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Sample records for hybridization experiments revealed

  1. The City's new hybrid experience spaces

    DEFF Research Database (Denmark)

    Andersson, Lasse; Kiib, Hans

    2007-01-01

    .  We argue that " hybrid economy" and "hybrid space" can be understood as a linkage of "a traditional economy" to a new "experience economy", as well as  a merging of  "traditional private urban spaces" with "new types of public domains". This coupling is the departure point for the mental movement...... from an industrial mindset towards a new pragmatic philosophy in the development of our cities, cities based on knowledge and culture. The term "hybrid urban spaces" breaks down the traditional division between public and private and seeks to choreograph the city as the space of experience which both...... is to understand the notion of creative alliances between cultural institutions and business life as a basis for new urban development - the city's new hybrid experience spaces....

  2. Hybrid Experience Space for Cultural Heritage Communication

    DEFF Research Database (Denmark)

    Veirum, Niels Einar; Christensen, Mogens Fiil; Mayerhofer, Mikkel

    2006-01-01

    by daily use of experience products like computer-games, IMAX cinemas and theme parks featuring virtual reality installations. “It’s a question of stone-axe displays versus Disney-power installations” as one of the involved museum professionals point it, “but we don’t want any of these possibilities......”. The paper presents an actual experience design case in Zea Harbour, Greece dealing with these challenges using hybrid experience space communicating cultural heritage material. Ar-chaeological findings, physical reconstructions and digital models are mixed to effec-tively stage the interactive experience...... space. The Zea Case is a design scenario for the Museum of the Future showing how Cultural Heritage institutions can reinvent the rela-tion to the visitor and the neighbourhood. While Hybrid Experience Space can be used for Cultural Heritage Communication in traditional exhibitions we have reached...

  3. The City's new hybrid experience spaces

    DEFF Research Database (Denmark)

    Andersson, Lasse; Kiib, Hans

    2007-01-01

    from an industrial mindset towards a new pragmatic philosophy in the development of our cities, cities based on knowledge and culture. The term "hybrid urban spaces" breaks down the traditional division between public and private and seeks to choreograph the city as the space of experience which both...

  4. Lower Hybrid antennas for nuclear fusion experiments

    CERN Document Server

    Hillairet, Julien; Bae, Young-Soon; Bai, X; Balorin, C; Baranov, Y; Basiuk, V; Bécoulet, A; Belo, J; Berger-By, G; Brémond, S; Castaldo, C; Ceccuzzi, S; Cesario, R; Corbel, E; Courtois, X; Decker, J; Delmas, E; Delpech, L; Ding, X; Douai, D; Ekedahl, A; Goletto, C; Goniche, M; Guilhem, D; Hertout, P; Imbeaux, F; Litaudon, X; Magne, R; Mailloux, J; Mazon, D; Mirizzi, F; Mollard, P; Moreau, P; Oosako, T; Petrzilka, V; Peysson, Y; Poli, S; Preynas, M; Prou, M; Saint-Laurent, F; Samaille, F; Saoutic, B

    2015-01-01

    The nuclear fusion research goal is to demonstrate the feasibility of fusion power for peaceful purposes. In order to achieve the conditions similar to those expected in an electricity-generating fusion power plant, plasmas with a temperature of several hundreds of millions of degrees must be generated and sustained for long periods. For this purpose, RF antennas delivering multi-megawatts of power to magnetized confined plasma are commonly used in experimental tokamaks. In the gigahertz range of frequencies, high power phased arrays known as "Lower Hybrid" (LH) antennas are used to extend the plasma duration. This paper reviews some of the technological aspects of the LH antennas used in the Tore Supra tokamak and presents the current design of a proposed 20 MW LH system for the international experiment ITER.

  5. Forty Years' Development of Hybrid Rice:China's Experience

    Institute of Scientific and Technical Information of China (English)

    SUN Liang-xian; CHENG Shi-hua; DONG Hai-tao; CAO Li-yong; LI De-bao; YANG Shi-hua; ZHAI Hu-qu

    2004-01-01

    China is the first country where heterosis of hybrid rice was successfully exploited commercially on a large scale in the world. Hybrid rice has been developed for 40 years since Prof. Yuan initiated it in China. It had been planted about 330 million hectares with an increase of nearly 400 million tons of rice during 1976-2002. China's experience on hybrid rice could be attributed to utilization of various cytoplasmic male sterility (CMS) resources, high outcrossing rate CMS lines and stable environmentally induced genetic male sterile (EGMS) lines, improvement of diseases resistance and grain quality, and combination of ideal plant type with heterosis in hybrid rice breeding program. Innovative breeding techniques, e.g. improvement in root system, molecular marker-assisted selection and wild hybridization should be considered in further development of hybrid rice in China.

  6. Hybrid Rocket Experiment Station for Capstone Design

    Science.gov (United States)

    Conley, Edgar; Hull, Bethanne J.

    2012-01-01

    Portable hybrid rocket motors and test stands can be seen in many papers but none have been reported on the design or instrumentation at such a small magnitude. The design of this hybrid rocket and test stand is to be small and portable (suitcase size). This basic apparatus will be used for demonstrations in rocket propulsion. The design had to include all of the needed hardware to operate the hybrid rocket unit (with the exception of the external Oxygen tank). The design of this project includes making the correlation between the rocket's thrust and its size, the appropriate transducers (physical size, resolution, range, and cost), compatability with a laptop analog card, the ease of setup, and its portability.

  7. Chromosomal imbalances revealed in primary rhabdomyosarcomas by comparative genomic hybridization

    Institute of Scientific and Technical Information of China (English)

    LI Qiao-xin; LIU Chun-xia; CHUN Cai-pu; QI Yan; CHANG Bin; LI Xin-xia; CHEN Yun-zhao; NONG Wei-xia; LI Hong-an; LI Feng

    2009-01-01

    Background Previous cytogenetic studies revealed aberrations varied among the throe subtypes of rhabdomyosarcoma. We profiled chromosomal imbalances in the different subtypes and investigated the relationships between clinical parameters and genomic aberrations.Methods Comparative genomic hybridization was used to investigate genomic imbalances in 25 cases of primary rhabdomyosarcomas and two rhabdomyosarcoma cell lines. Specimens were reviewed to determine histological type, pathological grading and clinical staging.Results Changes involving one or more regions of the genome were seen in all rhabdomyosarcomal patients. For rhabdomyosarcoma, DNA sequence gains were most frequently (>30%) seen in chromosomes 2p, 12q, 6p, 9q, 10q, 1p,2q, 6q, 8q, 15q and 18q; losses from 3p, 11p and 6p. In aggressive alveolar rhabdomyosarcoma, frequent gains were seen on chromosomes 12q, 2p, 6p, 2q, 4q, 10q and 15q; losses from 3p, 6p, 1q and 5q. For embryonic rhabdomyosarcoma, frequent gains were on 7p, 9q, 2p, 18q, 1p and 8q; losses only from 11p. Frequently gained chromosome arms of translocation associated with rhabdomyosarcoma were 12q, 2, 6, 10q, 4q and 15q; losses from 3p,6p and 5q. The frequently gained chromosome arms of nontranslocation associated with rhabdomyosarcoma were 2p,9q and 18q, while 11p and 14q were the frequently lost chromosome arms. Gains on chromosome 12q were significantly correlated with translocation type. Gains on chromosome 9q were significantly correlated with clinical staging. Conclusions Gains on chromosomes 2p, 12q, 6p, 9q, 10q, 1p, 2q, 6q, 8q, 15q and 18q and losses on chromosomes 3p, 11p and 6p may be related to rhabdomyosarcomal carcinogenesis. Furthermore, gains on chromosome 12q may be correlated with translocation and gains on chromosome 9q with the early stages of rhabdomyosarcoma.

  8. Genome-wide mapping in a house mouse hybrid zone reveals hybrid sterility loci and Dobzhansky-Muller interactions.

    Science.gov (United States)

    Turner, Leslie M; Harr, Bettina

    2014-12-09

    Mapping hybrid defects in contact zones between incipient species can identify genomic regions contributing to reproductive isolation and reveal genetic mechanisms of speciation. The house mouse features a rare combination of sophisticated genetic tools and natural hybrid zones between subspecies. Male hybrids often show reduced fertility, a common reproductive barrier between incipient species. Laboratory crosses have identified sterility loci, but each encompasses hundreds of genes. We map genetic determinants of testis weight and testis gene expression using offspring of mice captured in a hybrid zone between M. musculus musculus and M. m. domesticus. Many generations of admixture enables high-resolution mapping of loci contributing to these sterility-related phenotypes. We identify complex interactions among sterility loci, suggesting multiple, non-independent genetic incompatibilities contribute to barriers to gene flow in the hybrid zone.

  9. New techniques for emulsion analysis in a hybrid experiment

    Energy Technology Data Exchange (ETDEWEB)

    Kodama, K. (Aichi University of Education, Kariya 448 (Japan)); Ushida, N. (Aichi University of Education, Kariya 448 (Japan)); Mokhtarani, A. (University of California (Davis), Davis, CA 95616 (United States)); Paolone, V.S. (University of California (Davis), Davis, CA 95616 (United States)); Volk, J.T. (University of California (Davis), Davis, CA 95616 (United States)); Wilcox, J.O. (University of California (Davis), Davis, CA 95616 (United States)); Yager, P.M. (University of California (Davis), Davis, CA 95616 (United States)); Edelstein, R.M. (Carnegie-Mellon University, Pittsburgh, PA 15213 (United States)); Freyberger, A.P. (Carnegie-Mellon University, Pittsburgh, PA 15213 (United States)); Gibaut, D.B. (Carnegie-Mellon University, Pittsburgh, PA 15213 (United States)); Lipton, R.J. (Carnegie-Mellon University, Pittsburgh, PA 15213 (United States)); Nichols, W.R. (Carnegie-Mellon University, Pittsburgh, PA 15213 (United States)); Potter, D.M. (Carnegie-Mellon Univers

    1994-08-01

    A new method, called graphic scanning, was developed by the Nagoya University Group for emulsion analysis in a hybrid experiment. This method enhances both speed and reliability of emulsion analysis. Details of the application of this technique to the analysis of Fermilab experiment E653 are described. ((orig.))

  10. Hybrid Fictionality and Vicarious Narrative Experience

    DEFF Research Database (Denmark)

    Hatavara, Mari Annukka; Mildorf, Jarmila

    2017-01-01

    This article discusses the recent trends in Fictionality Studies and argues for a point of view focusing more on the narrative dimension of fictionality than on the fictive story content. With the analysis of two case studies, where a non-fictional third person narrator represents the experience ...

  11. Hybrid Probabilistic Logics: Theoretical Aspects, Algorithms and Experiments

    NARCIS (Netherlands)

    Michels, S.

    2016-01-01

    Steffen Michels Hybrid Probabilistic Logics: Theoretical Aspects, Algorithms and Experiments Probabilistic logics aim at combining the properties of logic, that is they provide a structured way of expressing knowledge and a mechanical way of reasoning about such knowledge, with the ability of prob

  12. Experiences from the Roadrunner petascale hybrid systems

    Energy Technology Data Exchange (ETDEWEB)

    Kerbyson, Darren J [Los Alamos National Laboratory; Pakin, Scott [Los Alamos National Laboratory; Lang, Mike [Los Alamos National Laboratory; Sancho Pitarch, Jose C [Los Alamos National Laboratory; Davis, Kei [Los Alamos National Laboratory; Barker, Kevin J [Los Alamos National Laboratory; Peraza, Josh [Los Alamos National Laboratory

    2010-01-01

    The combination of flexible microprocessors (AMD Opterons) with high-performing accelerators (IBM PowerXCell 8i) resulted in the extremely powerful Roadrunner system. Many challenges in both hardware and software were overcome to achieve its goals. In this talk we detail some of the experiences in achieving performance on the Roadrunner system. In particular we examine several implementations of the kernel application, Sweep3D, using a work-queue approach, a more portable Thread-building-blocks approach, and an MPI on the accelerator approach.

  13. PV-Diesel Hybrid SCADA Experiment Network Design

    Science.gov (United States)

    Kalu, Alex; Durand, S.; Emrich, Carol; Ventre, G.; Wilson, W.; Acosta, R.

    1999-01-01

    The essential features of an experimental network for renewable power system satellite based supervisory, control and data acquisition (SCADA) are communication links, controllers, diagnostic equipment and a hybrid power system. Required components for implementing the network consist of two satellite ground stations, to satellite modems, two 486 PCs, two telephone receivers, two telephone modems, two analog telephone lines, one digital telephone line, a hybrid-power system equipped with controller and a satellite spacecraft. In the technology verification experiment (TVE) conducted by Savannah State University and Florida Solar Energy Center, the renewable energy hybrid system is the Apex-1000 Mini-Hybrid which is equipped with NGC3188 for user interface and remote control and the NGC2010 for monitoring and basic control tasks. This power system is connected to a satellite modem via a smart interface, RS232. Commands are sent to the power system control unit through a control PC designed as PC1. PC1 is thus connected to a satellite model through RS232. A second PC, designated PC2, the diagnostic PC is connected to both satellite modems via separate analog telephone lines for checking modems'health. PC2 is also connected to PC1 via a telephone line. Due to the unavailability of a second ground station for the ACTS, one ground station is used to serve both the sending and receiving functions in this experiment. Signal is sent from the control PC to the Hybrid system at a frequency f(sub 1), different from f(sub 2), the signal from the hybrid system to the control PC. f(sub l) and f(sub 2) are sufficiently separated to avoid interference.

  14. EARLY EXPERIENCE WITH A HYBRID PROCESSOR: K-MEANS CLUSTERING

    Energy Technology Data Exchange (ETDEWEB)

    M. GOKHALE; ET AL

    2001-02-01

    We discuss hardware/software coprocessing on a hybrid processor for a compute- and data-intensive hyper-spectral imaging algorithm, K-Means Clustering. The experiments are performed on the Altera Excalibur board using the soft IP core 32-bit NIOS RISC processor. In our experiments, we compare performance of the sequential algorithm with two different accelerated versions. We consider granularity and synchronization issues when mapping an algorithm to a hybrid processor. Our results show that on the Excalibur NIOS, a 15% speedup can be achieved over the sequential algorithm on images with 8 spectral bands where the pixels are divided into 8 categories. Speedup is limited by the communication cost of transferring data from external memory through the NIOS processor to the customized circuits. Our results indicate that future hybrid processors must either (1) have a clock rate 10X the speed of the configurable logic circuits or (2) include dual port memories that both the processor and configurable logic can access. If either of these conditions is met, the hybrid processor will show a factor of 10 speedup over the sequential algorithm. Such systems will combine the convenience of conventional processors with the speed of configurable logic.

  15. The chromosomal constitution of fish hybrid lineage revealed by 5S rDNA FISH.

    Science.gov (United States)

    Zhang, Chun; Ye, Lihai; Chen, Yiyi; Xiao, Jun; Wu, Yanhong; Tao, Min; Xiao, Yamei; Liu, Shaojun

    2015-12-03

    The establishment of the bisexual fertile fish hybrid lineage including the allodiploid and allotetraploid hybrids, from interspecific hybridization of red crucian carp (Carassius auratus red var. 2n = 100, 2n = AA) (♀) × common carp (Cyprinus carpio L. 2n = 100, 2n = BB) (♂), provided a good platform to investigate genetic relationship between the parents and their hybrid progenies. The chromosomal inheritance of diploid and allotetraploid hybrid progenies in successive generations, was studied by applying 5S rDNA fluorescence in situ hybridization. Signals of 5S rDNA distinguished the chromosomal constitution of common carp (B-genome) from red crucian carp (A-genome), in which two strong signals were observed on the first submetacentric chromosome, while no major signal was found in common carp. After fish hybridization, one strong signal of 5S rDNA was detected in the same locus on the chromosome of diploid hybrids. As expected, two strong signals were observed in 4nF3 tetraploid hybrids offspring and it is worth mentioning that two strong signals were detected in a separating bivalent of a primary spermatocyte in 4nF3. Furthermore, the mitosis of heterozygous chromosomes was shown normal and stable with blastular tissue histological studies. We revealed that 5S rDNA signal can be applied to discern A-genome from B-genome, and that 5S rDNA bearing chromosomes can be stably passed down in successive generations. Our work provided a significant method in fish breeding and this is important for studies in fish evolutionary biology.

  16. Insight into octoploid strawberry (Fragaria) subgenome composition revealed by GISH analysis of pentaploid hybrids.

    Science.gov (United States)

    Liu, Bo; Poulsen, Elizabeth G; Davis, Thomas M

    2016-02-01

    As the product of interspecific hybridization between its two ancestral octoploid (2n = 8x = 56) species (Fragaria chiloensis and F. virginiana), the cultivated strawberry (F. ×ananassa) is among the most genomically complex of crop plants, harboring subgenomic components derived from as many as four different diploid ancestors. To physically visualize the octoploids' subgenome composition(s), we launched molecular cytogenetic studies using genomic in situ hybridization (GISH), comparative GISH (cGISH), and rDNA-FISH techniques. First, GISH resolution in Fragaria was tested by using diploid and triploid hybrids with predetermined genome compositions. Then, observation of an octoploid genome was implemented by hybridizing chromosomes of pentaploid (2n = 5x = 35) hybrids from F. vesca × F. virginiana with genomic DNA probes derived from diploids (2n = 2x = 14) F. vesca and F. iinumae, which have been proposed by phylogenetic studies to be closely related to the octoploids yet highly divergent from each other. GISH and cGISH results indicated that octoploid-derived gametes (n = 4x = 28) carried seven chromosomes with hybridization affinities to F. vesca, while the remaining 21 chromosomes displayed varying affinities to F. iinumae, indicating differing degrees of subgenomic contribution to the octoploids by these two putatively ancestral diploids. Combined rDNA-FISH revealed severe 25S rDNA loss in both the F. vesca- and F. iinumae-like chromosome groups, while only the prior group retained its 5S loci.

  17. Fine Mapping and Transcriptome Analysis Reveal Candidate Genes Associated with Hybrid Lethality in Cabbage (Brassica Oleracea).

    Science.gov (United States)

    Xiao, Zhiliang; Hu, Yang; Zhang, Xiaoli; Xue, Yuqian; Fang, Zhiyuan; Yang, Limei; Zhang, Yangyong; Liu, Yumei; Li, Zhansheng; Liu, Xing; Liu, Zezhou; Lv, Honghao; Zhuang, Mu

    2017-06-05

    Hybrid lethality is a deleterious phenotype that is vital to species evolution. We previously reported hybrid lethality in cabbage (Brassica oleracea) and performed preliminary mapping of related genes. In the present study, the fine mapping of hybrid lethal genes revealed that BoHL1 was located on chromosome C1 between BoHLTO124 and BoHLTO130, with an interval of 101 kb. BoHL2 was confirmed to be between insertion-deletion (InDels) markers HL234 and HL235 on C4, with a marker interval of 70 kb. Twenty-eight and nine annotated genes were found within the two intervals of BoHL1 and BoHL2, respectively. We also applied RNA-Seq to analyze hybrid lethality in cabbage. In the region of BoHL1, seven differentially expressed genes (DEGs) and five resistance (R)-related genes (two in common, i.e., Bo1g153320 and Bo1g153380) were found, whereas in the region of BoHL2, two DEGs and four R-related genes (two in common, i.e., Bo4g173780 and Bo4g173810) were found. Along with studies in which R genes were frequently involved in hybrid lethality in other plants, these interesting R-DEGs may be good candidates associated with hybrid lethality. We also used SNP/InDel analyses and quantitative real-time PCR to confirm the results. This work provides new insight into the mechanisms of hybrid lethality in cabbage.

  18. Genome comparison of Candida orthopsilosis clinical strains reveals the existence of hybrids between two distinct subspecies.

    Science.gov (United States)

    Pryszcz, Leszek P; Németh, Tibor; Gácser, Attila; Gabaldón, Toni

    2014-05-01

    The Candida parapsilosis species complex comprises a group of emerging human pathogens of varying virulence. This complex was recently subdivided into three different species: C. parapsilosis sensu stricto, C. metapsilosis, and C. orthopsilosis. Within the latter, at least two clearly distinct subspecies seem to be present among clinical isolates (Type 1 and Type 2). To gain insight into the genomic differences between these subspecies, we undertook the sequencing of a clinical isolate classified as Type 1 and compared it with the available sequence of a Type 2 clinical strain. Unexpectedly, the analysis of the newly sequenced strain revealed a highly heterozygous genome, which we show to be the consequence of a hybridization event between both identified subspecies. This implicitly suggests that C. orthopsilosis is able to mate, a so-far unanswered question. The resulting hybrid shows a chimeric genome that maintains a similar gene dosage from both parental lineages and displays ongoing loss of heterozygosity. Several of the differences found between the gene content in both strains relate to virulent-related families, with the hybrid strain presenting a higher copy number of genes coding for efflux pumps or secreted lipases. Remarkably, two clinical strains isolated from distant geographical locations (Texas and Singapore) are descendants of the same hybrid line, raising the intriguing possibility of a relationship between the hybridization event and the global spread of a virulent clone.

  19. Revealing Children's Experiences and Emotions through Q Methodology

    OpenAIRE

    Ingunn T. Ellingsen; Arlene Arstad Thorsen; Ingunn Størksen

    2014-01-01

    Over the last two decades, there has been a greater readiness to view children as competent contributors to our understanding of children’s lives and experiences. As a consequence of this, we have witnessed an increased focus on including children in research. When research aims at revealing children’s perspectives, experiences, and emotions, we need to employ methods that are easy-to-use means for obtaining their stories. In this paper, we argue that Q methodology is particularly suitable fo...

  20. Enhanced Lower Hybrid Current Drive Experiments on HT-7 Tokamak

    Institute of Scientific and Technical Information of China (English)

    2003-01-01

    Effective Lower Hybrid Current Driving (LHCD) and improved confinement exper-iments in higher plasma parameters (Ip > 200 kA, ne> 2×1013 cm-3, Te ≥ 1 keⅤ) havebeen curried out in optimized LH wave spectrum and plasma parameters in HT-7 supercon-ducting tokamak. The dependence of current driving efficiency on LH power spectrum, plasmadensity ne and toroidal magnetic field BT has been obtained under optimal conditions. A goodCD efficiency was obtained at higher plasma current and higher electron density. The improve-ment of the energy confinement time is accompanied with the increase in line averaged electrondensity, and in ion and electron temperatures. The highest current driving efficiency reachedηCD = IpneR/PRF ≈ 1.05 × 1019 Am-2/W. Wave-plasma coupling was sustained in a good stateand the reflective coefficient was less than 5%. The experiments have also demonstrated the abilityof LH wave in the start-up and ramp-up of the plasma current. The measurement of the temporaldistribution of plasma parameter shows that lower hybrid leads to a broader profile in plasmaparameter. The LH power deposition profile and the plasma current density profile were modeledwith a 2D Fokker-Planck code corresponding to the evolution process of the hard x-ray detectorarray.

  1. Molecular genetic analyses of mating pheromones reveal intervariety mating or hybridization in Cryptococcus neoformans.

    Science.gov (United States)

    Chaturvedi, Vishnu; Fan, Jinjiang; Stein, Birgit; Behr, Melissa J; Samsonoff, William A; Wickes, Brian L; Chaturvedi, Sudha

    2002-09-01

    The sexual mating of the pathogenic yeast Cryptococcus neoformans is important for pathogenesis studies because the fungal virulence is linked to the alpha mating type (MAT(alpha)). We characterized C. neoformans mating pheromones (MF(alpha) 1 and MFa1) from 122 strains to understand intervariety hybridization or mating and intervariety virulence. MF(alpha) 1 in three C. neoformans varieties showed (a) specific nucleotide polymorphisms, (b) different copy numbers and chromosomal localizations, and (c) unique deduced amino acids in two geographic populations of C. neoformans var. gattii. MF(alpha) 1 of different varieties cross-hybridized in Southern hybridizations. Their phylogenetic analyses showed purifying selection (neutral evolution). These observations suggested that MAT(alpha) strains from any of the three C. neoformans varieties could mate or hybridize in nature with MATa strains of C. neoformans var. neoformans. A few serotype A/D diploid strains provided evidence for mating or hybridization, while a majority of A/D strains tested positive for haploid MF(alpha) 1 identical to that of C. neoformans var. grubii. MF(alpha) 1 sequence and copy numbers in diploids were identical to those of C. neoformans var. grubii, while their MFa1 sequences were identical to those of C. neoformans var. neoformans; thus, these strains were hybrids. The mice survival curves and histological lesions revealed A/D diploids to be highly pathogenic, with pathogenicity levels similar to that of the C. neoformans var. grubii type strain and unlike the low pathogenicity levels of C. neoformans var. neoformans strains. In contrast to MF(alpha) 1 in three varieties, MFa1 amplicons and hybridization signals could be obtained only from two C. neoformans var. neoformans reference strains and eight A/D diploids. This suggested that a yet undiscovered MFa pheromone(s) in C. neoformans var. gattii and C. neoformans var. grubii is unrelated to, highly divergent from, or rarer than that in C

  2. Patterns of hybrid loss of imprinting reveal tissue- and cluster-specific regulation.

    Directory of Open Access Journals (Sweden)

    Christopher D Wiley

    Full Text Available BACKGROUND: Crosses between natural populations of two species of deer mice, Peromyscus maniculatus (BW, and P. polionotus (PO, produce parent-of-origin effects on growth and development. BW females mated to PO males (bwxpo produce growth-retarded but otherwise healthy offspring. In contrast, PO females mated to BW males (POxBW produce overgrown and severely defective offspring. The hybrid phenotypes are pronounced in the placenta and include POxBW conceptuses which lack embryonic structures. Evidence to date links variation in control of genomic imprinting with the hybrid defects, particularly in the POxBW offspring. Establishment of genomic imprinting is typically mediated by gametic DNA methylation at sites known as gDMRs. However, imprinted gene clusters vary in their regulation by gDMR sequences. METHODOLOGY/PRINCIPAL FINDINGS: Here we further assess imprinted gene expression and DNA methylation at different cluster types in order to discern patterns. These data reveal POxBW misexpression at the Kcnq1ot1 and Peg3 clusters, both of which lose ICR methylation in placental tissues. In contrast, some embryonic transcripts (Peg10, Kcnq1ot1 reactivated the silenced allele with little or no loss of DNA methylation. Hybrid brains also display different patterns of imprinting perturbations. Several cluster pairs thought to use analogous regulatory mechanisms are differentially affected in the hybrids. CONCLUSIONS/SIGNIFICANCE: These data reinforce the hypothesis that placental and somatic gene regulation differs significantly, as does that between imprinted gene clusters and between species. That such epigenetic regulatory variation exists in recently diverged species suggests a role in reproductive isolation, and that this variation is likely to be adaptive.

  3. Hybrid pairwise likelihood analysis of animal behavior experiments.

    Science.gov (United States)

    Cattelan, Manuela; Varin, Cristiano

    2013-12-01

    The study of the determinants of fights between animals is an important issue in understanding animal behavior. For this purpose, tournament experiments among a set of animals are often used by zoologists. The results of these tournament experiments are naturally analyzed by paired comparison models. Proper statistical analysis of these models is complicated by the presence of dependence between the outcomes of fights because the same animal is involved in different contests. This paper discusses two different model specifications to account for between-fights dependence. Models are fitted through the hybrid pairwise likelihood method that iterates between optimal estimating equations for the regression parameters and pairwise likelihood inference for the association parameters. This approach requires the specification of means and covariances only. For this reason, the method can be applied also when the computation of the joint distribution is difficult or inconvenient. The proposed methodology is investigated by simulation studies and applied to real data about adult male Cape Dwarf Chameleons. © 2013, The International Biometric Society.

  4. Revealing Children's Experiences and Emotions through Q Methodology

    Directory of Open Access Journals (Sweden)

    Ingunn T. Ellingsen

    2014-01-01

    Full Text Available Over the last two decades, there has been a greater readiness to view children as competent contributors to our understanding of children’s lives and experiences. As a consequence of this, we have witnessed an increased focus on including children in research. When research aims at revealing children’s perspectives, experiences, and emotions, we need to employ methods that are easy-to-use means for obtaining their stories. In this paper, we argue that Q methodology is particularly suitable for facilitating children’s participation in research. We will give a brief presentation of the methodology and demonstrate its relevance for research with children. We do so by presenting two research examples aiming at revealing children’s experiences and emotions in challenging life circumstances. In the first example, Q methodology was used with five-year-old children where the research topic was divorce. The second example is a study on family perceptions among adolescents in foster home care.

  5. Phylogenetic Relationship of Dendranthema (DC.) Des Moul. Revealed by Fluorescent In Situ Hybridization

    Institute of Scientific and Technical Information of China (English)

    Si-Lan DAI; Wen-Kui WANG; Mao-Xue LI; Ying-Xiu XU

    2005-01-01

    Phylogenetic relationships of the different species in the genus Dendranthema (DC.) Des Moul. were estimated based on chromosome fluorescent in situ hybridization (FISH) with 18S-26S rDNA of Arabidopsis and genomic DNA of Dendranthema as probes. The results revealed that there was no positive correlation between the number of nuclear organization region (NOR) loci and the ploidy of Dendranthema.The exact cytogenetic information of NORs about 14 operational taxonomic units (OTUs) indicated that D.vestitum (Hemsl.) Ling et Shih was closer to the cultivars than other putative species, whereas D. zawadskii (Herb.) Tzvel. was the most distinct. The ambiguously distributed signals of genomic in situ hybridization (GISH) with genomic DNA of lower ploidy species as probes suggested that different genomes among Dendranthema were mixed. The result also indicated the limitation of GISH in studies on the phylogenetic relationships of the different species in this genus Dendranthema and on the origin of cultivated chrysanthemums. Based on these results and previous research, the origin of Chinese cultivated chrysanthemum is discussed.

  6. Fast electron dynamics in lower hybrid current drive experiment on HT-7 tokamak

    Institute of Scientific and Technical Information of China (English)

    Shi Yue-Jiang; Kuang Gang-Li; Li Jian-Gang; HT-7 Team; Wan Bao-Nian; Chen Zhong-Yong; Hu Li-Qun; Lin Shi-Yao; Ruan Huai-Lin; Qian Jin-Ping; Zhen Xiang-Jun; Ding Bo-Jiang

    2005-01-01

    The dynamic behaviour of fast electron in lower hybrid current drive (LHCD) experiments is a crucial issue in the sense of enhancing plasma performance. A new hard x-ray diagnostic system on HT-7 allows the investigation of the lower hybrid wave dynamics. The behaviour of fast electron is studied in several kinds of LHCD experiments, including long pulse discharges, high performance discharges and counter-LHCD experiments.

  7. Experience and Interpretation: Emotion as Revealed in Narration

    Directory of Open Access Journals (Sweden)

    Annikki Kaivola-Bregenhøj

    2008-12-01

    Full Text Available I discuss in this article some key narratives of women I interviewed in Ingria 1992–1993. The narratives of those women were about dramatic stages of their lives during the World War II. The main themes of the life stories were forced transfers and deportation suffered by the Ingrian Finns. I examine with some examples how various paralinguistic devices, such as speech tempo, emotional outbursts or silence, were tied in with the verbalisation of experiences. The three factors I discuss here are woven into the narratives of the women I interviewed. The first factor is “impassioned narrating”, which shows how a narrator reveals how she is reliving the event, she told about. The second factor is weeping and we may ask how the tears affect the narrator. The third factor is silence and reticence. In retrospect I have thought about the therapeutic effect of speaking, forgetting and remaining silent.

  8. Designing a Hybrid Laminar-Flow Control Experiment: The CFD-Experiment Connection

    Science.gov (United States)

    Streett, C. L.

    2003-01-01

    The NASA/Boeing hybrid laminar flow control (HLFC) experiment, designed during 1993-1994 and conducted in the NASA LaRC 8-foot Transonic Pressure Tunnel in 1995, utilized computational fluid dynamics and numerical simulation of complex fluid mechanics to an unprecedented extent for the design of the test article and measurement equipment. CFD was used in: the design of the test wing, which was carried from definition of desired disturbance growth characteristics, through to the final airfoil shape that would produce those growth characteristics; the design of the suction-surface perforation pattern that produced enhanced crossflow-disturbance growth: and in the design of the hot-wire traverse system that produced minimal influence on measured disturbance growth. These and other aspects of the design of the test are discussed, after the historical and technical context of the experiment is described.

  9. Kinetics of hybridization on surface oligonucleotide microchips: theory, experiment, and comparison with hybridization on gel-based microchips.

    Science.gov (United States)

    Sorokin, N V; Chechetkin, V R; Pan'kov, S V; Somova, O G; Livshits, M A; Donnikov, M Y; Turygin, A Y; Barsky, V E; Zasedatelev, A S

    2006-08-01

    The optimal design of oligonucleotide microchips and efficient discrimination between perfect and mismatch duplexes strongly depend on the external transport of target DNA to the cells with immobilized probes as well as on respective association and dissociation rates at the duplex formation. In this paper we present the relevant theory for hybridization of DNA fragments with oligonucleotide probes immobilized in the cells on flat substrate. With minor modifications, our theory also is applicable to reaction-diffusion hybridization kinetics for the probes immobilized on the surface of microbeads immersed in hybridization solution. The main theoretical predictions are verified with control experiments. Besides that, we compared the characteristics of the surface and gel-based oligonucleotide microchips. The comparison was performed for the chips printed with the same pin robot, for the signals measured with the same devices and processed by the same technique, and for the same hybridization conditions. The sets of probe oligonucleotides and the concentrations of probes in respective solutions used for immobilization on each platform were identical as well. We found that, despite the slower hybridization kinetics, the fluorescence signals and mutation discrimination efficiency appeared to be higher for the gel-based microchips with respect to their surface counterparts even for the relatively short hybridization time about 0.5-1 hour. Both the divergence between signals for perfects and the difference in mutation discrimination efficiency for the counterpart platforms rapidly grow with incubation time. In particular, for hybridization during 3 h the signals for gel-based microchips surpassed their surface counterparts in 5-20 times, while the ratios of signals for perfect-mismatch pairs for gel microchips exceeded the corresponding ratios for surface microchips in 2-4 times. These effects may be attributed to the better immobilization efficiency and to the higher

  10. Genetic tests of ancient asexuality in Root Knot Nematodes reveal recent hybrid origins

    Directory of Open Access Journals (Sweden)

    Lunt David H

    2008-07-01

    Full Text Available Abstract Background The existence of "ancient asexuals", taxa that have persisted for long periods of evolutionary history without sexual recombination, is both controversial and important for our understanding of the evolution and maintenance of sexual reproduction. A lack of sex has consequences not only for the ecology of the asexual organism but also for its genome. Several genetic signatures are predicted from long-term asexual (apomictic reproduction including (i large "allelic" sequence divergence (ii lack of phylogenetic clustering of "alleles" within morphological species and (iii decay and loss of genes specific to meiosis and sexual reproduction. These genetic signatures can be hard to assess since it is difficult to demonstrate the allelic nature of very divergent sequences, divergence levels may be complicated by processes such as inter-specific hybridization, and genes may have secondary roles unrelated to sexual reproduction. Apomictic species of Meloidogyne root knot nematodes have been suggested previously to be ancient asexuals. Their relatives reproduce by meiotic parthenogenesis or facultative sexuality, which in combination with the abundance of nematode genomic sequence data, makes them a powerful system in which to study the consequences of reproductive mode on genomic divergence. Results Here, sequences from nuclear protein-coding genes are used to demonstrate that the first two predictions of ancient asexuality are found within the apomictic root knot nematodes. Alleles are more divergent in the apomictic taxa than in those species exhibiting recombination and do not group phylogenetically according to recognized species. In contrast some nuclear alleles, and mtDNA, are almost identical across species. Sequencing of Major Sperm Protein, a gamete-specific gene, from both meiotic and ameiotic species reveals no increase in evolutionary rate nor change in substitution pattern in the apomictic taxa, indicating that the locus

  11. Initiation of a thrust fault revealed by analog experiments

    Science.gov (United States)

    Dotare, Tatsuya; Yamada, Yasuhiro; Adam, Juergen; Hori, Takane; Sakaguchi, Hide

    2016-08-01

    To reveal in detail the process of initiation of a thrust fault, we conducted analog experiments with dry quartz sand using a high-resolution digital image correlation technique to identify minor shear-strain patterns for every 27 μm of shortening (with an absolute displacement accuracy of 0.5 μm). The experimental results identified a number of "weak shear bands" and minor uplift prior to the initiation of a thrust in cross-section view. The observations suggest that the process is closely linked to the activity of an adjacent existing thrust, and can be divided into three stages. Stage 1 is characterized by a series of abrupt and short-lived weak shear bands at the location where the thrust will subsequently be generated. The area that will eventually be the hanging wall starts to uplift before the fault forms. The shear strain along the existing thrust decreases linearly during this stage. Stage 2 is defined by the generation of the new thrust and active displacements along it, identified by the shear strain along the thrust. The location of the new thrust may be constrained by its back-thrust, generally produced at the foot of the surface slope. The activity of the existing thrust falls to zero once the new thrust is generated, although these two events are not synchronous. Stage 3 of the thrust is characterized by a constant displacement that corresponds to the shortening applied to the model. Similar minor shear bands have been reported in the toe area of the Nankai accretionary prism, SW Japan. By comparing several transects across this subduction margin, we can classify the lateral variations in the structural geometry into the same stages of deformation identified in our experiments. Our findings may also be applied to the evaluation of fracture distributions in thrust belts during unconventional hydrocarbon exploration and production.

  12. Coherence Imaging Measurements of Impurity Flow in the Compact Toroidal Hybrid Experiment

    Science.gov (United States)

    Ennis, D. A.; Hartwell, G. J.; Johnson, C. A.; Maurer, D. A.; Allen, S. L.; Meyer, W. H.; Samuell, C. M.

    2016-10-01

    Measurements of impurity ion emissivity and velocity in the Compact Toroidal Hybrid (CTH) experiment are achieved with a new optical coherence imaging diagnostic. The Coherence Imaging Spectroscopy (CIS) technique measures the spectral coherence of an emission line with an imaging interferometer of fixed delay. CIS has a number of advantages when compared to dispersive Doppler spectroscopy, including higher throughput and the capability to provide 2D spectral images, making it ideal for investigating the non-axisymmetric geometry of CTH plasmas. Furthermore, detailed measurements of the ion flow structure provided by CIS combined with predictive computational models could also provide spatially resolved images of complex flow structures, such as those associated with an island divertor. First CIS measurements of CTH plasmas reveal strong signals for C III (465 nm), He II (468 nm) and C II (513 nm) emission. Preliminary analysis of C III interferograms indicate a net toroidal flow on the order of 10 km/s during the time of peak current. Bench tests using Zn and Cd light sources reveal that the temperature of the instrument must be actively controlled to within 0.01°C to limit phase drift of the interferometer resulting in artificially measured flow. Results from this diagnostic will aid in characterizing the ion flow in planned island divertor and MHD mode-locking experiments. Work supported by USDoE Grant DE-FG02-00ER54610.

  13. Genomic markers reveal introgressive hybridization in the Indo-West Pacific mangroves: a case study.

    Directory of Open Access Journals (Sweden)

    Mei Sun

    Full Text Available Biodiversity of mangrove ecosystems is difficult to assess, at least partly due to lack of genetic verification of morphology-based documentation of species. Natural hybridization, on the one hand, plays an important role in evolution as a source of novel gene combinations and a mechanism of speciation. However, on the other hand, recurrent introgression allows gene flow between species and could reverse the process of genetic differentiation among populations required for speciation. To understand the dynamic evolutionary consequences of hybridization, this study examines genomic structure of hybrids and parental species at the population level. In the Indo-West Pacific, Bruguiera is one of the dominant mangrove genera and species ranges overlap extensively with one another. Morphological intermediates between sympatric Bruguiera gymnorrhiza and Bruguiera sexangula have been reported as a variety of B. sexangula or a new hybrid species, B. × rhynchopetala. However, the direction of hybridization and extent of introgression are unclear. A large number of species-specific inter-simple sequence repeat (ISSR markers were found in B. gymnorrhiza and B. sexangula, and the additive ISSR profiling of B. × rhynchopetala ascertained its hybrid status and identified its parental origin. The varying degree of scatterness among hybrid individuals in Principal Coordinate Analysis and results from NewHybrids analysis indicate that B. × rhynchopetala comprises different generations of introgressants in addition to F(1s. High genetic relatedness between B. × rhynchopetala and B. gymnorrhiza based on nuclear and chloroplast sequences suggests preferential hybrid backcrosses to B. gymnorrhiza. We conclude that B. × rhynchopetala has not evolved into an incipient hybrid species, and its persistence can be explained by recurrent hybridization and introgression. Genomic data provide insights into the hybridization dynamics of mangrove plants. Such information

  14. Maturation experiments reveal bias in the fossil record of feathers

    Science.gov (United States)

    McNamara, Maria; Field, Daniel

    2016-04-01

    The evolutionary history of birds and feathers is a major focus in palaeobiology and evolutionary biology. Diverse exceptionally preserved birds and feathered dinosaurs from Jurassic and Cretaceous biotas in China have provided pivotal evidence of early feathers and feather-like integumentary features, but the true nature of many of these fossil soft tissues is still debated. Interpretations of feathers at intermediate developmental stages (i.e. Stages II, III and IV) and of simple quill-like (Stage I) feathers are particularly controversial. This reflects key uncertainties relating to the preservation potential of feathers at different evolutionary-developmental stages, and to the relative preservation potential of diagnostic features of Stage I feathers and hair. To resolve these issues, we used high pressure-high temperature autoclave experiments to simulate the effects of burial on modern feathers from the Black Coucal (Centropus grilii) and Common Starling (Sturnus vulgaris), and on human hair. Our results reveal profound differences in the recalcitrance of feathers of different types during maturation: Stage I and Stage V feathers retain diagnostic morphological and ultrastructural details following maturation, whereas other feather types do not. Further, the morphology and arrangement of certain ultrastructural features diagnostic of Stages III and IV, e.g. barbules, are preferentially lost during maturation. These results indicate a pervasive bias in the fossil record of feathers, whereby preservation of feathers at Stages I and V is favored. Critical stages in the evolution of feathers, i.e. Stages II, III and IV, are less likely to be preserved and more likely to be misinterpreted as feathers at earlier developmental stages. Our discovery has major implications for our understanding of the fidelity of the fossil record of feathers and provides a framework for testing the significance of putative examples of fossil feathers at different developmental

  15. Experiments on a Hybrid Composite Beam for Bridge Applications

    OpenAIRE

    Van Nosdall, Stephen Paul

    2013-01-01

    This thesis details a study of the structural behavior of Hybrid-Composite Beams (HCB) consisting of a fiber reinforced polymer (FRP) shell with a concrete arch tied with steel prestressing strands.  The HCB offers advantages in life cycle costs through reduced transportation weight and increased corrosion resistance. By better understanding the system behavior, the proportion of load in each component can be determined, and each component can be designed for the appropriate forces. A long te...

  16. A radiation hybrid map of chromosome ID reveals synteny conservation at a wheat speciation locus.

    Science.gov (United States)

    The species cytoplasm specific (scs) genes affect nuclear-cytoplasmic interactions in interspecific hybrids. A radiation hybrid (RH) mapping population of 188 individuals was employed to refine the location of the scsae locus of Tritcum aestivum chromosome 1D. ‘Wheat Zapper’, a comparative genomic...

  17. Spacecraft Hybrid (Mixed-Actuator) Attitude Control Experiences on NASA Science Missions

    Science.gov (United States)

    Dennehy, Cornelius J.

    2014-01-01

    There is a heightened interest within NASA for the design, development, and flight implementation of mixed-actuator hybrid attitude control systems for science spacecraft that have less than three functional reaction wheel actuators. This interest is driven by a number of recent reaction wheel failures on aging, but what could be still scientifically productive, NASA spacecraft if a successful hybrid attitude control mode can be implemented. Over the years, hybrid (mixed-actuator) control has been employed for contingency attitude control purposes on several NASA science mission spacecraft. This paper provides a historical perspective of NASA's previous engineering work on spacecraft mixed-actuator hybrid control approaches. An update of the current situation will also be provided emphasizing why NASA is now so interested in hybrid control. The results of the NASA Spacecraft Hybrid Attitude Control Workshop, held in April of 2013, will be highlighted. In particular, the lessons learned captured from that workshop will be shared in this paper. An update on the most recent experiences with hybrid control on the Kepler spacecraft will also be provided. This paper will close with some future considerations for hybrid spacecraft control.

  18. A prototype hybrid pixel detector ASIC for the CLIC experiment

    CERN Document Server

    Valerio, P; Arfaoui, S; Ballabriga, R; Benoit, M; Bonacini, S; Campbell, M; Dannheim, D; De Gaspari, M; Felici, D; Kulis, S; Llopart, X; Nascetti, A; Poikela, T; Wong, W S

    2014-01-01

    A prototype hybrid pixel detector ASIC specifically designed to the requirements of the vertex detector for CLIC is described and first electrical measurements are presented. The chip has been designed using a commercial 65 nm CMOS technology and comprises a matrix of 64x64 square pixels with 25 μm pitch. The main features include simultaneous 4-bit measure- ment of Time-over-Threshold (ToT) and Time-of-Arrival (ToA) with 10 ns accuracy, on-chip data compression and power pulsing capability.

  19. Genome differentiation in Magonoliaceae as revealed from meiotic pairing in interspecific and intergeneric hybrids

    Institute of Scientific and Technical Information of China (English)

    Shou-Zhou ZHANG; Ya-Ling WANG; Zi-Can HE; Erland EJDER

    2011-01-01

    The cross compatibility within and between Yulania Spach and Michelia L.(Magnoliaceae) is relatively good and various such hybrids,obtained by conventional artificial hybridization,are available.The aim of the present study was to determine the extent of genome differentiation between the species involved in these crosses through the observation of chromosome pairing during meiosis in pollen mother cells (PMCs) of the hybrids.Chromosome pairing behavior was studied in five species (2n =38) and two interspecific hybrids of Michelia,eight species (2n =38,76 and 114) and 10 interspecific hybrids of Yulania,and three intergeneric hybrids between Michelia and Yulania.The results showed that chromosome pairing was normal with bivalent formation in diploid parental species and in interspecific hybrids.In addition to bivalents,multivalents were encountered in polyploid parental species and polyploid interspecific hybrids.In the intergeneric hybrids between a tetraploid Yulania and two diploid Michelia,19 chromosomes,most likely originating from Michelia,were unable to synapse from zygotene to metaphase I.Meiotic chromosome pairing indicated a high degree of homology between species within Michelia and Yulania and less homology between the genomes of these two genera.The differentiation of morphological characters and the distinctness of natural distribution also support the conclusion that these two genera are likely independent monophyletic groups.This suggests that the two genera were split at early evolution of Magnoliaceae and the overlapping characteristics in external morphology and internal structures of the two genera may be the result of parallel evolution or ancient common ancestry.

  20. Lower Hybrid Current Drive Experiments in Alcator C-Mod

    Energy Technology Data Exchange (ETDEWEB)

    J.R. Wilson, S. Bernabei, P. Bonoli, A. Hubbard, R. Parker, A. Schmidt, G. Wallace, J. Wright, and the Alcator C-Mod Team

    2007-10-09

    A Lower Hybrid Current Drive (LHCD) system has been installed on the Alcator C-MOD tokamak at MIT. Twelve klystrons at 4.6 GHz feed a 4x22 waveguide array. This system was designed for maximum flexibility in the launched parallel wave-number spectrum. This flexibility allows tailoring of the lower hybrid deposition under a variety of plasma conditions. Power levels up to 900 kW have been injected into the tokomak. The parallel wave number has been varied over a wide range, n|| ~ 1.6–4. Driven currents have been inferred from magnetic measurements by extrapolating to zero loop voltage and by direct comparison to Fisch-Karney theory, yielding an efficiency of n20IR/P ~ 0.3. Modeling using the CQL3D code supports these efficiencies. Sawtooth oscillations vanish, accompanied with peaking of the electron temperature (Te0 rises from 2.8 to 3.8 keV). Central q is inferred to rise above unity from the collapse of the sawtooth inversion radius, indicating off-axis cd as expected. Measurements of non-thermal x-ray and electron cyclotron emission confirm the presence of a significant fast electron population that varies with phase and plasma density. The x-ray emission is observed to be radialy broader than that predicted by simple ray tracing codes. Possible explanations for this broader emission include fast electron diffusion or broader deposition than simple ray tracing predictions (perhaps due to diffractive effects).

  1. Molecular data reveal complex hybridization and a cryptic species of neotropical wild cat.

    Science.gov (United States)

    Trigo, Tatiane C; Schneider, Alexsandra; de Oliveira, Tadeu G; Lehugeur, Livia M; Silveira, Leandro; Freitas, Thales R O; Eizirik, Eduardo

    2013-12-16

    Hybridization among animal species has recently become more recognized as an important phenomenon, especially in the context of recent radiations. Here we show that complex hybridization has led to contrasting patterns of genomic composition among closely related species of the Neotropical cat genus Leopardus. We show strong evidence of ancient hybridization and introgression between the pampas cat (L. colocolo) and northeastern populations of tigrina (L. tigrinus), leading to remarkable cytonuclear discordance in the latter. In contrast, southern tigrina populations show recent and continuing hybridization with Geoffroy's cat (L. geoffroyi), leading to extreme levels of interspecific admixture at their contact zone. Finally, we demonstrate that two seemingly continuous Brazilian tigrina populations show no evidence of ongoing gene flow between them, leading us to support their formal recognition as distinct species, namely L. tigrinus in the northeast and L. guttulus in the south.

  2. Revisiting Milgram's Cyranoid Method: Experimenting With Hybrid Human Agents.

    Science.gov (United States)

    Corti, Kevin; Gillespie, Alex

    2015-01-01

    In two studies based on Stanley Milgram's original pilots, we present the first systematic examination of cyranoids as social psychological research tools. A cyranoid is created by cooperatively joining in real-time the body of one person with speech generated by another via covert speech shadowing. The resulting hybrid persona can subsequently interact with third parties face-to-face. We show that naïve interlocutors perceive a cyranoid to be a unified, autonomously communicating person, evidence for a phenomenon Milgram termed the "cyranic illusion." We also show that creating cyranoids composed of contrasting identities (a child speaking adult-generated words and vice versa) can be used to study how stereotyping and person perception are mediated by inner (dispositional) vs. outer (physical) identity. Our results establish the cyranoid method as a unique means of obtaining experimental control over inner and outer identities within social interactions rich in mundane realism.

  3. Rapid fixation of non-native alleles revealed by genome-wide SNP analysis of hybrid tiger salamanders

    Directory of Open Access Journals (Sweden)

    Shaffer H Bradley

    2009-07-01

    Full Text Available Abstract Background Hybrid zones represent valuable opportunities to observe evolution in systems that are unusually dynamic and where the potential for the origin of novelty and rapid adaptation co-occur with the potential for dysfunction. Recently initiated hybrid zones are particularly exciting evolutionary experiments because ongoing natural selection on novel genetic combinations can be studied in ecological time. Moreover, when hybrid zones involve native and introduced species, complex genetic patterns present important challenges for conservation policy. To assess variation of admixture dynamics, we scored a large panel of markers in five wild hybrid populations formed when Barred Tiger Salamanders were introduced into the range of California Tiger Salamanders. Results At three of 64 markers, introduced alleles have largely displaced native alleles within the hybrid populations. Another marker (GNAT1 showed consistent heterozygote deficits in the wild, and this marker was associated with embryonic mortality in laboratory F2's. Other deviations from equilibrium expectations were idiosyncratic among breeding ponds, consistent with highly stochastic demographic effects. Conclusion While most markers retain native and introduced alleles in expected proportions, strong selection appears to be eliminating native alleles at a smaller set of loci. Such rapid fixation of alleles is detectable only in recently formed hybrid zones, though it might be representative of dynamics that frequently occur in nature. These results underscore the variable and mosaic nature of hybrid genomes and illustrate the potency of recombination and selection in promoting variable, and often unpredictable genetic outcomes. Introgression of a few, strongly selected introduced alleles should not necessarily affect the conservation status of California Tiger Salamanders, but suggests that genetically pure populations of this endangered species will be difficult to

  4. Iontophoresis and Flame Photometry: A Hybrid Interdisciplinary Experiment

    Science.gov (United States)

    Sharp, Duncan; Cottam, Linzi; Bradley, Sarah; Brannigan, Jeanie; Davis, James

    2010-01-01

    The combination of reverse iontophoresis and flame photometry provides an engaging analytical experiment that gives first-year undergraduate students a flavor of modern drug delivery and analyte extraction techniques while reinforcing core analytical concepts. The experiment provides a highly visual demonstration of the iontophoresis technique and…

  5. Hybrid or open pollinated maize varieties? A socio-economic assessment of Nepalese farmers’ experiences

    Directory of Open Access Journals (Sweden)

    Binod Kafle

    2012-12-01

    Full Text Available Analysis of factors affecting adoption of hybrid and open pollinated maize varieties had not been taken yet in Nepal. Viewing this fact, this study was undertaken consisting of four purposively selected VDCs from two central Terai districts, Bara and Sarlahi, of Nepal. A total of 110 maize growers including 86 adopters and 24 non adopters of hybrid maize varieties (adopters of open pollinated maize varieties were interviewed with the help of structured questionnaire. Results of t-test showed that adopters of hybrid maize varieties had significantly larger farm size and, size of maize farm, were more experienced on maize farming, and used significantly higher amount of chemical fertilizers but lower amount of organic manures than the non-adopters. Further, more adopters used irrigation water, pesticides and hired labor than the non-adopters. The result showed that a substantial proportion of land area grown to maize was cultivated to hybrid maize varieties with an adoption rate of 81.9 % while the adoption rate for open pollinated varieties was estimated as 18.1%. The results of the binary logistic regression analysis showed that adoption of hybrid maize was positively influenced by farm size, irrigation availability, farmer’s attitude towards insect and disease tolerance characteristics of hybrid maize, male headed family and credit availability in the surveyed area. However, farming experience on maize was negatively associated with the adoption of hybrid maize varieties.

  6. Interspecies comparative genome hybridization and interspecies representational difference analysis reveal gross DNA differences between humans and great apes.

    Science.gov (United States)

    Toder, R; Xia, Y; Bausch, E

    1998-09-01

    Comparative chromosome G-/R-banding, comparative gene mapping and chromosome painting techniques have demonstrated that only few chromosomal rearrangements occurred during great ape and human evolution. Interspecies comparative genome hybridization (CGH), used here in this study, between human, gorilla and pygmy chimpanzee revealed species-specific regions in all three species. In contrast to the human, a far more complex distribution of species-specific blocks was detected with CGH in gorilla and pygmy chimpanzee. Most of these blocks coincide with already described heterochromatic regions on gorilla and chimpanzee chromosomes. Representational difference analysis (RDA) was used to subtract the complex genome of gorilla against human in order to enrich gorilla-specific DNA sequences. Gorilla-specific clones isolated with this technique revealed a 32-bp repeat unit. These clones were mapped by fluorescence in situ hybridization (FISH) to the telomeric regions of gorilla chromosomes that had been shown by interspecies CGH to contain species-specific sequences.

  7. Multiple ITS copies reveal extensive hybridization within Rheum (Polygonaceae, a genus that has undergone rapid radiation.

    Directory of Open Access Journals (Sweden)

    Dongshi Wan

    Full Text Available BACKGROUND: During adaptive radiation events, characters can arise multiple times due to parallel evolution, but transfer of traits through hybridization provides an alternative explanation for the same character appearing in apparently non-sister lineages. The signature of hybridization can be detected in incongruence between phylogenies derived from different markers, or from the presence of two divergent versions of a nuclear marker such as ITS within one individual. METHODOLOGY/PRINCIPAL FINDINGS: In this study, we cloned and sequenced ITS regions for 30 species of the genus Rheum, and compared them with a cpDNA phylogeny. Seven species contained two divergent copies of ITS that resolved in different clades from one another in each case, indicating hybridization events too recent for concerted evolution to have homogenised the ITS sequences. Hybridization was also indicated in at least two further species via incongruence in their position between ITS and cpDNA phylogenies. None of the ITS sequences present in these nine species matched those detected in any other species, which provides tentative evidence against recent introgression as an explanation. Rheum globulosum, previously indicated by cpDNA to represent an independent origin of decumbent habit, is indicated by ITS to be part of clade of decumbent species, which acquired cpDNA of another clade via hybridization. However decumbent and glasshouse morphology are confirmed to have arisen three and two times, respectively. CONCLUSIONS: These findings suggested that hybridization among QTP species of Rheum has been extensive, and that a role of hybridization in diversification of Rheum requires investigation.

  8. Traffic Experiment Reveals the Nature of Car-Following

    Science.gov (United States)

    Jiang, Rui; Hu, Mao-Bin; Zhang, H. M.; Gao, Zi-You; Jia, Bin; Wu, Qing-Song; Wang, Bing; Yang, Ming

    2014-01-01

    As a typical self-driven many-particle system far from equilibrium, traffic flow exhibits diverse fascinating non-equilibrium phenomena, most of which are closely related to traffic flow stability and specifically the growth/dissipation pattern of disturbances. However, the traffic theories have been controversial due to a lack of precise traffic data. We have studied traffic flow from a new perspective by carrying out large-scale car-following experiment on an open road section, which overcomes the intrinsic deficiency of empirical observations. The experiment has shown clearly the nature of car-following, which runs against the traditional traffic flow theory. Simulations show that by removing the fundamental notion in the traditional car-following models and allowing the traffic state to span a two-dimensional region in velocity-spacing plane, the growth pattern of disturbances has changed qualitatively and becomes qualitatively or even quantitatively in consistent with that observed in the experiment. PMID:24740284

  9. Revealing the role of organic cations in hybrid halide perovskite CH3NH3PbI3

    OpenAIRE

    Sanvito, Stefano; Motta, Carlo

    2015-01-01

    The hybrid halide perovskite CH$_{3}$NH$_{3}$PbI$_{3}$ has enabled solar cells to reach an efficiency of about 18\\%, demonstrating a pace for improvements with no precedents in the solar energy arena. Despite such explosive progress, the microscopic origin behind the success of such material is still debated, with the role played by the organic cations in the light-harvesting process remaining unclear. Here van-der-Waals-corrected density functional theory calculations reveal that the orienta...

  10. TNB Experience in Developing Solar Hybrid Station at RPS Kemar, Gerik, Perak Darul Ridzuan

    Science.gov (United States)

    Aziz, K. A.; Shamsudin, K. N.

    2013-06-01

    This paper will discuss on TNB experience in developing Solar Hybrid Station at RPS Kemar, Gerik, Perak. TNB has been approached by KKLW to submit proposal to provide electricity in the rural area namely RPS Kemar. Looking at area and source available, Solar Hybrid System was the best method in order to provide electricity at this area. This area is far from national grid sources. Solar Hybrid System is the best method to produce electrical power using the renewable energy from Solar PV, Battery and Diesel Generator Set. Nowadays, price of petroleum is slightly high due to higher demand from industry. Solar energy is good alternative in this country to practice in order to reduce cost for produce of electrical energy. Generally, Solar will produce energy during daytime and when become cloudy and dark, automatically battery and diesel generator set will recover the system through the hybrid controller system.

  11. Eye Movements Reveal Readers' Lexical Quality and Reading Experience

    Science.gov (United States)

    Taylor, Jessica Nelson; Perfetti, Charles A.

    2016-01-01

    Two experiments demonstrate that individual differences among normal adult readers, including lexical quality, are expressed in silent reading at the word level. In the first of two studies we identified major dimensions of variability among college readers and among words using factor analysis. We then examined the effects of these dimensions of…

  12. Seeing is believing: what experiments with microbes reveal about evolution.

    Science.gov (United States)

    van Ditmarsch, Dave; Xavier, Joao B

    2014-01-01

    Darwin's theory of natural selection is among the most powerful ideas in science, yet evolutionary ideas remain challenged to this day. This is in part because evolution often cannot be directly observed. Simple experiments with microbes can change that by enabling direct observation of evolutionary processes.

  13. Separateness Representations in a Sculpting Task: Revealing Maternal Subjective Experience

    Science.gov (United States)

    Bat Or, Michal

    2015-01-01

    This study explored mothers' separateness representations via a clay sculpting task assigned to 24 mothers of preschool children aged 21 months to 4 years. Each participant created a clay sculpture of herself and her child, followed by a semi-structured interview about the sculpting experience and the meaning of the sculpture. Qualitative analyses…

  14. Direct Gamete Sequencing Reveals No Evidence for Segregation Distortion in House Mouse Hybrids.

    Directory of Open Access Journals (Sweden)

    Russell Corbett-Detig

    Full Text Available Understanding the molecular basis of species formation is an important goal in evolutionary genetics, and Dobzhansky-Muller incompatibilities are thought to be a common source of postzygotic reproductive isolation between closely related lineages. However, the evolutionary forces that lead to the accumulation of such incompatibilities between diverging taxa are poorly understood. Segregation distorters are believed to be an important source of Dobzhansky-Muller incompatibilities between hybridizing species of Drosophila as well as hybridizing crop plants, but it remains unclear if these selfish genetic elements contribute to reproductive isolation in other taxa. Here, we collected viable sperm from first-generation hybrid male progeny of Mus musculus castaneus and M. m. domesticus, two subspecies of rodent in the earliest stages of speciation. We then genotyped millions of single nucleotide polymorphisms in these gamete pools and tested for a skew in the frequency of parental alleles across the genome. We show that segregation distorters are not measurable contributors to observed infertility in these hybrid males, despite sufficient statistical power to detect even weak segregation distortion with our novel method. Thus, reduced hybrid male fertility in crosses between these nascent species is attributable to other evolutionary forces.

  15. Variability of ribosomal DNA sites in Festuca pratensis, Lolium perenne, and their intergeneric hybrids, revealed by FISH and GISH.

    Science.gov (United States)

    Ksiazczyk, T; Taciak, M; Zwierzykowski, Z

    2010-01-01

    This study focuses on the variability of chromosomal location and number of ribosomal DNA (rDNA) sites in some diploid and autotetraploid Festuca pratensis and Lolium perenne cultivars, as well as on identification of rDNA-bearing chromosomes in their triploid and tetraploid F. pratensis × L. perenne hybrids. The rDNA loci were mapped using fluorescence in situ hybridization (FISH) with 5S and 25S rDNA probes, and the origin of parental genomes was verified by genomic in situ hybridization (GISH) with L. perenne genomic DNA as a probe, and F. pratensis genomic DNA as a block. FISH detected variation in the number and chromosomal location of both 5S and 45S rDNA sites. In F. pratensis mostly additional signals of 5S rDNA loci occurred, as compared with standard F. pratensis karyotypes. Losses of 45S rDNA loci were more frequent in L. perenne cultivars and intergeneric hybrids. Comparison of the F. pratensis and L. perenne genomes approved a higher number of rDNA sites as well as variation in chromosomal rDNA location in L. perenne. A greater instability of F. pratensis-genome-like and L. perenne-genome-like chromosomes in tetraploid hybrids was revealed, indicating gains and losses of rDNA loci, respectively. Our data indicate that the rDNA loci physically mapped on chromosomes 2 and 3 in F. pratensis and on chromosome 3 in L. perenne are useful markers for these chromosomes in intergeneric Festuca × Lolium hybrids.

  16. Thomson scattering diagnostic on the Compact Toroidal Hybrid Experiment

    Science.gov (United States)

    Traverso, Peter; Maurer, D. A.; Ennis, D. A.; Hartwell, G. J.

    2016-10-01

    A Thomson scattering system is being commissioned for the non-axisymmetric plasmas of the Compact Toroidal Hybrid (CTH), a five-field period current-carrying torsatron. The system takes a single point measurement at the magnetic axis to both calibrate the two- color soft x-ray Te system and serve as an additional diagnostic for the V3FIT 3D equilibrium reconstruction code. A single point measurement will reduce the uncertainty in the reconstructed peak pressure by an order of magnitude for both current-carrying plasmas and future gyrotron-heated stellarator plasmas. The beam, generated by a frequency doubled Continuum 2 J, Nd:YaG laser, is passed vertically through an entrance Brewster window and a two-aperture optical baffle system to minimize stray light. The beam line propagates 8 m to the CTH device mid-plane with the beam diameter < 3 mm inside the plasma volume. Thomson scattered light is collected by two adjacent f/2 plano-convex condenser lenses and focused onto a custom fiber bundle. The fiber is then re-bundled and routed to a Holospec f/1.8 spectrograph to collect the red-shifted scattered light from 535-565 nm. The system has been designed to measure plasmas with core Te of 100 to 200 eV and densities of 5 ×1018 to 5 ×1019 m-3. Work supported by USDOE Grant DE-FG02-00ER54610.

  17. Traffic experiment reveals the nature of car-following.

    Directory of Open Access Journals (Sweden)

    Rui Jiang

    Full Text Available As a typical self-driven many-particle system far from equilibrium, traffic flow exhibits diverse fascinating non-equilibrium phenomena, most of which are closely related to traffic flow stability and specifically the growth/dissipation pattern of disturbances. However, the traffic theories have been controversial due to a lack of precise traffic data. We have studied traffic flow from a new perspective by carrying out large-scale car-following experiment on an open road section, which overcomes the intrinsic deficiency of empirical observations. The experiment has shown clearly the nature of car-following, which runs against the traditional traffic flow theory. Simulations show that by removing the fundamental notion in the traditional car-following models and allowing the traffic state to span a two-dimensional region in velocity-spacing plane, the growth pattern of disturbances has changed qualitatively and becomes qualitatively or even quantitatively in consistent with that observed in the experiment.

  18. Combining stated and revealed choice research to simulate the neighbor effect: The case of hybrid-electric vehicles

    Energy Technology Data Exchange (ETDEWEB)

    Axsen, Jonn [Institute of Transportation Studies, Univ. of California at Davis, 2028 Academic Surge, One Shields Avenue, Davis, CA 95616 (United States); Mountain, Dean C. [DeGroote School of Business, McMaster Univ., 1280 Main Street West, Hamilton, ON L8S 4M4 (Canada); Jaccard, Mark [School of Resource and Environmental Management, Simon Fraser Univ., 8888 Univ. Drive, Burnaby, BC V5A 1S6 (Canada)

    2009-08-15

    According to intuition and theories of diffusion, consumer preferences develop along with technological change. However, most economic models designed for policy simulation unrealistically assume static preferences. To improve the behavioral realism of an energy-economy policy model, this study investigates the ''neighbor effect'', where a new technology becomes more desirable as its adoption becomes more widespread in the market. We measure this effect as a change in aggregated willingness to pay under different levels of technology penetration. Focusing on hybrid-electric vehicles (HEVs), an online survey experiment collected stated preference (SP) data from 535 Canadian and 408 Californian vehicle owners under different hypothetical market conditions. Revealed preference (RP) data was collected from the same respondents by eliciting the year, make and model of recent vehicle purchases from regions with different degrees of HEV popularity: Canada with 0.17% new market share, and California with 3.0% new market share. We compare choice models estimated from RP data only with three joint SP-RP estimation techniques, each assigning a different weight to the influence of SP and RP data in coefficient estimates. Statistically, models allowing more RP influence outperform SP influenced models. However, results suggest that because the RP data in this study is afflicted by multicollinearity, techniques that allow more SP influence in the beta estimates while maintaining RP data for calibrating vehicle class constraints produce more realistic estimates of willingness to pay. Furthermore, SP influenced coefficient estimates also translate to more realistic behavioral parameters for CIMS, allowing more sensitivity to policy simulations. (author)

  19. Nuclear and mitochondrial DNA analysis reveals that hybridization between Fasciola hepatica and Fasciola gigantica occurred in China.

    Science.gov (United States)

    Ichikawa-Seki, Madoka; Peng, Mao; Hayashi, Kei; Shoriki, Takuya; Mohanta, Uday Kumar; Shibahara, Toshiyuki; Itagaki, Tadashi

    2017-02-01

    The well-known pathogens of fasciolosis, Fasciola hepatica (Fh) and Fasciola Gigantica (Fg), possess abundant mature sperms in their seminal vesicles, and thus, they reproduce bisexually. On the other hand, aspermic Fasciola flukes reported from Asian countries, which have no sperm in their seminal vesicles, probably reproduce parthenogenetically. The aim of this study was to reveal the origin of aspermic Fasciola flukes. The nuclear single copy markers, phosphoenolpyruvate carboxykinase and DNA polymerase delta, were employed for analysis of Fasciola species from China. The hybrid origin of aspermic Fasciola flukes was strongly suggested by the presence of the Fh/Fg type, which includes DNA fragments of both F. hepatica and F. gigantica. China can be regarded as the cradle of the interspecific hybridization because F. hepatica and F. gigantica were detected in the northern and southern parts of China, respectively, and hybrids flukes were distributed between the habitats of the two species. The Chinese origin was supported by the fact that a larger number of mitochondrial NADH dehydrogenase subunit 1 (nad1) haplotypes was detected in Chinese aspermic Fasciola populations than in aspermic populations from the neighbouring countries. Hereafter, 'aspermic' Fasciola flukes should be termed as 'hybrid' Fasciola flukes.

  20. Hybridization experiments indicate incomplete reproductive isolating mechanism between Fasciola hepatica and Fasciola gigantica.

    Science.gov (United States)

    Itagaki, T; Ichinomiya, M; Fukuda, K; Fusyuku, S; Carmona, C

    2011-09-01

    Experiments on hybridization between Fasciola hepatica and Fasciola gigantica were carried out to clarify whether a reproductive isolating mechanism appears between the two Fasciola species. Molecular evidence for hybridization was based on the DNA sequence of the internal transcribed spacer 1 (ITS1) region in nuclear ribosomal DNA, which differs between the species. The results suggested that there were not pre-mating but post-mating isolating mechanisms between the two species. However, viable adults of the hybrids F1 and F2 were produced from both parental F. hepatica and F. gigantica. The hybrids inherited phenotypic characteristics such as ratio of body length and width and infectivity to rats from parental Fasciola hepatica and F. gigantica. These findings suggest that reproductive isolation is incomplete between Fasciola hepatica and F. gigantica. Adults of the hybrids F1 and F2 were completely different in mode of reproduction from aspermic Fasciola forms that occur in Asia and seem to be offspring originated from hybridization between F. hepatica and F. gigantica and to reproduce parthenogenetically.

  1. [Oncogenic human papillomaviruses in extra-genital Bowen disease revealed by in situ hybridization].

    Science.gov (United States)

    Derancourt, C; Mougin, C; Chopard Lallier, M; Coumes-Marquet, S; Drobacheff, C; Laurent, R

    2001-01-01

    The association between mucosal oncogenic human papillomaviruses (HPV) and bowenoid papulosis or genital Bowen's disease is well documented. In contrast this association with extra-genital Bowen's disease is poorly studied. The aim of this study was to detect oncogenic (16/18, 31/33/51) and non oncogenic (8/11) mucosal HPV using a in situ hybridization method in 28 skin biopsy specimens of extra-genital Bowen's disease. Twenty-eight cases of extra-genital Bowen's disease seen in the period 1990-96 in the Dermatology department were included: 19 women and 9 men (mean age: 72 years). Bowen's disease locations were: hands and feet (8 cases), limbs (11 cases), face (8 cases), trunk (1 case). Blinded histopathologic examination confirmed the diagnosis of Bowen's disease and signs of HPV infection (koilocytosis). In situ hybridization was performed using three biotinylated probes detecting HPV types 6/11, 16/18, 31/33/51. Oncogenic HPV genoma was detected in 8 skin samples (28.6 p. 100). In all these cases, 16/18 probe was positive and in two cases, both 16/18 and 31/33/51 probes were positive; 4/8 Bowen's diseases of the extremities were positive for HPV. Koilocytes were found in 6/8 of skin samples with positive HPV detection. Mucosal oncogenic HPV are detected by in situ hybridization in 28.6 p. 100 of extra-genital Bowen's disease. In situ hybridization is an easier technique than Southern-Blot hybridization which is the gold standard. Five studies reported similar results and three studies reported different results that we discuss. A precise understanding of oncogenic HPV implication in the development of extra-genital Bowen's disease could lead to the development of new therapeutic strategies (topical cidofovir or imiquimod).

  2. Can a Century Old Experiment Reveal Hidden Properties of Water?

    Directory of Open Access Journals (Sweden)

    Elmar C. Fuchs

    2010-08-01

    Full Text Available In 1893 Sir William Armstrong placed a cotton thread between two wine glasses filled with chemically pure water. After applying a high voltage, a watery connection formed, and after some time, the cotton thread was pulled into one of the glasses, leaving a rope of water suspended between the two glasses. Although being a very simple experiment, it is of special interest since it comprises a number of phenomena currently tackled in modern water science like electrolysis-less charge transport and nanobubbles. This work gives some background information about water research in general and describes the water bridge phenomenon from the viewpoint of different fields such as electrohydrodynamics and quantum field theory. It is shown that the investigation of the floating water bridge led to new discoveries about water, both in the macroscopic and microscopic realm – but these were merely “hidden” in that sense that they only become evident upon application of electric fields.

  3. A Qualitative Experiment: Research on Mediated Meaning Construction Using a Hybrid Approach

    Science.gov (United States)

    Robinson, Sue; Mendelson, Andrew L.

    2012-01-01

    This article presents a hybrid methodological technique that fuses elements of experimental design with qualitative strategies to explore mediated communication. Called the "qualitative experiment," this strategy uses focus groups and in-depth interviews "within" randomized stimulus conditions typically associated with…

  4. Applying TSOI Hybrid Learning Model to Enhance Blended Learning Experience in Science Education

    Science.gov (United States)

    Tsoi, Mun Fie

    2009-01-01

    Purpose: Research on the nature of blended learning and its features has led to a variety of approaches to the practice of blended learning. The purpose of this paper is to provide an alternative practice model, the TSOI hybrid learning model (HLM) to enhance the blended learning experiences in science education. Design/methodology/approach: The…

  5. Neural correlates of the LSD experience revealed by multimodal neuroimaging

    Science.gov (United States)

    Carhart-Harris, Robin L.; Muthukumaraswamy, Suresh; Roseman, Leor; Kaelen, Mendel; Droog, Wouter; Murphy, Kevin; Tagliazucchi, Enzo; Schenberg, Eduardo E.; Nest, Timothy; Orban, Csaba; Leech, Robert; Williams, Luke T.; Williams, Tim M.; Bolstridge, Mark; Sessa, Ben; McGonigle, John; Sereno, Martin I.; Nichols, David; Hobden, Peter; Evans, John; Singh, Krish D.; Wise, Richard G.; Curran, H. Valerie; Feilding, Amanda; Nutt, David J.

    2016-01-01

    Lysergic acid diethylamide (LSD) is the prototypical psychedelic drug, but its effects on the human brain have never been studied before with modern neuroimaging. Here, three complementary neuroimaging techniques: arterial spin labeling (ASL), blood oxygen level-dependent (BOLD) measures, and magnetoencephalography (MEG), implemented during resting state conditions, revealed marked changes in brain activity after LSD that correlated strongly with its characteristic psychological effects. Increased visual cortex cerebral blood flow (CBF), decreased visual cortex alpha power, and a greatly expanded primary visual cortex (V1) functional connectivity profile correlated strongly with ratings of visual hallucinations, implying that intrinsic brain activity exerts greater influence on visual processing in the psychedelic state, thereby defining its hallucinatory quality. LSD’s marked effects on the visual cortex did not significantly correlate with the drug’s other characteristic effects on consciousness, however. Rather, decreased connectivity between the parahippocampus and retrosplenial cortex (RSC) correlated strongly with ratings of “ego-dissolution” and “altered meaning,” implying the importance of this particular circuit for the maintenance of “self” or “ego” and its processing of “meaning.” Strong relationships were also found between the different imaging metrics, enabling firmer inferences to be made about their functional significance. This uniquely comprehensive examination of the LSD state represents an important advance in scientific research with psychedelic drugs at a time of growing interest in their scientific and therapeutic value. The present results contribute important new insights into the characteristic hallucinatory and consciousness-altering properties of psychedelics that inform on how they can model certain pathological states and potentially treat others. PMID:27071089

  6. Neural correlates of the LSD experience revealed by multimodal neuroimaging.

    Science.gov (United States)

    Carhart-Harris, Robin L; Muthukumaraswamy, Suresh; Roseman, Leor; Kaelen, Mendel; Droog, Wouter; Murphy, Kevin; Tagliazucchi, Enzo; Schenberg, Eduardo E; Nest, Timothy; Orban, Csaba; Leech, Robert; Williams, Luke T; Williams, Tim M; Bolstridge, Mark; Sessa, Ben; McGonigle, John; Sereno, Martin I; Nichols, David; Hellyer, Peter J; Hobden, Peter; Evans, John; Singh, Krish D; Wise, Richard G; Curran, H Valerie; Feilding, Amanda; Nutt, David J

    2016-04-26

    Lysergic acid diethylamide (LSD) is the prototypical psychedelic drug, but its effects on the human brain have never been studied before with modern neuroimaging. Here, three complementary neuroimaging techniques: arterial spin labeling (ASL), blood oxygen level-dependent (BOLD) measures, and magnetoencephalography (MEG), implemented during resting state conditions, revealed marked changes in brain activity after LSD that correlated strongly with its characteristic psychological effects. Increased visual cortex cerebral blood flow (CBF), decreased visual cortex alpha power, and a greatly expanded primary visual cortex (V1) functional connectivity profile correlated strongly with ratings of visual hallucinations, implying that intrinsic brain activity exerts greater influence on visual processing in the psychedelic state, thereby defining its hallucinatory quality. LSD's marked effects on the visual cortex did not significantly correlate with the drug's other characteristic effects on consciousness, however. Rather, decreased connectivity between the parahippocampus and retrosplenial cortex (RSC) correlated strongly with ratings of "ego-dissolution" and "altered meaning," implying the importance of this particular circuit for the maintenance of "self" or "ego" and its processing of "meaning." Strong relationships were also found between the different imaging metrics, enabling firmer inferences to be made about their functional significance. This uniquely comprehensive examination of the LSD state represents an important advance in scientific research with psychedelic drugs at a time of growing interest in their scientific and therapeutic value. The present results contribute important new insights into the characteristic hallucinatory and consciousness-altering properties of psychedelics that inform on how they can model certain pathological states and potentially treat others.

  7. Cold atom-ion experiments in hybrid traps

    CERN Document Server

    Härter, Arne

    2013-01-01

    In the last 5 years, a novel field of physics and chemistry has developed in which cold trapped ions and ultracold atomic gases are brought into contact with each other. Combining ion traps with traps for neutral atoms yields a variety of new possibilities for research and experiments. These range from studies of cold atom-ion collisions and atom-ion chemistry to applications in quantum information science and condensed matter related research. In this article we give a brief introduction into this new field and describe some of the perspectives for its future development.

  8. Extended carrier lifetimes and diffusion in hybrid perovskites revealed by Hall effect and photoconductivity measurements

    Science.gov (United States)

    Chen, Y.; Yi, H. T.; Wu, X.; Haroldson, R.; Gartstein, Y. N.; Rodionov, Y. I.; Tikhonov, K. S.; Zakhidov, A.; Zhu, X.-Y.; Podzorov, V.

    2016-08-01

    Impressive performance of hybrid perovskite solar cells reported in recent years still awaits a comprehensive understanding of its microscopic origins. In this work, the intrinsic Hall mobility and photocarrier recombination coefficient are directly measured in these materials in steady-state transport studies. The results show that electron-hole recombination and carrier trapping rates in hybrid perovskites are very low. The bimolecular recombination coefficient (10-11 to 10-10 cm3 s-1) is found to be on par with that in the best direct-band inorganic semiconductors, even though the intrinsic Hall mobility in hybrid perovskites is considerably lower (up to 60 cm2 V-1 s-1). Measured here, steady-state carrier lifetimes (of up to 3 ms) and diffusion lengths (as long as 650 μm) are significantly longer than those in high-purity crystalline inorganic semiconductors. We suggest that these experimental findings are consistent with the polaronic nature of charge carriers, resulting from an interaction of charges with methylammonium dipoles.

  9. Inverse kinematics analysis and numerical control experiment for PRS-XY style hybrid machining tool

    Institute of Scientific and Technical Information of China (English)

    JIA Dongyong; ZHANG Jianmin; NIU Zhigang; SUN Hongchang

    2007-01-01

    This paper analyzed the inverse kinematics for the new Parallel rotate slider-X Y axes(PRS-XY)style hybrid machining tool and educed the five axes linkage inverse kinematics transform formula on the basis of the coordinates of the X,Y,Z,A and B virtual axes.The program for the PRS-XY style hybrid machining tool in accordance with the program manner for the common numerical control(NC)machine tool was made.The results of the experiments prove that the inverse kinematics transform formula is correct.

  10. Artificial plasma cusp generated by upper hybrid instabilities in HF heating experiments at HAARP

    Science.gov (United States)

    Kuo, Spencer; Snyder, Arnold

    2013-05-01

    High Frequency Active Auroral Research Program digisonde was operated in a fast mode to record ionospheric modifications by the HF heating wave. With the O mode heater of 3.2 MHz turned on for 2 min, significant virtual height spread was observed in the heater off ionograms, acquired beginning the moment the heater turned off. Moreover, there is a noticeable bump in the virtual height spread of the ionogram trace that appears next to the plasma frequency (~ 2.88 MHz) of the upper hybrid resonance layer of the HF heating wave. The enhanced spread and the bump disappear in the subsequent heater off ionograms recorded 1 min later. The height distribution of the ionosphere in the spread situation indicates that both electron density and temperature increases exceed 10% over a large altitude region (> 30 km) from below to above the upper hybrid resonance layer. This "mini cusp" (bump) is similar to the cusp occurring in daytime ionograms at the F1-F2 layer transition, indicating that there is a small ledge in the density profile reminiscent of F1-F2 layer transitions. Two parametric processes exciting upper hybrid waves as the sidebands by the HF heating waves are studied. Field-aligned purely growing mode and lower hybrid wave are the respective decay modes. The excited upper hybrid and lower hybrid waves introduce the anomalous electron heating which results in the ionization enhancement and localized density ledge. The large-scale density irregularities formed in the heat flow, together with the density irregularities formed through the parametric instability, give rise to the enhanced virtual height spread. The results of upper hybrid instability analysis are also applied to explain the descending feature in the development of the artificial ionization layers observed in electron cyclotron harmonic resonance heating experiments.

  11. Genetic differences between two Leishmania major-like strains revealed by suppression subtractive hybridization.

    Science.gov (United States)

    Wu, Ângela C A; Freitas, Michelle A R; Silva, Soraia de O; Nogueira, Paula M; Soares, Rodrigo P; Pesquero, João Bosco; Gomes, Maria A; Pesquero, Jorge L; Melo, Maria N

    2015-01-01

    Leishmania major, the causative agent of zoonotic leishmaniasis, is restricted to Old World countries. Molecular and biochemical techniques have been used to identify some L. major-like isolated in South America including Brazil. Here, two L. major-like strains, one virulent (BH49) and one non-virulent (BH121), were subjected to suppression subtractive hybridization (SSH) technique in order to identify differentially expressed genes. SSH technique identified nine cDNA fragments exhibiting high homology to previously sequenced L. major genes. Five cDNAs (four specific for BH49 and one for BH121) were confirmed by RT-PCR. Among those differentially expressed subtracted genes, some were involved in physiological processes including metabolism, translation and destination of proteins, production of energy, virulence factors and unknown functions. Western-blot analysis confirmed a higher expression level of β-1,3-galactosyl residues in L. major-like lipophosphoglycan (LPG). This molecular analysis opens the possibility for identification of potential virulence factors not only in different strains, but also in others species of Leishmania.

  12. Suppression subtractive hybridization reveals differential gene expression in sunflower grown in high P.

    Science.gov (United States)

    Padmanabhan, Priya; Sahi, Shivendra V

    2011-06-01

    Sunflower (Helianthus annuus L.) is a commercially important oilseed crop. Previous studies proved that this crop is a promising plant species for phytoextraction of excess soil phosphorus (P) because of its superior P accumulating characteristics. Suppression subtractive hybridization (SSH) strategy was employed to isolate and characterize genes that are induced in response to high P in this crop. SSH library was prepared using cDNA generated from plants treated with high P as the 'tester'. Based on the results of dot blot analysis, 360 positive cDNA clones were selected from the SSH library for sequencing. A total of 89 non-redundant expressed sequence tags (ESTs) were identified as high P-responsive genes and they were classified into 6 functional groups. Several genes involved in metabolism showed markedly preferential expression in the library. For further confirmation, thirteen of the representative ESTs were selected from all categories for RT-PCR analysis and the results showed up-regulation of these genes in response to high P-treatment. The gene expression data derived from this study suggested that several of the up-regulated genes identified under high P-treatment might be involved in P-accumulation and tolerance in this plant.

  13. Hybridization capture reveals evolution and conservation across the entire Koala retrovirus genome.

    Directory of Open Access Journals (Sweden)

    Kyriakos Tsangaras

    Full Text Available The koala retrovirus (KoRV is the only retrovirus known to be in the midst of invading the germ line of its host species. Hybridization capture and next generation sequencing were used on modern and museum DNA samples of koala (Phascolarctos cinereus to examine ca. 130 years of evolution across the full KoRV genome. Overall, the entire proviral genome appeared to be conserved across time in sequence, protein structure and transcriptional binding sites. A total of 138 polymorphisms were detected, of which 72 were found in more than one individual. At every polymorphic site in the museum koalas, one of the character states matched that of modern KoRV. Among non-synonymous polymorphisms, radical substitutions involving large physiochemical differences between amino acids were elevated in env, potentially reflecting anti-viral immune pressure or avoidance of receptor interference. Polymorphisms were not detected within two functional regions believed to affect infectivity. Host sequences flanking proviral integration sites were also captured; with few proviral loci shared among koalas. Recently described variants of KoRV, designated KoRV-B and KoRV-J, were not detected in museum samples, suggesting that these variants may be of recent origin.

  14. Hybrid Reynolds-Averaged/Large-Eddy Simulations of a Coaxial Supersonic Free-Jet Experiment

    Science.gov (United States)

    Baurle, Robert A.; Edwards, Jack R.

    2010-01-01

    Reynolds-averaged and hybrid Reynolds-averaged/large-eddy simulations have been applied to a supersonic coaxial jet flow experiment. The experiment was designed to study compressible mixing flow phenomenon under conditions that are representative of those encountered in scramjet combustors. The experiment utilized either helium or argon as the inner jet nozzle fluid, and the outer jet nozzle fluid consisted of laboratory air. The inner and outer nozzles were designed and operated to produce nearly pressure-matched Mach 1.8 flow conditions at the jet exit. The purpose of the computational effort was to assess the state-of-the-art for each modeling approach, and to use the hybrid Reynolds-averaged/large-eddy simulations to gather insight into the deficiencies of the Reynolds-averaged closure models. The Reynolds-averaged simulations displayed a strong sensitivity to choice of turbulent Schmidt number. The initial value chosen for this parameter resulted in an over-prediction of the mixing layer spreading rate for the helium case, but the opposite trend was observed when argon was used as the injectant. A larger turbulent Schmidt number greatly improved the comparison of the results with measurements for the helium simulations, but variations in the Schmidt number did not improve the argon comparisons. The hybrid Reynolds-averaged/large-eddy simulations also over-predicted the mixing layer spreading rate for the helium case, while under-predicting the rate of mixing when argon was used as the injectant. The primary reason conjectured for the discrepancy between the hybrid simulation results and the measurements centered around issues related to the transition from a Reynolds-averaged state to one with resolved turbulent content. Improvements to the inflow conditions were suggested as a remedy to this dilemma. Second-order turbulence statistics were also compared to their modeled Reynolds-averaged counterparts to evaluate the effectiveness of common turbulence closure

  15. Real-time biomimetic Central Pattern Generators in an FPGA for hybrid experiments.

    Science.gov (United States)

    Ambroise, Matthieu; Levi, Timothée; Joucla, Sébastien; Yvert, Blaise; Saïghi, Sylvain

    2013-01-01

    This investigation of the leech heartbeat neural network system led to the development of a low resources, real-time, biomimetic digital hardware for use in hybrid experiments. The leech heartbeat neural network is one of the simplest central pattern generators (CPG). In biology, CPG provide the rhythmic bursts of spikes that form the basis for all muscle contraction orders (heartbeat) and locomotion (walking, running, etc.). The leech neural network system was previously investigated and this CPG formalized in the Hodgkin-Huxley neural model (HH), the most complex devised to date. However, the resources required for a neural model are proportional to its complexity. In response to this issue, this article describes a biomimetic implementation of a network of 240 CPGs in an FPGA (Field Programmable Gate Array), using a simple model (Izhikevich) and proposes a new synapse model: activity-dependent depression synapse. The network implementation architecture operates on a single computation core. This digital system works in real-time, requires few resources, and has the same bursting activity behavior as the complex model. The implementation of this CPG was initially validated by comparing it with a simulation of the complex model. Its activity was then matched with pharmacological data from the rat spinal cord activity. This digital system opens the way for future hybrid experiments and represents an important step toward hybridization of biological tissue and artificial neural networks. This CPG network is also likely to be useful for mimicking the locomotion activity of various animals and developing hybrid experiments for neuroprosthesis development.

  16. Real-time biomimetic Central Pattern Generators into FPGA for hybrid experiments

    Directory of Open Access Journals (Sweden)

    Matthieu eAmbroise

    2013-11-01

    Full Text Available This article investigates the neural network system in the leech heartbeat and develops a real-time biomimetic digital hardware using few-resource implementation for hybrid experiments. The leech heartbeat neural network is one of the most simple central pattern generators (CPG. In biology, CPG provide for rhythmic bursts of spikes and is the basis for all muscles contractions orders (heartbeat and locomotion (walking, running….. The leech neural network system was already investigated and this CPG has been already formalized with Hodgkin-Huxley neural model (HH that is the most complex neuron model. However, the resources needed for a neural model is proportional to its complexity. To answer to this issue, this article describes a biomimetic implementation into FPGA (Field Programmable Gate Array of a network of 240 CPGs using a simple model (Izhikevich model and by proposing a new synapse model: activity dependent depression synapse. The architecture of the network implementation allows working on a single computation core. This digital system works in real-time, needs few resources and has the same bursting activity behavior than complex model. To validate our implementation of this CPG, we compare it firstly with a simulation of the complex model. Then we match its activity with the pharmacological data of the activity of the rat’s spinal cord. This digital system allows future hybrid experiments and will be a great step towards hybridation between biological tissue and artificial neural network. This network of CPG could be also useful for mimic the activity of a different animal locomotion or developing hybrid experiments for neuroprosthesis development.

  17. Suppression subtractive hybridization reveals differentially expressed genes in supraspinous ligaments of patients with ankylosing spondylitis.

    Science.gov (United States)

    Zhang, Ying; Hu, Xu; Zhang, Chao; Zhou, Yue; Chu, Tong-Wei

    2015-06-01

    Ankylosing spondylitis (AS) is a severe chronic inflammatory disease that may ultimately result in the development of a 'bamboo‑like' spine. Although the pathological changes that occur in AS have been extensively investigated, the mechanism underlying spinal fusion during AS remains elusive. Differentially expressed genes (DEGs) in paraspinal tissues from patients with AS compared with those from healthy controls were therefore investigated. Polymerase chain reaction (PCR)‑based suppression subtractive hybridization was performed using total mRNA from the supraspinal ligaments of three patients with AS and three patients with spinal fractures as controls. From this, 27 genes were identified in all of the three independent forward libraries, which were defined as DEGs associated with AS. Reverse transcription‑quantitative PCR demonstrated that six DEGs were overexpressed in the tissues from patients with AS compared with those from individuals in the control group, including those encoding transforming growth factor β types I and III receptor, vascular endothelial growth factor, matrix metalloproteinase‑3, core‑binding factor α1 and bone morphogenetic protein 2. Western blot analysis showed increased expression in all six of these proteins in the samples from patients with AS compared with those in the control groups. These findings suggested that changes in the expression of these genes and proteins are associated with the development of spinal fusion during the pathogenesis of AS. Furthermore, these genes may be novel markers of the risk of developing AS, in addition to being targets for the treatment of this disease.

  18. Suppression subtractive hybridization reveals transcript profiling of Chlorella under heterotrophy to photoautotrophy transition.

    Directory of Open Access Journals (Sweden)

    Jianhua Fan

    Full Text Available BACKGROUND: Microalgae have been extensively investigated and exploited because of their competitive nutritive bioproducts and biofuel production ability. Chlorella are green algae that can grow well heterotrophically and photoautotrophically. Previous studies proved that shifting from heterotrophy to photoautotrophy in light-induced environments causes photooxidative damage as well as distinct physiologic features that lead to dynamic changes in Chlorella intracellular components, which have great potential in algal health food and biofuel production. However, the molecular mechanisms underlying the trophic transition remain unclear. METHODOLOGY/PRINCIPAL FINDINGS: In this study, suppression subtractive hybridization strategy was employed to screen and characterize genes that are differentially expressed in response to the light-induced shift from heterotrophy to photoautotrophy. Expressed sequence tags (ESTs were obtained from 770 and 803 randomly selected clones among the forward and reverse libraries, respectively. Sequence analysis identified 544 unique genes in the two libraries. The functional annotation of the assembled unigenes demonstrated that 164 (63.1% from the forward library and 62 (21.8% from the reverse showed significant similarities with the sequences in the NCBI non-redundant database. The time-course expression patterns of 38 selected differentially expressed genes further confirmed their responsiveness to a diverse trophic status. The majority of the genes enriched in the subtracted libraries were associated with energy metabolism, amino acid metabolism, protein synthesis, carbohydrate metabolism, and stress defense. CONCLUSIONS/SIGNIFICANCE: The data presented here offer the first insights into the molecular foundation underlying the diverse microalgal trophic niche. In addition, the results can be used as a reference for unraveling candidate genes associated with the transition of Chlorella from heterotrophy to

  19. Evolution of Wave Energy Deposition Profile in HT-7 Lower Hybrid Current Drive Experiment

    Institute of Scientific and Technical Information of China (English)

    方瑜德; 石跃江; 匡光力; 刘岳修; 沈慰慈; 丁伯江

    2001-01-01

    Lower hybrid waves (LHWs) with a selected n‖ spectrum have been used to control the energy deposition profiles, and then the wave driven current profiles effectively in tokamak discharges. In our lower hybrid current drive experiment in the HT-7 tokamak, it was found that the set-up of the wave energy deposition profile is a graduation process. In the beginning phase of the wave injection duration, the waves (with different n‖ spectra)deposit almost all their energy in the central region of the plasma column, even if their n‖ are very different. Up to around one hundred milliseconds, the wave energy deposition profiles can only take their corresponding shapes according to the n‖ spectra of LHWs. It also shown that this evolution process is affected obviously by the LHW driven current profile, which has been formed early.

  20. Stationary magnetic shear reversal during Lower Hybrid experiments in Tore Supra

    Energy Technology Data Exchange (ETDEWEB)

    Litaudon, X.; Arslanbekov, R.; Hoang, G.T.; Joffrin, E.; Kazarian-Vibert, F.; Moreau, D.; Peysson, Y.; Bibet, P. [Association Euratom-CEA, Centre d`Etudes de Cadarache, 13 - Saint-Paul-lez-Durance (France). Dept. de Recherches sur la Fusion Controlee; Ferron, J.; Kupfer, K. [General Atomics, San Diego, CA (United States)] [and others

    1996-01-01

    Stable and stationary states with hollow current density profiles have been achieved with Lower Hybrid Current Drive (LHCD) during Lower Hybrid (LH) wave accessibility experiments. By analysing the bounded propagation domain in phase space which naturally limits the central penetration and absorption of the waves, off-axis LH power deposition has been realized in a reproducible manner. The resulting current density profile modifications have led to a global confinement enhancement attributed to the formation of an internal `transport barrier` in the central reversed shear region where the electron thermal diffusivity is reduced to its neoclassical collisional level. The multiple-pass LH wave propagation in the weak Landau damping and reversed magnetic shear regime is also investigated in the framework of a statistical theory and the experimental validation of this theory is discussed. (author). 37 refs.

  1. Solution NMR Structure of a Ligand/Hybrid-2-G-Quadruplex Complex Reveals Rearrangements that Affect Ligand Binding.

    Science.gov (United States)

    Wirmer-Bartoschek, Julia; Bendel, Lars Erik; Jonker, Hendrik R A; Grün, J Tassilo; Papi, Francesco; Bazzicalupi, Carla; Messori, Luigi; Gratteri, Paola; Schwalbe, Harald

    2017-06-12

    Telomeric G-quadruplexes have recently emerged as drug targets in cancer research. Herein, we present the first NMR structure of a telomeric DNA G-quadruplex that adopts the biologically relevant hybrid-2 conformation in a ligand-bound state. We solved the complex with a metalorganic gold(III) ligand that stabilizes G-quadruplexes. Analysis of the free and bound structures reveals structural changes in the capping region of the G-quadruplex. The ligand is sandwiched between one terminal G-tetrad and a flanking nucleotide. This complex structure involves a major structural rearrangement compared to the free G-quadruplex structure as observed for other G-quadruplexes in different conformations, invalidating simple docking approaches to ligand-G-quadruplex structure determination. © 2017 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.

  2. Androgen receptor coregulator ARA267-α interacts with death receptor-6 revealed by the yeast two-hybrid

    Institute of Scientific and Technical Information of China (English)

    2004-01-01

    ARA267-αis a newly identified androgen receptor coactivator.In order to further elucidate its precise role in cells,using the ARA267- α fragment containing four PHD and one SET conserved domains as bait we revealed an ARA267-α-PHD-SET-interacting protein,death receptor-6(DR6),in the yeast two-hybrid screening.DR6 is the member of TNF receptor family and has a death domain in its intracellular cytoplasmic portion(DR6cp)to mediate the cell apoptosis.The interaction between ARA267-α-PHD-SET and DR6cp was confirmed in vitro and in vivo.Our finding implied that androgen signaling pathway might cross talk with apoptosis signaling pathway through the interaction between ARA267-α and DR6.

  3. Comparative genomics among Saccharomyces cerevisiae × Saccharomyces kudriavzevii natural hybrid strains isolated from wine and beer reveals different origins

    Science.gov (United States)

    2012-01-01

    Background Interspecific hybrids between S. cerevisiae × S. kudriavzevii have frequently been detected in wine and beer fermentations. Significant physiological differences among parental and hybrid strains under different stress conditions have been evidenced. In this study, we used comparative genome hybridization analysis to evaluate the genome composition of different S. cerevisiae × S. kudriavzevii natural hybrids isolated from wine and beer fermentations to infer their evolutionary origins and to figure out the potential role of common S. kudriavzevii gene fraction present in these hybrids. Results Comparative genomic hybridization (CGH) and ploidy analyses carried out in this study confirmed the presence of individual and differential chromosomal composition patterns for most S. cerevisiae × S. kudriavzevii hybrids from beer and wine. All hybrids share a common set of depleted S. cerevisiae genes, which also are depleted or absent in the wine strains studied so far, and the presence a common set of S. kudriavzevii genes, which may be associated with their capability to grow at low temperatures. Finally, a maximum parsimony analysis of chromosomal rearrangement events, occurred in the hybrid genomes, indicated the presence of two main groups of wine hybrids and different divergent lineages of brewing strains. Conclusion Our data suggest that wine and beer S. cerevisiae × S. kudriavzevii hybrids have been originated by different rare-mating events involving a diploid wine S. cerevisiae and a haploid or diploid European S. kudriavzevii strains. Hybrids maintain several S. kudriavzevii genes involved in cold adaptation as well as those related to S. kudriavzevii mitochondrial functions. PMID:22906207

  4. The hybrid mesons quest: the MesonEx experiment at Jefferson Laboratory

    Energy Technology Data Exchange (ETDEWEB)

    Rizzo, Alessandro [Univ. of Rome Tor Vergata (Italy)

    2016-03-01

    The meson spectroscopy plays nowadays a central role in the investigation of hadron structure thanks to the possible existence of exotic hybrid mesons, quark-antiquark-gluon bound states. Their explicit gluonic degrees of freedom which should clearly emerge from a Partial Wave Analysis (PWA) of the corresponding Dalitz plot of the exotic particle decay, may result in final JPC configurations not allowed in the constituent quark model. Besides this clear signature, hybrid mesons are also expected to have a large particle multiplicity decays, requiring for their search an experimental apparatus with high performances in terms of rate capability, resolution and almost a full acceptance to apply PWA methods. New-generation experiments are planned at Thomas Jefferson National Laboratory (VA, USA) for which an unprecedented statistics of large multiplicity decay events with fully reconstructed kinematics will be available. In particular for the MesonEx (CLAS12) experiment in Hall B, a wide scientific program that will start in 2016 has been deployed to study the meson spectrum at energies up to 11 GeV. A key role in such program is played by the Forward Tagger apparatus of the experiment, which will allow to extend the study of meson electro-production to very low Q2 values, in a quasi-real photo production kinematical region, where the production of hybrid mesons is expected to be favorite. Currently a new analysis framework for the search of the hybrid mesons is being set up by the HASPECT network, an international structure which gather people involved into theoretical and experimental hadronic physics all over the world. The goals of the network is to develop new analysis models and statistical techniques to unfold the signal and background distributions in high-statistics datasets. In this work are briefly presented the first preliminary results from the application of a statistical technique, namely the sPlot, to the data already acquired by the CLAS experiment for

  5. Comparative genomic hybridizations reveal absence of large Streptomyces coelicolor genomic islands in Streptomyces lividans

    Directory of Open Access Journals (Sweden)

    Sherman David H

    2007-07-01

    Full Text Available Abstract Background The genomes of Streptomyces coelicolor and Streptomyces lividans bear a considerable degree of synteny. While S. coelicolor is the model streptomycete for studying antibiotic synthesis and differentiation, S. lividans is almost exclusively considered as the preferred host, among actinomycetes, for cloning and expression of exogenous DNA. We used whole genome microarrays as a comparative genomics tool for identifying the subtle differences between these two chromosomes. Results We identified five large S. coelicolor genomic islands (larger than 25 kb and 18 smaller islets absent in S. lividans chromosome. Many of these regions show anomalous GC bias and codon usage patterns. Six of them are in close vicinity of tRNA genes while nine are flanked with near perfect repeat sequences indicating that these are probable recent evolutionary acquisitions into S. coelicolor. Embedded within these segments are at least four DNA methylases and two probable methyl-sensing restriction endonucleases. Comparison with S. coelicolor transcriptome and proteome data revealed that some of the missing genes are active during the course of growth and differentiation in S. coelicolor. In particular, a pair of methylmalonyl CoA mutase (mcm genes involved in polyketide precursor biosynthesis, an acyl-CoA dehydrogenase implicated in timing of actinorhodin synthesis and bldB, a developmentally significant regulator whose mutation causes complete abrogation of antibiotic synthesis belong to this category. Conclusion Our findings provide tangible hints for elucidating the genetic basis of important phenotypic differences between these two streptomycetes. Importantly, absence of certain genes in S. lividans identified here could potentially explain the relative ease of DNA transformations and the conditional lack of actinorhodin synthesis in S. lividans.

  6. Hybrid Methods Reveal Multiple Flexibly Linked DNA Polymerases within the Bacteriophage T7 Replisome.

    Science.gov (United States)

    Wallen, Jamie R; Zhang, Hao; Weis, Caroline; Cui, Weidong; Foster, Brittni M; Ho, Chris M W; Hammel, Michal; Tainer, John A; Gross, Michael L; Ellenberger, Tom

    2017-01-03

    The physical organization of DNA enzymes at a replication fork enables efficient copying of two antiparallel DNA strands, yet dynamic protein interactions within the replication complex complicate replisome structural studies. We employed a combination of crystallographic, native mass spectrometry and small-angle X-ray scattering experiments to capture alternative structures of a model replication system encoded by bacteriophage T7. Two molecules of DNA polymerase bind the ring-shaped primase-helicase in a conserved orientation and provide structural insight into how the acidic C-terminal tail of the primase-helicase contacts the DNA polymerase to facilitate loading of the polymerase onto DNA. A third DNA polymerase binds the ring in an offset manner that may enable polymerase exchange during replication. Alternative polymerase binding modes are also detected by small-angle X-ray scattering with DNA substrates present. Our collective results unveil complex motions within T7 replisome higher-order structures that are underpinned by multivalent protein-protein interactions with functional implications. Copyright © 2016 Elsevier Ltd. All rights reserved.

  7. Patterns of Limnohabitans microdiversity across a large set of freshwater habitats as revealed by Reverse Line Blot Hybridization.

    Directory of Open Access Journals (Sweden)

    Jan Jezbera

    Full Text Available Among abundant freshwater Betaproteobacteria, only few groups are considered to be of central ecological importance. One of them is the well-studied genus Limnohabitans and mainly its R-BT subcluster, investigated previously mainly by fluorescence in situ hybridization methods. We designed, based on sequences from a large Limnohabitans culture collection, 18 RLBH (Reverse Line Blot Hybridization probes specific for different groups within the genus Limnohabitans by targeting diagnostic sequences on their 16 S-23 S rRNA ITS regions. The developed probes covered in sum 92% of the available isolates. This set of probes was applied to environmental DNA originating from 161 different European standing freshwater habitats to reveal the microdiversity (intra-genus patterns of the Limnohabitans genus along a pH gradient. Investigated habitats differed in various physicochemical parameters, and represented a very broad range of standing freshwater habitats. The Limnohabitans microdiversity, assessed as number of RLBH-defined groups detected, increased significantly along the gradient of rising pH of habitats. 14 out of 18 probes returned detection signals that allowed predictions on the distribution of distinct Limnohabitans groups. Most probe-defined Limnohabitans groups showed preferences for alkaline habitats, one for acidic, and some seemed to lack preferences. Complete niche-separation was indicated for some of the probe-targeted groups. Moreover, bimodal distributions observed for some groups of Limnohabitans, suggested further niche separation between genotypes within the same probe-defined group. Statistical analyses suggested that different environmental parameters such as pH, conductivity, oxygen and altitude influenced the distribution of distinct groups. The results of our study do not support the hypothesis that the wide ecological distribution of Limnohabitans bacteria in standing freshwater habitats results from generalist adaptations of

  8. Gamete production patterns, ploidy, and population genetics reveal evolutionary significant units in hybrid water frogs (Pelophylax esculentus).

    Science.gov (United States)

    Pruvost, Nicolas B M; Hoffmann, Alexandra; Reyer, Heinz-Ulrich

    2013-09-01

    The European water frog Pelophylax esculentus is a natural hybrid between P. lessonae (genotype LL) and P. ridibundus (RR). It reproduces through hybridogenesis, eliminating one parental genome from its germline and producing gametes containing the genome of the other parental species. According to previous studies, this elimination and transmission pattern is very diverse. In mixed populations, where only diploid hybrids (LR) live in sympatry and mate with one or both parental species, the excluded genome varies among regions, and the remaining genome is transmitted clonally to haploid gametes. In all-hybrid populations consisting of diploid (LR) and triploid (LLR and/or LRR) frogs, diploid individuals also produce gametes clonally (1n in males, 2n in females), whereas triploids eliminate the genome they have in single copy and produce haploid gametes containing the recombined other genome. However, here, too, regional differences seem to exist, and some triploids have been reported to produce diploid gametes. In order to systematically study such regional and genotype differences in gamete production, their potential origin, and their consequences for the breeding system, we sampled frogs from five populations in three European countries, performed crossing experiments, and investigated the genetic variation through microsatellite analysis. For four populations, one in Poland, two in Germany, and one in Slovakia, our results confirmed the elimination and transmission pattern described above. In one Slovakian population, however, we found a totally different pattern. Here, triploid males (LLR) produce sperm with a clonally transmitted diploid LL genome, rather than a haploid recombined L genome, and LR females clonally produce haploid R eggs, rather than diploid LR eggs. These differences among the populations in gamete production go along with differences in genomotype composition, breeding system (i.e., the way triploids are produced), and genetic variation

  9. Effort of lower hybrid current drive experiments toward to H-mode in EAST

    Science.gov (United States)

    Ding, B. J.; Li, M. H.; Liu, F. K.; Shan, J. F.; Li, Y. C.; Wang, M.; Liu, L.; Zhao, L. M.; Yang, Y.; Wu, Z. G.; Feng, J. Q.; Hu, H. C.; Jia, H.; Cheng, M.; Zang, Q.; Lyu, B.; Duan, Y. M.; Lin, S. Y.; Wu, J. H.; Hillairet, J.; Ekedahl, A.; Peysson, Y.; Goniche, M.; Tuccillo, A. A.; Cesario, R.; Amicucci, L.; Shen, B.; Gong, X. Z.; Xu, G. S.; Zhao, H. L.; Hu, L. Q.; Li, J. G.; Wan, B. N.; EAST Team

    2017-02-01

    Lower hybrid current drive (LHCD) is an effective tool to achieve high confinement (H-mode) plasma in EAST. To utilize LHCD for accessing H-mode plasma, efforts have been made to improve LHW (lower hybrid wave)-plasma coupling and current drive capability at high density. Improved LHW-plasma coupling by means of local gas puffing and gas puffing from the electron side is routinely used during EAST operation with LHCD. High density experiments suggest that low recycling and high LH frequency are preferred for LHCD experiments at high density, consistent with previous results in other machines. The effect of LHCD on the current profile in EAST demonstrates that it is possible to control the plasma profile by optimizing the LHW spectrum. Repeatable H-mode plasma was obtained by LHCD and the maximum density during H-mode with the combination of 2.45 GHz and 4.6 GHz LH waves was up to 4.5  ×  1019 m-3.

  10. Comparative genomics among Saccharomyces cerevisiae × Saccharomyces kudriavzevii natural hybrid strains isolated from wine and beer reveals different origins

    Directory of Open Access Journals (Sweden)

    Peris David

    2012-08-01

    Full Text Available Abstract Background Interspecific hybrids between S. cerevisiae × S. kudriavzevii have frequently been detected in wine and beer fermentations. Significant physiological differences among parental and hybrid strains under different stress conditions have been evidenced. In this study, we used comparative genome hybridization analysis to evaluate the genome composition of different S. cerevisiae × S. kudriavzevii natural hybrids isolated from wine and beer fermentations to infer their evolutionary origins and to figure out the potential role of common S. kudriavzevii gene fraction present in these hybrids. Results Comparative genomic hybridization (CGH and ploidy analyses carried out in this study confirmed the presence of individual and differential chromosomal composition patterns for most S. cerevisiae × S. kudriavzevii hybrids from beer and wine. All hybrids share a common set of depleted S. cerevisiae genes, which also are depleted or absent in the wine strains studied so far, and the presence a common set of S. kudriavzevii genes, which may be associated with their capability to grow at low temperatures. Finally, a maximum parsimony analysis of chromosomal rearrangement events, occurred in the hybrid genomes, indicated the presence of two main groups of wine hybrids and different divergent lineages of brewing strains. Conclusion Our data suggest that wine and beer S. cerevisiae × S. kudriavzevii hybrids have been originated by different rare-mating events involving a diploid wine S. cerevisiae and a haploid or diploid European S. kudriavzevii strains. Hybrids maintain several S. kudriavzevii genes involved in cold adaptation as well as those related to S. kudriavzevii mitochondrial functions.

  11. A screen for F1 hybrid male rescue reveals no major-effect hybrid lethality loci in the Drosophila melanogaster autosomal genome.

    Science.gov (United States)

    Cuykendall, Tawny N; Satyaki, P; Ji, Shuqing; Clay, Derek M; Edelman, Nathaniel B; Kimchy, Alexandra; Li, Ling-Hei; Nuzzo, Erin A; Parekh, Neil; Park, Suna; Barbash, Daniel A

    2014-10-27

    Hybrid sons between Drosophila melanogaster females and D. simulans males die as 3rd instar larvae. Two genes, D. melanogaster Hybrid male rescue (Hmr) on the X chromosome, and D. simulans Lethal hybrid rescue (Lhr) on chromosome II, interact to cause this lethality. Loss-of-function mutations in either gene suppress lethality, but several pieces of evidence suggest that additional factors are required for hybrid lethality. Here we screen the D. melanogaster autosomal genome by using the Bloomington Stock Center Deficiency kit to search for additional regions that can rescue hybrid male lethality. Our screen is designed to identify putative hybrid incompatibility (HI) genes similar to Hmr and Lhr which, when removed, are dominant suppressors of lethality. After screening 89% of the autosomal genome, we found no regions that rescue males to the adult stage. We did, however, identify several regions that rescue up to 13% of males to the pharate adult stage. This weak rescue suggests the presence of multiple minor-effect HI loci, but we were unable to map these loci to high resolution, presumably because weak rescue can be masked by genetic background effects. We attempted to test one candidate, the dosage compensation gene male specific lethal-3 (msl-3), by using RNA interference with short hairpin microRNA constructs targeted specifically against D. simulans msl-3 but failed to achieve knockdown, in part due to off-target effects. We conclude that the D. melanogaster autosomal genome likely does not contain additional major-effect HI loci. We also show that Hmr is insufficient to fully account for the lethality associated with the D. melanogaster X chromosome, suggesting that additional X-linked genes contribute to hybrid lethality. Copyright © 2014 Cuykendall et al.

  12. A general model of distant hybridization reveals the conditions for extinction in Atlantic salmon and brown trout.

    Directory of Open Access Journals (Sweden)

    Claudio S Quilodrán

    Full Text Available Interspecific hybridization is common in nature but can be increased in frequency or even originated by human actions, such as species introduction or habitat modification, which may threaten species persistence. When hybridization occurs between distantly related species, referred to as "distant hybridization," the resulting hybrids are generally infertile or fertile but do not undergo chromosomal recombination during gametogenesis. Here, we present a model describing this frequent but poorly studied interspecific hybridization to assess its consequences on parental species and to anticipate the conditions under which they can reach extinction. Our general model fully incorporates three important processes: density-dependent competition, dominance/recessivity inheritance of traits and assortative mating. We demonstrate its use and flexibility by assessing population extinction risk between Atlantic salmon and brown trout in Norway, whose interbreeding has recently increased due to farmed fish releases into the wild. We identified the set of conditions under which hybridization may threaten salmonid species. Thanks to the flexibility of our model, we evaluated the effect of an additional risk factor, a parasitic disease, and showed that the cumulative effects dramatically increase the extinction risk. The consequences of distant hybridization are not genetically, but demographically mediated. Our general model is useful to better comprehend the evolution of such hybrid systems and we demonstrated its importance in the field of conservation biology to set up management recommendations when this increasingly frequent type of hybridization is in action.

  13. Death by sex in an Australian icon: a continent-wide survey reveals extensive hybridization between dingoes and domestic dogs.

    Science.gov (United States)

    Stephens, Danielle; Wilton, Alan N; Fleming, Peter J S; Berry, Oliver

    2015-11-01

    Hybridization between domesticated animals and their wild counterparts can disrupt adaptive gene combinations, reduce genetic diversity, extinguish wild populations and change ecosystem function. The dingo is a free-ranging dog that is an iconic apex predator and distributed throughout most of mainland Australia. Dingoes readily hybridize with domestic dogs, and in many Australian jurisdictions, distinct management strategies are dictated by hybrid status. Yet, the magnitude and spatial extent of domestic dog-dingo hybridization is poorly characterized. To address this, we performed a continent-wide analysis of hybridization throughout Australia based on 24 locus microsatellite DNA genotypes from 3637 free-ranging dogs. Although 46% of all free-ranging dogs were classified as pure dingoes, all regions exhibited some hybridization, and the magnitude varied substantially. The southeast of Australia was highly admixed, with 99% of animals being hybrids or feral domestic dogs, whereas only 13% of the animals from remote central Australia were hybrids. Almost all free-ranging dogs had some dingo ancestry, indicating that domestic dogs could have poor survivorship in nonurban Australian environments. Overall, wild pure dingoes remain the dominant predator over most of Australia, but the speed and extent to which hybridization has occurred in the approximately 220 years since the first introduction of domestic dogs indicate that the process may soon threaten the persistence of pure dingoes.

  14. Experiment investigation for dynamic behavior of hybrid fiber effects on reactive powder concrete

    Science.gov (United States)

    Wang, Liwen; Pang, Baojun; Yang, Zhenqi; Chi, Runqiang

    2010-03-01

    The influences of different hybrid fibers (steel fibers add polyvinyl-alcohol fibers) mixture rates for reactive power concrete's (RPC) dynamic mechanical behavior after high temperature burnt was investigated by the Split Hopkinson pressure bar (SHPB) device. A plumbic pulse shaper technique was applied in the experiment, PVDF stress gauge was used to monitor the stress uniformity state within the specimen. The strain rate was between 75~85s-1, base on the stressstrain curves and dynamic modes of concrete specimen, the hybrid fiber effect on the dynamic properties was determined. The results show, dynamic compression strength of specimens which mixed with steel fibers (1.0%,1.5%,2.0% vol. rate) and 0.1% PVA fibers is higher than normal reactive powder concrete (NRPC), but the toughness improves unconspicuous; while strength of the one which has both steel fiber (1.0%,1.5%,2.0% vol. rate) and 0.2%PVA fiber declines than NRPC but the toughness improves and the plastic behaviors strengthened, stress-strain curve has evident rising and plate portions. It can be deduced that the concrete with mixed two kinds of fibers has improved dynamic mechanical properties after high temperature burnt. By compounding previous literature results, the mechanism of the experimental results can be explained.

  15. Improving Health Care Coverage, Equity, And Financial Protection Through A Hybrid System: Malaysia's Experience.

    Science.gov (United States)

    Rannan-Eliya, Ravindra P; Anuranga, Chamara; Manual, Adilius; Sararaks, Sondi; Jailani, Anis S; Hamid, Abdul J; Razif, Izzanie M; Tan, Ee H; Darzi, Ara

    2016-05-01

    Malaysia has made substantial progress in providing access to health care for its citizens and has been more successful than many other countries that are better known as models of universal health coverage. Malaysia's health care coverage and outcomes are now approaching levels achieved by member nations of the Organization for Economic Cooperation and Development. Malaysia's results are achieved through a mix of public services (funded by general revenues) and parallel private services (predominantly financed by out-of-pocket spending). We examined the distributional aspects of health financing and delivery and assessed financial protection in Malaysia's hybrid system. We found that this system has been effective for many decades in equalizing health care use and providing protection from financial risk, despite modest government spending. Our results also indicate that a high out-of-pocket share of total financing is not a consistent proxy for financial protection; greater attention is needed to the absolute level of out-of-pocket spending. Malaysia's hybrid health system presents continuing unresolved policy challenges, but the country's experience nonetheless provides lessons for other emerging economies that want to expand access to health care despite limited fiscal resources.

  16. Study of Lower Hybrid Frequency Turbulence in the Magnetic Reconnection Experiment (MRX)

    Science.gov (United States)

    Dorfman, S. E.; Ji, H.; Roytershteyn, V.; Yamada, M.; Daughton, W. S.; Yoo, J.; Oz, E.; Tharp, T.; Lawrence, E. E.; Myers, C.

    2010-12-01

    One of the key open questions in magnetic reconnection is the nature of the mechanism that governs the reconnection rate in real astrophysical and laboratory systems. Comparisons between fully kinetic 2-D simulations of the Magnetic Reconnection Experiment (MRX) and experimental data indicate that three-dimensional dynamics, such as current layer disruptions recently observed in MRX, may play a key role in resolving an important discrepancy in the reconnection rate and layer width [1,2,3]. These disruptions are often associated with fluctuations in the lower hybrid frequency range and a rapid local reconnection rate. Fluctuations are observed not only in MRX [4], but also in space [5] and 3-D kinetic simulations. Comparison of fluctuation characteristics between the three domains may shed light on the underlying physics. In both the simulation and the experiments, the fluctuations are related to density gradients across the layer. The frequency range is similarly broadband up to the lower hybrid range, and the phase velocities are comparable in appropriately normalized units. However, while the electron drift speed is comparable to the phase velocity at the layer center in the experiment (consistent with previous MRX results [4]), the drift speed in the simulations is considerably larger. Furthermore, the fluctuations observed in the experiment are fully turbulent with correlation lengths the same order as the wavelength while those observed in the simulations and in space are more coherent. Some discharges also display "O-point" signatures consistent with magnetic island like structures. The present research explores the relationship between the disruptions and fluctuations in the context of the reconnection rate problem. Experiments are ongoing to determine what physics is responsible for the broader current layers (and correspondingly smaller drift speeds) observed in the experiment. [1] Y. Ren, et al., Phys. Plasmas 15, 082113 (2008). [2] S. Dorfman, et al

  17. Performance of Hybrids between Weedy Rice and Insect-resistant Transgenic Rice under Field Experiments: Implication for Environmental Biosafety Assessment

    Institute of Scientific and Technical Information of China (English)

    Qian-Jin Cao; Hui Xia; Xiao Yang; Bao-Rong Lu

    2009-01-01

    Transgene escape from genetically modified (GM) rice Into weedy rice via gene flow may cause undesired environmental consequences. Estimating the field performance of crop-weed hybrids will facilitate our understanding of potential introgression of crop genes (including transgenes) into weedy rice populations, allowing for effective biosafety assessment. Comparative studies of three weedy rice strains and their hybrids with two GM rice lines containing different insect-resistance transgenes (CpTl or BtlCpTI) indicated an enhanced relative performance of the crop-weed hybrids, with taller plants, more tillers, panicles, and spikelets per plant, as well as higher 1000-seed weight, compared with the weedy rice parents, although the hybrids produced less filled seeds per plant than their weedy parents. Seeds from the F1 hybrids had higher germination rates and produced more seedlings than the weedy parents, which correlated positively with 1000-seed weight. The crop-weed hybrids demonstrated a generally enhanced relative performance than their weedy rice parents in our field experiments. These findings indicate that transgenes from GM rice can persist to and introgress into weedy rice populations through recurrent crop-to-weed gene flow with the aid of slightly increased relative fitness in F1 hybrids.

  18. Revealing the Earth's mantle from the tallest mountains using the Jinping Neutrino Experiment.

    Science.gov (United States)

    Šrámek, Ondřej; Roskovec, Bedřich; Wipperfurth, Scott A; Xi, Yufei; McDonough, William F

    2016-09-09

    The Earth's engine is driven by unknown proportions of primordial energy and heat produced in radioactive decay. Unfortunately, competing models of Earth's composition reveal an order of magnitude uncertainty in the amount of radiogenic power driving mantle dynamics. Recent measurements of the Earth's flux of geoneutrinos, electron antineutrinos from terrestrial natural radioactivity, reveal the amount of uranium and thorium in the Earth and set limits on the residual proportion of primordial energy. Comparison of the flux measured at large underground neutrino experiments with geologically informed predictions of geoneutrino emission from the crust provide the critical test needed to define the mantle's radiogenic power. Measurement at an oceanic location, distant from nuclear reactors and continental crust, would best reveal the mantle flux, however, no such experiment is anticipated. We predict the geoneutrino flux at the site of the Jinping Neutrino Experiment (Sichuan, China). Within 8 years, the combination of existing data and measurements from soon to come experiments, including Jinping, will exclude end-member models at the 1σ level, define the mantle's radiogenic contribution to the surface heat loss, set limits on the composition of the silicate Earth, and provide significant parameter bounds for models defining the mode of mantle convection.

  19. Revealing the Earth’s mantle from the tallest mountains using the Jinping Neutrino Experiment

    Science.gov (United States)

    Šrámek, Ondřej; Roskovec, Bedřich; Wipperfurth, Scott A.; Xi, Yufei; McDonough, William F.

    2016-09-01

    The Earth’s engine is driven by unknown proportions of primordial energy and heat produced in radioactive decay. Unfortunately, competing models of Earth’s composition reveal an order of magnitude uncertainty in the amount of radiogenic power driving mantle dynamics. Recent measurements of the Earth’s flux of geoneutrinos, electron antineutrinos from terrestrial natural radioactivity, reveal the amount of uranium and thorium in the Earth and set limits on the residual proportion of primordial energy. Comparison of the flux measured at large underground neutrino experiments with geologically informed predictions of geoneutrino emission from the crust provide the critical test needed to define the mantle’s radiogenic power. Measurement at an oceanic location, distant from nuclear reactors and continental crust, would best reveal the mantle flux, however, no such experiment is anticipated. We predict the geoneutrino flux at the site of the Jinping Neutrino Experiment (Sichuan, China). Within 8 years, the combination of existing data and measurements from soon to come experiments, including Jinping, will exclude end-member models at the 1σ level, define the mantle’s radiogenic contribution to the surface heat loss, set limits on the composition of the silicate Earth, and provide significant parameter bounds for models defining the mode of mantle convection.

  20. Relationships between spatio-temporal environmental and genetic variation reveal an important influence of exogenous selection in a pupfish hybrid zone.

    Science.gov (United States)

    Carson, Evan W; Tobler, Michael; Minckley, W L; Ainsworth, Ryan J; Dowling, Thomas E

    2012-03-01

    The importance of exogenous selection in a natural hybrid zone between the pupfishes Cyprinodon atrorus and Cyprinodon bifasciatus was tested via spatio-temporal analyses of environmental and genetic change over winter, spring and summer for three consecutive years. A critical influence of exogenous selection on hybrid zone regulation was demonstrated by a significant relationship between environmental (salinity and temperature) and genetic (three diagnostic nuDNA loci) variation over space and time (seasons) in the Rio Churince system, Cuatro Ciénegas, Mexico. At sites environmentally more similar to parental habitats, the genetic composition of hybrids was stable and similar to the resident parental species, whereas complex admixtures of parental and hybrid genotypic classes characterized intermediate environments, as did the greatest change in allelic and genotypic frequencies across seasons. Within hybrids across the entire Rio Churince system, seasonal changes in allelic and genotypic frequencies were consistent with results from previous reciprocal transplant experiments, which showed C. bifasciatus to suffer high mortality (75%) when exposed to the habitat of C. atrorus in winter (extreme temperature lows and variability) and summer (abrupt salinity change and extreme temperature highs and variability). Although unconfirmed, the distributional limits of C. atrorus and C. atrorus-like hybrids appear to be governed by similar constraints (predation or competition). The argument favouring evolutionary significance of hybridization in animals is bolstered by the results of this study, which links the importance of exogenous selection in a contemporary hybrid zone between C. atrorus and C. bifasciatus to previous demonstration of the long-term evolutionary significance of environmental variation and introgression on the phenotypic diversification Cuatro Ciénegas Cyprinodon. © 2012 Blackwell Publishing Ltd.

  1. TSV last for hybrid pixel detectors: Application to particle physics and imaging experiments

    CERN Document Server

    Henry, D; Berthelot, A; Cuchet, R; Chantre, C; Campbell, M

    Hybrid pixel detectors are now widely used in particle physics experiments and at synchrotron light sources. They have also stimulated growing interest in other fields and, in particular, in medical imaging. Through the continuous pursuit of miniaturization in CMOS it has been possible to increase the functionality per pixel while maintaining or even shrinking pixel dimensions. The main constraint on the more extensive use of the technology in all fields is the cost of module building and the difficulty of covering large areas seamlessly [1]. On another hand, in the field of electronic component integration, a new approach has been developed in the last years, called 3D Integration. This concept, based on using the vertical axis for component integration, allows improving the global performance of complex systems. Thanks to this technology, the cost and the form factor of components could be decreased and the performance of the global system could be enhanced. In the field of radiation imaging detectors the a...

  2. Problems and solutions in high-rate multichannel hybrid photodiode design The CMS experience

    CERN Document Server

    Cushman, P B

    2002-01-01

    The unique conditions of the CMS experiment (4 T magnetic field, restricted access, high neutron radiation, and 25-ns bunch-crossings) necessitated the development of a new type of high-rate multichannel hybrid photodiode for the tile/fiber hadronic calorimeter. New complexities arose in the push toward high-rate operation, necessitating design changes in the diode structure and surface treatment. The product is now capable of high-rate operation with low crosstalk and leakage current. Lifetime studies of high-voltage behavior, total charge, and irradiation have shown that the tubes will survive the ten years of CMS running with only a few percent change in gain and manageable leakage current rise. (13 refs).

  3. Tokamak Fusion Core Experiment: design studies based on superconducting and hybrid toroidal field coils. Design overview

    Energy Technology Data Exchange (ETDEWEB)

    Flanagan, C.A. (ed.)

    1984-10-01

    This document is a design overview that describes the scoping studies and preconceptual design effort performed in FY 1983 on the Tokamak Fusion Core Experiment (TFCX) class of device. These studies focussed on devices with all-superconducting toroidal field (TF) coils and on devices with superconducting TF coils supplemented with copper TF coil inserts located in the bore of the TF coils in the shield region. Each class of device is designed to satisfy the mission of ignition and long pulse equilibrium burn. Typical design parameters are: major radius = 3.75 m, minor radius = 1.0 m, field on axis = 4.5 T, plasma current = 7.0 MA. These designs relay on lower hybrid (LHRH) current rampup and heating to ignition using ion cyclotron range of frequency (ICRF). A pumped limiter has been assumed for impurity control. The present document is a design overview; a more detailed design description is contained in a companion document.

  4. A tapered undulator experiment at the ELBE far infrared hybrid-resonator oscillator free electron laser.

    Science.gov (United States)

    Asgekar, V; Lehnert, U; Michel, P

    2012-01-01

    A tapered undulator experiment was carried out at the ELBE far-infrared free electron laser (FEL). The oscillator FEL makes use of a hybrid optical resonator. The main motivation was to see whether the presence of a dispersive medium in the form of a waveguide in the resonator has any effect on the outcome. The FEL saturated power and the wavelength shifts have been measured as a function of both positive as well as negative undulator field amplitude tapering. In contrast to the typical high-gain FELs where positive tapering proves beneficial for the output power we observed an improvement of performance at negative taper. During the same experiments we studied the characteristics of the detuning curves. The width of the curves indicates a maximum small signal gain for zero taper while the output peak power increases with negative taper. The saturated power output, the detuning curve characteristics, and the wavelength shifts agrees with the theoretical predictions. Details of the experiment are presented.

  5. Development of Yangbajing Air shower Core detector array for a new EAS hybrid Experiment

    CERN Document Server

    Liu, Jinsheng; Chen, Ding; Zhang, Ying; Zhai, Liuming; Chen, Xu; Hu, Xiaobin; Lin, Yuhui; Zhang, Xueyao; Feng, Cunfeng; Jia, Huanyu; Zhou, Xunxiu; DanZengLuoBu,; Chen, Tianlu; Li, Haijin; Liu, Maoyuan; Yuan, Aifang

    2015-01-01

    Aiming at the observation of cosmic-ray chemical composition at the "knee" energy region, we have been developinga new type air-shower core detector (YAC, Yangbajing Air shower Core detector array) to be set up at Yangbajing (90.522$^\\circ$ E, 30.102$^\\circ$ N, 4300 m above sea level, atmospheric depth: 606 g/m$^2$) in Tibet, China. YAC works together with the Tibet air-shower array (Tibet-III) and an underground water cherenkov muon detector array (MD) as a hybrid experiment. Each YAC detector unit consists of lead plates of 3.5 cm thick and a scintillation counter which detects the burst size induced by high energy particles in the air-shower cores. The burst size can be measured from 1 MIP (Minimum Ionization Particle) to $10^{6}$ MIPs. The first phase of this experiment, named "YAC-I", consists of 16 YAC detectors each having the size 40 cm $\\times$ 50 cm and distributing in a grid with an effective area of 10 m$^{2}$. YAC-I is used to check hadronic interaction models. The second phase of the experiment,...

  6. Planning for hybrid-cycle OTEC experiments using the HMTSTA test facility at the Natural Energy Laboratory of Hawaii

    Science.gov (United States)

    Panchal, C.; Rabas, T.; Genens, L.

    The U.S. Department of Energy has built an experimental apparatus for studying the open-cycle Ocean Thermal Energy Conversion (OC-OTEC) system. Experiments using warm and cold seawater are currently underway to validate the performance predictions for an OC-TEC flash evaporator, surface condenser, and direct-contact condenser. The hybrid cycle is another OTEC option that produces both power and desalinated water, it is comparable in capital cost to OC-OTEC, and it eliminates the problems associated with the large steam turbine. Means are presented or modifying the existing apparatus to conduct similar experiments on hybrid-cycle OTEC heat exchangers. These data are required to validate predictive methods of the components and for the system integration that were identified in an earlier study of hybrid-cycle OTEC power plants.

  7. Revealing Fundamental Physics from the Daya Bay Neutrino Experiment using Deep Neural Networks

    CERN Document Server

    Racah, Evan; Sadowski, Peter; Bhimji, Wahid; Tull, Craig; Oh, Sang-Yun; Baldi, Pierre; Prabhat,

    2016-01-01

    Experiments in particle physics produce enormous quantities of data that must be analyzed and interpreted by teams of physicists. This analysis is often exploratory, where scientists are unable to enumerate the possible types of signal prior to performing the experiment. Thus, tools for summarizing, clustering, visualizing and classifying high-dimensional data are essential. In this work, we show that meaningful physical content can be revealed by transforming the raw data into a learned high-level representation using deep neural networks, with measurements taken at the Daya Bay Neutrino Experiment as a case study. We further show how convolutional deep neural networks can provide an effective classification filter with greater than 97% accuracy across different classes of physics events, significantly better than other machine learning approaches.

  8. Investigating the Inverse Square Law with the Timepix Hybrid Silicon Pixel Detector: A CERN [at] School Demonstration Experiment

    Science.gov (United States)

    Whyntie, T.; Parker, B.

    2013-01-01

    The Timepix hybrid silicon pixel detector has been used to investigate the inverse square law of radiation from a point source as a demonstration of the CERN [at] school detector kit capabilities. The experiment described uses a Timepix detector to detect the gamma rays emitted by an [superscript 241]Am radioactive source at a number of different…

  9. Can Quick Release Experiments Reveal the Muscle Structure? A Bionic Approach

    Institute of Scientific and Technical Information of China (English)

    D. F. B. Haeufle; M. Günther; R. Blickhan; S. Schmitt

    2012-01-01

    The goal of this study was to understand the macroscopic mechanical structure and function of biological muscle with respect to its dynamic role in the contraction.A recently published muscle model,deriving the hyperbolic force-velocity relation from first-order mechanical principles,predicts different force-velocity operating points for different load situations.With anew approach,this model could be simplified and thus,transferred into a numerical simulation and a hardware experiment.Two types of quick release experiments were performed in simulation and with the hardware setup,which represent two extreme cases of the contraction dynamics:against a constant force (isotonic) and against an inertial mass.Both experiments revealed hyperbolic or hyperbolic-like force-velocity relations.Interestingly,the analytical model not only predicts these extreme cases,but also additionally all contraction states in between.It was possible to validate these predictions with the numerical model and the hardware experiment.These results prove that the origin of the hyperbolic force-velocity relation can be mechanically explained on a macroscopic level by the dynamical interaction of three mechanical elements.The implications for the interpretation of biological muscle experiments and the realization of muscle-like bionic actuators are discussed.

  10. Genetic introgression and hybridization in Antillean freshwater turtles (Trachemys) revealed by coalescent analyses of mitochondrial and cloned nuclear markers.

    Science.gov (United States)

    Parham, James F; Papenfuss, Theodore J; Dijk, Peter Paul van; Wilson, Byron S; Marte, Cristian; Schettino, Lourdes Rodriguez; Brian Simison, W

    2013-04-01

    Determining whether a conflict between gene trees and species trees represents incomplete lineage sorting (ILS) or hybridization involving native and/or invasive species has implications for reconstructing evolutionary relationships and guiding conservation decisions. Among vertebrates, turtles represent an exceptional case for exploring these issues because of the propensity for even distantly related lineages to hybridize. In this study we investigate a group of freshwater turtles (Trachemys) from a part of its range (the Greater Antilles) where it is purported to have undergone reticulation events from both natural and anthropogenic processes. We sequenced mtDNA for 83 samples, sequenced three nuDNA markers for 45 samples, and cloned 29 polymorphic sequences, to identify species boundaries, hybridization, and intergrade zones for Antillean Trachemys and nearby mainland populations. Initial coalescent analyses of phased nuclear alleles (using (*)BEAST) recovered a Bayesian species tree that strongly conflicted with the mtDNA phylogeny and traditional taxonomy, and appeared to be confounded by hybridization. Therefore, we undertook exploratory phylogenetic analyses of mismatched alleles from the "coestimated" gene trees (Heled and Drummond, 2010) in order to identify potential hybrid origins. The geography, morphology, and sampling context of most samples with potential introgressed alleles suggest hybridization over ILS. We identify contact zones between different species on Jamaica (T. decussata × T. terrapen), on Hispaniola (T. decorata × T. stejnegeri), and in Central America (T. emolli × T. venusta). We are unable to determine whether the distribution of T. decussata on Jamaica is natural or the result of prehistoric introduction by Native Americans. This uncertainty means that the conservation status of the Jamaican T. decussata populations and contact zone with T. terrapen are unresolved. Human-mediated dispersal events were more conclusively implicated

  11. Simultaneous in situ hybridization for DNA and RNA reveals the presence of HPV in the majority of cervical cancer cells.

    Science.gov (United States)

    D'Amato, L; Pilotti, S; Longoni, A; Donghi, R; Rilke, F

    1992-02-01

    Thirteen cases of invasive squamous cell carcinoma of the uterine cervix containing HPV types 16 or 18 DNA sequences, as detected by Southern blot analysis, were investigated by in situ hybridization on routine paraffin sections, using 35S nick-translated DNA probes. Simultaneous in situ hybridization for DNA and RNA showed that in ten out of 13 cases (77%) the percentage of tumor cells containing HPV 16 or 18 varied from 75 to 100%. In one case, harboring both in situ and invasive carcinoma, the same type of HPV DNA was detected in both components. This finding suggests that neoplastic cells retained the viral genome during progression to invasiveness.

  12. Can quantum gravity be exposed in the laboratory?: A tabletop experiment to reveal the quantum foam

    CERN Document Server

    Bekenstein, Jacob D

    2013-01-01

    I propose an experiment that may be performed, with present low temperature and cryogenic technology, to reveal Wheeler's quantum foam. It involves coupling an optical photon's momentum to the center of mass motion of a macroscopic transparent block with parameters such that the latter is displaced in space by approximately a Planck length. I argue that such displacement is sensitive to quantum foam and will react back on the photon's probability of transiting the block. This might allow determination of the precise scale at which quantum fluctuations of space-time become large, and so differentiate between the brane-world and the traditional scenarios of spacetime.

  13. Experiments Are Revealing a Foundation Species: A Case Study of Eastern Hemlock (Tsuga canadensis

    Directory of Open Access Journals (Sweden)

    Aaron M. Ellison

    2014-01-01

    Full Text Available Foundation species are species that create and define particular ecosystems; control in large measure the distribution and abundance of associated flora and fauna; and modulate core ecosystem processes, such as energy flux and biogeochemical cycles. However, whether a particular species plays a foundational role in a system is not simply asserted. Rather, it is a hypothesis to be tested, and such tests are best done with large-scale, long-term manipulative experiments. The utility of such experiments is illustrated through a review of the Harvard Forest Hemlock Removal Experiment (HF-HeRE, a multidecadal, multihectare experiment designed to test the foundational role of eastern hemlock, Tsuga canadensis, in eastern North American forests. Experimental removal of T. canadensis has revealed that after 10 years, this species has pronounced, long-term effects on associated flora and fauna, but shorter-term effects on energy flux and nutrient cycles. We hypothesize that on century-long scales, slower changes in soil microbial associates will further alter ecosystem processes in T. canadensis stands. HF-HeRE may indeed continue for >100 years, but at such time scales, episodic disturbances and changes in regional climate and land cover can be expected to interact in novel ways with these forests and their foundation species.

  14. Structural evolution beneath Sakurajima Volcano, Japan, revealed through rounds of controlled seismic experiments

    Science.gov (United States)

    Tsutsui, Tomoki; Iguchi, Masato; Tameguri, Takeshi; Nakamichi, Haruhisa

    2016-04-01

    Structural evolution beneath an active volcano is detected as the variation of seismic reflectivity through controlled seismic experiments, which is interpreted as being associated with discharging magma. The target of the present study is Sakurajima Volcano, which is one of the most active volcanoes in Japan. Six rounds of seismic experiments with controlled sources have been conducted annually at the volcano. Two seismic reflection profiles are obtained from the datasets for each successful round of experiments. The experiments reveal clear annual variation in seismic reflectivity at a depth of 6.2 km in the northeastern part of Sakurajima. The reflectivity is maximum in December 2009 upon the first intrusion of magma and decreases gradually until December 2013, which coincides with the inflation and deflation cycle of Sakurajima Volcano. Reflectivity variation occurred in the embedded clear reflector at depth. An evolving sandwiched structure in the intermediate layer is used as the reflector model. Lower-velocity magma embedded in the intermediate layer and its succeeding velocity increment explain the variation range of reflectivity. This is interpreted as a temperature decrease associated with discharging magma at depth. The present study describes a new approach for instantaneously sensing magma properties and for monitoring active volcanoes.

  15. Reproduction experiment on Austropotamobius pallipes complex under controlled conditions: Can hybrids be hatched?

    Directory of Open Access Journals (Sweden)

    Ghia D.

    2011-07-01

    Full Text Available The Austropotamobius pallipes complex is formed by the two species A. pallipes and A. italicus, recently defined only on genetic basis, without obvious morphological features for their differentiation. Dealing with this problem, we have conducted a breeding experiment between these two presumed species under controlled conditions, in order to investigate the possible existence of reproductive barriers. Using 80 breeders (56 females and 24 males collected from populations where their species identity was genetically well established, we performed four series of trials: Fita × Mpal and Fpal × Mita interspecific mating; Fita × Mita and Fpal × Mpal intraspecific mating as a control. We have monitored only the main phases of the reproduction in order to avoid excessive interference for the crayfish. In November 2009 the 91.7% of females having intraspecific mating, as well as the 100% of females having interspecific mating, produced eggs. In June 2010 the eggs from the 36.4% of females having intraspecific mating, and those from the 42.3% of females having interspecific mating did hatch. We emphasize the hatching of hybrids and their vitality.

  16. Lower hybrid current drive experiments on Alcator C-Mod: Comparison with theory and simulationa)

    Science.gov (United States)

    Bonoli, P. T.; Ko, J.; Parker, R.; Schmidt, A. E.; Wallace, G.; Wright, J. C.; Fiore, C. L.; Hubbard, A. E.; Irby, J.; Marmar, E.; Porkolab, M.; Terry, D.; Wolfe, S. M.; Wukitch, S. J.; Alcator C-Mod Team; Wilson, J. R.; Scott, S.; Valeo, E.; Phillips, C. K.; Harvey, R. W.

    2008-05-01

    Lower hybrid (LH) current drive experiments have been carried out on the Alcator C-Mod tokamak [I. H. Hutchinson et al., Phys. Plasmas 1, 1511 (1994)] using a radio-frequency system at 4.6GHz. Up to 900kW of LH power has been coupled and driven LH currents have been inferred from magnetic measurements by extrapolating to zero loop voltage, yielding an efficiency of neILHR0/PLH≈2.5±0.2×1019(A/W/m2). We have simulated the LH current drive in these discharges using the combined ray tracing/three-dimensional (r,v⊥,v∥) Fokker-Planck code GENRAY-CQL3D (R. W. Harvey and M. McCoy, in Proceedings of the IAEA Technical Committee Meeting on Simulation and Modeling of Thermonuclear Plasmas, Montreal, Canada, 1992) and found similar current drive efficiencies. The simulated profiles of current density from CQL3D, including both ohmic plus LH drive have been found to be in good agreement with the measured current density from a motional Stark effect diagnostic. Measurements of nonthermal x-ray emission confirm the presence of a significant fast electron population and the three-dimensional (r,v⊥,v∥) electron distribution function from CQL3D has been used in a synthetic diagnostic code to simulate the measured hard x-ray data.

  17. Hadronic- and electromagnetic cores of air-showers observed by hybrid experiments at high mountains

    CERN Document Server

    Tamada, M

    2010-01-01

    Characteristics of the high energy families (bundle of high energy e, gamma) and hadrons in the air-showers detected in the hybrid experiment together with emulsion chamber and AS-array at Mt.Chacaltaya are studied in detail by comparing with those of CORSIKA simulations using interaction models of QGSJET and EPOS. Because the atmospheric families and hadron component have more direct information of the nuclear interaction, correlations between atmospheric families and burst (hadron component of air-showers) accompanied to air-showers are more sensitive to the mechanism of the the cosmic-ray interactions. The burst size dependence of the family energy is compared with those of simulations. It is found that the family energy accompanied by the air-showers with the larger burst-size is systematically smaller than that expected in the simulated events. The experimental results can not be described simply by changing the chemical composition of primary cosmic-rays and this indicates that the x-distribution of sec...

  18. Design and implementation of a multichannel millimeter wave interferometer for the Compact Toroidal Hybrid experiment

    Energy Technology Data Exchange (ETDEWEB)

    Miller, M. C.; Hanson, J. D.; Hartwell, G. J.; Knowlton, S. F.; Maurer, D. A.; Stevenson, B. A. [Physics Department, Auburn University, Auburn, Alabama 36849 (United States)

    2012-10-15

    A three-channel 1 mm wave interferometer has been designed, assembled, and installed on the Compact Toroidal Hybrid torsatron (CTH). The interferometer design makes novel use of a subharmonic mixer for detection, which simplifies alignment. It employs a single electronically tunable source that is repetitively chirped using a sawtooth waveform of frequency up to 1 MHz. The 15.25 GHz drive oscillator is multiplied in two stages to 122 GHz before a final doubler stage brings it to 244 GHz. Local oscillator (LO) power at 122 GHz is directed through waveguide to the LO input of the subharmonic mixer of each viewing chord, simplifying alignment. Phase detection is performed by directly digitizing the amplified mixer outputs at 50 MHz and processing them with a software algorithm. Initial measurements made with the central chord of the new interferometer agree with those from the existing 4 mm system at low densities. The 1 mm system performs well in current-driven discharges reaching densities over 10{sup 19} m{sup -3}, whereas the lower frequency interferometer is found to be less reliable due to loss of fringes. This is a critical improvement for experiments studying the onset, avoidance, and vacuum magnetic transform dependence of disruptions in the CTH device.

  19. Data Analysis for the NASA/Boeing Hybrid Laminar Flow Control Crossflow Experiment

    Science.gov (United States)

    Eppink, Jenna L.; Wlezien, Richard

    2011-01-01

    The Hybrid-Laminar Flow Control (HLFC) Crossflow Experiment, completed in 1995. generated a large database of boundary layer stability and transition data that was only partially analyzed before data analysis was abruptly ended in the late 1990's. Renewed interest in laminar flow technologies prompted additional data analysis, to integrate all data, including some post-test roughness and porosity measurements. The objective is to gain new insights into the effects of suction on boundary layer stability. A number of challenges were encountered during the data analysis, and their solutions are discussed in detail. They include the effect of the probe vibration, the effect of the time-varying surface temperature on traveling crossflow instabilities, and the effect of the stationary crossflow modes on the approximation of wall location. Despite the low turbulence intensity of the wind tunnel (0.01 to 0.02%), traveling crosflow disturbances were present in the data, in some cases at amplitudes up to 1% of the freestream velocity. However, the data suggests that transition was dominated by stationary crossflow. Traveling crossflow results and stationary data in the presence of suction are compared with linear parabolized stability equations results as a way of testing the quality of the results.

  20. An investigation on hybrid interface using on-line monitoring experiment and finite element analyses

    NARCIS (Netherlands)

    Truong, H.T.X.; Martinez, M.J.; Ochoa, O.O.; Lagoudas, D.C.

    2015-01-01

    In this work, the hybrid interface between metal and thermosetting polymer matrix composite was studied via experimental and numerical investigations. Hybrid laminates, whose constituents are aluminum foil, carbon fabric and epoxy matrix, were manufactured using the vacuum assisted resin transfer mo

  1. Towards a holistic assessment of the user experience with hybrid BCIs

    Science.gov (United States)

    Lorenz, Romy; Pascual, Javier; Blankertz, Benjamin; Vidaurre, Carmen

    2014-06-01

    Objective. In recent years, brain-computer interfaces (BCIs) have become mature enough to immensely benefit from the expertise and tools established in the field of human-computer interaction (HCI). One of the core objectives in HCI research is the design of systems that provide a pleasurable user experience (UX). While the majority of BCI studies exclusively evaluate common efficiency measures such as classification accuracy and speed, single research groups have begun to look at further usability aspects such as ease of use, workload and learnability. However, these evaluation metrics only cover pragmatic aspects of UX while still not considering the hedonic quality of UX. In order to gain a holistic perspective on UX, hedonic quality aspects such as motivation and frustration were also taken into account for our evaluation of three BCI-driven interfaces, which were proposed to be used as a two-stage neuroprosthetic control within the EU project MUNDUS. Approach. At the first stage, one of six possible actions was selected and either confirmed or cancelled at the second stage. For the experiment, a solely event-related-potential-based interface (ERP-ERP) and two hybrid solutions were tested that were controlled by ERP and motor imagery (MI)—resulting in the two possible combinations: ERP selection/MI confirmation (ERP-MI) or MI selection/ERP confirmation (MI-ERP). Behavioural, subjective and encephalographic (EEG) data of 12 healthy subjects were collected during an online experiment with the three graphical user interfaces (GUIs). Main results. Results showed a significantly greater pragmatic quality (in terms of accuracy, efficiency, workload, use quality and learnability) for the ERP-ERP and ERP-MI GUIs in contrast to the MI-ERP GUI. Consequently, the MI-ERP GUI is least suited for use as a neuroprosthetic control. With respect to the comparison of the ERP-ERP and ERP-MI GUIs, no significant differences in pragmatic and hedonic quality of UX were found

  2. Towards a holistic assessment of the user experience with hybrid BCIs.

    Science.gov (United States)

    Lorenz, Romy; Pascual, Javier; Blankertz, Benjamin; Vidaurre, Carmen

    2014-06-01

    In recent years, brain-computer interfaces (BCIs) have become mature enough to immensely benefit from the expertise and tools established in the field of human-computer interaction (HCI). One of the core objectives in HCI research is the design of systems that provide a pleasurable user experience (UX). While the majority of BCI studies exclusively evaluate common efficiency measures such as classification accuracy and speed, single research groups have begun to look at further usability aspects such as ease of use, workload and learnability. However, these evaluation metrics only cover pragmatic aspects of UX while still not considering the hedonic quality of UX. In order to gain a holistic perspective on UX, hedonic quality aspects such as motivation and frustration were also taken into account for our evaluation of three BCI-driven interfaces, which were proposed to be used as a two-stage neuroprosthetic control within the EU project MUNDUS. At the first stage, one of six possible actions was selected and either confirmed or cancelled at the second stage. For the experiment, a solely event-related-potential-based interface (ERP-ERP) and two hybrid solutions were tested that were controlled by ERP and motor imagery (MI)--resulting in the two possible combinations: ERP selection/MI confirmation (ERP-MI) or MI selection/ERP confirmation (MI-ERP). Behavioural, subjective and encephalographic (EEG) data of 12 healthy subjects were collected during an online experiment with the three graphical user interfaces (GUIs). Results showed a significantly greater pragmatic quality (in terms of accuracy, efficiency, workload, use quality and learnability) for the ERP-ERP and ERP-MI GUIs in contrast to the MI-ERP GUI. Consequently, the MI-ERP GUI is least suited for use as a neuroprosthetic control. With respect to the comparison of the ERP-ERP and ERP-MI GUIs, no significant differences in pragmatic and hedonic quality of UX were found. Since throughout better results were

  3. Broadband sidebands generated by parametric instability in lower hybrid current drive experiments on EAST

    Energy Technology Data Exchange (ETDEWEB)

    Amicucci, L., E-mail: luca.amicucci@enea.it; Castaldo, C.; Cesario, R.; Giovannozzi, E.; Tuccillo, A. A. [EUROfusion-ENEA, Centro Ricerche Frascati, Unità Fusione, Frascati (Italy); Ding, B. J.; Li, M. H. [Institute of Plasma Physics, Chinese Academy of Sciences, Hefei 230031 (China)

    2015-12-10

    Modern research on nuclear fusion energy, based on the tokamak concept, has strong need of tools for actively driving non-inductive current especially at the periphery of plasma column, where tools available so far have poor efficiency. This is essential for solving one of the most critical problems for thermonuclear reactor, consisting in how to achieve the figure of fusion gain in the context of sufficient stability. The lower hybrid current drive (LHCD) effect has the potential capability of driving current at large radii of reactor plasma with high efficiency [1]. Experiments recently carried out on EAST showed that a strong activity of LH sideband waves (from the RF probe spectra), accompanied by weak core penetration of the coupled LH power, is present when operating at relatively high plasma densities. Previous theoretical results, confirmed by experiments on FTU, showed that the LH sideband phenomenon is produced by parametric instability (PI), which are mitigated by higher plasma edge temperatures. This condition is thus useful for enabling the LH power propagation when operating with profiles having high plasma densities even at the edge. In the present work, we show new PI modeling of EAST plasmas data, obtained in condition of higher plasma edge temperature due to chamber lithisation. The obtained trend of the PI frequencies and growth rates is consistent with data of RF probe spectra, available in different regimes of lithisated and not lithisated vessel. Moreover, these spectra are interpreted as PI effect occurring at the periphery of plasma column, however in the low field side where the LH power is coupled.

  4. Broadband sidebands generated by parametric instability in lower hybrid current drive experiments on EAST

    Science.gov (United States)

    Amicucci, L.; Ding, B. J.; Castaldo, C.; Cesario, R.; Giovannozzi, E.; Li, M. H.; Tuccillo, A. A.

    2015-12-01

    Modern research on nuclear fusion energy, based on the tokamak concept, has strong need of tools for actively driving non-inductive current especially at the periphery of plasma column, where tools available so far have poor efficiency. This is essential for solving one of the most critical problems for thermonuclear reactor, consisting in how to achieve the figure of fusion gain in the context of sufficient stability. The lower hybrid current drive (LHCD) effect has the potential capability of driving current at large radii of reactor plasma with high efficiency [1]. Experiments recently carried out on EAST showed that a strong activity of LH sideband waves (from the RF probe spectra), accompanied by weak core penetration of the coupled LH power, is present when operating at relatively high plasma densities. Previous theoretical results, confirmed by experiments on FTU, showed that the LH sideband phenomenon is produced by parametric instability (PI), which are mitigated by higher plasma edge temperatures. This condition is thus useful for enabling the LH power propagation when operating with profiles having high plasma densities even at the edge. In the present work, we show new PI modeling of EAST plasmas data, obtained in condition of higher plasma edge temperature due to chamber lithisation. The obtained trend of the PI frequencies and growth rates is consistent with data of RF probe spectra, available in different regimes of lithisated and not lithisated vessel. Moreover, these spectra are interpreted as PI effect occurring at the periphery of plasma column, however in the low field side where the LH power is coupled.

  5. Genomewide mapping reveals a combination of different genetic effects causing the genetic basis of heterosis in two elite rice hybrids

    Indian Academy of Sciences (India)

    Lanzhi Li; Xiaohong He; Hongyan Zhang; Zhiming Wang; Congwei Sun; Tongmin Mou; Xinqi Li; Yuanming Zhang; Zhongli Hu

    2015-06-01

    North Carolina design III (NCIII) is one of the most powerful and widely used mating designs for understanding the genetic basis of heterosis. However, the quantitative trait mapping (QTL) conducted in previous studies with this design was mainly based on analysis of variance (ANOVA), composite interval or multiple interval mapping methods. These methodologies could not investigate all kinds of genetic effects, especially epistatic effects, simultaneously on the whole genome. In this study, with a statistical method for mapping epistatic QTL associated with heterosis using the recombinant inbred line (RIL)-based NCIII design, we conducted QTL mapping for nine agronomic traits of two elite hybrids to characterize the mode of gene action contributing to heterosis on a whole genomewide scale. In total, 23 main-effect QTL (M-QTL) and 23 digenic interactions in IJ (indica × japonica) hybrids, 11 M-QTL and 82 digenic interactions in II (indica × indica) hybrid QTLs were identified in the present study. The variation explained by individual M-QTL or interactions ranged from 2.3 to 11.0%. The number of digenic interactions and the total variation explained by interactions of each trait were larger than those of M-QTL. The augmented genetic effect ratio of most M-QTL and digenic interactions in (L1–L2) data of two backcross populations (L1 and L2) showed complete dominance or overdominance, and in (L1 + L2) data showed an additive effect. Our results indicated that the dominance, overdominance and epistatic effect were important in conditioning the genetic basis of heterosis of the two elite hybrids. The relative contributions of the genetic components varied with traits and the genetic basis of the two hybrids was different.

  6. Genomewide mapping reveals a combination of different genetic effects causing the genetic basis of heterosis in two elite rice hybrids.

    Science.gov (United States)

    Li, Lanzhi; He, Xiaohong; Zhang, Hongyan; Wang, Zhiming; Sun, Congwei; Mou, Tongmin; Li, Xinqi; Zhang, Yuanming; Hu, Zhongli

    2015-06-01

    North Carolina design III (NCIII) is one of the most powerful and widely used mating designs for understanding the genetic basis of heterosis. However, the quantitative trait mapping (QTL) conducted in previous studies with this design was mainly based on analysis of variance (ANOVA), composite interval or multiple interval mapping methods. These methodologies could not investigate all kinds of genetic effects, especially epistatic effects, simultaneously on the whole genome. In this study, with a statistical method for mapping epistatic QTL associated with heterosis using the recombinant inbred line (RIL)-based NCIII design, we conducted QTL mapping for nine agronomic traits of two elite hybrids to characterize the mode of gene action contributing to heterosis on a whole genomewide scale. In total, 23 main-effect QTL (M-QTL) and 23 digenic interactions in IJ (indica x japonica) hybrids, 11 M-QTL and 82 digenic interactions in II (indica x indica) hybrid QTLs were identified in the present study. The variation explained by individual M-QTL or interactions ranged from 2.3 to 11.0%. The number of digenic interactions and the total variation explained by interactions of each trait were larger than those of M-QTL. The augmented genetic effect ratio of most M-QTL and digenic interactions in (L1 - L2) data of two backcross populations (L1 and L2) showed complete dominance or overdominance, and in (L1 + L2) data showed an additive effect. Our results indicated that the dominance, overdominance and epistatic effect were important in conditioning the genetic basis of heterosis of the two elite hybrids. The relative contributions of the genetic components varied with traits and the genetic basis of the two hybrids was different.

  7. Synthesis of Ag-ZnO core-shell hybrid nanostructures: an optical approach to reveal the growth mechanism

    Energy Technology Data Exchange (ETDEWEB)

    Encina, Ezequiel R.; Perez, Manuel A.; Coronado, Eduardo A., E-mail: coronado@fcq.unc.edu.ar [Universidad Nacional de Cordoba, Departamento de Fisicoquimica, Facultad de Ciencias Quimicas, INFIQC (Argentina)

    2013-06-15

    In this study, Ag-ZnO core-shell hybrid nanostructures (HNs) have been prepared by means of a very simple chemical methodology. In addition, their morphology and extinction properties have been characterized. It was found that the HNs consist in almost spherical Ag nanoparticle cores (mean diameter 56 nm) surrounded by a thin shell formed by small ZnO nanoparticles (mean size 6 nm). The changes in the extinction spectra during the formation of the hybrid nanostructures have been rationalized using electrodynamics simulations applying Mie theory for coated spheres along with the effective medium theory to describe the dielectric constant of the shell. By assuming a formation and growth mechanism of the shell, it was found that these simulations describe not only qualitatively but also quantitatively the changes in the extinction spectra.

  8. Proteomic Analysis Reveals Different Involvement of Embryo and Endosperm Proteins during Aging of Yliangyou 2 Hybrid Rice Seeds

    Science.gov (United States)

    Zhang, Ying-Xue; Xu, Heng-Heng; Liu, Shu-Jun; Li, Ni; Wang, Wei-Qing; Møller, Ian M.; Song, Song-Quan

    2016-01-01

    Seed aging is a process that results in a delayed germination, a decreased germination percentage, and finally a total loss of seed viability. However, the mechanism of seed aging is poorly understood. In the present study, Yliangyou 2 hybrid rice (Oryza sativa L.) seeds were artificially aged at 100% relative humidity and 40°C, and the effect of artificial aging on germination, germination time course and the change in protein profiles of embryo and endosperm was studied to understand the molecular mechanism behind seed aging. With an increasing duration of artificial aging, the germination percentage and germination rate of hybrid rice seeds decreased. By comparing the protein profiles from the seeds aged for 0, 10 and 25 days, a total of 91 and 100 protein spots were found to show a significant change of more than 2-fold (P cell defense and rescue (28%), and with storage protein (18%). In endosperms, most of the identified proteins were involved in metabolism (37%), in energy (27%), and in protein synthesis and destination (11%). The most marked change was the increased abundance of many glycolytic enzymes together with the two fermentation enzymes pyruvate decarboxylase and alcohol dehydrogenase in the embryos during aging. We hypothesize that the decreased viability of hybrid rice seeds during artificial aging is caused by the development of hypoxic conditions in the embryos followed by ethanol accumulation.

  9. Next-generation sequencing analysis of lager brewing yeast strains reveals the evolutionary history of interspecies hybridization.

    Science.gov (United States)

    Okuno, Miki; Kajitani, Rei; Ryusui, Rie; Morimoto, Hiroya; Kodama, Yukiko; Itoh, Takehiko

    2016-02-01

    The lager beer yeast Saccharomyces pastorianus is considered an allopolyploid hybrid species between S. cerevisiae and S. eubayanus. Many S. pastorianus strains have been isolated and classified into two groups according to geographical origin, but this classification remains controversial. Hybridization analyses and partial PCR-based sequence data have indicated a separate origin of these two groups, whereas a recent intertranslocation analysis suggested a single origin. To clarify the evolutionary history of this species, we analysed 10 S. pastorianus strains and the S. eubayanus type strain as a likely parent by Illumina next-generation sequencing. In addition to assembling the genomes of five of the strains, we obtained information on interchromosomal translocation, ploidy, and single-nucleotide variants (SNVs). Collectively, these results indicated that the two groups of strains share S. cerevisiae haploid chromosomes. We therefore conclude that both groups of S. pastorianus strains share at least one interspecific hybridization event and originated from a common parental species and that differences in ploidy and SNVs between the groups can be explained by chromosomal deletion or loss of heterozygosity.

  10. Metal ion coordination in `R’ and `T’ state hybrid hemoglobins as revealed by optical, EPR and sulphhydryl reactivity studies

    Indian Academy of Sciences (India)

    S Ramasamy; Swarnalatha Venkateshrao; J M Rifkind; P T Manoharan

    2005-03-01

    The sulphhydryl environment in various mixed-metal hybrid hemoglobins, viz. 2(Cu)-2(FeCO), 2(FeCO)-2(Cu), 2(Cu)-2(Ni), 2(Ni)-2(Cu), was studied by reacting them with the sulphhydryl reagent, 4,4'-dithiodipyridine (4-PDS). The reactivity was compared with that of HbCO, NiHb and CuHb. It is found that there exists a correlation between conformational change and metal ion environment, not only at the extreme R and T states but also the intermediate conformations. EPR examinations of these hybrids show that both in 4R state-[Cu(II)-Fe(II)] and state-[Cu(II)-Ni(II)] hybrids at neutral pH and in the absence of IHP, CuPPIX, irrespective of the subunit in which it is present, has a mixed-metal ion environment: Species 1, a five-coordinated Cu2+ complex with strong proximal histidine bond and species 2, a four-coordinated complex without any covalent linkage with N F8-histidine.

  11. Molecular marker-based prediction of hybrid performance in maize using unbalanced data from multiple experiments with factorial crosses.

    Science.gov (United States)

    Schrag, Tobias A; Möhring, Jens; Maurer, Hans Peter; Dhillon, Baldev S; Melchinger, Albrecht E; Piepho, Hans-Peter; Sørensen, Anker P; Frisch, Matthias

    2009-02-01

    In hybrid breeding, the prediction of hybrid performance (HP) is extremely important as it is difficult to evaluate inbred lines in numerous cross combinations. Recent developments such as doubled haploid production and molecular marker technologies have enhanced the prospects of marker-based HP prediction to accelerate the breeding process. Our objectives were to (1) predict HP using a combined analysis of hybrids and parental lines from a breeding program, (2) evaluate the use of molecular markers in addition to phenotypic and pedigree data, (3) evaluate the combination of line per se data with marker-based estimates, (4) study the effect of the number of tested parents, and (5) assess the advantage of haplotype blocks. An unbalanced dataset of 400 hybrids from 9 factorial crosses tested in different experiments and data of 79 inbred parents were subjected to combined analyses with a mixed linear model. Marker data of the inbreds were obtained with 20 AFLP primer-enzyme combinations. Cross-validation was used to assess the performance prediction of hybrids of which no or only one parental line was testcross evaluated. For HP prediction, the highest proportion of explained variance (R (2)), 46% for grain yield (GY) and 70% for grain dry matter content (GDMC), was obtained from line per se best linear unbiased prediction (BLUP) estimates plus marker effects associated with mid-parent heterosis (TEAM-LM). Our study demonstrated that HP was efficiently predicted using molecular markers even for GY when testcross data of both parents are not available. This can help in improving greatly the efficiency of commercial hybrid breeding programs.

  12. Lower Hybrid Current Drive Experiments on Alcator C-Mod: Comparison with Theory and Simulation

    Science.gov (United States)

    Bonoli, Paul

    2007-11-01

    Recently, lower hybrid current drive (LHCD) experiments have been carried out on Alcator C-Mod using an RF system consisting of 12 klystrons at 4.6 GHz, feeding a 4 x 22 waveguide array. Up to 900 kW of LH power has been coupled in the range1.6 PLH 0.3 [1]. We have simulated the LH current drive in these discharges using the combined ray tracing / 3D (r, v, v//) Fokker Planck code GENRAY -- CQL3D [2] and found similar current drive efficiencies. Measurements of nonthermal x-ray emission and electron cyclotron emission (ECE) confirm the presence of a significant fast electron population that varies with waveguide phasing and plasma density. Studies are currently underway to investigate the role of fast electron diffusion and full-wave effects such as diffractional broadening in determining the spatial and velocity space structure of the nonthermal electrons. The 3D (r, v, v//) electron distribution function from CQL3D has been used in synthetic diagnostic codes to simulate the measured hard x-ray and ECE emissions. Fast electron diffusion times have been inferred from x-ray data by employing a radial diffusion operator in CQL3D and determining the fast electron diffusivities that are required to reproduce the experimentally observed profiles of hard x-ray emission. Finally, we have been performing full-wave LH field simulations using the massively parallel TORIC --LH solver [3] in order to assess spatial and spectral broadening of the incident wave front that can result from diffraction and wave focusing effects. [1] R. Parker, Bull. Am. Phys. Soc. 51, 20 (2006). [2] R.W. Harvey and M. McCoy, ``The CQL3D Fokker Planck Code,'' Proc. IAEA Tech. Comm. Meeting on Simulation and Modeling of Thermonuclear Plasmas, Montreal, Canada, 1992. [3] J. C. Wright et al., Nucl. Fusion 45, 1411 (2005).

  13. Charge transfer in Li/CFx-silver vanadium oxide hybrid cathode batteries revealed by solid state 7Li and 19F nuclear magnetic resonance spectroscopy

    Science.gov (United States)

    Sideris, Paul J.; Yew, Rowena; Nieves, Ian; Chen, Kaimin; Jain, Gaurav; Schmidt, Craig L.; Greenbaum, Steve G.

    2014-05-01

    Solid state 7Li and 19F magic angle spinning nuclear magnetic resonance (MAS NMR) experiments are conducted on several cathodes containing CFx-Silver vanadium oxide (CFx-Ag2V4O11) hybrid cathodes discharged to 50% depth of discharge (DoD) and stored at their open-circuit voltage for a period of one and three months. Three carbonaceous sources for the CFx phase are investigated: petroleum coke-based, fibrous, and mixed fibrous. For each hybrid cathode, a measurable increase in the relative amount of lithium fluoride is observed after a three month resting period in both the 7Li and 19F NMR spectra. These changes are attributed to lithium ion migration from the silver vanadium oxide to the CFx phase during the resting period, and help clarify the mechanism behind high power handling capability of this cathode.

  14. PET/MRI: a novel hybrid imaging technique. Major clinical indications and preliminary experience in Brazil.

    Science.gov (United States)

    Vitor, Taise; Martins, Karine Minaif; Ionescu, Tudor Mihai; Cunha, Marcelo Livorsi da; Baroni, Ronaldo Hueb; Garcia, Marcio Ricardo Taveira; Wagner, Jairo; Campos, Guilherme de Carvalho; Nogueira, Solange Amorim; Guerra, Elaine Gonçalves; Amaro, Edson

    2017-01-01

    In recent years, medical imaging with hybrid techniques has widely accepted and employed in clinical routine. PET/MRI offers significant advantages, including excellent contrast and resolution and reduced ionizing radiation, as compared to well-established PET/CT. Therefore, PET/MRI is a promising modality for oncologic imaging of some regions, such as brain, head and neck, liver and pelvis. This article set out to analyze clinical conditions that could benefit from PET/MRI imaging based on our caseload. The potential of PET/MRI to become the imaging modality of choice for assessment of neurologic and oncologic conditions associated with soft tissues is highlighted. Clinical aspects of PET/MRI and its application to clinical cases are illustrated with examples extracted from the authors' preliminary experience. RESUMO Nos últimos anos, imagens médicas com tecnologias híbridas tornaram-se amplamente aceitas e utilizadas na prática clínica. O PET/RM possui vantagens importantes, incluindo excelentes contrastes e resolução, e menor radiação ionizante, em comparação ao PET/TC. Por isto, é uma modalidade promissora para exames de imagem de pacientes oncológicos, para avaliar o cérebro, cabeça e pescoço, o fígado e a pelve. O objetivo deste artigo foi analisar as situações clínicas que se beneficiariam de exames de PET/RM a partir de uma casuística. Destacamos o potencial desta técnica se tornar o método de imagem de escolha para doenças neurológicas e oncológicas que envolvam partes moles. Os aspectos clínicos de PET/RM e sua aplicação aos casos clínicos são ilustrados com exemplos da experiência inicial dos autores.

  15. Growth, straightness and survival at age 32 in a Pinus strobus x P. wallichiana F1 hybrid population (Experiment 1

    Directory of Open Access Journals (Sweden)

    Ioan Blada

    2013-11-01

    Full Text Available An interspecific factorial hybridization was made, where seven P. strobus female parent trees were mated to four P. wallichiana male trees, in order to transfer genes for resistance to blister-rust from the blue pine to the F1 hybrids. The hybrid seedlings and the open pollinated families of the two parents were three times consecutivelyinoculated with blister-rust. The six years old seedlings were transplanted in the field in the so called Văliug Experiment 1. The experimental design consisted in 28 hybrid full-sib families and two open pollinated families of the parent species. Plantation took place in a complete randomized block design with three blocks, with 6 to 12 seedlings per linear plot and 3 x 3 m spacing. This paper is based on the measurements made at age 32, just after the first thinning. Diameter at breast height, tree height, tree volume, stem straightness and tree survival were the five measured traits. According to ANOVA, significant (p < 0.05 and highly significant (p< 0.001 differences for diameter at breast height, tree height, volume growth rate, stem straightness and tree survival were detected between hybrid families. Highly significant (p < 0.01, p < 0.001 differences were found between eastern white pine female parents for survival, stem straightness and all growth traits, suggestingthat nuclear additive genes are controlling the respective characters. Consequently, high survival or genetic resistance to blister-rust can be found within the P. strobus species even though it is highly susceptible to this pathogen. The P. wallichiana parents exhibited significant additive effects on straightness and breast height diameter, but no significance in height, volume, and tree survival. The contribution of the additive variance to the phenotypic one was 65.7% for diameter, 58.6% for height, 50.5% for volume, 70.4% for stem straightness and 73.4% for tree survival. Hence, additive variance should be employed in a breeding program

  16. Unaware yet reliant on attention: Experience sampling reveals that mind-wandering impedes implicit learning.

    Science.gov (United States)

    Franklin, Michael S; Smallwood, Jonathan; Zedelius, Claire M; Broadway, James M; Schooler, Jonathan W

    2016-02-01

    Although implicit learning has been widely studied, controversy remains regarding its reliance on attentional resources. A central issue in this controversy is the question of how best to manipulate attention. The usual approach of comparing implicit learning in a serial reaction time (SRT) task under single- versus dual-task conditions is known to be problematic, because the secondary task may not only divert attention away from the primary task, but also interfere with the implicit-learning process itself. To address this confound, in the present study we used an experience-sampling instead of a dual-task approach. We assessed lapses of attention (mind-wandering) with experience-sampling thought probes during a standard implicit-learning SRT task. The results revealed a significant negative correlation between mind-wandering and implicit learning. Thus, greater task focus was associated with improved implicit sequence learning. This result suggests that, at least in the context of this SRT task, optimal implicit learning relies on attention.

  17. Targeted molecular dynamics reveals overall common conformational changes upon hybrid domain swing-out in beta3 integrins.

    Science.gov (United States)

    Provasi, Davide; Murcia, Marta; Coller, Barry S; Filizola, Marta

    2009-11-01

    The beta3 integrin family members alphaIIbeta3 and alphaVbeta3 signal bidirectionally through long-range allosteric changes, including a transition from a bent unliganded-closed low-affinity state to an extended liganded-open high-affinity state. To obtain an atomic-level description of this transition in an explicit solvent, we carried out targeted molecular dynamics simulations of the headpieces of alphaIIbeta3 and alphaVbeta3 integrins. Although minor differences were observed between these receptors, our results suggest a common transition pathway in which the hybrid domain swing-out is accompanied by conformational changes within the beta3 betaA (I-like) domain that propagate through the alpha7 helix C-terminus, and are followed by the alpha7 helix downward motion and the opening of the beta6-alpha7 loop. Breaking of contact interactions between the beta6-alpha7 loop and the alpha1 helix N-terminus results in helix straightening, internal rearrangements of the specificity determining loop (SDL), movement of the beta1-alpha1 loop toward the metal ion dependent adhesion site (MIDAS), and final changes at the interfaces between the beta3 betaA (I-like) domain and either the hybrid or the alpha beta-propeller domains. Taken together, our results suggest novel testable hypotheses of intradomain and interdomain interactions responsible for beta3 integrin activation.

  18. Mechanical Properties of Graphene Nanoplatelet/Carbon Fiber/Epoxy Hybrid Composites: Multiscale Modeling and Experiments

    Science.gov (United States)

    Hadden, C. M.; Klimek-McDonald, D. R.; Pineda, E. J.; King, J. A.; Reichanadter, A. M.; Miskioglu, I.; Gowtham, S.; Odegard, G. M.

    2015-01-01

    Because of the relatively high specific mechanical properties of carbon fiber/epoxy composite materials, they are often used as structural components in aerospace applications. Graphene nanoplatelets (GNPs) can be added to the epoxy matrix to improve the overall mechanical properties of the composite. The resulting GNP/carbon fiber/epoxy hybrid composites have been studied using multiscale modeling to determine the influence of GNP volume fraction, epoxy crosslink density, and GNP dispersion on the mechanical performance. The hierarchical multiscale modeling approach developed herein includes Molecular Dynamics (MD) and micromechanical modeling, and it is validated with experimental testing of the same hybrid composite material system. The results indicate that the multiscale modeling approach is accurate and provides physical insight into the composite mechanical behavior. Also, the results quantify the substantial impact of GNP volume fraction and dispersion on the transverse mechanical properties of the hybrid composite, while the effect on the axial properties is shown to be insignificant.

  19. Mechanical Properties of Graphene Nanoplatelet Carbon Fiber Epoxy Hybrid Composites: Multiscale Modeling and Experiments

    Science.gov (United States)

    Hadden, Cameron M.; Klimek-McDonald, Danielle R.; Pineda, Evan J.; King, Julie A.; Reichanadter, Alex M.; Miskioglu, Ibrahim; Gowtham, S.; Odegard, Gregory M.

    2015-01-01

    Because of the relatively high specific mechanical properties of carbon fiber/epoxy composite materials, they are often used as structural components in aerospace applications. Graphene nanoplatelets (GNPs) can be added to the epoxy matrix to improve the overall mechanical properties of the composite. The resulting GNP/carbon fiber/epoxy hybrid composites have been studied using multiscale modeling to determine the influence of GNP volume fraction, epoxy crosslink density, and GNP dispersion on the mechanical performance. The hierarchical multiscale modeling approach developed herein includes Molecular Dynamics (MD) and micromechanical modeling, and it is validated with experimental testing of the same hybrid composite material system. The results indicate that the multiscale modeling approach is accurate and provides physical insight into the composite mechanical behavior. Also, the results quantify the substantial impact of GNP volume fraction and dispersion on the transverse mechanical properties of the hybrid composite, while the effect on the axial properties is shown to be insignificant.

  20. Modelling of hybrid scenario: from present-day experiments towards ITER

    Science.gov (United States)

    Litaudon, X.; Voitsekhovitch, I.; Artaud, J. F.; Belo, P.; Bizarro, João P. S.; Casper, T.; Citrin, J.; Fable, E.; Ferreira, J.; Garcia, J.; Garzotti, L.; Giruzzi, G.; Hobirk, J.; Hogeweij, G. M. D.; Imbeaux, F.; Joffrin, E.; Koechl, F.; Liu, F.; Lönnroth, J.; Moreau, D.; Parail, V.; Schneider, M.; Snyder, P. B.; the ASDEX-Upgrade Team; Contributors, JET-EFDA; the EU-ITM ITER Scenario Modelling Group

    2013-07-01

    The ‘hybrid’ scenario is an attractive operating scenario for ITER since it combines long plasma duration with the reliability of the reference H-mode regime. We review the recent European modelling effort carried out within the Integrated Scenario Modelling group which aims at (i) understanding the underlying physics of the hybrid regime in ASDEX-Upgrade and JET and (ii) extrapolating them towards ITER. JET and ASDEX-Upgrade hybrid scenarios performed under different experimental conditions have been simulated in an interpretative and predictive way in order to address the current profile dynamics and its link with core confinement, the relative importance of magnetic shear, s, and E × B flow shear on the core turbulence, pedestal stability and H-L transition. The correlation of the improved confinement with an increased s/q at outer radii observed in JET and ASDEX-Upgrade discharges is consistent with the predictions based on the GLF23 model applied in the simulations of the ion and electron kinetic profiles. Projections to ITER hybrid scenarios have been carried out focusing on optimization of the heating/current drive schemes to reach and ultimately control the desired plasma equilibrium using ITER actuators. Firstly, access condition to the hybrid-like q-profiles during the current ramp-up phase has been investigated. Secondly, from the interpreted role of the s/q ratio, ITER hybrid scenario flat-top performance has been optimized through tailoring the q-profile shape and pedestal conditions. EPED predictions of pedestal pressure and width have been used as constraints in the interpretative modelling while the core heat transport is predicted by GLF23. Finally, model-based approach for real-time control of advanced tokamak scenarios has been applied to ITER hybrid regime for simultaneous magnetic and kinetic profile control.

  1. The ARSQ 2.0 reveals age and personality effects on mind-wandering experiences.

    Science.gov (United States)

    Diaz, B Alexander; Van Der Sluis, Sophie; Benjamins, Jeroen S; Stoffers, Diederick; Hardstone, Richard; Mansvelder, Huibert D; Van Someren, Eus J W; Linkenkaer-Hansen, Klaus

    2014-01-01

    The human brain frequently generates thoughts and feelings detached from environmental demands. Investigating the rich repertoire of these mind-wandering experiences is challenging, as it depends on introspection and mapping its content requires an unknown number of dimensions. We recently developed a retrospective self-report questionnaire-the Amsterdam Resting-State Questionnaire (ARSQ)-which quantifies mind wandering along seven dimensions: "Discontinuity of Mind," "Theory of Mind," "Self," "Planning," "Sleepiness," "Comfort," and "Somatic Awareness." Here, we show using confirmatory factor analysis that the ARSQ can be simplified by standardizing the number of items per factor and extending it to a 10-dimensional model, adding "Health Concern," "Visual Thought," and "Verbal Thought." We will refer to this extended ARSQ as the "ARSQ 2.0." Testing for effects of age and gender revealed no main effect for gender, yet a moderate and significant negative effect for age on the dimensions of "Self," "Planning," and "Visual Thought." Interestingly, we observed stable and significant test-retest correlations across measurement intervals of 3-32 months except for "Sleepiness" and "Health Concern." To investigate whether this stability could be related to personality traits, we correlated ARSQ scores to proxy measures of Cloninger's Temperament and Character Inventory, revealing multiple significant associations for the trait "Self-Directedness." Other traits correlated to specific ARSQ dimensions, e.g., a negative association between "Harm Avoidance" and "Comfort." Together, our results suggest that the ARSQ 2.0 is a promising instrument for quantitative studies on mind wandering and its relation to other psychological or physiological phenomena.

  2. The ARSQ 2.0 reveals age and personality effects on mind-wandering experiences

    Directory of Open Access Journals (Sweden)

    B. Alexander Diaz

    2014-04-01

    Full Text Available The human brain frequently generates thoughts and feelings detached from environmental demands. Investigating the rich repertoire of these mind-wandering experiences is challenging, as it depends on introspection and mapping its content requires an unknown number of dimensions. We recently developed a retrospective self-report questionnaire—the Amsterdam Resting-State questionnaire (ARSQ—which quantifies mind wandering along seven dimensions: Discontinuity of Mind, Theory of Mind, Self, Planning, Sleepiness, Comfort, and Somatic Awareness. Here, we show using confirmatory factor analysis that the ARSQ can be simplified by standardizing the number of items per factor and extending it to a 10-dimensional model, adding Health Concern, Visual Thought and Verbal Thought. We will refer to this extended ARSQ as the ARSQ 2.0. Testing for effects of age and gender revealed no main effect for gender, yet a moderate and significant negative effect for age on the dimensions of Self, Planning and Visual Thought. Interestingly, we observed stable and significant test-retest correlations across measurement intervals of 3 to 32 months except for Sleepiness and Health Concern. To investigate whether this stability could be related to personality traits, we correlated ARSQ scores to proxy measures of Cloninger’s Temperament and Character Inventory, revealing multiple significant associations for the trait Self-Directedness. Other traits correlated to specific ARSQ dimensions, e.g., a negative association between Harm Avoidance and Comfort. Together, our results suggest that the ARSQ 2.0 is a promising instrument for quantitative studies on mind wandering and its relation to other psychological or physiological phenomena.

  3. Ion tail formation by cascade trapping in lower-hybrid heating experiments

    Energy Technology Data Exchange (ETDEWEB)

    Gell, Y.; Nakach, R.

    1986-03-01

    The possibility of the operation of a multistep trapping process in the interaction of the ions of a plasma with lower--hybrid waves, leading to the formation of a tail in the ion velocity distribution, is investigated. Considering waves propagating perpendicularly to a homogeneous magnetic field, it is found that the spectral nature of the lower-hybrid excitation and the dependency of the perpendicular wave vector on the radial coordinate of the torus are the characteristics of the system which enable this cascading acceleration to take place. The conditions and limitations for the operation of this mechanism are discussed.

  4. THE METAFUNCTIONS REVEALED: EFL LEARNERS’ EXPERIENCE IN MAKING SENSE OF THE TEXT

    Directory of Open Access Journals (Sweden)

    Lala Bumela

    2012-01-01

    Full Text Available Abstract: This study was primarily intended to capture the English as foreign language learners’ (henceforth EFL learners experience in making sense of the text: to what extent the meaning-making elements of the texts are comprehended and interpreted by EFL learners as readers.  The investigation itself was centered around the notion of metafunctions – ideational, interpersonal, and textual – of the text for several reasons.  This study tries to reveal how EFL learners make sense of the two selected articles taken from “The Jakarta Post” entitled “Australia Stops Some Cattle Exports to Indonesia” and “Australia’s ban on Cattle Exports to RI Political”.  The two articles were downloaded from thejakartapost.com in June 2011.  The main reason why newspaper articles were chosen was because, as Lehtonen (20006 puts it, “newspaper descriptions of reality are always produced from a certain perspective”.  In the context of this study, the two groups of respondents were involved: two respondents who have not taken Functional Grammar class (group one and two respondents who have attended functional grammar class (group two.  The four respondents are English Department students at one private university in Kuningan, West Java.  The study shows  that reading is not simply a matter of recognizing the alphabetical orders of the texts.  Reading is, in fact, a discursive activity which is influenced by the previous textual experiences.  The quality of interpretation is always affected by the background knowledge of readers, the ability in recognizing the features of the texts, and, of course, the ability to identify the metafunctions of the texts.  An interaction with a discourse will automatically generate a new discourse.  The reading of particular texts will in turn trigger the reading (and the discussion and analysis of the other texts.   Key words: metafunctions, meaning making, metacognitive system, subculture

  5. THE METAFUNCTIONS REVEALED: EFL LEARNERS’ EXPERIENCE IN MAKING SENSE OF THE TEXT

    Directory of Open Access Journals (Sweden)

    Lala Bumela

    2012-01-01

    Full Text Available This study was primarily intended to capture the English as foreign language learners’ (henceforth EFL learners experience in making sense of the text: to what extent the meaning-making elements of the texts are comprehended and interpreted by EFL learners as readers. The investigation itself was centered around the notion of metafunctions – ideational, interpersonal, and textual – of the text for several reasons. This study tries to reveal how EFL learners make sense of the two selected articles taken from “The Jakarta Post” entitled “Australia Stops Some Cattle Exports to Indonesia” and “Australia’s ban on Cattle Exports to RI Political”. The two articles were downloaded from thejakartapost.com in June 2011. The main reason why newspaper articles were chosen was because, as Lehtonen (20006 puts it, “newspaper descriptions of reality are always produced from a certain perspective”. In the context of this study, the two groups of respondents were involved: two respondents who have not taken Functional Grammar class (group one and two respondents who have attended functional grammar class (group two. The four respondents are English Department students at one private university in Kuningan, West Java. The study shows that reading is not simply a matter of recognizing the alphabetical orders of the texts. Reading is, in fact, a discursive activity which is influenced by the previous textual experiences. The quality of interpretation is always affected by the background knowledge of readers, the ability in recognizing the features of the texts, and, of course, the ability to identify the metafunctions of the texts. An interaction with a discourse will automatically generate a new discourse. The reading of particular texts will in turn trigger the reading (and the discussion and analysis of the other texts

  6. Hybrid Reynolds-Averaged/Large-Eddy Simulations of a Co-Axial Supersonic Free-Jet Experiment

    Science.gov (United States)

    Baurle, R. A.; Edwards, J. R.

    2009-01-01

    Reynolds-averaged and hybrid Reynolds-averaged/large-eddy simulations have been applied to a supersonic coaxial jet flow experiment. The experiment utilized either helium or argon as the inner jet nozzle fluid, and the outer jet nozzle fluid consisted of laboratory air. The inner and outer nozzles were designed and operated to produce nearly pressure-matched Mach 1.8 flow conditions at the jet exit. The purpose of the computational effort was to assess the state-of-the-art for each modeling approach, and to use the hybrid Reynolds-averaged/large-eddy simulations to gather insight into the deficiencies of the Reynolds-averaged closure models. The Reynolds-averaged simulations displayed a strong sensitivity to choice of turbulent Schmidt number. The baseline value chosen for this parameter resulted in an over-prediction of the mixing layer spreading rate for the helium case, but the opposite trend was noted when argon was used as the injectant. A larger turbulent Schmidt number greatly improved the comparison of the results with measurements for the helium simulations, but variations in the Schmidt number did not improve the argon comparisons. The hybrid simulation results showed the same trends as the baseline Reynolds-averaged predictions. The primary reason conjectured for the discrepancy between the hybrid simulation results and the measurements centered around issues related to the transition from a Reynolds-averaged state to one with resolved turbulent content. Improvements to the inflow conditions are suggested as a remedy to this dilemma. Comparisons between resolved second-order turbulence statistics and their modeled Reynolds-averaged counterparts were also performed.

  7. Spectrum of Cytogenomic Abnormalities Revealed by Array Comparative Genomic Hybridization on Products of Conception Culture Failure and Normal Karyotype Samples.

    Science.gov (United States)

    Zhou, Qinghua; Wu, Shen-Yin; Amato, Katherine; DiAdamo, Autumn; Li, Peining

    2016-03-20

    Approximately 30% of pregnancies after implantation end up in spontaneous abortions, and 50% of them are caused by chromosomal abnormalities. However, the spectrum of genomic copy number variants (CNVs) in products of conception (POC) and the underlying gene-dosage-sensitive mechanisms causing spontaneous abortions remain largely unknown. In this study, array comparative genomic hybridization (aCGH) analysis was performed as a salvage procedure for 128 POC culture failure (POC-CF) samples and as a supplemental procedure for 106 POC normal karyotype (POC-NK) samples. Chromosomal abnormalities were detected in 10% of POC-CF and pathogenic CNVs were detected in 3.9% of POC-CF and 5.7% of POC-NK samples. Compiled results from this study and relevant case series through a literature review demonstrated an abnormality detection rate (ADR) of 35% for chromosomal abnormalities in POC-CF samples, 3.7% for pathogenic CNVs in POC-CF samples, and 4.6% for pathogenic CNVs in POC-NK samples. Ingenuity Pathway Analysis (IPA) was performed on the genes from pathogenic CNVs found in POC samples. The denoted primary gene networks suggested that apoptosis and cell proliferation pathways are involved in miscarriage. In summary, a similar spectrum of cytogenomic abnormalities was observed in POC culture success and POC-CF samples. A threshold effect correlating the number of dosage-sensitive genes in a chromosome with the observed frequency of autosomal trisomy is proposed. A rationalized approach using firstly fluorescence in situ hybridization (FISH) testing with probes of chromosomes X/Y/18, 13/21, and 15/16/22 for common aneuploidies and polyploidies and secondly aCGH for other cytogenomic abnormalities is recommended for POC-CF samples.

  8. Repeated Structural Imaging Reveals Nonlinear Progression of Experience-Dependent Volume Changes in Human Motor Cortex.

    Science.gov (United States)

    Wenger, Elisabeth; Kühn, Simone; Verrel, Julius; Mårtensson, Johan; Bodammer, Nils Christian; Lindenberger, Ulman; Lövdén, Martin

    2017-05-01

    Evidence for experience-dependent structural brain change in adult humans is accumulating. However, its time course is not well understood, as intervention studies typically consist of only 2 imaging sessions (before vs. after training). We acquired up to 18 structural magnetic resonance images over a 7-week period while 15 right-handed participants practiced left-hand writing and drawing. After 4 weeks, we observed increases in gray matter of both left and right primary motor cortices relative to a control group; 3 weeks later, these differences were no longer reliable. Time-series analyses revealed that gray matter in the primary motor cortices expanded during the first 4 weeks and then partially renormalized, in particular in the right hemisphere, despite continued practice and increasing task proficiency. Similar patterns of expansion followed by partial renormalization are also found in synaptogenesis, cortical map plasticity, and maturation, and may qualify as a general principle of structural plasticity. Research on human brain plasticity needs to encompass more than 2 measurement occasions to capture expansion and potential renormalization processes over time. © The Author 2016. Published by Oxford University Press. All rights reserved. For Permissions, please e-mail: journals.permissions@oup.com.

  9. Developement of Hybrid Photo-detectors for the Hyper-Kamiokande Experiment

    Energy Technology Data Exchange (ETDEWEB)

    Hirota, Seiko [Kyoto University, Kitashirakawa Oiwake-cho, Sakyo-ku, Kyoto-city, Kyoto (Japan); Nishimura, Yasuhiro; Nakayama, Shoei; Kametani, Isao; Shiozawa, Masato; Suzuki, Yoichiro; Sekiya, Hiroyuki; Nakahata, Masayuki; Hayato, Yoshinari; Haga, Yuto; Miura, Makoto [ICRR, Kashiwanoha 5-1-5, Kashiwa-sity, Chiba (Japan); Ichikawa, Atsuko; Ikeda, Motoyasu; Nakaya, Tsuyoshi; Minamino, Akihiro; Tateishi, Keiji [Kyoto University, Kitashirakawa Oiwake-cho, Sakyo-ku, Kyoto-city, Kyoto (Japan); Aihara, Hiroaki; Suda, Yusuke; Yokoyama, Masashi [University of Tokyo, Hongo 7-3-1, Bunkyo-Ku, Tokyo (Japan); Omura, Takayuki [Hamamatsu K.K., Sunayama-cho, 325-6, Naka-ku, Hamamatsu-city, Shizuoka (Japan); and others

    2014-08-15

    We are developing a hybrid photo detector (HPD) for the Hyper-Kamiokande Project. Eight-inch HPDs were prepared to evaluate their performance. Based on the results from these measurements, HPDs achieve a better performance such as single photon separation than conventional PMTs. A verification study lasting a few years in a water tank is planned in 2013 to check their feasibility.

  10. Hybrid Ground-Source Heat Pump Installations: Experiences, Improvements, and Tools

    Energy Technology Data Exchange (ETDEWEB)

    Scott Hackel; Amanda Pertzborn

    2011-06-30

    One innovation to ground-source heat pump (GSHP, or GHP) systems is the hybrid GSHP (HyGSHP) system, which can dramatically decrease the first cost of GSHP systems by using conventional technology (such as a cooling tower or a boiler) to meet a portion of the peak heating or cooling load. This work uses three case studies (two cooling-dominated, one heating-dominated) to demonstrate the performance of the hybrid approach. Three buildings were studied for a year; the measured data was used to validate models of each system. The models were used to analyze further improvements to the hybrid approach, and establish that this approach has positive impacts, both economically and environmentally. Lessons learned by those who design and operate the systems are also documented, including discussions of equipment sizing, pump operation, and cooling tower control. Finally, the measured data sets and models that were created during this work are described; these materials have been made freely available for further study of hybrid systems.

  11. Fatigue experiments on hybrid welded connections made of very high strength steels

    NARCIS (Netherlands)

    Pijpers, R.J.M.; Kolstein, M.H.; Romeijn, A.; Bijlaard, F.S.K.

    2009-01-01

    In a fatigue loaded structure made of Very High Strength Steels (VHSS) absolute and relative stress variations will be higher compared to those in structures made of lower grade steels. Stress concentrations in joints reduce the advantage of VHSS under cyclic loading. A hybrid connection, consisting

  12. Study of multipass regimes in lower hybrid current drive experiments on Tore Supra

    Energy Technology Data Exchange (ETDEWEB)

    Arslanbekov, R.; Litaudon, X.; Peysson, Y.; Hoang, G.T.; Kazarian, F.; Moreau, D. [Association Euratom-CEA, Centre d`Etudes de Cadarache, 13 - Saint-Paul-lez-Durance (France). Dept. de Recherches sur la Fusion Controlee; Shoucri, M.; Shkarofsky, I.P. [Centre Canadien de Fusion Magnetique, Varennes, PQ (Canada); Baranov, Y. [Commission of the European Communities, Abingdon (United Kingdom). JET Joint Undertaking; Kupfer, K. [General Atomics, San Diego, CA (United States)

    1995-12-31

    This document presents a study of multipass regimes in Lower Hybrid Current Drive on Tore Supra. A statistical model of the plasma wave propagation based on the Fokker-Planck theory is proposed, together with experimental results performed on Tore Supra. (TEC). 9 refs., 4 figs.

  13. Hybrid Placemaking in the Library: Designing Digital Technology to Enhance Users' On-Site Experience

    Science.gov (United States)

    Bilandzic, Mark; Johnson, Daniel

    2013-01-01

    This paper presents research findings and design strategies that illustrate how digital technology can be applied as a tool for "hybrid" placemaking in ways that would not be possible in purely digital or physical spaces. Digital technology has revolutionised the way people learn and gather new information. This trend has challenged the…

  14. Research Experience with a Plug-In Hybrid Electric Vehicle: Preprint

    Energy Technology Data Exchange (ETDEWEB)

    Markel, T.; Pesaran, A.; Kelly, K.; Thornton, M.; Nortman, P.

    2007-12-01

    This technical document reports on the exploratory research conducted by NREL on PHEV technology using a Toyota Prius that has been converted to a plug-in hybrid electric vehicle. The data includes both controlled dynamometer and on-road test results, particularly for hilly driving. The results highlight the petroleum savings and benefits of PHEV technology.

  15. HYBRID SNCR-SCR TECHNOLOGIES FOR NOX CONTROL: MODELING AND EXPERIMENT

    Science.gov (United States)

    The hybrid process of homogeneous gas-phase selective non-catalytic reduction (SNCR) followed by selective catalytic reduction (SCR) of nitric oxide (NO) was investigated through experimentation and modeling. Measurements, using NO-doped flue gas from a gas-fired 29 kW test combu...

  16. Leaf-scale experiments reveal an important omission in the Penman-Monteith equation

    Science.gov (United States)

    Schymanski, Stanislaus J.; Or, Dani

    2017-02-01

    The Penman-Monteith (PM) equation is commonly considered the most advanced physically based approach to computing transpiration rates from plants considering stomatal conductance and atmospheric drivers. It has been widely evaluated at the canopy scale, where aerodynamic and canopy resistance to water vapour are difficult to estimate directly, leading to various empirical corrections when scaling from leaf to canopy. Here, we evaluated the PM equation directly at the leaf scale, using a detailed leaf energy balance model and direct measurements in a controlled, insulated wind tunnel using artificial leaves with fixed and predefined stomatal conductance. Experimental results were consistent with a detailed leaf energy balance model; however, the results revealed systematic deviations from PM-predicted fluxes, which pointed to fundamental problems with the PM equation. Detailed analysis of the derivation by Monteith(1965) and subsequent amendments revealed two errors: one in neglecting two-sided exchange of sensible heat by a planar leaf, and the other related to the representation of hypostomatous leaves, which are very common in temperate climates. The omission of two-sided sensible heat flux led to bias in simulated latent heat flux by the PM equation, which was as high as 50 % of the observed flux in some experiments. Furthermore, we found that the neglect of feedbacks between leaf temperature and radiative energy exchange can lead to additional bias in both latent and sensible heat fluxes. A corrected set of analytical solutions for leaf temperature as well as latent and sensible heat flux is presented, and comparison with the original PM equation indicates a major improvement in reproducing experimental results at the leaf scale. The errors in the original PM equation and its failure to reproduce experimental results at the leaf scale (for which it was originally derived) propagate into inaccurate sensitivities of transpiration and sensible heat fluxes to

  17. Suppression subtraction hybridization (SSH) and macroarray techniques reveal differential gene expression profiles in brain of sea bream infected with nodavirus.

    Science.gov (United States)

    Dios, S; Poisa-Beiro, L; Figueras, A; Novoa, B

    2007-03-01

    Despite of the impact that viruses have on aquatic organisms, relatively little is known on how fish fight against these infections. In this work, the brain gene expression pattern of sea bream (Sparus aurata) in response to nodavirus infection was investigated. We used the suppression subtractive hybridization (SSH) method to generate a subtracted cDNA library enriched with gene transcripts differentially expressed after 1 day post-infection. Some of the ESTs from the infected tissues fell in gene categories related to stress and immune responses. For the reverse library (ESTs expressed in controls compared with infected tissues) the most abundant transcripts were of ribosomal and mitochondrial nature. Several ESTs potentially induced by virus exposure were selected for in vivo expression studies. We observed a clear difference in expression between infected and control samples for two candidate genes, ubiquitin conjugating enzyme 7 interacting protein, which seems to play an important role in apoptosis and the interferon induced protein with helicase C domain 1 (mda-5) that contributes to apoptosis and regulates the type I IFN production, a key molecule of the antiviral innate response in most organisms.

  18. Automated design of probes for rRNA-targeted fluorescence in situ hybridization reveals the advantages of using dual probes for accurate identification.

    Science.gov (United States)

    Wright, Erik S; Yilmaz, L Safak; Corcoran, Andrew M; Ökten, Hatice E; Noguera, Daniel R

    2014-08-01

    Fluorescence in situ hybridization (FISH) is a common technique for identifying cells in their natural environment and is often used to complement next-generation sequencing approaches as an integral part of the full-cycle rRNA approach. A major challenge in FISH is the design of oligonucleotide probes with high sensitivity and specificity to their target group. The rapidly expanding number of rRNA sequences has increased awareness of the number of potential nontargets for every FISH probe, making the design of new FISH probes challenging using traditional methods. In this study, we conducted a systematic analysis of published probes that revealed that many have insufficient coverage or specificity for their intended target group. Therefore, we developed an improved thermodynamic model of FISH that can be applied at any taxonomic level, used the model to systematically design probes for all recognized genera of bacteria and archaea, and identified potential cross-hybridizations for the selected probes. This analysis resulted in high-specificity probes for 35.6% of the genera when a single probe was used in the absence of competitor probes and for 60.9% when up to two competitor probes were used. Requiring the hybridization of two independent probes for positive identification further increased specificity. In this case, we could design highly specific probe sets for up to 68.5% of the genera without the use of competitor probes and 87.7% when up to two competitor probes were used. The probes designed in this study, as well as tools for designing new probes, are available online (http://DECIPHER.cee.wisc.edu).

  19. Mobile 3D quality of experience evaluation: a hybrid data collection and analysis approach

    Science.gov (United States)

    Utriainen, Timo; Häyrynen, Jyrki; Jumisko-Pyykkö, Satu; Boev, Atanas; Gotchev, Atanas; Hannuksela, Miska M.

    2011-02-01

    The paper presents a hybrid approach to study the user's experienced quality of 3D visual content on mobile autostereoscopic displays. It combines extensive subjective tests with collection and objective analysis of eye-tracked data. 3D cues which are significant for mobiles are simulated in the generated 3D test content. The methodology for conducting subjective quality evaluation includes hybrid data-collection of quantitative quality preferences, qualitative impressions, and binocular eye-tracking. We present early results of the subjective tests along with eye movement reaction times, areas of interest and heatmaps obtained from raw eye-tracked data after statistical analysis. The study contributes to the question what is important to be visualized on portable auto-stereoscopic displays and how to maintain and visually enhance the quality of 3D content for such displays.

  20. Bisphosphonate inhibitors reveal a large elasticity of plastidic isoprenoid synthesis pathway in isoprene-emitting hybrid aspen.

    Science.gov (United States)

    Rasulov, Bahtijor; Talts, Eero; Kännaste, Astrid; Niinemets, Ülo

    2015-06-01

    Recently, a feedback inhibition of the chloroplastic 1-deoxy-D-xylulose 5-phosphate (DXP)/2-C-methyl-D-erythritol 4-phosphate (MEP) pathway of isoprenoid synthesis by end products dimethylallyl diphosphate (DMADP) and isopentenyl diphosphate (IDP) was postulated, but the extent to which DMADP and IDP can build up is not known. We used bisphosphonate inhibitors, alendronate and zoledronate, that inhibit the consumption of DMADP and IDP by prenyltransferases to gain insight into the extent of end product accumulation and possible feedback inhibition in isoprene-emitting hybrid aspen (Populus tremula × Populus tremuloides). A kinetic method based on dark release of isoprene emission at the expense of substrate pools accumulated in light was used to estimate the in vivo pool sizes of DMADP and upstream metabolites. Feeding with fosmidomycin, an inhibitor of DXP reductoisomerase, alone or in combination with bisphosphonates was used to inhibit carbon input into DXP/MEP pathway or both input and output. We observed a major increase in pathway intermediates, 3- to 4-fold, upstream of DMADP in bisphosphonate-inhibited leaves, but the DMADP pool was enhanced much less, 1.3- to 1.5-fold. In combined fosmidomycin/bisphosphonate treatment, pathway intermediates accumulated, reflecting cytosolic flux of intermediates that can be important under strong metabolic pull in physiological conditions. The data suggested that metabolites accumulated upstream of DMADP consist of phosphorylated intermediates and IDP. Slow conversion of the huge pools of intermediates to DMADP was limited by reductive energy supply. These data indicate that the DXP/MEP pathway is extremely elastic, and the presence of a significant pool of phosphorylated intermediates provides an important valve for fine tuning the pathway flux.

  1. Seasonal cycle of volume transport through Kerama Gap revealed by a 20-year global HYbrid Coordinate Ocean Model reanalysis

    Science.gov (United States)

    Yu, Zhitao; Metzger, E. Joseph; Thoppil, Prasad; Hurlburt, Harley E.; Zamudio, Luis; Smedstad, Ole Martin; Na, Hanna; Nakamura, Hirohiko; Park, Jae-Hun

    2015-12-01

    The temporal variability of volume transport from the North Pacific Ocean to the East China Sea (ECS) through Kerama Gap (between Okinawa Island and Miyakojima Island - a part of Ryukyu Islands Arc) is investigated using a 20-year global HYbrid Coordinate Ocean Model (HYCOM) reanalysis with the Navy Coupled Ocean Data Assimilation from 1993 to 2012. The HYCOM mean transport is 2.1 Sv (positive into the ECS, 1 Sv = 106 m3/s) from June 2009 to June 2011, in good agreement with the observed 2.0 Sv transport during the same period. This is similar to the 20-year mean Kerama Gap transport of 1.95 ± 4.0 Sv. The 20-year monthly mean volume transport (transport seasonal cycle) is maximum in October (3.0 Sv) and minimum in November (0.5 Sv). The annual variation component (345-400 days), mesoscale eddy component (70-345 days), and Kuroshio meander component (< 70 days) are separated to determine their contributions to the transport seasonal cycle. The annual variation component has a close relation with the local wind field and increases (decreases) transport into the ECS through Kerama Gap in summer (winter). Most of the variations in the transport seasonal cycle come from the mesoscale eddy component. The impinging mesoscale eddies increase the transport into the ECS during January, February, May, and October, and decrease it in March, April, November, and December, but have little effect in summer (June-September). The Kuroshio meander components cause smaller transport variations in summer than in winter.

  2. Array comparative genomic hybridization profiling analysis reveals deoxyribonucleic acid copy number variations associated with premature ovarian failure.

    Science.gov (United States)

    Aboura, Azzedine; Dupas, Claire; Tachdjian, Gérard; Portnoï, Marie-France; Bourcigaux, Nathalie; Dewailly, Didier; Frydman, René; Fauser, Bart; Ronci-Chaix, Nathalie; Donadille, Bruno; Bouchard, Philippe; Christin-Maitre, Sophie

    2009-11-01

    Premature ovarian failure (POF) is defined by amenorrhea of at least 4- to 6-month duration, occurring before 40 yr of age, with two FSH levels in the postmenopausal range. Its etiology remains unknown in more than 80% of cases. Standard karyotypes, having a resolution of 5-10 Mb, have identified critical chromosomal regions, mainly located on the long arm of the X chromosome. Array comparative genomic hybridization (a-CGH) analysis is able to detect submicroscopic chromosomal rearrangements with a higher genomic resolution. We searched for copy number variations (CNVs), using a-CGH analysis with a resolution of approximately 0.7 Mb, in a cohort of patients with POF. We prospectively included 99 women. Our study included a conventional karyotype and DNA microarrays comprising 4500 bacterial artificial chromosome clones spread on the entire genome. Thirty-one CNVs have been observed, three on the X chromosome and 28 on autosomal chromosomes. Data have been compared to control populations obtained from the Database of Genomic Variants (http://projects.tcag.ca/variation). Eight statistically significantly different CNVs have been identified in chromosomal regions 1p21.1, 5p14.3, 5q13.2, 6p25.3, 14q32.33, 16p11.2, 17q12, and Xq28. We report the first study of CNV analysis in a large cohort of Caucasian POF patients. In the eight statistically significant CNVs we report, we found five genes involved in reproduction, thus representing potential candidate genes in POF. The current study along with emerging information regarding CNVs, as well as data on their potential association with human diseases, emphasizes the importance of assessing CNVs in cohorts of POF women.

  3. Transcriptional profiles of hybrid Eucalyptus genotypes with contrasting lignin content reveal that monolignol biosynthesis-related genes regulate wood composition

    Directory of Open Access Journals (Sweden)

    Tomotaka eShinya

    2016-04-01

    Full Text Available Eucalyptus species constitutes the most widely planted hardwood trees in temperate and subtropical regions. In this study, we compared the transcript levels of genes involved in lignocellulose formation such as cellulose, hemicellulose and lignin biosynthesis in two selected three-year old hybrid Eucalyptus (Eucalyptus urophylla x E. grandis genotypes (AM063 and AM380 that have different lignin content. AM063 and AM380 had 20.2 and 35.5% of Klason lignin content and 59.0% and 48.2%, -cellulose contents, respectively. We investigated the correlation between wood properties and transcript levels of wood formation-related genes using RNA-seq with total RNAs extracted from developing xylem tissues at a breast height. Transcript levels of cell wall construction genes such as cellulose synthase (CesA and sucrose synthase (SUSY were almost the same in both genotypes. However, AM063 exhibited higher transcript levels of UDP-glucose pyrophosphorylase (UGP and xyloglucan endotransglucoxylase (XTH than those in AM380. Most monolignol biosynthesis- related isozyme genes showed higher transcript levels in AM380. These results indicate monolignol biosynthesis-related genes may regulate wood composition in Eucalyptus. Flavonoids contents were also observed at much higher levels in AM380 as a result of the elevated transcript levels of common phenylpropanoid pathway genes, phenylalanine ammonium lyase (PAL, cinnamate-4-hydroxylase (C4H and 4-coumarate-CoA ligase (4CL. Secondary plant cell wall formation is regulated by many transcription factors. We analyzed genes encoding NAC, WRKY, AP2/ERF and KNOX transcription factors and found higher transcript levels of these genes in AM380. We also observed increased transcription of some MYB and LIM domain transcription factors in AM380 compared to AM063. All these results show that genes related to monolignol biosynthesis may regulate the wood composition and help maintain the ratio of cellulose and lignin contents

  4. A populational survey of 45S rDNA polymorphism in the Jefferson salamander Ambystoma jeffersonianum revealed by fluorescence in situ hybridization (FISH)

    Institute of Scientific and Technical Information of China (English)

    Ke BI; James P.BOGART; Jinzhong FU

    2009-01-01

    The chromosomal localization of 45S ribosomal RNA genes in Ambystoma jeffersonianum was determined by fluorescence in situ hybridization with 18S rDNA fragment as a probe (FISH-rDNA). Our results revealed the presence of rDNA polymorphism among A.jeffersonianum populations in terms of number, location and FISH signal intensity on the chromosomes. Nine rDNA cytotypes were found in ten geographically isolated populations and most of them contained derivative rDNA sites. Our preliminary study provides strong indication of karyotypic diversification of A.jeffersonianum that is demonstrated by intraspecific variation of 45S rDNA cytotypes. rDNA cytotype polymorphism has been described in many other caudate amphibians. We predict that habitat isolation, low dispersal ability and decline of effective population size could facilitate the fixation and accumulation of variable rDNA cytotypes during their chromosome evolution [Current Zoology 55(2):145-149,2009].

  5. A populational survey of 45S rDNA polymorphism in the Jefferson salamander Ambystoma jeffersonianum revealed by fluorescence in situ hybridization (FISH

    Directory of Open Access Journals (Sweden)

    Jinzhong FU

    2009-04-01

    Full Text Available The chromosomal localization of 45S ribosomal RNA genes in Ambystoma jeffersonianum was determined by fluorescence in situ hybridization with 18S rDNA fragment as a probe (FISH-rDNA. Our results revealed the presence of rDNA polymorphism among A.jeffersonianum populations in terms of number, location and FISH signal intensity on the chromosomes. Nine rDNA cytotypes were found in ten geographically isolated populations and most of them contained derivative rDNA sites. Our preliminary study provides strong indication of karyotypic diversification of A.jeffersonianum that is demonstrated by intraspecific variation of 45S rDNA cytotypes. rDNA cytotype polymorphism has been described in many other caudate amphibians. We predict that habitat isolation, low dispersal ability and decline of effective population size could facilitate the fixation and accumulation of variable rDNA cytotypes during their chromosome evolution.

  6. Suppression subtractive hybridization profiles of radial growth phase and metastatic melanoma cell lines reveal novel potential targets

    Directory of Open Access Journals (Sweden)

    Espreafico Enilza M

    2008-01-01

    Full Text Available Abstract Background Melanoma progression occurs through three major stages: radial growth phase (RGP, confined to the epidermis; vertical growth phase (VGP, when the tumor has invaded into the dermis; and metastasis. In this work, we used suppression subtractive hybridization (SSH to investigate the molecular signature of melanoma progression, by comparing a group of metastatic cell lines with an RGP-like cell line showing characteristics of early neoplastic lesions including expression of the metastasis suppressor KISS1, lack of αvβ3-integrin and low levels of RHOC. Methods Two subtracted cDNA collections were obtained, one (RGP library by subtracting the RGP cell line (WM1552C cDNA from a cDNA pool from four metastatic cell lines (WM9, WM852, 1205Lu and WM1617, and the other (Met library by the reverse subtraction. Clones were sequenced and annotated, and expression validation was done by Northern blot and RT-PCR. Gene Ontology annotation and searches in large-scale melanoma expression studies were done for the genes identified. Results We identified 367 clones from the RGP library and 386 from the Met library, of which 351 and 368, respectively, match human mRNA sequences, representing 288 and 217 annotated genes. We confirmed the differential expression of all genes selected for validation. In the Met library, we found an enrichment of genes in the growth factors/receptor, adhesion and motility categories whereas in the RGP library, enriched categories were nucleotide biosynthesis, DNA packing/repair, and macromolecular/vesicular trafficking. Interestingly, 19% of the genes from the RGP library map to chromosome 1 against 4% of the ones from Met library. Conclusion This study identifies two populations of genes differentially expressed between melanoma cell lines from two tumor stages and suggests that these sets of genes represent profiles of less aggressive versus metastatic melanomas. A search for expression profiles of melanoma in

  7. Experiments, modeling and simulation of the magnetic behavior of inhomogeneously coated nickel/aluminum hybrid foams

    Energy Technology Data Exchange (ETDEWEB)

    Jung, A., E-mail: anne.jung@mx.uni-saarland.de [Universität des Saarlandes, Institute of Applied Mechanics, Campus A4 2, 66123 Saarbrücken (Germany); Klis, D., E-mail: d.klis@lte.uni-saarland.de [Universität des Saarlandes, Laboratory for Electromagnetic Theory, Campus C6 3, 66123 Saarbrücken (Germany); Goldschmidt, F., E-mail: f.goldschmidt@mx.uni-saarland.de [Universität des Saarlandes, Institute of Applied Mechanics, Campus A4 2, 66123 Saarbrücken (Germany)

    2015-03-15

    Open-cell metal foams are used as lightweight construction elements, energy absorbers or as support for catalytic coatings. Coating of open-cell metal foams is not only used for catalytic applications, but it leads also to tremendous increase in stiffness and energy absorption capacity. A non-line of sight coating technique for complex 3D structures is electrodeposition. Unfortunately, due to the 3D porosity and the related problems in mass transport limitation during the deposition, it is not possible to produce homogeneously coated foams. In the present contribution, we present a semi-non-destructive technique applicable to determine the coating thickness distribution of magnetic coatings by measuring the remanent magnetic field of coated foams. In order to have a closer look at the mass transport mechanism, a numerical model was developed to predict the field scans for different coating thickness distributions in the foams. For long deposition times the deposition reaches a steady state whereas a Helmholtz equation is sufficient to predict the coating thickness distribution. The applied current density could be identified as the main influencing parameter. Based on the developed model, it is possible to improve the electrodeposition process and hence the homogeneity in the coating thickness of coated metal foams. This leads to enhanced mechanical properties of the hybrid foams and contributes to better and resource-efficient energy absorbers and lightweight materials. - Highlights: • Production of hybrid foams by electrodeposition of nickel on open-cell metal foams. • Magnetic field scans for visualization of spatial coating thickness distribution. • Modeling of magnetic fields of inhomogeneously coated hybrid foams. • Investigation of mass transport limitation during coating by a Helmholtz equation. • Increasing coating homogeneity by use of low current densities and deposition rates.

  8. Growth, straightness and survival at age 32 in a Pinus strobus x P. wallichiana F1 hybrid population (Experiment 2

    Directory of Open Access Journals (Sweden)

    Ioan Blada

    2013-07-01

    Full Text Available By using an incomplete factorial mating design between twenty Pinus strobus L. female and seven P. wallichiana Jack. male trees, a number of 34 full-sib families were obtained. The objective of this experiment was to combine the fast growing of the former species with moderately to high resistance to blister rust (Cronartium ribicola Fich. in Rabenh. of the latter one. The hybrid families were artificially inoculated at age two, and field planted at age four. The plantation took place within an old black current (Ribes nigrum L. heavy infected by blister rust. In order to provoke new infections, this time naturally, the pine rows were planted in between the black currant ones. Diameters at breast height, tree height, tree growth rate volume, stem straightness and tree survivals were the traits measured at age 32 from seed. The first trial thinning was simultaneously applied with the present measurements. The average tree survival was 74.8% in hybrids, 8.3% in Pinus strobus and 27.8% in P. wallichiana. Highly significant (p < 0.01 differences were found between hybrid families for all traits except stem straightness. Genetic coefficient of variation at family level was 13.7% for tree volume growth rate and 15.9% for tree survival, but only 2.1% for tree straightness. Broad-sense family heritability estimates were 0.530 for diameter at breast height, 0.596 for stem height, and 0.564 for stem volume growth rate, 0.166 for stem straightness, and 0.539 for tree survivals. Similarly, the individual tree narrow-sense heritability estimates were 0.138 for diameter at breast height, 0.209 for stem height, 0.149 for stem volume growth rate, and 0.022 for stem straightness. If the best 5, 10 and 15 of 34 families were selected, a genetic gain of 17.7%, 13.4% and 10.2%, respectively, may be achieved in tree survival or blister rust resistance. Similarly, if the best 5%, 10% and 15% individuals within the best hybrid families were selected, a genetic gain of

  9. Growth, straightness and survival at age 32 in a Pinus strobus x P. wallichiana F1 hybrid population (Experiment 2

    Directory of Open Access Journals (Sweden)

    Ioan Blada

    2013-05-01

    Full Text Available By using an incomplete factorial mating design between twentyPinus strobus L. female and seven P. wallichiana Jack. male trees, a number of 34 full-sib families were obtained. The objective of this experiment was to combine the fast growing of the former species with moderately to high resistance to blister rust (Cronartium ribicola Fich. in Rabenh. of the latter one. The hybrid families were artificially inoculated at age two, and field planted at age four. The plantation took place within an old black current (Ribes nigrum L. heavy infected by blister rust. In order to provoke new infections, this time naturally, the pine rows were planted in between theblack currant ones. Diameters at breast height, tree height, tree growth rate volume, stem straightness and tree survivals were the traits measured at age 32 from seed. The first trial thinning was simultaneously applied with the present measurements. The average tree survival was 74.8% in hybrids, 8.3% in Pinus strobus and 27.8% in P. wallichiana. Highly significant (p < 0.01 differences were found between hybrid families for all traits except stem straightness. Genetic coefficient of variation at family level was 13.7% fortree volume growth rate and 15.9% for tree survival, but only 2.1% for tree straightness. Broad-sense family heritability estimates were 0.530 for diameter at breast height, 0.596 for stem height, and 0.564 for stem volume growth rate, 0.166 for stem straightness, and 0.539 for tree survivals. Similarly, the individual tree narrow-sense heritability estimates were 0.138 for diameter at breast height, 0.209 for stem height, 0.149 for stem volume growth rate, and 0.022 for stem straightness. If the best 5, 10 and 15 of 34 families wereselected, a genetic gain of 17.7%, 13.4% and 10.2%, respectively, may be achieved in tree survival or blister rust resistance. Similarly, if the best 5%, 10% and 15% individuals within the best hybrid families were selected, a genetic gain of 4

  10. A Monte Carlo study to check the hadronic interaction models by a new EAS hybrid experiment in Tibet

    CERN Document Server

    Zhang, Ying; Jiang, L; Chen, D; Ding, L K; Shibata, M; Katayose, Y; Hotta, N; Ohnishi, M; Ouchi, T; Saito, T

    2013-01-01

    A new EAS hybrid experiment has been designed by constructing a YAC (Yangbajing Air shower Core) detector array inside the existing Tibet-III air shower array. The first step of YAC, called "YAC-I", consists of 16 plastic scintillator units (4 rows times 4 columns) each with an area of 40 cm * 50 cm which is used to check hadronic interaction models used in AS simulations. A Monte Carlo study shows that YAC-I can record high energy electromagnetic component in the core region of air showers induced by primary particles of several tens TeV energies where the primary composition is directly measured by space experiments. It may provide a direct check of the hadronic interaction models currently used in the air shower simulations in the corresponding energy region. In present paper, the method of the observation and the sensitivity of the characteristics of the observed events to the different interaction models are discussed.

  11. Heating and current drive by fast wave in lower hybrid range of frequency on Versatile Experiment Spherical Torus

    Energy Technology Data Exchange (ETDEWEB)

    Kim, Sun-Ho, E-mail: shkim95@kaeri.re.kr [Korea Atomic Energy Research Institute, Daejeon (Korea, Republic of); Jeong, Seung-Ho [Korea Atomic Energy Research Institute, Daejeon (Korea, Republic of); Lee, Hyunwoo; Lee, Byungje [KwangWoon University, Seoul (Korea, Republic of); Jo, Jong-Gab; Lee, Hyun-Young; Hwang, Yong-Seok [Seoul National University, Seoul (Korea, Republic of)

    2016-11-01

    An efficient heating and current drive scheme in central or off-axis region is required to realize steady state operation of tokamak fusion reactor. And the fast wave in lower hybrid resonance range of frequency could be a candidate for such an efficient scheme in high density and high temperature plasmas. Its propagation and absorption characteristics including current drive and coupling efficiency are analyzed for Versatile Experiment Spherical Torus and it is shown that it is possible to drive current with considerable current drive efficiency in central region. The RF system for the fast wave experiment including klystron, transmission systems, inter-digital antenna, and RF diagnostics are given as well in this paper.

  12. The new hybrid thermal neutron facility at TAPIRO reactor for BNCT radiobiological experiments.

    Science.gov (United States)

    Esposito, J; Rosi, G; Agosteo, S

    2007-01-01

    A new thermal neutron irradiation facility, devoted to carry out both dosimetric and radiobiological studies on boron carriers, which are being developed in the framework of INFN BNCT project, has been installed at the ENEA Casaccia TAPIRO research fast reactor. The thermal column, based on an original, hybrid, neutron spectrum shifter configuration, has been recently become operative. In spite of its low power (5 kW), the new facility is able to provide a high thermal neutron flux level, uniformly distributed inside the irradiation cavity, with a quite low gamma background. The main features and preliminary benchmark measurements of the Beam-shaping assembly are here presented and discussed.

  13. Vacancy formation in MoO3: hybrid density functional theory and photoemission experiments

    KAUST Repository

    Salawu, Omotayo Akande

    2016-09-29

    Molybdenum oxide (MoO3) is an important material that is being considered for numerous technological applications, including catalysis and electrochromism. In the present study, we apply hybrid density functional theory to investigate O and Mo vacancies in the orthorhombic phase. We determine the vacancy formation energies of different defect sites as functions of the electron chemical potential, addressing different charge states. In addition, we investigate the consequences of defects for the material properties. Ultraviolet photoemission spectroscopy is employed to study the valence band of stoichiometric and O defective MoO3. We show that O vacancies result in occupied in-gap states.

  14. Characterisation of the BCM1F Analog Opto Hybrids for the CMS experiment

    CERN Document Server

    Srinidhi, Bheesette

    2013-01-01

    The BCM1F system in the CMS detector is used for measuring the beam-background and more importantly the real time luminosity and sits 1.8 m from the interaction point (IP5).There has been a proposal to upgrade the BCM1F when it would be installed for the LHC run in 2014. The BCM1F is fitted with Analog Opto-Hybrid(AOH) boards which consists of three Linear Laser Drivers (LLD) and three laser diodes. These AOH boards are affected by radiation and temperature in a long term and short term respectively. This paper studies the characteristics and behavior of these AOH boards.

  15. Characterisation of the BCM1F Analog Opto Hybrids for the CMS experiment

    CERN Document Server

    Bheesette, Srinidhi

    2013-01-01

    The BCM1F system used in the CMS is used for measuring the beam-background and more importantly the real time luminosity and sits 1.8 m from the interaction point (IP5).There has been a proposal to upgrade the BCM1F when it would be installed for the LHC run in 2014. The BCM1F is fitted with Analog Opto-Hybrid(AOH) boards which consists of three Linear Laser Drivers (LLD) and three laser diodes. These AOH boards are affected by radiation and temperature in a long term and short term respectively. This paper studies the characteristics and behavior of these AOH boards.

  16. GeoNeoLogical novel and other hybrimedia experiments: or how to use hybrid methods such as Hybrid Discourse Analysis (HDA within a knowledge base

    Directory of Open Access Journals (Sweden)

    Andrade, Pedro

    2016-07-01

    Full Text Available In this essay I will present some results of the project Public Communication of Art, which developed a seminal theory and methodology intended to cope with hybridity and new media literacy in our globalized and inter/transcultural world. Some of the methods used blend vision with touch and are called ‘hybrid methods’ or ‘hybrimethods’. Examples of these are, for instance, a Multitouch Interactive Table, a Multitouch Questionnaire, Trichotomies Game and GeoNeoLogic Novel, this last one being a hybrid novel activated by fusion of vision, touch and GPS coordinates. Another hybrimethod is a sort of discursive analysis, named Hybrid Discourse Analysis (HDA, which uses ‘semantic-logical networks’ organized by concepts and ‘relation-concepts’. HDA is here articulated with Critical Sociology and applied to the analysis of a text on Magic Realism, which is also a hybrid genre within the social field of literature.

  17. Growth, straightness and survival at age 32 in a Pinus strobus x P. wallichiana F1 hybrid population (Experiment 1

    Directory of Open Access Journals (Sweden)

    Ioan Blada

    2013-12-01

    Full Text Available An interspecific factorial hybridization was made, where seven P. strobus female parent trees were mated to four P. wallichiana male trees, in order to transfer genes for resistance to blister-rust from the blue pine to the F1 hybrids. The hybrid seedlings and the open pollinated families of the two parents were three times consecutively inoculated with blister-rust. The six years old seedlings were transplanted in the fi eld in the so called Valiug Experiment 1. The experimental design consisted in 28 hybrid full-sib families and two open pollinated families of the parent species. Plantation took place in a complete randomized block design with three blocks, with 6 to 12 seedlings per linear plot and 3 x 3 m spacing. This paper is based on the measurements made at age 32, just after the fi rst thinning. Diameter at breast height, tree height, tree volume, stem straightness and tree survival were the fi ve measured traits. According to ANOVA, signifi cant (p < 0.05 and highly signifi cant (p < 0.001 differences for diameter at breast height, tree height, volume growth rate, stem straightness and tree survival were detected between hybrid families. Highly signifi cant (p< 0.01, p < 0.001 differences were found between eastern white pine female parents for survival, stem straightness and all growth traits, suggesting that nuclear additive genes are controlling the respective characters. Consequently, high survival or genetic resistance to blister-rust can be found within the P. strobus species even though it is highly susceptible to this pathogen. The P. wallichiana parents exhibited signifi cant additive effects on straightness and breast height diameter, but no signifi cance in height, volume, and tree survival. The contribution of the additive variance to the phenotypic one was 65.7% for diameter, 58.6% for height, 50.5% for volume, 70.4% for stem straightness and 73.4% for tree survival. Hence, additive variance should be employed

  18. Growth, straightness and survival at age 32 in a Pinus strobus x P. wallichiana F1 hybrid population (Experiment 1

    Directory of Open Access Journals (Sweden)

    Ioan Blada

    2013-12-01

    Full Text Available An interspecific factorial hybridization was made, where seven P. strobus female parent trees were mated to four P. wallichiana male trees, in order to transfer genes for resistance to blister-rust from the blue pine to the F1 hybrids. The hybrid seedlings and the open pollinated families of the two parents were three times consecutively inoculated with blister-rust. The six years old seedlings were transplanted in the fi eld in the so called Valiug Experiment 1. The experimental design consisted in 28 hybrid full-sib families and two open pollinated families of the parent species. Plantation took place in a complete randomized block design with three blocks, with 6 to 12 seedlings per linear plot and 3 x 3 m spacing. This paper is based on the measurements made at age 32, just after the fi rst thinning. Diameter at breast height, tree height, tree volume, stem straightness and tree survival were the fi ve measured traits. According to ANOVA, signifi cant (p < 0.05 and highly signifi cant (p < 0.001 differences for diameter at breast height, tree height, volume growth rate, stem straightness and tree survival were detected between hybrid families. Highly signifi cant (p< 0.01, p < 0.001 differences were found between eastern white pine female parents for survival, stem straightness and all growth traits, suggesting that nuclear additive genes are controlling the respective characters. Consequently, high survival or genetic resistance to blister-rust can be found within the P. strobus species even though it is highly susceptible to this pathogen. The P. wallichiana parents exhibited signifi cant additive effects on straightness and breast height diameter, but no signifi cance in height, volume, and tree survival. The contribution of the additive variance to the phenotypic one was 65.7% for diameter, 58.6% for height, 50.5% for volume, 70.4% for stem straightness and 73.4% for tree survival. Hence, additive variance should be employed

  19. Using Negative Emotions to Trace the Experience of Borderline Personality Pathology: Interconnected Relationships Revealed in an Experience Sampling Study.

    Science.gov (United States)

    Law, Mary Kate; Fleeson, William; Arnold, Elizabeth Mayfield; Furr, R Michael

    2016-02-01

    While emotional difficulties are highly implicated in borderline personality disorder (BPD), the dynamic relationships between emotions and BPD symptoms that occur in everyday life are unknown. The current paper examined the function of negative emotions as they relate to BPD symptoms in real time. Experience sampling methodology with 281 participants measured negative emotions and borderline symptoms, expressed as a spectrum of experiences, five times daily for two weeks. Overall, having a BDP diagnosis was associated with experiencing more negative emotions. Multilevel modeling supported positive concurrent relationships between negative emotions and BPD symptoms. Lagged models showed that even after 3 hours negative emotions and several symptoms continued to influence each other. Therefore, results indicated that negative emotions and BPD symptoms are intricately related; some evidenced long-lasting relationships. This research supports emotion-symptom contingencies within BPD and provides insight regarding the reactivity and functionality of negative emotions in borderline pathology.

  20. Excited state and charge dynamics of hybrid organic/inorganic heterojunctions. II. Experiment

    Science.gov (United States)

    Panda, Anurag; Renshaw, C. Kyle; Oskooi, Ardavan; Lee, Kyusang; Forrest, Stephen R.

    2014-07-01

    In our companion paper (Paper I) [C. K. Renshaw and S. R. Forrest, Phys. Rev. B 90, 045302 (2014), 10.1103/PhysRevB.90.045302], we developed a model for charge transport and photogeneration at hybrid organic/inorganic semiconductor heterojunctions (OI-HJs). Here we apply the model to two planar bilayer hybrid photovoltaic devices: the first using the wide-band gap n-TiO2 in combination with the hole transporting tetraphenyl-dibenzoperiflanthene (DBP), and the second based on the moderate-band gap n-InP and the hole transporting pentacene (PEN). We measure the external quantum efficiency (EQE) and current density vs voltage (J-V) characteristics of both devices as functions of temperature. The EQE spectra for both TiO2/DBP and InP/PEN provide convincing evidence that Frenkel states generated in the organic form hybrid charge transfer excitons (HCTEs) at the OI-HJ that are subsequently dissociated into free charges, and then collected at the opposing electrodes. The dissociation efficiency is found to be strongly influenced by the presence of surface states, particularly in the InP/PEN device. We further develop the J-V model from Paper I to include an analytical expression for space-charge effects in the organic at high currents. Model fits to the J-V data suggest that the temperature-dependent hole mobilities in both DBP and PEN result in increasing space-charge effects at low temperatures. Furthermore, we find that the J-V characteristics of the TiO2/DBP device both in the dark and under illumination are governed by interface recombination. In contrast, the dark current in the InP/PEN device is governed by injection over the OI-HJ barrier, whereas the photocurrent is dominated by interface recombination. This work elucidates the role of the HCTE state in photogeneration, and the applicability of our model to a range of important optoelectronic devices.

  1. Hybrid perovskite solar cells: In situ investigation of solution-processed PbI2 reveals metastable precursors and a pathway to producing porous thin films

    KAUST Repository

    Barrit, Dounya

    2017-04-17

    The successful and widely used two-step process of producing the hybrid organic-inorganic perovskite CH3NH3PbI3, consists of converting a solution deposited PbI2 film by reacting it with CH3NH3I. Here, we investigate the solidification of PbI2 films from a DMF solution by performing in situ grazing incidence wide angle X-ray scattering (GIWAXS) measurements. The measurements reveal an elaborate sol–gel process involving three PbI2⋅DMF solvate complexes—including disordered and ordered ones—prior to PbI2 formation. The ordered solvates appear to be metastable as they transform into the PbI2 phase in air within minutes without annealing. Morphological analysis of air-dried and annealed films reveals that the air-dried PbI2 is substantially more porous when the coating process produces one of the intermediate solvates, making this more suitable for subsequent conversion into the perovskite phase. The observation of metastable solvates on the pathway to PbI2 formation open up new opportunities for influencing the two-step conversion of metal halides into efficient light harvesting or emitting perovskite semiconductors.

  2. From Hybrid to Actively-Controlled Gas Lubricated Bearings – Theory and Experiment

    DEFF Research Database (Denmark)

    Morosi, Stefano

    bearings, tilting pad and flexure pivot gas bearings. These solutions proved to be effective in improving static and dynamic properties of the bearings, however issues related to the manufacturing and accuracy of predictions has so far limited their applications. Another drawback is that passive bearings...... offer a low degree of robustness, meaning that an accurate optimization is necessary for each application. Another way of improving gas bearings operation performance is by using active control systems, transforming conventional gas bearings in an electro-mechanical machine component. In this framework......-rig are backed by a comprehensive mathematical model that couples a finite element model of a flexible rotor, a thermohydrodynamic model based on a modified form of the Reynold’s equation for hybrid aerostatic-aerodynamic lubrication of compressible fluid, a piezoelectric injection system and a proportional...

  3. Investigation of lower hybrid physics through power modulation experiments on Alcator C-Moda)

    Science.gov (United States)

    Schmidt, A.; Bonoli, P. T.; Meneghini, O.; Parker, R. R.; Porkolab, M.; Shiraiwa, S.; Wallace, G.; Wright, J. C.; Harvey, R. W.; Wilson, J. R.

    2011-05-01

    Lower hybrid current drive (LHCD) is an attractive tool for off-axis current profile control in magnetically confined tokamak plasmas and burning plasmas (ITER), because of its high current drive efficiency. The LHCD system on Alcator C-Mod operates at 4.6 GHz, with ~ 1 MW of coupled power, and can produce a wide range of launched parallel refractive index (n||) spectra. A 32 chord, perpendicularly viewing hard x-ray camera has been used to measure the spatial and energy distribution of fast electrons generated by lower hybrid (LH) waves. Square-wave modulation of LH power on a time scale much faster than the current relaxation time does not significantly alter the poloidal magnetic field inside the plasma and thus allows for realistic modeling and consistent plasma conditions for different n|| spectra. Inverted hard x-ray profiles show clear changes in LH-driven fast electron location with differing n||. Boxcar binning of hard x-rays during LH power modulation allows for ~ 1 ms time resolution which is sufficient to resolve the build-up, steady-state, and slowing-down phases of fast electrons. Ray-tracing/Fokker-Planck modeling in combination with a synthetic hard x-ray diagnostic shows quantitative agreement with the x-ray data for high n|| cases. The time histories of hollow x-ray profiles have been used to measure off-axis fast electron transport in the outer half of the plasma, which is found to be small on a slowing down time scale.

  4. ISSR and isozyme characterization of androgenetic dihaploids reveals tetrasomic inheritance in tetraploid somatic hybrids between Solanum melongena and Solanum aethiopicum group Gilo.

    Science.gov (United States)

    Toppino, Laura; Mennella, Giuseppe; Rizza, Fulvia; D'Alessandro, Antonietta; Sihachakr, Darasinh; Rotino, Giuseppe L

    2008-01-01

    Gene exchanges between Solanum melongena and its allied relative Solanum aethiopicum are a crucial prerequisite for introgression of useful traits from the allied species into the cultivated eggplant. In order to evaluate the extent of genetic recombination between the 2 species, biochemical and molecular markers were employed. A dihaploid population obtained through anther culture of the corresponding tetraploid somatic hybrids was genetically analyzed. The extent of disomic/tetrasomic inheritance and segregation ratios of 3 isozyme systems and intersimple sequence repeat (ISSR) markers were evaluated. The dihaploids, being derived from microspores, allowed for simple, complete, and accurate analyses. The segregation of 280 ISSR markers (110 aethiopicum-specific, 104 melongena-specific, and 66 monomorphic) were evaluated in 71 dihaploids. According to the genetic constitution (simplex/duplex/triplex), almost 64% of the fragments revealed the tetrasomic and/or disomic inheritance. With regard to the assigned species-specific fragments, 68% and 4% were unambiguously the result of tetrasomic and disomic inheritance, respectively. Twenty-four of the 66 monomorphic ISSRs were inherited according to random chromatid segregation. The phenotypes of glucose-6-phosphate dehydrogenase (G-6-PDH), 6-phosphogluconate dehydrogenase (6-PGDH), and shikimate dehydrogenase (SKDH) were studied in 70 dihaploids and inferences were made about the allelic state of their 5 loci. The isozyme markers segregated in the dihaploids in a distorted manner, their segregations did not fit in with any of the expected segregation ratios. However, tetrasomic inheritance might be suggested for G-6-PDH 2 and SKDH 1 loci. Our results demonstrated that gene exchanges occurred readily in the somatic hybrids between S. melongena and S. aethiopicum gr. Gilo.

  5. Combined array-comparative genomic hybridization and single-nucleotide polymorphism-loss of heterozygosity analysis reveals complex genetic alterations in cervical cancer

    Directory of Open Access Journals (Sweden)

    Kenter Gemma G

    2007-02-01

    Full Text Available Abstract Background Cervical carcinoma develops as a result of multiple genetic alterations. Different studies investigated genomic alterations in cervical cancer mainly by means of metaphase comparative genomic hybridization (mCGH and microsatellite marker analysis for the detection of loss of heterozygosity (LOH. Currently, high throughput methods such as array comparative genomic hybridization (array CGH, single nucleotide polymorphism array (SNP array and gene expression arrays are available to study genome-wide alterations. Integration of these 3 platforms allows detection of genomic alterations at high resolution and investigation of an association between copy number changes and expression. Results Genome-wide copy number and genotype analysis of 10 cervical cancer cell lines by array CGH and SNP array showed highly complex large-scale alterations. A comparison between array CGH and SNP array revealed that the overall concordance in detection of the same areas with copy number alterations (CNA was above 90%. The use of SNP arrays demonstrated that about 75% of LOH events would not have been found by methods which screen for copy number changes, such as array CGH, since these were LOH events without CNA. Regions frequently targeted by CNA, as determined by array CGH, such as amplification of 5p and 20q, and loss of 8p were confirmed by fluorescent in situ hybridization (FISH. Genome-wide, we did not find a correlation between copy-number and gene expression. At chromosome arm 5p however, 22% of the genes were significantly upregulated in cell lines with amplifications as compared to cell lines without amplifications, as measured by gene expression arrays. For 3 genes, SKP2, ANKH and TRIO, expression differences were confirmed by quantitative real-time PCR (qRT-PCR. Conclusion This study showed that copy number data retrieved from either array CGH or SNP array are comparable and that the integration of genome-wide LOH, copy number and gene

  6. Understanding Biases in Ribosome Profiling Experiments Reveals Signatures of Translation Dynamics in Yeast.

    Directory of Open Access Journals (Sweden)

    Jeffrey A Hussmann

    2015-12-01

    Full Text Available Ribosome profiling produces snapshots of the locations of actively translating ribosomes on messenger RNAs. These snapshots can be used to make inferences about translation dynamics. Recent ribosome profiling studies in yeast, however, have reached contradictory conclusions regarding the average translation rate of each codon. Some experiments have used cycloheximide (CHX to stabilize ribosomes before measuring their positions, and these studies all counterintuitively report a weak negative correlation between the translation rate of a codon and the abundance of its cognate tRNA. In contrast, some experiments performed without CHX report strong positive correlations. To explain this contradiction, we identify unexpected patterns in ribosome density downstream of each type of codon in experiments that use CHX. These patterns are evidence that elongation continues to occur in the presence of CHX but with dramatically altered codon-specific elongation rates. The measured positions of ribosomes in these experiments therefore do not reflect the amounts of time ribosomes spend at each position in vivo. These results suggest that conclusions from experiments in yeast using CHX may need reexamination. In particular, we show that in all such experiments, codons decoded by less abundant tRNAs were in fact being translated more slowly before the addition of CHX disrupted these dynamics.

  7. Design, Fabrication, and Characteristic Experiment of a Hybrid Electromagnet for Bottom-mounted Control Rod Drive Mechanism

    Energy Technology Data Exchange (ETDEWEB)

    Huh, Hyung; Lee, Jin-Haeng; Yoo, Yeon-Sik; Cho, Yeong-Garp; Ryu, Jeong-Soo [Korea Atomic Energy Research Institute, Daejeon (Korea, Republic of)

    2015-05-15

    A control rod drive mechanism (CRDM) is located in the reactor pool top (Top-mounted) or a reactivity control mechanism room under the reactor pool bottom (Bottom-mounted). The function of the CRDM is to insert, withdraw, or maintain neutron absorbing material at any required position in the reactor core in order to keep reactivity control of the core. There are so many kinds of CRDMs, such as magnetic-jack type, hydraulic type, rack and pinion type, chain type, and linear or rotary step motor and so on. As a part of a new project, we have completed the design, fabrication, and characteristic experiment of the prototype bottom-mounted CRDM (BMCRDM). The measured carrying capacity of proto-type hybrid electromagnet is approximately 2.8 (kgf) larger than that of 3D-FEM result. The major reasons of the disagreement between the measured and calculated results are as follows. A. B-H Curve differences of ferromagnetic materials B. Fabrication tolerance and the measured maximum temperature at the center of winding for proto-type hybrid electromagnet, 106 .deg. C, appeared to be 5 .deg. C higher than the analytical result. The major reasons of the disagreement between the measured and calculated results are as follows. A. Difficult for exact modeling of winding including impregnated epoxy, coil insulator, and isolator.

  8. Wide Variety of Experiments Using a Cryogen-Free 27.5 T Hybrid Magnet and a Cryogen-Free 18.1 T Superconducting Magnet

    Science.gov (United States)

    Watanabe, K.; Awaji, S.; Oguro, H.

    2013-03-01

    A cryogen-free hybrid magnet without liquid helium for operation, generating 27.5 T in a 32 mm room temperature bore of an 8 MW water-cooled resistive insert magnet in an 8.5 T background field of a cryogen-free superconducting outsert magnet, is being operated for basic research at low temperatures down to 17 mK in combination with a dilution refrigerator. In addition, we are developing functional materials using a differential thermal analysis DTA at high temperatures up to 1473 K in high fields up to 27 T. This cryogen-free hybrid magnet will be upgraded to generate 29 T by improving the outer superconducting magnet. A cryogen-free 18.1 T superconducting magnet with a 52 mm room temperature experimental bore, consisting of a Bi2Sr2Ca2Cu3O10 (Bi2223) insert coil, has been developed using a GM-JT cryocooler. Recently, bronze-tape-laminated Bi2223 has revealed excellent irreversible stress tolerance of 250 MPa at 77 K. In addition, the critical current properties for recent Bi2223 tapes are largely improved from 200 to 400 A/cm-width at 77 K in a self-field. Therefore, the stainless steel reinforcement tape incorporated for the previous Bi2223 insert coil is no longer needed for a new Bi2223 one. A new Bi2223 insert coil with almost the same size as the existing insert coil can generate two times higher fields at the elevated operation current from 162 to 191 A. An upgraded cryogen-free superconducting magnet can offer a long-term experiment at the constant magnetic field of 20 T for an in-field heat-treatment investigation.

  9. Analysis of Biostimulated Microbial Communities from Two Field Experiments Reveals Temporal and Spatial Differences in Proteome Profiles

    Energy Technology Data Exchange (ETDEWEB)

    Callister, Stephen J [Pacific Northwest National Laboratory (PNNL); Wilkins, Mike [University of California, Berkeley; Nicora, Carrie D. [Pacific Northwest National Laboratory (PNNL); Williams, Ken [Lawrence Berkeley National Laboratory (LBNL); Banfield, Jillian F. [University of California, Berkeley; Verberkmoes, Nathan C [ORNL; Hettich, Robert {Bob} L [ORNL; N' Guessan, A. Lucie [University of Massachusetts, Amherst; Mouser, Paula J [University of Massachusetts, Amherst; Elifantz, Hila [University of Massachusetts, Amherst; Smith, Richard D. [Pacific Northwest National Laboratory (PNNL); Lovley, Derek [University of Massachusetts, Amherst; Lipton, Mary S [Pacific Northwest National Laboratory (PNNL); Long, Phil [Pacific Northwest National Laboratory (PNNL)

    2010-01-01

    Stimulated by an acetate-amendment field experiment conducted in 2007, anaerobic microbial populations in the aquifer at the Rifle Integrated Field Research Challenge site in Colorado reduced mobile U(VI) to insoluble U(IV). During this experiment, planktonic biomass was sampled at various time points to quantitatively evaluate proteomes. In 2008, an acetateamended field experiment was again conducted in a similar manner to the 2007 experiment. As there was no comprehensive metagenome sequence available for use in proteomics analysis, we systematically evaluated 12 different organism genome sequences to generate sets of aggregate genomes, or pseudo-metagenomes , for supplying relative quantitative peptide and protein identifications. Proteomics results support previous observations of the dominance of Geobacteraceae during biostimulation using acetate as sole electron donor, and revealed a shift from an early stage of iron reduction to a late stage of iron reduction. Additionally,ashift from iron reduction to sulfate reduction was indicated by changes in the contribution of proteome information contributed by different organism genome sequences within the aggregate set. In addition, the comparison of proteome measurements made between the 2007 field experiment and 2008 field experiment revealed differences in proteome profiles. These differences may be the result of alterations in abundance and population structure within the planktonic biomass samples collected for analysis.

  10. Analysis of biostimulated microbial communities from two field experiments reveals temporal and spatial differences in proteome profiles

    Energy Technology Data Exchange (ETDEWEB)

    Callister, S.J.; Wilkins, M.J.; Nicora, C.D.; Williams, K.H.; Banfield, J.F.; VerBerkmoes, N.C.; Hettich, R.L.; NGuessan, A.L.; Mouser, P.J.; Elifantz, H.; Smith, R.D.; Lovley, D.R.; Lipton, M.S.; Long, P.E.

    2010-07-15

    Stimulated by an acetate-amendment field experiment conducted in 2007, anaerobic microbial populations in the aquifer at the Rifle Integrated Field Research Challenge site in Colorado reduced mobile U(VI) to insoluble U(IV). During this experiment, planktonic biomass was sampled at various time points to quantitatively evaluate proteomes. In 2008, an acetate-amended field experiment was again conducted in a similar manner to the 2007 experiment. As there was no comprehensive metagenome sequence available for use in proteomics analysis, we systematically evaluated 12 different organism genome sequences to generate sets of aggregate genomes, or “pseudo-metagenomes”, for supplying relative quantitative peptide and protein identifications. Proteomics results support previous observations of the dominance of Geobacteraceae during biostimulation using acetate as sole electron donor, and revealed a shift from an early stage of iron reduction to a late stage of iron reduction. Additionally, a shift from iron reduction to sulfate reduction was indicated by changes in the contribution of proteome information contributed by different organism genome sequences within the aggregate set. In addition, the comparison of proteome measurements made between the 2007 field experiment and 2008 field experiment revealed differences in proteome profiles. These differences may be the result of alterations in abundance and population structure within the planktonic biomass samples collected for analysis.

  11. Pattern Analyses Reveal Separate Experience-Based Fear Memories in the Human Right Amygdala.

    Science.gov (United States)

    Braem, Senne; De Houwer, Jan; Demanet, Jelle; Yuen, Kenneth S L; Kalisch, Raffael; Brass, Marcel

    2017-08-23

    Learning fear via the experience of contingencies between a conditioned stimulus (CS) and an aversive unconditioned stimulus (US) is often assumed to be fundamentally different from learning fear via instructions. An open question is whether fear-related brain areas respond differently to experienced CS-US contingencies than to merely instructed CS-US contingencies. Here, we contrasted two experimental conditions where subjects were instructed to expect the same CS-US contingencies while only one condition was characterized by prior experience with the CS-US contingency. Using multivoxel pattern analysis of fMRI data, we found CS-related neural activation patterns in the right amygdala (but not in other fear-related regions) that dissociated between whether a CS-US contingency had been instructed and experienced versus merely instructed. A second experiment further corroborated this finding by showing a category-independent neural response to instructed and experienced, but not merely instructed, CS presentations in the human right amygdala. Together, these findings are in line with previous studies showing that verbal fear instructions have a strong impact on both brain and behavior. However, even in the face of fear instructions, the human right amygdala still shows a separable neural pattern response to experience-based fear contingencies.SIGNIFICANCE STATEMENT In our study, we addressed a fundamental problem of the science of human fear learning and memory, namely whether fear learning via experience in humans relies on a neural pathway that can be separated from fear learning via verbal information. Using two new procedures and recent advances in the analysis of brain imaging data, we localized purely experience-based fear processing and memory in the right amygdala, thereby making a direct link between human and animal research. Copyright © 2017 the authors 0270-6474/17/378116-15$15.00/0.

  12. The ARSQ 2.0 reveals age and personality effects on mind-wandering experiences

    NARCIS (Netherlands)

    Diaz, B Alexander; Van Der Sluis, Sophie; Benjamins, Jeroen S; Stoffers, Diederick; Hardstone, Richard; Mansvelder, Huibert D; Van Someren, Eus J W; Linkenkaer-Hansen, Klaus

    2014-01-01

    The human brain frequently generates thoughts and feelings detached from environmental demands. Investigating the rich repertoire of these mind-wandering experiences is challenging, as it depends on introspection and mapping its content requires an unknown number of dimensions. We recently developed

  13. A replicated climate change field experiment reveals rapid evolutionary response in an ecologically important soil invertebrate

    DEFF Research Database (Denmark)

    Bataillon, Thomas; Galtier, Nicolas; Bernard, Aurelien

    2016-01-01

    Whether species can respond evolutionarily to current climate change is crucial for the persistence of many species. Yet, very few studies have examined genetic responses to climate change in manipulated experiments carried out innatural field conditions. We examined the evolutionary response to ...

  14. The ARSQ 2.0 reveals age and personality effects on mind-wandering experiences

    NARCIS (Netherlands)

    Diaz, B Alexander; Van Der Sluis, Sophie; Benjamins, Jeroen S; Stoffers, Diederick; Hardstone, Richard; Mansvelder, Huibert D; Van Someren, Eus J W; Linkenkaer-Hansen, Klaus

    2014-01-01

    The human brain frequently generates thoughts and feelings detached from environmental demands. Investigating the rich repertoire of these mind-wandering experiences is challenging, as it depends on introspection and mapping its content requires an unknown number of dimensions. We recently developed

  15. Auditory processing and audiovisual integration revealed by combining psychophysical and fMRI experiments

    NARCIS (Netherlands)

    Tomaskovic, Sonja

    2006-01-01

    This thesis describes experiments conducted in order to investigate human perception and processing of the sound in the human brain. There are several stages in the sound processing. Firstly, in the ear, sound is recorded and transformed into the electrical signal, then information is transported to

  16. Thomson scattering diagnostic system design for the Compact Toroidal Hybrid experiment

    Energy Technology Data Exchange (ETDEWEB)

    Traverso, P. J., E-mail: pjt0002@auburn.edu; Maurer, D. A.; Ennis, D. A.; Hartwell, G. J.; Goforth, M. M.; Loch, S. D.; Pearce, A. J.; Cianciosa, M. R. [Physics Department, Auburn University, Auburn, Alabama 36849 (United States)

    2014-11-15

    A new Thomson scattering system using standard commercially available components has been designed for the non-axisymmetric plasmas of the Compact Toroidal Hybrid (CTH). The beam, generated by a frequency doubled Continuum PL DLS 2 J Nd:YAG laser, is passed vertically through an entrance Brewster window and an aperturing baffle system to minimize the stray laser light that could enter the collection optics. The beam line has been designed with an 8 m propagation distance to the mid-plane of the CTH device with the beam diameter kept less than 3 mm inside the plasma volume. The beam exits the vacuum system through another Brewster window and enters a beam dump, again to minimize the stray light in the vacuum chamber. Light collection, spectral processing, and signal detection are accomplished with an f/#∼ 1 aspheric lens, a commercially available Holospec f/1.8 spectrometer, and an Andor iStar DH740-18U-C3 image intensified camera. Spectral rejection of stray laser light, if needed, can be performed with the use of an optional interference filter at the spectrometer input. The system has been developed for initial single point measurements of plasmas with core electron temperatures of approximately 20–300 eV and densities of 5 × 10{sup 18} to 5 × 10{sup 19} m{sup −3} dependent upon operational scenario.

  17. Design and implementation of a Thomson scattering diagnostic for the Compact Toroidal Hybrid Experiment

    Science.gov (United States)

    Traverso, P. J.; Maurer, D. A.; Ennis, D. A.; Hartwell, G. J.; Goforth, M. M.; Loch, S. D.; Pearce, A. J.; Cianciosa, M. R.

    2014-10-01

    A Thomson scattering system using standard commercially available components has been designed for the non-axisymmetric plasmas of the Compact Toroidal Hybrid (CTH). The initial system takes a single point measurement and will be used to assess options for an upgrade to a multi-point system providing electron temperature and density profiles. This single point measurement will reduce the uncertainty in the reconstructed peak pressure by an order of magnitude for both ohmically driven, current-carrying plasmas and future gyrotron-heated stellarator plasmas. A principle design goal is to minimize stray laser light, geometrically on the machine side and spectrally on the collection side, to allow measurements of both full and half Thomson scattered spectral profiles. The beam, generated by a frequency doubled Continuum 2 J Nd:YaG laser, is passed vertically through an entrance Brewster window and an aperturing baffle system to minimize stray light. Light collection, spectral processing, and signal detection are accomplished with an f / # ~ 1 aspheric lens, a Holospec f/1.8 spectrometer, and an Andor iStar DH740-18U-C3 image intensified camera. The estimated number of scattered photons per channel will be of the order of 5 ×103 with a signal to noise ratio of S / N = 19 This work is supported by U.S. Department of Energy Grant No. DE-FG02-00ER54610.

  18. A replicated climate change field experiment reveals rapid evolutionary response in an ecologically important soil invertebrate

    DEFF Research Database (Denmark)

    Bataillon, Thomas; Galtier, Nicolas; Bernard, Aurelien

    2016-01-01

    Whether species can respond evolutionarily to current climate change is crucial for the persistence of many species. Yet, very few studies have examined genetic responses to climate change in manipulated experiments carried out innatural field conditions. We examined the evolutionary response...... to climate change in a common annelid worm using a controlled replicated experiment where climatic conditions were manipulated in a natural setting. Analyzing the transcribed genome of 15 local populations, we found that about 12% of the genetic polymorphisms exhibit differences in allele frequencies...... associated to changes in soil temperature and soil moisture. This shows an evolutionaryresponse to realistic climate change happening over short-time scale, and calls for incorporating evolution into modelspredicting future response of species to climate change. It also shows that designed climate change...

  19. The ARSQ 2.0 reveals age and personality effects on mind-wandering experiences

    OpenAIRE

    2014-01-01

    The human brain frequently generates thoughts and feelings detached from environmental demands. Investigating the rich repertoire of these mind-wandering experiences is challenging, as it depends on introspection and mapping its content requires an unknown number of dimensions. We recently developed a retrospective self-report questionnaire—the Amsterdam Resting-State Questionnaire (ARSQ)—which quantifies mind wandering along seven dimensions: “Discontinuity of Mind,” “Theory of Mind,” “Self,...

  20. Adolescent maternity in a low income community: experiences revealed by oral history

    OpenAIRE

    Luiza Akiko Komura Hoga

    2008-01-01

    Adolescent maternity involves relevant factors associated with each family, culture and society. This research aimed to describe the experiences in the trajectory of adolescent maternity. The oral history method was used, obtaining the narratives of 21 adolescent mothers living in a low income community located in São Paulo City, Brazil. The following descriptive categories emerged from the narratives: Pregnancy: an event in the initial phase of the relationship; Insufficient knowledge and ac...

  1. Field-scale experiments reveal persistent yield gaps in low-input and organic cropping systems

    Science.gov (United States)

    Kravchenko, Alexandra N.; Snapp, Sieglinde S.; Robertson, G. Philip

    2017-01-01

    Knowledge of production-system performance is largely based on observations at the experimental plot scale. Although yield gaps between plot-scale and field-scale research are widely acknowledged, their extent and persistence have not been experimentally examined in a systematic manner. At a site in southwest Michigan, we conducted a 6-y experiment to test the accuracy with which plot-scale crop-yield results can inform field-scale conclusions. We compared conventional versus alternative, that is, reduced-input and biologically based–organic, management practices for a corn–soybean–wheat rotation in a randomized complete block-design experiment, using 27 commercial-size agricultural fields. Nearby plot-scale experiments (0.02-ha to 1.0-ha plots) provided a comparison of plot versus field performance. We found that plot-scale yields well matched field-scale yields for conventional management but not for alternative systems. For all three crops, at the plot scale, reduced-input and conventional managements produced similar yields; at the field scale, reduced-input yields were lower than conventional. For soybeans at the plot scale, biological and conventional managements produced similar yields; at the field scale, biological yielded less than conventional. For corn, biological management produced lower yields than conventional in both plot- and field-scale experiments. Wheat yields appeared to be less affected by the experimental scale than corn and soybean. Conventional management was more resilient to field-scale challenges than alternative practices, which were more dependent on timely management interventions; in particular, mechanical weed control. Results underscore the need for much wider adoption of field-scale experimentation when assessing new technologies and production-system performance, especially as related to closing yield gaps in organic farming and in low-resourced systems typical of much of the developing world. PMID:28096409

  2. Correlates of perceptual awareness in human primary auditory cortex revealed by an informational masking experiment.

    Science.gov (United States)

    Wiegand, Katrin; Gutschalk, Alexander

    2012-05-15

    The presence of an auditory event may remain undetected in crowded environments, even when it is well above the sensory threshold. This effect, commonly known as informational masking, allows for isolating neural activity related to perceptual awareness, by comparing repetitions of the same physical stimulus where the target is either detected or not. Evidence from magnetoencephalography (MEG) suggests that auditory-cortex activity in the latency range 50-250 ms is closely coupled with perceptual awareness. Here, BOLD fMRI and MEG were combined to investigate at which stage in the auditory cortex neural correlates of conscious auditory perception can be observed. Participants were asked to indicate the perception of a regularly repeating target tone, embedded within a random multi-tone masking background. Results revealed widespread activation within the auditory cortex for detected target tones, which was delayed but otherwise similar to the activation of an unmasked control stimulus. The contrast of detected versus undetected targets revealed activity confined to medial Heschl's gyrus, where the primary auditory cortex is located. These results suggest that activity related to conscious perception involves the primary auditory cortex and is not restricted to activity in secondary areas.

  3. Installation of a Thomson scattering diagnostic on the Compact Toroidal Hybrid Experiment

    Science.gov (United States)

    Traverso, P. J.; Maurer, D. A.; Ennis, D. A.; Hartwell, G. J.; Cianciosa, M. R.

    2015-11-01

    A Thomson scattering system is being commissioned for the non-axisymmetric plasmas of the Compact Toroidal Hybrid (CTH), a five-field period current-carrying torsatron. The initial system takes a single point measurement on the magnetic axis and will be used to assess options for an expansion to a multi-point system to enable better 3D equilibrium reconstructions using the V3FIT code. A single point measurement will reduce the uncertainty in the reconstructed peak pressure by an order of magnitude for both current-carrying plasmas and future gyrotron-heated stellarator plasmas. The beam, generated by a frequency doubled Continuum 2 J, Nd:YaG laser, is passed vertically through an entrance Brewster window and a two-aperture optical baffle system to minimize stray light. The beam line is designed to propagate ~ 8 m to the mid-plane of the CTH device with the beam diameter < 3 mm inside the plasma volume. An Andor iStar DH740-18U-C3 image intensified CCD camera is used in conjunction with a Holospec f/1.8 spectrograph to collect the red-shifted scattered light from 532-580 nm. A single point system will initially measure plasmas with core electron temperatures of 100 to 200 eV and densities of 5 ×1018 to 5 ×1019 m-3. This work is supported by U.S. Department of Energy Grant No. DE-FG02-00ER54610.

  4. Fluorescence In Situ Hybridization (FISH-Based Karyotyping Reveals Rapid Evolution of Centromeric and Subtelomeric Repeats in Common Bean (Phaseolus vulgaris and Relatives

    Directory of Open Access Journals (Sweden)

    Aiko Iwata-Otsubo

    2016-04-01

    Full Text Available Fluorescence in situ hybridization (FISH-based karyotyping is a powerful cytogenetics tool to study chromosome organization, behavior, and chromosome evolution. Here, we developed a FISH-based karyotyping system using a probe mixture comprised of centromeric and subtelomeric satellite repeats, 5S rDNA, and chromosome-specific BAC clones in common bean, which enables one to unambiguously distinguish all 11 chromosome pairs. Furthermore, we applied the karyotyping system to several wild relatives and landraces of common bean from two distinct gene pools, as well as other related Phaseolus species, to investigate repeat evolution in the genus Phaseolus. Comparison of karyotype maps within common bean indicates that chromosomal distribution of the centromeric and subtelomeric satellite repeats is stable, whereas the copy number of the repeats was variable, indicating rapid amplification/reduction of the repeats in specific genomic regions. In Phaseolus species that diverged approximately 2–4 million yr ago, copy numbers of centromeric repeats were largely reduced or diverged, and chromosomal distributions have changed, suggesting rapid evolution of centromeric repeats. We also detected variation in the distribution pattern of subtelomeric repeats in Phaseolus species. The FISH-based karyotyping system revealed that satellite repeats are actively and rapidly evolving, forming genomic features unique to individual common bean accessions and Phaseolus species.

  5. Population structure and comparative genome hybridization of European flor yeast reveal a unique group of Saccharomyces cerevisiae strains with few gene duplications in their genome.

    Science.gov (United States)

    Legras, Jean-Luc; Erny, Claude; Charpentier, Claudine

    2014-01-01

    Wine biological aging is a wine making process used to produce specific beverages in several countries in Europe, including Spain, Italy, France, and Hungary. This process involves the formation of a velum at the surface of the wine. Here, we present the first large scale comparison of all European flor strains involved in this process. We inferred the population structure of these European flor strains from their microsatellite genotype diversity and analyzed their ploidy. We show that almost all of these flor strains belong to the same cluster and are diploid, except for a few Spanish strains. Comparison of the array hybridization profile of six flor strains originating from these four countries, with that of three wine strains did not reveal any large segmental amplification. Nonetheless, some genes, including YKL221W/MCH2 and YKL222C, were amplified in the genome of four out of six flor strains. Finally, we correlated ICR1 ncRNA and FLO11 polymorphisms with flor yeast population structure, and associate the presence of wild type ICR1 and a long Flo11p with thin velum formation in a cluster of Jura strains. These results provide new insight into the diversity of flor yeast and show that combinations of different adaptive changes can lead to an increase of hydrophobicity and affect velum formation.

  6. Population structure and comparative genome hybridization of European flor yeast reveal a unique group of Saccharomyces cerevisiae strains with few gene duplications in their genome.

    Directory of Open Access Journals (Sweden)

    Jean-Luc Legras

    Full Text Available Wine biological aging is a wine making process used to produce specific beverages in several countries in Europe, including Spain, Italy, France, and Hungary. This process involves the formation of a velum at the surface of the wine. Here, we present the first large scale comparison of all European flor strains involved in this process. We inferred the population structure of these European flor strains from their microsatellite genotype diversity and analyzed their ploidy. We show that almost all of these flor strains belong to the same cluster and are diploid, except for a few Spanish strains. Comparison of the array hybridization profile of six flor strains originating from these four countries, with that of three wine strains did not reveal any large segmental amplification. Nonetheless, some genes, including YKL221W/MCH2 and YKL222C, were amplified in the genome of four out of six flor strains. Finally, we correlated ICR1 ncRNA and FLO11 polymorphisms with flor yeast population structure, and associate the presence of wild type ICR1 and a long Flo11p with thin velum formation in a cluster of Jura strains. These results provide new insight into the diversity of flor yeast and show that combinations of different adaptive changes can lead to an increase of hydrophobicity and affect velum formation.

  7. A yeast two-hybrid screen reveals a strong interaction between the Legionella chaperonin Hsp60 and the host cell small heat shock protein Hsp10.

    Science.gov (United States)

    Nasrallah, Gheyath K

    2015-06-01

    L. pneumophila is an intracellular bacterium that replicates inside a membrane-bound vacuole called Legionella-containing vacuole (LCV), where it plentifully liberates its HtpB chaperonin. From LCV, HtpB reaches the host cell cytoplasm, where it interacts with SAMDC, a cytoplasmic protein required for synthesis of host polyamines that are important for intracellular growth of L. pneumophila. Additionally, cytoplasmic expression of HtpB in S. cerevisiae induces pseudohyphal growth, and in mammalian cells recruits mitochondria to LCV, and modifies actin microfilaments organization. This led us to hypothesize here that HtpB recruits a protein(s) from eukaryotic cells that is involved in the emergence of the aforementioned phenotypes. To identify this protein, a commercially available HeLa cDNA library was screened using a yeast two-hybrid system. Approximately 5×10(6) yeast clones carrying HeLa cDNA library plasmid were screened. Twenty-one positive clones were identified. DNA sequence analysis revealed that all of these positive clones encoded the mammalian small heat shock protein Hsp10. Based on the fact that chaperonions are required to interact with co-chaperonins to function properly in protein folding, we believe that HtpB recruits the host cell Hsp10 to appropriately interact with SAMDC and to induce the multifunction phenotypes deemed important in L. pneumophila pathogenesis.

  8. Systematic two-hybrid and comparative proteomic analyses reveal novel yeast pre-mRNA splicing factors connected to Prp19.

    Directory of Open Access Journals (Sweden)

    Liping Ren

    Full Text Available Prp19 is the founding member of the NineTeen Complex, or NTC, which is a spliceosomal subcomplex essential for spliceosome activation. To define Prp19 connectivity and dynamic protein interactions within the spliceosome, we systematically queried the Saccharomyces cerevisiae proteome for Prp19 WD40 domain interaction partners by two-hybrid analysis. We report that in addition to S. cerevisiae Cwc2, the splicing factor Prp17 binds directly to the Prp19 WD40 domain in a 1:1 ratio. Prp17 binds simultaneously with Cwc2 indicating that it is part of the core NTC complex. We also find that the previously uncharacterized protein Urn1 (Dre4 in Schizosaccharomyces pombe directly interacts with Prp19, and that Dre4 is conditionally required for pre-mRNA splicing in S. pombe. S. pombe Dre4 and S. cerevisiae Urn1 co-purify U2, U5, and U6 snRNAs and multiple splicing factors, and dre4Δ and urn1Δ strains display numerous negative genetic interactions with known splicing mutants. The S. pombe Prp19-containing Dre4 complex co-purifies three previously uncharacterized proteins that participate in pre-mRNA splicing, likely before spliceosome activation. Our multi-faceted approach has revealed new low abundance splicing factors connected to NTC function, provides evidence for distinct Prp19 containing complexes, and underscores the role of the Prp19 WD40 domain as a splicing scaffold.

  9. Synthesis of Carbon Nanotube-Inorganic Hybrid Nanocomposites: An Instructional Experiment in Nanomaterials Chemistry

    Science.gov (United States)

    de Dios, Miguel; Salgueirino, Veronica; Perez-Lorenzo, Moises; Correa-Duarte, Miguel A.

    2012-01-01

    An experiment is described to introduce advanced undergraduate students to an exciting area of nanotechnology that incorporates nanoparticles onto carbon nanotubes to produce systems that have valuable technological applications. The synthesis of such material has been easily achieved through a simple three-step procedure. Students explore…

  10. Synthesis of Carbon Nanotube-Inorganic Hybrid Nanocomposites: An Instructional Experiment in Nanomaterials Chemistry

    Science.gov (United States)

    de Dios, Miguel; Salgueirino, Veronica; Perez-Lorenzo, Moises; Correa-Duarte, Miguel A.

    2012-01-01

    An experiment is described to introduce advanced undergraduate students to an exciting area of nanotechnology that incorporates nanoparticles onto carbon nanotubes to produce systems that have valuable technological applications. The synthesis of such material has been easily achieved through a simple three-step procedure. Students explore…

  11. An abrupt outgassing revealed by a slow decompression experiment of cristal-bearing syrup foam

    Science.gov (United States)

    Kanno, Y.; Namiki, A.

    2013-12-01

    Distribution of volcanic gasses in a conduit determines eruption style. Outgassing changes the distribution of volcanic gasses in a conduit.We here simulated the outgassing from ascending magma by slow decompression experiments. As molten magma ascends in a conduit, surrounding pressure becomes low and bubbles in magma expand. In our previous work, we found that the bubble expansion causes film rupturing and makes paths for outgassing. The crystals in magma may affect this newly found outgassing style. Accordingly, we slowly decompressed syrup foam including solid particles as a magma analogue. Experiments are conducted in an acrylic tank. We observed the expansion of three-phase magma analog from the front of the tank using a digital video camera. From the images and pressure measurements, we calculated time evolution of the syrup volume and permeability. We consider that there is no bubble segregation by the ascent of individual bubbles from the Stoke's velocity. We conducted our experiments with a viscosity range of 10-20 Pa s which is the same orders of magnitude of that of basaltic magma, 10-103 Pa s. At the beginning of the decompression, the volume change of the syrup foam is well explained by isothermal expansion. When the gas fractions reached to the 85-90%, we observed that deformations of bubble films caused film rupturing so that bubbles coalesce vertically to clear a path. As time elapsed, the measured gas volume in the foam becomes smaller than that estimated by the isothermal expansion, indicating the occurrence of outgassing. In the experiments with high volume fraction of solid particles (>30 vol.% for bubble-free liquid), we observed another new style of outgassing. Several large voids (> 10 mm in radius) appear at a middle height of the foam and connect each other to make a horizontally elongated cavity. The roof of the cavity collapses, and then massive outgassing occurs. At the beginning of the decompression until the foam collapses, outgassing

  12. Underplating in the Himalaya-Tibet collision zone revealed by the Hi-CLIMB experiment.

    Science.gov (United States)

    Nábelek, John; Hetényi, György; Vergne, Jérôme; Sapkota, Soma; Kafle, Basant; Jiang, Mei; Su, Heping; Chen, John; Huang, Bor-Shouh

    2009-09-11

    We studied the formation of the Himalayan mountain range and the Tibetan Plateau by investigating their lithospheric structure. Using an 800-kilometer-long, densely spaced seismic array, we have constructed an image of the crust and upper mantle beneath the Himalayas and the southern Tibetan Plateau. The image reveals in a continuous fashion the Main Himalayan thrust fault as it extends from a shallow depth under Nepal to the mid-crust under southern Tibet. Indian crust can be traced to 31 degrees N. The crust/mantle interface beneath Tibet is anisotropic, indicating shearing during its formation. The dipping mantle fabric suggests that the Indian mantle is subducting in a diffuse fashion along several evolving subparallel structures.

  13. Comparative transcriptome analysis reveals carbohydrate and lipid metabolism blocks in Brassica napus L. male sterility induced by the chemical hybridization agent monosulfuron ester sodium.

    Science.gov (United States)

    Li, Zhanjie; Cheng, Yufeng; Cui, Jianmin; Zhang, Peipei; Zhao, Huixian; Hu, Shengwu

    2015-03-17

    Chemical hybridization agents (CHAs) are often used to induce male sterility for the production of hybrid seeds. We previously discovered that monosulfuron ester sodium (MES), an acetolactate synthase (ALS) inhibitor of the herbicide sulfonylurea family, can induce rapeseed (Brassica napus L.) male sterility at approximately 1% concentration required for its herbicidal activity. To find some clues to the mechanism of MES inducing male sterility, the ultrastructural cytology observations, comparative transcriptome analysis, and physiological analysis on carbohydrate content were carried out in leaves and anthers at different developmental stages between the MES-treated and mock-treated rapeseed plants. Cytological analysis revealed that the plastid ultrastructure was abnormal in pollen mother cells and tapetal cells in male sterility anthers induced by MES treatment, with less material accumulation in it. However, starch granules were observed in chloroplastids of the epidermis cells in male sterility anthers. Comparative transcriptome analysis identified 1501 differentially expressed transcripts (DETs) in leaves and anthers at different developmental stages, most of these DETs being localized in plastid and mitochondrion. Transcripts involved in metabolism, especially in carbohydrate and lipid metabolism, and cellular transport were differentially expressed. Pathway visualization showed that the tightly regulated gene network for metabolism was reprogrammed to respond to MES treatment. The results of cytological observation and transcriptome analysis in the MES-treated rapeseed plants were mirrored by carbohydrate content analysis. MES treatment led to decrease in soluble sugars content in leaves and early stage buds, but increase in soluble sugars content and decrease in starch content in middle stage buds. Our integrative results suggested that carbohydrate and lipid metabolism were influenced by CHA-MES treatment during rapeseed anther development, which might

  14. A cry from the darkness: women with severe mental illness in India reveal their experiences with sexual coercion.

    Science.gov (United States)

    Chandra, Prabha S; Deepthivarma, S; Carey, Michael P; Carey, Kate B; Shalinianant, M P

    2003-01-01

    THIS STUDY used qualitative research methods to investigate the problem of sexual coercion among female psychiatric patients in India. Consecutive female admissions (n = 146) to the inpatient unit of a psychiatric hospital in southern India were screened regarding coercive sexual experiences. Women who reported coercion (n = 50; 34%) participated in a semi-structured interview to learn more about their experiences. Among these women, 24 (48%) reported that the perpetrator was their spouse, 13 (26%) identified a friend or acquaintance, and 10 (20%) identified a relative such as an uncle or cousin. Most experiences occurred in the women's homes. Thirty of the 50 coerced women (60%) reported that they had not disclosed their experience to anyone, and that they had not sought help. Women revealed a sense of helplessness, fear, and secrecy related to their experiences. The problem of sexual coercion is seldom addressed in mental health care in India; the prevalence and severity of such experiences warrant immediate clinical attention and continued research.

  15. Travelling in time with networks: Revealing present day hybridization versus ancestral polymorphism between two species of brown algae, Fucus vesiculosus and F. spiralis

    Directory of Open Access Journals (Sweden)

    Pearson Gareth A

    2011-01-01

    Full Text Available Abstract Background Hybridization or divergence between sympatric sister species provides a natural laboratory to study speciation processes. The shared polymorphism in sister species may either be ancestral or derive from hybridization, and the accuracy of analytic methods used thus far to derive convincing evidence for the occurrence of present day hybridization is largely debated. Results Here we propose the application of network analysis to test for the occurrence of present day hybridization between the two species of brown algae Fucus spiralis and F. vesiculosus. Individual-centered networks were analyzed on the basis of microsatellite genotypes from North Africa to the Pacific American coast, through the North Atlantic. Two genetic distances integrating different time steps were used, the Rozenfeld (RD; based on alleles divergence and the Shared Allele (SAD; based on alleles identity distances. A diagnostic level of genotype divergence and clustering of individuals from each species was obtained through RD while screening for exchanges through putative hybridization was facilitated using SAD. Intermediate individuals linking both clusters on the RD network were those sampled at the limits of the sympatric zone in Northwest Iberia. Conclusion These results suggesting rare hybridization were confirmed by simulation of hybrids and F2 with directed backcrosses. Comparison with the Bayesian method STRUCTURE confirmed the usefulness of both approaches and emphasized the reliability of network analysis to unravel and study hybridization

  16. Travelling in time with networks: Revealing present day hybridization versus ancestral polymorphism between two species of brown algae, Fucus vesiculosus and F. spiralis.

    Science.gov (United States)

    Moalic, Yann; Arnaud-Haond, Sophie; Perrin, Cécile; Pearson, Gareth A; Serrao, Ester A

    2011-01-31

    Hybridization or divergence between sympatric sister species provides a natural laboratory to study speciation processes. The shared polymorphism in sister species may either be ancestral or derive from hybridization, and the accuracy of analytic methods used thus far to derive convincing evidence for the occurrence of present day hybridization is largely debated. Here we propose the application of network analysis to test for the occurrence of present day hybridization between the two species of brown algae Fucus spiralis and F. vesiculosus. Individual-centered networks were analyzed on the basis of microsatellite genotypes from North Africa to the Pacific American coast, through the North Atlantic. Two genetic distances integrating different time steps were used, the Rozenfeld (RD; based on alleles divergence) and the Shared Allele (SAD; based on alleles identity) distances. A diagnostic level of genotype divergence and clustering of individuals from each species was obtained through RD while screening for exchanges through putative hybridization was facilitated using SAD. Intermediate individuals linking both clusters on the RD network were those sampled at the limits of the sympatric zone in Northwest Iberia. These results suggesting rare hybridization were confirmed by simulation of hybrids and F2 with directed backcrosses. Comparison with the Bayesian method STRUCTURE confirmed the usefulness of both approaches and emphasized the reliability of network analysis to unravel and study hybridization.

  17. Focus Groups Reveal Differences in Career Experiences Between Male and Female Geoscientists

    Science.gov (United States)

    Oconnell, S.; Frey, C. D.; Holmes, M.

    2003-12-01

    We conducted twelve telephone focus groups of geoscientists to discover what motivates geoscientists to enter our field and stay in our field. There were separate male and female groups from six different professional categories: administrators, full and associate professors, non-tenure track personnel, assistant professors, post-docs and PhD candidates, Bachelor's and Master's candidates. A total of 96 geoscientists participated. Specifically, respondents were asked what initially brought them into the geosciences. Three dominant themes emerged: the subject matter itself, undergraduate experiences, and relationships. A total of 51 responses to this question related to the subject matter itself. Approximately 61 percent (31) of those responses were given by male focus group participants. Across all focus groups, participants brought up issues such as a general appreciation of the outdoors, weather, rocks, and dinosaurs. Following closely behind the general subject matter is undergraduate events. Fifty-one responses mentioned something about undergraduate experiences such as an introductory class, a laboratory experience, or field experiences. While both female and male participants discussed the role of interpersonal relationships in their decision to become a geoscientist, females were slightly more likely to bring up relevant relationships (26 times for females compared to 21 for males). These relationships varied in both groups from a parent or grandparents influence to camping trips with professors. When respondents were asked whether they had ever considered leaving the geosciences and under what circumstances, there was a striking difference between males and females: males were far less likely to have ever considered leaving. Younger males were more likely to consider leaving than older geoscientists. They feel challenged by the financial constraints of graduate school and the time constraints of academic vs. family life. Many females considered leaving at

  18. Autonomy and Non-autonomy of Angiogenic Cell Movements Revealed by Experiment-Driven Mathematical Modeling

    Directory of Open Access Journals (Sweden)

    Kei Sugihara

    2015-12-01

    Full Text Available Angiogenesis is a multicellular phenomenon driven by morphogenetic cell movements. We recently reported morphogenetic vascular endothelial cell (EC behaviors to be dynamic and complex. However, the principal mechanisms orchestrating individual EC movements in angiogenic morphogenesis remain largely unknown. Here we present an experiment-driven mathematical model that enables us to systematically dissect cellular mechanisms in branch elongation. We found that cell-autonomous and coordinated actions governed these multicellular behaviors, and a cell-autonomous process sufficiently illustrated essential features of the morphogenetic EC dynamics at both the single-cell and cell-population levels. Through refining our model and experimental verification, we further identified a coordinated mode of tip EC behaviors regulated via a spatial relationship between tip and follower ECs, which facilitates the forward motility of tip ECs. These findings provide insights that enhance our mechanistic understanding of not only angiogenic morphogenesis, but also other types of multicellular phenomenon.

  19. An economic experiment reveals that humans prefer pool punishment to maintain the commons.

    Science.gov (United States)

    Traulsen, Arne; Röhl, Torsten; Milinski, Manfred

    2012-09-22

    Punishment can stabilize costly cooperation and ensure the success of a common project that is threatened by free-riders. Punishment mechanisms can be classified into pool punishment, where the punishment act is carried out by a paid third party, (e.g. a police system or a sheriff), and peer punishment, where the punishment act is carried out by peers. Which punishment mechanism is preferred when both are concurrently available within a society? In an economic experiment, we show that the majority of subjects choose pool punishment, despite being costly even in the absence of defectors, when second-order free-riders, cooperators that do not punish, are also punished. Pool punishers are mutually enforcing their support for the punishment organization, stably trapping each other. Our experimental results show how organized punishment could have displaced individual punishment in human societies.

  20. Nature of the band gap and origin of the conductivity of PbO2 revealed by theory and experiment.

    Science.gov (United States)

    Scanlon, David O; Kehoe, Aoife B; Watson, Graeme W; Jones, Martin O; David, William I F; Payne, David J; Egdell, Russell G; Edwards, Peter P; Walsh, Aron

    2011-12-09

    Lead dioxide has been used for over a century in the lead-acid battery. Many fundamental questions concerning PbO2 remain unanswered, principally: (i) is the bulk material a metal or a semiconductor, and (ii) what is the source of the high levels of conductivity? We calculate the electronic structure and defect physics of PbO2, using a hybrid density functional, and show that it is an n-type semiconductor with a small indirect band gap of ∼0.2  eV. The origin of electron carriers in the undoped material is found to be oxygen vacancies, which forms a donor state resonant in the conduction band. A dipole-forbidden band gap combined with a large carrier induced Moss-Burstein shift results in a large effective optical band gap. The model is supported by neutron diffraction, which reveals that the oxygen sublattice is only 98.4% occupied, thus confirming oxygen substoichiometry as the electron source.

  1. At the European Hybrid Spectrometer (EHS) for the experiment NA27

    CERN Multimedia

    1983-01-01

    The experiment NA27 was intended to measure accurately the lifetime of Charm particles and to study their hadronic production and decay particles. The vertex detector was the hydrogen bubble chamber LEBC. The aim was to collect several hundreths of fully reconstructed D0 and D+-, and several tens of F+- and Lambda_c decays as produced by 360 GeV/c negative pions and 400 GeV/c protons. The photo gives a side view of a section of the spectrometer, with a 12 m long gas Cerenkov counter at the centre. The spectrometer axis enters the photo at bottom, left corner. See photo 8311661, 8311662X, 8311660X.

  2. A tale of two sections: an experiment to compare the effectiveness of a hybrid versus a traditional lecture format in introductory microbiology.

    Science.gov (United States)

    Adams, Alison E M; Randall, Shelby; Traustadóttir, Tinna

    2015-03-01

    Two sections of an introductory microbiology course were taught by one instructor. One was taught through a hybrid format and the other through a traditional format. Students were randomly assigned to the two sections. Both sections were provided with identical lecture materials, in-class worksheets, in-class assessments, and extra credit opportunities; the main difference was in the way the lecture material was delivered-online for the hybrid section and in person for the traditional section. Analysis of final grades revealed that students in the traditional section did significantly better than those in the hybrid section (plecture notes and/or use the audio component of the online lectures, suggesting minimal interaction with the lecture material for these students.

  3. Experience-dependent hemispheric specialization of letters and numbers is revealed in early visual processing.

    Science.gov (United States)

    Park, Joonkoo; Chiang, Crystal; Brannon, Elizabeth M; Woldorff, Marty G

    2014-10-01

    Recent fMRI research has demonstrated that letters and numbers are preferentially processed in distinct regions and hemispheres in the visual cortex. In particular, the left visual cortex preferentially processes letters compared with numbers, whereas the right visual cortex preferentially processes numbers compared with letters. Because letters and numbers are cultural inventions and are otherwise physically arbitrary, such a double dissociation is strong evidence for experiential effects on neural architecture. Here, we use the high temporal resolution of ERPs to investigate the temporal dynamics of the neural dissociation between letters and numbers. We show that the divergence between ERP traces to letters and numbers emerges very early in processing. Letters evoked greater N1 waves (latencies 140-170 msec) than did numbers over left occipital channels, whereas numbers evoked greater N1s than letters over the right, suggesting letters and numbers are preferentially processed in opposite hemispheres early in visual encoding. Moreover, strings of letters, but not single letters, elicited greater P2 ERP waves (starting around 250 msec) than numbers did over the left hemisphere, suggesting that the visual cortex is tuned to selectively process combinations of letters, but not numbers, further along in the visual processing stream. Additionally, the processing of both of these culturally defined stimulus types differentiated from similar but unfamiliar visual stimulus forms (false fonts) even earlier in the processing stream (the P1 at 100 msec). These findings imply major cortical specialization processes within the visual system driven by experience with reading and mathematics.

  4. Analysis of Biostimulated Microbial Communities from Two Field Experiments Reveals Temporal and Spatial Differences in Proteome Profiles

    Energy Technology Data Exchange (ETDEWEB)

    Callister, Stephen J.; Wilkins, Michael J.; Nicora, Carrie D.; Williams, Kenneth H.; Banfield, Jillian F.; VerBerkmoes, Nathan; Hettich, Robert L.; N' Guessan, A. Lucie; Mouser, Paula; Elifantz, H.; Smith, Richard D.; Lovley, Derek R.; Lipton, Mary S.; Long, Philip E.

    2010-12-01

    Stimulated by acetate-amendment field experiments conducted in 2007 and 2008, anaerobic microbial populations in the aquifer at the Rifle Integrated Field Research Challenge site in Colorado reduced mobile U(VI) to insoluble U(IV). During this period, planktonic biomass was sampled at various time points and used to quantitatively evaluate proteomes, both spatially and temporally to study the dynamics of the microbial community proteome dynamics in relationship to geochemical measurements. As there were no comprehensive genome sequence data available at the time, we systematically evaluated different organisms to generate a "pseudo-metagenome" for proteomics analyses. Proteomics results supported the dominance of Geobacteraceae during biostimulation and revealed a shift from iron reduction to sulfate reduction, evidenced by changes in community membership. Because U(VI) is reduced at a lower rate during sulfate reduction, detecting this shift is important to maintaining the maximum rate of U(VI) reduction. In addition, the comparison of proteome measurements made at the end of the 2007 field experiment to the 2008 field experiment revealed a modified community structure. Importantly, the failure of a community to rebound following the cessation of biostimulation needs to be included in long-term remediation strategies.

  5. Microsatellite analyses of artificial and spontaneous dogrose hybrids reveal the hybridogenic origin of Rosa micrantha by the contribution of unreduced gametes.

    Science.gov (United States)

    Ritz, Christiane M; Wissemann, Volker

    2011-01-01

    Dogroses are characterized by a unique meiosis system, the so-called canina meiosis, which facilitates sexual reproduction at odd-number ploidy. The mostly pentaploid somatic level of dogroses is restored by a merger of haploid sperm cells and tetraploid egg cells. We analyzed experimental hybrids between different dogrose species using microsatellites to determine pollen-transmitted alleles. This information was used to reconstruct the putative hybridogenic origin of Rosa micrantha and R. dumalis and to estimate the frequency of spontaneous hybridization in a natural population. We found no evidence for the hybrid origin of R. dumalis, but our data suggest that R. micrantha presumably arose by hybridization between R. rubiginosa and R. canina or R. corymbifera. We observed only hexaploid individuals of R. micrantha, thus the establishment of this hybridogenic species was favored when unreduced gametes contributed to their origin. We demonstrate that spontaneous hybrids originated infrequently from the parental species in a natural population, but hybridization was often associated with the formation of unreduced gametes. We postulate that unreduced gametes play a major role in the evolutionary success of dogrose hybrids because they provide highly homologous chromosomes crucial for bivalent formation during canina meiosis and thus ensuring this unique form of sexual reproduction.

  6. Evidence of Natural Hybridization and Introgression between Vasconcellea Species (Caricaceae) from Southern Ecuador Revealed by Chloroplast, Mitochondrial and Nuclear DNA Markers

    Science.gov (United States)

    VAN DROOGENBROECK, B.; KYNDT, T.; ROMEIJN-PEETERS, E.; VAN THUYNE, W.; GOETGHEBEUR, P.; ROMERO-MOTOCHI, J. P.; GHEYSEN, G.

    2006-01-01

    • Background and Aims Vasconcellea × heilbornii is believed to be of natural hybrid origin between V. cundinamarcensis and V. stipulata, and is often difficult to discriminate from V. stipulata on morphological grounds. The aim of this paper is to examine individuals of these three taxa and of individuals from the closely related species V. parviflora and V. weberbaueri, which all inhabit a hybrid zone in southern Ecuador. • Methods Molecular data from mitochondrial, chloroplast and nuclear DNA from 61 individuals were analysed. • Key Results Molecular analysis confirmed occasional contemporary hybridization between V. stipulata, V. cundinamarcensis and V. × heilbornii and suggested the possible involvement of V. weberbaueri in the origin of V. × heilbornii. In addition, the molecular data indicated unidirectional introgression of the V. cundinamarcensis nuclear genome into that of V. stipulata. Several of the individuals examined with morphology similar to that of V. stipulata had genetic traces of hybridization with V. cundinamarcensis, which only seems to act as pollen donor in interspecific hybridization events. Molecular analyses also strongly suggested that most of the V. × heilbornii individuals are not F1 hybrids but instead are progeny of repeated backcrosses with V. stipulata. • Conclusions The results of the present study point to the need for re-evaluation of natural populations of V. stipulata and V. × heilbornii. In general, this analysis demonstrates the complex patterns of genetic and morphological diversity found in natural plant hybrid zones. PMID:16500954

  7. Hybrid Simulations and Scaling Laws for Shock Formation in the UCLA Collisionless Shock Experiment

    Science.gov (United States)

    Larson, David; Winske, Dan; Cowee, Misa; Clark, S. Eric; Niemann, Christoph; Brecht, Stephen

    2015-11-01

    Two- and three-dimensional simulations are used to compare and contrast the plasma expansion, formation of a magnetic cavity, and generation of an outgoing shock wave for conditions relevant to the laser experiment at UCLA, as a function of the background ion mass. A model of the shock formation process is constructed that yields an expression for the speed of the shock, which we show is in good agreement with the simulations. In addition, the criteria for generating strongly-coupled shocks are derived and simulations are used to examine the velocity scaling obtained via momentum conservation. This work was performed under the auspices of the U.S. Department of Energy by Lawrence Livermore National Laboratory under Contract DE-AC52-07NA27344 and supported by DTRA10027-6759.

  8. Intraply Hybrid Composite Design

    Science.gov (United States)

    Chamis, C. C.; Sinclair, J. H.

    1986-01-01

    Several theoretical approaches combined in program. Intraply hybrid composites investigated theoretically and experimentally at Lewis Research Center. Theories developed during investigations and corroborated by attendant experiments used to develop computer program identified as INHYD (Intraply Hybrid Composite Design). INHYD includes several composites micromechanics theories, intraply hybrid composite theories, and integrated hygrothermomechanical theory. Equations from theories used by program as appropriate for user's specific applications.

  9. Array-based comparative genomic hybridization analysis reveals chromosomal copy number aberrations associated with clinical outcome in canine diffuse large B-cell lymphoma.

    Directory of Open Access Journals (Sweden)

    Arianna Aricò

    Full Text Available Canine Diffuse Large B-cell Lymphoma (cDLBCL is an aggressive cancer with variable clinical response. Despite recent attempts by gene expression profiling to identify the dog as a potential animal model for human DLBCL, this tumor remains biologically heterogeneous with no prognostic biomarkers to predict prognosis. The aim of this work was to identify copy number aberrations (CNAs by high-resolution array comparative genomic hybridization (aCGH in 12 dogs with newly diagnosed DLBCL. In a subset of these dogs, the genetic profiles at the end of therapy and at relapse were also assessed. In primary DLBCLs, 90 different genomic imbalances were counted, consisting of 46 gains and 44 losses. Two gains in chr13 were significantly correlated with clinical stage. In addition, specific regions of gains and losses were significantly associated to duration of remission. In primary DLBCLs, individual variability was found, however 14 recurrent CNAs (>30% were identified. Losses involving IGK, IGL and IGH were always found, and gains along the length of chr13 and chr31 were often observed (>41%. In these segments, MYC, LDHB, HSF1, KIT and PDGFRα are annotated. At the end of therapy, dogs in remission showed four new CNAs, whereas three new CNAs were observed in dogs at relapse compared with the previous profiles. One ex novo CNA, involving TCR, was present in dogs in remission after therapy, possibly induced by the autologous vaccine. Overall, aCGH identified small CNAs associated with outcome, which, along with future expression studies, may reveal target genes relevant to cDLBCL.

  10. Genomic profiling of plasmablastic lymphoma using array comparative genomic hybridization (aCGH: revealing significant overlapping genomic lesions with diffuse large B-cell lymphoma

    Directory of Open Access Journals (Sweden)

    Lu Xin-Yan

    2009-11-01

    Full Text Available Abstract Background Plasmablastic lymphoma (PL is a subtype of diffuse large B-cell lymphoma (DLBCL. Studies have suggested that tumors with PL morphology represent a group of neoplasms with clinopathologic characteristics corresponding to different entities including extramedullary plasmablastic tumors associated with plasma cell myeloma (PCM. The goal of the current study was to evaluate the genetic similarities and differences among PL, DLBCL (AIDS-related and non AIDS-related and PCM using array-based comparative genomic hybridization. Results Examination of genomic data in PL revealed that the most frequent segmental gain (> 40% include: 1p36.11-1p36.33, 1p34.1-1p36.13, 1q21.1-1q23.1, 7q11.2-7q11.23, 11q12-11q13.2 and 22q12.2-22q13.3. This correlated with segmental gains occurring in high frequency in DLBCL (AIDS-related and non AIDS-related cases. There were some segmental gains and some segmental loss that occurred in PL but not in the other types of lymphoma suggesting that these foci may contain genes responsible for the differentiation of this lymphoma. Additionally, some segmental gains and some segmental loss occurred only in PL and AIDS associated DLBCL suggesting that these foci may be associated with HIV infection. Furthermore, some segmental gains and some segmental loss occurred only in PL and PCM suggesting that these lesions may be related to plasmacytic differentiation. Conclusion To the best of our knowledge, the current study represents the first genomic exploration of PL. The genomic aberration pattern of PL appears to be more similar to that of DLBCL (AIDS-related or non AIDS-related than to PCM. Our findings suggest that PL may remain best classified as a subtype of DLBCL at least at the genome level.

  11. Exploring learning content and knowledge transfer in baccalaureate nursing students using a hybrid mental health practice experience.

    Science.gov (United States)

    Booth, Richard G; Scerbo, Christina Ko; Sinclair, Barbara; Hancock, Michele; Reid, David; Denomy, Eileen

    2017-04-01

    Little research has been completed exploring knowledge development and transfer from and between simulated and clinical practice settings in nurse education. This study sought to explore the content learned, and the knowledge transferred, in a hybrid mental health clinical course consisting of simulated and clinical setting experiences. A qualitative, interpretive descriptive study design. Clinical practice consisted of six 10-hour shifts in a clinical setting combined with six two-hour simulations. 12 baccalaureate nursing students enrolled in a compressed time frame program at a large, urban, Canadian university participated. Document analysis and a focus group were used to draw thematic representations of content and knowledge transfer between clinical environments (i.e., simulated and clinical settings) using the constant comparative data analysis technique. Four major themes arose: (a) professional nursing behaviors; (b) understanding of the mental health nursing role; (c) confidence gained in interview skills; and, (d) unexpected learning. Nurse educators should further explore the intermingling of simulation and clinical practice in terms of knowledge development and transfer with the goal of preparing students to function within the mental health nursing specialty. Copyright © 2017 Elsevier Ltd. All rights reserved.

  12. Revealing the synergetic effects in Ni nanoparticle-carbon nanotube hybrids by scanning transmission X-ray microscopy and their application in the hydrolysis of ammonia borane

    Science.gov (United States)

    Zhao, Guanqi; Zhong, Jun; Wang, Jian; Sham, Tsun-Kong; Sun, Xuhui; Lee, Shuit-Tong

    2015-05-01

    The hybrids of carbon nanotubes (CNTs) and the supported Ni nanoparticles (NPs) have been studied by scanning transmission X-ray microscopy (STXM) and tested by the hydrolysis reaction of ammonia borane (AB, NH3BH3). Data clearly showed the existence of a strong interaction between Ni NPs and thin CNTs (C-O-Ni bonds), which favored the tunable (buffer) electronic structure of Ni NPs facilitating the catalytic process. The hydrolysis process of AB confirmed the hypothesis that the hybrids with a strong interfacial interaction would show superior catalytic performance, while the hybrids with a weak interfacial interaction show poor performance. Our results provide a wealth of detailed information regarding the electronic structure of the NP-CNT hybrids and provide guidance towards the rational design of high-performance catalysts for energy applications.The hybrids of carbon nanotubes (CNTs) and the supported Ni nanoparticles (NPs) have been studied by scanning transmission X-ray microscopy (STXM) and tested by the hydrolysis reaction of ammonia borane (AB, NH3BH3). Data clearly showed the existence of a strong interaction between Ni NPs and thin CNTs (C-O-Ni bonds), which favored the tunable (buffer) electronic structure of Ni NPs facilitating the catalytic process. The hydrolysis process of AB confirmed the hypothesis that the hybrids with a strong interfacial interaction would show superior catalytic performance, while the hybrids with a weak interfacial interaction show poor performance. Our results provide a wealth of detailed information regarding the electronic structure of the NP-CNT hybrids and provide guidance towards the rational design of high-performance catalysts for energy applications. Electronic supplementary information (ESI) available: Magnified TEM images, high resolution TEM images and the particle size distributions of the samples, the STXM results of a thick tube at different positions, XPS results, stability test. See DOI: 10.1039/c5nr01168j

  13. Comparative transcriptome analysis reveals carbohydrate and lipid metabolism blocks in Brassica napus L. male sterility induced by the chemical hybridization agent monosulfuron ester sodium

    OpenAIRE

    Li, Zhanjie; Cheng, Yufeng; Cui, Jianmin; Zhang, Peipei; Zhao, Huixian; Hu, Shengwu

    2015-01-01

    Background Chemical hybridization agents (CHAs) are often used to induce male sterility for the production of hybrid seeds. We previously discovered that monosulfuron ester sodium (MES), an acetolactate synthase (ALS) inhibitor of the herbicide sulfonylurea family, can induce rapeseed (Brassica napus L.) male sterility at approximately 1% concentration required for its herbicidal activity. To find some clues to the mechanism of MES inducing male sterility, the ultrastructural cytology observa...

  14. 综合果蝇杂交实验的构建与实践%Construction and Practice of Comprehensive Hybrid Experiment of Drosophila Melanogaster

    Institute of Scientific and Technical Information of China (English)

    马沛勤; 苏仙绒; 陈莉

    2015-01-01

    Using drosophila melanogaster as hybrid experiment parents, the independent hybridization of drosophila melanogaster of genetic experiments were transformed into a comprehensive hybridization experiment, and combined with transgenic fly lines( eyeless-GAL4) , hybrid experiments of UAS-Ras v12 and the analysis of genetic drift conditions, the verification experiments were changed into design, verification and exploration experiments.Which can help to enhance students’analysis ability, research ability, innovation ability, independent problem solving skills and knowledge application skills.%以黑腹果蝇品系:短翅、焦刚毛、白眼、灰体果蝇和长翅、直刚毛、红眼、黑檀体果蝇为杂交实验亲本,通过实验设计,将遗传学实验中各个验证遗传规律的独立果蝇杂交实验合成一个综合果蝇杂交实验,并与转基因果蝇品系eyeless-GAL4和UAS-Ras v12的杂交实验以及分析遗传漂变条件相结合,变原验证型实验为设计型+验证型+探索型实验,有利于培养学生的分析能力、探究能力、创新能力、独立解决问题能力、应用知识能力。

  15. The Immersive Virtual Reality Experience: A Typology of Users Revealed Through Multiple Correspondence Analysis Combined with Cluster Analysis Technique.

    Science.gov (United States)

    Rosa, Pedro J; Morais, Diogo; Gamito, Pedro; Oliveira, Jorge; Saraiva, Tomaz

    2016-03-01

    Immersive virtual reality is thought to be advantageous by leading to higher levels of presence. However, and despite users getting actively involved in immersive three-dimensional virtual environments that incorporate sound and motion, there are individual factors, such as age, video game knowledge, and the predisposition to immersion, that may be associated with the quality of virtual reality experience. Moreover, one particular concern for users engaged in immersive virtual reality environments (VREs) is the possibility of side effects, such as cybersickness. The literature suggests that at least 60% of virtual reality users report having felt symptoms of cybersickness, which reduces the quality of the virtual reality experience. The aim of this study was thus to profile the right user to be involved in a VRE through head-mounted display. To examine which user characteristics are associated with the most effective virtual reality experience (lower cybersickness), a multiple correspondence analysis combined with cluster analysis technique was performed. Results revealed three distinct profiles, showing that the PC gamer profile is more associated with higher levels of virtual reality effectiveness, that is, higher predisposition to be immersed and reduced cybersickness symptoms in the VRE than console gamer and nongamer. These findings can be a useful orientation in clinical practice and future research as they help identify which users are more predisposed to benefit from immersive VREs.

  16. DNA barcoding reveals a new record of Potamogeton distinctus (Potamogetonaceae and its natural hybrids, P. distinctus × P. nodosus and P. distinctus × P. wrightii (P. ×malainoides from Myanmar

    Directory of Open Access Journals (Sweden)

    Yu Ito

    2014-02-01

    Full Text Available Indo-China floristic region is among the 34 richest floristic regions of the world, and its plant diversity is still under investigation. Here we report a new record of an aquatic plant, Potamogeton distinctus, from Myanmar, a part of the region, that is detected by means of DNA barcoding method. The molecular method further identified the other specimens as hybrids of Potamogeton: one is P. ×malainoides (P. distinctus × P. wrightii, and the other is P. distinctus × P. nodosus. The first of these was thus far genetically confirmed in China, but the parental combination of the hybrid in Myanmar was reciprocal to those reported from China. The second hybrid was also recorded from China, but the maternal lineage was revealed for the first time, in this case it was P. distinctus. The present study showed that 1 nrITS is useful to distinguish closely related Potamogeton species as well as hybrids among them and 2 atpB-rbcL has higher utility than other frequently used plastid DNA markers. We thus propose nrITS and atpB-rbcL as DNA barcoding markers for future Potamogeton studies.

  17. Recent introgressive hybridization revealed by exclusive mtDNA transfer from Oreochromis leucostictus (Trewavas, 1933) to Oreochromis niloticus (Linnaeus, 1758) in Lake Baringo, Kenya

    OpenAIRE

    Nyingi, Dorothy W.; Agnèse, Jean-François

    2007-01-01

    Nuclear DNA and mtDNA polymorphisms were surveyed in various species of East African Oreochromis. In Lake Baringo, where only Oreochromis niloticus baringoensis is present, alien mtDNA haplotypes were observed, apparently the result of introgressive hybridization with Oreochromis leucostictus. This introgression is not accompanied by any substantial or recorded transfer of nuclear genes into O. n. baringoensis.

  18. Characterization of a Solid Oxide Fuel Cell Gas Turbine Hybrid System Based on a Factorial Design of Experiments Using Hardware Simulation

    Energy Technology Data Exchange (ETDEWEB)

    Restrepo, Bernardo; Banta, Larry E; Tucker, David

    2012-10-01

    A full factorial experimental design and a replicated fractional factorial design were carried out using the Hybrid Performance (HyPer) project facility installed at the National Energy Technology Laboratory (NETL), U.S. Department of Energy to simulate gasifer/fuel cell/turbine hybrid power systems. The HyPer facility uses hardware in the loop (HIL) technology that couples a modified recuperated gas turbine cycle with hardware driven by a solid oxide fuel cell model. A 34 full factorial design (FFD) was selected to study the effects of four factors: cold-air, hot-air, bleed-air bypass valves, and the electric load on different parameters such as cathode and turbine inlet temperatures, pressure and mass flow. The results obtained, compared with former results where the experiments were made using one-factor-at-a-time (OFAT), show that no strong interactions between the factors are present in the different parameters of the system. This work also presents a fractional factorial design (ffd) 34-2 in order to analyze replication of the experiments. In addition, a new envelope is described based on the results of the design of experiments (DoE), compared with OFAT experiments, and analyzed in an off-design integrated fuel cell/gas turbine framework. This paper describes the methodology, strategy, and results of these experiments that bring new knowledge concerning the operating state space for this kind of power generation system.

  19. Dominant microbial composition and its vertical distribution in saline meromictic Lake Kaiike (Japan) as revealed by quantitative oligonucleotide probe membrane hybridization.

    Science.gov (United States)

    Koizumi, Yoshikazu; Kojima, Hisaya; Fukui, Manabu

    2004-08-01

    Vertical distributions of dominant bacterial populations in saline meromictic Lake Kaiike were investigated throughout the water column and sediment by quantitative oligonucleotide probe membrane hybridization. Three oligonucleotide probes specific for the small-subunit (SSU) rRNA of three groups of Chlorobiaceae were newly designed. In addition, three general domain (Bacteria, Archaea, and Eukarya)-specific probes, two delta-Proteobacteria-specific probes, a Chlorobiaceae-specific probe, and a Chloroflexi-specific probe were used after optimization of their washing conditions. The abundance of the sum of SSU rRNAs hybridizing with probes specific for three groups of Chlorobiaceae relative to total SSU rRNA peaked in the chemocline, accounting for up to 68%. The abundance of the delta-proteobacterial SSU rRNA relative to total SSU rRNA rapidly increased just below the chemocline up to 29% in anoxic water and peaked at the 2- to 3-cm sediment depth at ca. 34%. The abundance of SSU rRNAs hybridizing with the probe specific for the phylum Chloroflexi relative to total SSU rRNA was highest (31 to 54%) in the top of the sediment but then steeply declined with depth and became stable at 11 to 19%, indicating the robust coexistence of sulfate-reducing bacteria and Chloroflexi in the top of the sediment. Any SSU rRNA of Chloroflexi in the water column was under the detection limit. The summation of the signals of group-specific probes used in this study accounted for up to 89% of total SSU rRNA, suggesting that the DGGE-oligonucleotide probe hybridization approach, in contrast to conventional culture-dependent approaches, was very effective in covering dominant populations.

  20. Dominant Microbial Composition and Its Vertical Distribution in Saline Meromictic Lake Kaiike (Japan) as Revealed by Quantitative Oligonucleotide Probe Membrane Hybridization

    OpenAIRE

    Koizumi, Yoshikazu; Kojima, Hisaya; Fukui, Manabu

    2004-01-01

    Vertical distributions of dominant bacterial populations in saline meromictic Lake Kaiike were investigated throughout the water column and sediment by quantitative oligonucleotide probe membrane hybridization. Three oligonucleotide probes specific for the small-subunit (SSU) rRNA of three groups of Chlorobiaceae were newly designed. In addition, three general domain (Bacteria, Archaea, and Eukarya)-specific probes, two δ-Proteobacteria-specific probes, a Chlorobiaceae-specific probe, and a C...

  1. A combined RT-PCR and dot-blot hybridization method reveals the coexistence of SJNNV and RGNNV betanodavirus genotypes in wild meagre (Argyrosomus regius).

    Science.gov (United States)

    Lopez-Jimena, B; Cherif, N; Garcia-Rosado, E; Infante, C; Cano, I; Castro, D; Hammami, S; Borrego, J J; Alonso, M C

    2010-10-01

    To detect the possible coexistence of striped jack nervous necrosis virus (SJNNV) and red-spotted grouper nervous necrosis virus (RGNNV) genotypes in a single fish, a methodology based on the combination of PCR amplification and blot hybridization has been developed and applied in this study. The degenerate primers designed for the PCR procedure target the T4 region within the capsid gene, resulting in the amplification of both genotypes. The subsequent hybridization of these amplification products with two different specific digoxigenin-labelled probes resulted in the identification of both genotypes separately. The application of the RT-PCR protocol to analyse blood samples from asymptomatic wild meagre (Argyrosomus regius) specimens has shown a 46.87% of viral nervous necrosis virus carriers. The combination of RT-PCR and blot hybridization increases the detection rate up to 90.62%, and, in addition, it has shown the coexistence of both genotypes in 18 out of the 32 specimens analysed (56.25%). This study reports the coexistence of betanodaviruses belonging to two different genotypes (SJNNV and RGNNV) in wild fish specimens. This is the first report demonstrating the presence of SJNNV and RGNNV genotypes in the same specimen. This study also demonstrates a carrier state in this fish species for the first time. © 2010 The Authors. Journal compilation © 2010 The Society for Applied Microbiology.

  2. Genetic Relationships Among Five Basic Genomes St, E, A, B and D in Triticeae Revealed by Genomic Southern and in situ Hybridization

    Institute of Scientific and Technical Information of China (English)

    2007-01-01

    The St and E are two important basic genomes in the perennial tribe Triticeae (Poaceae). They exist in many perennial species and are very closely related to the A, B and D genomes of bread wheat (Triticum aestivum L.). Genomic Southern hybridization and genomic in situ hybridization (GISH) were used to analyze the genomic relationships between the two genomes (St and E) and the three basic genomes (A, B and D) of T. aestivum. The semi-quantitative analysis of the Southern hybridization suggested that both St and E genomes are most closely related to the D genome, then the A genome, and relatively distant to the B genome. GISH analysis using St and E genomic DNA as probes further confirmed the conclusion.St and E are the two basic genomes of Thinopyrum ponticum (StStEeEbEx) and Th. intermedium (StEeEb), two perennial species successfully used in wheat improvement. Therefore, this paper provides a possible answer as to why most of the spontaneous wheat- Thinopyrum translocations and substitutions usually happen in the D genome, some in the A genome and rarely in the B genome. This would develop further use of alien species for wheat improvement, especially those containing St or E in their genome components.

  3. Hybrid Placemaking in the Library: Designing Digital Technology to Enhance Users' On-Site Experience

    Science.gov (United States)

    Bilandzic, Mark; Johnson, Daniel

    2013-01-01

    This paper presents research findings and design strategies that illustrate how digital technology can be applied as a tool for "hybrid" placemaking in ways that would not be possible in purely digital or physical spaces. Digital technology has revolutionised the way people learn and gather new information. This trend has challenged the…

  4. Combination of genomic approaches with functional genetic experiments reveals two modes of repression of yeast middle-phase meiosis genes

    Science.gov (United States)

    2010-01-01

    Background Regulation of meiosis and sporulation in Saccharomyces cerevisiae is a model for a highly regulated developmental process. Meiosis middle phase transcriptional regulation is governed by two transcription factors: the activator Ndt80 and the repressor Sum1. It has been suggested that the competition between Ndt80 and Sum1 determines the temporal expression of their targets during middle meiosis. Results Using a combination of ChIP-on-chip and expression profiling, we characterized a middle phase transcriptional network and studied the relationship between Ndt80 and Sum1 during middle and late meiosis. While finding a group of genes regulated by both factors in a feed forward loop regulatory motif, our data also revealed a large group of genes regulated solely by Ndt80. Measuring the expression of all Ndt80 target genes in various genetic backgrounds (WT, sum1Δ and MK-ER-Ndt80 strains), allowed us to dissect the exact transcriptional network regulating each gene, which was frequently different than the one inferred from the binding data alone. Conclusion These results highlight the need to perform detailed genetic experiments to determine the relative contribution of interactions in transcriptional regulatory networks. PMID:20716365

  5. Molecular characterization of enterohemorrhagic Escherichia coli hemolysin gene (EHEC-hlyA)-harboring isolates from cattle reveals a diverse origin and hybrid diarrheagenic strains.

    Science.gov (United States)

    Askari Badouei, Mahdi; Morabito, Stefano; Najafifar, Arash; Mazandarani, Emad

    2016-04-01

    In the present study we investigated the occurrence of Escherichia coli strains harboring the gene encoding enterohemorrhagic E. coli hemolysin (EHEC-HlyA) in cattle and the association of this gene with various diarrheagenic E. coli (DEC) pathotypes. First, the bovine E. coli isolates were screened for EHEC-hlyA gene by PCR, and then they were characterized for the phylogenetic groups and the presence of the major virulence genes of different DEC pathotypes. In total, 25 virulence gene profiles were observed in 54 EHEC-hlyA+ isolates that reflect a considerable heterogeneity. The EHEC-hlyA+ strains were mostly associated with EHEC (72%), while only 7.4% were enteropathogenic E. coli (EPEC). We also showed the presence of estA gene of enterotoxigenic E. coli (ETEC) in 6 isolates (11.1%). Interestingly, two of the estA+ strains showed hybrid pathotypes with one carrying eae/estA (EPEC/ETEC), and the other one stx2/astA/estA (EHEC/ETEC). None of the isolates were related to enteroaggregative E. coli (EAggEC), enteroinvasive E. coli (EIEC), and necrotoxigenic E. coli (NTEC). The EHEC-plasmid encoded genes occurred in seven different combinations with EHEC-hlyA/saa/subA/espP being the most prevalent (46.3%). All stx-/eae+ strains carried O island 57 (OI-57) molecular marker(s) that may indicate these to be the progenitors of EHEC or strains losing stx. The most prevalent phylogroup was B1 (61.1%), but the most heterogeneous strains including the hybrid strains belonged to A phylogroup. Overall, our results indicate that cattle EHEC-hlyA encoding E. coli isolates consist of diverse diarrheagenic strains with the possible existence of hybrid pathotypes. Future studies are required to clarify the evolutionary aspects and clinical significance of these strains in humans and domestic animals.

  6. Hybrid plasmonic gap modes in metal film-coupled dimers and their physical origins revealed by polarization resolved dark field spectroscopy

    Science.gov (United States)

    Li, Guang-Can; Zhang, Yong-Liang; Lei, Dang Yuan

    2016-03-01

    Plasmonic gap modes sustained by metal film-coupled nanostructures have recently attracted extensive research attention due to flexible control over their spectral response and significantly enhanced field intensities at the particle-film junction. In this work, by adopting an improved dark field spectroscopy methodology - polarization resolved spectral decomposition and colour decoding - we are able to ``visualize'' and distinguish unambiguously the spectral and far field radiation properties of the complex plasmonic gap modes in metal film-coupled nanosphere monomers and dimers. Together with full-wave numerical simulation results, it is found that while the monomer-film system supports two hybridized dipole-like plasmon modes having different oscillating orientations and resonance strengths, the scattering spectrum of the dimer-film system features two additional peaks, one strong yet narrow resonant mode corresponding to a bonding dipolar moment and one hybridized higher order resonant mode, both polarized along the dimer axis. In particular, we demonstrate that the polarization dependent scattering radiation of the film-coupled nanosphere dimer can be used to optically distinguish from monomers and concurrently determine the spatial orientation of the dimer with significantly improved accuracy at the single-particle level, illustrating a simple yet highly sensitive plasmon resonance based nanometrology method.Plasmonic gap modes sustained by metal film-coupled nanostructures have recently attracted extensive research attention due to flexible control over their spectral response and significantly enhanced field intensities at the particle-film junction. In this work, by adopting an improved dark field spectroscopy methodology - polarization resolved spectral decomposition and colour decoding - we are able to ``visualize'' and distinguish unambiguously the spectral and far field radiation properties of the complex plasmonic gap modes in metal film

  7. Plasma current start-up experiments using outboard- and top-launch lower hybrid wave on the TST-2 spherical tokamak

    Science.gov (United States)

    Shinya, T.; Takase, Y.; Yajima, S.; Moeller, C.; Yamazaki, H.; Tsujii, N.; Yoshida, Y.; Ejiri, A.; Togashi, H.; Toida, K.; Furui, H.; Homma, H.; Nakamura, K.; Roidl, B.; Sonehara, M.; Takahashi, W.; Takeuchi, T.

    2017-03-01

    Non-inductive plasma current start-up experiments were performed using the lower hybrid wave (LHW) on the TST-2 spherical tokamak. The density limit, observed in previous experiments using the outboard-launch antenna, disappeared after changing the plasma condition in the scrape-off layer, and the plasma current reached about 20 kA. In order to improve the LHW power deposition in the plasma core through an up-shift of the parallel wavenumber during the first pass through the plasma, a new top-launch antenna was designed, fabricated and installed. The plasma current ramp-up to 12 kA was achieved using the top-launch antenna alone in a preliminary experiment. Ray-tracing calculations using the measured plasma parameters showed a large up-shift during the first pass, satisfying the strong electron Landau damping condition in the plasma core.

  8. Design and Implementation of a 200kW, 28GHz gyrotron system for the Compact Toroidal Hybrid Experiment

    Science.gov (United States)

    Hartwell, G. J.; Knowlton, S. F.; Ennis, D. A.; Maurer, D. A.; Bigelow, T.

    2016-10-01

    The Compact Toroidal Hybrid (CTH) is an l = 2 , m = 5 torsatron/tokamak hybrid (R0 = 0.75 m, ap 0.2 m, and | B | supplement the existing 15 kW klystron system operating at the fundamental frequency; the latter will be used to initially generate the plasma. Ray-tracing calculations that guide the selection of launching position, antenna focal length, and beam-steering characteristics of the ECRH have been performed with the TRAVIS code [ 1 ] . The calculated absorption is up to 95.7% for vertically propagating rays, however, the absorption is more sensitive to magnetic field variations than for a side launch where the field gradient is tokamak-like. The design of the waveguide path and components for the top-launch scenario will be presented. This work is supported by U.S. Department of Energy Grant No. DE-FG02-00ER54610.

  9. The Application of Statistical Design of Experiments to Study the In-Plane Shear Behaviour of Hybrid Composite Sandwich Panel

    Directory of Open Access Journals (Sweden)

    Fajrin J.

    2016-03-01

    Full Text Available This paper presents a statistical aspect of experimental study on the in-plane shear behaviour of hybrid composite sandwich panel with intermediate layer. The study was aimed at providing information of how significant the contribution of intermediate layer to the in-plane shear behaviour of new developed sandwich panel. The investigation was designed as a single factor experimental design and the results were throughly analysed with statistics software; Minitab 15. The panels were tested by applying a tensile force along the diagonal of the test frame simulating pure shear using a 100 kN MTS servo-hydraulic UTM. The result shows that the incorporation of intermediate layer has sinificantly enhanced the in-plane shear behaviour of hybrid composite sandwich panel. The statistical analysis shows that the value of F0 is much higher than the value of Ftable, which has a meaning that the improvement provided by the incorporation of intermediate layer is statistically significant.

  10. Comparative proteomic analysis of a membrane-enriched fraction from flag leaves reveals responses to chemical hybridization agent SQ-1 in wheat

    Directory of Open Access Journals (Sweden)

    Qilu eSong

    2015-08-01

    Full Text Available The induction of wheat male fertile lines by using the chemical hybridizing agent SQ-1 (CHA-SQ-1 is an effective approach in the utilization of heterosis; however, the molecular basis of male fertility remains unknown. Wheat flag leaves are the initial receptors of CHA-SQ-1 and their membrane structure plays a vital role in response to CHA-SQ-1 stress. To investigate the response of wheat flag leaves to CHA-SQ-1 stress, we compared their quantitative proteomic profiles in the absence and presence of CHA-SQ-1. Our results indicated that wheat flag leaves suffered oxidative stress during CHA-SQ-1 treatments. Leaf O2-, H2O2, and malonaldehyde levels were significantly increased within 10 h after CHA-SQ-1 treatment, while the activities of major antioxidant enzymes such as superoxide dismutase, catalase, and guaiacol peroxidase were significantly reduced. Proteome profiles of membrane-enriched fraction showed a change in the abundance of a battery of membrane proteins involved in multiple biological processes. These variable proteins mainly impaired photosynthesis, ATP synthesis protein mechanisms and were involved in the response to stress. These results provide an explanation of the relationships between membrane proteomes and anther abortion and the practical application of CHA for hybrid breeding.

  11. Comparative Proteomic, Physiological, Morphological, and Biochemical Analyses Reveal the Characteristics of the Diploid Spermatozoa of Allotetraploid Hybrids of Red Crucian Carp (Carassius auratus) and Common Carp (Cyprinus carpio).

    Science.gov (United States)

    Duan, Wei; Xu, Kang; Hu, Fangzhou; Zhang, Yi; Wen, Ming; Wang, Jing; Tao, Min; Luo, Kaikun; Zhao, Rurong; Qin, Qinbo; Zhang, Chun; Liu, Jinhui; Liu, Yun; Liu, Shaojun

    2016-02-01

    The generation of diploid spermatozoa is essential for the continuity of tetraploid lineages. The DNA content of diploid spermatozoa from allotetraploid hybrids of red crucian carp and common carp was nearly twice as great as that of haploid spermatozoa from common carp, and the durations of rapid and slow progressive motility were longer. We performed comparative proteomic analyses to measure variations in protein composition between diploid and haploid spermatozoa. Using two-dimensional electrophoresis followed by liquid chromatography tandem mass spectrometry, 21 protein spots that changed in abundance were analyzed. As the common carp and the allotetraploid hybrids are not fully sequenced organisms, we identified proteins by Mascot searching against the National Center for Biotechnology Information non-redundant (NR) protein database for the zebrafish (Danio rerio), and verified them against predicted homologous proteins derived from transcriptomes of the testis. Twenty protein spots were identified successfully, belonging to four gene ontogeny categories: cytoskeleton, energy metabolism, the ubiquitin-proteasome system, and other functions, indicating that these might be associated with the variation in diploid spermatozoa. This categorization of variations in protein composition in diploid spermatozoa will provide new perspectives on male polyploidy. Moreover, our approach indicates that transcriptome data are useful for proteomic analyses in organisms lacking full protein sequences.

  12. Systematic defect donor levels in III-V and II-VI semiconductors revealed by hybrid functional density-functional theory

    Science.gov (United States)

    Petretto, Guido; Bruneval, Fabien

    2015-12-01

    The identification of defect levels from photoluminescence spectroscopy is a useful but challenging task. Density-functional theory (DFT) is a highly valuable tool to this aim. However, the semilocal approximations of DFT that are affected by a band gap underestimation are not reliable to evaluate defect properties, such as charge transition levels. It is now established that hybrid functional approximations to DFT improve the defect description in semiconductors. Here we demonstrate that the use of hybrid functionals systematically stabilizes donor defect states in the lower part of the band gap for many defects, impurities or vacancies, in III-V and in II-VI semiconductors, even though these defects are usually considered as acceptors. These donor defect states are a very general feature and, to the best of our knowledge, have been overlooked in previous studies. The states we identify here may challenge the older assignments to photoluminescent peaks. Though appealing to screen quickly through the possible stable charge states of a defect, semilocal approximations should not be trusted for that purpose.

  13. Variations of 18S rDNA Loci Among Six Populations of Paeonia obovata Maxim. (Paeoniaceae) Revealed by Fluorescence In Situ Hybridization

    Institute of Scientific and Technical Information of China (English)

    Rui Luo; Chao Wang; Daming Zhang

    2006-01-01

    The localization of 18S ribosomal RNA genes (rDNA) by fluorescence in situ hybridization (FISH) had been performed for some species of Paeonia. However, the pattern of 18S rDNA loci among populations is indistinct. In the present study, we localized 18S rDNA loci on meiotic or mitotic chromosomes of six populations of Paeonia obovata Maxim. (Paeoniaceae). Different numbers of rDNA loci were found with different diploid (2n=10) populations, namely eight (Lushi and Mt. Jiuhua populations), 10 (Mt. Taibai population), and seven (Mt. Guandi population), whereas tetraploid (2n=20) populations were all found with 16 loci. All rDNA loci were mapped near telomeres of mitotic chromosomes and there was no chromosome with two loci. The present results show that molecular cytological polymorphism exists among P. obovata diploid populations, indicating that structural variations occurred frequently during the evolutionary history of this species, accompanied with differentiation among populations.

  14. Dual-color fluorescence in situ hybridization reveals an association of chromosome 8q22 but not 8p21 imbalance with high grade invasive breast carcinoma.

    Science.gov (United States)

    Walker, Logan C; McDonald, Margaret; Wells, J Elisabeth; Harris, Gavin C; Robinson, Bridget A; Morris, Christine M

    2013-01-01

    We previously reported molecular karyotype analysis of invasive breast tumour core needle biopsies by comparative genomic hybridization (CGH) and fluorescence in situ hybridization (FISH) (Walker et al, Genes Chromosomes Cancer, 2008 May;47(5):405-17). That study identified frequently recurring gains and losses involving chromosome bands 8q22 and 8p21, respectively. Moreover, these data highlighted an association between 8q22 gain and typically aggressive grade 3 tumors. Here we validate and extend our previous investigations through FISH analysis of tumor touch imprints prepared from excised breast tumor specimens. Compared to post-surgical tumor excisions, core needle biopsies are known to be histologically less precise when predicting tumor grade. Therefore investigating these chromosomal aberrations in tumor samples that offer more reliable pathological assessment is likely to give a better overall indication of association. A series of 60 breast tumors were screened for genomic copy number changes at 8q22 and 8p21 by dual-color FISH. Results confirm previous findings that 8p loss (39%) and 8q gain (74%) occur frequently in invasive breast cancer. Both absolute quantification of 8q22 gain across the sample cohort, and a separate relative assessment by 8q22:8p21 copy number ratio, showed that the incidence of 8q22 gain significantly increased with grade (p = 0.004, absolute and p = 0.02, relative). In contrast, no association was found between 8p21 loss and tumor grade. These findings support the notion that 8q22 is a region of interest for invasive breast cancer pathogenesis, potentially harboring one or more genes that, when amplified, precipitate the molecular events that define high tumor grade.

  15. Dual-color fluorescence in situ hybridization reveals an association of chromosome 8q22 but not 8p21 imbalance with high grade invasive breast carcinoma.

    Directory of Open Access Journals (Sweden)

    Logan C Walker

    Full Text Available We previously reported molecular karyotype analysis of invasive breast tumour core needle biopsies by comparative genomic hybridization (CGH and fluorescence in situ hybridization (FISH (Walker et al, Genes Chromosomes Cancer, 2008 May;47(5:405-17. That study identified frequently recurring gains and losses involving chromosome bands 8q22 and 8p21, respectively. Moreover, these data highlighted an association between 8q22 gain and typically aggressive grade 3 tumors. Here we validate and extend our previous investigations through FISH analysis of tumor touch imprints prepared from excised breast tumor specimens. Compared to post-surgical tumor excisions, core needle biopsies are known to be histologically less precise when predicting tumor grade. Therefore investigating these chromosomal aberrations in tumor samples that offer more reliable pathological assessment is likely to give a better overall indication of association. A series of 60 breast tumors were screened for genomic copy number changes at 8q22 and 8p21 by dual-color FISH. Results confirm previous findings that 8p loss (39% and 8q gain (74% occur frequently in invasive breast cancer. Both absolute quantification of 8q22 gain across the sample cohort, and a separate relative assessment by 8q22:8p21 copy number ratio, showed that the incidence of 8q22 gain significantly increased with grade (p = 0.004, absolute and p = 0.02, relative. In contrast, no association was found between 8p21 loss and tumor grade. These findings support the notion that 8q22 is a region of interest for invasive breast cancer pathogenesis, potentially harboring one or more genes that, when amplified, precipitate the molecular events that define high tumor grade.

  16. Laboratory experiments, high angular-resolution EBSD, and micromechanical modelling reveal residual stresses and their distribution in deformed olivine

    Science.gov (United States)

    Hansen, Lars; Wallis, David; Kempton, Imogen; Lebensohn, Ricardo; Wilkinson, Angus

    2017-04-01

    During high-temperature deformation of rocks, stresses are predicted to be distributed heterogeneously throughout the constituent grains. After unloading, much of this stress is potentially retained in the aggregate as residual stress, a phenomenon that may have large-scale geodynamic implications. After large stress changes in the solid Earth (e.g., glacial unloading or post-seismic relaxation), residual stresses can affect the immediate mechanical response of the rocks. Furthermore, examination of residual stresses in naturally deformed rocks additionally presents an opportunity to learn about ancient deformation events. These residual stresses arise from the anisotropic nature of the mechanical properties of minerals and from the heterogeneous substructures that form within grains (e.g., dislocation arrays and subgrain boundaries). This heterogeneity is therefore related to mechanical interactions on short (e.g., between individual dislocations), intermediate (e.g., between groups of dislocations), and long (e.g., between grains of differing orientation) spatial scales. We examine residual stresses in upper mantle analogues with three different methods. First, stress-dip tests were conducted on olivine single crystals at temperatures greater than 1250°C in a new uniaxial deformation apparatus with a piezoelectric actuator. These experiments reveal that the average residual stresses stored in deformed single crystals can be on the order of 50% of the applied differential stress. However, the magnitude of residual stress is likely a function of crystal orientation during deformation. Second, high angular-resolution electron backscatter diffraction (HR-EBSD) allows the residual stresses in deformed single crystals and polycrystals to be mapped with <1 micron spatial resolution. HR-EBSD mapping reveals stress heterogeneities on the order of differential stresses applied during deformation. Stresses averaged over each map are in reasonable agreement with the outcome

  17. A model for the operation of perovskite based hybrid solar cells: formulation, analysis, and comparison to experiment\\ud

    OpenAIRE

    Foster, Jamie M.; Snaith, Henry J.; Leijtens, Tomas; Richardson, Giles

    2014-01-01

    This work is concerned with the modeling of perovskite based hybrid solar cells formed by sandwiching a slab of organic lead halide perovskite (CH$_3$NH$_3$PbI$_{3-x}$Cl$_x$) photo-absorber between (n-type) acceptor and (p-type) donor materials---typically titanium dioxide and spiro. A model for the electrical behavior of these cells is formulated based on drift-diffusion equations for the motion of the charge carriers and Poisson's equation for the electric potential. It is closed by (i) int...

  18. Ultrasoft 1.5 keV aluminum K X rays are efficient producers of complex chromosome exchange aberrations as revealed by fluorescence in situ hybridization.

    Science.gov (United States)

    Griffin, C S; Stevens, D L; Savage, J R

    1996-08-01

    The electron pairs generated by ultrasoft 1.5 keV aluminum K X-ray photons deposit their energy in tracks of length < 70 nm and provide an ideal tool for analyzing the spatial distribution of breaks and misrepair processes. We have undertaken the analysis of changes in chromosome structure produced by aluminum K X rays in untransformed HF12 human fibroblasts in G1 phase using fluorescence in situ hybridization (FISH). Multicolored chromosome-specific DNA probes for chromosomes 1 and 2 and an alpha-satellite pan-centromeric probe were used to examine in vitro radiation-induced chromosome-type exchange aberrations. After mean doses of 0.37-2.93 Gy the relative frequencies of complex exchanges, derived from three or more breaks in two or more chromosomes, ranged from 15-35%. For the classic break-age-and-rejoining theory to hold, very large interaction distances are needed to account for this high frequency of multibreak interactions, unless many sites pre-exist where several different chromosomes come very close together. Alternatively, damaged DNA may be able to interact with adjacent undamaged DNA, obviating the need for large rejoining distances.

  19. Transcriptome profiles of hybrid poplar (Populus trichocarpa × deltoides) reveal rapid changes in undamaged, systemic sink leaves after simulated feeding by forest tent caterpillar (Malacosoma disstria).

    Science.gov (United States)

    Philippe, Ryan N; Ralph, Steven G; Mansfield, Shawn D; Bohlmann, Jörg

    2010-11-01

    • Poplar has been established as a model tree system for genomic research of the response to biotic stresses. This study describes a series of induced transcriptome changes and the associated physiological characterization of local and systemic responses in hybrid poplar (Populus trichocarpa × deltoides) after simulated herbivory. • Responses were measured in local source (LSo), systemic source (SSo), and systemic sink (SSi) leaves following application of forest tent caterpillar (Malacosoma disstria) oral secretions to mechanically wounded leaves. • Transcriptome analyses identified spatially and temporally dynamic, distinct patterns of local and systemic gene expression in LSo, SSo and SSi leaves. Galactinol synthase was strongly and rapidly upregulated in SSi leaves. Genome analyses and full-length cDNA cloning established an inventory of poplar galactinol synthases. Induced changes of galactinol and raffinose oligosaccharides were detected by anion-exchange high-pressure liquid chromatography. • The LSo leaves showed a rapid and strong transcriptome response compared with a weaker and slower response in adjacent SSo leaves. Surprisingly, the transcriptome response in distant, juvenile SSi leaves was faster and stronger than that observed in SSo leaves. Systemic transcriptome changes of SSi leaves have signatures of rapid change of metabolism and signaling, followed by later induction of defense genes.

  20. Hybrids monosomal for human chromosome 5 reveal the presence of a spinal muscular atrophy (SMA) carrier with two SMN1 copies on one chromosome.

    Science.gov (United States)

    Mailman, M D; Hemingway, T; Darsey, R L; Glasure, C E; Huang, Y; Chadwick, R B; Heinz, J W; Papp, A C; Snyder, P J; Sedra, M S; Schafer, R W; Abuelo, D N; Reich, E W; Theil, K S; Burghes, A H; de la Chapelle, A; Prior, T W

    2001-02-01

    We have analyzed the survival motor neuron gene (SMN1) dosage in 100 parents of children with homozygous SMN1 deletions. Of these parents, 96 (96%) demonstrated the expected one-copy SMN1 carrier genotype. However, four parents (4%) were observed to have a normal two-copy SMN1 dosage. The presence of two intact SMN1 genes in the parent of an affected child indicates either the occurrence of a de novo mutation event or a situation in which one chromosome has two copies of SMN1, whereas the other is null. We have separated individual chromosomes from two of these parents with two-copy SMN1 dosage by somatic cell hybridization and have employed a modified quantitative dosage assay to provide direct evidence that one parent is a two-copy/ zero-copy SMN1 carrier, whereas the other parent had an affected child as the result of a de novo mutation. These findings are important for assessing the recurrence risk of parents of children with spinal muscular atrophy and for providing accurate family counseling.

  1. The many lives of experiments: Wilhelm Johannsen, selection, hybridization, and the complex relations of genes and characters.

    Science.gov (United States)

    Meunier, Robert

    2016-04-01

    In addition to his experiments on selection in pure lines, Wilhelm Johannsen (1857-1927) performed less well-known hybridisation experiments with beans. This article describes these experiments and discusses Johannsen's motivations and interpretations, in the context of developments in early genetics. I will show that Johannsen first presented the hybridisation experiments as an additional control for his selection experiments. The latter were dedicated to investigating heredity with respect to debates concerning the significance of natural selection of continuous variation for evolution. In the course of the establishment of a Mendelian research program after 1900, the study of heredity gained increasing independence from questions of evolution, and focused more on the modes and mechanisms of heredity. Further to their role as control experiments, Johannsen also saw his hybridisation experiments as contributing to the Mendelian program, by extending the scope of the principles of Mendelian inheritance to quantitative characters. Towards the end of the first decade of genetics, Johannsen revisited his experiments to illustrate the many-many relationship between genes and characters, at a time when that relationship appeared increasingly complex, and the unit-character concept, accordingly, became inadequate. For the philosophy of science, the example shows that experiments can have multiple roles in a research programme, and can be interpreted in the light of questions other than those that motivated the experiments in the first place.

  2. Prenatal detection of aneuploidies using fluorescence in situ hybridization: A preliminary experience in an Indian set up

    Indian Academy of Sciences (India)

    Vaidehi Jobanputra; Kalol Kumar Roy; Kiran Kucheria

    2002-03-01

    Fluorescence in situ hybridization (FISH) is a powerful molecular cytogenetic technique which allows rapid detection of aneuploidies on interphase cells and metaphase spreads. The aim of the present study was to evaluate FISH as a tool in prenatal diagnosis of aneuploidies in high risk pregnancies in an Indian set up. Prenatal diagnosis was carried out in 88 high-risk pregnancies using FISH and cytogenetic analysis. Multicolour commercially available FISH probes specific for chromosomes 13, 18, 21, X and Y were used. Interphase FISH was done on uncultured cells from chorionic villus and amniotic fluid samples. FISH on metaphase spreads was done from cord blood samples. The results of FISH were in conformity with the results of cytogenetic analysis in all the normal and aneuploid cases except in one case of structural chromosomal abnormality. The hybridization efficiency of the 5 probes used for the detection of aneuploidies was 100%. Using these probes FISH assay yielded discrete differences in the signal profiles between cytogenetically normal and abnormal samples. The overall mean interphase disomic signal patterns of chromosomes 13, 18, 21, X and Y were 94.45%; for interphase trisomic signal pattern of chromosome 21 was 97.3%. Interphase FISH is very useful in urgent high risk cases. The use of FISH overcomes the difficulties of conventional banding on metaphase spreads and reduces the time of reporting. However, with the limited number of probes used, the conventional cytogenetic analysis serves as a gold standard at present. It should be employed as an adjunctive tool to conventional cytogenetics.

  3. Hybrid Baryons

    CERN Document Server

    Page, P R

    2003-01-01

    We review the status of hybrid baryons. The only known way to study hybrids rigorously is via excited adiabatic potentials. Hybrids can be modelled by both the bag and flux-tube models. The low-lying hybrid baryon is N 1/2^+ with a mass of 1.5-1.8 GeV. Hybrid baryons can be produced in the glue-rich processes of diffractive gamma N and pi N production, Psi decays and p pbar annihilation.

  4. Lung tattooing combined with immediate video-assisted thoracoscopic resection (IVATR) as a single procedure in a hybrid room: our institutional experience in a pediatric population.

    Science.gov (United States)

    Narayanam, Surendra; Gerstle, Ted; Amaral, Joao; John, Philip; Parra, Dimitri; Temple, Michael; Connolly, Bairbre

    2013-09-01

    Analysis of small pulmonary nodules in children poses an important diagnostic and therapeutic challenge for clinicians. To review our experience of lung tattooing with immediate video-assisted thoracoscopic resection (IVATR) performed as a single procedure in a hybrid room for technical difficulties, complications and diagnostic yield of the procedure. Retrospective analysis of 31 children (16 boys, 15 girls) who underwent lung tattooing of various lesions from January 2001 to July 2011. Data were collected from the Interventional Radiology database, Electronic Patient Chart (EPC) and PACS. A total of 34 lesions were treated in 31 children. Tattooing was performed on lung lesions with median size 3 mm and median depth 2 mm from pleura. Technical success was 91.1% and diagnostic yield was 100%. In seven children, it was combined with other interventional radiologic procedures. The median procedure time for lung tattooing and IVATR was 197 min. Lung tattooing with IVATR as a single procedure in a hybrid room is safe and effective in children with several inherent advantages, including avoiding the need to move the child from the interventional radiology suite to the operating room.

  5. Disability, family and technical aids: a study of how disabling/enabling experiences come about in hybrid family relations

    NARCIS (Netherlands)

    Horst, van der H.M.; Hoogsteyns, M.

    2014-01-01

    Research regarding disabling situations generally focuses on disabling situations within a public society ‘out there’. In our research, however, the intimate family setting itself appears central to the emergence of dis/enabling experiences. Moreover, the relationships that shaped these experiences

  6. Ambiguity revealed

    OpenAIRE

    Bayer, Ralph-C; Bose, Subir; Polisson, Matthew; Renou, Ludovic

    2013-01-01

    We derive necessary and sufficient conditions for data sets composed of state-contingent prices and consumption to be consistent with two prominent models of decision making under uncertainty: variational preferences and smooth ambiguity. The revealed preference conditions for subjective expected utility, maxmin expected utility, and multiplier preferences are characterised as special cases. We implement our tests on data from a portfolio choice experiment.

  7. Subunit orientation in the Escherichia coli enterobactin biosynthetic EntA-EntE complex revealed by a two-hybrid approach.

    Science.gov (United States)

    Pakarian, Paknoosh; Pawelek, Peter D

    2016-08-01

    The siderophore enterobactin is synthesized by the enzymes EntA-F and EntH in the Escherichia coli cytoplasm. We previously reported in vitro evidence of an interaction between tetrameric EntA and monomeric EntE. Here we used bacterial adenylate cyclase two-hybrid (BACTH) assays to demonstrate that the E. coli EntA-EntE interaction occurs intracellularly. Furthermore, to obtain information on subunit orientation in the EntA-EntE complex, we fused BACTH reporter fragments T18 and T25 to EntA and EntE in both N-terminal and C-terminal orientations. To validate functionality of our fusion proteins, we performed Chrome Azurol S (CAS) assays using E. coli entE(-) and entA(-) knockout strains transformed with our BACTH constructs. We found that transformants expressing N-terminal and C-terminal T18/T25 fusions to EntE exhibited CAS signals, indicating that these constructs could rescue the entE(-) phenotype. While expression of EntA with N-terminal T18/T25 fusions exhibited CAS signals, C-terminal fusions did not, presumably due to disruption of the EntA tetramer in vivo. Bacterial growth assays supported our CAS findings. Co-transformation of functional T18/T25 fusions into cya(-)E. coli BTH101 cells resulted in positive BACTH signals only when T18/T25 fragments were fused to the N-termini of both EntA and EntE. Co-expression of N-terminally fused EntA with C-terminally fused EntE resulted in no detectable BACTH signal. Analysis of protein expression by Western blotting confirmed that the loss of BACTH signal was not due to impaired expression of fusion proteins. Based on our results, we propose that the N-termini of EntA and EntE are proximal in the intracellular complex, while the EntA N-terminus and EntE C-terminus are distal. A protein-protein docking simulation using SwarmDock was in agreement with our experimental observations.

  8. A Model for the Operation of Perovskite Based Hybrid Solar Cells: Formulation, Analysis, and Comparison to Experiment

    KAUST Repository

    Foster, J. M.

    2014-01-01

    This work is concerned with the modeling of perovskite based hybrid solar cells formed by sandwiching a slab of organic lead halide perovskite (CH3NH3PbI3-xClx) photo-absorber between (n-type) acceptor and (p-type) donor materialstypically titanium dioxide and spiro. A model for the electrical behavior of these cells is formulated based on drift-diffusion equations for the motion of the charge carriers and Poisson\\'s equation for the electric potential. It is closed by (i) internal interface conditions accounting for charge recombination/generation and jumps in charge carrier densities arising from differences in the electron affinity/ionization potential between the materials and (ii) ohmic boundary conditions on the contacts. The model is analyzed by using a combination of asymptotic and numerical techniques. This leads to an approximateyet highly accurateexpression for the current-voltage relationship as a function of the solar induced photocurrent. In addition, we show that this approximate current-voltage relation can be interpreted as an equivalent circuit model consisting of three diodes, a resistor, and a current source. For sufficiently small biases the device\\'s behavior is diodic and the current is limited by the recombination at the internal interfaces, whereas for sufficiently large biases the device acts like a resistor and the current is dictated by the ohmic dissipation in the acceptor and donor. The results of the model are also compared to experimental current-voltage curves, and good agreement is shown.

  9. On a saturation mechanism of two-upper-hybrid-plasmon parametric decay instability in the second harmonic ECRH experiment

    Science.gov (United States)

    Gusakov, E. Z.; Popov, A. Yu

    2017-02-01

    The nonlinear saturation of low-power-threshold two-upper-hybrid (UH)-plasmon parametric decay instability (PDI) of an extraordinary pump wave-excited in the presence of a nonmonotonous density profile is analyzed in detail. It is shown that the primary absolute PDI enhancing the UH wave fluctuations from the thermal noise level, which was analyzed in linear approximation in Popov and Gusakov (2015 Plasma Phys. Control. Fusion 57 025022), is saturated due to a secondary low-threshold decay of the daughter UH wave. The secondary decay leads to excitation of the secondary UH wave, downshifted in frequency and also trapped in the vicinity of the local maximum of the density profile, and the ion Bernstein wave. A set of equations describing the primary and secondary decays and accounting for the finite pump-beam width is derived and solved numerically. The results of numerical modeling are shown to be in agreement with an analytical estimation of the growth rates of both the primary and secondary parametric decays and of the saturation level. The anomalous absorption of the pump wave due to the two plasmon PDI is estimated at a level of 6% for the plasma density profile considered in the paper.

  10. Detection of chromosomal abnormalities by comparative genomic hybridization.

    Science.gov (United States)

    Lapierre, Jean-Michel; Tachdjian, Gérard

    2005-04-01

    Comparative genomic hybridization (CGH) is a modified in-situ hybridization technique. In this type of analysis, two differentially labeled genomic DNAs (study and reference) are cohybridized to normal metaphase spreads or to microarray. Chromosomal locations of copy number changes in the DNA segments of the study genome are revealed by a variable fluorescence intensity ratio along each target chromosome. Thus, CGH allows detection and mapping of DNA sequence copy differences between two genomes in a single experiment. Since its development, comparative genomic hybridization has been applied mostly as a research tool in the field of cancer cytogenetics to identify genetic changes in many previously unknown regions. It is also a powerful tool for detection and identification of unbalanced chromosomal abnormalities in prenatal, postnatal and preimplantation diagnostics. The development of comparative genomic hybridization and increase in resolution analysis by using the microarray-based technique offer new information on chromosomal pathologies and thus better management of patients.

  11. Numerical simulation of the marine boundary layer characteristics over the Bay of Bengal as revealed by BOBMEX-98 Pilot experiment

    Indian Academy of Sciences (India)

    A N V Satyanarayana; U C Mohanty; N V Sam; Swati Basu; V N Lykossov

    2000-06-01

    An attempt has been made to study the marine boundary layer characteristics over Bay of Bengal using BOBMEX (Bay of Bengal and Monsoon Experiment) pilot experiment data sets, which was conducted between 23rd October and 12th November 1998 on board ORV Sagar Kanya. A one-dimensional multi- level atmospheric boundary layer with TKE- closure scheme is employed to study the marine boundary layer characteristics. In this study two synoptic situations are chosen: one represents an active convection case and the other a suppressed convection. In the present article the marine boundary layer charac- teristics such as temporal evolution of turbulent kinetic energy, height of the boundary layer and the air- sea exchange processes such as sensible and latent heat fluxes, drag coefficient for momentum are simulated during both active and suppressed convection. Marine boundary layer height is estimated from the vertical profiles of potential temperature using the stability criterion. The model simulations are compared with the available observations.

  12. Design of experiments reveals critical parameters for pilot-scale freeze-and-thaw processing of L-lactic dehydrogenase.

    Science.gov (United States)

    Roessl, Ulrich; Humi, Sebastian; Leitgeb, Stefan; Nidetzky, Bernd

    2015-09-01

    Freezing constitutes an important unit operation of biotechnological protein production. Effects of freeze-and-thaw (F/T) process parameters on stability and other quality attributes of the protein product are usually not well understood. Here a design of experiments (DoE) approach was used to characterize the F/T behavior of L-lactic dehydrogenase (LDH) in a 700-mL pilot-scale freeze container equipped with internal temperature and pH probes. In 24-hour experiments, target temperature between -10 and -38°C most strongly affected LDH stability whereby enzyme activity was retained best at the highest temperature of -10°C. Cooling profile and liquid fill volume also had significant effects on LDH stability and affected the protein aggregation significantly. Parameters of the thawing phase had a comparably small effect on LDH stability. Experiments in which the standard sodium phosphate buffer was exchanged by Tris-HCl and the non-ionic surfactant Tween 80 was added to the protein solution showed that pH shift during freezing and protein surface exposure were the main factors responsible for LDH instability at the lower freeze temperatures. Collectively, evidence is presented that supports the use of DoE-based systematic analysis at pilot scale in the identification of F/T process parameters critical for protein stability and in the development of suitable process control strategies.

  13. Experiments performed in order to reveal fundamental differences between the diffraction and interference of waves and electrons

    CERN Document Server

    Demjanov, Victor V

    2010-01-01

    Diffraction patterns of electrons are believed to resemble those of electromagnetic waves (EMW). I performed a series of experiments invoked to show that the periodicity of peaks in the diffraction diagram of electrons is concerned with the periodicity of the arrangement of scattering centers in the diffraction grating in combination with the supposed character of the spatial structure of the electron as a system of regularly spaced concentric shells of elasticity. I started from the experiment on the diffraction of electrons and EMWs at the sharp edge of the opaque half-plane. This simple scattering configuration enabled me to discriminate between the re-radiation mechanism of the wave diffraction and ricochet scattering of electrons on the edge of the half-plane. Then I made experiments with scattering on composite objects proceeding step by step from a single straight edge to a couple of edges (one slit) and then to four edges (two slits). Thus I succeeded in interpretation of the double-slit diffraction (...

  14. Too poor to be green consumers? A field experiment on revealed preferences for firewood in rural Guatemala

    Energy Technology Data Exchange (ETDEWEB)

    Van Kempen, Luuk; Muradian, Roldan [Centre for International Development Issues Nijmegen (CIDIN), Radboud University Nijmegen (Netherlands); Sandoval, Cesar [Instituto de Agricultura, Recursos Naturales y Ambiente (IARNA), Universidad Rafael Landivar (Guatemala); Castaneda, Juan-Pablo [Instituto de Agricultura, Recursos Naturales y Ambiente (IARNA), Universidad Rafael Landivar (Guatemala); Development Research Institute (IVO), Tilburg University (Netherlands)

    2009-05-15

    The paper reports on a field experiment that investigates whether households in Guatemala are willing to surrender a small material gain in order to buy legal rather than illegal firewood. Given the ineffectiveness of command-and-control policies to curb the problem of illegal logging in Guatemala, the experiment assesses the potential viability of market-oriented solutions. Local consumers in developing countries are generally believed to be too poor to pay a premium for green/ethical products. Therefore, little information has been gathered on willingness-to-pay (WTP) for such products and its determinants in non-affluent consumer markets. While our experiment on firewood consumption in central Guatemala only implies a weak and indirect test of WTP for green products, the results indicate that it is premature, if not unwarranted, to assume that the poor are not ready to make pro-ethical choices in the marketplace. Moreover, we find that information on the legal procedures for firewood extraction significantly affects consumer choice between legal and illegal firewood. (author)

  15. Brain-based decoding of mentally imagined film clips and sounds reveals experience-based information patterns in film professionals.

    Science.gov (United States)

    de Borst, Aline W; Valente, Giancarlo; Jääskeläinen, Iiro P; Tikka, Pia

    2016-04-01

    In the perceptual domain, it has been shown that the human brain is strongly shaped through experience, leading to expertise in highly-skilled professionals. What has remained unclear is whether specialization also shapes brain networks underlying mental imagery. In our fMRI study, we aimed to uncover modality-specific mental imagery specialization of film experts. Using multi-voxel pattern analysis we decoded from brain activity of professional cinematographers and sound designers whether they were imagining sounds or images of particular film clips. In each expert group distinct multi-voxel patterns, specific for the modality of their expertise, were found during classification of imagery modality. These patterns were mainly localized in the occipito-temporal and parietal cortex for cinematographers and in the auditory cortex for sound designers. We also found generalized patterns across perception and imagery that were distinct for the two expert groups: they involved frontal cortex for the cinematographers and temporal cortex for the sound designers. Notably, the mental representations of film clips and sounds of cinematographers contained information that went beyond modality-specificity. We were able to successfully decode the implicit presence of film genre from brain activity during mental imagery in cinematographers. The results extend existing neuroimaging literature on expertise into the domain of mental imagery and show that experience in visual versus auditory imagery can alter the representation of information in modality-specific association cortices.

  16. Seismic Reflectivity Evolution Beneath Sakurajima Volcano, Japan, from 2009 through 2014, Revealed with Rounds of Controlled-source Seismic Experiments

    Science.gov (United States)

    Tsutsui, T.; Iguchi, M.; Tameguri, T.; Nakamichi, H.

    2015-12-01

    Evolution in seismic reflectivity is detected beneath an active volcano, Sakurajima Volcano, from 2009 through 2014 with using controlled seismic experiments . The reflectivity variation is interpreted to associate with discharging magma. Sakurajima Volcano is the target of this study, which is one of the most active volcanoes in Japan. Seven rounds of the seismic experiment with controlled sources have been conducted annually in the volcano. Two seismic reflection profiles tied up are obtained from the datasets under successful reproduction during rounds. Clear annual variation in seismic reflectivity at 6.2km depth is detected in the northeastern part of Sakurajima during the rounds. The reflectivity marked its maximum on December 2009 on the first intrusion of magma and decreased gradually until December 2013, which coincides with inflation and following deflation in Sakurajima Volcano. The active reflector at 6.2km depth occupies a part of embedded clear reflector. A sandwich structure is invoked as the reflector model. Intrusion of fresh and high temperature magma into the intermediate layer of the model and its decline explains the variation range of reflectivity successfully. Our study presents one of new approaches for sensing magma properties instantaneously and for monitoring active volcanoes.

  17. Phenotypic characterization of Leishmania spp. causing cutaneous leishmaniasis in the lower Amazon region, western Pará state, Brazil, reveals a putative hybrid parasite, Leishmania (Viannia guyanensis × Leishmania (Viannia shawi shawi

    Directory of Open Access Journals (Sweden)

    Jennings Yara Lins

    2014-01-01

    Full Text Available We phenotypically characterized 43 leishmanial parasites from cutaneous leishmaniasis by isoenzyme electrophoresis and the indirect immunofluorescence antibody test (23 McAbs. Identifications revealed 11 (25.6% strains of Leishmania (V. braziliensis, 4 (9.3% of L. (V. shawi shawi, 7 (16.3% of L. (V. shawi santarensis, 6 (13.9% of L. (V. guyanensis and L. (V. lainsoni, 2 (4.7% of L. (L. amazonensis, and 7 (16.3% of a putative hybrid parasite, L. (V. guyanensis/L. (V. shawi shawi. McAbs detected three different serodemes of L. (V. braziliensis: I-7, II-1, and III-3 strains. Among the strains of L. (V. shawi we identified two populations: one (7 strains expressing the B19 epitope that was previously considered to be species-specific for L. (V. guyanensis. We have given this population sub-specific rank, naming it L. (V. s. santarensis. The other one (4 strains did not express the B19 epitope like the L. (V. shawi reference strain, which we now designate as L. (V. s. shawi. For the first time in the eastern Brazilian Amazon we register a putative hybrid parasite (7 strains, L. (V. guyanensis/L. (V. s. shawi, characterized by a new 6PGDH three-band profile at the level of L. (V. guyanensis. Its PGM profile, however, was very similar to that of L. (V. s. shawi. These results suggest that the lower Amazon region – western Pará state, Brazil, represents a biome where L. (V. guyanensis and L. (V. s. shawi exchange genetic information.

  18. Genome-wide comparative analysis reveals similar types of NBS genes in hybrid Citrus sinensis genome and original Citrus clementine genome and provides new insights into non-TIR NBS genes.

    Directory of Open Access Journals (Sweden)

    Yunsheng Wang

    Full Text Available In this study, we identified and compared nucleotide-binding site (NBS domain-containing genes from three Citrus genomes (C. clementina, C. sinensis from USA and C. sinensis from China. Phylogenetic analysis of all Citrus NBS genes across these three genomes revealed that there are three approximately evenly numbered groups: one group contains the Toll-Interleukin receptor (TIR domain and two different Non-TIR groups in which most of proteins contain the Coiled Coil (CC domain. Motif analysis confirmed that the two groups of CC-containing NBS genes are from different evolutionary origins. We partitioned NBS genes into clades using NBS domain sequence distances and found most clades include NBS genes from all three Citrus genomes. This suggests that three Citrus genomes have similar numbers and types of NBS genes. We also mapped the re-sequenced reads of three pomelo and three mandarin genomes onto the C. sinensis genome. We found that most NBS genes of the hybrid C. sinensis genome have corresponding homologous genes in both pomelo and mandarin genomes. The homologous NBS genes in pomelo and mandarin suggest that the parental species of C. sinensis may contain similar types of NBS genes. This explains why the hybrid C. sinensis and original C. clementina have similar types of NBS genes in this study. Furthermore, we found that sequence variation amongst Citrus NBS genes were shaped by multiple independent and shared accelerated mutation accumulation events among different groups of NBS genes and in different Citrus genomes. Our comparative analyses yield valuable insight into the structure, organization and evolution of NBS genes in Citrus genomes. Furthermore, our comprehensive analysis showed that the non-TIR NBS genes can be divided into two groups that come from different evolutionary origins. This provides new insights into non-TIR genes, which have not received much attention.

  19. Genome-wide comparative analysis reveals similar types of NBS genes in hybrid Citrus sinensis genome and original Citrus clementine genome and provides new insights into non-TIR NBS genes.

    Science.gov (United States)

    Wang, Yunsheng; Zhou, Lijuan; Li, Dazhi; Dai, Liangying; Lawton-Rauh, Amy; Srimani, Pradip K; Duan, Yongping; Luo, Feng

    2015-01-01

    In this study, we identified and compared nucleotide-binding site (NBS) domain-containing genes from three Citrus genomes (C. clementina, C. sinensis from USA and C. sinensis from China). Phylogenetic analysis of all Citrus NBS genes across these three genomes revealed that there are three approximately evenly numbered groups: one group contains the Toll-Interleukin receptor (TIR) domain and two different Non-TIR groups in which most of proteins contain the Coiled Coil (CC) domain. Motif analysis confirmed that the two groups of CC-containing NBS genes are from different evolutionary origins. We partitioned NBS genes into clades using NBS domain sequence distances and found most clades include NBS genes from all three Citrus genomes. This suggests that three Citrus genomes have similar numbers and types of NBS genes. We also mapped the re-sequenced reads of three pomelo and three mandarin genomes onto the C. sinensis genome. We found that most NBS genes of the hybrid C. sinensis genome have corresponding homologous genes in both pomelo and mandarin genomes. The homologous NBS genes in pomelo and mandarin suggest that the parental species of C. sinensis may contain similar types of NBS genes. This explains why the hybrid C. sinensis and original C. clementina have similar types of NBS genes in this study. Furthermore, we found that sequence variation amongst Citrus NBS genes were shaped by multiple independent and shared accelerated mutation accumulation events among different groups of NBS genes and in different Citrus genomes. Our comparative analyses yield valuable insight into the structure, organization and evolution of NBS genes in Citrus genomes. Furthermore, our comprehensive analysis showed that the non-TIR NBS genes can be divided into two groups that come from different evolutionary origins. This provides new insights into non-TIR genes, which have not received much attention.

  20. 固液火箭发动机试验瞬时燃速分析方法%Instantaneous Fuel Regression Rate Analysis of Hybrid Rocket Motor Experiment

    Institute of Scientific and Technical Information of China (English)

    李新田; 曾鹏; 田耀; 蔡国飙

    2012-01-01

    介绍了一种用于固液火箭发动机试验的瞬时燃速分析方法,运用该方法对H2O2/HTPB固液火箭发动机单室双推力长时间热试车试验进行燃速分析,拟合得到该工况下的燃速公式为r=1.847×10-2G0o.7304。根据燃速公式等计算结果对一次发动机试验进行了预估,计算得到的预估内弹道性能曲线与试验结果吻合较好,验证了该瞬时燃速分析方法的可行性,为发动机工作时间较长、氧化剂流率变化较大时的燃速分析提供了一种途径。%This paper proposes an instantaneous fuel regression rate analysis method for hybrid rocket motor experiment when the oxidizer mass flux changes large during a long working time. The method is applied on a single-chamber dual-thrust hybrid rocket long-time test with the hydrogen peroxide(H2O2) and hydroxyl-terminated polybutadiene(HTPB) propellant combination, and the fuel regression rate formula,r = 1. 847 × 10 2 Go ^0.7304 , is fitted based on the analysis results. According to the fitted fuel regression rate formula and calculation results, the prediction performances of a test are produced. The results show that the prediction interior ballistics performances fit well with the test curves, which validates the feasibility of the analy- sis method.

  1. Adsorption of arsenic and phosphate onto the surface of calcite as revealed by batch experiments and surface complexation modelling

    DEFF Research Database (Denmark)

    Sø, Helle Ugilt

    The adsorption of phosphate, arsenate (As(V)) and arsenite (As(III)) onto synthetic calcite was studied in a series of batch experiments. The adsorption of the three ions was studied separately followed by studies of the competition between arsenate and phosphate. The experimental data was utilized...... is complete after 1 and 2-3 hours, respectively). Also desorption is fast and complete for both ions within 0.5 h. The reversibility of the sorption process indicates that neither arsenate nor phosphate is readily incorporated into the calcite crystal lattice under our experimental conditions. The phosphate....... This clearly shows the importance of competition studies in validating multicomponent models. Extrapolation of the experimental results to calcite bearing aquifers suggests a large variability in the mobility of arsenic. Under reduced conditions, arsenite, which does not adsorb onto calcite, will dominate and...

  2. Climatic controls on leaf litter decomposition across European forests and grasslands revealed by reciprocal litter transplantation experiments

    DEFF Research Database (Denmark)

    Portillo-Estrada, Miguel; Pihlatie, Mari; Korhonen, Janne F. J.

    2016-01-01

    Carbon (C) and nitrogen (N) cycling under future climate change is associated with large uncertainties in litter decomposition and the turnover of soil C and N. In addition, future conditions (especially altered precipitation regimes and warming) are expected to result in changes in vegetation...... composition, and accordingly in litter species and chemical composition, but it is unclear how such changes could potentially alter litter decomposition. Litter transplantation experiments were carried out across six European sites (four forests and two grasslands) spanning a large geographical and climatic...... gradient (5.6-11.4 degrees C in annual temperature 511-878mm in precipitation) to gain insight into the climatic controls on litter decomposition as well as the effect of litter origin and species.The decomposition k rates were overall higher in warmer and wetter sites than in colder and drier sites...

  3. The stream of experience when watching artistic movies. Dynamic aesthetic effects revealed by the continuous evaluation procedure (CEP

    Directory of Open Access Journals (Sweden)

    Claudia eMuth

    2015-03-01

    Full Text Available Research in perception and appreciation is often focused on snapshots, stills of experience. Static approaches allow for multidimensional assessment, but are unable to catch the crucial dynamics of affective and perceptual processes; for instance, aesthetic phenomena such as the ‘Aesthetic-Aha’ (the increase in liking after the sudden detection of Gestalt, effects of expectation, or Berlyne’s idea that ‘disorientation’ with a ‘promise of success’ elicits interest. We conducted empirical studies on indeterminate artistic movies depicting the evolution and metamorphosis of Gestalt and investigated (i the effects of sudden perceptual insights on liking; that is, Aesthetic Aha-effects, (ii the dynamics of interest before moments of insight, and (iii the dynamics of complexity before and after moments of insight. Via the so-called Continuous Evaluation Procedure (CEP enabling analogous evaluation in a continuous way, participants assessed the material on two aesthetic dimensions blockwise either in a gallery or a laboratory. The material’s inherent dynamics were described via assessments of liking, interest, determinacy and surprise along with a computational analysis on the variable complexity. We identified moments of insight as peaks in determinacy and surprise. Statistically significant changes in liking and interest demonstrated that: (i insights increase liking, (ii interest already increases 1,500 ms before such moments of insight, supporting the idea that it is evoked by an expectation of understanding, and (iii insights occur during increasing complexity. We propose a preliminary model of dynamics in liking and interest with regard to complexity and perceptual insight and discuss descriptions of participants’ experiences of insight. Our results point to the importance of systematic analyses of dynamics in art perception and appreciation.

  4. Farmers' Preferences for PES Contracts to Adopt Silvopastoral Systems in Southern Ecuador, Revealed Through a Choice Experiment

    Science.gov (United States)

    Raes, Leander; Speelman, Stijn; Aguirre, Nikolay

    2017-08-01

    This study investigates farmers' preferences to participate in payment contracts to adopt silvopastoral systems in Ecuador. A choice experiment was used to elicit preferences between different contract attributes, including differing payment amounts and land management requirements. The research was carried out in the buffer zone of Podocarpus National Park in Southern Ecuador, an area where most land is dedicated to cattle husbandry. A choice experiment was conducted to measure farmers' interest in different types of contracts. Based on existing incentive programs, contract choices varied with respect to the type of silvopastoral system, extra land-use requirements, payment levels and contract duration. In addition, contracts differed with regards to access by cattle to streams. Although the farmers did not show strong preferences for every contract attribute, the majority of farmers in the area showed interest in the proposed contracts. A latent class model identified three classes of respondents, based on their preferences for different contracts attributes or the "business as usual" option. The results suggest that farmland area, agricultural income, and landowners' perceptions of environmental problems provide a partial explanation for the heterogeneity observed in the choices for specific contracts. Participation might increase if contracts were targeted at specific groups of farmers, such as those identified through our latent class model. Offering flexible contracts with varying additional requirements within the same scheme, involving farmers from the start in payments for environmental services design, and combining payments for environmental services with integrated conservation and development projects may be a better way to convince more farmers to adopt silvopastoral systems.

  5. Conformational properties of the disease-causing Z variant of α1-antitrypsin revealed by theory and experiment.

    Science.gov (United States)

    Kass, Itamar; Knaupp, Anja S; Bottomley, Stephen P; Buckle, Ashley M

    2012-06-20

    The human serine protease inhibitor (serpin) α-1 antitrypsin (α1-AT) protects tissues from proteases of inflammatory cells. The most common disease-causing mutation in α1-AT is the Z-mutation (E342K) that results in an increased propensity of α1-AT to polymerize in the ER of hepatocytes, leading to a lack of secretion into the circulation. The structural consequences of this mutation, however, remain elusive. We report a comparative molecular dynamics investigation of the native states of wild-type and Z α1-AT, revealing a striking contrast between their structures and dynamics in the breach region at the top of β-sheet A, which is closed in the wild-type simulations but open in the Z form. Our findings are consistent with experimental observations, notably the increased solvent exposure of buried residues in the breach region in Z, as well as polymerization via domain swapping, whereby the reactive center loop is rapidly inserted into an open A-sheet before proper folding of the C-terminal β-strands, allowing C-terminal domain swapping with a neighboring molecule. Taken together, our experimental and simulation data imply that mutations at residue 342 that either stabilize an open form of the top of β-sheet A or increase the local flexibility in this region, may favor polymerization and hence aggregation.

  6. Tertiary structure of human alpha1-acid glycoprotein (orosomucoid). Straightforward fluorescence experiments revealing the presence of a binding pocket.

    Science.gov (United States)

    Albani, Jihad R

    2004-02-25

    Binding of hemin to alpha1-acid glycoprotein has been investigated. Hemin binds to the hydrophobic pocket of hemoproteins. The fluorescent probe 2-(p-toluidino)-6-naphthalenesulfonate (TNS) binds to a hydrophobic domain in alpha1-acid glycoprotein with a dissociation constant equal to 60 microM. Addition of hemin to an alpha1-acid glycoprotein-TNS complex induces the displacement of TNS from its binding site. At saturation (1 hemin for 1 protein) all the TNS has been displaced from its binding site. The dissociation constant of hemin-alpha1-acid glycoprotein was found equal to 2 microM. Thus, TNS and hemin bind to the same hydrophobic site: the pocket of alpha1-acid glycoprotein. Energy-transfer studies performed between the Trp residues of alpha1-acid glycoprotein and hemin indicated that efficiency (E) of Trp fluorescence quenching was equal to 80% and the Förster distance, R0 at which the efficiency of energy transfer is 50% was calculated to be 26 A, revealing a very high energy transfer.

  7. Hybrid vehicles

    Energy Technology Data Exchange (ETDEWEB)

    West, J.G.W. [Electrical Machines (United Kingdom)

    1997-07-01

    The reasons for adopting hybrid vehicles result mainly from the lack of adequate range from electric vehicles at an acceptable cost. Hybrids can offer significant improvements in emissions and fuel economy. Series and parallel hybrids are compared. A combination of series and parallel operation would be the ideal. This can be obtained using a planetary gearbox as a power split device allowing a small generator to transfer power to the propulsion motor giving the effect of a CVT. It allows the engine to run at semi-constant speed giving better fuel economy and reduced emissions. Hybrid car developments are described that show the wide range of possible hybrid systems. (author)

  8. How to distinguish Hybrids from Radial Quarkonia

    CERN Document Server

    Close, Francis Edwin; Close, Frank E; Page, Philip R.

    1997-01-01

    We present arguments that reinforce the hybrid interpretation of pi(1800) and we establish that the rho(1450) and the omega(1420) can be interpreted as radial-hybrid mixtures. Some questions for future experiments are raised.

  9. Biological and climatic controls on leaf litter decomposition across European forests and grasslands revealed by reciprocal litter transplantation experiments

    Science.gov (United States)

    Portillo-Estrada, M.; Pihlatie, M.; Korhonen, J. F. J.; Levula, J.; Frumau, A. K. F.; Ibrom, A.; Lembrechts, J. J.; Morillas, L.; Horváth, L.; Jones, S. K.; Niinemets, Ü.

    2015-11-01

    Projection of carbon and nitrogen cycles to future climates is associated with large uncertainties, in particular due to uncertainties how changes in climate alter soil turnover, including litter decomposition. In addition, future conditions are expected to result in changes in vegetation composition, and accordingly in litter type and quality, but it is unclear how such changes could potentially alter litter decomposition. Litter transplantation experiments were carried out across 6 European sites (4 forest and 2 grasslands) spanning a large geographical and climatic gradient (5.6-11.4 °C in annual temperature 511-878 mm in precipitation) to gain insight into biological (litter origin and type, soil type) and climatic controls on litter decomposition. The decomposition k rates were overall higher in warmer and wetter sites than in colder and drier sites, and positively correlated to the litter total specific leaf area. Also, litter N content increased as less litter mass remained and decay went further. Surprisingly, this study demonstrates that climatic controls on litter decomposition are quantitatively more important than species, litter origin and soil type. Cumulative climatic variables, precipitation and air temperature (ignoring days with air temperatures below 0 °C), were appropriate to predict the litter remaining mass during decomposition (Mr). And Mr and cumulative air temperature were found to be the best predictors for litter carbon and nitrogen remaining during decomposition. We concluded with an equation for predicting the decomposition k rate by using mean annual air temperature and litter total specific leaf area.

  10. 3D Numerical Experiments of Lithospheric Transtension Reveal Complex Crustal-Scale Flow and Strain Partitioning in Transdomes

    Science.gov (United States)

    Rey, P. F.; Mondy, L. S.; Duclaux, G.; Teyssier, C. P.; Whitney, D. L.

    2015-12-01

    We have used Underworld to perform a series of numerical experiments involving a 256 x 256 x 128 km domain, at a grid resolution of 1.33 km. The kinematic boundary conditions simulate a lithospheric-scale pull-apart setting. We compare the structural and thermal evolution of a model involving a crust of thickness 40 km (TMoho=540ºC) with a model with a crust of thickness 60 km (TMoho=830ºC). We show that in the thick, hot crust model the flow in the pull-apart region is strongly partitioned between the strong upper crust and the weak lower crust. The weak, deep crust flows toward the pull-apart region to isostatically compensate the stretching and thinning of the upper crust. In contrast, the velocity field in the upper crust remains parallel to the imposed direction of extension. In the pull-apart region a transdome, made of two parallel foliation folds (or sub-domes), forms. In the dome, fabrics evolve from strong vertical flattening in between the two sub-domes, to shallow dipping constriction roughly parallel to the direction of extension in the upper part of the transdome.

  11. Cross-hole tracer experiment reveals rapid fluid flow and low effective porosity in the upper oceanic crust

    Science.gov (United States)

    Neira, N. M.; Clark, J. F.; Fisher, A. T.; Wheat, C. G.; Haymon, R. M.; Becker, K.

    2016-09-01

    Numerous field, laboratory, and modeling studies have explored the flows of fluid, heat, and solutes during seafloor hydrothermal circulation, but it has been challenging to determine transport rates and flow directions within natural systems. Here we present results from the first cross-hole tracer experiment in the upper oceanic crust, using four subseafloor borehole observatories equipped with autonomous samplers to track the transport of a dissolved tracer (sulfur hexafluoride, SF6) injected into a ridge-flank hydrothermal system. During the first three years after tracer injection, SF6 was transported both north and south through the basaltic aquifer. The observed tracer transport rate of ∼2-3 m/day is orders of magnitude greater than bulk rates of flow inferred from thermal and chemical observations and calculated with coupled fluid-heat flow simulations. Taken together, these results suggest that the effective porosity of the upper volcanic crust through which much tracer was transported is <1%, with fluid flowing rapidly along a few well-connected channels. This is consistent with the heterogeneous (layered, faulted, and/or fractured) nature of the volcanic upper oceanic crust.

  12. Females do it better. Individual recognition experiments reveal sexual dimorphism in Lemur catta (Linnaeus 1758) olfactory motivation and territorial defence.

    Science.gov (United States)

    Palagi, Elisabetta; Dapporto, Leonardo

    2007-08-01

    In this paper, we aim at demonstrating individual recognition of female genital marking in Lemur catta. By gas chromatography and behavioural trials we verified the occurrence of the three components of recognition systems. We showed that each female has a unique chemical signature (expression component), and males and females perceive female individuality (perception component). To verify the presence of the action component (the last component of recognition systems), we designed a bioassay based on territorial competition to verify the functional response to female odours. Only females identified other females on the basis of their scents. The lack of a territorial functional response by males to female secretions may not indicate a male inability to identify females by their scents. In fact, sexual dimorphism in motivation and territorial defence may explain the response by males in the functional experiment. Actually, game theory predicts that males defend their own territories more vigorously against males compared with females. Therefore, the result of individual recognition bioassays of female odours may open interesting scenarios in the evaluation of the territorial defence investment across the different sex combinations.

  13. Physiologically-Relevant Modes of Membrane Interactions by the Human Antimicrobial Peptide, LL-37, Revealed by SFG Experiments

    Science.gov (United States)

    Ding, Bei; Soblosky, Lauren; Nguyen, Khoi; Geng, Junqing; Yu, Xinglong; Ramamoorthy, Ayyalusamy; Chen, Zhan

    2013-05-01

    Antimicrobial peptides (AMPs) could become the next generation antibiotic compounds which can overcome bacterial resistance by disrupting cell membranes and it is essential to determine the factors underlying its mechanism of action. Although high-resolution NMR and other biological studies have provided valuable insights, it has been a major challenge to follow the AMP-membrane interactions at physiologically-relevant low peptide concentrations. In this study, we demonstrate a novel approach to overcome this major limitation by performing Sum Frequency Generation (SFG) vibrational spectroscopic experiments on lipid bilayers containing an AMP, LL-37. Our results demonstrate the power of SFG to study non-linear helical peptides and also infer that lipid-peptide interaction and the peptide orientation depend on the lipid membrane composition. The observed SFG signal changes capture the aggregating process of LL-37 on membrane. In addition, our SFG results on cholesterol-containing lipid bilayers indicate the inhibition effect of cholesterol on peptide-induced membrane permeation process.

  14. The presence of six cryptic species of the whitefly Bemisia tabaci complex in China as revealed by crossing experiments

    Institute of Scientific and Technical Information of China (English)

    Peng Wang; Di-Bing Sun; Bao-Li Qiu; Shu-Sheng Liu

    2011-01-01

    Recent phylogenetic analysis using mitochondrial cytochrome oxidase I(mtCOI)sequences of Bemisia tabaci worldwide indicates that the whitefly comprises at least 24 morphologically indistinguishable but genetically distinct cryptic species.While evidence of reproductive isolation has been reported for some of the putative species,more extensive crossing experiments are required to clarify the systematics of this species complex.In this study,we established laboratory cultures for six putative species of B.tabaci collected in China.We conducted 22 inter-species crosses among the six putative species.The data and those reported previously were collated,and the combined dataset covered all the 30 possible inter-species crosses among the six putative species.Intra-species controls always produced female and male progeny and the proportions of females in the first generation(F1)ranged from 56% to 70%.However,in inter-species crosses female progeny were rarely produced,and the few F1 females produced in four of the 30 inter-species crosses were either sterile or significantly weaker in viability.These results demonstrate a pattern of complete reproductive isolation among the six putative species and show that they are six cryptic species in the B.tabaci complex.

  15. Climatic controls on leaf litter decomposition across European forests and grasslands revealed by reciprocal litter transplantation experiments

    Science.gov (United States)

    Portillo-Estrada, Miguel; Pihlatie, Mari; Korhonen, Janne F. J.; Levula, Janne; Frumau, Arnoud K. F.; Ibrom, Andreas; Lembrechts, Jonas J.; Morillas, Lourdes; Horváth, László; Jones, Stephanie K.; Niinemets, Ülo

    2016-03-01

    Carbon (C) and nitrogen (N) cycling under future climate change is associated with large uncertainties in litter decomposition and the turnover of soil C and N. In addition, future conditions (especially altered precipitation regimes and warming) are expected to result in changes in vegetation composition, and accordingly in litter species and chemical composition, but it is unclear how such changes could potentially alter litter decomposition. Litter transplantation experiments were carried out across six European sites (four forests and two grasslands) spanning a large geographical and climatic gradient (5.6-11.4 °C in annual temperature 511-878 mm in precipitation) to gain insight into the climatic controls on litter decomposition as well as the effect of litter origin and species. The decomposition k rates were overall higher in warmer and wetter sites than in colder and drier sites, and positively correlated with the litter total specific leaf area. Also, litter N content increased as less litter mass remained and decay went further. Surprisingly, this study demonstrates that climatic controls on litter decomposition are quantitatively more important than species or site of origin. Cumulative climatic variables, precipitation, soil water content and air temperature (ignoring days with air temperatures below zero degrees Celsius), were appropriate to predict the litter remaining mass during decomposition (Mr). Mr and cumulative air temperature were found to be the best predictors for litter carbon and nitrogen remaining during the decomposition. Using mean annual air temperature, precipitation, soil water content and litter total specific leaf area as parameters we were able to predict the annual decomposition rate (k) accurately.

  16. Magmatic underplating and crustal growth in the Emeishan Large Igneous Province, SW China, revealed by a passive seismic experiment

    Science.gov (United States)

    Chen, Yun; Xu, Yigang; Xu, Tao; Si, Shaokun; Liang, Xiaofeng; Tian, Xiaobo; Deng, Yangfan; Chen, Lin; Wang, Peng; Xu, Yihe; Lan, Haiqiang; Xiao, Fuhui; Li, Wei; Zhang, Xi; Yuan, Xiaohui; Badal, José; Teng, Jiwen

    2015-12-01

    In an attempt to characterize the subsurface structure that is related to fossil mantle plume activity, a comprehensive geophysical investigation was conducted in the Emeishan Large Igneous Province (ELIP). The nature and geometry of the crust were examined within the scheme of the domal structure of ELIP, which comprises the Inner, Intermediate and Outer zones, which are defined on the basis of the biostratigraphy of pre-volcanic sediments. The bulk crustal properties within the Inner Zone are characterized by high density, high P-wave velocity, high Vp/Vs ratios and large crustal thickness. A visible continuous seismic converter is present in the upper part of the crust in the whole Intermediate Zone and the eastern part of the Inner Zone, but it is absent in the Inner Zone, where another seismic converter is observed in the lower part of the crust. The geometric configuration of these converters is attributable to the addition of mantle-derived melts to the pre-existing crust and subsequent interaction between them. The crustal geometry, which is delineated by the migrated image of receiver functions from the passive seismic experiment, and the crustal properties collectively suggest that a mafic layer of 15-20 km thickness and 150-180 km width exists at the base of the crust in the Inner Zone. Such a mafic layer reflects a vertical crustal growth through magmatic underplating at the base of the crust and intraplating within the upper crust. The salient spatial correlation between the deep crustal structure and the dome strongly supports a genetic link between crustal thickening and plume activity, if the pre-volcanic domal uplift is generated by the Permian Emeishan mantle plume. This arrangement is further supported by the consistency of the extent of crustal uplift estimated by isostatic equilibrium modeling and sedimentary data. This study therefore characterizes and provides evidence for a plume-modified crust in a large igneous province.

  17. The evolutionary analysis on complement genes reveals that fishes C3 and C9 experience different evolutionary patterns.

    Science.gov (United States)

    Wang, Shanchen; Wang, Rixin; Xu, Tianjun

    2013-12-01

    Complement is a humoral factor of innate immunity and plays an essential role in altering the host of the presence of potential pathogens and clearing of invading microorganisms. The third complement component (C3) not only is regarded as the crossing of the three pathways of complement activation, but also serves one of the bridges linking innate and acquired immunity. The nine complement component (C9) can combine with C5b, C6, C7 and C8 to form MAC which bounds to the surface of microorganisms to kill them. The evidence of evolution on C3 genes which have multiple functions and plays central role in innate immunity was documented in our previous study. Now we were interested in the evolution of C9 genes which were the terminal complement components. For these reasons, we want to explore the evolutionary patterns of C9 and whether C3 and C9 experience different evolutionary patterns. In our study, we used the sliding window method to separately calculate the values of ω among fishes and mammals of C3 and C9 codons. In order to detect the positive selection sites, we used the maximum likelihood (ML) method to study the evolutionary pattern on C3 and C9 genes. Positive selection sites were detected in mammalian C9 genes and no positive selection sites were detected in fishes C9 genes. However, no positive selection sites were detected in mammalian C3 genes and positive selection sites were detected in fishes C3 genes. The result indicated that C3 and C9 had different evolutionary patterns on mammals and fishes. In conclusion, different living environments lead to different evolutionary patterns on C3 and C9 in mammals and fishes. Besides, different complement components may have different evolutionary patterns on mammals and fishes.

  18. The preferential growth of branched GDGT source microorganisms under aerobic conditions in peat revealed by stable isotope probing experiments

    Science.gov (United States)

    Huguet, Arnaud; Meador, Travis B.; Laggoun-Défarge, Fatima; Könneke, Martin; Derenne, Sylvie; Hinrichs, Kai-Uwe

    2016-04-01

    , whereas corresponding rates in the anaerobic acrotelm incubations were more than an order of magnitude slower (acids approached or exceeded 1 μg cm-3 y-1 in both aerobic and anaerobic incubations, and were therefore much higher than those of brGDGTs. This suggests that the brGDGT producers are a minor constituent of the microbial community in Sphagnum-dominated peatlands or brGDGTs are a small component of the microbial cell membrane in comparison to fatty acids, despite the typically high brGDGT concentrations observed in peat. In conclusion, our results reveal that brGDGT source microorganisms preferentially grow under oxic to sub-oxic conditions, likely as facultative anaerobes. We show for the first time that these microorganisms are especially active at the peat surface, in contrast to the deeper layers, implying that the high abundance of brGDGTs observed in the catotlem should result from the accumulation of the brGDGTs actively produced in the acrotelm. Reference Weijers, J.W.H., Wiesenberg, G.L.B., Bol, R., Hopmans, E.C., Pancost, R.D., 2010. Biogeosciences 7, 2959-2973.

  19. Ants exhibit asymmetric hybridization in a mosaic hybrid zone.

    Science.gov (United States)

    Purcell, Jessica; Zahnd, Sacha; Athanasiades, Anouk; Türler, Rebecca; Chapuisat, Michel; Brelsford, Alan

    2016-10-01

    Research on hybridization between species provides unparalleled insights into the pre- and postzygotic isolating mechanisms that drive speciation. In social organisms, colony-level incompatibilities may provide additional reproductive barriers not present in solitary species, and hybrid zones offer an opportunity to identify these barriers. Here, we use genotyping-by-sequencing to sequence hundreds of markers in a hybrid zone between two socially polymorphic ant species, Formica selysi and Formica cinerea. We characterize the zone, determine the frequency of hybrid workers, infer whether hybrid queens or males are produced and investigate whether hybridization is influenced by colony social organization. We also compare cuticular hydrocarbon profiles and aggression levels between the two species. The hybrid zone exhibits a mosaic structure. The asymmetric distribution of hybrids skewed towards F. cinerea suggests a pattern of unidirectional nuclear gene flow from F. selysi into F. cinerea. The occurrence of backcrossed individuals indicates that hybrid queens and/or males are fertile, and the presence of the F. cinerea mitochondrial haplotype in 97% of hybrids shows that successful F1 hybrids will generally have F. cinerea mothers and F. selysi fathers. We found no evidence that social organization contributes to speciation, because hybrids occur in both single-queen and multiple-queen colonies. Strongly differentiated cuticular hydrocarbon profiles and heightened interspecific aggression further reveal that species recognition cues are both present and perceived. The discovery of fertile hybrids and asymmetrical gene flow is unusual in ants, and this hybrid zone will therefore provide an ideal system with which to investigate speciation in social insects.

  20. Hybrid Rocket Technology

    Directory of Open Access Journals (Sweden)

    Sankaran Venugopal

    2011-04-01

    Full Text Available With their unique operational characteristics, hybrid rockets can potentially provide safer, lower-cost avenues for spacecraft and missiles than the current solid propellant and liquid propellant systems. Classical hybrids can be throttled for thrust tailoring, perform in-flight motor shutdown and restart. In classical hybrids, the fuel is stored in the form of a solid grain, requiring only half the feed system hardware of liquid bipropellant engines. The commonly used fuels are benign, nontoxic, and not hazardous to store and transport. Solid fuel grains are not highly susceptible to cracks, imperfections, and environmental temperature and are therefore safer to manufacture, store, transport, and use for launch. The status of development based on the experience of the last few decades indicating the maturity of the hybrid rocket technology is given in brief.Defence Science Journal, 2011, 61(3, pp.193-200, DOI:http://dx.doi.org/10.14429/dsj.61.518

  1. High-resolution genome-wide array-based comparative genome hybridization reveals cryptic chromosome changes in AML and MDS cases with trisomy 8 as the sole cytogenetic aberration.

    Science.gov (United States)

    Paulsson, K; Heidenblad, M; Strömbeck, B; Staaf, J; Jönsson, G; Borg, A; Fioretos, T; Johansson, B

    2006-05-01

    Although trisomy 8 as the sole chromosome aberration is the most common numerical abnormality in acute myeloid leukemia (AML) and myelodysplastic syndromes (MDS), little is known about its pathogenetic effects. Considering that +8 is a frequent secondary change in AML/MDS, cryptic--possibly primary--genetic aberrations may occur in cases with trisomy 8 as the apparently single anomaly. However, no such hidden anomalies have been reported. We performed a high-resolution genome-wide array-based comparative genome hybridization (array CGH) analysis of 10 AML/MDS cases with isolated +8, utilizing a 32K bacterial artificial chromosome array set, providing >98% coverage of the genome with a resolution of 100 kb. Array CGH revealed intrachromosomal imbalances, not corresponding to known genomic copy number polymorphisms, in 4/10 cases, comprising nine duplications and hemizygous deletions ranging in size from 0.5 to 2.2 Mb. A 1.8 Mb deletion at 7p14.1, which had occurred prior to the +8, was identified in MDS transforming to AML. Furthermore, a deletion including ETV6 was present in one case. The remaining seven imbalances involved more than 40 genes. The present results show that cryptic genetic abnormalities are frequent in trisomy 8-positive AML/MDS cases and that +8 as the sole cytogenetic aberration is not always the primary genetic event.

  2. The learning curve in treating coronary chronic total occlusion early in the experience of an operator at a tertiary medical center: The role of the hybrid approach.

    Science.gov (United States)

    Shammas, Nicolas W; Shammas, Gail A; Robken, Jon; Harris, Thomas; Madison, Ashley; Dinklenburg, Catherine; Shammas, Andrew N; Harb, Christine; Jerin, Michael

    2016-01-01

    Treatment of chronic total occlusion (CTO) is complex and has a low adoption rate by interventional cardiologists. The introduction of the hybrid approach has provided a systematic step-by-step approach to treat complex CTO lesions with a high success rate. We describe the overall experience with the use of the hybrid approach of a non-CTO operator and analyze differences in the procedural and long term outcomes before and after the initial 30 cases performed. A total of 67 unselected, consecutive patients (68 lesions) underwent PCI of a CTO between January 2012 and June 2013 by a non-CTO operator. Patients were followed up for 1year using office and hospital medical records and death certificates. Cases were divided into the first consecutive 30 patients and compared to the subsequent 37 patients. The primary endpoint was acute procedural success defined as residual narrowing of ≤30% with no major adverse events. Secondary endpoints included the independent outcomes of death, major bleeding, perforations with cardiac tamponade, acute stent thrombosis (ST), target lesion revascularization (TLR) and target vessel revascularization (TVR). Descriptive analysis was performed on all variables. Univariate analysis was used to compare both groups. Baseline characteristics were as follows: mean age 63.9±10.6years, males 80.6%, diabetes 41.8%, de novo lesions 100%, ejection fraction 49.9±13.8%, CTO length 76.9±45.7mm, number of drug eluting stents per CTO 2.8±1.6 (median 3), contrast use 397±161.3ml, fluoroscopy time 51±32min and procedure time 134.3±74.7min. Lesions were crossed using an antegrade approach in 70.6% and a combined retrograde/antegrade approach in 29.4%. Crossing was intraluminal in 83.8% and subintimal in 16.2%. Acute procedural success was 95.5%. MAE included pericardial effusion with tamponade in 4.5%. On follow-up, TLR occurred in 6.6% of patients and TVR in 13.1%. There were no definite ST, one (1.6%) probable ST and one (1.6%) possible ST

  3. Improved performance of students instructed in a hybrid PBL format.

    Science.gov (United States)

    Lian, Jiqin; He, Fengtian

    2013-01-01

    As a result of enrollment expansion, increasing numbers of students are entering into medical school in China. This combined with a shortage of teachers, means that the learning environment typically consists of a large classroom setting with traditional lecture-based learning (LBL) as the major mode to teaching and learning. In this article, we investigate the preferences for hybrid problem-based learning (hybrid-PBL) or LBL in a large classroom setting. Two hundred five second-year undergraduate students in Third Military Medical University were randomly divided to two groups. The hybrid-PBL group contained 101 students and was taught by hybrid LBL (60%) and tutor-less PBL(40%) in a large classroom. The LBL group consisted of 104 students and was taught by LBL in a large classroom too. Post-teaching performance was assessed by multiple choice questions, short-essay questions, and case-analysis questions, while the students' teaching preferences and satisfaction were assessed by questionnaires. Analysis of the results of both groups in the examination of biochemistry revealed significantly higher scores on short-essay questions and case-analysis questions in the hybrid-PBL group. Students considered hybrid-PBL to be an effective learning method and favored it over the lecture format. Furthermore, students reported positive effects of hybrid-PBL in terms of additional learning resources, critical thinking, and fun learning experiences. These results suggest that hybrid-PBL is better than the traditional LBL method at improving students' basic knowledge and problem-solving skills. Students preferred hybrid-PBL and were satisfied with it. The tutor-less PBL pattern in a large classroom setting may be feasible in Chinese medical schools. Copyright © 2012 International Union of Biochemistry and Molecular Biology, Inc.

  4. Rapid hybridization of nucleic acids using isotachophoresis

    Science.gov (United States)

    Bercovici, Moran; Han, Crystal M.; Liao, Joseph C.; Santiago, Juan G.

    2012-01-01

    We use isotachophoresis (ITP) to control and increase the rate of nucleic acid hybridization reactions in free solution. We present a new physical model, validation experiments, and demonstrations of this assay. We studied the coupled physicochemical processes of preconcentration, mixing, and chemical reaction kinetics under ITP. Our experimentally validated model enables a closed form solution for ITP-aided reaction kinetics, and reveals a new characteristic time scale which correctly predicts order 10,000-fold speed-up of chemical reaction rate for order 100 pM reactants, and greater enhancement at lower concentrations. At 500 pM concentration, we measured a reaction time which is 14,000-fold lower than that predicted for standard second-order hybridization. The model and method are generally applicable to acceleration of reactions involving nucleic acids, and may be applicable to a wide range of reactions involving ionic reactants. PMID:22733732

  5. Seismic velocity structure and spatial distribution of reflection intensity off the Boso Peninsula, Central Japan, revealed by an ocean bottom seismographic experiment

    Science.gov (United States)

    Kono, Akihiro; Sato, Toshinori; Shinohara, Masanao; Mochizuki, Kimihiro; Yamada, Tomoaki; Uehira, Kenji; Shinbo, Takashi; Machida, Yuuya; Hino, Ryota; Azuma, Ryosuke

    2016-04-01

    Off the Boso Peninsula, central Japan, where the Sagami Trough is in the south and the Japan Trench is in the east, there is a triple junction where the Pacific plate (PAC), the Philippine Sea plate (PHS) and the Honshu island arc (HIA) meet each other. In this region, the PAC subducts beneath the PHS and the HIA, and the PHS subducts beneath the HIA. Due to the subduction of 2 oceanic plates, numerous seismic events took place in the past. In order to understand these events, it is important to image structure of these plates. Hence, many researchers attempted to reveal the substructure from natural earthquakes and seismic experiments. Because most of the seismometers are placed inland area and the regular seismicity off Boso is inactive, it is difficult to reveal the precise substructure off Boso area using only natural earthquakes. Although several marine seismic experiments using active sources were conducted, vast area remains unclear off Boso Peninsula. In order to improve the situation, a marine seismic experiment, using airgun as an active source, was conducted from 30th July to 4th of August, 2009. The survey line has 216 km length and 20 Ocean Bottom Seismometers (OBSs) were placed on it. We estimated 2-D P-wave velocity structure from the airgun data using the PMDM (Progressive Model Development Method; Sato and Kenett, 2000) and the FAST (First Arrival Seismic Tomography ; Zelt and Barton, 1998). Furthermore, we identified the probable reflection phases from the data and estimated the location of reflectors using Travel time mapping method (Fujie et al. 2006). We found some reflection phases from the data, and the reflectors are located near the region where P-wave velocity is 5.0 km/s. We interpret that the reflectors indicate the plate boundary between the PHS and the HIA. The variation of the intensity of reflection along the upper surface of PHS seems to be consistent with the result from previous reflection seismic experiment conducted by Kimura et

  6. THERMALLY CLEAVABLE HYBRID MATERIALS

    Directory of Open Access Journals (Sweden)

    Constantin Gaina

    2011-12-01

    Full Text Available Thermally cleavable hybrid materials were prepared by the Diels-Alder cycloaddition reaction of poly(vinyl furfural to N phenylmaleimido-N’-(triethoxysilylpropylurea followed by the sol-gel condensation reaction of trietoxysilyl groups with water and acetic acid. Thermal and dynamic mechanical analysis, dielectric and FTIR spectroscopy were used to characterize the structure and properties of the composites. The size of the inorganic silica particles in the hybrid material varied dependent on the silica content. The DSC study of the prepared materials revealed that the cleavage process of the formed cycloadducts takes place at temperatures varying between 143-165°C and is an endothermic process.

  7. A gene encoding a protein with a proline-rich domain (MtPPRD1), revealed by suppressive subtractive hybridization (SSH), is specifically expressed in the Medicago truncatula embryo axis during germination.

    Science.gov (United States)

    Bouton, Sophie; Viau, Laure; Lelièvre, Eric; Limami, Anis M

    2005-03-01

    A gene MtPPRD1, encoding a protein of 132 amino acids containing a proline-rich domain (PRD), has been revealed by suppressive subtractive hybridization (SSH) with two mRNA populations of embryo axes harvested immediately before and after radicle emergence. Although at the protein level MtPPRD1 showed low homology with plant lipid transfer proteins (LTPs), it did exhibit the eight cysteine residues conserved in all plant LTPs, a characteristic signature that allows the formation of a hydrophobic cavity adapted for loading hydrophobic molecules. Expression studies of MtPPRD1 have been carried out by quantitative real time RT-PCR throughout germination and post-germination processes in control seeds and seeds in which germination was delayed by abscisic acid (ABA) or the glutamine synthetase inhibitor methionine sulphoximine (MSX) treatments. The results showed that MtPPRD1 expression is developmentally regulated, induced in the embryo axis immediately before radicle emergence, reaches its maximum expression and declines during the early post-germination phase. Organ specificity studies showed that, except for a low and probably constitutive expression in roots, MtPPRD1 is specifically expressed in the embryo axis. Based on both experimental and in silico studies several putative roles are proposed for MtPPRD1 in Medicago truncatula, this protein can intervene (i) as an LTP in membrane biogenesis and regulation of the intracellular fatty acid pool by binding and transferring fatty acids and phospholipids between membranes, (ii) in the control of a developmental process specific to late germination and to early phases of post-germination, and (iii) and/or pathogen defence.

  8. Fluorescence In Situ Hybridization for MDM2 Amplification as a Routine Ancillary Diagnostic Tool for Suspected Well-Differentiated and Dedifferentiated Liposarcomas: Experience at a Tertiary Center

    Directory of Open Access Journals (Sweden)

    Khin Thway

    2015-01-01

    Full Text Available Background. The assessment of MDM2 gene amplification by fluorescence in situ hybridization (FISH has become a routine ancillary tool for diagnosing atypical lipomatous tumor (ALT/well-differentiated liposarcoma and dedifferentiated liposarcoma (WDL/DDL in specialist sarcoma units. We describe our experience of its utility at our tertiary institute. Methods. All routine histology samples in which MDM2 amplification was assessed with FISH over a 2-year period were included, and FISH results were correlated with clinical and histologic findings. Results. 365 samples from 347 patients had FISH for MDM2 gene amplification. 170 were positive (i.e., showed MDM2 gene amplification, 192 were negative, and 3 were technically unsatisfactory. There were 122 histologically benign cases showing a histology:FISH concordance rate of 92.6%, 142 WDL/DDL (concordance 96.5%, and 34 cases histologically equivocal for WDL (concordance 50%. Of 64 spindle cell/pleomorphic neoplasms (in which DDL was a differential diagnosis, 21.9% showed MDM2 amplification. Of the cases with discrepant histology and FISH, all but 3 had diagnoses amended following FISH results. For discrepancies of benign histology but positive FISH, lesions were on average larger, more frequently in “classical” (intra-abdominal or inguinal sites for WDL/DDL and more frequently core biopsies. Discrepancies of malignant histology but negative FISH were smaller, less frequently in “classical” sites but again more frequently core biopsies. Conclusions. FISH has a high correlation rate with histology for cases with firm histologic diagnoses of lipoma or WDL/DDL. It is a useful ancillary diagnostic tool in histologically equivocal cases, particularly in WDL lacking significant histologic atypia or DDL without corresponding WDL component, especially in larger tumors, those from intra-abdominal or inguinal sites or core biopsies. There is a significant group of well-differentiated adipocytic neoplasms

  9. An experiment on individual ‘parochial altruism’ revealing no connection between individual ‘altruism’ and individual ‘parochialism’

    Directory of Open Access Journals (Sweden)

    Shaun eHargreaves Heap

    2015-08-01

    Full Text Available Is parochial altruism an attribute of individual behaviour? This is the question we address with an experiment. We examine whether the individual pro-sociality that is revealed in the public goods and trust games when interacting with fellow group members helps predict individual parochialism, as measured by the in-group bias (i.e., the difference in these games in pro-sociality when interacting with own group members as compared with members of another group. We find that it is not. An examination of the Big 5 personality predictors of each behaviour reinforces this result: they are different. In short, knowing how ‘nice’ individuals are with respect to fellow group members does not help predict their parochialism.

  10. Cytogenetic analysis from DNA by comparative genomic hybridization.

    Science.gov (United States)

    Tachdjian, G; Aboura, A; Lapierre, J M; Viguié, F

    2000-01-01

    Comparative genomic hybridization (CGH) is a modified in situ hybridization technique which allows detection and mapping of DNA sequence copy differences between two genomes in a single experiment. In CGH analysis, two differentially labelled genomic DNA (study and reference) are co-hybridized to normal metaphase spreads. Chromosomal locations of copy number changes in the DNA segments of the study genome are revealed by a variable fluorescence intensity ratio along each target chromosome. Since its development, CGH has been applied mostly as a research tool in the field of cancer cytogenetics to identify genetic changes in many previously unknown regions. CGH may also have a role in clinical cytogenetics for detection and identification of unbalanced chromosomal abnormalities.

  11. Identification of hybrid node and link communities in complex networks

    Science.gov (United States)

    He, Dongxiao; Jin, Di; Chen, Zheng; Zhang, Weixiong

    2015-03-01

    Identifying communities in complex networks is an effective means for analyzing complex systems, with applications in diverse areas such as social science, engineering, biology and medicine. Finding communities of nodes and finding communities of links are two popular schemes for network analysis. These schemes, however, have inherent drawbacks and are inadequate to capture complex organizational structures in real networks. We introduce a new scheme and an effective approach for identifying complex mixture structures of node and link communities, called hybrid node-link communities. A central piece of our approach is a probabilistic model that accommodates node, link and hybrid node-link communities. Our extensive experiments on various real-world networks, including a large protein-protein interaction network and a large network of semantically associated words, illustrated that the scheme for hybrid communities is superior in revealing network characteristics. Moreover, the new approach outperformed the existing methods for finding node or link communities separately.

  12. Hybrid Metaheuristics

    CERN Document Server

    2013-01-01

    The main goal of this book is to provide a state of the art of hybrid metaheuristics. The book provides a complete background that enables readers to design and implement hybrid metaheuristics to solve complex optimization problems (continuous/discrete, mono-objective/multi-objective, optimization under uncertainty) in a diverse range of application domains. Readers learn to solve large scale problems quickly and efficiently combining metaheuristics with complementary metaheuristics, mathematical programming, constraint programming and machine learning. Numerous real-world examples of problems and solutions demonstrate how hybrid metaheuristics are applied in such fields as networks, logistics and transportation, bio-medical, engineering design, scheduling.

  13. Hybrid intermediaries

    OpenAIRE

    Cetorelli, Nicola

    2014-01-01

    I introduce the concept of hybrid intermediaries: financial conglomerates that control a multiplicity of entity types active in the "assembly line" process of modern financial intermediation, a system that has become known as shadow banking. The complex bank holding companies of today are the best example of hybrid intermediaries, but I argue that financial firms from the "nonbank" space can just as easily evolve into conglomerates with similar organizational structure, thus acquiring the cap...

  14. Hybrid composites

    CSIR Research Space (South Africa)

    Jacob John, Maya

    2009-04-01

    Full Text Available effect was observed for the elongation at break of the hybrid composites. The impact strength of the hybrid composites increased with the addition of glass fibres. The tensile and impact properties of thermoplastic natural rubber reinforced short... panels made from conventional structural materials. Figure 3 illustrates the performance of cellular biocomposite panels against conventional systems used for building and residential construction, namely a pre- cast pre-stressed hollow core concrete...

  15. Vivenciando com o filho uma passagem difícil e reveladora: a experiência da mãe acompanhante Experiencing a difficult and revealing passage with her child: the live-in mother experience

    Directory of Open Access Journals (Sweden)

    Irma de Oliveira

    2000-06-01

    Full Text Available O presente estudo foi realizado com mães acompanhantes em um hospital escola. Os objetivos foram: compreender as interações vivenciadas, identificar os significados que o familiar acompanhante atribui à experiência de vivenciar a hospitalização da criança, identificar o que essa vivência provoca na vida do familiar e construir um modelo teórico representativo da experiência. Utilizou-se como Referencial Teórico o Interacionismo Simbólico e Referencial Metodológico a "Grounded Theory". Identificou-se os fenômenos Indo em busca de solução e Atravessando uma situação difícil. A partir desses fenômenos emergiu a categoria central Vivenciando com o filho uma passagem difícil e reveladora.This study was conducted with live-in mother in university hospital. The objectives were as follows: to understand the experienced interactions, to identify the meanings that a family attribute to the experience of going through the child's hospitalization, to identify what the experience of hospitalization provokes in the family life and construct a model theory representative of the experience. Reference Theory the Symbolic Interactionism and Reference Methodology Grounded Theory had been utilized. From results appeared the phenomenon Going in search of solution, and Going through a difficult situation. Through these phenomena, the main category Experiencing a difficult and revealing passage with her child was identified.

  16. Detecting hybridization using ancient DNA.

    Science.gov (United States)

    Schaefer, Nathan K; Shapiro, Beth; Green, Richard E

    2016-06-01

    It is well established that related species hybridize and that this can have varied but significant effects on speciation and environmental adaptation. It should therefore come as no surprise that hybridization is not limited to species that are alive today. In the last several decades, advances in technologies for recovering and sequencing DNA from fossil remains have enabled the assembly of high-coverage genome sequences for a growing diversity of organisms, including many that are extinct. Thanks to the development of new statistical approaches for detecting and quantifying admixture from genomic data, genomes from extinct populations have proven useful both in revealing previously unknown hybridization events and informing the study of hybridization between living organisms. Here, we review some of the key recent statistical innovations for detecting ancient hybridization using genomewide sequence data and discuss how these innovations have revised our understanding of human evolutionary history.

  17. Experiences Using Hybrid MPI/OpenMP in the Real World: Parallelization of a 3D CFD Solver for Multi-Core Node Clusters

    Directory of Open Access Journals (Sweden)

    Gabriele Jost

    2010-01-01

    Full Text Available Today most systems in high-performance computing (HPC feature a hierarchical hardware design: shared-memory nodes with several multi-core CPUs are connected via a network infrastructure. When parallelizing an application for these architectures it seems natural to employ a hierarchical programming model such as combining MPI and OpenMP. Nevertheless, there is the general lore that pure MPI outperforms the hybrid MPI/OpenMP approach. In this paper, we describe the hybrid MPI/OpenMP parallelization of IR3D (Incompressible Realistic 3-D code, a full-scale real-world application, which simulates the environmental effects on the evolution of vortices trailing behind control surfaces of underwater vehicles. We discuss performance, scalability and limitations of the pure MPI version of the code on a variety of hardware platforms and show how the hybrid approach can help to overcome certain limitations.

  18. Rin4 causes hybrid necrosis and race-specific resistance in an interspecific lettuce hybrid.

    Science.gov (United States)

    Jeuken, Marieke J W; Zhang, Ningwen W; McHale, Leah K; Pelgrom, Koen; den Boer, Erik; Lindhout, Pim; Michelmore, Richard W; Visser, Richard G F; Niks, Rients E

    2009-10-01

    Some inter- and intraspecific crosses may result in reduced viability or sterility in the offspring, often due to genetic incompatibilities resulting from interactions between two or more loci. Hybrid necrosis is a postzygotic genetic incompatibility that is phenotypically manifested as necrotic lesions on the plant. We observed hybrid necrosis in interspecific lettuce (Lactuca sativa and Lactuca saligna) hybrids that correlated with resistance to downy mildew. Segregation analysis revealed a specific allelic combination at two interacting loci to be responsible. The allelic interaction had two consequences: (1) a quantitative temperature-dependent autoimmunity reaction leading to necrotic lesions, lethality, and quantitative resistance to an otherwise virulent race of Bremia lactucae; and (2) a qualitative temperature-independent race-specific resistance to an avirulent race of B. lactucae. We demonstrated by transient expression and silencing experiments that one of the two interacting genes was Rin4. In Arabidopsis thaliana, RIN4 is known to interact with multiple R gene products, and their interactions result in hypersensitive resistance to Pseudomonas syringae. Site-directed mutation studies on the necrosis-eliciting allele of Rin4 in lettuce showed that three residues were critical for hybrid necrosis.

  19. Tree-based intercropping systems increase growth and nutrient status of hybrid poplar: a case study from two Northeastern American experiments.

    Science.gov (United States)

    Rivest, David; Cogliastro, Alain; Olivier, Alain

    2009-01-01

    Tree-based intercropping is considered to be a potentially useful land use system for mitigating negative environmental impacts from intensive agriculture such as nutrient leaching and greenhouse gas emissions. Rapid early growth of trees is critical for rapidly accruing environmental benefits provided by the trees. We tested the hypothesis that intercropping increases the growth and nutrient status of young hybrid poplars (Populus spp.), compared to a harrowing alley treatment (i.e., no intercrop), in two experimental sites (St-Rémi and St-Edouard) in southern Québec, Canada. Three hybrid poplar clones (TD3230, Populus trichocarpa x deltoides; DN3308, P. deltoides x nigra; and NM3729, P. nigra x maximowiczii) were planted at St-Rémi. Clones DN3333 and DN3570 were planted at St-Edouard. At St-Rémi, intercropping comprised a 4-year succession of three crops of soybean (Glycine max (L.) Merr.) and barley (Hordeum vulgare L.). At St-Edouard, intercropping comprised a 3-year succession of buckwheat (Fagopyrum esculentum Moench), winter rye (Secale cereale L.), and winter wheat (Triticum aestivum L.). At St-Rémi, four years after treatment began, leafless aboveground biomass of hybrid poplars in the intercropping treatment was 37% higher compared to that in the harrowing treatment. At St-Edouard, after the third growing season, leafless aboveground biomass of hybrid poplars in the intercropping treatment was significantly higher by 40%. Vector analysis of foliar nutrient concentrations and comparison with critical concentration values showed that N (both sites) and K (St-Edouard) were the most limiting nutrients. Hybrid poplar clones responded similarly to treatments, with no consistent differences in tree growth observed between clones. We conclude that tree-based intercropping systems may offer an effective means of improving the early growth of hybrid poplars planted to provide both environmental services and high-value timber.

  20. A Tale of Two Sections: An Experiment to Compare the Effectiveness of a Hybrid versus a Traditional Lecture Format in Introductory Microbiology

    Science.gov (United States)

    Adams, Alison E. M.; Randall, Shelby; Traustadóttir, Tinna

    2015-01-01

    Two sections of an introductory microbiology course were taught by one instructor. One was taught through a hybrid format and the other through a traditional format. Students were randomly assigned to the two sections. Both sections were provided with identical lecture materials, in-class worksheets, in-class assessments, and extra credit…

  1. A Tale of Two Sections: An Experiment to Compare the Effectiveness of a Hybrid versus a Traditional Lecture Format in Introductory Microbiology

    Science.gov (United States)

    Adams, Alison E. M.; Randall, Shelby; Traustadóttir, Tinna

    2015-01-01

    Two sections of an introductory microbiology course were taught by one instructor. One was taught through a hybrid format and the other through a traditional format. Students were randomly assigned to the two sections. Both sections were provided with identical lecture materials, in-class worksheets, in-class assessments, and extra credit…

  2. An Exploratory Study of the Drivers of Student Satisfaction and Learning Experience in Hybrid-Online and Purely Online Marketing Courses

    Science.gov (United States)

    Estelami, Hooman

    2012-01-01

    Much of the existing research in distance education has focused on contrasting the outcomes between traditional face-to-face teaching and purely online courses, in which the entire course content is delivered online. However, research has not examined the effectiveness of hybrid-online courses, in which a combination of online delivery and…

  3. Synthesis and anticancer activity of novel curcumin-quinolone hybrids.

    Science.gov (United States)

    Raghavan, Saiharish; Manogaran, Prasath; Gadepalli Narasimha, Krishna Kumari; Kalpattu Kuppusami, Balasubramanian; Mariyappan, Palanivelu; Gopalakrishnan, Anjana; Venkatraman, Ganesh

    2015-09-01

    A number of new curcumin-quinolone hybrids were synthesised from differently substituted 3-formyl-2-quinolones and vanillin and their in vitro cytotoxicity was determined on a panel of representative cell lines (A549, MCF7, SKOV3 and H460) using MTT assay. The most potent compound 14, was analysed for its mode of action using various cell biology experiments. SKOV3 cells treated with compound 14 showed distorted cell morphology under phase contrast imaging and induction of apoptosis was confirmed by Annexin V/PE assay. Further experiments on generation of reactive oxygen species (ROS) and cell cycle analysis revealed that these hybrids induce apoptosis by ROS generation and arrest cell cycle progression in S and G2/M phase.

  4. Ion-atom hybrid systems

    CERN Document Server

    Willitsch, Stefan

    2014-01-01

    The study of interactions between simultaneously trapped cold ions and atoms has emerged as a new research direction in recent years. The development of ion-atom hybrid experiments has paved the way for investigating elastic, inelastic and reactive collisions between these species at very low temperatures, for exploring new cooling mechanisms of ions by atoms and for implementing new hybrid quantum systems. The present lecture reviews experimental methods, recent results and upcoming developments in this emerging field.

  5. Information component of hybrid war

    OpenAIRE

    Bohdanov, Aleksander

    2015-01-01

    A hybrid warfare in the three-dimensional coordinate system «Matter-Information-measure» is considering. In particular, the information component is highlighted and analyzed. The factors of preparation of information operations is defined, which are disclosed as an example of experience of volunteer group information warfare of Institute of special communication and information security of NTUU «KPI».Keywords: coordinate system «Matter-Information-Measure» hybrid warfare, information componen...

  6. Design Experience of Island Wind - photovoltaic Hybrid Power Supply System%海岛风光瓦补发电系统设计体会

    Institute of Scientific and Technical Information of China (English)

    郑永高

    2012-01-01

    简要介绍海岛建设风光互补发电系统的环境特点.结合工程实践归纳总结海岛风光互补发电系统设计要点.并就系统建设需要注意的问题进行解析。%The environmental features for the construction of wind - photovoltaic hybrid power supply system on the island is introduced briefly; in combination with the engineering practice, the keys points of design for the island wind - photovoltaic hybrid power supply system are summarized, and the issues worthy of attention during the system construction are analyzed.

  7. Analysis of nuclear and organellar DNA in somatic hybrids between solanaceous species.

    NARCIS (Netherlands)

    Wolters, A.M.A.

    1994-01-01

    This thesis describes an analysis of the possibilities and limitations of somatic hybridization of solanaceous species. Emphasis was laid on the elucidation of the interactions between nuclei, chloroplasts and mitochondria in the obtained somatic hybrids. Hybridization experiments between tomato ( L

  8. Optical properties of the organic-inorganic hybrid perovskite C H3N H3Pb I3 : Theory and experiment

    Science.gov (United States)

    Demchenko, D. O.; Izyumskaya, N.; Feneberg, M.; Avrutin, V.; Özgür, Ü.; Goldhahn, R.; Morkoç, H.

    2016-08-01

    We perform a theoretical and experimental study of the optical properties of a C H3N H3Pb I3 perovskite prepared by a vapor-assisted solution process, motivated in part by very high photovoltaic cell efficiencies. Several widespread theoretical approaches are used in an attempt to determine the most appropriate approach which would reproduce the experimental electronic structure and optical properties of the C H3N H3Pb I3 perovskite. We compare a semilocal approximation to the density functional theory with hybrid functionals and time-dependent hybrid functional calculations, evaluating the effects of exchange tuning and spin-orbit coupling. Using these methods we calculate the electronic structure, optical absorption spectrum, and frequency-dependent dielectric function of the C H3N H3Pb I3 perovskite. The results are compared to the experimentally obtained dielectric functions acquired from ellipsometry measurements. We demonstrate that inclusion of spin-orbit coupling in theoretical calculations is critical in describing the electronic and optical properties of the C H3N H3Pb I3 perovskite. Good agreement with experimental data is achieved when the optical spectra are computed using time-dependent hybrid density functional theory with spin-orbit coupling.

  9. [Hybridization of crucian carp, Carassius carassius (Linnaeus, 1758), in Ukrainian reservoirs and genetic structure of hybrids].

    Science.gov (United States)

    Mezhzheryn, S V; Kokodyĭĭ, S V; Kulysh, A V; Verlat'iĭĭ, D B; Fedorenko, L V

    2012-01-01

    Hybridization of crucian carps Carassius carassius in polyspecific crucian populations of reservoirs of Ukraine and genetic structure of the hybrids were investigated using biochemical gene marking and cytometric procedure. The fact of wide hybridization between C. auratus and C. carassius was proved to be true by large number of hybrids which can form populations consisting only from hybrid individuals. Hybrids C. auratus x C. carassius were diploid, tryploid and in exceptional cases tetraploid; females and males which most likely breed by hybridogenesis. Besides, some clonal hybrids C. carassius x C. gibelio-1 appearing as tetraploid females, and one triploid female C. carassius x Tinca tinca were revealed. It is supported that hybridization of alien C. auratus with endemic C. carassius became one of mechanisms of replacement and depressions of populations of the last.

  10. The hybrid BCI

    Directory of Open Access Journals (Sweden)

    Gert Pfurtscheller

    2010-04-01

    Full Text Available Nowadays, everybody knows what a hybrid car is. A hybrid car normally has 2 engines, its main purpose being to enhance energy efficiency and reduce CO2 output. Similarly, a typical hybrid brain-computer interface (BCI is also composed of 2 BCIs or at least one BCI and another system. Such a hybrid BCI, like any BCI, must fulfil the following four criteria: (i the device must rely on signals recorded directly from the brain; (ii there must be at least one recordable brain signal that the user can intentionally modulate to effect goal-directed behaviour; (iii real time processing; and (iv the user must obtain feedback. This paper introduces some hybrid BCIs which have already been published or are currently in development or validation, and some concepts for future work. The BCIs described classify 2 EEG patterns: One is the event-related (desynchronisation (ERD, ERS of sensorimotor rhythms, and the other is the steady-state visual evoked potential (SSVEP. The hybrid BCI can either have more than one input whereby the inputs are typically processed simultaneously or operate 2 systems sequentially, whereby the first system can act as a “brain switch”. In the case of self-paced operation of a SSVEP-based hand orthosis control with an motor imagery-based switch it was possible to reduce the rate of false positives during resting periods by about 50% compared to the SSVEP BCI alone. It is shown that such a brain switch can also rely on hemodynamic changes measured through near-infrared spectroscopy (NIRS. Another interesting approach is a hybrid BCI with simultaneous operations of ERD- and SSVEP-based BCIs. Here it is important to prove the existing promising offline simulation results with online experiments. Hybrid BCIs can also use one brain signal and another input. Such an additional input can be a physiological signal like the heart rate but also a signal from an external device like, an eye gaze control system.

  11. Biophysical and electrochemical properties of Self-assembled noncovalent SWNT/DNA hybrid and electroactive nanostructure

    Science.gov (United States)

    Mirzapoor, Aboulfazl; Ranjbar, Bijan

    2017-09-01

    DNA self-assembled hybrid nanostructures are widely used in recent research in nanobiotechnology. Combination of DNA with carbon based nanoparticles such as single-walled carbon nanotube (SWNT), multi-walled carbon nanotube (MWNT) and carbon quantum dot were applied in important biological applications. Many examples of biosensors, nanowires and nanoelectronic devices, nanomachine and drug delivery systems are fabricated by these hybrid nanostructures. In this study, a new hybrid nanostructure has been fabricated by noncovalent interactions between single or double stranded DNA and SWNT nanoparticles and biophysical properties of these structures were studied comparatively. Biophysical properties of hybrid nanostructures studied by circular dichroism, UV-vis and fluorescence spectroscopy techniques. Also, electrochemical properties studied by cyclic voltammetry, linear sweep voltammetry, square wave voltammetry, choronoamperometry and impedance spectroscopy (EIS). Results revealed that the biophysical and electrochemical properties of SWNT/DNA hybrid nanostructures were different compare to ss-DNA, ds-DNA and SWNT singly. Circular dichroism results showed that ss-DNA wrapped around the nanotubes through π-π stacking interactions. The results indicated that after adding SWNT to ss-DNA and ds-DNA intensity of CD and UV-vis spectrum peaks were decreased. Electrochemical experiments indicated that the modification of single-walled carbon nanotubes by ss-DNA improves the electron transfer rate of hybrid nanostructures. It was demonstrated SWNT/DNA hybrid nanostructures should be a good electroactive nanostructure that can be used for electrochemical detection or sensing.

  12. Assessing hybrid sterility in Oryza glaberrima x O. sativa hybrid progenies by PCR marker analysis and crossing with wide compatibility varieties.

    Science.gov (United States)

    Heuer, Sigrid; Miézan, Kouamé M

    2003-09-01

    Interspecific crossing of the African indigenous rice Oryza glaberrima with Oryza sativa cultivars is hindered by crossing barriers causing 100% spikelet sterility in F(1) hybrids. Since hybrids are partially female fertile, fertility can be restored by back crossing (BC) to a recurrent male parent. Distinct genetic models on spikelet sterility have been developed predicting, e.g., the existence of a gamete eliminator and/or a pollen killer. Linkage of sterility to the waxy starch synthase gene and the chromogen gene C, both located on chromosome 6, have been demonstrated. We selected a segregating BC(2)F(3) population of semi-sterile O. glaberrima x O. sativa indica hybrid progenies for analyses with PCR markers located at the respective chromosome-6 region. These analyses revealed that semi-sterile plants were heterozygous for a marker (OSR25) located in the waxy promoter, whereas fertile progenies were homozygous for the O. glaberrima allele. Adjacent markers showed no linkage to spikelet sterility. Semi-sterility of hybrid progenies was maintained at least until the F(4) progeny generation, suggesting the existence of a pollen killer in this plant material. Monitoring of reproductive plant development showed that spikelet sterility was at least partially due to an arrest of pollen development at the microspore stage. In order to address the question whether genes responsible for F(1) sterility in intraspecific hybrids ( O. sativa indica x japonica) also cause spikelet sterility in interspecific hybrids, crossings with wide compatibility varieties (WCV) were performed. WCV accessions possess "neutral" S-loci ( S(n)) improving fertility in intraspecific hybrids. This experiment showed that the tested S(n)-loci had no fertility restoring effect in F(1) interspecific hybrids. Pollen development was completely arrested at the microspore stage and grains were never obtained after selfing. This suggests that distinct or additional S-loci are responsible for sterility

  13. Hybrid Fuel Cell Technology Overview

    Energy Technology Data Exchange (ETDEWEB)

    None available

    2001-05-31

    For the purpose of this STI product and unless otherwise stated, hybrid fuel cell systems are power generation systems in which a high temperature fuel cell is combined with another power generating technology. The resulting system exhibits a synergism in which the combination performs with an efficiency far greater than can be provided by either system alone. Hybrid fuel cell designs under development include fuel cell with gas turbine, fuel cell with reciprocating (piston) engine, and designs that combine different fuel cell technologies. Hybrid systems have been extensively analyzed and studied over the past five years by the Department of Energy (DOE), industry, and others. These efforts have revealed that this combination is capable of providing remarkably high efficiencies. This attribute, combined with an inherent low level of pollutant emission, suggests that hybrid systems are likely to serve as the next generation of advanced power generation systems.

  14. Phoxonic Hybrid Superlattice.

    Science.gov (United States)

    Alonso-Redondo, Elena; Huesmann, Hannah; El Boudouti, El-Houssaine; Tremel, Wolfgang; Djafari-Rouhani, Bahram; Butt, Hans-Juergen; Fytas, George

    2015-06-17

    We studied experimentally and theoretically the direction-dependent elastic and electromagnetic wave propagation in a supported film of hybrid PMMA (poly[methyl-methacrylate])-TiO2 superlattice (SL). In the direction normal to the layers, this one-dimensional periodic structure opens propagation band gaps for both hypersonic (GHz) phonons and near-UV photons. The high mismatch of elastic and optical impedance results in a large dual phoxonic band gap. The presence of defects inherent to the spin-coating fabrication technique is sensitively manifested in the band gap region. Utilizing Brillouin light scattering, phonon propagation along the layers was observed to be distinctly different from propagation normal to them and can, under certain conditions (SL thickness and substrate elasticity), reveal the nanomechanical properties of the constituent layers. Besides the first realization of unidirectional phoxonic behavior, hybrid (soft-hard) periodic materials are a promising simple platform for opto-acoustic interactions and applications such as filters and Bragg mirrors.

  15. Influence of roots and mycorrhiza on the internal nitrogen cycle in an organic forest soil ­revealed by a 15N tracing experiment

    Science.gov (United States)

    Holz, M.; Rutting, T.; Klemedtsson, L.; Kuzyakov, Y.

    2014-12-01

    The cycle of nitrogen in soil is complex, consisting of many simultaneous occurring transformation processes. So far, microorganisms have been thought to govern N cycling in soil. Nevertheless, plant roots and their associated mycorrhizal symbionts may exert control on N turnover for example by input of labile C to soil. However, studies investigating the effect of roots on gross N turnover rates are scarce. We conducted a 15N tracer study under field conditions to reveal the effect of plants on soil N cycle. The experiment includes three treatments: (a) control, (b) excluding roots and (c) excluding roots + mycorrhiza. On the study site, exclusion of roots + mycorrhiza has previously been shown to increase N2O emissions which indicate that plants affect internal N cycling. 15NH4NO3 and NH415NO3 were given to the soil and traced for a period of 10 days. Gross N turnover rates were determined applying a numerical 15N tracing model. Results on N turnover rates showed that roots and their fungal symbionts increased N cycling probably by input of labile C to soil which may results in an activation of the microbial biomass. While gross N mineralization increased by 270 and 313 % compared to the treatment excluding roots + mycorrhiza, NH4+ immobilization increased by 402 and 489 %. Differences in ammonium and nitrate immobilization further indicated that ammonium was the preferred N source for roots and microorganisms. While ammonium availability decreased with trenching (0.59 compared to -0.47 and -0.96 μg N g-1 d-1), the opposite was true for nitrate (0.50 compared to 2.08 and 2.18 μg N g-1 d-1), explaining the increased N2O emissions which were likely caused by denitrification. Further, plants increased dissimilarity nitrate reduction to ammonium (DNRA) and affected autotrophic nitrification probably by the release of nitrification inhibitors and by influencing ammonium availability. We conclude that plants and their mycorrhizal symbionts actively control N cycling

  16. Mulheres idosas: desvelando suas vivências e necessidades de cuidado Mujeres ancianas: revelando sus experiencias y necesidades de cuidado Elderly women: revealing their experiences and care needs

    Directory of Open Access Journals (Sweden)

    Miriam Aparecida Barbosa Merighi

    2013-04-01

    estas mujeres.This qualitative study used a social phenomenology approach to elucidate the experiences, care needs and expectations of the elderly women. Nine elderly women were interviewed between February and May 2011 using a semi-structured questionnaire. The elderly women referred to their physical, mental, and social limitations. They valued ​​the preservation of their autonomy in daily activities and in self-care and considered their families to be a fundamental support. They had expectations of remaining healthy, pursuing leisure activities, and having improved access to healthcare information and treatment. The absence of prospects at this stage of life was related to the loss of significant people and the loss of health. The results of this study reveal important aspects of the experiences of elderly women and encourage further research and improvement in teaching, clinical practice and management policies in relation to the needs of these women.

  17. Hybrid microelectronic technology

    Science.gov (United States)

    Moran, P.

    Various areas of hybrid microelectronic technology are discussed. The topics addressed include: basic thick film processing, thick film pastes and substrates, add-on components and attachment methods, thin film processing, and design of thick film hybrid circuits. Also considered are: packaging hybrid circuits, automating the production of hybrid circuits, application of hybrid techniques, customer's view of hybrid technology, and quality control and assurance in hybrid circuit production.

  18. VISUALIZATION OF DYNAMIC ORGANIZATION OF CYTOSKELETON GELS IN LIVING CELLS BY HYBRID-SPM

    Institute of Scientific and Technical Information of China (English)

    K.Kawabata; Y.Sado; M.Nagayama; T.Nitta; K.Nemoto; Y.Koyama; H.Haga

    2003-01-01

    We succeeded in performing of hybrid Scanning Probe Microscopy (hybrid-SPM) in which mechanical-SPM and fluorescence microscopy are combined. This technique is able to measure simultaneously mechanical properties and distribution of cytoskeletons of living cells by using green fluorescent protein. We measured evolution of both local elasticity and distributions of actin stress fibers in an identical fibroblast living in physiological conditions. The SPM experiments revealed that stiffer lines develop in living cells, which correspond to actin stress fibers. The elasticity of the actin stress fibers is as high as 100 kPa. We discuss mechanical effects on the development of actin filament networks.

  19. Simultaneous assessment of cerebral blood volume and diffusion heterogeneity using hybrid IVIM and DK MR imaging: initial experience with brain tumors

    Energy Technology Data Exchange (ETDEWEB)

    Wu, Wen-Chau [National Taiwan University, Graduate Institute of Oncology, Taipei (China); National Taiwan University, Graduate Institute of Clinical Medicine, Taipei (China); National Taiwan University, Graduate Institute of Biomedical Electronics and Bioinformatics, Taipei (China); National Taiwan University Hospital, Department of Medical Imaging, Taipei (China); Yang, Shun-Chung; Chen, Ya-Fang; My, Pei-Chi [National Taiwan University Hospital, Department of Medical Imaging, Taipei (China); Tseng, Han-Min [National Taiwan University Hospital, Department of Neurology, Taipei (China)

    2017-01-15

    To investigate the feasibility of simultaneously assessing cerebral blood volume and diffusion heterogeneity using hybrid diffusion-kurtosis (DK) and intravoxel-incoherent-motion (IVIM) MR imaging. Fifteen healthy volunteers and 30 patients with histologically proven brain tumours (25 WHO grade II-IV gliomas and five metastases) were recruited. On a 3-T system, diffusion-weighted imaging was performed with six b-values ranging from 0 to 1,700 s/mm{sup 2}. Nonlinear least-squares fitting was employed to extract diffusion coefficient (D), diffusion kurtosis coefficient (K, a measure of the degree of non-Gaussian and heterogeneous diffusion) and intravascular volume fraction (f, a measure proportional to cerebral blood volume). Repeated-measures multivariate analysis of variance and receiver operating characteristic analysis were performed to assess the ability of D/K/f in differentiating contrast-enhanced tumour from peritumoral oedema and normal-appearing white matter. Based on our imaging setting (baseline signal-to-noise ratio = 32-128), coefficient of variation was 14-20 % for K, ∝6 % for D and 26-44 % for f. The indexes were able to differentiate contrast-enhanced tumour (Wilks' λ = 0.026, p < 10{sup -3}), and performance was greatest with K, followed by f and D. Hybrid DK IVIM imaging is capable of simultaneously measuring cerebral perfusion and diffusion indexes that together may improve brain tumour diagnosis. (orig.)

  20. The features of neutronic calculations for fast reactors with hybrid cores on the basis of BFS-62-3A critical assembly experiments

    Energy Technology Data Exchange (ETDEWEB)

    Mitenkova, E. F.; Novikov, N. V. [Nuclear Safety Inst. of Russian Academy of Sciences, B. Tulskaya 52, Moscow, 115119 (Russian Federation); Blokhin, A. I. [State Scientific Center of Russian Federation, Inst. of Physics and Power Engineering Named after A.I. Leypunsky, Bondarenko Square 1, Obninsk, Kaluga Region, 249030 (Russian Federation)

    2012-07-01

    The different (U-Pu) fuel compositions are considered for next generation of sodium fast breeder reactors. The considerable discrepancies in axial and radial neutron spectra for hybrid reactor systems compared to the cores with UO{sub 2} fuel cause increasing uncertainty of generating the group nuclear constants in those reactor systems. The calculation results of BFS-62-3A critical assembly which is considered as full-scale model of BN-600 hybrid core with steel reflector specify quite different spectra in local areas. For those systems the MCNP 5 calculations demonstrate significant sensitivity of effective multiplication factor K{sub eff} and spectral indices to nuclear data libraries. For {sup 235}U, {sup 238}U, {sup 239}Pu the results of calculated radial fission rate distributions against the reconstructed ones are analyzed. Comparative analysis of spectral indices, neutron spectra and radial fission rate distributions are performed using the different versions of ENDF/B, JENDL-3.3, JENDL-4, JEFF-3.1.1 libraries and BROND-3 for Fe, Cr isotopes. For analyzing the fission rate sensitivity to the plutonium presence in the fuel {sup 239}Pu is substituted for {sup 235}U (enrichment 90%) in the FA areas containing the plutonium. For {sup 235}U, {sup 238}U, {sup 239}Pu radial fission rate distributions the explanation of pick values discrepancies is based on the group fission constants analyses and possible underestimation of some features at the experimental data recovery method (Westcott factors, temperature dependence). (authors)

  1. Hybrid Simulation of Composite Structures

    DEFF Research Database (Denmark)

    Høgh, Jacob Herold

    Hybrid simulation is a substructural method combining a numerical simulation with a physical experiment. A structure is thereby simulated under the assumption that a substructure’s response is well known and easily modelled while a given substructure is studied more accurately in a physical...... of freedom. In this dissertation the main focus is to develop hybrid simulation for composite structures e.g. wind turbine blades where the boundary between the numerical model and the physical experiment is continues i.e. in principal infinite amount of degrees of freedom. This highly complicates...

  2. Genome-wide reprogramming in hybrids of somatic cells and embryonic stem cells.

    Science.gov (United States)

    Ambrosi, Dominic J; Tanasijevic, Borko; Kaur, Anupinder; Obergfell, Craig; O'Neill, Rachel J; Krueger, Winfried; Rasmussen, Theodore P

    2007-05-01

    Recent experiments demonstrate that somatic nuclei can be reprogrammed to a pluripotent state when fused to ESCs. The resulting hybrids are pluripotent as judged by developmental assays, but detailed analyses of the underlying molecular-genetic control of reprogrammed transcription in such hybrids are required to better understand fusion-mediated reprogramming. We produced hybrids of mouse ESCs and fibroblasts that, although nearly tetraploid, exhibit characteristics of normal ESCs, including apparent immortality in culture, ESC-like colony morphology, and pluripotency. Comprehensive analysis of the mouse embryonic fibroblast/ESC hybrid transcriptome revealed global patterns of gene expression reminiscent of ESCs. However, combined analysis of variance and hierarchical clustering analyses revealed at least seven distinct classes of differentially regulated genes in comparisons of hybrids, ESCs, and somatic cells. The largest class includes somatic genes that are silenced in hybrids and ESCs, but a smaller class includes genes that are expressed at nearly equivalent levels in hybrids and ESCs that contain many genes implicated in pluripotency and chromatin function. Reprogrammed genes are distributed throughout the genome. Reprogramming events include both transcriptional silencing and activation of genes residing on chromosomes of somatic origin. Somatic/ESC hybrid cell lines resemble their pre-fusion ESC partners in terms of behavior in culture and pluripotency. However, they contain unique expression profiles that are similar but not identical to normal ESCs. ESC fusion-mediated reprogramming provides a tractable system for the investigation of mechanisms of reprogramming. Disclosure of potential conflicts of interest is found at the end of this article.

  3. Initial real world experience with a novel insertable (Reveal LinQ(@Medtronic)) compared to the conventional (Reveal XT(@Medtronic)) implantable loop recorder at a tertiary care center - Points to ponder!

    Science.gov (United States)

    Gunda, Sampath; Reddy, Yeruva Madhu; Pillarisetti, Jayasree; Koripalli, Sandeep; Jeffery, Courtney; Swope, Jeanine; Atkins, Donita; Bommana, Sudharani; Emert, Martin P; Pimentel, Rhea; Dendi, Raghuveer; Berenbom, Loren D; DiBiase, Luigi; Natale, Andrea; Lakkireddy, Dhanunjaya

    2015-07-15

    Limited data is available regarding the novel Reveal LinQ (LinQ) which is a new generation implantable loop recorders (ILRs). We performed a prospective, observational study of all consecutive patients undergoing conventional (Reveal XT; XT) and LinQ devices at our institution between January 2012 and December 2014. A total of 217 patients underwent ILR implantation. XT was implanted in 105 and LinQ in 112 patients. There were no significant differences in baseline characteristics between the two groups. LinQ implantation using the manufacturer's technique termed, "manufacturer's method" group had significantly higher incidence of pocket infection compared to XT (6/50, 12% vs 3/105, 3%, p=0.032). With modifications to the LinQ implantation technique (using a conventional scalpel and placing a suture when needed to the incision) termed "modified method" group, the rate of infection has decreased significantly compared to "manufacturer's method group" (0/62, 0% vs 6/50, 12%, p=0.004) (Table 3). In multivariate regression analysis, the only independent predictors of infection were younger age (OR 0.95; p=0.04), insertion of LinQ device (OR 30.02; p=0.006) and procedure time (OR 1.07; p=0.03). In our single-center, prospective, observational study we found that with the current implantable techniques, the novel insertable LinQ device is associated with increased risk of complications. Copyright © 2015 Elsevier Ireland Ltd. All rights reserved.

  4. Hybrid ion, atom and light trap

    CERN Document Server

    Jyothi, S; Ram, N Bhargava; Rangwala, S A

    2013-01-01

    We present an unique experimental arrangement which permits the simultaneous trapping and cooling of ions and neutral atoms, within a Fabry-Perot (FP) cavity. The versatility of this hybrid trap experiment enables a variety of studies with trapped mixtures. The motivations behind the production of such a hybrid trap system are explained, followed by details of how the experiment is put together. Several experiments that have been performed with this system are presented and some opportunities with this system are discussed. However the primary emphasis is focussed on the aspects that pertain to the trapped ions, in this hybrid system.

  5. Hybrid Airy Plasmons with Dynamically Steerable Trajectories

    CERN Document Server

    Li, Rujiang; Lin, Xiao; Wang, Huaping; Xu, Zhiwei; Chen, Hongsheng

    2016-01-01

    With the intriguing properties of diffraction-free, self-accelerating, and self-healing, Airy plasmons are promising to be used in the trapping, transporting, and sorting of micro-objects, imaging, and chip scale signal processing. However, the high dissipative loss and the lack of dynamical steerability restrict the implementation of Airy plasmons in these applications. Here we reveal the hybrid Airy plasmons for the first time by taking a hybrid graphene-based plasmonic waveguide in the terahertz (THz) domain as an example. Due to the coupling between an optical mode and a plasmonic mode, the hybrid Airy plasmons can have large propagation lengths and effective transverse deflections, where the transverse waveguide confinements are governed by the hybrid modes with moderate quality factors. Meanwhile, the propagation trajectories of hybrid Airy plasmons are dynamically steerable by changing the chemical potential of graphene. These hybrid Airy plasmons may promote the further discovery of non-diffracting be...

  6. Hybrid Airy plasmons with dynamically steerable trajectories.

    Science.gov (United States)

    Li, Rujiang; Imran, Muhammad; Lin, Xiao; Wang, Huaping; Xu, Zhiwei; Chen, Hongsheng

    2017-01-26

    With their intriguing diffraction-free, self-accelerating, and self-healing properties, Airy plasmons show promise for use in the trapping, transporting, and sorting of micro-objects, imaging, and chip scale signal processing. However, high dissipative loss and lack of dynamical steerability restrict the implementation of Airy plasmons in these applications. Here we reveal hybrid Airy plasmons for the first time by taking a hybrid graphene-based plasmonic waveguide in the terahertz (THz) domain as an example. Due to coupling between optical modes and plasmonic modes, the hybrid Airy plasmons can have large propagation lengths and effective transverse deflections, where the transverse waveguide confinements are governed by the hybrid modes with moderate quality factors. Meanwhile, the propagation trajectories of the hybrid Airy plasmons are dynamically steerable by changing the chemical potential of graphene. These hybrid Airy plasmons may promote the further discovery of non-diffracting beams along with the emerging developments of optical tweezers and tractor beams.

  7. Hybrid Gear

    Science.gov (United States)

    Handschuh, Robert F. (Inventor); Roberts, Gary D. (Inventor)

    2016-01-01

    A hybrid gear consisting of metallic outer rim with gear teeth and metallic hub in combination with a composite lay up between the shaft interface (hub) and gear tooth rim is described. The composite lay-up lightens the gear member while having similar torque carrying capability and it attenuates the impact loading driven noise/vibration that is typical in gear systems. The gear has the same operational capability with respect to shaft speed, torque, and temperature as an all-metallic gear as used in aerospace gear design.

  8. Hybrid Qualifications

    DEFF Research Database (Denmark)

    has turned out as a major focus of European education and training policies and certainly is a crucial principle underlying the European Qualifications Framework (EQF). In this context, «hybrid qualifications» (HQ) may be seen as an interesting approach to tackle these challenges as they serve «two...... masters», i.e. by producing skills for the labour market and enabling individuals to progress more or less directly to higher education. The specific focus of this book is placed on conditions, structures and processes which help to combine VET with qualifications leading into higher education...

  9. Evaluating the Pedagogical Potential of Hybrid Models

    Science.gov (United States)

    Levin, Tzur; Levin, Ilya

    2013-01-01

    The paper examines how the use of hybrid models--that consist of the interacting continuous and discrete processes--may assist in teaching system thinking. We report an experiment in which undergraduate students were asked to choose between a hybrid and a continuous solution for a number of control problems. A correlation has been found between…

  10. Training Faculty to Teach in Hybrid Settings

    Science.gov (United States)

    Linder, Kathryn E.

    2017-01-01

    Based on the author's experiences developing and implementing a multi-week hybrid course design institute, this chapter outlines the components of training--both andragogical and technological--most helpful for faculty who are planning to teach a hybrid course.

  11. Titanium subhydride potassium perchlorate (TiH1.65/KClO4) burn rates from hybrid closed bomb-strand burner experiments.

    Energy Technology Data Exchange (ETDEWEB)

    Cooper, Marcia A. [Sandia National Lab. (SNL-NM), Albuquerque, NM (United States); Oliver, Michael S. [Sandia National Lab. (SNL-NM), Albuquerque, NM (United States)

    2012-08-01

    A hybrid closed bomb-strand burner is used to measure the burning behavior of the titanium subhydride potassium perchlorate pyrotechnic with an equivalent hydrogen concentration of 1.65. This experimental facility allows for simultaneous measurement of the closed bomb pressure rise and pyrotechnic burn rate as detected by electrical break wires over a range of pressures. Strands were formed by pressing the pyrotechnic powders to bulk densities between 60% and 90% theoretical maximum density. The burn rate dependance on initial density and vessel pressure are measured. At all initial strand densities, the burn is observed to transition from conductive to convective burning within the strand. The measured vessel pressure history is further analyzed following the closed bomb analysis methods developed for solid propellants.

  12. Experiments on Hybrid Precast Concrete Shear Walls Emulating Monolithic Construction with Different Amounts of Posttensioned Strands and Different Debond Lengths of Grouted Reinforcements

    Directory of Open Access Journals (Sweden)

    Zhangfeng Zhu

    2016-01-01

    Full Text Available This paper proposed a hybrid precast concrete shear wall emulating monolithic construction (HPWEM that utilized grouted vertical connecting reinforcements and unbonded posttensioned high-strength strands across the horizontal joint for the lateral resistance. The grouted reinforcements with predetermined debond length were used to provide strength by tension and energy dissipation by yielding. The posttensioned strands were mainly employed to offer the restoring force to reduce the residual displacement by elastic extension. The overlapping welded closed stirrups improved the confinement property of the restrained concrete, avoiding the brittle failure. Six HPWEM specimens, considering variables including the amounts of strands and the debond lengths of grouted reinforcements, as well as one referenced cast-in-place monolithic wall specimen, were tested under the low-cycle reversed lateral load. The HPWEM specimens were capable of providing strength, stiffness, ductility, and energy dissipation equivalent to that of the monolithic wall specimen under certain variable condition.

  13. The use of a new hybrid stentgraft for the repair of extensive thoracic aortic aneurysms with the frozen elephant trunk method - first Polish experiences.

    Science.gov (United States)

    Zembala, Michał; Krasoń, Marcin; Hrapkowicz, Tomasz; Przybylski, Roman; Filipiak, Krzysztof; Borowicz, Marcin; Niklewski, Tomasz; Głowacki, Jan; Wolny, Tomasz; Nadziakiewicz, Paweł; Walas, Ryszard; Zembala, Marian

    2014-09-01

    The frozen elephant trunk (FET) technique is a modification of the traditional elephant trunk method, which was introduced by Borst in 1983 in order to treat extensive thoracic aortic aneurysms. The crux of the new method is the different type of aortic prosthesis, consisting of a Dacron part (with or without branches leading to the arterial vessels which exit the aortic arch) and a port for extracorporeal circulation with a self-expanding nitinol stentgraft. This combination enables a complete one-stage treatment of the pathologies within the arch and the proximal segment of the descending aorta; moreover, it facilitates the performance of a two-stage hybrid treatment of extensive thoracic aortic aneurysms involving a significant part of the descending aorta. This article presents the cases of four patients with extensive aortic disease, who were implanted with Thoraflex prostheses (Vascutek, Scotland).

  14. The use of a new hybrid stentgraft for the repair of extensive thoracic aortic aneurysms with the frozen elephant trunk method – first Polish experiences

    Science.gov (United States)

    Krasoń, Marcin; Hrapkowicz, Tomasz; Przybylski, Roman; Filipiak, Krzysztof; Borowicz, Marcin; Niklewski, Tomasz; Głowacki, Jan; Wolny, Tomasz; Nadziakiewicz, Paweł; Walas, Ryszard; Zembala, Marian

    2014-01-01

    The frozen elephant trunk (FET) technique is a modification of the traditional elephant trunk method, which was introduced by Borst in 1983 in order to treat extensive thoracic aortic aneurysms. The crux of the new method is the different type of aortic prosthesis, consisting of a Dacron part (with or without branches leading to the arterial vessels which exit the aortic arch) and a port for extracorporeal circulation with a self-expanding nitinol stentgraft. This combination enables a complete one-stage treatment of the pathologies within the arch and the proximal segment of the descending aorta; moreover, it facilitates the performance of a two-stage hybrid treatment of extensive thoracic aortic aneurysms involving a significant part of the descending aorta. This article presents the cases of four patients with extensive aortic disease, who were implanted with Thoraflex prostheses (Vascutek, Scotland). PMID:26335241

  15. Clinical Experience with a Hybrid Procedure Using the Adherent Clot Catheter for Salvage of Thrombosed Hemodialysis Access: A Comparison with the Standard Fogarty Balloon Catheter.

    Science.gov (United States)

    Yang, Yu Sung; Han, Kyu Dam; Choi, Eun Hye; Park, Young Sam; Seo, Yeon Ho; Kim, Cheol Seung

    2015-03-01

    This study aimed to compare the efficacy of two different catheters in hybrid surgery for salvage of thrombosed hemodialysis accesses. The hybrid salvage procedure (surgical thrombectomy followed by endovascular angioplasty) of the thrombosed hemodialysis access, was performed using adherent clot (AC) catheter in 140 cases and Fogarty balloon catheter in 68 cases. Procedure-related outcomes such as the clot removal status, clinical success, complications, and primary patency rates were analyzed retrospectively. The proportion of cases with good clot removal scores in the AC catheter and Fogarty balloon catheter groups was 77.9% and 91.2%, respectively (P=0.018). Clinical success was achieved in 90.7% of the cases in the AC catheter group and in 98.5% of the cases in the balloon catheter group (P=0.035). The mean patency rates of the two groups were 50.7% and 63.2% at 3 months, 40.7% and 47.1% at 6 months, and 17.9% and 19.1% at 12 months. The complication rates (12.1% and 5.9%) and primary patency rates between the two catheters were not statistically different (P=0.328). On the analysis of the patency rate on access type of autologous (P=0.169) and prothetic graft (P=0.423), there was no significant difference between the two catheter groups. In terms of clot removal and clinical success, the AC catheter did not demonstrate better outcomes than the Fogarty balloon catheter. However, primary patency was not related to the type of catheter. Adherent clot catheter can be a useful alternative to Fogarty balloon catheter for thrombosed hemodialysis access.

  16. Quantitative genetic and translocation experiments reveal genotype-by-environment effects on juvenile life-history traits in two populations of Chinook salmon (Oncorhynchus tshawytscha)

    National Research Council Canada - National Science Library

    Evans, M L; Neff, B D; Heath, D D

    2010-01-01

    .... Here, we use the North Carolina II breeding design and translocation experiments between two populations of Chinook salmon to detail the genetic architecture and plasticity of offspring survival and growth...

  17. Development of a Hybrid Photopolymer for Stereolithography

    Institute of Scientific and Technical Information of China (English)

    2006-01-01

    New liquid free radical-cationic hybrid photopolymer, consisting of acrylate-based photocurable resin and epoxy-based photosensitive resin for stereolithography by UV laser was developed.The experiment results indicated that the hybrid photopolymer exhibits advantages of both the acrylate- based photosensitive resin and the epoxy- based photosensitive polymer contained in the hybrid system with relatively high photospeed and low linear shrinkage.Stereolithography parts without obvious distortion were built on the stereolithography apparatus HRPLAI from this hybrid resin successfully and efficiently.

  18. Intuitionistic hybrid logic

    DEFF Research Database (Denmark)

    Braüner, Torben

    2011-01-01

    Intuitionistic hybrid logic is hybrid modal logic over an intuitionistic logic basis instead of a classical logical basis. In this short paper we introduce intuitionistic hybrid logic and we give a survey of work in the area.......Intuitionistic hybrid logic is hybrid modal logic over an intuitionistic logic basis instead of a classical logical basis. In this short paper we introduce intuitionistic hybrid logic and we give a survey of work in the area....

  19. Continuity Controlled Hybrid Automata

    OpenAIRE

    Bergstra, J. A.; Middelburg, C.A.

    2004-01-01

    We investigate the connections between the process algebra for hybrid systems of Bergstra and Middelburg and the formalism of hybrid automata of Henzinger et al. We give interpretations of hybrid automata in the process algebra for hybrid systems and compare them with the standard interpretation of hybrid automata as timed transition systems. We also relate the synchronized product operator on hybrid automata to the parallel composition operator of the process algebra. It turns out that the f...

  20. Rin4 Causes Hybrid Necrosis and Race-Specific Resistance in an Interspecific Lettuce Hybrid[W

    Science.gov (United States)

    Jeuken, Marieke J.W.; Zhang, Ningwen W.; McHale, Leah K.; Pelgrom, Koen; den Boer, Erik; Lindhout, Pim; Michelmore, Richard W.; Visser, Richard G.F.; Niks, Rients E.

    2009-01-01

    Some inter- and intraspecific crosses may result in reduced viability or sterility in the offspring, often due to genetic incompatibilities resulting from interactions between two or more loci. Hybrid necrosis is a postzygotic genetic incompatibility that is phenotypically manifested as necrotic lesions on the plant. We observed hybrid necrosis in interspecific lettuce (Lactuca sativa and Lactuca saligna) hybrids that correlated with resistance to downy mildew. Segregation analysis revealed a specific allelic combination at two interacting loci to be responsible. The allelic interaction had two consequences: (1) a quantitative temperature-dependent autoimmunity reaction leading to necrotic lesions, lethality, and quantitative resistance to an otherwise virulent race of Bremia lactucae; and (2) a qualitative temperature-independent race-specific resistance to an avirulent race of B. lactucae. We demonstrated by transient expression and silencing experiments that one of the two interacting genes was Rin4. In Arabidopsis thaliana, RIN4 is known to interact with multiple R gene products, and their interactions result in hypersensitive resistance to Pseudomonas syringae. Site-directed mutation studies on the necrosis-eliciting allele of Rin4 in lettuce showed that three residues were critical for hybrid necrosis. PMID:19855048

  1. Combined spectral karyotyping, comparative genomic hybridization, and in vitro apoptyping of a panel of Burkitt's lymphoma-derived B cell lines reveals an unexpected complexity of chromosomal aberrations and a recurrence of specific abnormalities in chemoresistant cell lines

    National Research Council Canada - National Science Library

    Karpova, Maria B; Schoumans, Jacqueline; Blennow, Elisabeth; Ernberg, Ingemar; Henter, Jan-Inge; Smirnov, Aleksandr F; Nordenskjöld, Magnus; Fadeel, Bengt

    2006-01-01

    ...). Spectral karyotyping (SKY) revealed a large number of structural and numerical chromosomal aberrations, many of which had not been previously identified or resolved by conventional G-banding techniques...

  2. Closed-Flow Column Experiments - A Numerical Study on Breakthrough Oscillations Reveals a Decreased Uncertainty in the Inverse Determination of Transport Parameters

    Science.gov (United States)

    Ritschel, Thomas; Totsche, Kai Uwe

    2016-04-01

    The identification of transport parameters by inverse modeling often suffers from large uncertainties due to equifinality or parameter correlation when models are fitted to observations of the solute breakthrough in column outflow experiments. This issue can be approached by increasing the information potential of the observation, e.g. by running multiple experiments at different boundary conditions. A promising complementary approach of designing soil column experiments in order to further increase the obtained information is the closed-flow mode that is characterized by the recirculation of the effluent solution into the solution supply vessel. Depending on the experimental conditions, the solute concentration in the mixing vessel and the effluent follows a damped sinusoidal oscillation. As a result, the closed-flow experiment provides additional observables in the breakthrough curve, which are the initial exponential decrease in concentration in mixing vessel concentration, the oscillation wavelength and the extent of damping, each indicative for corresponding transport parameters. Furthermore, the concentration in the porous medium and the mixing vessel converges to equilibrium due to the closed loop. The evaluation of these emergent features allows intrinsic control over boundary conditions and impacts the uncertainty of parameters in inverse modeling. We present a comprehensive numerical sensitivity analysis to illustrate the potential application of closed-flow experiments. We can show that the sensitivity with respect to the apparent dispersion can be controlled by the experimenter leading to a decrease in parameter uncertainty as compared to classical experiments by an order of magnitude for optimal settings. With these finding we are also able to show a reduction of equifinality found for situations, where rate-limited interactions impede a proper determination of the apparent dispersion and rate coefficients. This renders the closed-flow mode a useful

  3. Reflections on Intellectual Hybridity

    Directory of Open Access Journals (Sweden)

    Kimala Price

    2012-05-01

    Full Text Available Drawing from the growing literature on interdisciplinarity and my own experiences as an intellectual hybrid, I discuss the personal and institutional challenges inherent in crossing disciplinary boundaries in the academy. I argue that boundary crossing is a natural occurrence and that the issue of (interdisciplinarity is a matter of degree and of determining who gets to define the boundaries. Defining boundaries is not merely an intellectual enterprise, but also a political act that delineates what is, or is not, legitimate scholarship. This issue is especially salient to women's and gender studies during times of economic distress and educational budget cuts.

  4. ``Hybrid'' multi-gap/single-gap Josephson junctions: Evidence of macroscopic quantum tunneling in superconducting-to-normal switching experiments on MgB2/I/Pb and MgB2/I/Sn junctions

    Science.gov (United States)

    Carabello, Steve; Lambert, Joseph; Dai, Wenqing; Li, Qi; Chen, Ke; Cunnane, Daniel; Xi, X. X.; Ramos, Roberto

    We report results of superconducting-to-normal switching experiments on MgB2/I/Pb and MgB2/I/Sn junctions, with and without microwaves. These results suggest that the switching behavior is dominated by quantum tunneling through the washboard potential barrier, rather than thermal excitations or electronic noise. Evidence includes a leveling in the standard deviation of the switching current distribution below a crossover temperature, a Lorentzian shape of the escape rate enhancement peak upon excitation by microwaves, and a narrowing in the histogram of escape counts in the presence of resonant microwave excitation relative to that in the absence of microwaves. These are the first such results reported in ``hybrid'' Josephson tunnel junctions, consisting of multi-gap and single-gap superconducting electrodes.

  5. PET/MRI: a novel hybrid imaging technique: major clinical indications and preliminary experience in Brazil; PET/RM: um novo metodo de imagem hibrida: principais indicacoes clinicas e experiencia preliminar no Brasil

    Energy Technology Data Exchange (ETDEWEB)

    Vitor, Taise; Martins, Karine Minaif; Ionescu, Tudor Mihai and others, E-mail: taisevitor@gmail.com [Hospital Israelita Albert Einstein, Sao Paulo, SP (Brazil)

    2017-04-01

    In recent years, medical imaging with hybrid techniques has widely accepted and employed in clinical routine. PET/MRI offers significant advantages, including excellent contrast and resolution and reduced ionizing radiation, as compared to well-established PET/ CT. Therefore, PET/MRI is a promising modality for oncologic imaging of some regions, such as brain, head and neck, liver and pelvis. This article set out to analyze clinical conditions that could benefit from PET/MRI imaging based on our caseload. The potential of PET/MRI to become the imaging modality of choice for assessment of neurologic and oncologic conditions associated with soft tissues is highlighted. Clinical aspects of PET/MRI and its application to clinical cases are illustrated with examples extracted from the authors' preliminary experience. (author)

  6. Cultivation Technology and Extension Experiences of Hybrid Millet in Ethiopia%杂交谷子在埃塞俄比亚的栽培技术及推广经验

    Institute of Scientific and Technical Information of China (English)

    刘建军; 赵治海

    2012-01-01

    总结了杂交谷子在埃塞俄比亚的栽培技术,介绍了杂交谷子在埃塞俄比亚的推广经验,指出了推广过程中存在的问题,并提出了相应的解决方法,可为杂交谷子在埃塞俄比亚及其他非洲国家的大面积推广种植提供借鉴。%The cult introduced, the pro extension in a large ivation technology of hybrid millet in Ethiopia is summarized, blems and the solution in the extension are pointed out, which area in Ethiopia and other Africa countries. the extension experiences are could provide references for the

  7. Polyionic hybrid nano-engineered systems comprising alginate and chitosan for antihypertensive therapeutics.

    Science.gov (United States)

    Niaz, Taskeen; Nasir, Habib; Shabbir, Saima; Rehman, Asma; Imran, Muhammad

    2016-10-01

    Hydrophobic nature of virtually all antihypertensive (AHT) drugs is the major hindrance towards their oral administration. Current study focuses on the development of polyionic hybrid nano drug delivery systems comprising sodium alginate and chitosan, loaded with distinct AHT drugs (captopril, amlodipine and valsartan). Encapsulation efficiency of hybrid NCS increased in the order of amlodipine>valsartan>captopril with average value of 42±0.9%, 91±1.5% and 96±1.9%, respectively. Scanning electron microscopy revealed hybrid NCS with smooth topography and round appearance in case of captopril. FTIR analysis confirmed the cross-linking between amino and carboxylate group of chitosan and alginate to form polyionic structures at nano-scale. Zeta-sizer experiments revealed that particle size distribution had increased from 197±12nm to 341±15nm for void and captopril loaded NCS. However, highly positive zeta potential of +32±1.6mV was not decreased significantly. In vitro sustained release assays reflected excellent retention of AHT drug in hybrid nanoparticles at 4°C and 37°C in physiological buffer, as less than 8% of the total drug was released in first 24h. Thus, carbohydrate-based hybrid NCS offering high loading capacity, stability and sustained release of hydrophobic drugs can be excellent alternative to current AHT therapeutics.

  8. A Prototype Experiment to Study Charmed Particle Production and Decay using a Holographic High Resolution Hydrogen Chamber (HOLEBC) and the European Hybrid Spectrometer

    CERN Multimedia

    2002-01-01

    The high resolution Hydrogen bubble chamber LEBC has already been used in experiments at the SPS to detect particles with lifetime @$>$ 5.10|-|1|3s (NA13 & NA16). For this experiment, a new version of LEBC called HOLEBC, has been constructed. This chamber and the NA26 version of the spectrometer have been used with classical optics in the NA27 experiment. A significant improvement in resolution was achieved (@= 20 microns compared with @= 40@mm in LEBC) and hence a good sensitivity all (known) charmed particle decays. The development of holographic recording techniques with HOLEBC is in progress. The prototype NA26 experiment is designed to evaluate the feasibility of the high sensitivity, high resolution holographic hydrogen bubble chamber technique and evaluate various possible charm selective triggers using the information from the spectrometer.

  9. Hybridized tetraquarks

    Directory of Open Access Journals (Sweden)

    A. Esposito

    2016-07-01

    Full Text Available We propose a new interpretation of the neutral and charged X,Z exotic hadron resonances. Hybridized-tetraquarks are neither purely compact tetraquark states nor bound or loosely bound molecules but rather a manifestation of the interplay between the two. While meson molecules need a negative or zero binding energy, its counterpart for h-tetraquarks is required to be positive. The formation mechanism of this new class of hadrons is inspired by that of Feshbach metastable states in atomic physics. The recent claim of an exotic resonance in the Bs0π± channel by the D0 Collaboration and the negative result presented subsequently by the LHCb Collaboration are understood in this scheme, together with a considerable portion of available data on X,Z particles. Considerations on a state with the same quantum numbers as the X(5568 are also made.

  10. Hybridized Tetraquarks

    CERN Document Server

    Esposito, A.; Polosa, A.D.

    2016-01-01

    We propose a new interpretation of the neutral and charged X, Z exotic hadron resonances. Hybridized-tetraquarks are neither purely compact tetraquark states nor bound or loosely bound molecules. The latter would require a negative or zero binding energy whose counterpart in h-tetraquarks is a positive quantity. The formation mechanism of this new class of hadrons is inspired by that of Feshbach metastable states in atomic physics. The recent claim of an exotic resonance in the Bs pi+- channel by the D0 collaboration and the negative result presented subsequently by the LHCb collaboration are understood in this scheme, together with a considerable portion of available data on X, Z particles. Considerations on a state with the same quantum numbers as the X(5568) are also made.

  11. Performance of the Tibet hybrid experiment (YAC-II + Tibet-III + MD) to measure the energy spectra of the light primary cosmic rays at energies 50-10,000 TeV

    Science.gov (United States)

    Huang, J.; Zhai, L. M.; Chen, D.; Shibata, M.; Katayose, Y.; Zhang, Ying; Liu, J. S.; Chen, Xu; Hu, X. B.; Zhang, X. Y.; Jia, H. Y.; Danzengluobu; Ohnishi, M.; Takita, M.

    2015-06-01

    A new hybrid detector system has been constructed by the Tibet ASγ collaboration at Tibet, China, since 2014 to measure the chemical composition of cosmic rays around the knee in the wide energy range. They consist of an air-shower-core detector-grid (YAC-II) to detect high energy electromagnetic component, the Tibet air-shower array (Tibet-III) and a large underground water-Cherenkov muon-detector array (MD). We have carried out a detailed air-shower Monte Carlo (MC) simulation to study the performance of the hybrid detectors by using CORSIKA (version 6.204), which includes QGSJET01c and SIBYLL2.1 hadronic interaction models. Assumed primary cosmic ray models are based on helium poor, helium rich and Gaisser's fit compositions around the knee. All detector responses are calculated using Geant4 (version 9.5) according to the real detector configurations and the MC events are reconstructed by the same procedure as the experimental data analysis. The energy determination is made by lateral density fitting (LDF) method using modified NKG function and the separation of the light components (proton, helium) is made by means of the artificial neural network (ANN) method and the random forest (RF) method. The systematic errors of the spectra of proton and helium caused by each steps of the analysis procedure are investigated including the dependence of the MC data on the hadronic interaction models and the primary composition models, and the algorithms for the primary mass identification. The systematic errors of the flux to be obtained by the new experiment are summarized as less than 30% in total. Our results show that the new hybrid experiment is powerful enough to study the chemical composition of the cosmic rays, in particular, to obtain the light-component spectra of the primary cosmic rays in 50-10,000 TeV energy range overlapping to the direct observation data at low energy side and ground-based indirect observations at high energy side. It is possible in this

  12. Ambiguity Revealed

    OpenAIRE

    Subir Bose; Matthew Polisson; Ludovic Renou

    2012-01-01

    We derive necessary and suffcient conditions for data sets composed of state-contingent prices and consumption to be consistent with two prominent models of decision making under ambiguity: variational preferences and smooth ambiguity. The revealed preference conditions for the maxmin expected utility and subjective expected utility models are characterized as special cases.

  13. An Improved Hybrid Method for Inverse Obstacle Scattering Problems

    Institute of Scientific and Technical Information of China (English)

    LIU JUAN; MA FU-MING

    2011-01-01

    An improved hybrid method is introduced in this paper as a numerical method to reconstruct the scatterer by far-field pattern for just one incident direction with unknown physical properties of the scatterer.The improved hybrid method inherits the idea of the hybrid method by Kress and Serranho which is a combination of Newton and decomposition method,and it improves the hybrid method by introducing a general boundary condition.The numerical experiments show the feasibility of this method.

  14. Multi-site production planning in hybrid make-to-stock/make-to-order production environment

    Science.gov (United States)

    Rafiei, Hamed; Rabbani, Masoud; Kokabi, Reza

    2014-06-01

    Today competitive environment has enforced practitioners and researchers to pay great attention to issues enhancing both production and marketing competitiveness. To do so, it has been obligatory for the firms to consider production side activities while customer requirements are on the other side of competition. In this regard, hybrid make-to-stock (MTS)/make-to-order (MTO) production systems have revealed outstanding results. This paper addresses multi-site production planning of a hybrid manufacturing firm for the first time in the hybrid systems' body of literature. In this regard, a network of suppliers, manufacturers and customers is considered for which a mixed-integer mathematical model is proposed. Objective function of the proposed mathematical model seeks to maximize profitability of the manufacturing firm. Because of computational complexity of the developed mathematical model, a genetic algorithm is developed upon which numerical experiments are reported in order to show validity and applicability of the proposed model.

  15. Phosphorous digestibility and activity of intestinal phytase in hybrid tilapia, Oreochromis niloticus X O. aureus

    Science.gov (United States)

    La Vorgna, M.W.; Hafez, Y.; Hughes, S.G.; Handwerker, T.

    2003-01-01

    Experiments were conducted to determine the degree to which phytate-bound phosphorus from plant protein sources could be used by hybrid tilapia (Oreochromis niloticus X O. aureus). Utilizing an inert marker technique with chromic oxide, hybrid tilapia in our study were effective at utilizing both inorganic and phytate phosphorus as evidenced by average apparent digestibility values of 93.2% and 90.0% for total and phytate phosphorus, respectively. Analysis of the intestinal brush border membrane of the tilapia revealed enzyme activity that was capable of hydrolyzing phytic acid. The presence of phytic acid hydrolyzing enzyme activity in the intestinal brush border provides a probable mechanism by which these hybrid tilapia are able to utilize phytate phosphorus effectively. ?? 2003 by The Haworth Press, Inc. All rights reserved.

  16. A Novel Three-Colour Fluorescence in Situ Hybridization Approach for the Detection of t(7;12)(q36;p13) in Acute Myeloid Leukaemia Reveals New Cryptic Three Way Translocation t(7;12;16)

    Energy Technology Data Exchange (ETDEWEB)

    Naiel, Abdulbasit [Leukaemia and Chromosome Research Laboratory, Division of Biosciences, Brunel University, London, Middlesex UB8 3PH (United Kingdom); Vetter, Michael [MetaSystems, Altlussheim 68804 (Germany); Plekhanova, Olga [Regional Children’s Hospital N 1, Ekaterinburg 620149 (Russian Federation); Fleischman, Elena; Sokova, Olga [N.N. Blokhin Russian Cancer Research Center Russian Academy of Medical Science, Moscow 115478 (Russian Federation); Tsaur, Grigory [Regional Children’s Hospital N 1, Ekaterinburg 620149 (Russian Federation); Research Institute of Medical Cell Technologies, Ekaterinburg 620149 (Russian Federation); Harbott, Jochen [Oncogenetic Laboratory, Department of Paediatric Haematology and Oncology, Justus Liebig University, Giessen 35392 (Germany); Tosi, Sabrina, E-mail: sabrina.tosi@brunel.ac.uk [Leukaemia and Chromosome Research Laboratory, Division of Biosciences, Brunel University, London, Middlesex UB8 3PH (United Kingdom)

    2013-03-11

    The t(7;12)(q36;p13) translocation is a recurrent chromosome abnormality that involves the ETV6 gene on chromosome 12 and has been identified in 20–30% of infant patients with acute myeloid leukaemia (AML). The detection of t(7;12) rearrangements relies on the use of fluorescence in situ hybridization (FISH) because this translocation is hardly visible by chromosome banding methods. Furthermore, a fusion transcript HLXB9-ETV6 is found in approximately 50% of t(7;12) cases, making the reverse transcription PCR approach not an ideal screening method. Considering the report of few cases of variant translocations harbouring a cryptic t(7;12) rearrangement, we believe that the actual incidence of this abnormality is higher than reported to date. The clinical outcome of t(7;12) patients is believed to be poor, therefore an early and accurate diagnosis is important in the clinical management and treatment. In this study, we have designed and tested a novel three-colour FISH approach that enabled us not only to confirm the presence of the t(7;12) in a number of patients studied previously, but also to identify a cryptic t(7;12) as part of a complex rearrangement. This new approach has proven to be an efficient and reliable method to be used in the diagnostic setting.

  17. Tapping to a slow tempo in the presence of simple and complex meters reveals experience-specific biases for processing music.

    Directory of Open Access Journals (Sweden)

    Sangeeta Ullal-Gupta

    Full Text Available Musical meters vary considerably across cultures, yet relatively little is known about how culture-specific experience influences metrical processing. In Experiment 1, we compared American and Indian listeners' synchronous tapping to slow sequences. Inter-tone intervals contained silence or to-be-ignored rhythms that were designed to induce a simple meter (familiar to Americans and Indians or a complex meter (familiar only to Indians. A subset of trials contained an abrupt switch from one rhythm to another to assess the disruptive effects of contradicting the initially implied meter. In the unfilled condition, both groups tapped earlier than the target and showed large tap-tone asynchronies (measured in relative phase. When inter-tone intervals were filled with simple-meter rhythms, American listeners tapped later than targets, but their asynchronies were smaller and declined more rapidly. Likewise, asynchronies rose sharply following a switch away from simple-meter but not from complex-meter rhythm. By contrast, Indian listeners performed similarly across all rhythm types, with asynchronies rapidly declining over the course of complex- and simple-meter trials. For these listeners, a switch from either simple or complex meter increased asynchronies. Experiment 2 tested American listeners but doubled the duration of the synchronization phase prior to (and after the switch. Here, compared with simple meters, complex-meter rhythms elicited larger asynchronies that declined at a slower rate, however, asynchronies increased after the switch for all conditions. Our results provide evidence that ease of meter processing depends to a great extent on the amount of experience with specific meters.

  18. Mathematics revealed

    CERN Document Server

    Berman, Elizabeth

    1979-01-01

    Mathematics Revealed focuses on the principles, processes, operations, and exercises in mathematics.The book first offers information on whole numbers, fractions, and decimals and percents. Discussions focus on measuring length, percent, decimals, numbers as products, addition and subtraction of fractions, mixed numbers and ratios, division of fractions, addition, subtraction, multiplication, and division. The text then examines positive and negative numbers and powers and computation. Topics include division and averages, multiplication, ratios, and measurements, scientific notation and estim

  19. Continuity Controlled Hybrid Automata

    NARCIS (Netherlands)

    Bergstra, J.A.; Middelburg, C.A.

    2004-01-01

    We investigate the connections between the process algebra for hybrid systems of Bergstra and Middelburg and the formalism of hybrid automata of Henzinger et al. We give interpretations of hybrid automata in the process algebra for hybrid systems and compare them with the standard interpretation of

  20. Continuity controlled Hybrid Automata

    NARCIS (Netherlands)

    Bergstra, J.A.; Middelburg, C.A.

    2008-01-01

    We investigate the connections between the process algebra for hybrid systems of Bergstra and Middelburg and the formalism of hybrid automata of Henzinger et al. We give interpretations of hybrid automata in the process algebra for hybrid systems and compare them with the standard interpretation of

  1. Improved performance of silicon nanowire/cadmium telluride quantum dots/organic hybrid solar cells

    Energy Technology Data Exchange (ETDEWEB)

    Ge, Zhaoyun [National Laboratory of Solid State Microstructures and School of Electronic Science and Engineering, Nanjing University, Nanjing 210093 (China); Jiangsu University of Science and Technology, Zhenjiang 212003, Jiangsu Province (China); Xu, Ling, E-mail: xuling@nju.edu.cn [National Laboratory of Solid State Microstructures and School of Electronic Science and Engineering, Nanjing University, Nanjing 210093 (China); Zhang, Renqi; Xue, Zhaoguo; Wang, Hongyu; Xu, Jun; Yu, Yao; Su, Weining; Ma, Zhongyuan; Chen, Kunji [National Laboratory of Solid State Microstructures and School of Electronic Science and Engineering, Nanjing University, Nanjing 210093 (China)

    2015-04-15

    Highlights: • We introduce an intermediate cadmium telluride quantum dots (CdTe QDs) layer between the organic with silicon nanowires of hybrid solar cells as a down-shifting layer. • The hybrid solar cell got the maximum short circuit current density of 33.5 mA/cm{sup 2}, getting an increase of 15.1% comparing to solar cell without CdTe QDs. • The PCE of the hybrid solar cells with CdTe QDs layer increases 28.8%. - Abstract: We fabricated silicon nanowire/cadmium telluride quantum dots (CdTe QDs)/organic hybrid solar cells and investigated their structure and electrical properties. Transmission electron microscope revealed that CdTe QDs were uniformly distributed on the surface of the silicon nanowires, which made PEDOT:PSS easily filled the space between SiNWs. The current density–voltage (J–V) characteristics of hybrid solar cells were investigated both in dark and under illumination. The result shows that the performance of the hybrid solar cells with CdTe QDs layer has an obvious improvement. The optimal short-circuit current density (J{sub sc}) of solar cells with CdTe QDs layer can reach 33.5 mA/cm{sup 2}. Compared with the solar cells without CdTe QDs, J{sub sc} has an increase of 15.1%. Power conversion efficiency of solar cells also increases by 28.8%. The enhanced performance of the hybrid solar cells with CdTe QDs layers are ascribed to down-shifting effect of CdTe QDs and the modification of the silicon nanowires surface with CdTe QDs. The result of our experiments suggests that hybrid solar cells with CdTe QDs modified are promising candidates for solar cell application.

  2. Molecular cloning and biochemical characterization of VIM-12, a novel hybrid VIM-1/VIM-2 metallo-beta-lactamase from a Klebsiella pneumoniae clinical isolate, reveal atypical substrate specificity.

    Science.gov (United States)

    Kontou, Maria; Pournaras, Spyros; Kristo, Ioulia; Ikonomidis, Alexandros; Maniatis, Antonios N; Stathopoulos, Constantinos

    2007-11-13

    Metallo-beta-lactamases (MBLs) are considered an emerging family of Zn2+-dependent enzymes that significantly contribute to the resistance of many nosocomial pathogens against beta-lactam antimicrobials. Since these plasmid-encoded enzymes constitute specific molecular targets for beta-lactams, their exact mode of action is greatly important in deploying efficient anti-infective treatments and for the control of severe multi-resistant nosocomial infections, which becomes a global problem. A novel hybrid VIM-1/VIM-2-type beta-lactamase (named VIM-12) has recently been identified in a clinical isolate of Klebsiella pneumoniae in Greece. The sequence of this enzyme is highly similar with that of VIM-1 at its N-terminal region and with that of VIM-2 at its C-terminal region, raising the question of whether this sequence similarity reflects also a similar functional role. Moreover, the possible contribution of this novel beta-lactamase to the overall antibiotic resistance of this specific clinical isolate was investigated. The gene encoding VIM-12 was cloned and expressed, and the recombinant enzyme was used for detailed kinetic analysis, using a variety of beta-lactam antibiotics. VIM-12 was found to exhibit narrow substrate specificity, compared to other known beta-lactamases, limited mainly to penicillin and to a much lesser extent to imipenen. Interestingly, meropenem was found to act as a noncompetitive inhibitor of the enzyme, although the active site of VIM-12 exhibited complete conservation of residues among VIM enzymes. We conclude that VIM-12 represents a novel and unique member of the family of known metallo-beta-lactamases, exhibiting atypical substrate specificity.

  3. Hybrid percolation transition in complex networks

    Science.gov (United States)

    Kahng, Byungnam

    Percolation has been one of the most applied statistical models. Percolation transition is one of the most robust continuous transitions known thus far. However, recent extensive researches reveal that it exhibits diverse types of phase transitions such as discontinuous and hybrid phase transitions. Here hybrid phase transition means the phase transition exhibiting natures of both continuous and discontinuous phase transitions simultaneously. Examples include k-core percolation, cascading failures in interdependent networks, synchronization, etc. Thus far, it is not manifest if the critical behavior of hybrid percolation transitions conforms to the conventional scaling laws of second-order phase transition. Here, we investigate the critical behaviors of hybrid percolation transitions in the cascading failure model in inter-dependent networks and the restricted Erdos-Renyi model. We find that the critical behaviors of the hybrid percolation transitions contain some features that cannot be described by the conventional theory of second-order percolation transitions.

  4. Genome-Wide Comparative Analysis Reveals Similar Types of NBS Genes in Hybrid Citrus sinensis Genome and Original Citrus clementine Genome and Provides New Insights into Non-TIR NBS Genes

    OpenAIRE

    Yunsheng Wang; Lijuan Zhou; Dazhi Li; Liangying Dai; Amy Lawton-Rauh; Pradip K. Srimani; Yongping Duan; Feng Luo

    2015-01-01

    In this study, we identified and compared nucleotide-binding site (NBS) domain-containing genes from three Citrus genomes (C. clementina, C. sinensis from USA and C. sinensis from China). Phylogenetic analysis of all Citrus NBS genes across these three genomes revealed that there are three approximately evenly numbered groups: one group contains the Toll-Interleukin receptor (TIR) domain and two different Non-TIR groups in which most of proteins contain the Coiled Coil (CC) domain. Motif anal...

  5. REVEALED ALTRUISM

    OpenAIRE

    Cox, James C; Friedman, Daniel; Sadiraj, Vjollca

    2009-01-01

    This pap er develops a theory of revealed preferences over oneís own and othersímonetary payo§s. We intro duce ìmore altruistic thanî(MAT), a partial ordering over preferences, and interpret it with known parametric mo dels. We also intro duce and illustrate ìmore generous thanî (MGT), a partial ordering over opp ortunity sets. Several recent discussions of altruism fo cus on two player extensive form games of complete information in which the Örst mover (FM) cho oses a more or less gen...

  6. Aspirin revealed

    Science.gov (United States)

    Lacey, D.; Hu, X. K.; Loboda, A. V.; Mosey, N. J.; Lipson, R. H.

    2007-03-01

    Experiments are described where the experimental conditions have been optimized to detect aspirin by MALDI mass spectrometry. Although protonated aspirin was not observed by MALDI, sodium and potassium aspirin adducts could be found. Significantly better signals could be obtained by using Rb and Cs salts as cationization sources. Quantum calculations were carried out to determine the structure and energetics of the Li, K, Rb, and Cs alkali--aspirin adducts.

  7. New inroads on the Physics of Upper Hybrid Turbulence

    Science.gov (United States)

    Papadopoulos, Konstantinos Dennis; Najmi, Amir; Eliasson, Bengt

    2016-07-01

    The physics associated with excitation of Upper Hybrid (UH) turbulence, including the observed high and low frequency wave spectra and the resultant plasma heating and acceleration is still covered with many puzzles that have yet to be understood within the context of traditional theories. A set of new computer simulations using a Vlasov code revealed several critical plasma wave features associated with driving waves in the upper hybrid resonance. In addition to the well-known excitation of a lower hybrid wave and an upper hybrid sideband shifted by the Lower Hybrid (LH) frequency usually seen in Stimulated Electromagnetic Emission (SEE) observations in ionospheric HF heating experiments the following major features were apparent: 1. Broadening of the wavenumber spectral region at the at the UH frequency 2. Excitation of all Bernstein modes associated with cyclotron frequency harmonics both below and above the UH frequency 3. The electron heating, in the form of bulk heating (close to a Dryvestein distribution) is due to a part of the wave-number spectrum associated with the first Bernstein mode, although its wave intensity is more than 20 dB lower than the intensity of the UH branch 4. An exception to the previous feature occurs when the UH frequency is close to an harmonic of the electron cyclotron frequency (ω_{UH} ≈ n Ω_e), when the first UH lower sideband equals a multiple of the cyclotron frequency (ω_{UH} - ω_{LH} ≈ n Ω_e). In this case the electron heating is due the downshifted UH waves, it is much stronger than in the non-resonant case and it is in the form of the high-energy tail. The implications of the new theory of the UH turbulence in the interpretation of observations in space plasmas and wave particle interactions will be discussed. Acknowledgment: The authors acknowledge discussions with their colleagues G. Milikh, S. Surma, Xi Shao and R. Sagdeev. Work supported by AFOSR MURI grant FA95501410019.

  8. Somatic hybridization in higher plants.

    Science.gov (United States)

    Constabel, F

    1976-11-01

    Somatic hybridization in higher plants has come into focus since methods have been established for protoplast fusion and uptake of foreign DNA and organelles by protoplasts. Polyethylene glycol (PEG) was an effective agent for inducing fusion. Treatment of protoplasts with PEG resulted in 5 to 30% heterospecific fusion products. Protoplasts of different species, genera and even families were compatible when fused. A number of protoplast combinations (soybean + corn, soybean + pea, soybean + tobacco, carrot + barley, etc.) provided fusion products which underwent cell division and callus formation. Fusion products initially were heterokaryocytes. In dividing heterokaryocytes, random distribution of mitotic nuclei was observed to be accompanied by multiple wall formation and to result in chimeral callus. Juxtaposition of mitotic nuclei suggested nuclear fusion and hybrid formation. Fusion of heterospecific interphase nuclei was demonstrated in soybean + pea and carrot + barley heterokaryons. Provided parental protoplasts carry suitable markers, the fusion products can be recognized. For the isolation and cloning of hybrid cells, fusion experiments must be supplemented with a selective system. Complementation of two non-allelic genes that prevent or inhibit growth under special culture conditions appears as the principle on which to base the selection of somatic hybrids. As protoplasts of some species have been induced to regenerate entire plants, the development of hybrid plants from protoplast fusion products is feasible and has already been demonstrated for tobacco.

  9. Kinetics of the addition of olefins to Si-centered radicals: the critical role of dispersion interactions revealed by theory and experiment.

    Science.gov (United States)

    Johnson, Erin R; Clarkin, Owen J; Dale, Stephen G; DiLabio, Gino A

    2015-06-04

    Solution-phase rate constants for the addition of selected olefins to the triethylsilyl and tris(trimethylsilyl)silyl radicals are measured using laser-flash photolysis and competition kinetics. The results are compared with predictions from density functional theory (DFT) calculations, both with and without dispersion corrections obtained from the exchange-hole dipole moment (XDM) model. Without a dispersion correction, the rate constants are consistently underestimated; the errors increase with system size, up to 10(6) s(-1) for the largest system considered. Dispersion interactions preferentially stabilize the transition states relative to the separated reactants and bring the DFT-calculated rate constants into excellent agreement with experiment. Thus, dispersion interactions are found to play a key role in determining the kinetics for addition reactions, particularly those involving sterically bulky functional groups.

  10. Sub-megabase resolution tiling (SMRT array-based comparative genomic hybridization profiling reveals novel gains and losses of chromosomal regions in Hodgkin Lymphoma and Anaplastic Large Cell Lymphoma cell lines

    Directory of Open Access Journals (Sweden)

    Lam Wan L

    2008-01-01

    Full Text Available Abstract Background Hodgkin lymphoma (HL and Anaplastic Large Cell Lymphoma (ALCL, are forms of malignant lymphoma defined by unique morphologic, immunophenotypic, genotypic, and clinical characteristics, but both overexpress CD30. We used sub-megabase resolution tiling (SMRT array-based comparative genomic hybridization to screen HL-derived cell lines (KMH2 and L428 and ALCL cell lines (DEL and SR-786 in order to identify disease-associated gene copy number gains and losses. Results Significant copy number gains and losses were observed on several chromosomes in all four cell lines. Assessment of copy number alterations with 26,819 DNA segments identified an average of 20 genetic alterations. Of the recurrent minimally altered regions identified, 11 (55% were within previously published regions of chromosomal alterations in HL and ALCL cell lines while 9 (45% were novel alterations not previously reported. HL cell lines L428 and KMH2 shared gains in chromosome cytobands 2q23.1-q24.2, 7q32.2-q36.3, 9p21.3-p13.3, 12q13.13-q14.1, and losses in 13q12.13-q12.3, and 18q21.32-q23. ALCL cell lines SR-786 and DEL, showed gains in cytobands 5p15.32-p14.3, 20p12.3-q13.11, and 20q13.2-q13.32. Both pairs of HL and ALCL cell lines showed losses in 18q21.32-18q23. Conclusion This study is considered to be the first one describing HL and ALCL cell line genomes at sub-megabase resolution. This high-resolution analysis allowed us to propose novel candidate target genes that could potentially contribute to the pathogenesis of HL and ALCL. FISH was used to confirm the amplification of all three isoforms of the trypsin gene (PRSS1/PRSS2/PRSS3 in KMH2 and L428 (HL and DEL (ALCL cell lines. These are novel findings that have not been previously reported in the lymphoma literature, and opens up an entirely new area of research that has not been previously associated with lymphoma biology. The findings raise interesting possibilities about the role of signaling

  11. Arc visualization of odor objects reveals experience-dependent ensemble sharpening, separation, and merging in anterior piriform cortex in adult rat.

    Science.gov (United States)

    Shakhawat, Amin Md; Harley, Carolyn W; Yuan, Qi

    2014-07-30

    Visualization using the immediate early gene Arc revealed sparser and more robust odor representations in the anterior piriform cortex of adult rats when odor was associated with water reward over 2-3 d. Rewarded odor "mixtures" resulted in rats responding to either component odor similarly, and, correspondingly, the odor representations became more similar as indexed by increased overlap in piriform Arc-expressing (Arc(+)) pyramidal neurons. The increased overlap was consistent with the rats' generalization from component odors. Discriminating among highly similar odor mixtures for reward led to increased differentiation of the neural representations as indexed by a reduction in overlap for piriform Arc(+) pyramidal neurons after training. Similar odor mixture discrimination also required more trials to criterion. The visible reduction in the overlap of odor representations indexes pattern separation. The Arc visualization of odor representations in the anterior piriform network suggests that odor objects are widely distributed representations and can be rapidly modified by reward training in adult rats. We suggest that dynamic changes such as those observed here in piriform odor encoding are at the heart of perceptual learning and reflect the continuing plastic nature of mature associative cortex as an outcome of successful problem solving.

  12. Revealing Hearts

    DEFF Research Database (Denmark)

    Saghaug, Kristin Falck; Pattison, George; Lindgren, Peter

    2014-01-01

    with reference to Tillich’s account of the meaning of revelation through culture and art, summed up in the statement that “(...) revelation is the manifestation of the ground of being for human knowledge” (Tillich, 1951, p.94), which, we argue, can be extended to everyday experiences, for example, in business...... life. In Tillich’s own terms, even preliminary concerns may point at an ultimate concern (Tillich, 1964), which can also be understood as ‘knowledge of the heart’. Our account is also connected to wider discussions concerning the nature of intuition....

  13. Hybrid Airy Plasmons with Dynamically Steerable Trajectories

    OpenAIRE

    Li, Rujiang; Imran, Muhammad; Lin, Xiao; Wang, Huaping; Xu, Zhiwei; Chen, Hongsheng

    2016-01-01

    With the intriguing properties of diffraction-free, self-accelerating, and self-healing, Airy plasmons are promising to be used in the trapping, transporting, and sorting of micro-objects, imaging, and chip scale signal processing. However, the high dissipative loss and the lack of dynamical steerability restrict the implementation of Airy plasmons in these applications. Here we reveal the hybrid Airy plasmons for the first time by taking a hybrid graphene-based plasmonic waveguide in the ter...

  14. Regular Changes in the Fine Structure of Histograms Revealed in the Experiments with Collimators which Isolate Beams of Alpha-Particles Flying at Certain Directions

    Directory of Open Access Journals (Sweden)

    Shnoll S. E.

    2009-04-01

    Full Text Available As was shown in the works of 1951–1983, the fine structure of distributions of the re- sults of measurements of processes of diverse nature is not casual. The changes in the shape of histograms corresponding to the distributions were called “macroscopic fluctu- ations”. The universal character of the phenomenon and its independence of the nature of the process studied were demonstrated for various processes: biochemical and chem- ical reactions, movement of latex particles in the electric field, proton transverse relax- ation in the inhomogeneous magnetic field, discharge in the neon-tube RC-generator and radioactive decay of various - and -isotopes. Since 1982, the main object chosen to study macroscopic fluctuations has been -decay. The choice was based on the pro- cess being a priori independent of trivial factors and the possibility to conduct continu- ous long-term automatic measurements while storing the results in a computer archive (database. Started in 1982, these measurements have been carrying on, as unceasingly as possible, until now. Since July 2000, the measurements are conducted using devices designed by one of the coauthors of this review, I. A. Rubinstein. Application of these devices (especially, detectors with collimators which isolate beams of -particles fly- ing at certain directions, along with the use of Edwin Pozharsky’s computer program, which eases histogram comparing by the expert, has allowed us to reveal a number of fundamentally new regularities. In the review, we describe these regularities, device constructions, and the methods of measurement and analysis of the results obtained.

  15. Studies on synthetic LuxR solo hybrids

    Directory of Open Access Journals (Sweden)

    Daniel ePassos da Silva

    2015-06-01

    Full Text Available A sub-group of LuxR family of proteins that plays important roles in quorum sensing, a process of cell-cell communication, is widespread in proteobacteria. These proteins have a typical modular structure consisting of N-ter autoinducer binding and C-ter helix-turn-helix (HTH DNA binding domains. The autoinducer binding domain recognizes signaling molecules which are most often N-acyl homoserine lactones (AHLs but could also be other novel and yet unidentified molecules. In this study we carried out a series of specific domain swapping and promoter activation experiments as a first step to engineer synthetic signaling modules, taking advantage of the modularity and the versatile/diverse signal specificities of LuxR proteins. In our experiments the N-ter domains from different LuxR homologs were either interchanged or placed in tandem followed by a C-ter domain. The rational design of the hybrid proteins was supported by a structure-based homology modeling studies of three members of the LuxR family (i.e. LasR, RhlR and OryR being chosen for their unique ligand binding specificities and of selected chimeras. Our results reveal that these LuxR homologs were able to activate promoter elements that were not their usual targets; we also show that hybrid LuxR proteins retained the ability to recognize the signal specific for their N- ter autoinducer binding domain. However, the activity of hybrid LuxR proteins containing two AHL binding domains in tandem appears to depend on the organization and nature of the introduced domains. This study represents advances in the understanding of the modularity of LuxR proteins and provides additional possibilities to use hybrid proteins in both basic and applied synthetic biology based research.

  16. Studies on synthetic LuxR solo hybrids.

    Science.gov (United States)

    da Silva, Daniel Passos; Patel, Hitendra K; González, Juan F; Devescovi, Giulia; Meng, Xianfa; Covaceuszach, Sonia; Lamba, Doriano; Subramoni, Sujatha; Venturi, Vittorio

    2015-01-01

    A sub-group of LuxR family of proteins that plays important roles in quorum sensing, a process of cell-cell communication, is widespread in proteobacteria. These proteins have a typical modular structure consisting of N-ter autoinducer binding and C-ter helix-turn-helix (HTH) DNA binding domains. The autoinducer binding domain recognizes signaling molecules which are most often N-acyl homoserine lactones (AHLs) but could also be other novel and yet unidentified molecules. In this study we carried out a series of specific domain swapping and promoter activation experiments as a first step to engineer synthetic signaling modules, taking advantage of the modularity and the versatile/diverse signal specificities of LuxR proteins. In our experiments the N-ter domains from different LuxR homologs were either interchanged or placed in tandem followed by a C-ter domain. The rational design of the hybrid proteins was supported by a structure-based homology modeling studies of three members of the LuxR family (i.e., LasR, RhlR, and OryR being chosen for their unique ligand binding specificities) and of selected chimeras. Our results reveal that these LuxR homologs were able to activate promoter elements that were not their usual targets; we also show that hybrid LuxR proteins retained the ability to recognize the signal specific for their N- ter autoinducer binding domain. However, the activity of hybrid LuxR proteins containing two AHL binding domains in tandem appears to depend on the organization and nature of the introduced domains. This study represents advances in the understanding of the modularity of LuxR proteins and provides additional possibilities to use hybrid proteins in both basic and applied synthetic biology based research.

  17. Common-garden experiments reveal geographical variation in the interaction among Crotalaria pallida (Leguminosae: Papilionideae), Utetheisa ornatrix L. (Lepidoptera: Arctiidae), and extrafloral nectary visiting ants.

    Science.gov (United States)

    Franco, M S; Cogni, R

    2013-06-01

    The study of geographical variation is a key approach to understand evolution of ecological interactions. We investigated geographical variation in the interaction among Crotalaria pallida (Leguminosae: Papilionideae), its specialized herbivore, Utetheisa ornatrix L. (Lepidoptera: Arctiidae), and ants attracted to extrafloral nectaries (EFNs). First, we used common-garden experiments with plants collected in different sites at different geographical scales to test for differences among populations in C. pallida attractiveness to ants. When we compared three populations from Southeast Brazil (150 km apart), the number of visiting ants per plant, and the percent of termite baits attacked by ants, were significantly different among plant populations. In a comparison of populations from SE Brazil and Florida (USA), there was no significant difference between the populations in the number of ants per plant or the frequency of baits attacked. Second, we tested in a common garden if U. ornatrix larvae present any behavior to avoid ant predation, and if there were genetic differences among populations. We observed that most larvae moved away from the vicinity of the EFNs (flowers and fruits) to the plant leaves. Of the larvae that moved to leaves, only 10% were attacked by ants while 89% of larvae that stayed near the fruit/flower were attacked. There was a significant difference among populations in the frequency of larvae that moved to the leaves and the frequency of larvae attacked by ants. We discuss the possible causes of the geographical differences observed and propose future research directions in this system.

  18. The Glycan Role in the Glycopeptide Immunogenicity Revealed by Atomistic Simulations and Spectroscopic Experiments on the Multiple Sclerosis Biomarker CSF114(Glc)

    Science.gov (United States)

    Bruno, Agostino; Scrima, Mario; Novellino, Ettore; D'Errico, Gerardino; D'Ursi, Anna Maria; Limongelli, Vittorio

    2015-03-01

    Glycoproteins are often recognized as not-self molecules by antibodies triggering the onset of severe autoimmune diseases such as Multiple Sclerosis (MS). Thus, the development of antigen-mimicking biomarkers represents an attractive strategy for an early diagnosis of the disease. An example is the synthetic glycopeptide CSF114(Glc), which was designed and tested as MS biomarker and whose clinical application was limited by its reduced ability to detect autoantibodies in MS patients. In the attempt to improve the efficacy of CSF114(Glc), we have characterized all the events leading to the final binding of the biomarker to the autoantibody using atomistic simulations, ESR and NMR experiments. The glycosydic moiety plays a primary role in the whole process. In particular, in an environment mimicking that used in the clinical tests the glycopeptide assumes a α-helix structure that is functional for the interaction with the antibody. In this conformation CSF114(Glc) binds the monoclonal antibody mAb8-18C5 similarly to the myelin oligodendrocyte glycoprotein MOG, which is a known MS auto-antigen, thus explaining its diagnostic activity. Our study offers new molecular bases to design more effective biomarkers and provides a most valid protocol to investigate other systems where the environment effect is determinant for the biological activity.

  19. Organic/inorganic hybrid coatings for anticorrosion

    Science.gov (United States)

    He, Zhouying

    Compared to organic coatings, organic-inorganic hybrid coatings can potentially improve the anticorrosion performance. The organic phase provides the excellent mechaincal and barrier properties while the inorganic phase acts as an adhesion promoter and corrosion inhibitor. Despite that many studies on alkoxylsilane-based hybrid coatings have been developed and studied, their weatherability and anticorrosion performance has been rarely evaluated. On the other hand, organic-inorganic hybrid coatings based on mixed sol-gel precursors have received much less attention compared to alkoxylsilane-based hybrid coatings. In the first part, polyurethane hybrid coatings with a unique hybrid crosslinked structure as an improved unicoat were successfully prepared. The effect of polyesters on physical properties of the hybrid coatings was studied. Polyurethane coatings derived from cycloaliphatic polyester show comparable properties than those derived from the commercially viable aromatic polyester. Introducing the polysiloxane part into the polyurethane coatings enhanced the crosslinking density, Tg, mechanical properties, and general coating properties. The increased adhesion between the hybrid coating and the substrate make the hybrid coating a good candidate for anticorrosion application, which is shown by electrochemical impedance spectroscopy (EIS). The degradation mechanism of the polyurethane/polysiloxane hybrid coatings under various weathering conditions was shown to be the scission of the urethane and ester groups in the organic phase along with reorganizing and rearranging of the inorganic phase. The anticorrosion performance of the cycloaliphatic hybrid was much better than that of aromatic based hybrid under outdoor weathering based on visual observation and EIS analysis. Acid undercutting is an issue for TEOS based hybrid coating. In the second part, design of experiments (DOEs) was used to statistically investigate on the effect of sol-gel precursors. The

  20. Possible natural hybridization of two morphologically distinct species of Acropora (Cnidaria, Scleractinia in the Pacific: fertilization and larval survival rates.

    Directory of Open Access Journals (Sweden)

    Naoko Isomura

    Full Text Available Natural hybridization of corals in the Indo-Pacific has been considered rather rare. However, field studies have observed many corals with intermediate interspecific or unusual morphologies. Given that the existence of F1 hybrids with intermediate interspecific morphologies has been proven in the Caribbean, hybrids may also inhabit the Indo-Pacific and occur more frequently than expected. In this study, we focused on two morphologically different species, Acropora florida and A. intermedia, and performed crossing experiments at Akajima Island, Japan. Results showed that these species could hybridize in both directions via eggs and sperm, but that fertilization rates significantly differed according to which species provided eggs. These results are similar to those reported from the Caribbean. Although all embryos developed normally to the planular larval stage, the developmental processes of some hybrid embryos were delayed by approximately 1 h compared with conspecific embryos, suggesting that fertilization occurred 1 h later in interspecific crosses than in intraspecific crosses. More successful hybridization could occur under conditions with low numbers of conspecific colonies. Additionally, a comparison of survival rates between hybrid and intraspecific larvae revealed that intra- and interspecific larvae produced from eggs of A. florida survived for significantly longer than those produced from eggs of A. intermedia. Considering these data, under specific conditions, hybrids can be expected to be produced and survive in nature in the Pacific. Furthermore, we identified one colony with intermediate morphology between A. florida and A. intermedia in the field. This colony was fertilized only by eggs of A. florida, with high fertilization rates, suggesting that this colony would be a hybrid of these two species and might be backcrossed.

  1. Genomic networks of hybrid sterility.

    Directory of Open Access Journals (Sweden)

    Leslie M Turner

    2014-02-01

    Full Text Available Hybrid dysfunction, a common feature of reproductive barriers between species, is often caused by negative epistasis between loci ("Dobzhansky-Muller incompatibilities". The nature and complexity of hybrid incompatibilities remain poorly understood because identifying interacting loci that affect complex phenotypes is difficult. With subspecies in the early stages of speciation, an array of genetic tools, and detailed knowledge of reproductive biology, house mice (Mus musculus provide a model system for dissecting hybrid incompatibilities. Male hybrids between M. musculus subspecies often show reduced fertility. Previous studies identified loci and several X chromosome-autosome interactions that contribute to sterility. To characterize the genetic basis of hybrid sterility in detail, we used a systems genetics approach, integrating mapping of gene expression traits with sterility phenotypes and QTL. We measured genome-wide testis expression in 305 male F2s from a cross between wild-derived inbred strains of M. musculus musculus and M. m. domesticus. We identified several thousand cis- and trans-acting QTL contributing to expression variation (eQTL. Many trans eQTL cluster into eleven 'hotspots,' seven of which co-localize with QTL for sterility phenotypes identified in the cross. The number and clustering of trans eQTL-but not cis eQTL-were substantially lower when mapping was restricted to a 'fertile' subset of mice, providing evidence that trans eQTL hotspots are related to sterility. Functional annotation of transcripts with eQTL provides insights into the biological processes disrupted by sterility loci and guides prioritization of candidate genes. Using a conditional mapping approach, we identified eQTL dependent on interactions between loci, revealing a complex system of epistasis. Our results illuminate established patterns, including the role of the X chromosome in hybrid sterility. The integrated mapping approach we employed is

  2. Genomic networks of hybrid sterility.

    Science.gov (United States)

    Turner, Leslie M; White, Michael A; Tautz, Diethard; Payseur, Bret A

    2014-02-01

    Hybrid dysfunction, a common feature of reproductive barriers between species, is often caused by negative epistasis between loci ("Dobzhansky-Muller incompatibilities"). The nature and complexity of hybrid incompatibilities remain poorly understood because identifying interacting loci that affect complex phenotypes is difficult. With subspecies in the early stages of speciation, an array of genetic tools, and detailed knowledge of reproductive biology, house mice (Mus musculus) provide a model system for dissecting hybrid incompatibilities. Male hybrids between M. musculus subspecies often show reduced fertility. Previous studies identified loci and several X chromosome-autosome interactions that contribute to sterility. To characterize the genetic basis of hybrid sterility in detail, we used a systems genetics approach, integrating mapping of gene expression traits with sterility phenotypes and QTL. We measured genome-wide testis expression in 305 male F2s from a cross between wild-derived inbred strains of M. musculus musculus and M. m. domesticus. We identified several thousand cis- and trans-acting QTL contributing to expression variation (eQTL). Many trans eQTL cluster into eleven 'hotspots,' seven of which co-localize with QTL for sterility phenotypes identified in the cross. The number and clustering of trans eQTL-but not cis eQTL-were substantially lower when mapping was restricted to a 'fertile' subset of mice, providing evidence that trans eQTL hotspots are related to sterility. Functional annotation of transcripts with eQTL provides insights into the biological processes disrupted by sterility loci and guides prioritization of candidate genes. Using a conditional mapping approach, we identified eQTL dependent on interactions between loci, revealing a complex system of epistasis. Our results illuminate established patterns, including the role of the X chromosome in hybrid sterility. The integrated mapping approach we employed is applicable in a broad

  3. Revealing Hearts

    DEFF Research Database (Denmark)

    Saghaug, Kristin Falck; Pattison, George; Lindgren, Peter

    2014-01-01

    Some small business owners want to balance personal values as well as economic values. “I have to follow my heart” or “it must be meaningful” some of them say. But how might they be able to know what gives meaning to the heart? The philosophical theologian Paul Tillich finds that the problem...... with reference to Tillich’s account of the meaning of revelation through culture and art, summed up in the statement that “(...) revelation is the manifestation of the ground of being for human knowledge” (Tillich, 1951, p.94), which, we argue, can be extended to everyday experiences, for example, in business...... life. In Tillich’s own terms, even preliminary concerns may point at an ultimate concern (Tillich, 1964), which can also be understood as ‘knowledge of the heart’. Our account is also connected to wider discussions concerning the nature of intuition....

  4. Overview on hybrid propulsion

    Science.gov (United States)

    Calabro, M.

    2011-10-01

    Aside of research works, this historical survey shows propulsion units used by students for small satellites and for gas generation, or those for the Space Ship One, even if LOx/HTPB was studied and tested in large motors for its potential very low cost; however, this combination highlights a series of technical problems without any performance advantage over the existing LOx/Kerosene family and never been operational for ETO applications. The particularity of hybrid propulsion is to use the state-of-the-art of both liquids and solids; the only show stopper is the propellant itself. The past work focused on LOx/HTPB (selected for its low cost) appears to be a dead-end (combustion problems and global low performances resulting from a high level of residuals). The solution that appears through the past experience is the addition of hydrides to a binder (HTPB or other) or to a binder and a homogeneous fuel or a mixture of both, with or without others additives; within these solutions some will not present any manufacturing problem and some may have a low cost. Nevertheless, the studies of the following phases have to demonstrate the compatibility of the potential regression rate range with a high-performance global design of a hybrid Motor and the manufacturing at a reasonable cost of a hydride giving a high level of performances.

  5. Histogram analysis reveals a better delineation of tumor volume from background in {sup 18}F-FET PET compared to CBV maps in a hybrid PET–MR studie in gliomas

    Energy Technology Data Exchange (ETDEWEB)

    Filss, Christian P., E-mail: c.filss@fz-juelich.de [Institute of Neuroscience and Medicine (INM-3,-4,-5), Research Center Jülich, Jülich (Germany); Stoffels, Gabriele [Institute of Neuroscience and Medicine (INM-3,-4,-5), Research Center Jülich, Jülich (Germany); Galldiks, Norbert [Institute of Neuroscience and Medicine (INM-3,-4,-5), Research Center Jülich, Jülich (Germany); Department of Neurology, University of Cologne, Cologne (Germany); Sabel, Michael [Department of Neurosurgery, University Düsseldorf, Medical Faculty, Düsseldorf (Germany); Wittsack, Hans J. [Department of Diagnostic and Interventional Radiology, University Düsseldorf, Medical Faculty, Düsseldorf (Germany); Coenen, Heinz H. [Institute of Neuroscience and Medicine (INM-3,-4,-5), Research Center Jülich, Jülich (Germany); Jülich-Aachen Research Alliance (JARA) – Section JARA-Brain (Germany); Shah, Nadim J. [Institute of Neuroscience and Medicine (INM-3,-4,-5), Research Center Jülich, Jülich (Germany); Jülich-Aachen Research Alliance (JARA) – Section JARA-Brain (Germany); Department of Neurology, RWTH Aachen University Hospital, Aachen (Germany); Herzog, Hans [Institute of Neuroscience and Medicine (INM-3,-4,-5), Research Center Jülich, Jülich (Germany); Jülich-Aachen Research Alliance (JARA) – Section JARA-Brain (Germany); and others

    2014-01-11

    Anatomical imaging with magnetic resonance imaging (MRI) is currently the method of first choice for diagnostic investigation of glial tumors. However, different MR sequences may over- or underestimate tumor size and thus it may not be possible to delineate tumor from adjacent brain. In order to compensate this confinement additonal MR sequences like perfusion weighted MRI (PWI) with regional cerebral blood volume (rCBV) or positron emission tomography (PET) with aminoacids are used to gain further information. Recent studies suggest that both of theses image modalities provide similar diagnostic information. For comparison tumor to brain ratios (TBR) with mean and maximum values are frequently used but results from different studies can often not be checked against each other. Furthermore, especially the maximum TBR in rCBV is at risk to be falsified by artifacts (e.g. blood vessels). These confinements are reduced by the use of histograms since all information of the VOIs are equally displayed. In this study we measured and compared the intersection of tumor and reference tissue histograms in {sup 18}F-FET PET and rCBV maps in glioma patients. Methods: Twenty-seven glioma patients with contrast enhancing lesion on T1-weighted MR images were investigated using static {sup 18}F-FET PET and rCBV in MRI using a PET–MR hybrid scanner. In all patients diagnosis was confirmed histologically (7 grade II gliomas, 6 grade III gliomas and 14 grade IV gliomas). We generated a set of tumor and reference tissue Volumes-of-Interest (VOIs) based on T1 weighted images in MRI with the tumor VOI defined by contrast enhancement and transferred these VOIs to the corresponding {sup 18}F-FET PET scans and rCBV maps. From these VOIs we generated tumor and reference tissue histograms with a unity of one for each curve integral and measured the proportion of the area under the tumor curve that falls into the reference curve for {sup 18}F-FET PET and rCBV maps for each patient. Results

  6. Revealing Rembrandt

    Directory of Open Access Journals (Sweden)

    Andrew J Parker

    2014-04-01

    Full Text Available The power and significance of artwork in shaping human cognition is self-evident. The starting point for our empirical investigations is the view that the task of neuroscience is to integrate itself with other forms of knowledge, rather than to seek to supplant them. In our recent work, we examined a particular aspect of the appreciation of artwork using present-day functional magnetic resonance imaging (fMRI. Our results emphasised the continuity between viewing artwork and other human cognitive activities. We also showed that appreciation of a particular aspect of artwork, namely authenticity, depends upon the co-ordinated activity between the brain regions involved in multiple decision making and those responsible for processing visual information. The findings about brain function probably have no specific consequences for understanding how people respond to the art of Rembrandt in comparison with their response to other artworks. However, the use of images of Rembrandt’s portraits, his most intimate and personal works, clearly had a significant impact upon our viewers, even though they have been spatially confined to the interior of an MRI scanner at the time of viewing. Neuroscientific studies of humans viewing artwork have the capacity to reveal the diversity of human cognitive responses that may be induced by external advice or context as people view artwork in a variety of frameworks and settings.

  7. Sporocidic properties of poly(vinyl alcohol)/silver nanoparticles/TEOS thin hybrid films.

    Science.gov (United States)

    Pencheva, Daniela; Bryaskova, Rayna; Lad, Umesh; Kale, Girish M; Kantardjiev, T

    2012-06-01

    The sporocidic activity of hybrid materials based on PVA/AgNps/TEOS thin films has been investigated. Deep Agar Method has been applied to study the sporocidic properties of these hybrid materials with different silver concentrations. This method has been used because of the lack of standard methods for testing the sporocidic activity in such materials and due to the specific characteristics of bacterial spore. Clear and pronounced presence of sporocidic activity of the hybrid materials towards spores of control strains Bacillus subtilis ATCC 6633 and Geobacillus stearothermophilus ATCC 7953 has been established. The use of chromatographic paper disks impregnated with PVA/AgNps/TEOS showed the advantages in testing the biological properties of the hybrid material in comparison to the disks obtained by directly cutting the PVA/AgNps/TEOS films. The highest sporocidic activity, although with small deviation of 0.5-1.0 mm, was established at the PVA/AgNps/TEOS hybrid films with concentration of silver precursor 9.2 mg/mL and 18.3 mg/mL. The experiments were performed with the aim to reveal the opportunities for a practical application of the material.

  8. 空气-水复合平板型太阳能集热器%Experiment test of hybrid air-water solar flat plate collector

    Institute of Scientific and Technical Information of China (English)

    赵东亮; 代彦军; 李勇

    2011-01-01

    This paper focuses on a new type of solar collector that has the potential for using in solar heating systems. It can use both air and water as the circulation mediums. Experiment results show that the collector efficiency is between 55%~65% when air is used as the circulation medium, while the efficiency is between 32%~34% for using water as the circulation medium, and it can meet the requirement of solar heating systems. Moreover, this collector is fairly cheap, therefore, especially suitable for the rural areas in north China.%提出了一种适用于太阳能供热采暖工程的新型太阳能空气-水复合平板集热器.该集热器可以单独使用空气、水或同时以空气和水作为集热工质.测试显示,该集热器空气循环集热效率为55%~65%,水循环集热效率为32%~34%,能够满足太阳能供热采暖工程的要求.该集热器成本不高,适用于在我国北方广大农村地区推广使用.

  9. Perovskite-fullerene hybrid materials suppress hysteresis in planar diodes.

    KAUST Repository

    Xu, Jixian

    2015-05-08

    Solution-processed planar perovskite devices are highly desirable in a wide variety of optoelectronic applications; however, they are prone to hysteresis and current instabilities. Here we report the first perovskite-PCBM hybrid solid with significantly reduced hysteresis and recombination loss achieved in a single step. This new material displays an efficient electrically coupled microstructure: PCBM is homogeneously distributed throughout the film at perovskite grain boundaries. The PCBM passivates the key PbI3(-) antisite defects during the perovskite self-assembly, as revealed by theory and experiment. Photoluminescence transient spectroscopy proves that the PCBM phase promotes electron extraction. We showcase this mixed material in planar solar cells that feature low hysteresis and enhanced photovoltage. Using conductive AFM studies, we reveal the memristive properties of perovskite films. We close by positing that PCBM, by tying up both halide-rich antisites and unincorporated halides, reduces electric field-induced anion migration that may give rise to hysteresis and unstable diode behaviour.

  10. The perfect ash-storm: large-scale Pyroclastic Density Current experiments reveal highly mobile, self-fluidising and air-cushioned flow transport regime

    Science.gov (United States)

    Lube, G.; Cronin, S. J.; Breard, E.; Valentine, G.; Bursik, M. I.; Hort, M. K.; Freundt, A.

    2013-12-01

    We report on the first systematic series of large-scale Pyroclastic Density Current (PDC) experiments using the New Zealand PDC Generator, a novel international research facility in Physical Volcanology recently commissioned at Massey University. Repeatable highly energetic and hot PDCs are synthesized by the controlled ';eruption column-collapse' of up to 3500 kg of homogenously aerated Taupo ignimbrite material from a 15 m-elevated hopper onto an instrumented inclined flume. At discharge rates between 250-1300 kg/s and low- to moderate gas injection rates (yielding initial solids concentration of 15-70 vol%) channelized gas-particle mixture flows life-scaled to dense PDCs can be generated. The flow fronts of the currents reach velocities of up to 9.5 m/s over their first 12 m of travel and rapidly develop strong vertical density stratification. The PDCs typically form a highly mobile, surge that also laterally escapes the flume boundaries. Depending on the PDC starting conditions underflows with 1-45 vol% solids concentration are formed, while the upper surge contains <<1 vol.% solids. A characteristic feature of the underflow is the occurrence of 'ignitive' front breakouts, producing jetted lobes that accelerate outward from the flow front, initially forming a lobe-cleft structure, followed by segregation downslope into multiple flow pulses. Depending on initial solids concentration and discharge rate, stratified, dune-bedded and inversely graded bedforms are created whose thicknesses are remarkably uniform along the medial to distal runout path characterising highly mobile flow runout. Along with high-speed video footage we present time-series data of basal arrays of load- and gas-pore pressure transducers to characterise the mobile dense underflows. Data shows that the PDCs are comprised of a turbulent coarse-grained and air-ingesting front with particle-solids concentrations of 1-5 vol%. The front shows a brief phase of negative pore pressure due to the

  11. From hybrid swarms to swarms of hybrids

    Science.gov (United States)

    The introgression of modern humans (Homo sapiens) with Neanderthals 40,000 YBP after a half-million years of separation, may have led to the best example of a hybrid swarm on earth. Modern trade and transportation in support of the human hybrids has continued to introduce additional species, genotyp...

  12. The Hybrid Museum: Hybrid Economies of Meaning

    DEFF Research Database (Denmark)

    Vestergaard, Vitus

    2013-01-01

    this article shows that there are two different museum mindsets where the second mindset leans towards participatory practices. It is shown how a museum can support a hybrid economy of meaning that builds on both a user generated economy of meaning and an institutional economy of meaning and adds value to both....... Such a museum is referred to as a hybrid museum....

  13. Hydraulic Hybrid Vehicles

    Science.gov (United States)

    EPA and the United Parcel Service (UPS) have developed a hydraulic hybrid delivery vehicle to explore and demonstrate the environmental benefits of the hydraulic hybrid for urban pick-up and delivery fleets.

  14. Hybrid Management in Hospitals

    DEFF Research Database (Denmark)

    Byrkjeflot, Haldor; Jespersen, Peter Kragh

    2010-01-01

    Artiklen indeholder et litteraturbaseret studium af ledelsesformer i sygehuse, hvor sundhedsfaglig ledelse og generel ledelse mikses til hybride ledelsesformer......Artiklen indeholder et litteraturbaseret studium af ledelsesformer i sygehuse, hvor sundhedsfaglig ledelse og generel ledelse mikses til hybride ledelsesformer...

  15. Model-Invariant Hybrid Computations of Separated Flows for RCA Standard Test Cases

    Science.gov (United States)

    Woodruff, Stephen

    2016-01-01

    NASA's Revolutionary Computational Aerosciences (RCA) subproject has identified several smooth-body separated flows as standard test cases to emphasize the challenge these flows present for computational methods and their importance to the aerospace community. Results of computations of two of these test cases, the NASA hump and the FAITH experiment, are presented. The computations were performed with the model-invariant hybrid LES-RANS formulation, implemented in the NASA code VULCAN-CFD. The model- invariant formulation employs gradual LES-RANS transitions and compensation for model variation to provide more accurate and efficient hybrid computations. Comparisons revealed that the LES-RANS transitions employed in these computations were sufficiently gradual that the compensating terms were unnecessary. Agreement with experiment was achieved only after reducing the turbulent viscosity to mitigate the effect of numerical dissipation. The stream-wise evolution of peak Reynolds shear stress was employed as a measure of turbulence dynamics in separated flows useful for evaluating computations.

  16. Hybrid origin of Audubon's warbler.

    Science.gov (United States)

    Brelsford, Alan; Milá, Borja; Irwin, Darren E

    2011-06-01

    Several animal species have recently been shown to have hybrid origins, but no avian examples have been documented with molecular evidence. We investigate whether the Audubon's warbler (Dendroica auduboni), one of four visually distinct species in the yellow-rumped warbler complex, has originated through hybridization between two other species in this group, the myrtle warbler (D. coronata) and black-fronted warbler (D. nigrifrons). Analysis of nuclear amplified fragment length polymorphism (AFLP) and sequence markers shows that Audubon's warblers are genetically intermediate and carry a mixture of alleles otherwise found only in one or the other of their putative parental species. Audubon's warblers also carry two deeply divergent mitochondrial DNA lineages, each shared with only one putative parental form. Broad clines between Audubon's and black-fronted warblers in AFLP markers call into question the validity of these two forms as full species; nevertheless, our results suggest that the Audubon's warbler probably originated through hybridization between two long-diverged species. It is likely that more cases of avian species of hybrid origin will be revealed by surveys of variation in nuclear DNA and other traits. © 2011 Blackwell Publishing Ltd.

  17. Development and implementation of an online hybrid model for teaching evidence-based practice to health professions: processes and outcomes from an Australian experience

    Directory of Open Access Journals (Sweden)

    Saravana Kumar

    2010-08-01

    Full Text Available Saravana Kumar, Luke Perraton, Zuzana Machotka.International Centre for Allied Health Evidence, School of Health Sciences, University of South Australia, Adelaide, South Australia.Abstract: Evidence-based practice is now considered to be a vital element of health care service delivery. The call to use evidence to inform other areas, such as teaching and learning, is growing. This paper reports on the processes used to integrate best evidence into teaching practices within an undergraduate health science program. An existing course within this program at an Australian tertiary institution was remodeled by a newly appointed course coordinator in response to critical feedback from student cohorts. A systematic, iterative, five-step approach was used in the development of the new course. The process of development was influenced by current research evidence, an audit of the existing course, and critical feedback from ­students. The new course was evaluated using quantitative and qualitative research methods for five study periods. In 2005, prior to implementing the changes, the overall student satisfaction rating for the course was zero (representing the lowest possible score. In 2006, the overall student satisfaction rating was 62.07, in 2007 it was 65.8, and in 2008 it was 55.7. Qualitative ­findings also supported these quantitative findings, indicating improvements in the structure and process of the new course. The outcomes from the evaluation of the remodeled course provide evidence of a consistent quality learning experience for students, and support the concept of using research evidence to guide the development of teaching and learning practices in the training of health professionals.Keywords: evidence-based teaching, learning, health care, qualitative, quantitative.

  18. Demonstration experiment of nutrient formula fertilization technique on super hybrid rice%超级杂交稻营养套餐施肥技术示范试验报告

    Institute of Scientific and Technical Information of China (English)

    沈静; 张文波; 杨树祥; 余根德; 陈绍荣; 白云飞; 白周荣

    2012-01-01

    介绍超级杂交水稻应用营养套餐施肥技术和示范试验结果,667m2产量达到867.17kg,比常规施肥对照区增产34.41%。主要增产因素是施用了高效优化的高科技肥料——含硅、锌养分的腐植酸复合肥和高效叶面肥,充分满足了水稻超高产栽培的营养需求。%The application of nutrient formula fertilization technique and the results of demonstration experiment are introduced: the yield of super hybrid rice is 867.17 kg every 667 m2, with the yield increase by 34.41% compared with the conventional fertilization. The main factors of yield increase are the applications of efficient optimization high-tech fertilizer: humic acid compound fertilizer containing silicon and zinc, and high active foliar fertilizer, which can fully meet nutrient demand of the super-high-yield rice.

  19. Resin Catalyst Hybrids

    Institute of Scientific and Technical Information of China (English)

    S. Asaoka

    2005-01-01

    @@ 1Introduction: What are resin catalyst hybrids? There are typically two types of resin catalyst. One is acidic resin which representative is polystyrene sulfonic acid. The other is basic resin which is availed as metal complex support. The objective items of this study on resin catalyst are consisting of pellet hybrid, equilibrium hybrid and function hybrid of acid and base,as shown in Fig. 1[1-5].

  20. Mesoscale hybrid calibration artifact

    Science.gov (United States)

    Tran, Hy D.; Claudet, Andre A.; Oliver, Andrew D.

    2010-09-07

    A mesoscale calibration artifact, also called a hybrid artifact, suitable for hybrid dimensional measurement and the method for make the artifact. The hybrid artifact has structural characteristics that make it suitable for dimensional measurement in both vision-based systems and touch-probe-based systems. The hybrid artifact employs the intersection of bulk-micromachined planes to fabricate edges that are sharp to the nanometer level and intersecting planes with crystal-lattice-defined angles.

  1. Realizing the Hybrid Library.

    Science.gov (United States)

    Pinfield, Stephen; Eaton, Jonathan; Edwards, Catherine; Russell, Rosemary; Wissenburg, Astrid; Wynne, Peter

    1998-01-01

    Outlines five projects currently funded by the United Kingdom's Electronic Libraries Program (eLib): HyLiFe (Hybrid Library of the Future), MALIBU (MAnaging the hybrid Library for the Benefit of Users), HeadLine (Hybrid Electronic Access and Delivery in the Library Networked Environment), ATHENS (authentication scheme), and BUILDER (Birmingham…

  2. Homoploid hybrid expectations

    Science.gov (United States)

    Homoploid hybrid speciation occurs when a stable, fertile, and reproductively isolated lineage results from hybridization between two distinct species without a change in ploidy level. Reproductive isolation between a homoploid hybrid species and its parents is generally attained via chromosomal re...

  3. Hybrid armature projectile

    Science.gov (United States)

    Hawke, Ronald S.; Asay, James R.; Hall, Clint A.; Konrad, Carl H.; Sauve, Gerald L.; Shahinpoor, Mohsen; Susoeff, Allan R.

    1993-01-01

    A projectile for a railgun that uses a hybrid armature and provides a seed block around part of the outer surface of the projectile to seed the hybrid plasma brush. In addition, the hybrid armature is continuously vaporized to replenish plasma in a plasma armature to provide a tandem armature and provides a unique ridge and groove to reduce plasama blowby.

  4. Hybrid quantum information processing

    Energy Technology Data Exchange (ETDEWEB)

    Furusawa, Akira [Department of Applied Physics, School of Engineering, The University of Tokyo (Japan)

    2014-12-04

    I will briefly explain the definition and advantage of hybrid quantum information processing, which is hybridization of qubit and continuous-variable technologies. The final goal would be realization of universal gate sets both for qubit and continuous-variable quantum information processing with the hybrid technologies. For that purpose, qubit teleportation with a continuousvariable teleporter is one of the most important ingredients.

  5. PRODUCTION VALUES OF INVESTIGATED SUGAR BEET HYBRIDS

    Directory of Open Access Journals (Sweden)

    M. Pospišil

    2006-06-01

    Full Text Available Production values of 43 experimental and recognized sugar beet hybrids were conducted on the Zagreb location in the period 2003-2005. The trials included hybrids from six breeding institutions that sell sugar beet seed in the Republic of Croatia. Research results have revealed significant differences in yields and root quality among inve- stigated sugar beet hybrids. However, the results of a large number of hybrids were equal in value; namely, the dif- ference between them was within the statistically allowable deviation. The hybrids KW 0148 HR and Buda in 2003, Sofarizo and Takt were distinguished by high sugar yields in 2004, whereas Merak, Impact and Europa in 2005. The highest root yields were recorded for hybrids Dioneta, Buda and KW 0148 HR in 2003, Sofarizo, Takt, HI 0191 and Dorotea in 2004, Impact and SES 2371 in 2005. The highest root sugar contents were determined in hybrids Zita and Evelina in 2003, Cyntia, Diamant and Belinda in 2004, and Merak, Belinda and Cyntia in 2005.

  6. The hydrogen hybrid option

    Energy Technology Data Exchange (ETDEWEB)

    Smith, J.R.

    1993-10-15

    The energy efficiency of various piston engine options for series hybrid automobiles are compared with conventional, battery powered electric, and proton exchange membrane (PEM) fuel cell hybrid automobiles. Gasoline, compressed natural gas (CNG), and hydrogen are considered for these hybrids. The engine and fuel comparisons are done on a basis of equal vehicle weight, drag, and rolling resistance. The relative emissions of these various fueled vehicle options are also presented. It is concluded that a highly optimized, hydrogen fueled, piston engine, series electric hybrid automobile will have efficiency comparable to a similar fuel cell hybrid automobile and will have fewer total emissions than the battery powered vehicle, even without a catalyst.

  7. Media composition influences yeast one- and two-hybrid results

    Directory of Open Access Journals (Sweden)

    Gonzalez Kim L

    2011-08-01

    Full Text Available Abstract Although yeast two-hybrid experiments are commonly used to identify protein interactions, the frequent occurrence of false negatives and false positives hampers data interpretation. Using both yeast one-hybrid and two-hybrid experiments, we have identified potential sources of these problems: the media preparation protocol and the source of the yeast nitrogen base may not only impact signal range but also effect whether a result appears positive or negative. While altering media preparation may optimize signal differences for individual experiments, media preparation must be reported in detail to replicate studies and accurately compare results from different experiments.

  8. Hybridization and extinction.

    Science.gov (United States)

    Todesco, Marco; Pascual, Mariana A; Owens, Gregory L; Ostevik, Katherine L; Moyers, Brook T; Hübner, Sariel; Heredia, Sylvia M; Hahn, Min A; Caseys, Celine; Bock, Dan G; Rieseberg, Loren H

    2016-08-01

    Hybridization may drive rare taxa to extinction through genetic swamping, where the rare form is replaced by hybrids, or by demographic swamping, where population growth rates are reduced due to the wasteful production of maladaptive hybrids. Conversely, hybridization may rescue the viability of small, inbred populations. Understanding the factors that contribute to destructive versus constructive outcomes of hybridization is key to managing conservation concerns. Here, we survey the literature for studies of hybridization and extinction to identify the ecological, evolutionary, and genetic factors that critically affect extinction risk through hybridization. We find that while extinction risk is highly situation dependent, genetic swamping is much more frequent than demographic swamping. In addition, human involvement is associated with increased risk and high reproductive isolation with reduced risk. Although climate change is predicted to increase the risk of hybridization-induced extinction, we find little empirical support for this prediction. Similarly, theoretical and experimental studies imply that genetic rescue through hybridization may be equally or more probable than demographic swamping, but our literature survey failed to support this claim. We conclude that halting the introduction of hybridization-prone exotics and restoring mature and diverse habitats that are resistant to hybrid establishment should be management priorities.

  9. Semiconductor quantum dot-inorganic nanotube hybrids.

    Science.gov (United States)

    Kreizman, Ronen; Schwartz, Osip; Deutsch, Zvicka; Itzhakov, Stella; Zak, Alla; Cohen, Sidney R; Tenne, Reshef; Oron, Dan

    2012-03-28

    A synthetic route for preparation of inorganic WS(2) nanotube (INT)-colloidal semiconductor quantum dot (QD) hybrid structures is developed, and transient carrier dynamics on these hybrids are studied via transient photoluminescence spectroscopy utilizing several different types of QDs. Measurements reveal efficient resonant energy transfer from the QDs to the INT upon photoexcitation, provided that the QD emission is at a higher energy than the INT direct gap. Charge transfer in the hybrid system, characterized using QDs with band gaps below the INT direct gap, is found to be absent. This is attributed to the presence of an organic barrier layer due to the relatively long-chain organic ligands of the QDs under study. This system, analogous to carbon nanotube-QD hybrids, holds potential for a variety of applications, including photovoltaics, luminescence tagging and optoelectronics.

  10. Spoof Plasmon Hybridization

    CERN Document Server

    Zhang, Jingjing; Luo, Yu; Shen, Xiaopeng; Maier, Stefan A; Cui, Tie Jun

    2016-01-01

    Plasmon hybridization between closely spaced nanoparticles yields new hybrid modes not found in individual constituents, allowing for the engineering of resonance properties and field enhancement capabilities of metallic nanostructure. Experimental verifications of plasmon hybridization have been thus far mostly limited to optical frequencies, as metals cannot support surface plasmons at longer wavelengths. Here, we introduce the concept of 'spoof plasmon hybridization' in highly conductive metal structures and investigate experimentally the interaction of localized surface plasmon resonances (LSPR) in adjacent metal disks corrugated with subwavelength spiral patterns. We show that the hybridization results in the splitting of spoof plasmon modes into bonding and antibonding resonances analogous to molecular orbital rule and plasmonic hybridization in optical spectrum. These hybrid modes can be manipulated to produce enormous field enhancements (larger than 5000) by tuning the separation between disks or alte...

  11. 基于旋量理论的混联采摘机器人正运动学分析与试验%Forward kinematics analysis and experiment of hybrid harvesting robot based on screw theory

    Institute of Scientific and Technical Information of China (English)

    阳涵疆; 李立君; 高自成

    2016-01-01

    arm part respectively. It makes the wrist part decrease by 2 degrees of freedom, lightens the burden of the arm, and also reduces the adverse effect of high-frequency vibration when the robot harvests camellia oleifera fruit. The screw theory and a kind of kinematics analysis method for hybrid robot were introduced. With the proposed method, firstly, the open chain from the waist part to the end effector of the manipulator was defined, which contained the vertical slider as major chain, and the kinematic analysis problem of hybrid robot was turned to the sub-problems of the kinematic analysis of an open major chain and a single closed chain; secondly, the kinematics equation of the closed chain and major chain was established, and then the conversion formula between the driving joint variable in closed chain and the passive joint variable in major chain was obtained by figuring out the equation of the closed chain; thirdly, the position of the end effector was got from the kinematics analysis of the closed chain by using the Lie group, Lie algebra, screw theory and product-of-exponential formula; and finally the positive kinematics equation for the position of the end effector was obtained from the synthesized results of the kinematic analysis of the major chain and closed chain. The first-order and second-order derivative of the position equation were the velocity equation and acceleration equation of the manipulator respectively. In order to verify the feasibility of the proposed method and the correctness of the kinematics equation, select a group of joint variable values, and then figure out the theoretical position coordinate of the end effector by putting the values into the kinematical equation in Matlab. A test platform for kinematics experiment was built, which consists of a three-dimensional position measuring instrument and a camellia oleifera fruit hybrid harvesting robot. The three-dimensional position measuring instrument was used to measure the actual

  12. Marine Fish Hybridization

    KAUST Repository

    He, Song

    2017-04-01

    Natural hybridization is reproduction (without artificial influence) between two or more species/populations which are distinguishable from each other by heritable characters. Natural hybridizations among marine fishes were highly underappreciated due to limited research effort; it seems that this phenomenon occurs more often than is commonly recognized. As hybridization plays an important role in biodiversity processes in the marine environment, detecting hybridization events and investigating hybridization is important to understand and protect biodiversity. The first chapter sets the framework for this disseration study. The Cohesion Species Concept was selected as the working definition of a species for this study as it can handle marine fish hybridization events. The concept does not require restrictive species boundaries. A general history and background of natural hybridization in marine fishes is reviewed during in chapter as well. Four marine fish hybridization cases were examed and documented in Chapters 2 to 5. In each case study, at least one diagnostic nuclear marker, screened from among ~14 candidate markers, was found to discriminate the putative hybridizing parent species. To further investigate genetic evidence to support the hybrid status for each hybrid offspring in each case, haploweb analysis on diagnostic markers (nuclear and/or mitochondrial) and the DAPC/PCA analysis on microsatellite data were used. By combining the genetic evidences, morphological traits, and ecological observations together, the potential reasons that triggered each hybridization events and the potential genetic/ecology effects could be discussed. In the last chapter, sequences from 82 pairs of hybridizing parents species (for which COI barcoding sequences were available either on GenBank or in our lab) were collected. By comparing the COI fragment p-distance between each hybridizing parent species, some general questions about marine fish hybridization were discussed: Is

  13. Second harmonic generation spectroscopy on hybrid plasmonic/dielectric nanoantennas

    Institute of Scientific and Technical Information of China (English)

    Heiko Linnenbank; Yevgen Grynko; Jens F(o)rstner; Stefan Linden

    2016-01-01

    Plasmonic nanoantennas provide unprecedented opportunities to concentrate light fields in subwavelength-sized volumes.By placing a nonlinear dielectric nanoparticle in such a hot spot,one can hope to take advantage of beth the field enhancement provided by nanoantennas and the large,nonlinear optical susceptibility of dielectric nanoparticles.To test this concept,we combine gold gap nanoantennas with second-order,nonlinear zinc sulfide nanoparticles,and perform second harmonic generation (SHG) spectroscopy onthe combined hybrid dielectric/plasmonic nanoantennas as well as on the individual constituents.We find that SHG from the bare gold nanoantennas,even though it should be forbidden due to symmetry reasons,is several orders of magnitude larger than that of the bare zinc sulfide nanoparticles.Even stronger second harmonic signals are generated by the hybrid dielectric/plasmonic nanoantennas.Control experiments with nanoantennas containing linear lanthanum fluoride nanoparticles reveal;however,that the increased SHG efficiency of the hybrid dielectric/plasmonic nanoantennas does not depend on the nonlinear optical susceptibility of the dielectric nanoparticles but is an effect of the modification of the dielectric environment.The combination of a hybrid dielectric/plasmonic nanoantenna,which is only resonant for the incoming pump light field,with a second nanoantenna,which is resonant for the generated second harmonic light,allows for a further increase in the efficiency of SHG.As the second nanoantenna mediates the coupling of the second harmonic light to the far field,this double-resonant approach also provides us with control over the polarization of the generated light.

  14. Ancient hybridization and genomic stabilization in a swordtail fish.

    Science.gov (United States)

    Schumer, Molly; Cui, Rongfeng; Powell, Daniel L; Rosenthal, Gil G; Andolfatto, Peter

    2016-06-01

    A rapidly increasing body of work is revealing that the genomes of distinct species often exhibit hybrid ancestry, presumably due to postspeciation hybridization between closely related species. Despite the growing number of documented cases, we still know relatively little about how genomes evolve and stabilize following hybridization, and to what extent hybridization is functionally relevant. Here, we examine the case of Xiphophorus nezahualcoyotl, a teleost fish whose genome exhibits significant hybrid ancestry. We show that hybridization was relatively ancient and is unlikely to be ongoing. Strikingly, the genome of X. nezahualcoyotl has largely stabilized following hybridization, distinguishing it from examples such as human-Neanderthal hybridization. Hybridization-derived regions are remarkably distinct from other regions of the genome, tending to be enriched in genomic regions with reduced constraint. These results suggest that selection has played a role in removing hybrid ancestry from certain functionally important regions. Combined with findings in other systems, our results raise many questions about the process of genomic stabilization and the role of selection in shaping patterns of hybrid ancestry in the genome. © 2016 John Wiley & Sons Ltd.

  15. Impact of hybrid GSI analysis using ETR ensembles

    Indian Academy of Sciences (India)

    V S Prasad; C J Johny

    2016-04-01

    Performance of a hybrid assimilation system combining 3D Var based NGFS (NCMRWF Global ForecastSystem) with ETR (Ensemble Transform with Rescaling) based Global Ensemble Forecast (GEFS) ofresolution T-190L28 is investigated. The experiment is conducted for a period of one week in June 2013and forecast skills over different spatial domains are compared with respect to mean analysis state.Rainfall forecast is verified over Indian region against combined observations of IMD and NCMRWF.Hybrid assimilation produced marginal improvements in overall forecast skill in comparison with 3DVar. Hybrid experiment made significant improvement in wind forecasts in all the regions on verificationagainst mean analysis. The verification of forecasts with radiosonde observations also show improvementin wind forecasts with the hybrid assimilation. On verification against observations, hybrid experimentshows more improvement in temperature and wind forecasts at upper levels. Both hybrid and operational3D Var failed in prediction of extreme rainfall event over Uttarakhand on 17 June, 2013.

  16. Hybrid Fictionality and Vicarious Narrative Experience

    DEFF Research Database (Denmark)

    Hatavara, Mari Annukka; Mildorf, Jarmila

    2016-01-01

    – an interview and an online museum exhibition – show that the employment of fictional modes of mind representation and cognitive attribution occur in conversational and documentary storytelling even if the reference is to the actual world. The results indicate that the procedures used to present and engage...

  17. Fitness and morphological outcomes of many generations of hybridization in the copepod Tigriopus californicus.

    Science.gov (United States)

    Pritchard, V L; Knutson, V L; Lee, M; Zieba, J; Edmands, S

    2013-02-01

    Hybridization between genetically divergent populations is an important evolutionary process, with an outcome that is difficult to predict. We used controlled crosses and freely mating hybrid swarms, followed for up to 30 generations, to examine the morphological and fitness consequences of interpopulation hybridization in the copepod Tigriopus californicus. Patterns of fitness in two generations of controlled crosses were partly predictive of long-term trajectories in hybrid swarms. For one pair of populations, controlled crosses revealed neutral or beneficial effects of hybridization after the F1 generation, and hybrid swarm fitness almost always equalled or exceeded that of the midparent. For a second pair, controlled crosses showed F2 hybrid breakdown, but increased fitness in backcrosses, and hybrid swarm fitness deviated both above and below that of the parentals. Nevertheless, individual swarm replicates exhibited different fitness trajectories over time that were not related in a simple manner to their hybrid genetic composition, and fixation of fitter hybrid phenotypes was not observed. Hybridization did not increase overall morphological variation, and underlying genetic changes may have been masked by phenotypic plasticity. Nevertheless, one type of hybrid swarm exhibited a repeatable pattern of transgressively large eggsacs, indicating a positive effect of hybridization on individual fecundity. Additionally, both parental and hybrid swarms exhibited common phenotypic trends over time, indicating common selective pressures in the laboratory environment. Our results suggest that, in a system where much work has focused on F2 hybrid breakdown, the long-term fitness consequences of interpopulation hybridization are surprisingly benign.

  18. Integrated approach for hybrid rocket technology development

    Science.gov (United States)

    Barato, Francesco; Bellomo, Nicolas; Pavarin, Daniele

    2016-11-01

    Hybrid rocket motors tend generally to be simple from a mechanical point of view but difficult to optimize because of their complex and still not well understood cross-coupled physics. This paper addresses the previous issue presenting the integrated approach established at University of Padua to develop hybrid rocket based systems. The methodology tightly combines together system analysis and design, numerical modeling from elementary to sophisticated CFD, and experimental testing done with incremental philosophy. As an example of the approach, the paper presents the experience done in the successful development of a hybrid rocket booster designed for rocket assisted take off operations. It is thought that following the proposed approach and selecting carefully the most promising applications it is possible to finally exploit the major advantages of hybrid rocket motors as safety, simplicity, low cost and reliability.

  19. Two Photon Couplings of Hybrid Mesons

    CERN Document Server

    Page, P R

    1996-01-01

    A new formalism is developed for the two photon production of hybrid mesons via intermediate hadronic decays. In an adiabatic and non--relativistic context with spin 1 pair creation we obtain the first absolute estimates of unmixed hybrid production strengths to be small (0.03 - 3 eV) in relation to experimental meson widths (0.1 - 5 keV). Within this context, two photon collisions therefore strongly discriminate between hybrid and conventional meson wave function components at BaBar, Cleo II, LEP2 and LHC, filtering out non--gluonic components. Decay widths of unmixed hybrids are tiny. The formalism also induces conventional meson two photon widths roughly in agreement with experiment.

  20. Optically induced interaction of magnetic moments in hybrid metamaterials.

    Science.gov (United States)

    Miroshnichenko, Andrey E; Luk'yanchuk, Boris; Maier, Stefan A; Kivshar, Yuri S

    2012-01-24

    We propose a novel type of hybrid metal-dielectric structures composed of silicon nanoparticles and split-ring resonators for advanced control of optically induced magnetic response. We reveal that a hybrid "metamolecule" may exhibit a strong distance-dependent magnetic interaction that may flip the magnetization orientation and support "antiferromagnetic" ordering in a hybrid metamaterial created by a periodic lattice of such metamolecules. The propagation of magnetization waves in the hybrid structures opens new ways for manipulating artificial "antiferromagnetic" ordering at high frequencies. © 2011 American Chemical Society

  1. Experimental evidence for ovarian hypofunction in sparrow hybrids

    Institute of Scientific and Technical Information of China (English)

    Fabrice Eroukhmanoff; Melissah Rowe; Emily R A Cramer; Fredrik Haas; Jo S Hermansen; Anna Runemark; Arild Johnsen; GlennPeter Stre

    2016-01-01

    Background: Postzygotic isolation in the form of reduced viability and/or fertility of hybrids may help maintain species boundaries in the face of interspeciifc gene lfow. Past hybridization events between house sparrows (Passer domesticus) and Spanish sparrows (P. hispaniolensis) have given rise to a homoploid hybrid species, the Italian sparrow (P. italiae). Although genetic incompatibilities are known to isolate these three species, the biological consequences of these incompatibilities are still unknown in early generation hybrids. Methods: We investigated whether F1 hybrids between house and Spanish sparrows experience reduced viability or fertility. More speciifcally, we generated hybrids through controlled crosses in aviaries, and compared ovaries of female hybrids with female of pure‑species sparrows. Results: We found that overall, hybrid ovaries were underdeveloped and that half of all female hybrids exhibited symptoms of ovarian hypofunction (ovarian atrophy and complete absence of developed follicles). Conclusions: Fertility in hybrids is a common consequence or post‑zygotic barriers between species. We discuss these results in light of previous ifndings on genetic incompatibilities between the parent species and the potential role of incompatibilities in hybrid speciation, a rare evolutionary process in birds.

  2. Experimental evidence for ovarian hypofunction in sparrow hybrids

    Institute of Scientific and Technical Information of China (English)

    Fabrice Eroukhmanoff; Melissah Rowe; Emily R.A.Cramer; Fredrik Haas; Jo S.Hermansen; Anna Runemark; Arild Johnsen; Glenn?Peter S?tre

    2016-01-01

    Background: Postzygotic isolation in the form of reduced viability and/or fertility of hybrids may help maintain species boundaries in the face of interspecific gene flow. Past hybridization events between house sparrows(Passer domesticus) and Spanish sparrows(P. hispaniolensis) have given rise to a homoploid hybrid species, the Italian sparrow(P. italiae). Although genetic incompatibilities are known to isolate these three species, the biological consequences of these incompatibilities are still unknown in early generation hybrids.Methods: We investigated whether F1 hybrids between house and Spanish sparrows experience reduced viability or fertility. More specifically, we generated hybrids through controlled crosses in aviaries, and compared ovaries of female hybrids with female of pure?species sparrows.Results: We found that overall, hybrid ovaries were underdeveloped and that half of all female hybrids exhibited symptoms of ovarian hypofunction(ovarian atrophy and complete absence of developed follicles).Conclusions: Fertility in hybrids is a common consequence or post?zygotic barriers between species. We discuss these results in light of previous findings on genetic incompatibilities between the parent species and the potential role of incompatibilities in hybrid speciation, a rare evolutionary process in birds.

  3. Henkin and Hybrid Logic

    DEFF Research Database (Denmark)

    Blackburn, Patrick Rowan; Huertas, Antonia; Manzano, Maria;

    2014-01-01

    Leon Henkin was not a modal logician, but there is a branch of modal logic that has been deeply influenced by his work. That branch is hybrid logic, a family of logics that extend orthodox modal logic with special proposition symbols (called nominals) that name worlds. This paper explains why...... Henkin’s techniques are so important in hybrid logic. We do so by proving a completeness result for a hybrid type theory called HTT, probably the strongest hybrid logic that has yet been explored. Our completeness result builds on earlier work with a system called BHTT, or basic hybrid type theory...... is due to the first-order perspective, which lies at the heart of Henin’s best known work and hybrid logic....

  4. BSA Hybrid Synthesized Polymer

    Institute of Scientific and Technical Information of China (English)

    Zong Bin LIU; Xiao Pei DENG; Chang Sheng ZHAO

    2006-01-01

    Bovine serum albumin (BSA), a naturally occurring biopolymer, was regarded as a polymeric material to graft to an acrylic acid (AA)-N-vinyl pyrrolidone (NVP) copolymer to form a biomacromolecular hybrid polymer. The hybrid polymer can be blended with polyethersulfone (PES) to increase the hydrophilicity of the PES membrane, which suggested that the hybrid polymer might have a wide application in the modification of biomaterials.

  5. Hybrid Action Systems

    DEFF Research Database (Denmark)

    Ronkko, Mauno; Ravn, Anders P.

    1997-01-01

    a differential action, which allows differential equations as primitive actions. The extension allows us to model hybrid systems with both continuous and discrete behaviour. The main result of this paper is an extension of such a hybrid action system with parallel composition. The extension does not change...... the original meaning of the parallel composition, and therefore also the ordinary action systems can be composed in parallel with the hybrid action systems....

  6. HYBRID VEHICLE CONTROL SYSTEM

    Directory of Open Access Journals (Sweden)

    V. Dvadnenko

    2016-06-01

    Full Text Available The hybrid vehicle control system includes a start–stop system for an internal combustion engine. The system works in a hybrid mode and normal vehicle operation. To simplify the start–stop system, there were user new possibilities of a hybrid car, which appeared after the conversion. Results of the circuit design of the proposed system of basic blocks are analyzed.

  7. Nanoscale Organic Hybrid Electrolytes

    KAUST Repository

    Nugent, Jennifer L.

    2010-08-20

    Nanoscale organic hybrid electrolytes are composed of organic-inorganic hybrid nanostructures, each with a metal oxide or metallic nanoparticle core densely grafted with an ion-conducting polyethylene glycol corona - doped with lithium salt. These materials form novel solvent-free hybrid electrolytes that are particle-rich, soft glasses at room temperature; yet manifest high ionic conductivity and good electrochemical stability above 5V. © 2010 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

  8. Hybrid radiator cooling system

    Science.gov (United States)

    France, David M.; Smith, David S.; Yu, Wenhua; Routbort, Jules L.

    2016-03-15

    A method and hybrid radiator-cooling apparatus for implementing enhanced radiator-cooling are provided. The hybrid radiator-cooling apparatus includes an air-side finned surface for air cooling; an elongated vertically extending surface extending outwardly from the air-side finned surface on a downstream air-side of the hybrid radiator; and a water supply for selectively providing evaporative cooling with water flow by gravity on the elongated vertically extending surface.

  9. Shape Memory Composite Hybrid Hinge

    Science.gov (United States)

    Fang, Houfei; Im, Eastwood; Lin, John; Scarborough, Stephen

    2012-01-01

    There are two conventional types of hinges for in-space deployment applications. The first type is mechanically deploying hinges. A typical mechanically deploying hinge is usually composed of several tens of components. It is complicated, heavy, and bulky. More components imply higher deployment failure probability. Due to the existence of relatively moving components among a mechanically deploying hinge, it unavoidably has microdynamic problems. The second type of conventional hinge relies on strain energy for deployment. A tape-spring hinge is a typical strain energy hinge. A fundamental problem of a strain energy hinge is that its deployment dynamic is uncontrollable. Usually, its deployment is associated with a large impact, which is unacceptable for many space applications. Some damping technologies have been experimented with to reduce the impact, but they increased the risks of an unsuccessful deployment. Coalescing strain energy components with shape memory composite (SMC) components to form a hybrid hinge is the solution. SMCs are well suited for deployable structures. A SMC is created from a high-performance fiber and a shape memory polymer resin. When the resin is heated to above its glass transition temperature, the composite becomes flexible and can be folded or packed. Once cooled to below the glass transition temperature, the composite remains in the packed state. When the structure is ready to be deployed, the SMC component is reheated to above the glass transition temperature, and it returns to its as-fabricated shape. A hybrid hinge is composed of two strain energy flanges (also called tape-springs) and one SMC tube. Two folding lines are placed on the SMC tube to avoid excessive strain on the SMC during folding. Two adapters are used to connect the hybrid hinge to its adjacent structural components. While the SMC tube is heated to above its glass transition temperature, a hybrid hinge can be folded and stays at folded status after the temperature

  10. Hybrid Unifying Variable Supernetwork Model

    Institute of Scientific and Technical Information of China (English)

    LIU; Qiang; FANG; Jin-qing; LI; Yong

    2015-01-01

    In order to compare new phenomenon of topology change,evolution,hybrid ratio and network characteristics of unified hybrid network theoretical model with unified hybrid supernetwork model,this paper constructed unified hybrid variable supernetwork model(HUVSM).The first layer introduces a hybrid ratio dr,the

  11. Large Unifying Hybrid Supernetwork Model

    Institute of Scientific and Technical Information of China (English)

    LIU; Qiang; FANG; Jin-qing; LI; Yong

    2015-01-01

    For depicting multi-hybrid process,large unifying hybrid network model(so called LUHNM)has two sub-hybrid ratios except dr.They are deterministic hybrid ratio(so called fd)and random hybrid ratio(so called gr),respectively.

  12. Hybrid Rocket Technology

    National Research Council Canada - National Science Library

    Sankaran Venugopal; K K Rajesh; V Ramanujachari

    2011-01-01

    With their unique operational characteristics, hybrid rockets can potentially provide safer, lower-cost avenues for spacecraft and missiles than the current solid propellant and liquid propellant systems...

  13. Hybrid FOSS Project

    Data.gov (United States)

    National Aeronautics and Space Administration — Armstrong researchers are continuing their efforts to further develop FOSS technologies. A hybrid FOSS technique (HyFOSS) employs conventional continuous grating...

  14. Hybridized Teacher Education Programs in NYC: A Missed Opportunity?

    Science.gov (United States)

    Mungal, Angus Shiva

    2015-01-01

    This qualitative study describes the development of hybrid teacher preparation programs that emerged as a result of a "forced" partnership between university-based and alternative teacher preparation programs in New York City. This hybrid experiment was a short-lived, yet innovative by-product of a somewhat pragmatic arrangement between…

  15. From hybrid swarms to swarms of hybrids

    Science.gov (United States)

    Stohlgren, Thomas J.; Szalanski, Allen L; Gaskin, John F.; Young, Nicholas E.; West, Amanda; Jarnevich, Catherine S.; Tripodi, Amber

    2015-01-01

    Science has shown that the introgression or hybridization of modern humans (Homo sapiens) with Neanderthals up to 40,000 YBP may have led to the swarm of modern humans on earth. However, there is little doubt that modern trade and transportation in support of the humans has continued to introduce additional species, genotypes, and hybrids to every country on the globe. We assessed the utility of species distributions modeling of genotypes to assess the risk of current and future invaders. We evaluated 93 locations of the genus Tamarix for which genetic data were available. Maxent models of habitat suitability showed that the hybrid, T. ramosissima x T. chinensis, was slightly greater than the parent taxa (AUCs > 0.83). General linear models of Africanized honey bees, a hybrid cross of Tanzanian Apis mellifera scutellata and a variety of European honey bee including A. m. ligustica, showed that the Africanized bees (AUC = 0.81) may be displacing European honey bees (AUC > 0.76) over large areas of the southwestern U.S. More important, Maxent modeling of sub-populations (A1 and A26 mitotypes based on mDNA) could be accurately modeled (AUC > 0.9), and they responded differently to environmental drivers. This suggests that rapid evolutionary change may be underway in the Africanized bees, allowing the bees to spread into new areas and extending their total range. Protecting native species and ecosystems may benefit from risk maps of harmful invasive species, hybrids, and genotypes.

  16. A simple genetic incompatibility causes hybrid male sterility in mimulus.

    Science.gov (United States)

    Sweigart, Andrea L; Fishman, Lila; Willis, John H

    2006-04-01

    Much evidence has shown that postzygotic reproductive isolation (hybrid inviability or sterility) evolves by the accumulation of interlocus incompatibilities between diverging populations. Although in theory only a single pair of incompatible loci is needed to isolate species, empirical work in Drosophila has revealed that hybrid fertility problems often are highly polygenic and complex. In this article we investigate the genetic basis of hybrid sterility between two closely related species of monkeyflower, Mimulus guttatus and M. nasutus. In striking contrast to Drosophila systems, we demonstrate that nearly complete hybrid male sterility in Mimulus results from a simple genetic incompatibility between a single pair of heterospecific loci. We have genetically mapped this sterility effect: the M. guttatus allele at the hybrid male sterility 1 (hms1) locus acts dominantly in combination with recessive M. nasutus alleles at the hybrid male sterility 2 (hms2) locus to cause nearly complete hybrid male sterility. In a preliminary screen to find additional small-effect male sterility factors, we identified one additional locus that also contributes to some of the variation in hybrid male fertility. Interestingly, hms1 and hms2 also cause a significant reduction in hybrid female fertility, suggesting that sex-specific hybrid defects might share a common genetic basis. This possibility is supported by our discovery that recombination is reduced dramatically in a cross involving a parent with the hms1-hms2 incompatibility.

  17. [Comparative molecular cytogenetic characterization of partial wheat-wheatgrass hybrids].

    Science.gov (United States)

    Krupin, P Yu; Divashuk, M G; Belov, V I; Glukhova, L I; Aleksandrov, O S; Karlov, G I

    2011-04-01

    The chromosomal composition of the Zernokormovaya 169, Istra 1, Ostankinskaya, and Otrastayushchaya 38 cultivars of octoploid partial wheat-wheatgrass hybrids was studied using genomic in situ hybridization (GISH). Differentiation of wheatgrass chromosomes by the distribution of the GISH signal along the chromosome was revealed. The wheatgrass chromosomes of the hybrid cultivars studied in the work differed in the type of differentiation, centromeric index, and absolute size. The cytogenetic distinctions of these chromosomes revealed by us can be used in making crosses and in studying the transmission through gametes of additional wheatgrass chromosomes.

  18. Enhancement of the Hydrogen Evolution Reaction from Ni-MoS2 Hybrid Nanoclusters

    Science.gov (United States)

    2016-01-01

    This report focuses on a novel strategy for the preparation of transition metal–MoS2 hybrid nanoclusters based on a one-step, dual-target magnetron sputtering, and gas condensation process demonstrated for Ni-MoS2. Aberration-corrected STEM images coupled with EDX analysis confirms the presence of Ni and MoS2 in the hybrid nanoclusters (average diameter = 5.0 nm, Mo:S ratio = 1:1.8 ± 0.1). The Ni-MoS2 nanoclusters display a 100 mV shift in the hydrogen evolution reaction (HER) onset potential and an almost 3-fold increase in exchange current density compared with the undoped MoS2 nanoclusters, the latter effect in agreement with reported DFT calculations. This activity is only reached after air exposure of the Ni-MoS2 hybrid nanoclusters, suggested by XPS measurements to originate from a Ni dopant atoms oxidation state conversion from metallic to 2+ characteristic of the NiO species active to the HER. Anodic stripping voltammetry (ASV) experiments on the Ni-MoS2 hybrid nanoclusters confirm the presence of Ni-doped edge sites and reveal distinctive electrochemical features associated with both doped Mo-edge and doped S-edge sites which correlate with both their thermodynamic stability and relative abundance.

  19. Hybrid gels assembled from Fmoc-amino acid and graphene oxide with controllable properties.

    Science.gov (United States)

    Xing, Pengyao; Chu, Xiaoxiao; Li, Shangyang; Ma, Mingfang; Hao, Aiyou

    2014-08-04

    A supramolecular gel is obtained from the self-assembly of an ultralow-molecular-weight gelator (N-fluorenyl-9-methoxycarbonyl glutamic acid) in good and poor solvents. The gelators can self-assemble into a lamellar structure, which can further form twisted fibers and nanotubes in the gel phase. Rheological studies show that the gels are robust and rigid, and are able to rapidly self-recover to a gel after being destroyed by shear force. Fluorescence experiments reveal the aggregation-induced emission effects of the gel system; the fluorescence intensity is significantly enhanced by gel formation. Graphene oxide (GO) is introduced into the system efficiently to give a hybrid material, and the interaction between gelators-GO sheets is studied. Rheological and fluorescent studies imply that the mechanical properties and the fluorescent emission of the hybrid materials can be fine-tuned by controlling the addition of GO.

  20. Higher-order spin and charge dynamics in a quantum dot-lead hybrid system.

    Science.gov (United States)

    Otsuka, Tomohiro; Nakajima, Takashi; Delbecq, Matthieu R; Amaha, Shinichi; Yoneda, Jun; Takeda, Kenta; Allison, Giles; Stano, Peter; Noiri, Akito; Ito, Takumi; Loss, Daniel; Ludwig, Arne; Wieck, Andreas D; Tarucha, Seigo

    2017-09-22

    Understanding the dynamics of open quantum systems is important and challenging in basic physics and applications for quantum devices and quantum computing. Semiconductor quantum dots offer a good platform to explore the physics of open quantum systems because we can tune parameters including the coupling to the environment or leads. Here, we apply the fast single-shot measurement techniques from spin qubit experiments to explore the spin and charge dynamics due to tunnel coupling to a lead in a quantum dot-lead hybrid system. We experimentally observe both spin and charge time evolution via first- and second-order tunneling processes, and reveal the dynamics of the spin-flip through the intermediate state. These results enable and stimulate the exploration of spin dynamics in dot-lead hybrid systems, and may offer useful resources for spin manipulation and simulation of open quantum systems.

  1. The hybrid BCI system for movement control by combining motor imagery and moving onset visual evoked potential

    Science.gov (United States)

    Ma, Teng; Li, Hui; Deng, Lili; Yang, Hao; Lv, Xulin; Li, Peiyang; Li, Fali; Zhang, Rui; Liu, Tiejun; Yao, Dezhong; Xu, Peng

    2017-04-01

    Objective. Movement control is an important application for EEG-BCI (EEG-based brain-computer interface) systems. A single-modality BCI cannot provide an efficient and natural control strategy, but a hybrid BCI system that combines two or more different tasks can effectively overcome the drawbacks encountered in single-modality BCI control. Approach. In the current paper, we developed a new hybrid BCI system by combining MI (motor imagery) and mVEP (motion-onset visual evoked potential), aiming to realize the more efficient 2D movement control of a cursor. Main result. The offline analysis demonstrates that the hybrid BCI system proposed in this paper could evoke the desired MI and mVEP signal features simultaneously, and both are very close to those evoked in the single-modality BCI task. Furthermore, the online 2D movement control experiment reveals that the proposed hybrid BCI system could provide more efficient and natural control commands. Significance. The proposed hybrid BCI system is compensative to realize efficient 2D movement control for a practical online system, especially for those situations in which P300 stimuli are not suitable to be applied.

  2. Bucking the trend in wolf-dog hybridization: first evidence from europe of hybridization between female dogs and male wolves.

    Science.gov (United States)

    Hindrikson, Maris; Männil, Peep; Ozolins, Janis; Krzywinski, Andrzej; Saarma, Urmas

    2012-01-01

    Studies on hybridization have proved critical for understanding key evolutionary processes such as speciation and adaptation. However, from the perspective of conservation, hybridization poses a concern, as it can threaten the integrity and fitness of many wild species, including canids. As a result of habitat fragmentation and extensive hunting pressure, gray wolf (Canis lupus) populations have declined dramatically in Europe and elsewhere during recent centuries. Small and fragmented populations have persisted, but often only in the presence of large numbers of dogs, which increase the potential for hybridization and introgression to deleteriously affect wolf populations. Here, we demonstrate hybridization between wolf and dog populations in Estonia and Latvia, and the role of both genders in the hybridization process, using combined analysis of maternal, paternal and biparental genetic markers. Eight animals exhibiting unusual external characteristics for wolves - six from Estonia and two from Latvia - proved to be wolf-dog hybrids. However, one of the hybridization events was extraordinary. Previous field observations and genetic studies have indicated that mating between wolves and dogs is sexually asymmetrical, occurring predominantly between female wolves and male dogs. While this was also the case among the Estonian hybrids, our data revealed the existence of dog mitochondrial genomes in the Latvian hybrids and, together with Y chromosome and autosomal microsatellite data, thus provided the first evidence from Europe of mating between male wolves and female dogs. We discuss patterns of sexual asymmetry in wolf-dog hybridization.

  3. Hybrid manifold embedding.

    Science.gov (United States)

    Liu, Yang; Liu, Yan; Chan, Keith C C; Hua, Kien A

    2014-12-01

    In this brief, we present a novel supervised manifold learning framework dubbed hybrid manifold embedding (HyME). Unlike most of the existing supervised manifold learning algorithms that give linear explicit mapping functions, the HyME aims to provide a more general nonlinear explicit mapping function by performing a two-layer learning procedure. In the first layer, a new clustering strategy called geodesic clustering is proposed to divide the original data set into several subsets with minimum nonlinearity. In the second layer, a supervised dimensionality reduction scheme called locally conjugate discriminant projection is performed on each subset for maximizing the discriminant information and minimizing the dimension redundancy simultaneously in the reduced low-dimensional space. By integrating these two layers in a unified mapping function, a supervised manifold embedding framework is established to describe both global and local manifold structure as well as to preserve the discriminative ability in the learned subspace. Experiments on various data sets validate the effectiveness of the proposed method.

  4. Cardiac hybrid imaging

    Energy Technology Data Exchange (ETDEWEB)

    Gaemperli, Oliver [University Hospital Zurich, Cardiac Imaging, Zurich (Switzerland); University Hospital Zurich, Nuclear Cardiology, Cardiovascular Center, Zurich (Switzerland); Kaufmann, Philipp A. [University Hospital Zurich, Cardiac Imaging, Zurich (Switzerland); Alkadhi, Hatem [University Hospital Zurich, Institute of Diagnostic and Interventional Radiology, Zurich (Switzerland)

    2014-05-15

    Hybrid cardiac single photon emission computed tomography (SPECT)/CT imaging allows combined assessment of anatomical and functional aspects of cardiac disease. In coronary artery disease (CAD), hybrid SPECT/CT imaging allows detection of coronary artery stenosis and myocardial perfusion abnormalities. The clinical value of hybrid imaging has been documented in several subsets of patients. In selected groups of patients, hybrid imaging improves the diagnostic accuracy to detect CAD compared to the single imaging techniques. Additionally, this approach facilitates functional interrogation of coronary stenoses and guidance with regard to revascularization procedures. Moreover, the anatomical information obtained from CT coronary angiography or coronary artery calcium scores (CACS) adds prognostic information over perfusion data from SPECT. The use of cardiac hybrid imaging has been favoured by the dissemination of dedicated hybrid systems and the release of dedicated image fusion software, which allow simple patient throughput for hybrid SPECT/CT studies. Further technological improvements such as more efficient detector technology to allow for low-radiation protocols, ultra-fast image acquisition and improved low-noise image reconstruction algorithms will be instrumental to further promote hybrid SPECT/CT in research and clinical practice. (orig.)

  5. Hybrid intelligent engineering systems

    CERN Document Server

    Jain, L C; Adelaide, Australia University of

    1997-01-01

    This book on hybrid intelligent engineering systems is unique, in the sense that it presents the integration of expert systems, neural networks, fuzzy systems, genetic algorithms, and chaos engineering. It shows that these new techniques enhance the capabilities of one another. A number of hybrid systems for solving engineering problems are presented.

  6. A Hybrid Imagination

    DEFF Research Database (Denmark)

    Jamison, Andrew; Christensen, Steen Hyldgaard; Botin, Lars

    contexts, or sites, for mixing scientific knowledge and technical skills from different fields and social domains into new combinations, thus fostering what the authors term a “hybrid imagination”. Such a hybrid imagination is especially important today, as a way to counter the competitive and commercial...

  7. Hybrid trajectory spaces

    NARCIS (Netherlands)

    Collins, P.J.

    2005-01-01

    In this paper, we present a general framework for describing and studying hybrid systems. We represent the trajectories of the system as functions on a hybrid time domain, and the system itself by its trajectory space, which is the set of all possible trajectories. The trajectory space is given a na

  8. Editorial: Hybrid Systems

    DEFF Research Database (Denmark)

    Olderog, Ernst-Rüdiger; Ravn, Anders Peter

    2007-01-01

    An introduction to three papers in a special issue on Hybrid Systems. These paper were first presented at an IFIP WG 2.2 meeting in Skagen 2005.......An introduction to three papers in a special issue on Hybrid Systems. These paper were first presented at an IFIP WG 2.2 meeting in Skagen 2005....

  9. 压电气体混合驱动式喷射点胶阀的设计与实验%Design and experiment for the piezoelectric-gas hybrid driven jet dispensing valve

    Institute of Scientific and Technical Information of China (English)

    焦晓阳; 刘建芳; 丁宁宁; 路崧

    2013-01-01

    Considering that the piezoelectric materials can be used for jet dispensing and can be widely applied in microelectronics packaging, a new type of piezoelectric/gas hybrid driven non-contact jet dispensing valve has been developed. This paper expounds upon the working principles of the valve, and uses FLUENT dynamic grid technol-ogy to analyze the relationship between the valve rod stroke and the glue solution to realize dispensing. Through the experiment, the factors which affect the dispensing quality of this valve were obtained. The 5 000 mPa·s high vis-cosity epoxy resin glue dispensing was realized with tungsten steel which has a nozzle diameter of 0.3 mm which was selected. The results show that the minimum diameter of the glue dot is 0.5 mm, dispensing frequency reaches 120 Hz, and the consistent error rate of the glue dot is under 5%.%为了实现压电喷射点胶,使压电喷射技术能广泛地应用到电子封装产业中,设计了一种压电/气体混合驱动式非接触喷射点胶阀.介绍了该点胶阀的工作原理,利用FLUENT动网格技术分析了阀杆行程与胶液实现喷射的关系,通过实验得到了影响点胶阀点胶质量的因素.实验选用直径为0.3 mm的钨钢喷嘴,实现了5000 mPa·s中高粘度环氧树脂胶结剂的喷射点胶,获得胶点最小直径为0.5 mm,点胶频率可达120 Hz,胶点一致性误差在5%以内.

  10. Hybrid nanoantennas for directional emission enhancement

    Energy Technology Data Exchange (ETDEWEB)

    Rusak, Evgenia; Staude, Isabelle, E-mail: isabelle.staude@anu.edu.au; Decker, Manuel; Sautter, Jürgen; Miroshnichenko, Andrey E.; Powell, David A.; Neshev, Dragomir N.; Kivshar, Yuri S. [Nonlinear Physics Centre and Centre for Ultrahigh Bandwidth Devices for Optical Systems (CUDOS), Research School of Physics and Engineering, The Australian National University, Canberra, ACT 2601 (Australia)

    2014-12-01

    Plasmonic and dielectric nanoparticles offer complementary strengths regarding their use as optical antenna elements. While plasmonic nanoparticles are well-known to provide strong decay rate enhancement for localized emitters, all-dielectric nanoparticles can enable high directivity combined with low losses. Here, we suggest a hybrid metal-dielectric nanoantenna consisting of a gold nanorod and a silicon nanodisk, which combines all these advantages. Our numerical analysis reveals a giant enhancement of directional emission together with simultaneously high radiation efficiency (exceeding 70%). The suggested hybrid nanoantenna has a subwavelength footprint, and all parameters and materials are chosen to be compatible with fabrication by two-step electron-beam lithography.

  11. Hybrid reactors. [Fuel cycle

    Energy Technology Data Exchange (ETDEWEB)

    Moir, R.W.

    1980-09-09

    The rationale for hybrid fusion-fission reactors is the production of fissile fuel for fission reactors. A new class of reactor, the fission-suppressed hybrid promises unusually good safety features as well as the ability to support 25 light-water reactors of the same nuclear power rating, or even more high-conversion-ratio reactors such as the heavy-water type. One 4000-MW nuclear hybrid can produce 7200 kg of /sup 233/U per year. To obtain good economics, injector efficiency times plasma gain (eta/sub i/Q) should be greater than 2, the wall load should be greater than 1 MW.m/sup -2/, and the hybrid should cost less than 6 times the cost of a light-water reactor. Introduction rates for the fission-suppressed hybrid are usually rapid.

  12. Hybrid propulsion technology program

    Science.gov (United States)

    1990-01-01

    Technology was identified which will enable application of hybrid propulsion to manned and unmanned space launch vehicles. Two design concepts are proposed. The first is a hybrid propulsion system using the classical method of regression (classical hybrid) resulting from the flow of oxidizer across a fuel grain surface. The second system uses a self-sustaining gas generator (gas generator hybrid) to produce a fuel rich exhaust that was mixed with oxidizer in a separate combustor. Both systems offer cost and reliability improvement over the existing solid rocket booster and proposed liquid boosters. The designs were evaluated using life cycle cost and reliability. The program consisted of: (1) identification and evaluation of candidate oxidizers and fuels; (2) preliminary evaluation of booster design concepts; (3) preparation of a detailed point design including life cycle costs and reliability analyses; (4) identification of those hybrid specific technologies needing improvement; and (5) preperation of a technology acquisition plan and large scale demonstration plan.

  13. Backstepping and sliding mode control hybridized for a prosthetic hand.

    Science.gov (United States)

    Engeberg, Erik D; Meek, Sanford G

    2009-02-01

    Open loop and force controllers are compared experimentally with three robust parallel force-velocity controllers that are developed for a prosthetic hand. Robust sliding mode, backstepping, and hybrid sliding mode-backstepping (HSMBS) parallel force-velocity controllers are tested by ten able-bodied subjects. Results obtained with a myoelectrically controlled prosthesis indicate that all three robust controllers offer a statistically significant improvement over linear hand prosthesis control schemes. The robust controllers enable the human operators to more easily manipulate a delicate object. Bench top experiments combined with quantitative and qualitative evaluations from ten test subjects reveal the HSMBS controller to be the best choice to improve control of powered prosthetic hands.

  14. Resistance of sunflower hybrids to imazamox and tribenuron-methyl

    DEFF Research Database (Denmark)

    Bozic, D; Saric, M; Malidza, G;

    2012-01-01

    The response of the imazamox resistant and susceptible sunflower hybrids Rimi and S to imazamox and of tribenuron-methyl resistant and susceptible hybrids Rsu and S to tribenuron-methyl was investigated both in a whole-plant bioassay and in field experiments. Plants were treated post...... concentrations was determined in vitro. Pronounced differences were noted between Rimi and S hybrids and between Rsu and S hybrids in the vegetative parameters and ALS activity. Namely, Rimi hybrid was 9e64-fold more resistant than S for vegetative parameters and about 3000-fold for ALS activity, while Rsu...... hybrid was 14e56-fold more resistant than S for vegetative parameters, and about 2600-fold for ALS activity....

  15. Intelligent Control Scheme of Engineering Machinery of Cluster Hybrid System

    Institute of Scientific and Technical Information of China (English)

    GAO Qiang; WANG Hongli

    2005-01-01

    In a hybrid system, the subsystems with discrete dynamics play a central role in a hybrid system. In the course of engineering machinery of cluster construction, the discrete control law is hard to obtain because the construction environment is complex and there exist many affecting factors. In this paper, hierarchically intelligent control, expert control and fuzzy control are introduced into the discrete subsystems of engineering machinery of cluster hybrid system, so as to rebuild the hybrid system and make the discrete control law easily and effectively obtained. The structures, reasoning mechanism and arithmetic of intelligent control are replanted to discrete dynamic, conti-nuous process and the interface of the hybrid system. The structures of three types of intelligent hybrid system are presented and the human experiences summarized from engineering machinery of cluster are taken into account.

  16. Hybrid recreation by reverse breeding in Arabidopsis thaliana.

    Science.gov (United States)

    Wijnker, Erik; Deurhof, Laurens; van de Belt, Jose; de Snoo, C Bastiaan; Blankestijn, Hetty; Becker, Frank; Ravi, Maruthachalam; Chan, Simon W L; van Dun, Kees; Lelivelt, Cilia L C; de Jong, Hans; Dirks, Rob; Keurentjes, Joost J B

    2014-04-01

    Hybrid crop varieties are traditionally produced by selecting and crossing parental lines to evaluate hybrid performance. Reverse breeding allows doing the opposite: selecting uncharacterized heterozygotes and generating parental lines from them. With these, the selected heterozygotes can be recreated as F1 hybrids, greatly increasing the number of hybrids that can be screened in breeding programs. Key to reverse breeding is the suppression of meiotic crossovers in a hybrid plant to ensure the transmission of nonrecombinant chromosomes to haploid gametes. These gametes are subsequently regenerated as doubled-haploid (DH) offspring. Each DH carries combinations of its parental chromosomes, and complementing pairs can be crossed to reconstitute the initial hybrid. Achiasmatic meiosis and haploid generation result in uncommon phenotypes among offspring owing to chromosome number variation. We describe how these features can be dealt with during a reverse-breeding experiment, which can be completed in six generations (∼1 year).

  17. CURE-SMOTE algorithm and hybrid algorithm for feature selection and parameter optimization based on random forests.

    Science.gov (United States)

    Ma, Li; Fan, Suohai

    2017-03-14

    The random forests algorithm is a type of classifier with prominent universality, a wide application range, and robustness for avoiding overfitting. But there are still some drawbacks to random forests. Therefore, to improve the performance of random forests, this paper seeks to improve imbalanced data processing, feature selection and parameter optimization. We propose the CURE-SMOTE algorithm for the imbalanced data classification problem. Experiments on imbalanced UCI data reveal that the combination of Clustering Using Representatives (CURE) enhances the original synthetic minority oversampling technique (SMOTE) algorithms effectively compared with the classification results on the original data using random sampling, Borderline-SMOTE1, safe-level SMOTE, C-SMOTE, and k-means-SMOTE. Additionally, the hybrid RF (random forests) algorithm has been proposed for feature selection and parameter optimization, which uses the minimum out of bag (OOB) data error as its objective function. Simulation results on binary and higher-dimensional data indicate that the proposed hybrid RF algorithms, hybrid genetic-random forests algorithm, hybrid particle swarm-random forests algorithm and hybrid fish swarm-random forests algorithm can achieve the minimum OOB error and show the best generalization ability. The training set produced from the proposed CURE-SMOTE algorithm is closer to the original data distribution because it contains minimal noise. Thus, better classification results are produced from this feasible and effective algorithm. Moreover, the hybrid algorithm's F-value, G-mean, AUC and OOB scores demonstrate that they surpass the performance of the original RF algorithm. Hence, this hybrid algorithm provides a new way to perform feature selection and parameter optimization.

  18. Research on Modulation Strategies Based on Multilevel Inverter Universal Hybrid Topology

    Institute of Scientific and Technical Information of China (English)

    Zhou Jinghua; Su Yanmin; Shen Chuanwen; Zhang Lin

    2005-01-01

    Based on multi-module-cascaded inverter topology, this study presented a universal multilevel inverter hybrid topology and unified the researches on multilevel inverter topology. According to the freedom of this universal topology, several new hybrid topologies were constructed. Also, based on conventional modulation strategies- multi-carrier SPWM (Sinusoidal Pulse Width Modulation), hybrid modulation strategies were introduced corresponding to hybrid topologies, and a multilevel SVPWM (Space Vector Pulse Width Modulation) technique based on phase-shifted theory was naturally produced. Simulation and experiment results prove that hybrid topologies and corresponding modulation strategies are valid, which lay a foundation for practical application of hybrid multilevel inverter topologies.

  19. Cultivating Curiosity: Integrating Hybrid Teaching in Courses in Human Behavior in the Social Environment

    Science.gov (United States)

    Rodriguez-Keyes, Elizabeth; Schneider, Dana A.

    2013-01-01

    This study illustrates an experience of implementing a hybrid model for teaching human behavior in the social environment in an urban university setting. Developing a hybrid model in a BSW program arose out of a desire to reach students in a different way. Designed to promote curiosity and active learning, this particular hybrid model has students…

  20. Vegetative propagation of Alstroemeria hybrids in vitro.

    NARCIS (Netherlands)

    Pierik, R.L.M.; Voorst, van A.; Booy, G.; Acker, van C.A.M.; Lelivelt, C.L.C.; Wit, de J.C.

    1988-01-01

    Terminal and lateral tips from fleshy rhizomes of Alstroemeria hybrids were isolated in vitro and induced to form a new rhizome. The cultivar Toledo was used in most experiments, but later other cultivars were also tested. The basic culture medium for rhizome isolation and for rhizome multiplication

  1. Vegetative propagation of Alstroemeria hybrids in vitro.

    NARCIS (Netherlands)

    Pierik, R.L.M.; Voorst, van A.; Booy, G.; Acker, van C.A.M.; Lelivelt, C.L.C.; Wit, de J.C.

    1988-01-01

    Terminal and lateral tips from fleshy rhizomes of Alstroemeria hybrids were isolated in vitro and induced to form a new rhizome. The cultivar Toledo was used in most experiments, but later other cultivars were also tested. The basic culture medium for rhizome isolation and for rhizome multiplication

  2. NextFlex Flexible Hybrid Electronics Manufacturing

    Science.gov (United States)

    2016-10-01

    and innovators, along with a robust U.S. network of manufacturing nodes, to advance a national flexible hybrid electronics (FHE) manufacturing...methods to scale up today’s FHE laboratory experiments into smart , affordable products. FHE manufacturing en- compasses innovative electronic...The software design tools will encompass multiphysics simulation (e.g., electrical , thermal, mechanical, etc., interactions based on first principles

  3. Analysis and design of hybrid control systems

    Energy Technology Data Exchange (ETDEWEB)

    Malmborg, J.

    1998-05-01

    Different aspects of hybrid control systems are treated: analysis, simulation, design and implementation. A systematic methodology using extended Lyapunov theory for design of hybrid systems is developed. The methodology is based on conventional control designs in separate regions together with a switching strategy. Dynamics are not well defined if the control design methods lead to fast mode switching. The dynamics depend on the salient features of the implementation of the mode switches. A theorem for the stability of second order switching together with the resulting dynamics is derived. The dynamics on an intersection of two sliding sets are defined for two relays working on different time scales. The current simulation packages have problems modeling and simulating hybrid systems. It is shown how fast mode switches can be found before or during simulation. The necessary analysis work is a very small overhead for a modern simulation tool. To get some experience from practical problems with hybrid control the switching strategy is implemented in two different software environments. In one of them a time-optimal controller is added to an existing PID controller on a commercial control system. Successful experiments with this hybrid controller shows the practical use of the method 78 refs, 51 figs, 2 tabs

  4. Extreme Environments Facilitate Hybrid Superiority – The Story of a Successful Daphnia galeata × longispina Hybrid Clone

    Science.gov (United States)

    Griebel, Johanna; Gießler, Sabine; Poxleitner, Monika; Navas Faria, Amanda; Yin, Mingbo; Wolinska, Justyna

    2015-01-01

    Hybridization within the animal kingdom has long been underestimated. Hybrids have often been considered less fit than their parental species. In the present study, we observed that the Daphnia community of a small lake was dominated by a single D. galeata × D. longispina hybrid clone, during two consecutive years. Notably, in artificial community set-ups consisting of several clones representing parental species and other hybrids, this hybrid clone took over within about ten generations. Neither the fitness assay conducted under different temperatures, or under crowded and non-crowded environments, nor the carrying capacity test revealed any outstanding life history parameters of this hybrid clone. However, under simulated winter conditions (i.e. low temperature, food and light), the hybrid clone eventually showed a higher survival probability and higher fecundity compared to parental species. Hybrid superiority in cold-adapted traits leading to an advantage of overwintering as parthenogenetic lineages might consequently explain the establishment of successful hybrids in natural communities of the D. longispina complex. In extreme cases, like the one reported here, a superior hybrid genotype might be the only clone alive after cold winters. Overall, superiority traits, such as enhanced overwintering here, might explain hybrid dominance in nature, especially in extreme and rapidly changing environments. Although any favoured gene complex in cyclic parthenogens could be frozen in successful clones independent of hybridization, we did not find similarly successful clones among parental species. We conclude that the emergence of the observed trait is linked to the production of novel recombined hybrid genotypes. PMID:26448651

  5. Hybrid male sterility and genome-wide misexpression of male reproductive proteases.

    Science.gov (United States)

    Gomes, Suzanne; Civetta, Alberto

    2015-07-06

    Hybrid male sterility is a common barrier to gene flow between species. Previous studies have posited a link between misregulation of spermatogenesis genes in interspecies hybrids and sterility. However, in the absence of fully fertile control hybrids, it is impossible to differentiate between misregulation associated with sterility vs. fast male gene regulatory evolution. Here, we differentiate between these two possibilities using a D. pseudoobscura species pair that experiences unidirectional hybrid sterility. We identify genes uniquely misexpressed in sterile hybrid male reproductive tracts via RNA-seq. The sterile male hybrids had more misregulated and more over or under expressed genes relative to parental species than the fertile male hybrids. Proteases were the only gene ontology class overrepresented among uniquely misexpressed genes, with four located within a previously identified hybrid male sterility locus. This result highlights the potential role of a previously unexplored class of genes in interspecific hybrid male sterility and speciation.

  6. Design, analysis and modeling of a novel hybrid powertrain system based on hybridized automated manual transmission

    Science.gov (United States)

    Wu, Guang; Dong, Zuomin

    2017-09-01

    Hybrid electric vehicles are widely accepted as a promising short to mid-term technical solution due to noticeably improved efficiency and lower emissions at competitive costs. In recent years, various hybrid powertrain systems were proposed and implemented based on different types of conventional transmission. Power-split system, including Toyota Hybrid System and Ford Hybrid System, are well-known examples. However, their relatively low torque capacity, and the drive of alternative and more advanced designs encouraged other innovative hybrid system designs. In this work, a new type of hybrid powertrain system based hybridized automated manual transmission (HAMT) is proposed. By using the concept of torque gap filler (TGF), this new hybrid powertrain type has the potential to overcome issue of torque gap during gearshift. The HAMT design (patent pending) is described in details, from gear layout and design of gear ratios (EV mode and HEV mode) to torque paths at different gears. As an analytical tool, mutli-body model of vehicle equipped with this HAMT was built to analyze powertrain dynamics at various steady and transient modes. A gearshift was decomposed and analyzed based basic modes. Furthermore, a Simulink-SimDriveline hybrid vehicle model was built for the new transmission, driveline and vehicle modular. Control strategy has also been built to harmonically coordinate different powertrain components to realize TGF function. A vehicle launch simulation test has been completed under 30% of accelerator pedal position to reveal details during gearshift. Simulation results showed that this HAMT can eliminate most torque gap that has been persistent issue of traditional AMT, improving both drivability and performance. This work demonstrated a new type of transmission that features high torque capacity, high efficiency and improved drivability.

  7. A hybrid PSO-SVM-based method for predicting the friction coefficient between aircraft tire and coating

    Science.gov (United States)

    Zhan, Liwei; Li, Chengwei

    2017-02-01

    A hybrid PSO-SVM-based model is proposed to predict the friction coefficient between aircraft tire and coating. The presented hybrid model combines a support vector machine (SVM) with particle swarm optimization (PSO) technique. SVM has been adopted to solve regression problems successfully. Its regression accuracy is greatly related to optimizing parameters such as the regularization constant C , the parameter gamma γ corresponding to RBF kernel and the epsilon parameter \\varepsilon in the SVM training procedure. However, the friction coefficient which is predicted based on SVM has yet to be explored between aircraft tire and coating. The experiment reveals that drop height and tire rotational speed are the factors affecting friction coefficient. Bearing in mind, the friction coefficient can been predicted using the hybrid PSO-SVM-based model by the measured friction coefficient between aircraft tire and coating. To compare regression accuracy, a grid search (GS) method and a genetic algorithm (GA) are used to optimize the relevant parameters (C , γ and \\varepsilon ), respectively. The regression accuracy could be reflected by the coefficient of determination ({{R}2} ). The result shows that the hybrid PSO-RBF-SVM-based model has better accuracy compared with the GS-RBF-SVM- and GA-RBF-SVM-based models. The agreement of this model (PSO-RBF-SVM) with experiment data confirms its good performance.

  8. 磁力调频压电电磁复合发电设计与实验%Design and experiment of piezoelectric electromagnetic hybrid broadband generator with magnetic force tuning

    Institute of Scientific and Technical Information of China (English)

    杜小振; 张龙波; 于红

    2016-01-01

    开展了基于环境振动发电作为微电源弥补传统化学电池供能缺陷的研究。基于非线性磁力调频开发了低宽频振动能采集压电电磁复合发电系统。介绍了发电装置工作原理;利用 ANSYS 和 Ansoft Maxwell 有限元分析软件仿真分析了压电和电磁发电的输出特性;最后,搭建了压电电磁复合宽频发电装置实验测试系统,测试了发电系统在磁力自调过程中的输出特性。实验结果显示:复合发电系统在谐振频率60 Hz 时输出开路电压峰值为5.8 V ,高于压电系统(5.5 V)和电磁系统(410 mV)独立发电的开路电压峰值。施加磁力拓宽装置后,当压电悬臂梁沿竖直方向上下移动0~15 mm 时,系统适应谐振频带拓宽为45~76 Hz ;悬臂梁沿水平方向平移0~30 mm 时,谐振频带拓宽为51~70 Hz 。结果表明仿真分析与实验测试结果吻合很好。该宽频带能量采集技术可用于低频振动环境的能量采集,可在频变环境中为微型低功耗系统提供低电能。%This paper focuses on environmental vibration energy harvesting generator to provide low energy for a micro low-power system . A piezoelectric electromagnetic hybrid broadband power generator was developed based on nonlinear magnetic force tuning . The working principle of the power generator was introduced ,and its output power characteristics by the piezoelectric system and electromagnetic system were respectively simulated with the software of ANSYS and Ansoft Maxwell . Then ,an experiment system was set up to test the output power characteristics of the power generator with the magnetic force tuning .Experimental results indicate that the peak output open voltage from the power generator is 5 .8 V at the resonance frequency of 60 Hz ,which is higher than that of the piezoelectric system (5 .5 V)and the electromagnetic system (410 mV)independently .When the natural frequency is adjusted with the

  9. 桑枝叶混合青贮饲料饲喂杂交肉羊育肥效果试验%Experiment on the Fattening Effects of Hybrid Mutton Sheep with Feeding Mulberry Leaves and Silage

    Institute of Scientific and Technical Information of China (English)

    刘自新; 梅宁安; 赵晖; 潘文权; 包玉珍

    2014-01-01

    The effects of mixed feed of mulberry leaves and silage on the production performance of hybrid mutton sheep of Tan Sheep and Small-tailed Han Sheep were studied. And its feasibility in the production was explored. 26 hybrid mutton sheep of Tan Sheep and Small-tailed Han Sheep were divided into two groups (with 13 hybrid mutton sheep in each group) . The hybrid mutton sheep in test group was fed with mixed silage. And the hybrid mutton sheep in control group was fed with whole plant corn silage. The results showed that the average daily gain of hybrid mutton sheep in test group was increased by 9.2%than that in control group (P<0.05). And the feed-meat ratio in test group was decreased by 6.98%(P<0.05). The average weight gain during 30 days increased 7.75 yuan gross profit, and the amplitude was 16.32%. The research indicated that it was feasible to mix mulberry leaves with silage in the production and it could significantly enhance the production performance of hybrid fattening mutton sheep.%试验研究了桑枝叶混合青贮饲料对滩寒杂交肉羊生产性能的影响,并探索了其在生产中的可行性。选择滩寒杂交育肥肉羊26只,分为2个组,每组13只,试验组饲喂混合青贮,对照组饲喂全株玉米青贮。试验结果表明,试验组比对照组只均日增重提高9.2%(P<0.05),料肉比降低6.98%(P<0.05),30 d只均日增重可提高毛利7.75元,增幅为16.32%。研究表明,桑枝叶混合青贮饲料在生产中是可行的,并且能显著提高肉用杂交育肥羊生产性能。

  10. Phase reduction theory for hybrid nonlinear oscillators

    Science.gov (United States)

    Shirasaka, Sho; Kurebayashi, Wataru; Nakao, Hiroya

    2017-01-01

    Hybrid dynamical systems characterized by discrete switching of smooth dynamics have been used to model various rhythmic phenomena. However, the phase reduction theory, a fundamental framework for analyzing the synchronization of limit-cycle oscillations in rhythmic systems, has mostly been restricted to smooth dynamical systems. Here we develop a general phase reduction theory for weakly perturbed limit cycles in hybrid dynamical systems that facilitates analysis, control, and optimization of nonlinear oscillators whose smooth models are unavailable or intractable. On the basis of the generalized theory, we analyze injection locking of hybrid limit-cycle oscillators by periodic forcing and reveal their characteristic synchronization properties, such as ultrafast and robust entrainment to the periodic forcing and logarithmic scaling at the synchronization transition. We also illustrate the theory by analyzing the synchronization dynamics of a simple physical model of biped locomotion.

  11. Hybrid electric vehicles TOPTEC

    Energy Technology Data Exchange (ETDEWEB)

    NONE

    1994-06-21

    This one-day TOPTEC session began with an overview of hybrid electric vehicle technology. Updates were given on alternative types of energy storage, APU control for low emissions, simulation programs, and industry and government activities. The keynote speech was about battery technology, a key element to the success of hybrids. The TOPEC concluded with a panel discussion on the mission of hybrid electric vehicles, with a perspective from industry and government experts from United States and Canada on their view of the role of this technology.

  12. Hybrid systems with constraints

    CERN Document Server

    Daafouz, Jamal; Sigalotti, Mario

    2013-01-01

    Control theory is the main subject of this title, in particular analysis and control design for hybrid dynamic systems.The notion of hybrid systems offers a strong theoretical and unified framework to cope with the modeling, analysis and control design of systems where both continuous and discrete dynamics interact. The theory of hybrid systems has been the subject of intensive research over the last decade and a large number of diverse and challenging problems have been investigated. Nevertheless, many important mathematical problems remain open.This book is dedicated mainly to

  13. Hybrid Bloch Brane

    CERN Document Server

    Bazeia, D; Losano, L

    2016-01-01

    This work reports on models described by two real scalar fields coupled with gravity in the five-dimensional spacetime, with a warped geometry involving one infinite extra dimension. Through a mechanism that smoothly changes a thick brane into a hybrid brane, one investigates the appearance of hybrid branes hosting internal structure, characterized by the splitting on the energy density and the volcano potential, induced by the parameter which controls interactions between the two scalar fields. In particular, we investigate distinct symmetric and asymmetric hybrid brane scenarios.

  14. Hybrid Bloch brane

    Energy Technology Data Exchange (ETDEWEB)

    Bazeia, D.; Lima, Elisama E.M.; Losano, L. [Universidade Federal da Paraiba, Departamento de Fisica, Joao Pessoa, PB (Brazil)

    2017-02-15

    This work reports on models described by two real scalar fields coupled with gravity in the five-dimensional spacetime, with a warped geometry involving one infinite extra dimension. Through a mechanism that smoothly changes a thick brane into a hybrid brane, one investigates the appearance of hybrid branes hosting internal structure, characterized by the splitting on the energy density and the volcano potential, induced by the parameter which controls interactions between the two scalar fields. In particular, we investigate distinct symmetric and asymmetric hybrid brane scenarios. (orig.)

  15. Hybrid silicon evanescent devices

    Directory of Open Access Journals (Sweden)

    Alexander W. Fang

    2007-07-01

    Full Text Available Si photonics as an integration platform has recently been a focus of optoelectronics research because of the promise of low-cost manufacturing based on the ubiquitous electronics fabrication infrastructure. The key challenge for Si photonic systems is the realization of compact, electrically driven optical gain elements. We review our recent developments in hybrid Si evanescent devices. We have demonstrated electrically pumped lasers, amplifiers, and photodetectors that can provide a low-cost, scalable solution for hybrid integration on a Si platform by using a novel hybrid waveguide architecture, consisting of III-V quantum wells bonded to Si waveguides.

  16. Proton Radioactivity Within a Hybrid Metho d

    Institute of Scientific and Technical Information of China (English)

    张鸿飞

    2016-01-01

    The proton radioactivity half-lives are investigated theoretically within a hybrid method. The potential barriers preventing the emission of protons are determined in the quasimolecular shape path within a generalized liquid drop model (GLDM). The penetrability is calculated with the Wentzel-Kramers-Brillouin (WKB) approximation. The spectroscopic factor has been taken into account in half-life calculation, which is obtained by employing the relativistic mean field (RMF) theory combined with the Bardeen-Cooper-Schrieffer (BCS) method. The half-lives within the present hybrid method repro-duced the experimental data very well. Some predictions for proton radioactivity are made for future experiments.

  17. Combined photovoltaic and thermal hybrid collector systems

    Energy Technology Data Exchange (ETDEWEB)

    Kern, E.C. Jr.; Russell, M.C.

    1978-01-01

    Solar energy collectors that produce both electric and thermal energy are an attractive alternative to individual thermal and photovoltaic collectors for certain applications and climates. Economic results from a system analysis indicate that hybrid collector systems are attractive in small buildings that have substantial heating loads. Passively cooled photovoltaic panels are best suited for structures located in regions where year-round air conditioning and small, low-grade, thermal energy demands predominate. Hybrid collectors are to be tested according to ASHRAE standards and a full-system experiment incorporating a photovoltaic array installed at the Solar Energy Research Facility of the University of Texas will be conducted by Lincoln Laboratory.

  18. Hybrid scheme for Brownian semistationary processes

    DEFF Research Database (Denmark)

    Bennedsen, Mikkel; Lunde, Asger; Pakkanen, Mikko S.

    the asymptotics of the mean square error of the hybrid scheme and we observe that the scheme leads to a substantial improvement of accuracy compared to the ordinary forward Riemann-sum scheme, while having the same computational complexity. We exemplify the use of the hybrid scheme by two numerical experiments......, where we examine the finite-sample properties of an estimator of the roughness parameter of a Brownian semistationary process and study Monte Carlo option pricing in the rough Bergomi model of Bayer et al. (2015), respectively....

  19. Chaotic mixer improves microarray hybridization.

    Science.gov (United States)

    McQuain, Mark K; Seale, Kevin; Peek, Joel; Fisher, Timothy S; Levy, Shawn; Stremler, Mark A; Haselton, Frederick R

    2004-02-15

    Hybridization is an important aspect of microarray experimental design which influences array signal levels and the repeatability of data within an array and across different arrays. Current methods typically require 24h and use target inefficiently. In these studies, we compare hybridization signals obtained in conventional static hybridization, which depends on diffusional target delivery, with signals obtained in a dynamic hybridization chamber, which employs a fluid mixer based on chaotic advection theory to deliver targets across a conventional glass slide array. Microarrays were printed with a pattern of 102 identical probe spots containing a 65-mer oligonucleotide capture probe. Hybridization of a 725-bp fluorescently labeled target was used to measure average target hybridization levels, local signal-to-noise ratios, and array hybridization uniformity. Dynamic hybridization for 1h with 1 or 10ng of target DNA increased hybridization signal intensities approximately threefold over a 24-h static hybridization. Similarly, a 10- or 60-min dynamic hybridization of 10ng of target DNA increased hybridization signal intensities fourfold over a 24h static hybridization. In time course studies, static hybridization reached a maximum within 8 to 12h using either 1 or 10ng of target. In time course studies using the dynamic hybridization chamber, hybridization using 1ng of target increased to a maximum at 4h and that using 10ng of target did not vary over the time points tested. In comparison to static hybridization, dynamic hybridization reduced the signal-to-noise ratios threefold and reduced spot-to-spot variation twofold. Therefore, we conclude that dynamic hybridization based on a chaotic mixer design improves both the speed of hybridization and the maximum level of hybridization while increasing signal-to-noise ratios and reducing spot-to-spot variation.

  20. Close Look at Hybrid Vehicle Loyalty and Ownership

    Energy Technology Data Exchange (ETDEWEB)

    Hwang, Ho-Ling [ORNL; Chin, Shih-Miao [ORNL; Wilson, Daniel W [ORNL; Oliveira Neto, Francisco Moraes [ORNL; Taylor, Rob D [ORNL

    2013-01-01

    In a news release dated April 9, 2012, Polk stated that only 35% of hybrid owners bought a hybrid again when they returned to market in 2011. These findings were based on an internal study conducted by Polk. The study also indicated that if repurchase behavior among the high volume audience of Toyota Prius owners wasn t factored in; hybrid loyalty would drop to under 25%. This news release has generated a lot of interest and concern by the automobile industry as well as consumers, since it was published, and caused many to think about the idea of hybrid loyalty as well as factors that influence consumers. Most reactions to the 35% hybrid loyalty dealt with concerns of the viability of hybrid technology as part of the solution to address transportation energy challenges. This paper attempts to shed more light on Polk s hybrid loyalty study as well as explore several information sources concerning hybrid loyalty status. Specifically, major factors that might impact the selection and acquisition of hybrid vehicles are addressed. This includes investigating the associations between hybrid market shares and influencing factors like fuel price and hybrid incentives, as well as the availability of hybrid models and other highly fuel efficient vehicle options. This effort is not in-depth study, but rather a short study to see if Polk s claim could be validated. This study reveals that Polk s claim was rather misleading because its definition of loyalty was very narrow. This paper also suggests that Polk s analysis failed to account for some very important factors, raising the question of whether it is fair to compare a vehicle drive train option (which hybrids are) with a vehicle brand in terms of loyalty and also raises the question of whether hybrid loyalty is even a valid point to consider. This report maintains that Polk s study does not prove that hybrid owners were dissatisfied with their vehicles, which was a common theme among reporting news agencies when Polk