretation, the evolution of form in current-deposited sand bodies as determined from experimental studies, and the discriminant analysis technique for differentiating between coastal and inland desert sands. This topical part of the publication also includes an analysis of criteria used in ancient deposits to interpret their eolian genesis and a consideration of economic application of the principles described, including a discussion of potentials and problems

Anomalous Late Jurassic motion of the Pacific Plate with implications for true polar wander

Science.gov (United States)

Fu, Roger R.; Kent, Dennis V.

2018-05-01

True polar wander, or TPW, is the rotation of the entire mantle-crust system about an equatorial axis that results in a coherent velocity contribution for all lithospheric plates. One of the most recent candidate TPW events consists of a ∼30° rotation during Late Jurassic time (160-145 Ma). However, existing paleomagnetic documentation of this event derives exclusively from continents, which compose less than 50% of the Earth's surface area and may not reflect motion of the entire mantle-crust system. Additional paleopositional information from the Pacific Basin would significantly enhance coverage of the Earth's surface and allow more rigorous testing for the occurrence of TPW. We perform paleomagnetic analyses on core samples from Ocean Drilling Program (ODP) Site 801B, which were taken from the oldest available Pacific crust, to determine its paleolatitude during the Late Jurassic and Early Cretaceous (167-133 Ma). We find that the Pacific Plate underwent a steady southward drift of 0.49°-0.74° My-1 except for an interval between Kimmeridgian and Tithonian time (157-147 Ma), during which it underwent northward motion at 1.45° ± 0.76° My-1 (1σ). This trajectory indicates that the plates of the Pacific Basin participated in the same large-amplitude (∼30°) rotation as continental lithosphere in the 160-145 Ma interval. Such coherent motion of a large majority of the Earth's surface strongly supports the occurrence of TPW, suggesting that a combination of subducting slabs and rising mantle plumes was sufficient to significantly perturb the Earth's inertia tensor in the Late Jurassic.

Equatorial seawater temperatures and latitudinal temperature gradients during the Middle to Late Jurassic: the stable isotope record of brachiopods and oysters from Gebel Maghara, Egypt

Science.gov (United States)

Alberti, Matthias; Fürsich, Franz T.; Abdelhady, Ahmed A.; Andersen, Nils

2017-04-01

The Jurassic climate has traditionally been described as equable, warmer than today, with weak latitudinal temperature gradients, and no polar glaciations. This view changed over the last decades with studies pointing to distinct climate fluctuations and the occasional presence of polar ice caps. Most of these temperature reconstructions are based on stable isotope analyses of fossil shells from Europe. Additional data from other parts of the world is slowly completing the picture. Gebel Maghara in the northern Sinai Peninsula of Egypt exposes a thick Jurassic succession. After a phase of terrestrial sedimentation in the Early Jurassic, marine conditions dominated since the end of the Aalenian. The stable isotope (δ18O, δ13C) composition of brachiopod and oyster shells was used to reconstruct seawater temperatures from the Bajocian to the Kimmeridgian at a palaeolatitude of ca. 3°N. Throughout this time interval, temperatures were comparatively constant aorund an average of 25.7°C. Slightly warmer conditions existed in the Early Bathonian ( 27.0°C), while the Kimmeridgian shows the lowest temperatures ( 24.3°C). The seasonality has been reconstructed with the help of high-resolution sampling of two oyster shells and was found to be very low (temperature gradients. During the Middle Jurassic, this gradient was much steeper than previously expected and comparable to today. During the Kimmeridgian, temperatures in Europe were generally warmer leading to weaker latitudinal gradients. Based on currently used estimates for the δ18O value of seawater during the Jurassic, reconstructed water temperatures for localities above the thermocline in Egypt and Europe were mostly lower than Recent sea-surface temperatures. These results improve our understanding of the Jurassic climate and its influence on marine faunal diversity patterns.

Petrogenesis of Jurassic granitoids at the northeastern margin of the North China Craton: New geochemical and geochronological constraints on subduction of the Paleo-Pacific Plate

Science.gov (United States)

Liu, Jin; Zhang, Jian; Liu, Zhenghong; Yin, Changqing; Zhao, Chen; Peng, Youbo

2018-06-01

At the junction between the North China Craton (NCC) and the Central Asian Orogenic Belt (CAOB), northern Liaoning province, NE China, there are widespread Jurassic igneous rocks. The tectonic setting and petrogenesis of these rocks are unresolved. Zircon U-Pb dating, whole-rock geochemistry, and Hf isotopic compositions of Jurassic granitoids were investigated to constrain their ages and petrogenesis in order to understand the tectonic evolution of the Paleo-Pacific Ocean along the northeastern margin of the NCC. Geochronological data indicate that magmatism occurred between the early and late Jurassic (180-156 Ma). Despite the wide range in ages of the intrusions, Jurassic granitoids were likely derived from a similar or common source, as inferred from their geochemical and Hf isotopic characteristics. Compared to the island arc andesite-dacite-rhyolite series, the Jurassic granitoids are characterized by higher SiO2, Al2O3, and Sr contents, and lower MgO, FeOT, Y, and Yb contents, indicating that the primary magmas show typical characteristics of adakitic magmas derived from partial melting of thickened lower crust. These findings, combined with their εHf(t) values (+1.4 to +5.4) and two-stage model ages (1515-1165 Ma), indicate the primary magmas originated from partial melting of juvenile crustal material accreted during the Mesoproterozoic. They are enriched in large-ion lithophile elements (e.g., Rb, K, Th, Ba, and U) and light rare-earth elements (REE), and depleted in high-field-strength elements (e.g., Nb, Ta, Ti, and P) and heavy REE. Based on these findings and previous studies, we suggest that the Jurassic adakitic granitoids (180-156 Ma) were formed in an active continental margin and compressive tectonic setting, related to subduction of the Paleo-Pacific Plate.

Neutron activation analysis in geochemical characterization of Jurassic-Cretaceous sedimentary rocks from the Nordvik Peninsula

Czech Academy of Sciences Publication Activity Database

Mizera, Jiří; Řanda, Zdeněk; Košťák, M.

2010-01-01

Roč. 284, č. 1 (2010), s. 211-219 ISSN 0236-5731 Institutional research plan: CEZ:AV0Z10480505 Keywords : Jurassic-Cretaceous boundary * Nordvik Peninsula * Iridium anomaly Subject RIV: BG - Nuclear, Atomic and Molecular Physics, Colliders Impact factor: 0.777, year: 2010

The Requel: Between the Remake and the Sequel. Jurassic World as a Case Study Analysis

Directory of Open Access Journals (Sweden)

Irene RAYA BRAVO

2017-06-01

Full Text Available In the audiovisual field, the expansion of the stories is, specifically, materialized through remakes, adaptations and franchises. In this context, the remakes or new versions are recurrent formulas because they recover familiar contents for audiences and, at the same time, they reinvent it in order to capture new generations’ attention. Nevertheless, the remake formula has been changing in the new millennium, adapting to new narrative trends. In recent years, because of the rise of intertextuality and the increasing value of nostalgia, many films have been produced halfway between the remake and the sequel, such as Star Wars. Episode VII: The Force Awakens or Terminator Genisys. In particular, the aim of this paper is to make a comparative analysis between Jurassic Park and Jurassic World because, although this last film extends the original discourse as a sequel, it also offers a reinterpretation of the first film.

Numerical simulation of wind-sand movement in the reversed flow region of a sand dune with a bridge built downstream.

Science.gov (United States)

He, Wei; Huang, Ning; Xu, Bin; Wang, Wenbo

2018-04-23

A bridge built inside the reversed flow region of a sand dune will change the characteristics of wind-sand movement in this region. The Reynolds-averaged Navier-Stokes simulation and discrete particle tracing are used to simulate the wind-sand movement around a sand dune with a bridge built inside the reversed region. Three cases with different bridge positions are studied. The results show that 1) compared with the isolated dune case, a tall bridge built at the leeward toe leads to an increase in the deposition rate on the leeward slope and a longer reversed flow region downstream of the sand dune; meanwhile, the high speed of crosswind on the bridge indicates that some measures should be taken to protect trains from strong crosswind; 2) a low bridge at the leeward toe has little effect on the sand deposition and reversed flow region of the dune; however, low sand transport rate and crosswind speed on the bridge show that anti-crosswind/sand measures should be taken according to the actual situation and 3) a low bridge on the leeward slope has little effect on the length of reversed flow region, however, high crosswind speed and sand flux on the bridge reveal the need of anti-crosswind/sand measures on the bridge. Moreover, the bridges in the reversed flow region increase the sand flux near the leeward crest; as a result, the moving patterns of the sand dune are changed.

Tracing biosignatures from the Recent to the Jurassic in sabkha-associated microbial mats

Science.gov (United States)

van der Land, Cees; Dutton, Kirsten; Andrade, Luiza; Paul, Andreas; Sherry, Angela; Fender, Tom; Hewett, Guy; Jones, Martin; Lokier, Stephen W.; Head, Ian M.

2017-04-01

Microbial mat ecosystems have been operating at the sediment-fluid interface for over 3400 million years, influencing the flux, transformation and preservation of carbon from the biosphere to the physical environment. These ecosystems are excellent recorders of rapid and profound changes in earth surface environments and biota as they often survive crisis-induced extreme paleoenvironmental conditions. Their biosignatures, captured in the preserved organic matter and the biominerals that form the microbialite rock, constitute a significant tool in understanding geobiological processes and the interactions of the microbial communities with sediments and with the prevailing physical chemical parameters, as well as the environmental conditions at a local and global scale. Nevertheless, the exact pathways of diagenetic organic matter transformation and early-lithification, essential for the accretion and preservation in the geological record as microbialites, are not well understood. The Abu Dhabi coastal sabkha system contains a vast microbial mat belt that is dominated by continuous polygonal and internally-laminated microbial mats across the upper and middle intertidal zones. This modern system is believed to be the best analogue for the Upper Jurassic Arab Formation, which is both a prolific hydrocarbon reservoir and source rock facies in the United Arab Emirates and in neighbouring countries. In order to characterise the processes that lead to the formation of microbialites we investigated the modern and Jurassic system using a multidisciplinary approach, including growth of field-sampled microbial mats under controlled conditions in the laboratory and field-based analysis of microbial communities, mat mineralogy and organic biomarker analysis. In this study, we focus on hydrocarbon biomarker data obtained from the surface of microbial mats actively growing in the intertidal zone of the modern system. By comparing these findings to data obtained from recently

High resolution stratigraphy of the Jurassic-Cretaceous boundary interval in the Gresten Klippenbelt (Austria)

Czech Academy of Sciences Publication Activity Database

Lukeneder, A.; Halásová, E.; Kroh, A.; Mayrhofer, S.; Pruner, Petr; Reháková, D.; Schnabl, Petr; Sprovieri, M.; Wagreich, M.

2010-01-01

Roč. 61, č. 5 (2010), s. 365-381 ISSN 1335-0552 R&D Projects: GA ČR GA205/07/1365 Institutional research plan: CEZ:AV0Z30130516 Keywords : Jurassic/Cretaceous boundary * Penninic Ocean, * paleoecology * paleogeography * environmental changes Subject RIV: DB - Geology ; Mineralogy Impact factor: 0.909, year: 2010

Facultative Sterol Uptake in an Ergosterol-Deficient Clinical Isolate of Candida glabrata Harboring a Missense Mutation in ERG11 and Exhibiting Cross-Resistance to Azoles and Amphotericin B

Science.gov (United States)

Hull, Claire M.; Parker, Josie E.; Bader, Oliver; Weig, Michael; Gross, Uwe; Warrilow, Andrew G. S.; Kelly, Diane E.

2012-01-01

We identified a clinical isolate of Candida glabrata (CG156) exhibiting flocculent growth and cross-resistance to fluconazole (FLC), voriconazole (VRC), and amphotericin B (AMB), with MICs of >256, >256, and 32 μg ml−1, respectively. Sterol analysis using gas chromatography-mass spectrometry (GC-MS) revealed that CG156 was a sterol 14α-demethylase (Erg11p) mutant, wherein 14α-methylated intermediates (lanosterol was >80% of the total) were the only detectable sterols. ERG11 sequencing indicated that CG156 harbored a single-amino-acid substitution (G315D) which nullified the function of native Erg11p. In heterologous expression studies using a doxycycline-regulatable Saccharomyces cerevisiae erg11 strain, wild-type C. glabrata Erg11p fully complemented the function of S. cerevisiae sterol 14α-demethylase, restoring growth and ergosterol synthesis in recombinant yeast; mutated CG156 Erg11p did not. CG156 was culturable using sterol-free, glucose-containing yeast minimal medium (glcYM). However, when grown on sterol-supplemented glcYM (with ergosta 7,22-dienol, ergosterol, cholestanol, cholesterol, Δ7-cholestenol, or desmosterol), CG156 cultures exhibited shorter lag phases, reached higher cell densities, and showed alterations in cellular sterol composition. Unlike comparator isolates (harboring wild-type ERG11) that became less sensitive to FLC and VRC when cultured on sterol-supplemented glcYM, facultative sterol uptake by CG156 did not affect its azole-resistant phenotype. Conversely, CG156 grown using glcYM with ergosterol (or with ergosta 7,22-dienol) showed increased sensitivity to AMB; CG156 grown using glcYM with cholesterol (or with cholestanol) became more resistant (MICs of 2 and >64 μg AMB ml−1, respectively). Our results provide insights into the consequences of sterol uptake and metabolism on growth and antifungal resistance in C. glabrata. PMID:22615281

The human ether-a-go-go-related gene (hERG) current inhibition selectively prolongs action potential of midmyocardial cells to augment transmural dispersion.

Science.gov (United States)

Yasuda, C; Yasuda, S; Yamashita, H; Okada, J; Hisada, T; Sugiura, S

2015-08-01

The majority of drug induced arrhythmias are related to the prolongation of action potential duration following inhibition of rapidly activating delayed rectifier potassium current (I(Kr)) mediated by the hERG channel. However, for arrhythmias to develop and be sustained, not only the prolongation of action potential duration but also its transmural dispersion are required. Herein, we evaluated the effect of hERG inhibition on transmural dispersion of action potential duration using the action potential clamp technique that combined an in silico myocyte model with the actual I(Kr) measurement. Whole cell I(Kr) current was measured in Chinese hamster ovary cells stably expressing the hERG channel. The measured current was coupled with models of ventricular endocardial, M-, and epicardial cells to calculate the action potentials. Action potentials were evaluated under control condition and in the presence of 1, 10, or 100 μM disopyramide, an hERG inhibitor. Disopyramide dose-dependently increased the action potential durations of the three cell types. However, action potential duration of M-cells increased disproportionately at higher doses, and was significantly different from that of epicardial and endocardial cells (dispersion of repolarization). By contrast, the effects of disopyramide on peak I(Kr) and instantaneous current-voltage relation were similar in all cell types. Simulation study suggested that the reduced repolarization reserve of M-cell with smaller amount of slowly activating delayed rectifier potassium current levels off at longer action potential duration to make such differences. The action potential clamp technique is useful for studying the mechanism of arrhythmogenesis by hERG inhibition through the transmural dispersion of repolarization.

Sand dune tracking from satellite laser altimetry

Science.gov (United States)

Dabboor, Mohammed

Substantial problems arise from sand movement in arid and semi-arid countries. Sand poses a threat to infrastructure, agricultural and urban areas. These issues are caused by the encroachment of sand on roads and railway tracks, farmland, towns and villages, and airports, to name a few. Sand movement highly depends on geomorphology including vegetation cover, shape and height of the terrain, and grain size of the sand. However, wind direction and speed are the most important factors that affect efficient sand movement. The direction of the movement depends on the main direction of the wind, but it has been shown that a minimum wind speed is required, e.g. wind gusts, to initiate sand transport. This fact prevents a simple calculation of sand transport from conventional wind data as wind records rarely contain sub-minute intervals masking out any wind gusts. An alternative of predicting sand transport is the direct observation of sand advance by in situ measurements or via satellite. Until recently, satellite imagery was the only means to compare dune shape and position for predicting dune migration over several years. In 2003, the NASA laser altimetry mission ICESat became operational and monitors elevations over all surface types including sand dunes with an accuracy of about 10-20 cm. In this study, ICESat observations from repeat tracks (tracks overlapping eachother within 50 m) are used to derive sand dune advance and direction. The method employs a correlation of the elevation profiles over several dunes and was sucessfully validated with synthetic data. The accuracy of this method is 5 meters of dune advance. One of the most active areas exhibiting sand and dune movement is the area of the Arabian Peninsula. Approximately one-third of the Arabian Peninsula is covered by sand dunes. Different wind regimes (Shamal, Kaus) cause sand dune movement in the selected study area in the eastern part of the Arabian Peninsula between 20-25 degrees North and 45-55 degrees

Possible trace fossils of putative termite origin in the Lower Jurassic (Karoo Supergroup of South Africa and Lesotho

Directory of Open Access Journals (Sweden)

O. Catuneanu

2010-01-01

Full Text Available Complex structures in the sandstones of the Lower Jurassic aeolian Clarens Formation (Karoo Supergroup are found at numerous localities throughout southern Africa, and can be assigned to five distinct architectural groups: (1 up to 3.3-m high, free-standing, slab-shaped forms of bioturbated sandstones with elliptical bases, orientated buttresses and an interconnecting large burrow system; (2 up to 1.2-m high, free-standing, irregular forms of bioturbated sandstones with 2-cm to 4-cm thick, massive walls, empty chambers and vertical shafts; (3 about 0.15-m to 0.25-m high, mainly bulbous, multiple forms with thin walls (larger than 2 cm, hollow chambers with internal pillars and bridges; (4 about 0.15-m to 0.2-m (maximum 1-m high, free-standing forms of aggregated solitary spheres associated with massive horizontal, orientated capsules or tubes, and meniscate tubes; and (5 about 5 cmin diameter, ovoid forms with weak internal shelving in a close-fitting cavity. Based on size, wall thickness, orientation and the presence of internal chambers, these complex structures are tentatively interpreted as ichnofossils of an Early Jurassic social organism; the different architectures are reflective of the different behaviours of more than one species, the history of structural change in architectural forms (ontogenetic series or an architectural adaptation to local palaeoclimatic variability. While exact modern equivalents are unknown, some of these ichnofossils are comparable to nests (or parts of nests constructed by extant termites, and thus these Jurassic structures are very tentatively interpreted here as having been made by a soil-dwelling social organism, probably of termite origin. This southern African discovery, along with reported Triassic and Jurassic termite ichnofossils from North America, supports previous hypotheses that sociality in insects, particularity in termites, likely evolved prior to the Pangea breakup in the Early Mesozoic.

The First Metriorhynchid Crocodylomorph from the Middle Jurassic of Spain, with Implications for Evolution of the Subclade Rhacheosaurini

Science.gov (United States)

Parrilla-Bel, Jara; Young, Mark T.; Moreno-Azanza, Miguel; Canudo, José Ignacio

2013-01-01

Background Marine deposits from the Callovian of Europe have yielded numerous species of metriorhynchid crocodylomorphs. While common in English and French Formations, metriorhynchids are poorly known from the Iberian Peninsula. Twenty years ago an incomplete, but beautifully preserved, skull was discovered from the Middle Callovian of Spain. It is currently the oldest and best preserved metriorhynchid specimen from the Iberian Peninsula. Until now it has never been properly described and its taxonomic affinities remained obscure. Methodology/Principal Findings Here we present a comprehensive description for this specimen and in doing so we refer it to a new genus and species: Maledictosuchus riclaensis. This species is diagnosed by numerous autapomorphies, including: heterodont dentition; tightly interlocking occlusion; lachrymal anterior process excludes the jugal from the preorbital fenestra; orbits longer than supratemporal fenestrae; palatine has two non-midline and one midline anterior processes. Our phylogenetic analysis finds Maledictosuchus riclaensis to be the basal-most known member of Rhacheosaurini (the subclade of increasingly mesopelagic piscivores that includes Cricosaurus and Rhacheosaurus). Conclusions/Significance Our description of Maledictosuchus riclaensis shows that the craniodental morphologies that underpinned the success of Rhacheosaurini in the Late Jurassic and Early Cretaceous, as a result of increasing marine specialization to adaptations for feeding on fast small-bodied prey (i.e. divided and retracted external nares; reorientation of the lateral processes of the frontal; elongate, tubular rostrum; procumbent and non-carinated dentition; high overall tooth count; and dorsolaterally inclined paroccipital processes), first appeared during the Middle Jurassic. Rhacheosaurins were curiously rare in the Middle Jurassic, as only one specimen of Maledictosuchus riclaensis is known (with no representatives discovered from the well

The Study of the plasmaspheric refilling using the data from the ERG, the VAPs, the ground-based magnetometers and the IPE model

Science.gov (United States)

Obana, Y.; Maruyama, N.; Masahito, N.; Matsuoka, A.; Teramoto, M.; Nomura, R.; Fujimoto, A.; Tanaka, Y.; Shinohara, M.; Kasahara, Y.; Matsuda, S.; Kumamoto, A.; Tsuchiya, F.; Yoshizumi, M.; Shinohara, I.

2017-12-01

Earth's inner magnetosphere is a complex dynamical region of geo space comprising plasma populations with wide energy ranges, the plasmasphere, ring current, and radiation belts. They form a closely coupled system, thus, the plasmasphere is the lowest energy population in the inner magnetosphere, but the accurate prediction of the evolution of the plasmasphere is critical in understanding the dynamics of the inner magnetosphere, which include even the highest energy population, the radiation belts. In this study, we study plasmaspheric refilling following geomagnetic storms using data from ERG-MGF, ERG-PWE, RBSP-EMFISIS and Ground-based magneto­meters. DC magnetic field data measured by ERG-MGF, RBSP-EMFISIS and ground-based magnetometers provides the frequency of the toroidal mode field line resonances. From this information, the equatorial plasma mass density is estimated by solving the MHD wave equation for suitable models of the magnetic field and the field line density distribution. ERG-PWE and RBSP-EMFISIS provide measurements of wave electric and magnetic field, thus we can estimate the local electron density from the plasma wave spectrograms by identifying narrow-band emission at the upper-hybrid resonance frequency. Furthermore, using Ionosphere Plasmasphere Electrodynamics Model (IPE), we calculate the plasmaspheric refilling rates and evaluate the relative contribution of various mechanisms (heating, neutral particle density, composition and wings, etc.) to the refilling rate.

The Late Jurassic Panjeh submarine volcano in the northern Sanandaj-Sirjan Zone, northwest Iran: Mantle plume or active margin?

Science.gov (United States)

Azizi, Hossein; Lucci, Federico; Stern, Robert J.; Hasannejad, Shima; Asahara, Yoshihiro

2018-05-01

The tectonic setting in which Jurassic igneous rocks of the Sanandaj-Sirjan Zone (SaSZ) of Iran formed is controversial. SaSZ igneous rocks are mainly intrusive granodiorite to gabbroic bodies, which intrude Early to Middle Jurassic metamorphic basement; Jurassic volcanic rocks are rare. Here, we report the age and petrology of volcanic rocks from the Panjeh basaltic-andesitic rocks complex in the northern SaSZ, southwest of Ghorveh city. The Panjeh magmatic complex consists of pillowed and massive basalts, andesites and microdioritic dykes and is associated with intrusive gabbros; the overall sequence and relations with surrounding sediments indicate that this is an unusually well preserved submarine volcanic complex. Igneous rocks belong to a metaluminous sub-alkaline, medium-K to high-K calc-alkaline mafic suite characterized by moderate Al2O3 (13.7-17.6 wt%) and variable Fe2O3 (6.0-12.6 wt%) and MgO (0.9-11.1 wt%) contents. Zircon U-Pb ages (145-149 Ma) define a Late Jurassic (Tithonian) age for magma crystallization and emplacement. Whole rock compositions are enriched in Th, U and light rare earth elements (LREEs) and are slightly depleted in Nb, Ta and Ti. The initial ratios of 87Sr/86Sr (0.7039-0.7076) and εNd(t) values (-1.8 to +4.3) lie along the mantle array in the field of ocean island basalts and subcontinental metasomatized mantle. Immobile trace element (Ti, V, Zr, Y, Nb, Yb, Th and Co) behavior suggests that the mantle source was enriched by fluids released from a subducting slab (i.e. deep-crustal recycling) with some contribution from continental crust for andesitic rocks. Based the chemical composition of Panjeh mafic and intermediate rocks in combination with data for other gabbroic to dioritic bodies in the Ghorveh area we offer two interpretations for these (and other Jurassic igneous rocks of the SaSZ) as reflecting melts from a) subduction-modified OIB-type source above a Neo-Tethys subduction zone or b) plume or rift tectonics involving

Facies and carbon/oxygen isotopes of the Calabozo Formation (Middle Jurassic), Arroyo La Vaina, Mendoza, Argentina

International Nuclear Information System (INIS)

Cabaleri, N.G.; Valencio, S.A.; Cagnoni, M.C.; Ramos, A.M.; Armella, C.; Panarello, H.O; Riccardi, A.C

2001-01-01

Facial / microfacial studies and geochemical isotopic analyses on marine jurassic carbonates of the Calabozo Formation (Dessanti, 1973) were carried out to reconstruct the palaeoenvironment and postdepositional history of the unit. This study is part of a project which purpose is the sedimentological and geochemical characterization of the Jurassic carbonate sequences of Cuenca Neuquina, in the southwestern Mendoza, Argentina. A detailed description about this basin can be found in Legarreta and Uliana (1999) and Riccardi et al. (2000). During the Late Bathonian and Early Callovian, the basin showed a reduction of the sedimentation area and a marked marginal facies progradation. West of Malargue, in areas with low detritic contribution, limestones of the Calabozo Formation were deposited. At the end of the Early Callovian, the basin was isolated, prevailing hypersaline conditions which caused the accumulation of the evaporites of the Tabanos Formation (Stipanicic, 1966) (au)

Structural refinement of the hERG1 pore and voltage-sensing domains with ROSETTA-membrane and molecular dynamics simulations.

Science.gov (United States)

Subbotina, Julia; Yarov-Yarovoy, Vladimir; Lees-Miller, James; Durdagi, Serdar; Guo, Jiqing; Duff, Henry J; Noskov, Sergei Yu

2010-11-01

The hERG1 gene (Kv11.1) encodes a voltage-gated potassium channel. Mutations in this gene lead to one form of the Long QT Syndrome (LQTS) in humans. Promiscuous binding of drugs to hERG1 is known to alter the structure/function of the channel leading to an acquired form of the LQTS. Expectably, creation and validation of reliable 3D model of the channel have been a key target in molecular cardiology and pharmacology for the last decade. Although many models were built, they all were limited to pore domain. In this work, a full model of the hERG1 channel is developed which includes all transmembrane segments. We tested a template-driven de-novo design with ROSETTA-membrane modeling using side-chain placements optimized by subsequent molecular dynamics (MD) simulations. Although backbone templates for the homology modeled parts of the pore and voltage sensors were based on the available structures of KvAP, Kv1.2 and Kv1.2-Kv2.1 chimera channels, the missing parts are modeled de-novo. The impact of several alignments on the structure of the S4 helix in the voltage-sensing domain was also tested. Herein, final models are evaluated for consistency to the reported structural elements discovered mainly on the basis of mutagenesis and electrophysiology. These structural elements include salt bridges and close contacts in the voltage-sensor domain; and the topology of the extracellular S5-pore linker compared with that established by toxin foot-printing and nuclear magnetic resonance studies. Implications of the refined hERG1 model to binding of blockers and channels activators (potent new ligands for channel activations) are discussed. © 2010 Wiley-Liss, Inc.

bentonite-sand mixture as new backfill/buffer material

International Nuclear Information System (INIS)

Cui Suli; Liu Jisheng; Zhang Huyuan; Liang Jian

2008-01-01

The mixture of bentonite and quartz sand is suggested as a new backfill/buffer material for geological disposal of HLW. To improve the further design of underground laboratory and in-situ industrial construction test, the optimization of sand addition to bentonite is focused at present research stage. Based on summarizing the research results abroad, laboratory tests were conducted on the mixture of GMZ001 bentonite and quartz sand, such as compaction test and swelling tests etc. Test data shows that GMZ bentonite-sand mixture exhibits a favorite compaction with a 30% sand addition, a highest swelling pressure with a 20% sand addition, and a decreasing plasticity with increases in sand addition and pore liquid concentration. (authors)

Neutron activation analysis in geochemical characterization of Jurassic-Cretaceous sedimentary rocks from the Nordvik Peninsula

Czech Academy of Sciences Publication Activity Database

Mizera, Jiří; Řanda, Z.; Košťák, M.

2010-01-01

Roč. 284, č. 1 (2010), s. 211-219 ISSN 0236-5731 Institutional research plan: CEZ:AV0Z30460519 Keywords : Jurassic-Cretaceous boundary * Nordvik Peninsula * Iridium anomaly Subject RIV: BG - Nuclear, Atomic and Molecular Physics, Colliders OBOR OECD: Geology Impact factor: 0.777, year: 2010

Comparison between predicted and observed sand waves and sand banks in the North Sea

NARCIS (Netherlands)

Hulscher, Suzanne J.M.H.; van den Brink, G.M.

2001-01-01

For the first time a prediction model of regular morphological patterns on the seabed was tested against observations of sand wave and sand bank occurrence in the entire North Sea. The model, which originates from first physical principles, predicts this occurrence via two dimensionless parameters

The oldest known snakes from the Middle Jurassic-Lower Cretaceous provide insights on snake evolution.

Science.gov (United States)

Caldwell, Michael W; Nydam, Randall L; Palci, Alessandro; Apesteguía, Sebastián

2015-01-27

The previous oldest known fossil snakes date from ~100 million year old sediments (Upper Cretaceous) and are both morphologically and phylogenetically diverse, indicating that snakes underwent a much earlier origin and adaptive radiation. We report here on snake fossils that extend the record backwards in time by an additional ~70 million years (Middle Jurassic-Lower Cretaceous). These ancient snakes share features with fossil and modern snakes (for example, recurved teeth with labial and lingual carinae, long toothed suborbital ramus of maxillae) and with lizards (for example, pronounced subdental shelf/gutter). The paleobiogeography of these early snakes is diverse and complex, suggesting that snakes had undergone habitat differentiation and geographic radiation by the mid-Jurassic. Phylogenetic analysis of squamates recovers these early snakes in a basal polytomy with other fossil and modern snakes, where Najash rionegrina is sister to this clade. Ingroup analysis finds them in a basal position to all other snakes including Najash.

Critical State of Sand Matrix Soils

Science.gov (United States)

Marto, Aminaton; Tan, Choy Soon; Makhtar, Ahmad Mahir; Kung Leong, Tiong

2014-01-01

The Critical State Soil Mechanic (CSSM) is a globally recognised framework while the critical states for sand and clay are both well established. Nevertheless, the development of the critical state of sand matrix soils is lacking. This paper discusses the development of critical state lines and corresponding critical state parameters for the investigated material, sand matrix soils using sand-kaolin mixtures. The output of this paper can be used as an interpretation framework for the research on liquefaction susceptibility of sand matrix soils in the future. The strain controlled triaxial test apparatus was used to provide the monotonic loading onto the reconstituted soil specimens. All tested soils were subjected to isotropic consolidation and sheared under undrained condition until critical state was ascertain. Based on the results of 32 test specimens, the critical state lines for eight different sand matrix soils were developed together with the corresponding values of critical state parameters, M, λ, and Γ. The range of the value of M, λ, and Γ is 0.803–0.998, 0.144–0.248, and 1.727–2.279, respectively. These values are comparable to the critical state parameters of river sand and kaolin clay. However, the relationship between fines percentages and these critical state parameters is too scattered to be correlated. PMID:24757417

Production and global transport of Titan's sand particles

Science.gov (United States)

Barnes, Jason W.; Lorenz, Ralph D.; Radebaugh, Jani; Hayes, Alexander G.; Arnold, Karl; Chandler, Clayton

2015-06-01

Previous authors have suggested that Titan's individual sand particles form by either sintering or by lithification and erosion. We suggest two new mechanisms for the production of Titan's organic sand particles that would occur within bodies of liquid: flocculation and evaporitic precipitation. Such production mechanisms would suggest discrete sand sources in dry lakebeds. We search for such sources, but find no convincing candidates with the present Cassini Visual and Infrared Mapping Spectrometer coverage. As a result we propose that Titan's equatorial dunes may represent a single, global sand sea with west-to-east transport providing sources and sinks for sand in each interconnected basin. The sand might then be transported around Xanadu by fast-moving Barchan dune chains and/or fluvial transport in transient riverbeds. A river at the Xanadu/Shangri-La border could explain the sharp edge of the sand sea there, much like the Kuiseb River stops the Namib Sand Sea in southwest Africa on Earth. Future missions could use the composition of Titan's sands to constrain the global hydrocarbon cycle.

Ocean basin volume constraints on global sea level since the Jurassic

Science.gov (United States)

Seton, M.; Müller, R. D.

2011-12-01

Changes in the volume of the ocean basins, predominately via changes in the age-area distribution of oceanic lithosphere, have been suggested as the main driver for long-term eustatic sea-level change. As ocean lithosphere cools and thickens, ocean depth increases. The balance between the abundance of hot and buoyant crust along mid ocean ridges relative to abyssal plains is the primary driving force of long-term sea level changes. The emplacement of volcanic plateaus and chains as well as sedimentation contribute to raising eustatic sea level. Quantifying the average ocean basin depth through time primarily relies on the present day preserved seafloor spreading record, an analysis of the spatio-temporal record of plate boundary processes recorded on the continental margins adjacent to ocean basins as well as a consideration of the rules of plate tectonics, to reconstruct the history of seafloor spreading in the oceanic basins through time. This approach has been successfully applied to predict the magnitude and pattern of eustatic sea-level change since the Cretaceous (Müller et. al. 2008) but uncertainties in reconstructing mid ocean ridges and flanks increase back through time, given that we mainly depend on information preserved in preserved ocean crust. We have reconstructed the age-area distribution of oceanic lithosphere and the plate boundary configurations back to the Jurassic (200 Ma) in order to assess long-term sea-level change from amalgamation to dispersal of Pangaea. We follow the methodology presented in Müller et. al. (2008) but incorporate a new absolute plate motion model derived from Steinberger and Torsvik (2008) prior to 100 Ma, a merged Wessel et. al. (2006) and Wessel and Kroenke (2008) fixed Pacific hotspot reference frame, and a revised model for the formation of Panthalassa and the Cretaceous Pacific. Importantly, we incorporate a model for the break-up of the Ontong Java-Manihiki-Hikurangi plateaus between 120-86 Ma. We extend a

Enhanced oxidative killing of azole-resistant Candida glabrata strains with ERG11 deletion.

Science.gov (United States)

Kan, V L; Geber, A; Bennett, J E

1996-01-01

The susceptibility of genetically defined Candida glabrata strains to killing by H2O2 and neutrophils was assessed. Fluconazole-susceptible L5L and L5D strains demonstrated survival rates higher than those of two fluconazole-resistant strains lacking the ERG11 gene coding for 14 alpha-demethylase. Fluconazole resistance can occur by mechanisms which increase fungal susceptibility to oxidative killing by H2O2 and neutrophils. PMID:8807069

High temperature thermal energy storage in moving sand

Science.gov (United States)

Turner, R. H.; Awaya, H. I.

1978-01-01

Several high-temperature (to 500 C) heat-storage systems using sand as the storage medium are described. The advantages of sand as a storage medium include low cost for sand, widespread availability, non-toxicity, non-degradation characteristics, easy containment, and safety. The systems considered include: stationary sand with closely spaced tubes throughout the volume, the use of a fluidized bed, use of conveyor belt transporter, and the use of a blower rapid transport system. For a stationary sand bed, very close spacing of heat transfer tubes throughout the volume is required, manifesting as high power related system cost. The suggestion of moving sand past or around pipes is intended to reduce the power related costs at the penalty of added system complexity. Preliminary system cost estimates are offered. These rough calculations indicate that mobile sand heat storage systems cost less than the stationary sand approach.

Sand to Root Transfer of PAHs and PCBs by Carrots Grown on Sand with Pure Substances and Biosolids Amended Sand

OpenAIRE

Sablayrolles, Caroline; Montréjaud-Vignoles, Mireille; Silvestre, Jérôme; Patria, Lucie

2006-01-01

A study on behaviour of trace organic compounds (Polycyclic Aromatic Hydrocarbons, PAH, and Polychlorinated Biphenyls, PCB) in a sand-plant system has been carried out, with the reclamation of wastewater treatment plant biosolids for agriculture in mind. Carrot plants (Daucus carota) were grown on soilless culture (sand), to provide optimal transfer conditions, in plant containers inside a temperature regulated greenhouse. There were two types of experiment. The trace organic compounds have i...

Mesozoic authigenic carbonate deposition in the Arctic: Do glendonites record gas hydrate destabilization during the Jurassic?

Science.gov (United States)

Morales, Chloe; Suan, Guillaume; Wierzbowski, Hubert; Rogov, Mikhail; Teichert, Barbara; Kienhuis, Michiel V. M.; Polerecky, Lubos; Middelburg, Jack B. M.; Reichart, Gert-Jan; van de Schootbrugge, Bas

2015-04-01

Glendonites are calcite pseudomorphs after ikaite, an unstable hydrated calcium carbonate mineral. Because present-day ikaite occurs predominantly in sub-polar environments and is unstable at warm temperatures, glendonites have been used as an indicator of near-freezing conditions throughout Earth history. Ikaite has also been observed in cold deep-sea environments like the Gulf of Mexico, the Japan Trench, and the Zaire Fan where their formation is possibly governed by other parameters. The description of glendonites in Paleocene-Eocene sediments of Svalbard, and Early Jurassic (Pliensbachian) deposits of northern Germany, however questions the role of temperature on ikaite precipitation (Spielhagen and Tripati, 2009; Teichert and Luppold, 2013). Anomalously low carbon isotope values of Jurassic glendonites point to the involvement of methane as a possible carbon source for ikaite/glendonite formation. Terrestrial organic matter degradation is also frequently evoked as a potential source of carbon. The involved bio- and geochemical processes remains thus not well constrained. Here we present new geochemical data of a large number of glendonites specimens from the Lower and Middle Jurassic of northern Siberia and the Lena river middle flows (Bajocian, Bathonian, Pliensbachian). Carbon and oxygen isotopic values show comparable trends between the different sections. Bulk glendonites δ13C and δ18O values vary from 0.0 to -44.5o and -15.0 to -0.8 respectively and show a negative correlation. Some samples display similar low δ13C values as the Pliensbachian glendonites of Germany (Teichert and Luppold, 2013), suggesting thermogenic and/or biogenic methane sources. The range of carbon isotope values is comparable to those observed at other methane seeps deposits. Further investigations are needed to better constrain the carbon cycle in these particular environmental conditions. The role of microbial communities into ikaite/glendonite formation equally needs to be

hERG classification model based on a combination of support vector machine method and GRIND descriptors

DEFF Research Database (Denmark)

Li, Qiyuan; Jorgensen, Flemming Steen; Oprea, Tudor

2008-01-01

and diverse library of 495 compounds. The models combine pharmacophore-based GRIND descriptors with a support vector machine (SVM) classifier in order to discriminate between hERG blockers and nonblockers. Our models were applied at different thresholds from 1 to 40 mu m and achieved an overall accuracy up...

Analysis of wind-blown sand movement over transverse dunes.

Science.gov (United States)

Jiang, Hong; Huang, Ning; Zhu, Yuanjian

2014-12-01

Wind-blown sand movement often occurs in a very complicated desert environment where sand dunes and ripples are the basic forms. However, most current studies on the theoretic and numerical models of wind-blown sand movement only consider ideal conditions such as steady wind velocity, flat sand surface, etc. In fact, the windward slope gradient plays a great role in the lift-off and sand particle saltation. In this paper, we propose a numerical model for the coupling effect between wind flow and saltating sand particles to simulate wind-blown sand movement over the slope surface and use the SIMPLE algorithm to calculate wind flow and simulate sands transport by tracking sand particle trajectories. We furthermore compare the result of numerical simulation with wind tunnel experiments. These results prove that sand particles have obvious effect on wind flow, especially that over the leeward slope. This study is a preliminary study on windblown sand movement in a complex terrain, and is of significance in the control of dust storms and land desertification.

Onboard Processing on PWE OFA/WFC (Onboard Frequency Analyzer/Waveform Capture) aboard the ERG (ARASE) Satellite

Science.gov (United States)

Matsuda, S.; Kasahara, Y.; Kojima, H.; Kasaba, Y.; Yagitani, S.; Ozaki, M.; Imachi, T.; Ishisaka, K.; Kurita, S.; Ota, M.; Kumamoto, A.; Tsuchiya, F.; Yoshizumi, M.; Matsuoka, A.; Teramoto, M.; Shinohara, I.

2017-12-01

Exploration of energization and Radiation in Geospace (ERG) is a mission for understanding particle acceleration, loss mechanisms, and the dynamic evolution of space storms in the context of cross-energy and cross-regional coupling [Miyoshi et al., 2012]. The ERG (ARASE) satellite was launched on December 20, 2016, and successfully inserted into an orbit. The Plasma Wave Experiment (PWE) is one of the science instruments on board the ERG satellite to measure electric field and magnetic field in the inner magnetosphere. PWE consists of three sub-components, EFD (Electric Field Detector), OFA/WFC (Onboard Frequency Analyzer and Waveform Capture), and HFA (High Frequency Analyzer). Especially, OFA/WFC measures electric and magnetic field spectrum and waveform from a few Hz to 20 kHz. OFA/WFC processes signals detected by a couple of dipole wire-probe antenna (WPT) and tri-axis magnetic search coils (MSC) installed onboard the satellite. The PWE-OFA subsystem calculates and produces three kind of data; OFA-SPEC (power spectrum), OFA-MATRIX (spectrum matrix), and OFA-COMPLEX (complex spectrum). They are continuously processed 24 hours per day and all data are sent to the ground. OFA-MATRIX and OFA-COMPLEX are used for polarization analyses and direction finding of the plasma waves. The PWE-WFC subsystem measures raw (64 kHz sampled) and down-sampled (1 kHz sampled) burst waveform detected by the WPT and the MSC sensors. It activates by a command, automatic triggering, and scheduling. The initial check-out process of the PWE successfully completed, and initial data has been obtained. In this presentation, we introduce onboard processing technique on PWE OFA/WFC and its initial results.

Sand consolidation

Energy Technology Data Exchange (ETDEWEB)

Spain, H H

1965-01-21

In a sand consolidation method in which there is injected a mixture of resin-forming liquids comprising an aryl-hydroxy low molecular weight compound, a water- soluble aldehyde, and a catalyst, an improvement is claimed which comprises diluting the resin-forming liquids with a diluent and with water so that the yield of the resin is sufficient to consolidate the sand particles with the minimum desirable pressure. The diluent may be mutually soluble in water and in the resin-forming liquids, and does not affect the setting time of the polymer. The aldehyde and the aryl-hydroxy compound may be in ratio of 5:1, and the diluent, methyl alcohol, is present in a ratio of 2:1 with reference to the water.

Paleoenvironments of the Jurassic and Cretaceous Oceans: Selected Highlights

Science.gov (United States)

Ogg, J. G.

2007-12-01

There are many themes contributing to the sedimentation history of the Mesozoic oceans. This overview briefly examines the roles of the carbonate compensation depth (CCD) and the associated levels of atmospheric carbon dioxide, of the evolution of marine calcareous microplankton, of major transgressive and regressive trends, and of super-plume eruptions. Initiation of Atlantic seafloor spreading in the Middle Jurassic coincided with an elevated carbonate compensation depth (CCD) in the Pacific-Tethys mega-ocean. Organic-rich sediments that would become the oil wealth of regions from Saudi Arabia to the North Sea were deposited during a continued rise in CCD during the Oxfordian-early Kimmeridgian, which suggests a possible increase in carbon dioxide release by oceanic volcanic activity. Deep-sea deposits in near-equatorial settings are dominated by siliceous shales or cherts, which reflect the productivity of siliceous microfossils in the tropical surface waters. The end-Jurassic explosion in productivity by calcareous microplankton contributed to the lowering of the CCD and onset of the chalk ("creta") deposits that characterize the Tithonian and lower Cretaceous in all ocean basins. During the mid-Cretaceous, the eruption of enormous Pacific igneous provinces (Ontong Java Plateau and coeval edifices) increased carbon dioxide levels. The resulting rise in CCD terminated chalk deposition in the deep sea. The excess carbon was progressively removed in widespread black-shale deposits in the Atlantic basins and other regions - another major episode of oil source rock. A major long-term transgression during middle and late Cretaceous was accompanied by extensive chalk deposition on continental shelves and seaways while the oceanic CCD remained elevated. Pacific guyots document major oscillations (sequences) of global sea level superimposed on this broad highstand. The Cretaceous closed with a progressive sea-level regression and lowering of the CCD that again enabled

Sands at Gusev Crater, Mars

Science.gov (United States)

Cabrol, Nathalie A.; Herkenhoff, Kenneth E.; Knoll, Andrew H.; Farmer, Jack D.; Arvidson, Raymond E.; Grin, E.A.; Li, Ron; Fenton, Lori; Cohen, B.; Bell, J.F.; Yingst, R. Aileen

2014-01-01

Processes, environments, and the energy associated with the transport and deposition of sand at Gusev Crater are characterized at the microscopic scale through the comparison of statistical moments for particle size and shape distributions. Bivariate and factor analyses define distinct textural groups at 51 sites along the traverse completed by the Spirit rover as it crossed the plains and went into the Columbia Hills. Fine-to-medium sand is ubiquitous in ripples and wind drifts. Most distributions show excess fine material, consistent with a predominance of wind erosion over the last 3.8 billion years. Negative skewness at West Valley is explained by the removal of fine sand during active erosion, or alternatively, by excess accumulation of coarse sand from a local source. The coarse to very coarse sand particles of ripple armors in the basaltic plains have a unique combination of size and shape. Their distribution display significant changes in their statistical moments within the ~400 m that separate the Columbia Memorial Station from Bonneville Crater. Results are consistent with aeolian and/or impact deposition, while the elongated and rounded shape of the grains forming the ripples, as well as their direction of origin, could point to Ma'adim Vallis as a possible source. For smaller particles on the traverse, our findings confirm that aeolian processes have dominated over impact and other processes to produce sands with the observed size and shape patterns across a spectrum of geologic (e.g., ripples and plains soils) and aerographic settings (e.g., wind shadows).

Broad-scale patterns of late jurassic dinosaur paleoecology.

Science.gov (United States)

Noto, Christopher R; Grossman, Ari

2010-09-03

There have been numerous studies on dinosaur biogeographic distribution patterns. However, these distribution data have not yet been applied to ecological questions. Ecological studies of dinosaurs have tended to focus on reconstructing individual taxa, usually through comparisons to modern analogs. Fewer studies have sought to determine if the ecological structure of fossil assemblages is preserved and, if so, how dinosaur communities varied. Climate is a major component driving differences between communities. If the ecological structure of a fossil locality is preserved, we expect that dinosaur assemblages from similar environments will share a similar ecological structure. This study applies Ecological Structure Analysis (ESA) to a dataset of 100+ dinosaur taxa arranged into twelve composite fossil assemblages from around the world. Each assemblage was assigned a climate zone (biome) based on its location. Dinosaur taxa were placed into ecomorphological categories. The proportion of each category creates an ecological profile for the assemblage, which were compared using cluster and principal components analyses. Assemblages grouped according to biome, with most coming from arid or semi-arid/seasonal climates. Differences between assemblages are tied to the proportion of large high-browsing vs. small ground-foraging herbivores, which separates arid from semi-arid and moister environments, respectively. However, the effects of historical, taphonomic, and other environmental factors are still evident. This study is the first to show that the general ecological structure of Late Jurassic dinosaur assemblages is preserved at large scales and can be assessed quantitatively. Despite a broad similarity of climatic conditions, a degree of ecological variation is observed between assemblages, from arid to moist. Taxonomic differences between Asia and the other regions demonstrate at least one case of ecosystem convergence. The proportion of different ecomorphs, which

Adaptations for marine habitat and the effect of Triassic and Jurassic predator pressure on development of decompression syndrome in ichthyosaurs

Science.gov (United States)

Rothschild, B. M.; Xiaoting, Z.; Martin, L. D.

2012-06-01

Decompression syndrome (caisson disease or the "the bends") resulting in avascular necrosis has been documented in mosasaurs, sauropterygians, ichthyosaurs, and turtles from the Middle Jurassic to Late Cretaceous, but it was unclear that this disease occurred as far back as the Triassic. We have examined a large Triassic sample of ichthyosaurs and compared it with an equally large post-Triassic sample. Avascular necrosis was observed in over 15 % of Late Middle Jurassic to Cretaceous ichthyosaurs with the highest occurrence (18 %) in the Early Cretaceous, but was rare or absent in geologically older specimens. Triassic reptiles that dive were either physiologically protected, or rapid changes of their position in the water column rare and insignificant enough to prevent being recorded in the skeleton. Emergency surfacing due to a threat from an underwater predator may be the most important cause of avascular necrosis for air-breathing divers, with relative frequency of such events documented in the skeleton. Diving in the Triassic appears to have been a "leisurely" behavior until the evolution of large predators in the Late Jurassic that forced sudden depth alterations contributed to a higher occurrence of bends.

In silico analysis of conformational changes induced by mutation of aromatic binding residues: consequences for drug binding in the hERG K+ channel.

Directory of Open Access Journals (Sweden)

Kirsten Knape

Full Text Available Pharmacological inhibition of cardiac hERG K(+ channels is associated with increased risk of lethal arrhythmias. Many drugs reduce hERG current by directly binding to the channel, thereby blocking ion conduction. Mutation of two aromatic residues (F656 and Y652 substantially decreases the potency of numerous structurally diverse compounds. Nevertheless, some drugs are only weakly affected by mutation Y652A. In this study we utilize molecular dynamics simulations and docking studies to analyze the different effects of mutation Y652A on a selected number of hERG blockers. MD simulations reveal conformational changes in the binding site induced by mutation Y652A. Loss of π-π-stacking between the two aromatic residues induces a conformational change of the F656 side chain from a cavity facing to cavity lining orientation. Docking studies and MD simulations qualitatively reproduce the diverse experimentally observed modulatory effects of mutation Y652A and provide a new structural interpretation for the sensitivity differences.

Direct Chlorination of Zircon Sand

International Nuclear Information System (INIS)

Dwiretnani Sudjoko; Budi Sulistyo; Pristi Hartati; Sunardjo

2002-01-01

It was investigated the direct chlorination of zircon sand in a unit chlorination equipment. The process was in semi batch. The product gas was scrubbed in aqueous NaOH. It was search the influence of time, ratio of reactant and size of particle sand to the concentration of Zr and Si in the product. From these research it was found that as the times, ratio of reactant increased, the concentration of Zr increased, but the concentration of Si decreased, while as grain size of zircon sand decreased the concentration of Zr decreased, but the concentration of Si increased. (author)

Multi-Method Provenance Analysis of Namibian Desert Sand

Science.gov (United States)

Vermeesch, P.; Garzanti, E.

2014-12-01

Mineralogical, geochemical and geochronological provenance proxies each have their own strengths and weaknesses: a. Bulk geochemistry, framework petrography and heavy mineral compositions can differentiate between source areas characterised by different lithologies, but are sensitive to hydraulic sorting and chemical alteration. b. Detrital zircon U-Pb geochronology is insensitive to winnowing effects, but is 'blind' to lithologies devoid of zircon and cannot differentiate between first cycle and recycled sediments. c. Cosmogenic neon isotopes can be used to identify different generations of surface exposure while simultaneously tracking different magmatic sources. The challenge is then to combine these different proxies into a self consistent story, and do so in as objective a manner as possible. We here present a case study of Namibia's Namib Sand Sea and Skeleton Coast ergs, in which all the aforementioned methods have been combined using a three-way multidimensional scaling (aka INDividual Differences SCALing or INDSCAL) analysis: 1. Each of the datasets was represented by a 'dissimilarity matrix' of pairwise distances between samples. 2. The set of these matrices was fed into the INDSCAL algorithm, which produces two pieces of graphical output: the 'group configuration', which is a scatter plot or 'map' in which similar samples plot close together and dissimilar samples plot far apart, and the 'proxy weights', in which not the samples but the proxies are plotted according to the weight they attached to the 'group configuration' axes. The INDSCAL map of the Namibia dataset indicates that (a) long-shore drift of Orange River sediments dominates the coastal sediment compositions all along the Namibian coast until Angola, and (b) that light and heavy minerals tell complementary parts of the provenance story.

A new upper jurassic ophthalmosaurid ichthyosaur from the Slottsmøya Member, Agardhfjellet formation of central Spitsbergen.

Directory of Open Access Journals (Sweden)

Aubrey Jane Roberts

Full Text Available Abundant new ichthyosaur material has recently been documented in the Slottsmøya Member of the Agardhfjellet Formation from the Svalbard archipelago of Norway. Here we describe a partial skeleton of a new taxon, Janusaurus lundi, that includes much of the skull and representative portions of the postcranium. The new taxon is diagnosed by a suite of cranial character states including a very gracile stapedial shaft, the presence of a dorsal process on the prearticular and autapomorphic postcranial features such as the presence of an interclavicular trough and a conspicuous anterodorsal process of the ilium. The peculiar morphology of the ilia indicates a previously unrecognized degree of morphological variation in the pelvic girdle of ophthalmosaurids. We also present a large species level phylogenetic analysis of ophthalmosaurids including new and undescribed ichthyosaur material from the Upper Jurassic of Svalbard. Our results recover all Svalbard taxa in a single unresolved polytomy nested within Ophthalmosaurinae, which considerably increases the taxonomic composition of this clade. The paleobiogeographical implications of this result suggest the presence of a single clade of Boreal ophthalmosaurid ichthyosaurs that existed during the latest Jurassic, a pattern also reflected in the high degree of endemicity among some Boreal invertebrates, particularly ammonoids. Recent and ongoing descriptions of marine reptiles from the Slottsmøya Member Lagerstätte provide important new data to test hypotheses of marine amniote faunal turnover at the Jurassic-Cretaceous boundary.

The conchostracan subgenus Orthestheria (Migransia) from the Tacuarembó Formation (Late Jurassic-?Early Cretaceous, Uruguay) with notes on its geological age

Science.gov (United States)

Yanbin, Shen; Gallego, Oscar F.; Martínez, Sergio

2004-04-01

Conchostracans from the Tacuarembó Formation s.s. of Uruguay are reassigned to the subgenus Orthestheria (Migransia) Chen and Shen. They show more similarities to genera of Late Jurassic age in the Congo Basin and China than to those of Early Cretaceous age. On the basis of the character of the conchostracans, we suggest that the Tacuarembó Formation is unlikely to be older than Late Jurassic. It is probably Kimmeridgian, but an Early Cretaceous age cannot be excluded. This finding is consistent with isotopic dating of the overlying basalts, as well as the age range of recently described fossil freshwater sharks.

Lacustrine basin evolution and coal accumulation of the Middle Jurassic in the Saishiteng coalfield, northern Qaidam Basin, China

Directory of Open Access Journals (Sweden)

Meng Li

2016-07-01

Full Text Available Based on an extensive borehole survey of the Middle Jurassic coal-bearing sequences in the Saishiteng coalfield, northern Qaidam Basin (NQB, a total of 20 rock types and 5 sedimentary facies were identified, including braided river, meandering river, braided delta, meandering river delta, and lacustrine facies. The distribution of rock types and sedimentary facies contributed to the reconstruction of three periods' sedimentary facies maps of the Middle Jurassic in the Saishiteng coalfield, namely, the Dameigou age, the early Shimengou age and the late Shimengou age. That also provided the basis for the development of a three-stage depositional model of the Middle Jurassic in the NQB, indicating the lacustrine basin of the NQB in the Dameigou age and early Shimengou age were corresponding to an overfill basin, and that in the late Shimengou age was related to a balanced-fill basin. The analysis of the stability and structure of coal seams based on sedimentary facies maps showed that the preferred coal-forming facies in the Saishiteng coalfield were inter-delta bay and interdistributary bay of lower delta plain in the Dameigou age. In particular, the swamps that developed on the subaqueous palaeohigh favored the development of thick coal seams. Thus, minable coal seams may also be found along the Pingtai palaeohigh in the western part of the Saishiteng coalfield.

Thermal Conductivity of Polymer Composite poypropilene-Sand

International Nuclear Information System (INIS)

Betha; Mashuri; Sudirman; Karo Karo, Aloma

2001-01-01

Thermal conductivity composite materials polypropylene (PP)-sand have been investigated. PP composite with sand to increase thermal conductivity from the polymer. The composite in this observation is done by mixing matrix (PP melt flow 2/10)and filler sand)by means tool labo plastomil. The result of thermal conductivity is composite of PP-sand which is obtained increase and followed by the raising of filler particle volume fraction. The analysis of thermal conductivity based on the model Cheng and Vachon, model Lewis and Nielsen where this model has the function to support experiment finding. It is proved that Lewis' and Nielsen's model almost approach experiment result. And then thermal conductivity raising will be analyzed by the model of pararel-series conductive with the two (2)phases system. It is showed that sand in PP MF 2 composite have the big role to increase the thermal conductivity than sand in PP MF 10 composition, but it is not easy to shape conductive medium

Final report on Thermally Modified Sand demonstration project

Energy Technology Data Exchange (ETDEWEB)

1994-09-23

The use of salt and salt/sand mixtures on icy roadway surfaces has dramatically increased during the past 30 years. Despite extensive documentation on salt related damage to the roadway improvements, vehicles and the environment, road maintenance departments have continued to rely on this practice. Road maintenance departments in northern climate areas have long recognized the safety benefits for public mobility on icy roadways from the use of sand. As an abrasive material, the sand improves the surface traction that results in more drivable and less hazardous road conditions during the winter months. Stockpiles of pure sand stored during the winter months oftentimes freeze into large unworkable, monolithic piles. To maintain a free-flowing condition, it has been found to be necessary to add salt to the sand. The addition of salt in amounts ranging from 5 to 10 percent to that of sand, is usually sufficient to provide relatively free-flowing abrasive material that could be stored in stockpiles and applied to icy road surfaces with conventional sand spreading trucks. Another alternative for winter storage of pure sand to maintain a free-flowing condition is in humidity-controlled, heated buildings. As would be expected, this method has high capital and operating costs. and not cost effective for general highway maintenance use. The invention demonstrated herein is a method of thermally modifying pure sand that will remain in a free-flowing state throughout the winter season without the need for the salt additive. The thermally modified sand provides an abrasive material that when applied to icy roads does not cause environmental and corrosive damage as done by the application of sand with salt. By employing a very simple process of freezing screened sand particles by forced air convection under subfreezing conditions, the invention creates a product that has significant value in terms of economic and environmental benefits.

Evaluate of head loss, sediment value and copper removal in sand media (rapid sand filter

Directory of Open Access Journals (Sweden)

Daneshi Navab

2014-06-01

Full Text Available Along with the technology development and increasing consumption of water resources, we are experiencing low qualities in the mentioned resources. Copper brings about serious environment al pollution, threatening human health and ecosystem. This metal found variously in water resources and industrial activities. Therefore, it needs to treat the water resources from these excessive amounts. Different methods have used for this reason but the most used method during recent years has been the absorption by economic absorbers such as sand. Rapid sand filters usually used in water and wastewater treatment plants for water clarification. In this research, a single layer gravity rapid sand filter has used to reduce different concentrations of copper. sediment value and head loss arising in filter media is simulated by using combination of Carman-Kozeny, Rose and Gregory models in different discharges of rapid sand filter. Results have shown that with increasing in discharge and decreasing in input copper concentration, arriving time to given head loss, is increasing. In addition, results demonstrated that with increasing in copper concentration in influent, removal efficiency is decreasing somewhat. Results of this research can applied in an appropriate design of rapid sand filter to copper removal, a prediction of rapid sand filter ability to copper removal and an estimation of arising head loss during filter work thus evaluating of time interval backwash. DOI: http://dx.doi.org/10.3126/ije.v3i2.10641 International Journal of the Environment Vol.3(2 2014: 276-286

In situ recovery of oil from Utah tar sand: a summary of tar sand research at the Laramie Energy Technology Center

Energy Technology Data Exchange (ETDEWEB)

Marchant, L.C.; Westhoff, J.D.

1985-10-01

This report describes work done by the United States Department of Energy's Laramie Energy Technology Center from 1971 through 1982 to develop technology for future recovery of oil from US tar sands. Work was concentrated on major US tar sand deposits that are found in Utah. Major objectives of the program were as follows: determine the feasibility of in situ recovery methods applied to tar sand deposits; and establish a system for classifying tar sand deposits relative to those characteristics that would affect the design and operation of various in situ recovery processes. Contents of this report include: (1) characterization of Utah tar sand; (2) laboratory extraction studies relative to Utah tar sand in situ methods; (3) geological site evaluation; (4) environmental assessments and water availability; (5) reverse combustion field experiment, TS-1C; (6) a reverse combustion followed by forward combustion field experiment, TS-2C; (7) tar sand permeability enhancement studies; (8) two-well steam injection experiment; (9) in situ steam-flood experiment, TS-1S; (10) design of a tar sand field experiment for air-stream co-injection, TS-4; (11) wastewater treatment and oil analyses; (12) economic evaluation of an in situ tar sand recovery process; and (13) appendix I (extraction studies involving Utah tar sands, surface methods). 70 figs., 68 tabs.

Study on sand particles creep model and open pit mine landslide mechanism caused by sand fatigue liquefaction

Science.gov (United States)

Du, Dong-Ning; Wang, Lai-Gui; Zhang, Xiang-Dong; Zhang, Shu-Kun

2017-06-01

The sand particles in the sand - rock composite slope of the open pit mine occurs creep deformation and fatigue liquefaction under the action of vehicle load vibration and hydraulic gradient, which causes landslide geological disasters and it destroys the surface environment. To reveal the mechanism, a mechanics model based on the model considering the soil structural change with a new “plastic hinge” element is developed, to improve its constitutive and creep curve equations. Data from sand creep experiments are used to identify the parameters in the model and to validate the model. The results show that the mechanical model can describe the rotation progress between the sand particles, disclose the negative acceleration creep deformation stage during the third phase, and require fewer parameters while maintaining accuracy. It provides a new creep model considering rotation to analyze sand creep mechanism, which provides a theoretical basis for revealing the open pit mine landslide mechanism induced by creep deformation and fatigue liquefaction of sandy soil.

Retorting of bituminous sands

Energy Technology Data Exchange (ETDEWEB)

Chaney, P E; Ince, R W; Mason, C M

1872-09-26

This method of recovering oil from mined tar sands involves forming compacted tar sands pieces by special conditioning treatment that provides low internal permeability. The compacted pieces are then retorted in fixed bed form. The conditioning treatment can involve rolling of preformed pellets, compaction in a mold or pressure extrusion. Substantial collapsing of the bed during retorting is avoided. (9 claims) (Abstract only - original article not available from T.U.)

Rapid detection of ERG11 gene mutations in clinical Candida albicans isolates with reduced susceptibility to fluconazole by rolling circle amplification and DNA sequencing

OpenAIRE

Wang, Huiping; Kong, Fanrong; Sorrell, Tania C; Wang, Bin; McNicholas, Paul; Pantarat, Namfon; Ellis, David; Xiao, Meng; Widmer, Fred; Chen, Sharon CA

2009-01-01

Abstract Background Amino acid substitutions in the target enzyme Erg11p of azole antifungals contribute to clinically-relevant azole resistance in Candida albicans. A simple molecular method for rapid detection of ERG11 gene mutations would be an advantage as a screening tool to identify potentially-resistant strains and to track their movement. To complement DNA sequencing, we developed a padlock probe and rolling circle amplification (RCA)-based method to detect a series of mutations in th...

Analysis of the ergosterol biosynthesis pathway cloning, molecular characterization and phylogeny of lanosterol 14α-demethylase (ERG11 gene of Moniliophthora perniciosa

Directory of Open Access Journals (Sweden)

Geruza de Oliveira Ceita

2014-12-01

Full Text Available The phytopathogenic fungus Moniliophthora perniciosa (Stahel Aime & Philips-Mora, causal agent of witches' broom disease of cocoa, causes countless damage to cocoa production in Brazil. Molecular studies have attempted to identify genes that play important roles in fungal survival and virulence. In this study, sequences deposited in the M. perniciosa Genome Sequencing Project database were analyzed to identify potential biological targets. For the first time, the ergosterol biosynthetic pathway in M. perniciosa was studied and the lanosterol 14α-demethylase gene (ERG11 that encodes the main enzyme of this pathway and is a target for fungicides was cloned, characterized molecularly and its phylogeny analyzed. ERG11 genomic DNA and cDNA were characterized and sequence analysis of the ERG11 protein identified highly conserved domains typical of this enzyme, such as SRS1, SRS4, EXXR and the heme-binding region (HBR. Comparison of the protein sequences and phylogenetic analysis revealed that the M. perniciosa enzyme was most closely related to that of Coprinopsis cinerea.

Use of sand wave habitats by silver hake

Science.gov (United States)

Auster, P.J.; Lindholm, J.; Schaub, S.; Funnell, G.; Kaufman, L.S.; Valentine, P.C.

2003-01-01

Silver hake Merluccius bilinearis are common members of fish communities in sand wave habitats on Georges Bank and on Stellwagen Bank in the Gulf of Maine. Observations of fish size v. sand wave period showed that silver hake are not randomly distributed within sand wave landscapes. Regression analyses showed a significant positive relationship between sand wave period and fish length. Correlation coefficients, however, were low, suggesting other interactions with sand wave morphology, the range of current velocities, and available prey may also influence their distribution. Direct contact with sand wave habitats varied over diel periods, with more fish resting on the seafloor during daytime than at night. Social foraging, in the form of polarized groups of fish swimming in linear formations during crepuscular and daytime periods, was also observed. Sand wave habitats may provide shelter from current flows and mediate fish-prey interactions. ?? 2003 The Fisheries Society of the British Isles.

An NMR investigation of the structure, function and role of the hERG channel selectivity filter in the long QT syndrome.

Science.gov (United States)

Gravel, Andrée E; Arnold, Alexandre A; Dufourc, Erick J; Marcotte, Isabelle

2013-06-01

The human ether-a-go-go-related gene (hERG) voltage-gated K(+) channels are located in heart cell membranes and hold a unique selectivity filter (SF) amino acid sequence (SVGFG) as compared to other K(+) channels (TVGYG). The hERG provokes the acquired long QT syndrome (ALQTS) when blocked, as a side effect of drugs, leading to arrhythmia or heart failure. Its pore domain - including the SF - is believed to be a cardiotoxic drug target. In this study combining solution and solid-state NMR experiments we examine the structure and function of hERG's L(622)-K(638) segment which comprises the SF, as well as its role in the ALQTS using reported active drugs. We first show that the SF segment is unstructured in solution with and without K(+) ions in its surroundings, consistent with the expected flexibility required for the change between the different channel conductive states predicted by computational studies. We also show that the SF segment has the potential to perturb the membrane, but that the presence of K(+) ions cancels this interaction. The SF moiety appears to be a possible target for promethazine in the ALQTS mechanism, but not as much for bepridil, cetirizine, diphenhydramine and fluvoxamine. The membrane affinity of the SF is also affected by the presence of drugs which also perturb model DMPC-based membranes. These results thus suggest that the membrane could play a role in the ALQTS by promoting the access to transmembrane or intracellular targets on the hERG channel, or perturbing the lipid-protein synergy. Copyright © 2013 Elsevier B.V. All rights reserved.

Tidal dynamics in the sand motor lagoon

NARCIS (Netherlands)

De Vries, S.; Radermacher, M.; De Schipper, M.A.; Stive, M.J.F.

2015-01-01

The Sand Motor is a mega-nourishment characterized by a very large sand volume of around 20 million m3 placed along the Dutch coast. The Sand Motor is a pilot project to evaluate the performance of an alternative nourishment strategy with respect to different functions of the coastal system. Within

PASS Reference Set Application: Lin UW (2010) TMPRSS2-ERG-PCA-PASS — EDRN Public Portal

Science.gov (United States)

Active surveillance is used to manage low-risk prostate cancer. Both PCA3 and TMPRSS2:ERG are promising biomarkers that may be associated with aggressive disease. This study examines the correlation of these biomarkers with higher cancer volume and grade determined at the time of biopsy in an active surveillance cohort.

Numerical simulation of flow and compression of green sand

DEFF Research Database (Denmark)

Hovad, Emil

The focus of the industrial PhD project was concentrated on the production of the sand mold (green sand) which gives the cast component its final geometrical shape. In order to ensure a high quality of the cast component, it is important to control the manufacturing process of the mold itself so...... that it is homogeneous and stable. Therefore gaining a basic understanding of how the flow and deposition of green sand should be characterized and modelled was important, so that it could be used for simulation of the manufacturing process of the sand mold. The flowability of the green sand is important when the sand...... flows down through the hopper filling the chamber with sand during the sand shot. The flowability of green sand is mostly governed by the amount of water and bentonite which both decrease it. The flowability and the internal forces thus control how well you can fill a complex mold geom-etry in which...

Sand wave fields beneath the Loop Current, Gulf of Mexico: Reworking of fan sands

Science.gov (United States)

Kenyon, Neil H.; Akhmetzhanov, A.M.; Twichell, D.C.

2002-01-01

Extensive fields of large barchan-like sand waves and longitudinal sand ribbons have been mapped by deep-towed SeaMARC IA sidescan sonar on part of the middle and lower Mississippi Fan that lies in about 3200 m of water. The area is beneath the strongly flowing Loop Current. The bedforms have not been adequately sampled but probably consist of winnowed siliciclastic-foraminiferal sands. The size (about 200 m from wingtip to wingtip) and shape of the large barchans is consistent with a previously observed peak current speed of 30 cm/s, measured 25 m above the seabed. The types of small-scale bedforms and the scoured surfaces of chemical crusts, seen on nearby bottom photographs, indicate that near-bed currents in excess of 30 cm/s may sometimes occur. At the time of the survey the sand transport direction was to the northwest, in the opposite direction to the Loop Current but consistent with there being a deep boundary current along the foot of the Florida Escarpment. Some reworking of the underlying sandy turbidites and debris flow deposits is apparent on the sidescan sonar records. Reworking by deep-sea currents, resulting in erosion and in deposits characterised by coarsening upwards structures and cross-bedding, is a process that has been proposed for sand found in cores in shallower parts of the Gulf of Mexico. This process is more widespread than hitherto supposed. 

Oil sands and the environment

Energy Technology Data Exchange (ETDEWEB)

Seeley, R. [Shell Canada Ltd., Calgary, AB (Canada). Calgary Research Centre

2004-07-01

Oil sands are a significant resource for Alberta and Canada with continuing growth opportunity. There is a need to ensure sustainable development of the oil sands resources from a social, economic and environmental perspective. The industry has succeeded in terms of proven reserves, technology advancements, reduced operating costs, reliability and market accessibility. Some of the major challenges facing the industry include high capital cost, infrastructure, social services and keeping pace with growth. This presentation outlined the proactive measures that the oil sands industry has taken to manage environmental issues such as sulphur dioxide and nitrogen oxide emissions, greenhouse gases, water management and land reclamation. tabs., figs.

Alberta oil sands royalty regime

International Nuclear Information System (INIS)

Asgarpour, S.

2004-01-01

The long term objective of the Oil Sands Business Unit of Alberta Energy is to pave the way for Alberta's bitumen production to reach 3 million barrels per day by 2020. This presentation described the national government's role in resource development. It was emphasized that since the Crown is the owner of the oil sands resource, it would benefit by providing strategic leadership and by generating a larger royalty base. The oil sands fiscal regime was described with reference to generic royalty, risk sharing, investment, and project economics. Business rule principles were also outlined along with criteria for project expansions. Both upstream and downstream challenges and opportunities were listed. 4 figs

Experimental study of optimal self compacting concrete with spent foundry sand as partial replacement for M-sand using Taguchi approach

Directory of Open Access Journals (Sweden)

Nirmala D.B.

2016-06-01

Full Text Available This paper presents the application of Taguchi approach to obtain optimal mix proportion for Self Compacting Concrete (SCC containing spent foundry sand and M-sand. Spent foundry sand is used as a partial replacement for M-sand. The SCC mix has seven control factors namely, Coarse aggregate, M-sand with Spent Foundry sand, Cement, Fly ash, Water, Super plasticizer and Viscosity modifying agent. Modified Nan Su method is used to proportion the initial SCC mix. L18 (21×37 Orthogonal Arrays (OA with the seven control factors having 3 levels is used in Taguchi approach which resulted in 18 SCC mix proportions. All mixtures are extensively tested both in fresh and hardened states to verify whether they meet the practical and technical requirements of SCC. The quality characteristics considering “Nominal the better” situation is applied to the test results to arrive at the optimal SCC mix proportion. Test results indicate that the optimal mix satisfies the requirements of fresh and hardened properties of SCC. The study reveals the feasibility of using spent foundry sand as a partial replacement of M-sand in SCC and also that Taguchi method is a reliable tool to arrive at optimal mix proportion of SCC.

Experimental study of optimal self compacting concrete with spent foundry sand as partial replacement for M-sand using Taguchi approach

Science.gov (United States)

Nirmala, D. B.; Raviraj, S.

2016-06-01

This paper presents the application of Taguchi approach to obtain optimal mix proportion for Self Compacting Concrete (SCC) containing spent foundry sand and M-sand. Spent foundry sand is used as a partial replacement for M-sand. The SCC mix has seven control factors namely, Coarse aggregate, M-sand with Spent Foundry sand, Cement, Fly ash, Water, Super plasticizer and Viscosity modifying agent. Modified Nan Su method is used to proportion the initial SCC mix. L18 (21×37) Orthogonal Arrays (OA) with the seven control factors having 3 levels is used in Taguchi approach which resulted in 18 SCC mix proportions. All mixtures are extensively tested both in fresh and hardened states to verify whether they meet the practical and technical requirements of SCC. The quality characteristics considering "Nominal the better" situation is applied to the test results to arrive at the optimal SCC mix proportion. Test results indicate that the optimal mix satisfies the requirements of fresh and hardened properties of SCC. The study reveals the feasibility of using spent foundry sand as a partial replacement of M-sand in SCC and also that Taguchi method is a reliable tool to arrive at optimal mix proportion of SCC.

The last frontier? High-resolution, near-bottom measurements of the Hawaiian Jurassic magnetic anomaly sequence

Science.gov (United States)

Tivey, M.; Tominaga, M.; Sager, W. W.

2012-12-01

The Jurassic sequence of marine magnetic anomalies i.e. older than M29 remain the last part of the marine magnetic anomaly sequence of the geomagnetic polarity timescale (GPTS) that can be gleaned from the ocean crustal record. While Jurassic crust is present in several areas of the world's ocean basins, the oldest and arguably best preserved sequence is in the western Pacific where three lineations sets (Japanese, Hawaiian and Phoenix) converge on the oldest remaining ocean crust on the planet (i.e. crust that has not been subducted). The magnetic anomalies in these 3 lineation sets are marked by low amplitude, relatively indistinct anomalies (tiny wiggles) that collectively have been called the Jurassic quiet Zone (JQZ). Over the past 20 years we have been working on resolving the character and origin of these anomalies with various technologies to improve our resolution of this period. Following an aeromagnetic survey that revealed the possible presence of lineated anomalies older than M29 in the Japanese lineations, we conducted a deeptow magnetometer survey of the Japanese sequence in 1992. In 2002/03 we extended and confirmed this deeptow record with a deeptowed sidescan and magnetometer survey of the Japanese lineation sequence by tying in ODP Hole 801C and extending the anomaly sequence between M29 and M44. These surveys reveal remarkably fast reversals that are lineated and decrease in intensity back in time until M38, prior to which the sequence becomes somewhat confused (the LAZ or low amplitude zone) before recovering in both amplitude and lineated character around Hole 801C (M42). These results are partially supported by recently reported terrestrial magnetostratigraphy records that show the existence of reversals back to M38. A Jurassic GPTS was constructed from this Japanese anomaly sequence, but the overall global significance of the reversal sequence and systematic field intensity changes require confirmation from crustal records created at

Carbon cycle history through the Middle Jurassic (Aalenian - Bathonian) of the Mecsek Mountains, Southern Hungary

Science.gov (United States)

Price, Gregory D.; Főzy, István; Galácz, András

2018-04-01

A carbonate carbon isotope curve from the Aalenian-Bathonian interval is presented from the Óbánya valley, of the Mecsek Mountains, Hungary. This interval is certainly less well constrained and studied than other Jurassic time slices. The Óbánya valley lies in the eastern part of the Mecsek Mountains, between Óbánya and Kisújbánya and provides exposures of an Aalenian to Lower Cretaceous sequence. It is not strongly affected by tectonics, as compared to other sections of eastern Mecsek of the same age. In parts, a rich fossil assemblage has been collected, with Bathonian ammonites being especially valuable at this locality. The pelagic Middle Jurassic is represented by the Komló Calcareous Marl Formation and thin-bedded limestones of the Óbánya Limestone Formation. These are overlain by Upper Jurassic siliceous limestones and radiolarites of the Fonyászó Limestone Formation. Our new data indicate a series of carbon isotope anomalies within the late Aalenian and early-middle Bajocian. In particular, analysis of the Komló Calcareous Marl Formation reveals a negative carbon isotope excursion followed by positive values that occurs near the base of the section (across the Aalenian-Bajocian boundary). The origin of this carbon-isotope anomaly is interpreted to lie in significant changes to carbon fluxes potentially stemming from reduced run off, lowering the fertility of surface waters which in turn leads to lessened primary production and a negative δ13C shift. These data are comparable with carbonate carbon isotope records from other Tethyan margin sediments. Our integrated biostratigraphy and carbon isotope stratigraphy enable us to improve stratigraphic correlation and age determination of the examined strata. Therefore, this study of the Komló Calcareous Marl Formation confirms that the existing carbon isotope curves serve as a global standard for Aalenian-Bathonian δ13C variation.

Tellurium Enrichment in Jurassic Coal, Brora, Scotland

Directory of Open Access Journals (Sweden)

Liam Bullock

2017-11-01

Full Text Available Mid-Jurassic pyritic coals exposed at the village of Brora, northern Scotland, UK, contain a marked enrichment of tellurium (Te relative to crustal mean, average world coal compositions and British Isles Carboniferous coals. The Te content of Brora coal pyrite is more than one order of magnitude higher than in sampled pyrite of Carboniferous coals. The Te enrichment coincides with selenium (Se and mercury (Hg enrichment in the rims of pyrite, and Se/Te is much lower than in pyrites of Carboniferous coals. Initial pyrite formation is attributed to early burial (syn-diagenesis, with incorporation of Te, Se, Hg and lead (Pb during later pyrite formation. The source of Te may have been a local hydrothermal system which was responsible for alluvial gold (Au in the region, with some Au in Brora headwaters occurring as tellurides. Anomalous Te is not ubiquitous in coal, but may occur locally, and is detectable by laser ablation inductively coupled plasma-mass spectrometry (LA-ICP-MS.

Oil sands tailings management project

Energy Technology Data Exchange (ETDEWEB)

Godwalt, C. [Alberta WaterSMART, Calgary, AB (Canada); Kotecha, P. [Suncor Energy Inc, Calgary, AB (Canada); Aumann, C. [Alberta Innovates - Technology Futures, Alberta Governement, AB (Canada)

2010-11-15

The Oil sands leadership initiative (OSLI) works with the Government of Alberta on the development of the oil sands industry, considering environmental, economical and social aspects. Water management was identified as one of most important areas to focus on. Alberta WaterSMART was requested to support the development and the management of projects resulting from the work done or underway in this field. The development of a regional water management solution stood out as the most interesting solution to obtain significant results. In the Athabasca Region, oil sands producers work independently on their water sourcing and disposal with particular attention to fresh water conservation and economics. The Athabasca River represents a source for mines and distant saline aquifers are the target of steam assisted gravity drainage (SAGD) operators. As part of a four-phase project aiming to study the environmental and economic footprint (EEF) benefit of alternatives for Athabasca oil sands production water supply and disposal, the purpose of the tailings water management project was to identify tailings treatment technologies that are ready to be implemented, and to design and evaluate solutions in order to improve regional oil sands production water sourcing and disposal. Alternatives were evaluated based on their total EEF, applying a lifecycle assessment methodology with a particular attention on the quantification of important performance indicators. 25 refs., 8 tabs., 40 figs.

Oil sands tailings management project

International Nuclear Information System (INIS)

Godwalt, C.; Kotecha, P.; Aumann, C.

2010-11-01

The Oil sands leadership initiative (OSLI) works with the Government of Alberta on the development of the oil sands industry, considering environmental, economical and social aspects. Water management was identified as one of most important areas to focus on. Alberta WaterSMART was requested to support the development and the management of projects resulting from the work done or underway in this field. The development of a regional water management solution stood out as the most interesting solution to obtain significant results. In the Athabasca Region, oil sands producers work independently on their water sourcing and disposal with particular attention to fresh water conservation and economics. The Athabasca River represents a source for mines and distant saline aquifers are the target of steam assisted gravity drainage (SAGD) operators. As part of a four-phase project aiming to study the environmental and economic footprint (EEF) benefit of alternatives for Athabasca oil sands production water supply and disposal, the purpose of the tailings water management project was to identify tailings treatment technologies that are ready to be implemented, and to design and evaluate solutions in order to improve regional oil sands production water sourcing and disposal. Alternatives were evaluated based on their total EEF, applying a lifecycle assessment methodology with a particular attention on the quantification of important performance indicators. 25 refs., 8 tabs., 40 figs.

Invasive plants on disturbed Korean sand dunes

Science.gov (United States)

Kim, Kee Dae

2005-01-01

The sand dunes in coastal regions of South Korea are important ecosystems because of their small size, the rare species found in this habitat, and the beautiful landscapes they create. This study investigated the current vegetative status of sand dunes on three representative coasts of the Korean peninsula, and on the coasts of Cheju Island, and assessed the conditions caused by invasive plants. The relationships between the degree of invasion and 14 environmental variables were studied. Plots of sand dunes along line transects perpendicular to the coastal lines were established to estimate vegetative species coverage. TWINSPAN (Two-Way Indicator Species Analysis), CCA (Canonical Correspondence Analysis), and DCCA (Detrended Canonical Correspondence Analysis) were performed to classify communities on sand dunes and assess species composition variation. Carex kobomugi, Elymus mollis, and Vitex rotundifolia were found to be the dominant species plotted on the east, the west, and the peripheral coasts of Cheju Island, respectively. Vegetation on the south coast was totally extinct. The 19 communities, including representative C. kobomugi, C. kobomugi- Ixeris repens, C. kobomugi- Oenothera biennis, E. mollis, Lolium multiflorum- Calystegia soldanella, and V. rotundifolia- C. kobomugi, were all classified according to TWINSPAN. Oenothera biennis and L. multiflorum were exotics observed within these native communities. CCA showed that invasive native and exotic species distribution was segregated significantly, according to disturbance level, exotic species number, gravel, sand and silt contents, as well as vegetation size. It further revealed that human disturbance can strongly favor the settlement of invasive and exotic species. Restoration options to reduce exotic plants in the South Korean sand dune areas were found to be the introduction of native plant species from one sand dune into other sand dune areas, prohibition of building and the introduction of exotic

Characteristics of SCC with Fly Ash and Manufactured Sand

Science.gov (United States)

Praveen Kumar, K.; Radhakrishna

2016-09-01

Self compacting concrete (SCC) of M40 grade was designed. The binder in SCC consists of OPC and fly ash in the ratio of 65:35. River sand was replaced by manufactured sand (M-sand) at replacement levels of 20,40,60,80 and 100%. An attempt was made to evaluate the workability and strength characteristics of self compacting concrete with river sand and manufactured sand as fine aggregates. For each replacement level, constant workability was maintained by varying the dosage of superplasticizer. T50 flow time, V Funnel time, V-funnel T5 time as well as compressive, split tensile and flexural strength of SCC were found at each replacement level of M-sand. They were compared to SCC with river sand. Results indicate favourable use of M-sand in preparation of Self Compacting Concrete.

A Middle Jurassic abelisaurid from Patagonia and the early diversification of theropod dinosaurs.

Science.gov (United States)

Pol, Diego; Rauhut, Oliver W M

2012-08-22

Abelisaurids are a clade of large, bizarre predatory dinosaurs, most notable for their high, short skulls and extremely reduced forelimbs. They were common in Gondwana during the Cretaceous, but exceedingly rare in the Northern Hemisphere. The oldest definitive abelisaurids so far come from the late Early Cretaceous of South America and Africa, and the early evolutionary history of the clade is still poorly known. Here, we report a new abelisaurid from the Middle Jurassic of Patagonia, Eoabelisaurus mefi gen. et sp. nov., which predates the so far oldest known secure member of this lineage by more than 40 Myr. The almost complete skeleton reveals the earliest evolutionary stages of the distinctive features of abelisaurids, such as the modification of the forelimb, which started with a reduction of the distal elements. The find underlines the explosive radiation of theropod dinosaurs in the Middle Jurassic and indicates an unexpected diversity of ceratosaurs at that time. The apparent endemism of abelisauroids to southern Gondwana during Pangean times might be due to the presence of a large, central Gondwanan desert. This indicates that, apart from continent-scale geography, aspects such as regional geography and climate are important to reconstruct the biogeographical history of Mesozoic vertebrates.

The first fossil spider (Araneae: Palpimanoidea) from the Lower Jurassic (Grimmen, Germany).

Science.gov (United States)

Selden, Paul A; Dunlop, Jason A

2014-12-11

The first Lower Jurassic (Lias) spider is described as Seppo koponeni n. gen. & n. sp. from a single female specimen from Grimmen, Germany. It most likely belongs to the Palpimanoidea, on account of the presence of cheliceral peg teeth and other features consistent with palpimanoid families, though its familial placement is uncertain. Its presence in the region at that time concurs with ideas about the more widespread presence of palpimanoids across the world in the early Mesozoic, before the break-up of Pangaea.

Properties of dune sand concrete containing coffee waste

Directory of Open Access Journals (Sweden)

Mohamed Guendouz

2018-01-01

Full Text Available In the last years, an increase of coffee beverages consumption has been observed all over the world; and its consumption increases the waste coffee grounds which will become an environmental problems. Recycling of this waste to produce new materials like sand concrete appears as one of the best solutions for reduces the problem of pollution. This work aims to study the possibility of recycling waste coffee grounds (Spent Coffee Grounds (SCG as a fine aggregate by replacing the sand in the manufacturing of dune sand concrete. For this; sand concrete mixes were prepared with substitution of sand with the spent coffee grounds waste at different percentage (0%, 5%, 10%, 15% and 20% by volume of the sand in order to study the influence of this wastes on physical (Workability, bulk density and porosity, mechanical (compressive and flexural strength and Thermal (Thermal conductivity and thermal diffusivity properties of dune sand concrete. The results showed that the use of spent coffee grounds waste as partial replacement of natural sand contributes to reduce workability, bulk density and mechanical strength of sand concrete mixes with an increase on its porosity. However, the thermal characteristics are improved and especially for a level of 15% and 20% of substitution. So, it is possible to obtain an insulating material which can be used in the various types of structural components. This study ensures that reusing of waste coffee grounds in dune sand concrete gives a positive approach to reduce the cost of materials and solve some environmental problems.

Basinwide sedimentation and the continuum of paleoflow in an ancient river system: Kayenta Formation (Lower Jurassic), central portion Colorado Plateau

Science.gov (United States)

Luttrell, Patty Rubick

1993-05-01

Utilizing detailed documentation of alluvial architecture to reconstruct the continuum of paleoflow (perennial, intermittent, ephemeral), a basinwide study of the Kayenta Formation (Lower Jurassic) reveals that the northern half of the basin is characterized by sandy, low-sinuosity fluvial systems which exhibit perennial (Assoc. 1) to intermittent (Assoc. 2) discharge indicators. The rivers had headwaters east of the Uncompahgre Highlands (western Colorado) and flowed southwest across the basin depositing a braidplain of channel sands with well-preserved 3-dimensional macroforms. One significant aspect of the macroform architecture is documentation of macroform climb in both an upstream and downstream direction. The macroforms aggrade vertically by climbing (maximum 10° dip in an upstream direction) and migrating over the backs (upstream ends) of underlying macroforms. The process of macroform climb records a minimum water depth of 8 m and a maximum of 16 m which places the Kayenta perennial waterways (Assoc. 1) within a mesothermal hydrologic regime. The southern portion of the basin contains intermittent (Assoc. 2) to ephemeral (Assoc. 3) fluvial deposits, extensive floodplain preservation and eolian dune and interdune/sandsheet deposition (Assoc. 4). A tributary drainage pattern to the northwest was established by smaller, low- to moderately-sinuous streams. Eolian dune and interdune deposits migrated across this more arid windswept portion of the basin. The range of alluvial architecture present in the Kayenta attests to the diversity that can be found in a small continental sedimentary basin.

Evidence of Middle Jurassic magmatism within the Seychelles microcontinent: Implications for the breakup of Gondwana

Science.gov (United States)

Shellnutt, J. G.; Lee, T.-Y.; Chiu, H.-Y.; Lee, Y.-H.; Wong, J.

2015-12-01

The breakup of East and West Gondwana occurred during the Jurassic, but the exact timing is uncertain due to the limited exposure of rocks suitable for radioisotopic dating. Trachytic rocks from Silhouette Island, Seychelles, yielded a range of zircon ages from Paleoproterozoic to Cenozoic. The 206Pb/238U age of the trachyte is 64.9 ± 1.6 Ma (Danian) but the majority of zircons yielded an age of 163.8 ± 1.8 Ma (Callovian) with a small subset yielding an age of 147.7 ± 4.5 Ma (Tithonian). The Hf isotopes of the Callovian (ɛHf(t) = +4.1 to +13.4) and Danian (ɛHf(t) = +1.9 to +7.1) zircons indicate that they were derived from moderately depleted mantle sources whereas the Tithonian zircons (ɛHf(t) = -7.0 to -7.3) were derived from an enriched source. The identification of middle Jurassic zircons indicates that rifting and magmatism were likely contemporaneous during the initial separation of East and West Gondwana.

Realization of chiral symmetry in the ERG

International Nuclear Information System (INIS)

Echigo, Yoshio; Igarashi, Yuji

2011-01-01

We discuss within the framework of the ERG how chiral symmetry is realized in a linear σ model. A generalized Ginsparg-Wilson relation is obtained from the Ward-Takahashi identities for the Wilson action assumed to be bilinear in the Dirac fields. We construct a family of its non-perturbative solutions. The family generates the most general solutions to the Ward-Takahashi identities. Some special solutions are discussed. For each solution in this family, chiral symmetry is realized in such a way that a change in the Wilson action under non-linear symmetry transformation is canceled with a change in the functional measure. We discuss that the family of solutions reduces via a field redefinition to a family of the Wilson actions with some composite object of the scalar fields which has a simple transformation property. For this family, chiral symmetry is linearly realized with a continuum analog of the operator extension of γ 5 used on the lattice. We also show that there exist some appropriate Dirac fields which obey the standard chiral transformations with γ 5 in contrast to the lattice case. Their Yukawa interaction with scalars, however, becomes non-linear. (author)

The rediscovery and redescription of the holotype of the Late Jurassic turtle Plesiochelys etalloni

Directory of Open Access Journals (Sweden)

Jérémy Anquetin

2014-02-01

Full Text Available Plesiochelyidae are a major component of Late Jurassic shallow marine environments throughout Europe. However, the taxonomy of plesiochelyid turtles is rather confused. Over the years, many taxa have been synonymized with Plesiochelys etalloni, one of the first described species. However, the holotype of P. etalloni (and only specimen known from Lect, the type locality was lost for more than 150 years. This specimen has been recently rediscovered in the collections of the Musée d’archéologie du Jura in Lons-le-Saunier, France. For the first time since its original description in 1857, the holotype of P. etalloni is redescribed and compared to relevant material. The taxonomic status of this taxon is revised accordingly. Based on the morphology of the newly rediscovered holotype and on a reassessment of specimens from Solothurn (Switzerland, the species P. solodurensis, P. sanctaeverenae and P. langii are synonymized with P. etalloni. Known skull-shell associations for P. etalloni are re-evaluated in light of the new morphological information available since the rediscovery of this holotype specimen. Finally, we confirm that Plesiochelys is represented by a single species in the Late Jurassic of the Jura Mountains.

Documenting the global impacts of beach sand mining

Science.gov (United States)

Young, R.; Griffith, A.

2009-04-01

For centuries, beach sand has been mined for use as aggregate in concrete, for heavy minerals, and for construction fill. The global extent and impact of this phenomenon has gone relatively unnoticed by academics, NGOs, and major news sources. Most reports of sand mining activities are found at the very local scale (if the mining is ever documented at all). Yet, sand mining in many localities has resulted in the complete destruction of beach (and related) ecosystems along with severe impacts to coastal protection and tourism. The Program for the Study of Developed Shorelines at Western Carolina University and Beachcare.org have initiated the construction of a global database of beach sand mining activities. The database is being built through a combination of site visits and through the data mining of media resources, peer reviewed papers, and reports from private and governmental entities. Currently, we have documented sand mining in 35 countries on 6 continents representing the removal of millions of cubic meters of sand. Problems extend from Asia where critical infrastructure has been disrupted by sand mining to the Caribbean where policy reform has swiftly followed a highly publicized theft of sand. The Program for the Study of Developed Shorelines recently observed extensive sand mining in Morocco at the regional scale. Tens of kilometers of beach have been stripped of sand and the mining continues southward reducing hope of a thriving tourism-based economy. Problems caused by beach sand mining include: destruction of natural beaches and the ecosystems they protect (e.g. dunes, wetlands), habitat loss for globally important species (e.g. turtles, shorebirds), destruction of nearshore marine ecosystems, increased shoreline erosion rates, reduced protection from storms, tsunamis, and wave events, and economic losses through tourist abandonment and loss of coastal aesthetics. The threats posed by sand mining are made even more critical given the prospect of a

Studies on various characteristics of concrete structures using crushed sand

International Nuclear Information System (INIS)

Mimatsu, Makoto; Sugita, Hideaki; Yonemura, Masataka.

1985-01-01

With the recent advances of construction industry, the demands for concrete, hence for aggregate, are rising. The sand as such is in extreme shortage due to the exhaustion of river sand. Under the situation, the recent trends are for the use of crushed sand, i.e. the artificial sand obtained by crushing rocks, which have advantages of stabilized quality and adequate supplies. In building of nuclear power plants requiring large amounts of concrete, the usage of crushed sand is now unavoidable. The following are described : the situation of aggregate in Kyushu. production method of crushed sand and the quality standards, rocks used for crushed stone and sand and the properties, quality survey on crushed sand and the basic tests, characteristic tests of crushed-stone and -sand mixed concrete, the application of crushed sand in structures of the Sendai Nuclear Power Station. (Mori, K.)

The ARASE (ERG) magnetic field investigation

Science.gov (United States)

Matsuoka, Ayako; Teramoto, Mariko; Nomura, Reiko; Nosé, Masahito; Fujimoto, Akiko; Tanaka, Yoshimasa; Shinohara, Manabu; Nagatsuma, Tsutomu; Shiokawa, Kazuo; Obana, Yuki; Miyoshi, Yoshizumi; Mita, Makoto; Takashima, Takeshi; Shinohara, Iku

2018-03-01

The fluxgate magnetometer for the Arase (ERG) spacecraft mission was built to investigate particle acceleration processes in the inner magnetosphere. Precise measurements of the field intensity and direction are essential in studying the motion of particles, the properties of waves interacting with the particles, and magnetic field variations induced by electric currents. By observing temporal field variations, we will more deeply understand magnetohydrodynamic and electromagnetic ion-cyclotron waves in the ultra-low-frequency range, which can cause production and loss of relativistic electrons and ring-current particles. The hardware and software designs of the Magnetic Field Experiment (MGF) were optimized to meet the requirements for studying these phenomena. The MGF makes measurements at a sampling rate of 256 vectors/s, and the data are averaged onboard to fit the telemetry budget. The magnetometer switches the dynamic range between ± 8000 and ± 60,000 nT, depending on the local magnetic field intensity. The experiment is calibrated by preflight tests and through analysis of in-orbit data. MGF data are edited into files with a common data file format, archived on a data server, and made available to the science community. Magnetic field observation by the MGF will significantly improve our knowledge of the growth and decay of radiation belts and ring currents, as well as the dynamics of geospace storms.

Changes in cortical cytoskeletal and extracellular matrix gene expression in prostate cancer are related to oncogenic ERG deregulation

International Nuclear Information System (INIS)

Schulz, Wolfgang A; Ingenwerth, Marc; Djuidje, Carolle E; Hader, Christiane; Rahnenführer, Jörg; Engers, Rainer

2010-01-01

The cortical cytoskeleton network connects the actin cytoskeleton to various membrane proteins, influencing cell adhesion, polarity, migration and response to extracellular signals. Previous studies have suggested changes in the expression of specific components in prostate cancer, especially of 4.1 proteins (encoded by EPB41 genes) which form nodes in this network. Expression of EPB41L1, EPB41L2, EPB41L3 (protein: 4.1B), EPB41L4B (EHM2), EPB41L5, EPB49 (dematin), VIL2 (ezrin), and DLG1 (summarized as „cortical cytoskeleton' genes) as well as ERG was measured by quantitative RT-PCR in a well-characterized set of 45 M0 prostate adenocarcinoma and 13 benign tissues. Hypermethylation of EPB41L3 and GSTP1 was compared in 93 cancer tissues by methylation-specific PCR. Expression of 4.1B was further studied by immunohistochemistry. EPB41L1 and EPB41L3 were significantly downregulated and EPB41L4B was upregulated in cancer tissues. Low EPB41L1 or high EPB41L4B expression were associated with earlier biochemical recurrence. None of the other cortical cytoskeleton genes displayed expression changes, in particular EPB49 and VIL2, despite hints from previous studies. EPB41L3 downregulation was significantly associated with hypermethylation of its promoter and strongly correlated with GSTP1 hypermethylation. Protein 4.1B was detected most strongly in the basal cells of normal prostate epithelia. Its expression in carcinoma cells was similar to the weaker one in normal luminal cells. EPB41L3 downregulation and EPB41L4B upregulation were essentially restricted to the 22 cases with ERG overexpression. Expression changes in EPB41L3 and EPB41L4B closely paralleled those previously observed for the extracellular matrix genes FBLN1 and SPOCK1, respectively. Specific changes in the cortical cytoskeleton were observed during prostate cancer progression. They parallel changes in the expression of extracellular matrix components and all together appear to be associated with

Structure and absolute configuration of Jurassic polyketide-derived spiroborate pigments obtained from microgram quantities.

OpenAIRE

Wolkenstein, K.; Sun , H.; Falk, H.; Griesinger, C.

2015-01-01

Complete structural elucidation of natural products is often challenging due to structural complexity and limited availability. This is true for present-day secondary metabolites, but even more for exceptionally preserved secondary metabolites of ancient organisms that potentially provide insights into the evolutionary history of natural products. Here, we report the full structure and absolute configuration of the borolithochromes, enigmatic boron-containing pigments from a Jurassic putative...

Influence of sand base preparation on properties of chromite moulding sands with sodium silicate hardened with selected methods

Directory of Open Access Journals (Sweden)

Stachowicz M.

2017-03-01

Full Text Available The paper presents a research on the relation between thermal preparation of chromite sand base of moulding sands containing sodium silicate, hardened with selected physical and chemical methods, and structure of the created bonding bridges. Test specimens were prepared of chromite sand - fresh or baked at 950°C for 10 or 24 hours - mixed with 0.5 wt.% of the selected non-modified inorganic binder and, after forming, were hardened with CO2 or liquid esters, dried traditionally or heated with microwaves at 2.45 GHz. It was shown on the grounds of SEM observations that the time of baking the base sand and the hardening method significantly affect structure of the bonding bridges and are correlated with mechanical properties of the moulding sands. It was found that hardening chromite-based moulding mixtures with physical methods is much more favourable than hardening with chemical methods, guaranteeing also more than ten times higher mechanical properties.

Experimental perforation of tubing with a hydraulic sand jet

Energy Technology Data Exchange (ETDEWEB)

Semenov, Yu V

1970-01-01

A series of field tests has shown that perforation with a hydraulic sand jet improves the quality of well completion. The sand jet does not crack the cement sheath or the casing, and the perforations are larger and deeper than perforations formed by explosive charges. Fluid circulation during sand jet perforation can safely be stopped for at least 10 min. Water containing a surfactant can be used as a sand carrier. Sand jet perforation allows successful completion of wells cased by 2 tubing strings. Sand jet perforation can be used to clean the borehole well and to remove foreign objects from the well.

Effect of manufactured sand on the durability characteristics of concrete

Directory of Open Access Journals (Sweden)

S. S. SARAVANAN

2016-12-01

Full Text Available Concrete is the most sought after material due to increase in construction activities and infrastructural developments. Availability of natural sand is decreasing thereby increase in the cost of construction. In the present work undertaken, an attempt has been made to give an alternative to natural sand. Optimization of replacement of natural sand with manufactured sand in concrete, durability studies such as water absorption, rapid chloride permeability test, sorptivity, acid resistance, alkaline resistance, impact resistance and abrasion resistance of M40 and M50 grades of concrete have been studied with manufactured sand as fine aggregate and compared the results with the conventional sand concrete. The results shows that there is an increase in the durability properties up to 70 % level of replacements of sand with manufactured sand as fine aggregate and for 100 % use of manufactured sand also gives the better durability than the conventional sand concrete.

A new rhynchocephalian from the late jurassic of Germany with a dentition that is unique amongst tetrapods.

Science.gov (United States)

Rauhut, Oliver W M; Heyng, Alexander M; López-Arbarello, Adriana; Hecker, Andreas

2012-01-01

Rhynchocephalians, the sister group of squamates (lizards and snakes), are only represented by the single genus Sphenodon today. This taxon is often considered to represent a very conservative lineage. However, rhynchocephalians were common during the late Triassic to latest Jurassic periods, but rapidly declined afterwards, which is generally attributed to their supposedly adaptive inferiority to squamates and/or Mesozoic mammals, which radiated at that time. New finds of Mesozoic rhynchocephalians can thus provide important new information on the evolutionary history of the group. A new fossil relative of Sphenodon from the latest Jurassic of southern Germany, Oenosaurus muehlheimensis gen. et sp. nov., presents a dentition that is unique amongst tetrapods. The dentition of this taxon consists of massive, continuously growing tooth plates, probably indicating a crushing dentition, thus representing a previously unknown trophic adaptation in rhynchocephalians. The evolution of the extraordinary dentition of Oenosaurus from the already highly specialized Zahnanlage generally present in derived rhynchocephalians demonstrates an unexpected evolutionary plasticity of these animals. Together with other lines of evidence, this seriously casts doubts on the assumption that rhynchocephalians are a conservative and adaptively inferior lineage. Furthermore, the new taxon underlines the high morphological and ecological diversity of rhynchocephalians in the latest Jurassic of Europe, just before the decline of this lineage on this continent. Thus, selection pressure by radiating squamates or Mesozoic mammals alone might not be sufficient to explain the demise of the clade in the Late Mesozoic, and climate change in the course of the fragmentation of the supercontinent of Pangaea might have played a major role.

Experimental Study on Superfine Sand Concrete Mixed by Double Mixing Technology

OpenAIRE

yuqing zhao

2013-01-01

Traditional concept thought that medium sand and fine sand can be used to mix concrete, superfine sand can not used to mix concrete. This makes the source of superfine sand limited. With the shortage of medium sand and fine sand, it is imperative to exploit the resource of superfine sand. Superfine sand concrete is mixed by means of Double-doped Technology-ultra-fine fly ash and super plasticizer. Primary factor influencing superfine sand concrete strength is studied by orthogonal test, the o...

The physics of wind-blown sand and dust.

Science.gov (United States)

Kok, Jasper F; Parteli, Eric J R; Michaels, Timothy I; Karam, Diana Bou

2012-10-01

The transport of sand and dust by wind is a potent erosional force, creates sand dunes and ripples, and loads the atmosphere with suspended dust aerosols. This paper presents an extensive review of the physics of wind-blown sand and dust on Earth and Mars. Specifically, we review the physics of aeolian saltation, the formation and development of sand dunes and ripples, the physics of dust aerosol emission, the weather phenomena that trigger dust storms, and the lifting of dust by dust devils and other small-scale vortices. We also discuss the physics of wind-blown sand and dune formation on Venus and Titan.

SPINK1 Overexpression in Localized Prostate Cancer: a Rare Event Inversely Associated with ERG Expression and Exclusive of Homozygous PTEN Deletion.

Science.gov (United States)

Huang, Kuo-Cheng; Evans, Andrew; Donnelly, Bryan; Bismar, Tarek A

2017-04-01

SPINK1 is proposed as potential prognostic marker in prostate cancer (PCA). However, its relation to PTEN and ERG in localized PCA remains unclear. The study population consisted of two independent cohorts of men treated by radical prostatectomy for localized PCA (discovery n = 218 and validation n = 129). Patterns of association between SPINK1 and each of ERG and PTEN were evaluated by immunohistochemistry and fluorescence in situ hybridization. Associations between SPINK1 expression and various pathologic parameters and clinical outcome were also investigated. SPINK1 was expressed in 15.3 % and 10.9 % of cases in the discovery and validation cohort, respectively. SPINK expression was observed in 5.56 % of high-grade prostatic intraepithelial neoplasia and 1.1 % of adjacent morphologically benign prostatic glands. SPINK1 and ERG expression were almost exclusive, with only 1.0 % of the cases co-expressing both in the same core sample. SPINK1 interfocal and within-core heterogeneity was noted in 29.2 % and 64.6 % of cases, respectively. SPINK1 expression was not significantly associated with PTEN deletion in the two cohorts (p = 0.871 for discovery cohort and p = 0.293 for validation cohort). While SPINK1 expression did occur with hemizygous PTEN deletion, there was a complete absence of SPINK1 expression in PCA showing homozygous PTEN deletion, which was confirmed in the validation cohort (p = 0.02). Despite SPINK1's association with higher Gleason score (>7) (p = 0.02), it was not associated with other pathological parameters or biochemical recurrence post-radical prostatectomy. We documented absolute exclusivity between SPINK1 overexpression and homozygous PTEN deletion in localized PCA. SPINK1 and ERG expressions are exclusive events in PCA. SPINK1 is not of added prognostic value in localized PCA.

Petrotectonic characteristics, geochemistry, and U-Pb geochronology of Jurassic plutons in the Upper Magdalena Valley-Colombia: Implications on the evolution of magmatic arcs in the NW Andes

Science.gov (United States)

Rodríguez, G.; Arango, M. I.; Zapata, G.; Bermúdez, J. G.

2018-01-01

Field, petrographic, and geochemical characterization along with U-Pb zircon geochronology of the Jurassic plutons exposed in the Upper Magdalena Valley (Colombia) allowed recognizing distinct western and eastern suites formed in at least three magmatic pulses. The western plutons crop out between the eastern flank of the Central Cordillera and the Las Minas range, being limited by the Avirama and the Betania-El Agrado faults. The western suite comprises a quartz monzonite - quartz monzodiorite - quartz diorite series and subordinate monzogranites. Chemically, the rocks are high-K calc-alkaline I-type granitoids (some reaching the shoshonitic series) with metaluminous of magnesium affinity. Trace-element tectonic discrimination is consistent with magmatism in a continental arc environment. Most rocks of this suite crystallized between 195 and 186 Ma (Early Jurassic, Pliensbachian), but locally some plutons yielded younger ages between 182 and 179 Ma (Early Jurassic, Toarcian). The eastern suite crops out in the eastern margin of the Upper Magdalena Valley, east of the Betania - El Agrado fault. Plutons of this unit belong to the monzogranite series with rock types ranging between syenogranites and granodiorites. They are high-K calc-alkaline continental granitoids, some metaluminous and some peraluminous, related to I-type granites generated in a volcanic arc. Crystallization of the suite was between 173 and 169 Ma (Middle Jurassic, Aalenian-Bajocian), but locally these rocks contain zircon with earlier inherited ages related to the magmatic pulse of the western suite between 182 and 179 Ma (Early Jurassic, Toarcian). The evolution of the Jurassic plutons in the Upper Magdalena Valley is best explained by onset or increase in subduction erosion of the accretionary prism. This explains the eastward migration of the arc away from the trench. Subduction of prism sediments increased the water flux from the subducting slab, decreasing solidus temperatures, therefore

Sand Dunes with Frost

Science.gov (United States)

2004-01-01

9 May 2004 This Mars Global Surveyor (MGS) Mars Orbiter Camera (MOC) image shows a suite of frost-covered sand dunes in the north polar region of Mars in early spring, 2004. The dunes indicate wind transport of sand from left to right (west to east). These landforms are located near 78.1oN, 220.8oW. This picture is illuminated by sunlight from the lower left and covers an area about 3 km (1.9 mi) across.

ELECTROOCULOGRAPHY AND PATTERN ERG IN THE DIAGNOSTICS OF BEST’S VITELLIFORM DISTROPHY

Directory of Open Access Journals (Sweden)

Martina Jarc-Vidmar

2002-12-01

Full Text Available Background. The aim of the study was to develop electrooculography in accordance with ISCEV standards and to test its accuracy in the diagnosis of Best’s disease, where the EOG results should be invariably abnormal in all affected members. The pathophysiology of Best’s disease is not yet completely understood, so pattern and full field flash ERG responses compared to visual acuity and stage of the disease were used to asses the neurosensory retinal function in different stages of Best’s disease.Patients and methods. The EOG was recorded in accordance with ISCEV standards on 30 healthy individuals to determine normal values of our laboratory. Pattern as well as photopic and scotopic ERG were recorded on 24 eyes of 12 patients with typical Best’s disease with abnormal EOG responses. The results were compared to visual acuity and stage of the disease.Results. Our EOG normative data are comparable with results from other laboratories: the mean value of Arden ratio is 2.32, the range of 2 standard deviations from the mean value is from 1.6 to 3.04. The patients with Best’s disease have statisticaly significant lower values of Arden ratio (the mean value beeing 1.19. 12 patients (24 eyes with Best’s disease with abnormal EOG values were divided in two groups according to visual acuity. In the first group of 12 eyes with visual acuity > 0.5 PERG P50 and N95 responses were all in the normal range. In the second group of 12 eyes with visual acuity 0.5 or less PERG showed reduced both P50 and N95 responses in 5 eyes, and N95 solely, in two eyes.The photopic and scotopic electroretinographic responses were normal in all patients. Progression of the disease, seen in the deterioration of visual acuity, corresponded well with reduction of both PERG P50 and N95 responses. There was no correlation found between visual acuity and EOG responses.Conclusions. In the study on patients with Best’s disease, it was confirmed that EOG is a very sensitive

Paleomagnetic tests for tectonic reconstructions of the Late Jurassic-Early Cretaceous Woyla Group, Sumatra

Science.gov (United States)

Advokaat, Eldert; Bongers, Mayke; van Hinsbergen, Douwe; Rudyawan, Alfend; Marshal, Edo

2017-04-01

SE Asia consists of multiple continental blocks, volcanic arcs and suture zones representing remnants of closing ocean basins. The core of this mainland is called Sundaland, and was formed by accretion of continental and arc fragments during the Paleozoic and Mesozoic. The former positions of these blocks are still uncertain but reconstructions based on tectonostratigraphic, palaeobiogeographic, geological and palaeomagnetic studies indicate the continental terranes separated from the eastern margin of Gondwana. During the mid-Cretaceous, more continental and arc fragments accreted to Sundaland, including the intra-oceanic Woyla Arc now exposed on Sumatra. These continental fragments were derived from Australia, but the former position of the Woyla Arc is unconstrained. Interpretations on the former position of the Woyla Arc fall in two end-member groups. The first group interprets the Woyla Arc to be separated from West Sumatra by a small back-arc basin. This back arc basin opened in the Late Jurassic, and closed mid-Cretaceous, when the Woyla Arc collided with West Sumatra. The other group interprets the Woyla Arc to be derived from Gondwana, at a position close to the northern margin of Greater India in the Late Jurassic. Subsequently the Woyla Arc moved northwards and collided with West Sumatra in the mid-Cretaceous. Since these scenarios predict very different plate kinematic evolutions for the Neotethyan realm, we here aim to place paleomagnetic constraints on paleolatitudinal evolution of the Woyla Arc. The Woyla Arc consists mainly of basaltic to andesitic volcanics and dykes, and volcaniclastic shales and sandstones. Associated limestones with volcanic debris are interpreted as fringing reefs. This assemblage is interpreted as remnants of an Early Cretaceous intra-oceanic arc. West Sumatra exposes granites, surrounded by quartz sandstones, shales and volcanic tuffs. These sediments are in part metamorphosed. This assemblage is interpreted as a Jurassic

Relationships between sand and water quality at recreational beaches.

Science.gov (United States)

Phillips, Matthew C; Solo-Gabriele, Helena M; Piggot, Alan M; Klaus, James S; Zhang, Yifan

2011-12-15

Enterococci are used to assess the risk of negative human health impacts from recreational waters. Studies have shown sustained populations of enterococci within sediments of beaches but comprehensive surveys of multiple tidal zones on beaches in a regional area and their relationship to beach management decisions are limited. We sampled three tidal zones on eight South Florida beaches in Miami-Dade and Broward counties and found that enterococci were ubiquitous within South Florida beach sands although their levels varied greatly both among the beaches and between the supratidal, intertidal and subtidal zones. The supratidal sands consistently had significantly higher (p sand) than the other two zones. Levels of enterococci within the subtidal sand correlated with the average level of enterococci in the water (CFU/100mL) for the season during which samples were collected (r(s) = 0.73). The average sand enterococci content over all the zones on each beach correlated with the average water enterococci levels of the year prior to sand samplings (r(s) = 0.64) as well as the average water enterococci levels for the month after sand samplings (r(s) = 0.54). Results indicate a connection between levels of enterococci in beach water and sands throughout South Florida's beaches and suggest that the sands are one of the predominant reservoirs of enterococci impacting beach water quality. As a result, beaches with lower levels of enterococci in the sand had fewer exceedences relative to beaches with higher levels of sand enterococci. More research should focus on evaluating beach sand quality as a means to predict and regulate marine recreational water quality. Copyright © 2011 Elsevier Ltd. All rights reserved.

Compressive Strength of Compacted Clay-Sand Mixes

Directory of Open Access Journals (Sweden)

Faseel Suleman Khan

2014-01-01

Full Text Available The use of sand to improve the strength of natural clays provides a viable alternative for civil infrastructure construction involving earthwork. The main objective of this note was to investigate the compressive strength of compacted clay-sand mixes. A natural clay of high plasticity was mixed with 20% and 40% sand (SP and their compaction and strength properties were determined. Results indicated that the investigated materials exhibited a brittle behaviour on the dry side of optimum and a ductile behaviour on the wet side of optimum. For each material, the compressive strength increased with an increase in density following a power law function. Conversely, the compressive strength increased with decreasing water content of the material following a similar function. Finally, the compressive strength decreased with an increase in sand content because of increased material heterogeneity and loss of sand grains from the sides during shearing.

Revision of the Late Jurassic crocodyliform Alligatorellus, and evidence for allopatric speciation driving high diversity in western European atoposaurids.

Science.gov (United States)

Tennant, Jonathan P; Mannion, Philip D

2014-01-01

Atoposaurid crocodyliforms represent an important faunal component of Late Jurassic to Early Cretaceous Laurasian semi-aquatic to terrestrial ecosystems, with numerous spatiotemporally contemporaneous atoposaurids known from western Europe. In particular, the Late Jurassic of France and Germany records evidence for high diversity and possible sympatric atoposaurid species belonging to Alligatorellus, Alligatorium and Atoposaurus. However, atoposaurid taxonomy has received little attention, and many species are in need of revision. As such, this potentially high European diversity within a narrow spatiotemporal range might be a taxonomic artefact. Here we provide a taxonomic and anatomical revision of the Late Jurassic atoposaurid Alligatorellus. Initially described as A. beaumonti from the Kimmeridgian of Cerin, eastern France, additional material from the Tithonian of Solnhofen, south-eastern Germany, was subsequently referred to this species, with the two occurrences differentiated as A. beaumonti beaumonti and A. beaumonti bavaricus, respectively. We provide a revised diagnosis for the genus Alligatorellus, and note a number of anatomical differences between the French and German specimens, including osteoderm morphology and the configuration and pattern of sculpting of cranial elements. Consequently, we restrict the name Alligatorellus beaumonti to include only the French remains, and raise the rank of the German material to a distinct species: Alligatorellus bavaricus. A new diagnosis is provided for both species, and we suggest that a recently referred specimen from a coeval German locality cannot be conclusively referred to Alligatorellus. Although it has previously been suggested that Alligatorellus, Alligatorium and Atoposaurus might represent a single growth series of one species, we find no conclusive evidence to support this proposal, and provide a number of morphological differences to distinguish these three taxa that appear to be independent of

Controls on the abruptness of gravel-sand transitions

Science.gov (United States)

Venditti, J. G.; Church, M. A.; Lamb, M. P.; Domarad, N.; Rennie, C. D.

2014-12-01

As gravel-bedded rivers fine downstream, they characteristically exhibit an abrupt transition from gravel- to sand-bed. This is the only abrupt transition in grain-size that occurs in the fluvial system and has attracted considerable attention. A number of competing theories have been proposed to account for the abruptness of the transition, including base-level control, attrition of ~10mm gravel to produce sand, and sediment sorting processes. The prevailing theory for the emergence of abrupt transitions is size selective sorting of bimodal sediment wherein gravel deposits due to downstream declining shear stress, fining the bedload until a sand-bed emerges. We explored this hypothesis by examining grain-size, shear stress, gravel mobility and sand suspension thresholds through the gravel-sand transition (GST) of the Fraser River, British Columbia. The Fraser GST is an arrested gravel wedge with patches of gravel downstream of the wedge forming a diffuse extension. There is an abrupt change in bed slope through the transition that leads to an abrupt change in shear stress. The GST, bed-slope change and backwater caused by the ocean are all coincident spatially, which enhances the sharpness of the GST. Interestingly, the bimodal reach of the river occurs downstream of the GST and exhibits no downstream gradients in shear stress, suspended sediment flux, gravel mobility or sand suspension thresholds. This calls into question the prevailing theory for the emergence of an abrupt GST by size selective sorting. We provide evidence, both empirical and theoretical, that suggests the emergence of an abrupt GST is caused by rapid deposition of sand when fine gravel deposits. We argue that the emergence of gravel-sand transitions is a consequence of gravel-bedded rivers adopting a steeper slope than sand-bedded rivers. The abruptness arises because the bed slope required to convey the gravel load fixes the distal location of a terminal gravel wedge, and once the river has

Oil sands to the rescue: oil sand microbial communities can degrade recalcitrant alkyl phenyl alkanoic acids

Energy Technology Data Exchange (ETDEWEB)

Whitby, Corinne [University of Essex (Canada)], email: cwhitby@essex.ac.uk

2011-07-01

Almost half of all global oil reserves are found as biodegraded heavy oils found in vast tar sand deposits located in North and South America and these account for 47% of Canadian oil production. Oil sand extraction generates large amounts of toxic waste water, known as oil sand process waters (OSPW), that are stored in large tailing ponds that contain toxic compounds like naphthenic acids (NAs). The presence of NAs creates problems like toxicity, corrosion, and the formation of calcium napthenate deposits which block pipelines and other infrastructure and need to be removed. This paper presents oil sand microbial communities that can degrade these NAs. The approach is to apply new aliphatic and aromatic NAs as substrates to supplement and identify NA degrading microbes and also to identify the metabolites produced and explain NA degradation pathways and the functional genes involved. The chemistry and the processes involved are explained. From the results, it is suggested that pure cultures of P. putida KT2440 be used against NAs.

Potential building sand deposits in Songkhla province area

Directory of Open Access Journals (Sweden)

Kooptarnond, K.

2002-10-01

Full Text Available An investigation of potential building sand deposits in Songkhla province area subdivided them into four regions according to their accumulation in various alluvial plains, meanders throughout alluvial deposits and residual soils. Four selected deposits, were Rattaphum-Khuan Niang, U-Taphao river, Na Mom, and Chana-Thepha regions. Information obtained from these deposits revealed a good correlation between the geomorphological features as interpreted from aerial photographs and those identified from vertical electrical resistivity sounding results. Sand samples were analysed for their physical and chemical properties. Petrographic studies were also undertaken to characterize the composition types, texture and shapes. An overview of the sand properties was used them to be within the acceptable limits for building sand. However, relatively high organic impurities and soundness were found in sand from Khuan Niang and Na Mom deposits. The result indicated a potential reconnaissance mineral resource of about 46 square kilometres.A reserve evaluation for natural building sand was carried out by using Geographic Information System (GIS. Maps of the various parameters considered were constructed in digital database format with the aid of Arc/Info and ArcView software. Overlay mapping and buffer zone modules were performed to evaluate inferred resources of building sand. The key parameters of analysis included the distance from transportation, distance from streams, lithology and thickness of sand layers. The remaining inferred sand total was of about 386 million cubic metres or about 1,021 million metric tons was therefore estimated, of which 60 percent lies in the Rattaphum-Khuan Niang region and 40 percent in the other regions.

Stakeholder relations in the oil sands : managing uncertainty

Energy Technology Data Exchange (ETDEWEB)

NONE

2009-05-15

Alberta's oil sands are now at the crossroads of a series of significant and complex global issues that will require careful negotiation by all stakeholders involved in the oil sands industry. This paper discussed methods of managing uncertainty and risk related to the oil sands industry's agenda for the future. Oil sands developers must continue to secure permission from communities and other key stakeholders in order to develop oil sand projects. Stakeholder relations between oil sands operators, First Nations, and Metis Nation communities must ensure that respect is maintained while environmental impacts are minimized and long-term economic benefits are secured for all parties. Environmental non-governmental organizations (ENGOs) must ensure that oil sands resources are developed responsibly, and that environmental standards are maintained. Seven key shifts in stakeholder relations resulting from the recent economic crisis were identified. These included (1) withdrawal from the multi-stakeholder process, (2) increased focus on government to demonstrate policy leadership, (3) a stronger push from ENGOs to express environmental concerns, (4) global lobby and public relations efforts from ENGOs, (5) companies retreating to local community stakeholders, (6) more active demands from First Nations and Metis Nations groups, and (7) companies challenging ENGO campaigns. The study concluded by suggesting that government leadership is needed to clear policy and regulatory frameworks for Canada's oil sands.

Providing floating capabilities in latest-generation sand screens

Energy Technology Data Exchange (ETDEWEB)

Bowen, E.G.; Coronado, M.P. [Society of Petroleum Engineers, Richardson, TX (United States)]|[Baker Hughes, Houston, TX (United States)

2008-10-15

Alternative production methods are needed for the massive reserves located in the bitumen region of Canada's tar sands. The area has over 100 installations of sand screens/slotted liners in both injection and production legs using steam-assisted gravity drainage (SAGD) technology. Multiple wells must be drilled from a single pad because of the sensitive nature of the environment. With significant depths of these wells, a floating sand screen provides assurance that the sand screen will reach the desired depth. Paraffin is generally used to plug the flow access of the screen during installation. This paper discussed a new technology that has been developed to allow for sand screen installations without relying on paraffin wax to withstand differential pressure. The new technology uses a hydro-mechanical valving system incorporated into the screen design to temporarily close off the screen while being run in the hole. The paper described how the technology could provide a reliable, time-saving solution for SAGD installations when floating sand control screens are needed. The paper discussed current technology and its limitations, sand screen installation, screen design for floating applications, and additional applications. It was concluded that this technology solution provides a unique alternative to the methods currently used to install sand screens with SAGD technology in the fast growing Canadian market for bitumen recovery. 2 refs., 5 figs.

Marine ecosystem resilience during extreme deoxygenation: the Early Jurassic oceanic anoxic event.

Science.gov (United States)

Caswell, Bryony A; Frid, Christopher L J

2017-01-01

Global warming during the Early Jurassic, and associated widespread ocean deoxygenation, was comparable in scale with the changes projected for the next century. This study quantifies the impact of severe global environmental change on the biological traits of marine communities that define the ecological roles and functions they deliver. We document centennial-millennial variability in the biological trait composition of Early Jurassic (Toarcian) seafloor communities and examine how this changed during the event using biological traits analysis. Environmental changes preceding the global oceanic anoxic event (OAE) produced an ecological shift leading to stressed benthic palaeocommunities with reduced resilience to the subsequent OAE. Changes in traits and ecological succession coincided with major environmental changes; and were of similar nature and magnitude to those in severely deoxygenated benthic communities today despite the very different timescales. Changes in community composition were linked to local redox conditions whereas changes in populations of opportunists were driven by primary productivity. Throughout most of the OAE substitutions by tolerant taxa conserved the trait composition and hence functioning, but periods of severe deoxygenation caused benthic defaunation that would have resulted in functional collapse. Following the OAE recovery was slow probably because the global nature of the event restricted opportunities for recruitment from outside the basin. Our findings suggest that future systems undergoing deoxygenation may initially show functional resilience, but severe global deoxygenation will impact traits and ecosystem functioning and, by limiting the species pool, will slow recovery rates.

Revegetation and management of tailings sand slopes from tar sand extraction: 1978 results

Energy Technology Data Exchange (ETDEWEB)

Rowell, M J

1979-01-01

The results are reported of research into the revegetation of two areas on a steeply sloping dike composed of tailings sand from tar sand extraction at the Great Canadian Oil Sand Limited plant at Fort McMurray, Alberta. One area was seeded with three pasture grasses and two legumes in 1971 after the slope surface had been mixed with peat to a depth of 15 cm. A second area had been amended with peat or peat and overburden and differing rates of fertilizer added. A mix containing nine grasses, four legumes, and oats, as a companion crop, was seeded in July 1976. The objectives of the research were to study methods for the establishment of a stable vegetative cover that would prevent erosion of the slope and, in time, might become a self maintaining unit. Tillage of soil amendments to a depth of 15 cm and 30 cm were compared in promoting deeper rooting and stabilizing of the slope.

Developing new markets for oil sands products

International Nuclear Information System (INIS)

Crandall, G.

2004-01-01

This paper presents a review by Purvin and Gertz of western Canadian crude oil supply. This energy consulting firm provides advise to the energy sector. It suggests that oil sands production will surpass declining conventional production. Oil sands supply includes bitumen, synthetic crude oil (SCO), and diluent. It is forecasted that oil sands will increase from 42 per cent of western supply in 2002 to 78 per cent in 2015. The potential of Alberta's oil sands was discussed along with a recent study of refined products and petrochemicals from bitumen. Upgrading, refining and petrochemical case studies were presented. The author examined if a Canadian oil sands upgrading project with high capital costs can be competitive with competing projects in the United States and internationally. In addition to supply and demand issues, the presentation examined infrastructure capability and market potential in the United States. The economic potential and risks of preferred business cases compared to upgrading to SCO were also evaluated. 15 figs

The behavior of gaseous iodine in sand

International Nuclear Information System (INIS)

Takahashi, Kanji

1974-01-01

Radioactive iodine gas was passed through 10 different sands collected at rivers and hills. The relation between the amount of the loaded gas and the amount of adsorbed gas was determined at room temperature, 50 -- 60 0 C, and 90 -- 100 0 C under humidity of 2 sand. This amount was about 1 -- 3 times as much as that of monomolecular membrane adsorption, 0.2 -- 0.3 μg/cm 2 . The decrease of adsorption amount that accompanies the increase of humidity is attributable to the decrease of effective surface area of sand due to the presence of water. The transport of iodine in sand was studied by passing gaseous iodine through a glass tubing packed with sand. The distribution in the flow direction of iodine indicated that the ease of desorption depends upon the situation of adsorption. Easily desorbed case was named Henry type adsorption. Hardly desorbed case was named absorption type. Discussion is made on experimental results. (Fukutomi, T.)

Bioaugmentation of flow-through sand filters

DEFF Research Database (Denmark)

Samuelsen, Elin Djurhuus

for degradation performances in flow-through sand columns, with the aim of identifying a suitable inoculant strain for future environmental applications. Another aim was to identify a suitable genetic marker to monitor phenoxy acid degradation in strain Sphingobium sp. PM2. We were not able to link motility...... and biofilm formation to the strains´ ability to adhere to sand. Nevertheless, a correlation was found between cell surface hydrophobicity and adhesion and overall degradation performances in flow-through sand columns. We identified S phingobium sp. PM2 as a promising inoculant strain, displaying efficient...... MCPA degradation for prolonged periods in flow-through sand columns. In an expression study of catabolic genes with putative roles in phenoxy acid degradation, we observed a marked upregulation of catabolic genes cadA and tfdC upon exposure to MCPA, 2,4-D, dichlorprop and mecoprop in strain PM2, which...

Total petroleum systems of the Paleozoic and Jurassic, Greater Ghawar Uplift and adjoining provinces of central Saudi Arabia and northern Arabian-Persian Gulf

Science.gov (United States)

Pollastro, Richard M.

2003-01-01

The greater Paleozoic and Jurassic petroleum systems of the Arabian Peninsula form two of the most prolific petroleum-producing systems in the world. Source rocks of these systems extend throughout the eastern Arabian Peninsula and Arabian-Persian Gulf. Primary elements of these Paleozoic and Jurassic petroleum systems - source, reservoir, and seal rocks - are of great areal extent and exceptional quality. The combination of these regionally extensive, exceptional petroleum-system elements, and the formation of large subtle structural closures prior to, or coincident with, peak oil generation and migration, have produced oil and gas fields with reserve volumes second to none.

Booming Sand Dunes

Science.gov (United States)

Vriend, Nathalie

"Booming" sand dunes are able to produce low-frequency sound that resembles a pure note from a music instrument. The sound has a dominant audible frequency (70-105 Hz) and several higher harmonics and may be heard from far distances away. A natural or induced avalanche from a slip face of the booming dune triggers the emission that may last for several minutes. There are various references in travel literature to the phenomenon, but to date no scientific explanation covered all field observations. This thesis introduces a new physical model that describes the phenomenon of booming dunes. The waveguide model explains the selection of the booming frequency and the amplification of the sound in terms of constructive interference in a confined geometry. The frequency of the booming is a direct function of the dimensions and velocities in the waveguide. The higher harmonics are related to the higher modes of propagation in the waveguide. The experimental validation includes quantitative field research at the booming dunes of the Mojave Desert and Death Valley National Park. Microphone and geophone recordings of the acoustic and seismic emission show a variation of booming frequency in space and time. The analysis of the sensor data quantifies wave propagation characteristics such as speed, dispersion, and nonlinear effects and allows the distinction between the source mechanism of the booming and the booming itself. The migration of sand dunes results from a complicated interplay between dune building, wind regime, and precipitation. The morphological and morphodynamical characteristics of two field locations are analyzed with various geophysical techniques. Ground-penetrating radar images the subsurface structure of the dunes and reveal a natural, internal layering that is directly related to the history of dune migration. The seismic velocity increases abruptly with depth and gradually increases with downhill position due to compaction. Sand sampling shows local

Oil sands economic impacts Canada : CERI report : backgrounder

International Nuclear Information System (INIS)

2005-09-01

Oil sands production now accounts for 1 out of every 2 barrels of supply in Western Canada. It is anticipated that Alberta's oil sands sector will experience significant growth over the next few decades. This paper provided an outline of the challenges and economic impacts resulting from oil sands development in Canada. Alberta's oil sands reserves are estimated at 175 billion barrels that are deemed economically recoverable using current technology. At current production levels, reserves will sustain production of 2.5 million barrels per day for the next 200 years. A study by the Canadian Energy Research Institute (CERI) has forecast $100 billion in investment for the 2000-2020 period. Numerous companies hold leases and are planning new projects. A number of recent advances in oil sands technology are expected to further reduce costs as development matures. A royalty and tax regime that provides long-term fiscal certainty is a key factor that supports current oil sands growth forecasts. The CERI study has indicated that economic spinoffs from oil sands development relate to employment generated outside of Alberta, and that the largest percentage of government revenue accrues to the federal government. However, development may be constrained because the pace of growth in the sector may exceed underlying infrastructure related to roads, housing and municipal services. An adequate workforce of qualified trades and technical and professional people is also crucial. Several pipeline projects have been proposed to deliver oil sands crudes to new markets over the next decade. It was concluded that the billions of dollars invested in oil sands in Alberta will contribute to the economic prosperity of the entire country. 11 figs

Effect of substrate size on sympatric sand darter benthic habitat preferences

Science.gov (United States)

Thompson, Patricia A.; Welsh, Stuart A.; Rizzo, Austin A.; Smith, Dustin M.

2017-01-01

The western sand darter, Ammocrypta clara, and the eastern sand darter, A. pellucida, are sand-dwelling fishes that have undergone range-wide population declines, presumably owing to habitat loss. Habitat use studies have been conducted for the eastern sand darter, but literature on the western sand darter remains sparse. To evaluate substrate selection and preference, western and eastern sand darters were collected from the Elk River, West Virginia, one of the few remaining rivers where both species occur sympatrically. In the laboratory, individuals were given the choice to bury into five equally available and randomly positioned substrates ranging from fine sand to granule gravel (0.12–4.0 mm). The western sand darter selected for coarse and medium sand, while the eastern sand darter was more of a generalist selecting for fine, medium, and coarse sand. Substrate selection was significantly different (p = 0.02) between species in the same environment, where the western sand darter preferred coarser substrate more often compared to the eastern sand darter. Habitat degradation is often a limiting factor for many species of rare freshwater fish, and results from this study suggest that western and eastern sand darters may respond differently to variations in benthic substrate composition.

Provenance and recycling of Arabian desert sand

Science.gov (United States)

Garzanti, Eduardo; Vermeesch, Pieter; Andò, Sergio; Vezzoli, Giovanni; Valagussa, Manuel; Allen, Kate; Kadi, Khalid A.; Al-Juboury, Ali I. A.

2013-05-01

This study seeks to determine the ultimate origin of aeolian sand in Arabian deserts by high-resolution petrographic and heavy-mineral techniques combined with zircon U-Pb geochronology. Point-counting is used here as the sole method by which unbiased volume percentages of heavy minerals can be obtained. A comprehensive analysis of river and wadi sands from the Red Sea to the Bitlis-Zagros orogen allowed us to characterize all potential sediment sources, and thus to quantitatively constrain provenance of Arabian dune fields. Two main types of aeolian sand can be distinguished. Quartzose sands with very poor heavy-mineral suites including zircon occupy most of the region comprising the Great Nafud and Rub' al-Khali Sand Seas, and are largely recycled from thick Lower Palaeozoic quartzarenites with very minor first-cycle contributions from Precambrian basement, Mesozoic carbonate rocks, or Neogene basalts. Instead, carbonaticlastic sands with richer lithic and heavy-mineral populations characterize coastal dunes bordering the Arabian Gulf from the Jafurah Sand Sea of Saudi Arabia to the United Arab Emirates. The similarity with detritus carried by the axial Tigris-Euphrates system and by transverse rivers draining carbonate rocks of the Zagros indicates that Arabian coastal dunes largely consist of far-travelled sand, deposited on the exposed floor of the Gulf during Pleistocene lowstands and blown inland by dominant Shamal northerly winds. A dataset of detrital zircon U-Pb ages measured on twelve dune samples and two Lower Palaeozoic sandstones yielded fourteen identical age spectra. The age distributions all show a major Neoproterozoic peak corresponding to the Pan-African magmatic and tectonic events by which the Arabian Shield was assembled, with minor late Palaeoproterozoic and Neoarchean peaks. A similar U-Pb signature characterizes also Jafurah dune sands, suggesting that zircons are dominantly derived from interior Arabia, possibly deflated from the Wadi al

A new early brachyuran (Crustacea, Decapoda) from the Middle Jurassic of northwest France, epibionts and ecological considerations

NARCIS (Netherlands)

Robin, N.; Bakel, van B.W.M.; Hondt, d' J.-L.; Charbonnier, S.

2015-01-01

The earliest known crabs are of Early and Middle Jurassic age; in general, they are rare. Here we describe a new species of homolodromioid from the late Bathonian of Sarthe (France), based on a single dorsal carapace, Tanidromites raboeufi n. sp. This specimen has mostly well-preserved cuticle, and

The Geodiversity in Drift Sand Landscapes of The Netherlands

Science.gov (United States)

van den Ancker, Hanneke; Jungerius, Pieter Dirk; Riksen, Michel

2015-04-01

The authors carried out detailed field studies of more than twelve drift sand landscapes in The Netherlands. The objective of these studies was to restore Natura-2000 values by restoring the wind activity. Active drift sands occur almost exclusively in The Netherlands, Natura 2000 habitat 2330 'Inland dunes with open Corynephorus and Agrostis grasslands', for which reason our country is largely responsible for this European landscape. Active drift sands had almost disappeared for two reasons: first, the stabilization of the drift sands by air pollution, mainly nitrogen, which stimulates the growth of algae and grasses that initiate soil formation, and second, by the growth of forests surrounding the sands, which decreases the wind force. The restoration studies revealed differences in the geodiversity between and within the drift sand areas. Whereas the drift sands on geological and soil maps show as almost homogenous areas, they have in fact highly variable geo-conditions of which examples will be given. These geodiversity aspects concern differences in geomorphological structure, origin, sediments and age of the drift sands. Differences in wind and water erosion, trampling and soil formation add to the geodiversity within the drift sand areas. Especially in the primary stages of succession the differences in geodiversity are relevant for the Natura-2000 values. We discerned three main types of active sands. Firstly, the impressive drift sands with large parabolic dune structures, often consisting of series of interlocking parabolic dunes. They developed from the northeast towards the southwest, against the direction of the dominant wind, and must have taken centuries to develop. Small parts of these systems are still active, other parts show different degrees of soil formation. Their origin is still unclear but probably dates from medieval times (Heidinga, 1985, Jungerius & Riksen, 2008). Second are the drift sand areas with irregular hills from 0.5 to about 2

Ultrastructural and ERG findings in progressive rod-cone dystrophy in a litter of Labrador retrievers.

Science.gov (United States)

Raitta, C; Kommonen, B; Ulshafer, R; Karhunen, U

1991-02-01

Early ultrastructural findings of a progressive photoreceptor dystrophy and corresponding ERG findings are reported in 3 Labrador Retrievers from a litter of 7 pups bred from 2 dogs clinically and electroretinographically affected with generalized progressive retinal dystrophy. The pups were euthanized at 5, 11 and 15 months post partum. The most prominent ultrastructural finding was photoreceptor dystrophy. At 5 months the outer nuclear layer (ONL) consisted of 8-10 layers and seemed reduced in thickness, pyknotic nuclei were seen in this layer. The receptor outer segments (OS) were short and swollen. Some disorientation of OS discs occurred. In the 11-months specimen 7-8 ONL layers were identified. Overall thinning of the neuro-retina had occurred and fewer receptors compared to the 5-months specimen were present. By 15 months the ONL was further reduced to about 4 layers. Enlarged internuclear spaces were present in the ONL as well as around inner segments (IS). Phagocytic cells were frequent among remains of OS. The pigment epithelium appeared normal. The dark adapted ERG b-wave amplitudes and photopic 30 Hz flicker responses were low in comparison to controls of the same breed, and decreased with age. The condition represents a progressive rod-cone dystrophy which shares similarities with primary receptor dystrophy in man such as retinitis pigmentosa.

Rise and demise of the Bahama-Grand Banks gigaplatform, northern margin of the Jurassic proto-Atlantic seaway

Science.gov (United States)

Poag, C. Wylie

1991-01-01

An extinct, > 5000-km-long Jurassic carbonate platform and barrier reef system lies buried beneath the Atlantic continental shelf and slope of the United States. A revised stratigraphic framework, a series of regional isopach maps, and paleogeographic reconstructions are used to illustrate the 42-m.y. history of this Bahama-Grand Banks gigaplatform from its inception in Aalenian(?) (early Middle Jurassic) time to its demise and burial in Berriasian-Valanginian time (early Early Cretaceous). Aggradation-progradation rates for the gigaplatform are comparable to those of the familiar Capitan shelf margin (Permian) and are closely correlated with volumetric rates of siliciclastic sediment accumulation and depocenter migration. Siliciclastic encroachment behind the carbonate tracts appears to have been an important impetus for shelf-edge progradation. During the Early Cretaceous, sea-level changes combined with eutrophication (due to landward soil development and seaward upwelling) and the presence of cooler upwelled waters along the outer shelf appear to have decimated the carbonate producers from the Carolina Trough to the Grand Banks. This allowed advancing siliciclastic deltas to overrun the shelf edge despite a notable reduction in siliciclastic accumulation rates. However, upwelling did not extend southward to the Blake-Bahama megabank, so platform carbonate production proceeded there well into the Cretaceous. Subsequent stepwise carbonate abatement characterized the Blake Plateau Basin, whereas the Bahamas have maintained production to the present. The demise of carbonate production on the northern segments of the gigaplatform helped to escalate deep-water carbonate deposition in the Early Cretaceous, but the sudden augmentation of deep-water carbonate reservoirs in the Late Jurassic was triggered by other agents, such as global expansion of nannoplankton communities. ?? 1991.

Bird-like anatomy, posture, and behavior revealed by an early jurassic theropod dinosaur resting trace

Science.gov (United States)

Milner, Andrew R.C.; Harris, J.D.; Lockley, M.G.; Kirkland, J.I.; Matthews, N.A.

2009-01-01

Background: Fossil tracks made by non-avian theropod dinosaurs commonly reflect the habitual bipedal stance retained in living birds. Only rarely-captured behaviors, such as crouching, might create impressions made by the hands. Such tracks provide valuable information concerning the often poorly understood functional morphology of the early theropod forelimb. Methodology/Principal Findings: Here we describe a well-preserved theropod trackway in a Lower Jurassic (???198 millionyear- old) lacustrine beach sandstone in the Whitmore Point Member of the Moenave Formation in southwestern Utah. The trackway consists of prints of typical morphology, intermittent tail drags and, unusually, traces made by the animal resting on the substrate in a posture very similar to modern birds. The resting trace includes symmetrical pes impressions and well-defined impressions made by both hands, the tail, and the ischial callosity. Conclusions/Significance: The manus impressions corroborate that early theropods, like later birds, held their palms facing medially, in contrast to manus prints previously attributed to theropods that have forward-pointing digits. Both the symmetrical resting posture and the medially-facing palms therefore evolved by the Early Jurassic, much earlier in the theropod lineage than previously recognized, and may characterize all theropods.

Structural complexity at and around the Triassic-Jurassic GSSP at Kuhjoch, Northern Calcareous Alps, Austria

Science.gov (United States)

Palotai, M.; Pálfy, J.; Sasvári, Á.

2017-10-01

One of the key requirements for a Global Stratotype Section and Point (GSSP) is the absence of tectonic disturbance. The GSSP for the Triassic-Jurassic system boundary was recently defined at Kuhjoch, Northern Calcareous Alps, Austria. New field observations in the area of the Triassic-Jurassic boundary GSSP site demonstrate that the overturned, tight, and almost upright Karwendel syncline was formed at semibrittle deformation conditions, confirmed by axial planar foliation. Tight to isoclinal folds at various scales were related to a tectonic transport to the north. Brittle faulting occurred before and after folding as confirmed by tilt tests (the rotation of structural data by the average bedding). Foliation is ubiquitous in the incompetent units, including the Kendlbach Formation at the GSSP. A reverse fault (inferred to be formed as a normal fault before folding) crosscuts the GSSP sections, results in the partial tectonic omission of the Schattwald Beds, and thus makes it impossible to measure a complete and continuous stratigraphic section across the whole Kendlbach Formation. Based on these observations, the Kuhjoch sections do not fulfil the specific requirement for a GSSP regarding the absence of tectonic disturbances near boundary level.

Bird-like anatomy, posture, and behavior revealed by an early jurassic theropod dinosaur resting trace.

Science.gov (United States)

Milner, Andrew R C; Harris, Jerald D; Lockley, Martin G; Kirkland, James I; Matthews, Neffra A

2009-01-01

Fossil tracks made by non-avian theropod dinosaurs commonly reflect the habitual bipedal stance retained in living birds. Only rarely-captured behaviors, such as crouching, might create impressions made by the hands. Such tracks provide valuable information concerning the often poorly understood functional morphology of the early theropod forelimb. Here we describe a well-preserved theropod trackway in a Lower Jurassic ( approximately 198 million-year-old) lacustrine beach sandstone in the Whitmore Point Member of the Moenave Formation in southwestern Utah. The trackway consists of prints of typical morphology, intermittent tail drags and, unusually, traces made by the animal resting on the substrate in a posture very similar to modern birds. The resting trace includes symmetrical pes impressions and well-defined impressions made by both hands, the tail, and the ischial callosity. The manus impressions corroborate that early theropods, like later birds, held their palms facing medially, in contrast to manus prints previously attributed to theropods that have forward-pointing digits. Both the symmetrical resting posture and the medially-facing palms therefore evolved by the Early Jurassic, much earlier in the theropod lineage than previously recognized, and may characterize all theropods.

Experimental investigation of sanding propensity for the Andrew completion

Energy Technology Data Exchange (ETDEWEB)

Venkitaraman, A.; Li, H. [Schlumberger Perforating and Testing Center (United Kingdom); Leonard, A. J.; Bowden, P. R. [BP Exploration (United Kingdom)

1998-12-31

A series of laboratory experiments were performed on three reservoir core samples selected from two plot wells to confirm the likelihood of sand production during the completion phase of the planned Andrew horizontal wells, and to perform risk analysis of formation failure at the time of underbalance perforation, and expected producing conditions. CT scans revealed no perforation failure, and the core samples did not show any propensity to produce sand during single-phase oil flow. Transient sand production was observed when water cut was introduced, but sand production declined as the percentage of water cut was increased. There was no evidence of sand production in the core samples during depletion testing either, and the wells were subsequently completed with perforated cemented liners without sand control. No sand problems have been encountered in two years of production, with some wells in water cut and declined reservoir pressure of 200 psi. 8 refs., 3 tabs., 5 figs.

Evaluation of wettability of binders used in moulding sands

Directory of Open Access Journals (Sweden)

Hutera B.

2007-01-01

Full Text Available Binders used in moulding sand have the differential properties. One of the main parameters influencing on moulding sand properties is wettability of the sand grain by binding material. In the article some problems concerned with wettability evaluation have been presented and the importance of this parameter for quantity description of process occurring in system: binder- sand grain has been mentioned. The procedure of wetting angle measurement and operation of prototype apparatus for wettability investigation of different binders used in moulding sand have been described, as well as the results of wetting angle measurement for different binders at different conditions. The addition of little amount of proper diluent to binder results in the state of equilibrium reached almost immediately. Such addition can also reduce the value of equilibrium contact angle. The uniform distribution of binder on the surface of the sand grains and reducing of the required mixing time can be obtained. It has also a positive effect on the moulding sand strength.

Nuclear energy in the oils sands

International Nuclear Information System (INIS)

Arsenault, J.E.

2014-01-01

The major Canadian oil sands are located in Alberta and Saskatchewan, with most production from the strata along the Athabasca River in Alberta. The economically recoverable oil sands reserves are estimated to be 168 billion barrels which at a current production rate of 1.8 million barrels per day (2012), are projected to last a very long time. Canada has been blessed with vast energy resources which make it potentially energy-independent and able to provide significant exports but there are concerns that their development cannot be managed in a wholly acceptable manner. Comparable concerns have been applied to nuclear energy in the past and in recent times to the oil sands. The technologies associated with these energy sources have always been controversial because they are at the confluence of economics and politics where finding a balance between risk and reward is difficult. So it should be no surprise that when these technologies get linked together in certain proposals their prospect for success is doubly difficult. The possible use of nuclear energy for production of oil from the oil sands dates back to the late 1950s, when an experiment to mine the oil by detonating an underground nuclear device was proposed. It was predicted that the heat and pressure released from such a device would create a large cavern into which oil would flow, and from where it would be pumped to the surface. Almost at the same time, oil sands research using conventional sources of energy had culminated with the development of practical refining processes, essentially those still in use today. These methods require large amounts of heat energy in the form of hot water and steam. In this century nuclear energy was proposed as the source for the heat required by the oil sands production processes. To date neither of these nuclear proposals for oil sands projects have been successful, because the economic and political balance could not be struck. (author)

The provenance of Taklamakan desert sand

Science.gov (United States)

Rittner, Martin; Vermeesch, Pieter; Carter, Andrew; Bird, Anna; Stevens, Thomas; Garzanti, Eduardo; Andò, Sergio; Vezzoli, Giovanni; Dutt, Ripul; Xu, Zhiwei; Lu, Huayu

2016-03-01

Sand migration in the vast Taklamakan desert within the Tarim Basin (Xinjiang Uyghur Autonomous region, PR China) is governed by two competing transport agents: wind and water, which work in diametrically opposed directions. Net aeolian transport is from northeast to south, while fluvial transport occurs from the south to the north and then west to east at the northern rim, due to a gradual northward slope of the underlying topography. We here present the first comprehensive provenance study of Taklamakan desert sand with the aim to characterise the interplay of these two transport mechanisms and their roles in the formation of the sand sea, and to consider the potential of the Tarim Basin as a contributing source to the Chinese Loess Plateau (CLP). Our dataset comprises 39 aeolian and fluvial samples, which were characterised by detrital-zircon U-Pb geochronology, heavy-mineral, and bulk-petrography analyses. Although the inter-sample differences of all three datasets are subtle, a multivariate statistical analysis using multidimensional scaling (MDS) clearly shows that Tarim desert sand is most similar in composition to rivers draining the Kunlun Shan (south) and the Pamirs (west), and is distinctly different from sediment sources in the Tian Shan (north). A small set of samples from the Junggar Basin (north of the Tian Shan) yields different detrital compositions and age spectra than anywhere in the Tarim Basin, indicating that aeolian sediment exchange between the two basins is minimal. Although river transport dominates delivery of sand into the Tarim Basin, wind remobilises and reworks the sediment in the central sand sea. Characteristic signatures of main rivers can be traced from entrance into the basin to the terminus of the Tarim River, and those crossing the desert from the south to north can seasonally bypass sediment through the sand sea. Smaller ephemeral rivers from the Kunlun Shan end in the desert and discharge their sediment there. Both river run

Nuclear energy in the oils sands

Energy Technology Data Exchange (ETDEWEB)

Arsenault, J.E.

2014-09-15

The major Canadian oil sands are located in Alberta and Saskatchewan, with most production from the strata along the Athabasca River in Alberta. The economically recoverable oil sands reserves are estimated to be 168 billion barrels which at a current production rate of 1.8 million barrels per day (2012), are projected to last a very long time. Canada has been blessed with vast energy resources which make it potentially energy-independent and able to provide significant exports but there are concerns that their development cannot be managed in a wholly acceptable manner. Comparable concerns have been applied to nuclear energy in the past and in recent times to the oil sands. The technologies associated with these energy sources have always been controversial because they are at the confluence of economics and politics where finding a balance between risk and reward is difficult. So it should be no surprise that when these technologies get linked together in certain proposals their prospect for success is doubly difficult. The possible use of nuclear energy for production of oil from the oil sands dates back to the late 1950s, when an experiment to mine the oil by detonating an underground nuclear device was proposed. It was predicted that the heat and pressure released from such a device would create a large cavern into which oil would flow, and from where it would be pumped to the surface. Almost at the same time, oil sands research using conventional sources of energy had culminated with the development of practical refining processes, essentially those still in use today. These methods require large amounts of heat energy in the form of hot water and steam. In this century nuclear energy was proposed as the source for the heat required by the oil sands production processes. To date neither of these nuclear proposals for oil sands projects have been successful, because the economic and political balance could not be struck. (author)

Sediment Source Fingerprinting of the Lake Urmia Sand Dunes.

Science.gov (United States)

Ahmady-Birgani, Hesam; Agahi, Edris; Ahmadi, Seyed Javad; Erfanian, Mahdi

2018-01-09

Aeolian sand dunes are continuously being discovered in inner dry lands and coastal areas, most of which have been formed over the Last Glacial Maximum. Presently, due to some natural and anthropogenic implications on earth, newly-born sand dunes are quickly emerging. Lake Urmia, the world's second largest permanent hypersaline lake, has started shrinking, vast lands comprising sand dunes over the western shore of the lake have appeared and one question has been playing on the minds of nearby dwellers: where are these sand dunes coming from, What there was not 15 years ago!! In the present study, the determination of the source of the Lake Urmia sand dunes in terms of the quantifying relative contribution of each upstream geomorphological/lithological unit has been performed using geochemical fingerprinting techniques. The findings demonstrate that the alluvial and the fluvial sediments of the western upstream catchment have been transported by water erosion and they accumulated in the lower reaches of the Kahriz River. Wind erosion, as a secondary agent, have carried the aeolian sand-sized sediments to the sand dune area. Hence, the Lake Urmia sand dunes have been originating from simultaneous and joint actions of alluvial, fluvial and aeolian processes.

First Jurassic grasshopper (Insecta, Caelifera) from China.

Science.gov (United States)

Gu, Jun-Jie; Yue, Yanli; Shi, Fuming; Tian, He; Ren, Dong

2016-09-20

Orthoptera is divided into two suborders, the Ensifera (katydids, crickets and mole crickets) and the Caelifera (grasshoppers and pygmy mole crickets). The earliest definitive caeliferans are those found in the Triassic (Bethoux & Ross 2005). The extinct caeliferan families, such as Locustopsidae and Locustavidae, may prove to be stem groups to some of the modern superfamilies (Grimaldi & Engel 2005). Locustopsidae is known from the Late Triassic or Early Jurassic to Late Cretaceous, consisting of two subfamilies (Gorochov et al. 2006). They are recorded from Europe, England, Russia, central Asia, China, Egypt, North America, Brazil and Australia. Up to now, Late Mesozoic fossil deposits of China has been reported plenty taxa of orthopterids, e.g. ensiferans, phasmatodeans, grylloblattids (Cui et al. 2012; Gu et al. 2010; Gu et al. 2012a; Gu et al. 2012b; Ren et al. 2012; Wang et al. 2014); but, with few caeliferans records, only four species, Pseudoacrida costata Lin 1982, Mesolocustopsis sinica Hong 1990, Tachacris stenosis Lin 1977 and T. turgis Lin 1980, were reported from the Early Cretaceous of Ningxia, Shandong, Yunnan and Zhejiang of China.

The taphonomy of dinosaurs from the Upper Jurassic of Tendaguru (Tanzania based on field sketches of the German tendaguru expedition (1909–1913

Directory of Open Access Journals (Sweden)

W.-D. Heinrich

1999-01-01

Full Text Available Tendaguru is one of the most important dinosaur localities in Africa. The Tendaguru Beds have produced a diverse Late Jurassic (Kimmeridgian to Tithonian dinosaur assemblage, including sauropods (Brachiosaurus, Barosaurus, Dicraeosaurus, Janenschia, theropods (e.g., Elaphrosaurus, Ceratosaurus, Allosaurus, and ornithischians (Kentrosaurus, Dryosaurus. Contrary to the well studied skeletal anatomy of the Tendaguru dinosaurs, the available taphonomic information is rather limited, and a generally accepted taphonomic model has not yet been established. Assessment of unpublished excavation sketches by the German Tendaguru expedition (1909–1913 document bone assemblages of sauropod and ornithischian dinosaurs from the Middle Saurian Bed, Upper Saurian Bed, and the Transitional Sands above the Trigonia smeei Bed, and shed some light on the taphonomy of the Tendaguru dinosaurs. Stages of disarticulation range from incomplete skeletons to solitary bones, and strongly argue for carcass decay and post-mortem transport prior to burial. The sauropod bone accumulations are dominated by adult individuals, and juveniles are rare or missing. The occurrence of bones in different superimposed dinosaur-bearing horizons indicates that skeletal remains were accumulated over a long time span during the Late Jurassic, and the majority of the bone accumulations are probably attritional. These accumulations are likely to have resulted from long-term bone imput due to normal mortality events caused by starvation, seasonal drought, disease, old age and weakness. The depositional environment of the Middle and Upper Saurian Bed was mainly limnic to brackish in origin, while the palaeoenvironment of the Transitional Sands was marginal marine. Tendaguru zählt zu den bedeutendsten Dinosaurier-Lagerstätten Afrikas. Aus den Tendaguru-Schichten sind zahlreiche Skelettreste von Sauropoden (Brachiosaurus, Barosaurus, Dicraeosaurus, Janenschia, Theropoden (z.B. Elaphrosaurus

Changes in active eolian sand at northern Coachella Valley, California

Science.gov (United States)

Katra, Itzhak; Scheidt, Stephen; Lancaster, Nicholas

2009-04-01

Climate variability and rapid urbanization have influenced the sand environments in the northern Coachella Valley throughout the late 20th century. This paper addresses changes in the spatial relationships among different sand deposits at northern Coachella Valley between two recent time periods by using satellite data acquired from the Advanced Spaceborne Thermal Emission and Reflection Radiometer (ASTER). The approach employed here, involving multispectral thermal infrared (TIR) data and spectral mixture analysis, has shown that the major sand deposits can be spatially modeled at northern Coachella Valley. The "coarse-grained (quartz-rich) sand" deposit is associated with active eolian sand, and the "mixed sandy soil" and "fine-grained (quartz-rich) sand" deposits are associated with inactive eolian sand. The fractional abundance images showed a significant decrease between 2000 and 2006 in the percentage of active sand in the major depositional area for fluvial sediment, the Whitewater River, but also in two downwind areas: the Whitewater and Willow Hole Reserves. The pattern of the active sand appears to be related to variations in annual precipitation (wet and dry years) and river discharge in the northern Coachella Valley. We suggest here that recent human modifications to the major watercourses that supply sand affect the capability of fluvial deposition areas to restore sediments over time and consequently the responses of the sand transport system to climate change, becoming more sensitive to dry years where areas of active sand may shrink, degrade, and/or stabilize faster. The approach utilized in this study can be advantageous for future monitoring of sand in the northern Coachella Valley for management of these and similar environments.

Namibia : triaxial test on sand

DEFF Research Database (Denmark)

Steenfelt, Jørgen S.; Jacobsen, Kim P.

In connection with a harbour project the friction angle of a fine sand is required. On Friday 13 March 1998 the Danish Geotechnical Institute (DGI) delivered app. 2.5 kg sand for testing at the Geotechnical Engineering Laboratory, Aalborg University. The present Data Report summarises the results...... of two CID, isotropically consolidated, drained triaxial tests carried out according to the instructions in DG1 letter dated 13 March 1998....

Pattern formation - Instabilities in sand ripples

DEFF Research Database (Denmark)

Hansen, J. L.; v. Hecke, M.; Haaning, A.

2001-01-01

Sand ripples are seen below shallow wavy water and are formed whenever water oscillates over a bed of sand. Here we analyse the instabilities that can upset this perfect patterning when the ripples are subjected to large changes in driving amplitude or frequency, causing them to deform both...

Southeast Florida Sediment Assessment and Needs Determination (SAND) Study

Science.gov (United States)

2014-09-01

sand with some shell beds, sandstone , and limestone *Miami Limestone 0 to 80 ft Oolitic limestone, quartz sand, and sandstone Anastasia 0 to 100 ft...Sand, shell beds, marl, calcareous sandstone (coquina/calcarenite) Fort Thompson 0 to 80 ft Silty limestone, silty sand, clayey marl, shell marl...highly- to moderately- weathered quartzose sandstone , and highly-weathered (saprolitic) to moderately-weathered hard limestone. North-south and

Modelling the behavior of an oil saturated sand

International Nuclear Information System (INIS)

Evgin, E.; Altaee, A.; Lord, S.; Konuk, I.

1990-01-01

The experiments carried out in an earlier study show the oil contamination affects the strength and deformation characteristics of a crushed quartz sand. In the present study, a mathematical soil model is used to simulate the mechanical behavior of the same sand. The model parameters are determined for both clean and oil contaminated soil. Simulations are made for the stress-strain behavior of the soil in drained and undrained conventional traixial compression tests. In order to illustrate the effect of changes in the soil properties on the behavior of an engineering structure, a finite element analysis is carried out. In this paper comparative results are presented to show the differences in the behavior of a foundation resting on a clean sand, on an oil contaminated sand, and on a sand contaminated locally

Oblique second-order sand transport pathways on an intertidal sand flat in a natural tidal inlet system

DEFF Research Database (Denmark)

Ernstsen, Verner Brandbyge; Lefebvre, Alice; Kroon, Aart

2013-01-01

tide, sand is transported along ESE-oriented pathways across the intertidal flat towards the inner tidal basin. During the late stages of ebb tide, sand is transported in drainage channels (WSWoriented) from the intertidal flat towards the inlet channel. During storm events with winds from SW, wave...

Oil sands supply outlook

International Nuclear Information System (INIS)

Dunbar, R.

2004-01-01

In March 2004, The Canadian Energy Research Institute released a report on the expected future supply from Alberta's oil sands. The report indicates that the future for the already well-established oil sands industry is promising, particularly given the outlook for oil prices. The challenges facing the industry include higher industry supply costs and the need for innovative commercial and technological solutions to address the risks of irregularities and changes in crude oil prices. In 2003, the industry produced 874 thousand barrels per day of synthetic crude oil and unprocessed crude bitumen. This represents 35 per cent of Canada's total oil production. Current production capacity has increased to 1.0 million barrels per day (mbpd) due to new projects. This number may increase to 3.5 mbpd by 2017. Some new projects may be deferred due to the higher raw bitumen and synthetic crude oil supply costs. This presentation provided supply costs for a range of oil sands recovery technologies and production projections under various business scenarios. tabs., figs

Gasification of oil sand coke: review

Energy Technology Data Exchange (ETDEWEB)

Furimsky, E. [IMAF Group, Ottawa, ON (Canada)

1998-08-01

The production of synthetic crude from the tar sands in Western Canada has been steadily increasing. Most of the delayed coke produced by Suncor is combusted on site, whereas all fluid coke produced by Syncrude is stockpiled.The database on the chemical and physical properties of the oil sand coke, including the composition and fusion properties of the mineral matter, has been established. The reactivity of the coke was determined by oxygen chemisorption, fixed bed and fluid bed bench scale gasification and pilot plant gasification. The reactivity of the oil sand coke for gasification is rather low and comparable to high rank coals, such as anthracite. Slurrability tests revealed that a solid concentration in water, approaching 70 wt%, can be achieved. Gasification is the front runner among clean technologies for the conversion of carbonaceous solids to useful products. Several commercial gasifiers are available to cover the wide range of severity. Because of the low reactivity of oil sands coke, high severity conditions are required to achieve high gasification conversion. Such conditions can be attained in entrained bed gasifiers. Gasifiers employing both dry and slurry feeding systems are suitable. A high efficiency, low SO{sub x} and NO{sub x} emissions, as well as a low solid waste production are among the key advantages of the gasification technology compared with thecompeting technologies. Commercial gasification of oil sands coke is delayed because of the availability of natural gas on the site of the upgrading plants. Potential for the transportation of the oil sand coke to USA for electricity generation using the integrated gasification combined-cycle (IGCC) technology was evaluated. 27 refs., 17 figs., 9 tabs.

Reuse of waste cutting sand at Lawrence Livermore National Laboratory

International Nuclear Information System (INIS)

Mathews, S.; Wilson, K.

1998-01-01

Lawrence Livermore National Laboratory (LLNL) examined the waste stream from a water jet cutting operation, to evaluate the possible reuse of waste garnet sand. The sand is a cutting agent used to shape a variety of materials, including metals. Nearly 70,000 pounds of waste sand is generated annually by the cutting operation. The Environmental Protection Department evaluated two potential reuses for the spent garnet sand: backfill in utility trenches; and as a concrete constituent. In both applications, garnet waste would replace the sand formerly purchased by LLNL for these purposes. Findings supported the reuse of waste garnet sand in concrete, but disqualified its proposed application as trench backfill. Waste sand stabilized in a concrete matrix appeared to present no metals-leaching hazard; however, unconsolidated sand in trenches could potentially leach metals in concentrations high enough to threaten ground water quality. A technical report submitted to the San Francisco Bay Regional Water Quality Control Board was reviewed and accepted by that body. Reuse of waste garnet cutting sand as a constituent in concrete poured to form walkways and patios at LLNL was approved

Augmenting Sand Simulation Environments through Subdivision and Particle Refinement

Science.gov (United States)

Clothier, M.; Bailey, M.

2012-12-01

Recent advances in computer graphics and parallel processing hardware have provided disciplines with new methods to evaluate and visualize data. These advances have proven useful for earth and planetary scientists as many researchers are using this hardware to process large amounts of data for analysis. As such, this has provided opportunities for collaboration between computer graphics and the earth sciences. Through collaboration with the Oregon Space Grant and IGERT Ecosystem Informatics programs, we are investigating techniques for simulating the behavior of sand. We are also collaborating with the Jet Propulsion Laboratory's (JPL) DARTS Lab to exchange ideas and gain feedback on our research. The DARTS Lab specializes in simulation of planetary vehicles, such as the Mars rovers. Their simulations utilize a virtual "sand box" to test how a planetary vehicle responds to different environments. Our research builds upon this idea to create a sand simulation framework so that planetary environments, such as the harsh, sandy regions on Mars, are more fully realized. More specifically, we are focusing our research on the interaction between a planetary vehicle, such as a rover, and the sand beneath it, providing further insight into its performance. Unfortunately, this can be a computationally complex problem, especially if trying to represent the enormous quantities of sand particles interacting with each other. However, through the use of high-performance computing, we have developed a technique to subdivide areas of actively participating sand regions across a large landscape. Similar to a Level of Detail (LOD) technique, we only subdivide regions of a landscape where sand particles are actively participating with another object. While the sand is within this subdivision window and moves closer to the surface of the interacting object, the sand region subdivides into smaller regions until individual sand particles are left at the surface. As an example, let's say

Understanding Colombian Amazonian white sand forests

NARCIS (Netherlands)

Peñuela-Mora, M.C.

2014-01-01

Although progress has been made in studies on white sand forests in the Amazon, there is still a considerable gap in our knowledge of the unique species composition of white sand forests and their structure and dynamics, especially in Western Amazon. This thesis aims to fill this gap by addressing

Two-phase southward subduction of the Mongol-Okhotsk oceanic plate constrained by Permian-Jurassic granitoids in the Erguna and Xing'an massifs (NE China)

Science.gov (United States)

Liu, Huichuan; Li, Yinglei; He, Hongyun; Huangfu, Pengpeng; Liu, Yongzheng

2018-04-01

Geodynamics of the Mongol-Okhotsk oceanic plate southward subduction are still pending problems. This paper presents new zircon LA-ICP-MS U-Pb age and whole-rock geochemical data for the middle Permian to Middle Jurassic granitoids in the western Erguna and central Xing'an massifs. 267-264 Ma, 241 Ma and 173 Ma I-type granites, and 216 Ma A-type granites were identified in the Erguna and Xing'an massifs (NE China). The I-type granites were produced by partial melting of the lower mafic crust. The 216 Ma A-type granites were derived from partial melting of crustal materials with tonalitic to granodioritic compositions. The 267-264 Ma and 241 Ma I-type granites were generated in an Andean-type arc setting, wheras the 216 Ma A-type and 173 Ma granites were formed in supra subduction extensional setting. We summarized previous age data of the middle Permian to Middle Jurassic magmtaic rocks in the Erguna and Xing'an Massifs and identified two isolated phases of magmatic activity including the ca. 267-225 Ma and ca. 215-165 Ma periods, with a significant magmatic gap at ca. 225-215 Ma. These middle Permian to Middle Jurassic magmatic rocks are closely related to the southward subduction of the Mongol-Okhotsk ocean. A two-stage tectonic evolutionary model was proposed to account for these geological observations in the Erguna and Xing'an massifs, involving Permian to Middle Triassic continuous southward subduction of the Mongol-Okhotsk oceanic plate and Late Triassic to Jurassic slab-rollback and supra subduction extension.

Crestal unconformities on an exposed Jurassic tilted fault block, Wollaston Forland, East Greenland as an analogue for buried hydrocarbon traps

DEFF Research Database (Denmark)

Surlyk, Finn; Korstgård, J.

2013-01-01

The stratigraphy of successions exposed in footwall crests of tilted fault blocks is commonly highly complex. Crestal stratigraphy and structure are particularly difficult to unravel in the subsurface due to poor seismic resolution across fault zones, footwall collapse, and coalescing syn- and post......-rift unconformities. Crestal ridges are important elements in basin evolution, as they form drainage divides and sediment sources for aprons along footwall scarps and hangingwall deltas. A Middle Jurassic – lowermost Cretaceous footwall crest is exceptionally well exposed in the mountain Stratumbjerg in Wollaston...... Forland, East Greenland. Rifting and block tilting was initiated in the (?)Bajocian, intensified in the Oxfordian–Kimmeridgian, culminated in latest Jurassic, Volgian, time and faded out in the earliest Cretaceous. The main border faults of the westward tilted blocks trend roughly N–S. The first early syn...

Computational analysis of the effects of the hERG channel opener NS1643 in a human ventricular cell model

DEFF Research Database (Denmark)

Peitersen, Torben; Grunnet, Morten; Benson, Alan P

2008-01-01

BACKGROUND: Dysfunction or pharmacologic inhibition of repolarizing cardiac ionic currents can lead to fatal arrhythmias. The hERG potassium channel underlies the repolarizing current I(Kr), and mutations therein can produce both long and short QT syndromes (LQT2 and SQT1). We previously reported...

Trajectories of saltating sand particles behind a porous fence

Science.gov (United States)

Zhang, Ning; Lee, Sang Joon; Chen, Ting-Guo

2015-01-01

Trajectories of aeolian sand particles behind a porous wind fence embedded in a simulated atmospheric boundary layer were visualized experimentally, to investigate the shelter effect of the fence on sand saltation. Two sand samples, one collected from a beach (d = 250 μm) and the other from a desert (d = 100 μm), were tested in comparison with the previous studies of a 'no-fence' case. A wind fence (ε = 38.5%) was installed on a flat sand bed filled with each sand sample. A high-speed photography technique and the particle tracking velocimetry (PTV) method were employed to reconstruct the trajectories of particles saltating behind the fence. The collision processes of these sand particles were analyzed, momentum and kinetic energy transfer between saltating particles and ground surface were also investigated. In the wake region, probability density distributions of the impact velocities agree well with the pattern of no-fence case, and can be explained by a log-normal law. The horizontal component of impact velocity for the beach sand is decreased by about 54%, and about 76% for the desert sand. Vertical restitution coefficients of bouncing particles are smaller than 1.0 due to the presence of the wind fence. The saltating particles lose a large proportion of their energy during the collision process. These results illustrate that the porous wind fence effectively abates the further evolution of saltating sand particles.

A jurassic-cretaceous dolerite dike from Sri Lanka

International Nuclear Information System (INIS)

Yoshida, M.; Vitanage, P.W.

1989-01-01

A dolerite dike from southwestern Sri Lanka gave whole-rock K-Ar ages of 152.6 ± 7.6 Ma and 143.3 ± 7.2 Ma. Many of the other dolerite dikes of Sri Lanka are considered to be of Mesozoic ages judging from the present age data and tectonometamorphic history of Sri Lanka. Petrographic similarities should not be used for age correlations, because dolerites of different age may have the same petrography. Preliminary natural remanent magnetization (NRM) after AF and thermal demagnetization gave a mean inclination of 24.6deg and declination of 67.5deg with α95=21.7deg. A virtual geomagnetic pole position calculated from the mean NRM was rotated relative to Antarctica so as to fit with that obtained from the Jurassic Ferrar dolerite of Antarctica. This rotation results in the location and attitude of Sri Lanka to attach with Antarctica at Lutzow-Holm Bay as suggested by Barron et al. (1978). (author). 18 refs

Biodegradable materials as binders for IVth generation moulding sands

OpenAIRE

K. Major-Gabry

2015-01-01

This paper focuses on the possibility of using the biodegradable materials as binders (or parts of binders?compositions) for foundry moulding and core sands. Results showed that there is a great possibility of using available biodegradable materials as foundry moulding sand binders. Using biodegradable materials as partial content of new binders, or additives to moulding sands may not only decrease the toxicity and increase reclamation ability of tested moulding sands, but also accelerate the...

Thermo-mechanical Properties of Upper Jurassic (Malm) Carbonate Rock Under Drained Conditions

Science.gov (United States)

Pei, Liang; Blöcher, Guido; Milsch, Harald; Zimmermann, Günter; Sass, Ingo; Huenges, Ernst

2018-01-01

The present study aims to quantify the thermo-mechanical properties of Neuburger Bankkalk limestone, an outcrop analog of the Upper Jurassic carbonate formation (Germany), and to provide a reference for reservoir rock deformation within future enhanced geothermal systems located in the Southern German Molasse Basin. Experiments deriving the drained bulk compressibility C were performed by cycling confining pressure p c between 2 and 50 MPa at a constant pore pressure p p of 0.5 MPa after heating the samples to defined temperatures between 30 and 90 °C. Creep strain was then measured after each loading and unloading stage, and permeability k was obtained after each creep strain measurement. The drained bulk compressibility increased with increasing temperature and decreased with increasing differential pressure p d = p c - p p showing hysteresis between the loading and unloading stages above 30 °C. The apparent values of the indirectly calculated Biot coefficient α ind containing contributions from inelastic deformation displayed the same temperature and pressure dependencies. The permeability k increased immediately after heating and the creep rates were also temperature dependent. It is inferred that the alteration of the void space caused by temperature changes leads to the variation of rock properties measured under isothermal conditions while the load cycles applied under isothermal conditions yield additional changes in pore space microstructure. The experimental results were applied to a geothermal fluid production scenario to constrain drawdown and time-dependent effects on the reservoir, overall, to provide a reference for the hydromechanical behavior of geothermal systems in carbonate, and more specifically, in Upper Jurassic lithologies.

Analysis on the geological features and ore-forming conditions at the southern margin of Erdos basin

International Nuclear Information System (INIS)

Ren Zhongxian; Shen Pingxi; Chen Fenling

2014-01-01

At the southern margin of Erdos basin, the paleo-interlayer-oxidation was developed in the medium-coarse-grained sandstone of Middle Jurassic System. High content uranium was enriched which are favorable for sandstone-type uranium deposit. There had been found multiple sandstone-type uranium deposits (ore occurrences) in this area. Uranium mineralization occurs in the sand body of braided fluvial facies in the lower member of Zhiluo Formation of Middle Jurassic System. It was controlled by the paleo-interlayer-oxidation. Uranium mineralization was closely related with the permeability of sandstone and occurs generally in the sandstones where is loose cementation and water permeability better. The stratum of Middle Jurassic System was extensively developed in the work area. Therefore it has great prospecting potential for the sandstone-type uranium deposit. (authors)