Soil degradation effect on biological activity in Mediterranean calcareous soils

Science.gov (United States)

Roca-Pérez, L.; Alcover-Sáez, S.; Mormeneo, S.; Boluda, R.

2009-04-01

Soil degradation processes include erosion, organic matter decline, compaction, salinization, landslides, contamination, sealing and biodiversity decline. In the Mediterranean region the climatological and lithological conditions, together with relief on the landscape and anthropological activity are responsible for increasing desertification process. It is therefore considered to be extreme importance to be able to measure soil degradation quantitatively. We studied soil characteristics, microbiological and biochemical parameters in different calcareous soil sequences from Valencia Community (Easter Spain), in an attempt to assess the suitability of the parameters measured to reflect the state of soil degradation and the possibility of using the parameters to assess microbiological decline and soil quality. For this purpose, forest, scrubland and agricultural soil in three soil sequences were sampled in different areas. Several sensors of the soil biochemistry and microbiology related with total organic carbon, microbial biomass carbon, soil respiration, microorganism number and enzyme activities were determined. The results show that, except microorganism number, these parameters are good indicators of a soil biological activity and soil quality. The best enzymatic activities to use like indicators were phosphatases, esterases, amino-peptidases. Thus, the enzymes test can be used as indicators of soil degradation when this degradation is related with organic matter losses. There was a statistically significant difference in cumulative O2 uptake and extracellular enzymes among the soils with different degree of degradation. We would like to thank Spanish government-MICINN for funding and support (MICINN, project CGL2006-09776).

Degradation kinetics of ptaquiloside in soil and soil solution

DEFF Research Database (Denmark)

Ovesen, Rikke Gleerup; Rasmussen, Lars Holm; Hansen, Hans Christian Bruun

2008-01-01

and soil solutions in sandy and clayey soils subjected to high natural PTA loads from bracken stands. Degradation kinetics in moist soil could be fitted with the sum of a fast and a slow first-order reaction; the fast reaction contributed 20 to 50% of the total degradation of PTA. The fast reaction...... was similar in all horizons, with the rate constant k1F ranging between 0.23 and 1.5/h. The slow degradation, with the rate constant k1S ranging between 0.00067 and 0.029/h, was more than twice as fast in topsoils compared to subsoils, which is attributable to higher microbial activity in topsoils....... Experiments with sterile controls confirmed that nonmicrobial degradation processes constituted more than 90% of the fast degradation and 50% of the slow degradation. The lower nonmicrobial degradation rate observed in the clayey compared with the sandy soil is attributed to a stabilizing effect of PTA...

Soil Degradation-Induced Decline in Productivity of Sub-Saharan African Soils: The Prospects of Looking Downwards the Lowlands with the Sawah Ecotechnology

Directory of Open Access Journals (Sweden)

Sunday E. Obalum

2012-01-01

Full Text Available The paper provides an insight into the problem of land degradation in Sub-Saharan Africa, with emphasis on soil erosion and its effect on soil quality and productivity, and proposes a lowland-based rice-production technology for coping with the situation. Crop yields are, in addition to the degree of past and current erosion, determined by a number of interacting variables. This, coupled with the generally weak database on erosion-induced losses in crop yield in spite of the region’s high vulnerability to erosion, makes it difficult to attain a reliable inference on the cause-effect relationship between soil loss and productivity. Available data suggest, however, that the region is at risk of not meeting up with the challenges of agriculture in this 21st century. Based on the few studies reviewed, methodology appears to have an overwhelming influence on the erosion-productivity response, whereas issues bordering on physical environment and soil affect the shape of the response curve. We argue that the sawah ecotechnology has the potential of countering the negative agronomic and environmental impacts of land degradation in Sub-Saharan Africa. This is a farmer-oriented, low-cost system of managing soil, water, and nutrient resources for enhancing lowland rice productivity and realizing Green Revolution in the region.

Soil Degradation, Land Scarcity and Food Security: Reviewing a Complex Challenge

Directory of Open Access Journals (Sweden)

Tiziano Gomiero

2016-03-01

Full Text Available Soil health, along with water supply, is the most valuable resource for humans, as human life depends on the soil’s generosity. Soil degradation, therefore, poses a threat to food security, as it reduces yield, forces farmers to use more inputs, and may eventually lead to soil abandonment. Unfortunately, the importance of preserving soil health appears to be overlooked by policy makers. In this paper, I first briefly introduce the present situation concerning agricultural production, natural resources, soil degradation, land use and the challenge ahead, to show how these issues are strictly interwoven. Then, I define soil degradation and present a review of its typologies and estimates at a global level. I discuss the importance of preserving soil capital, and its relationship to human civilization and food security. Trends concerning the availability of arable agricultural land, different scenarios, and their limitations, are analyzed and discussed. The possible relation between an increase in a country’s GNP, population and future availability of arable land is also analyzed, using the World Bank’s database. I argue that because of the many sources of uncertainty in the data, and the high risks at stake, a precautionary approach should be adopted when drawing scenarios. The paper ends with a discussion on the key role of preserving soil organic matter, and the need to adopt more sustainable agricultural practices. I also argue that both our relation with nature and natural resources and our lifestyle need to be reconsidered.

Soil physical land degradation processes

Science.gov (United States)

Horn, Rainer

2017-04-01

According to the European Soil Framework Directive (2006) soil compaction is besides water and wind erosion one of the main physical reasons and threats of soil degradation. It is estimated, that 32% of the subsoils in Europe are highly degraded and 18% moderately vulnerable to compaction. The problem is not limited to crop land or forest areas (especially because of non-site adjusted harvesting machines) but is also prevalent in rangelands and grassland, and even in so called natural non-disturbed systems. The main reasons for an intense increase in compacted agricultural or forested regions are the still increasing masses of the machines as well the increased frequency of wheeling under non favorable site conditions. Shear and vibration induced soil deformation enhances the deterioration of soil properties especially if the soil water content is very high and the internal soil strength very low. The same is true for animal trampling in combination with overgrazing of moist to wet pastures which subsequently causes a denser (i.e. reduced proportion of coarse pores with smaller continuity) but still structured soil horizons and will finally end in a compacted platy structure. In combination with high water content and shearing due to trampling therefore results in a complete muddy homogeneous soil with no structure at all. (Krümmelbein et al. 2013) Site managements of arable, forestry or horticulture soils requires a sufficiently rigid pore system which guarantees water, gas and heat exchange, nutrient transport and adsorption as well as an optimal rootability in order to avoid subsoil compaction. Such pore system also guarantees a sufficient microbial activity and composition in order to also decompose the plant etc. debris. It is therefore essential that well structured horizons dominate in soils with at best subangular blocky structure or in the top A- horizons a crumbly structure due to biological activity. In contrast defines the formation of a platy

Modelling land degradation in IMAGE 2

NARCIS (Netherlands)

Hootsmans RM; Bouwman AF; Leemans R; Kreileman GJJ; MNV

2001-01-01

Food security may be threatened by loss of soil productivity as a result of human-induced land degradation. Water erosion is the most important cause of land degradation, and its effects are irreversible. This report describes the IMAGE land degradation model developed for describing current and

Meteoric 10Be as a tool to investigate human induced soil fluxes: a conceptual model

Science.gov (United States)

Campforts, Benjamin; Govers, Gerard; Vanacker, Veerle; De Vente, Joris; Boix-Fayos, Carolina; Minella, Jean; Baken, Stijn; Smolders, Erik

2014-05-01

The use of meteoric 10Be as a tool to understand long term landscape behavior is becoming increasingly popular. Due its high residence time, meteoric 10Be allows in principle to investigate in situ erosion rates over time scales exceeding the period studied with classical approaches such as 137Cs. The use of meteoric 10Be strongly contributes to the traditional interpretation of sedimentary archives which cannot be unequivocally coupled to sediment production and could provide biased information over longer time scales (Sadler, 1981). So far, meteoric 10Be has successfully been used in geochemical fingerprinting of sediments, to date soil profiles, to assess soil residence times and to quantify downslope soil fluxes using accumulated 10Be inventories along a hill slope. However, less attention is given to the potential use of the tracer to directly asses human induced changes in soil fluxes through deforestation, cultivation and reforestation. A good understanding of the processes governing the distribution of meteoric 10Be both within the soil profile and at landscape scale is essential before meteoric 10Be can be successfully applied to assess human impact. We developed a spatially explicit 2D-model (Be2D) in order to gain insight in meteoric 10Be movement along a hillslope that is subject to human disturbance. Be2D integrates both horizontal soil fluxes and vertical meteoric 10Be movement throughout the soil prolife. Horizontal soil fluxes are predicted using (i) well studied geomorphical laws for natural erosion and soil formation as well as (ii) human accelerated water and tillage erosion. Vertical movement of meteoric 10Be throughout the soil profile is implemented by inserting depth dependent retardation calculated using experimentally determined partition coefficients (Kd). The model was applied to different environments such as (i) the Belgian loess belt, characterized by aeolian deposits enriched in inherited meteoric 10Be, (ii) highly degraded and stony

Interleukin-1 Acts via the JNK-2 Signaling Pathway to Induce Aggrecan Degradation by Human Chondrocytes.

Science.gov (United States)

Ismail, Heba M; Yamamoto, Kazuhiro; Vincent, Tonia L; Nagase, Hideaki; Troeberg, Linda; Saklatvala, Jeremy

2015-07-01

Aggrecan enables articular cartilage to bear load and resist compression. Aggrecan loss occurs early in osteoarthritis and rheumatoid arthritis and can be induced by inflammatory cytokines such as interleukin-1 (IL-1). IL-1 induces cleavage of specific aggrecans characteristic of the ADAMTS proteinases. The aim of this study was to identify the intracellular signaling pathways by which IL-1 causes aggrecan degradation by human chondrocytes and to investigate how aggrecanase activity is controlled by chondrocytes. We developed a cell-based assay combining small interfering RNA (siRNA)-induced knockdown with aggrecan degradation assays. Human articular chondrocytes were overlaid with bovine aggrecan after transfection with siRNAs against molecules of the IL-1 signaling pathway. After IL-1 stimulation, released aggrecan fragments were detected with AGEG and ARGS neoepitope antibodies. Aggrecanase activity and tissue inhibitor of metalloproteinases 3 levels were measured by enzyme-linked immunosorbent assay. Low-density lipoprotein receptor-related protein 1 (LRP-1) shedding was analyzed by Western blotting. ADAMTS-5 is a major aggrecanase in human chondrocytes, regulating aggrecan degradation in response to IL-1. The tumor necrosis factor receptor-associated 6 (TRAF-6)/transforming growth factor β-activated kinase 1 (TAK-1)/MKK-4 signaling axis is essential for IL-1-induced aggrecan degradation, while NF-κB is not. Of the 3 MAPKs (ERK, p38, and JNK), only JNK-2 showed a significant role in aggrecan degradation. Chondrocytes constitutively secreted aggrecanase, which was continuously endocytosed by LRP-1, keeping the extracellular level of aggrecanase low. IL-1 induced aggrecanase activity in the medium in a JNK-2-dependent manner, possibly by reducing aggrecanase endocytosis, because IL-1 caused JNK-2-dependent shedding of LRP-1. The signaling axis TRAF-6/TAK-1/MKK-4/JNK-2 mediates IL-1-induced aggrecanolysis. The level of aggrecanase is controlled by its

Enantioselective degradation and enantiomerization of indoxacarb in soil.

Science.gov (United States)

Sun, Dali; Pang, Junxiao; Qiu, Jing; Li, Li; Liu, Chenglan; Jiao, Bining

2013-11-27

In this study, the enantioselective degradation and enantiomerizaton of indoxacarb were investigated in two soils under nonsterilized and sterilized conditions using a chiral OD-RH column on a reversed-phase HPLC. Under nonsterilized conditions, the degradation of indoxacarb in two soils was enantioselective. In acidic soil, the half-lives of R-(-)- and S-(+)-indoxacarb were 10.43 and 14.00 days, respectively. Acidic soil was preferential to the degradation of R-(-)-indoxacarb. In alkaline soil, the half-lives of R-(-)- and S-(+)-indoxacarb were 12.14 and 4.88 days, respectively. S-(+)-Indoxacarb was preferentially degraded. Under sterilized conditions, approximately 5-10% of the initial concentration degraded after 75 days of incubation in acidic soil, whereas in alkaline soil, approximately half of the initial concentration degraded due to chemical hydrolysis under alkaline conditions. Enantiomerization was also discovered in acidic and alkaline soils. The results showed that mutual transformation existed between two enantiomers and that S-(+)-indoxacarb had a significantly higher inversion rate to R-(-)-indoxacarb than its antipode.

Enhanced degradation of 14C-HCB in two tropical clay soils using multiple anaerobic–aerobic cycles

International Nuclear Information System (INIS)

Orori Kengara, Fredrick; Doerfler, Ulrike; Welzl, Gerhard; Ruth, Bernhard; Munch, Jean Charles; Schroll, Reiner

2013-01-01

The aim of the study was to induce and enhance the degradation of hexachlorobenzene (HCB), a highly-chlorinated persistent organic pollutant, in two ecologically different tropical soils: a paddy soil (PS) and a non-paddy soil (FS). The degradation of HCB was enhanced using two anaerobic–aerobic cycles in model laboratory experiments. There was greater degradation of HCB in the PS (half-life of 224 days) relative to the FS (half-life of 286 days). It was further shown that soils amended with compost had higher metabolite concentrations relative to the non-amended soils. In the first cycle, there was little degradation of HCB in both soils. However, in the second cycle, there was enhanced mineralization in the PS under aerobic conditions, with the compost-treated samples showing higher mineralization. There was also extensive volatilization in both soils. The metabolite pattern revealed that the increased mineralization and volatilization was due to the formation of lower chlorinated benzenes. - Highlights: ► Two anaerobic–aerobic cycles enhanced the dissipation of HCB in two tropical soils – a paddy and non-paddy soil. ► The paddy soil was more effective in degrading HCB. ► The non-paddy soil adapted and degraded HCB in the second anaerobic–aerobic cycle. ► An additional carbon source enhanced degradation and mineralisation of HCB in both soils. - Two anaerobic–aerobic cycles enhance the degradation of HCB in two ecologically different tropical clay soils.

An Overview of Soils and Human Health

Science.gov (United States)

Brevik, Eric C.

2013-04-01

Few people recognize the connection between soils and human health, even though soils are actually very important to health. Soils influence health through the nutrients taken up by plants and the animals that eat those plants, nutrients that are needed for adequate nutrition for growth and development. Soils can also act to harm human health in three major ways: i) toxic levels of substances or disease-causing organisms may enter the human food chain from the soil ii) humans can encounter pathogenic organisms through direct contact with the soil or inhaling dust from the soil, and iii) degraded soils produce nutrient-deficient foods leading to malnutrition. Soils have also been a major source of medicines. Therefore, soils form an integral link in the holistic view of human health. In this presentation, soils and their influence on human health are discussed from a broad perspective, including both direct influences of soils on health and indirect influences through things such as climate change, occupational exposure to soil amendments, and the role of soils in providing food security.

Experimental Warming Aggravates Degradation-Induced Topsoil Drought in Alpine Meadows of The Qinghai-Tibetan Plateau

Science.gov (United States)

Xue, X.

2017-12-01

Climatic warming is presumed to cause topsoil drought by increasing evapotranspiration and water infiltration, and by progressively inducing land degradation in alpine meadows of the Qinghai-Tibetan Plateau. However, how soil moisture and temperature patterns of degraded alpine meadows respond to climate warming remains unclear. A six-year continuous warming experiment was carried out in both degraded and undegraded alpine meadows in the source region of the Yangtze River. The goal was to identify the effects of climatic warming and land degradation on soil moisture (θ), soil surface temperature (Tsfc), and soil temperature (Ts). In the present study, land degradation significantly reduced θ by 4.5-6.1% at a depth of 0-100 cm (P soil surface. Experimental warming aggravated topsoil drought caused by land degradation, intensified the magnitude of degradation, and caused a positive feedback in the degraded alpine meadow ecosystem. Therefore, an immediate need exists to restore degraded alpine meadow grasslands in the Qinghai-Tibetan Plateau in anticipation of a warmer future.

Soil organic matter degradation and enzymatic profiles of intertidal and subaqueous soils

Science.gov (United States)

Ferronato, Chiara; Marinari, Sara; Bello, Diana; Vianello, Gilmo; Trasar-Cepeda, Carmen; Vittori Antisari, Livia

2017-04-01

The interest on intertidal and subaqueous soils has recently arisen because of the climate changes forecasts. The preservation of these habitats represents an important challenge for the future of humanity, because these systems represent an important global C sink since soil organic matter (SOM) on intertidal and subaqueous soils undergoes very slow degradation rates due to oxygen limitation. Publications on SOM cycle in saltmarshes are very scarce because of the difficulties involved on those studies i.e. the interaction of many abiotic and biotic factors (e.g., redox changes, water and bio-turbation processes, etc) and stressors (e.g., salinity and anoxia). However, saltmarshes constitute an unique natural system to observe the influence of anoxic conditions on SOM degradation, because the tide fluctuations on the soil surface allow the formation of provisionally or permanently submerged soils. With the aim to investigate the quality of SOM in subaqueous soils, triplicates of subaqueous soils (SASs), intertidal soils (ITSs) and terrestrial soils (TESs) were collected in the saltmarshes of the Baiona Lagoon (Northern Italy) and classified according to their pedogenetic horizons. The SOM quality on each soil horizon was investigated by quantifying SOM, total and water-soluble organic carbon (TOC, WSC) and microbial biomass carbon (MBC). Given the contribution of soil enzymes to the degradation of SOM, some enzymatic assays were also performed. Thereafter, soil classification and humus morpho-functional classification were used to join together similar soil profiles to facilitate the description and discussion of results. Soils were ranked as Aquent or Wassent Entisols, with an A/AC/C pedosequence. SOM, TOC and MBC were statistically higher in A than in AC and C horizons. Among the A horizons, ITSs were those showing the highest values for these parameters (11% TOC, 1.6 mg kg-1 MBC, 0.9 mg kg-1 WSC). These results, combined with the morpho-functional classification

Reducing Nutrient Losses with Directed Fertilization of Degraded Soils

Science.gov (United States)

Menzies, E.; Walter, M. T.; Schneider, R.

2016-12-01

Degraded soils around the world are stunting agricultural productivity in places where people need it the most. In China, hundreds of years of agriculture and human activity have turned large swaths of productive grasslands into expanses of sandy soils where nothing can grow. Returning soils such as these to healthy productive landscapes is crucial to the livelihoods of rural families and to feeding the expanding population of China and the world at large. Buried wood chips can be used to improve the soils' water holding capacity but additional nutrient inputs are crucial to support plant growth and completely restore degraded soils in China and elsewhere. Improperly applied fertilizer can cause large fluxes of soluble nutrients such as nitrogen (N) and phosphorus (P) to pollute groundwater, and reach surface water bodies causing harmful algal blooms or eutrophication. Similarly, fertilization can create increases in nutrient losses in the form of greenhouse gases (GHGs). It is imperative that nutrient additions to this system be done in a way that fosters restoration and a return to productivity, but minimizes nutrient losses to adjacent surface water bodies and the atmosphere. The primary objective of this study is to characterize soluble and gaseous N and P losses from degraded sandy soils with wood chip and fertilizer amendments in order to identify optimal fertilization methods, frequencies, and quantities for soil restoration. A laboratory soil column study is currently underway to begin examining these questions results of this study will be presented at the Fall Meeting.

Hydrocarbon degradation potential in reference soils and soils contaminated with jet fuel

International Nuclear Information System (INIS)

Lee, R.F.; Hoeppel, R.

1991-01-01

Petroleum degradation in surface and subsurface soils is affected by such factors as moisture content, pH, soil type, soil organics, temperature, and oxygen concentrations. In this paper, the authors determine the degradation rates of 14 C-labeled hydrocarbons added to soils collected from a contaminated surface site, contaminated subsurface sites, and a clean reference site. The radiolabeled hydrocarbons used include benzene, toluene, naphthalene, 1-methynaphthalene, phenanthrene, fluorene, anthracene, chrysene, and hexadecane. Microbial degradation rates were based on determination of mineralization rates (production of 14 CO 2 ) of hydrocarbons that were added to soil samples. Since water was added and oxygen was not limiting, the hydrocarbon rates determined are likely to be higher than those occurring in situ. Using radiolabeled hydrocarbons, information can be provided on differences in the degradation rates of various petroleum compounds in different types of soils at a site, on possible production of petroleum metabolites in the soil, and on the importance of anaerobic petroleum degradation and the effects of nutrient, water, and surfactant addition on biodegradation rates

Biogenic volatile organic compounds as a potential stimulator for organic contaminant degradation by soil microorganisms

International Nuclear Information System (INIS)

McLoughlin, Emma; Rhodes, Angela H.; Owen, Susan M.; Semple, Kirk T.

2009-01-01

The effects of monoterpenes on the degradation of 14 C-2,4-dichlorophenol (DCP) were investigated in soils collected from areas surrounding monoterpene and non-monoterpene-emitting vegetation. Indigenous microorganisms degraded 14 C-2,4-DCP to 14 CO 2 , after 1 d contact time. Degradation was enhanced by prior exposure of the soils to 2,4-DCP for 32 d, increasing extents of mineralisation up to 60%. Monoterpene amendments further enhanced 2,4-DCP degradation, but only following pre-exposure to both 2,4-DCP and monoterpene, with total 2,4-DCP mineralisation extents of up to 71%. Degradation was greatest at the higher monoterpene concentrations (≥1 μg kg -1 ). Total mineralisation extents were similar between concentrations, but higher than the control and the 0.1 μg kg -1 amendment, indicating that increases in monoterpene concentration has a diminishing enhancing effect. We suggest that monoterpenes can stimulate the biodegradation of 2,4-DCP by indigenous soil microorganisms and that monoterpene amendment in soils is an effective strategy for removing organic contaminants. - A amendment of soils with monoterpenes may induce organic contaminant degradation by indigenous soil microorganisms

Gold nanoparticles enhance the X-ray-induced degradation of human centrin 2 protein

International Nuclear Information System (INIS)

Brun, Emilie; Duchambon, Patricia; Blouquit, Yves; Keller, Gerard; Sanche, Leon; Sicard-Roselli, Cecile

2009-01-01

In the war against cancer, radiotherapy is a prominent tool but counterbalanced by the fact that it also induces damages in healthy tissues. Nanotechnologies could open a new possibility to decrease these side effects. In particular, gold nanoparticles (GNPs) could be used as radio-sensitizers. As the role of proteins in the processes leading to cell death cannot be neglected, their radio-sensitization by GNPs is of great interest. This is particularly true in the case of the human centrin 2 protein, which has been proposed to be involved in DNA repair processes. To investigate this effect, we quantified for the first time the degradation of this protein in a gold colloidal solution when submitted to X-rays. We showed that the X-ray-induced degradation of the human centrin 2 protein is enhanced 1.5-fold in the presence of GNPs, even though no covalent bond exists between protein and GNPs. Among the conditions tested, the maximum enhancement was found with the higher GNP:protein ratio of 2x10 -4 and with the higher X-ray energy of 49 keV

Soil and geomorphological parameters to characterize natural environmental and human induced changes within the Guadarrama Range (Central Spain)

Science.gov (United States)

Schmid, Thomas; Inclán-Cuartas, Rosa M.; Santolaria-Canales, Edmundo; Saa, Antonio; Rodríguez-Rastrero, Manuel; Tanarro-Garcia, Luis M.; Luque, Esperanza; Pelayo, Marta; Ubeda, Jose; Tarquis, Ana; Diaz-Puente, Javier; De Marcos, Javier; Rodriguez-Alonso, Javier; Hernandez, Carlos; Palacios, David; Gallardo-Díaz, Juan; Fidel González-Rouco, J.

2016-04-01

to determine the physical and chemical soil properties. The parent material is gneiss andassociated deposits and, as a result, soils are acid. The soils have a low to medium organic matter content and are non-saline. They are moderately to well drained soils and have no or slight evidence of erosion. The soil within the high mountain area has clear evidence of frost heave that has a vertical displacement of the surface in the centimeter range. The stations within the lowland and mid mountain areas represent the most degraded sites as a result of the livestock keeping, whereas the high mountain area is mainly influenced by natural environmental conditions. These soil and geomorphological parameters will constitute a basis for site characterization in future studies regarding soil degradation; determining the interaction between soil, vegetation and atmosphere with respect to human induced activities (e.g. atmospheric contamination and effects of fires); determining the nitrogen and carbon cycles; and the influence of heavy metal contaminants in the soils.

A Modified Soil Quality Index to Assess the Influence of Soil Degradation Processes on Desertification Risk: The Apulia Case

Directory of Open Access Journals (Sweden)

Valeria Ancona

2010-10-01

Full Text Available Apulia is one of the most prone Italian regions to soil alteration phenomena, due to geographical and climatic conditions and also to human activities’ impact. In this study, in order to investigate regional soil degradation processes, following the “European Directive for Soil Protection”, the ESA’s method has been adopted. It is based on the use of an indicator’s set to assess the desertification risk. This approach simplifies the diagnosis and monitoring of soil degradation processes, defining their status and trend. Special attention has been given to Soil Quality Index (SQI determined by six predisposing indicators (parent material, soil texture, rock fragment, soil depth, drainage and slope grade. The integration in the SQI calculation of two additional soil parameters (organic matter content and soil salinity has been considered particularly significant. In fact, through the evaluation of a so “modified SQI” and the Apulia land use too, it could be possible to assess the role of agriculture management on soil degradation processes, which predisposing regional area to desertification threat. Moreover this approach provides short, but accurate, information thanks to GIS integration, which defines phenomena in detail, offering helpful planning tools.

Degradation of chlorpyrifos in tropical rice soils.

Science.gov (United States)

Das, Subhasis; Adhya, Tapan K

2015-04-01

Chlorpyrifos [O,O-diethyl O-(3,5,6-trichloro-2-pyridinol) phosphorothioate] is used worldwide as an agricultural insecticide against a broad spectrum of insect pests of economically important crops including rice, and soil application to control termites. The insecticide mostly undergoes hydrolysis to diethyl thiophosphoric acid (DETP) and 3,5,6-trichloro-2-pyridinol (TCP), and negligible amounts of other intermediate products. In a laboratory-cum-greenhouse study, chlorpyrifos, applied at a rate of 10 mg kg(-1) soil to five tropical rice soils of wide physico-chemical variability, degraded with a half-life ranging from 27.07 to 3.82 days. TCP was the major metabolite under both non-flooded and flooded conditions. Chlorpyrifos degradation had significant negative relationship with electrical conductivity (EC), cation exchange capacity (CEC), clay and sand contents of the soils under non-flooded conditions. Results indicate that degradation of chlorpyrifos was accelerated with increase in its application frequency, across the representative rice soils. Management regimes including moisture content and presence or absence of rice plants also influenced the process. Biotic factors also play an important role in the degradation of chlorpyrifos as demonstrated by its convincing degradation in mineral salts medium inoculated with non-sterile soil suspension. Copyright © 2015 Elsevier Ltd. All rights reserved.

Autophagy participates in isoliquiritigenin-induced melanin degradation in human epidermal keratinocytes through PI3K/AKT/mTOR signaling.

Science.gov (United States)

Yang, Zhibo; Zeng, Biyun; Pan, Yi; Huang, Pan; Wang, Chang

2018-01-01

Melanin is the pigment responsible for the color of human skin and hair. Melanin serves as a double-edge sword which can exert both protective and spot-causing effects on skin. Although melanin has an important role in protecting the skin against UV damage, an excessive or uneven melanin production can lead to the formation of freckles and age spots. Isoliquiritigenin (ISL) has been reported to inhibit melanin synthesis; however, its role in melanin degradation remains unclear. In the present study, we evaluated the detailed function of ISL in melanin degradation in human epidermal keratinocytes. Since autophagy has been reported to be related to melanin degradation, we also examined the activation of autophagy by ISL treatment in keratinocytes by measurement of autophagy-related proteins, ATG7, LC3 and p62. Moreover, si-ATG7-induced ATG7 knockdown and autophagy inhibitor 3-MA decreased LC3 II protein levels and increased PMEL17, p62 and melanin levels in HaCaT cells, which could be partially reversed by ISL treatment, indicating that autophagy participated in melanin degradation. The decreased p-AKT and p-mTOR proteins upon ISL treatment indicated the involvement of PI3K/AKT/mTOR signaling in ISL-induced melanin degradation. Taken together, we demonstrated that autophagy participates in ISL-induced melanin degradation in human epidermal keratinocytes through PI3K/AKT/mTOR signaling. Copyright © 2017. Published by Elsevier Masson SAS.

Degradation of aldrin im samples of 'cerrado' Brazilian soils

International Nuclear Information System (INIS)

Musumeci, M.R.; Ruegg, E.F.

1981-01-01

14 C-aldrin degradation was studied in the laboratory, in samples of 'cerrado' Brazilian soils, during a period of 240 days. Recovery of radiocarbon decreased with time, although radiocarbon was not incorporated to the soil organic matter as show by soil combustion. In both soils 14 C-aldrin degraded to dieldrin and another compound that showed caracteristics of a hydrosoluble derivative of aldrin 14 C-aldrin was more persistent in sandy soil but amendment of this soil with nutrients or fertilizers did not enhanced aldrin degradation in this soil. (Author) [pt

Agrogenic degradation of soils in Krasnoyarsk forest-steppe

Science.gov (United States)

Shpedt, A. A.; Trubnikov, Yu. N.; Zharinova, N. Yu.

2017-10-01

Agrogenic degradation of soils in Krasnoyarsk forest-steppe was investigated. Paleocryogenic microtopography of microlows and microhighs in this area predetermined the formation of paragenetic soil series and variegated soil cover. Specific paleogeographic conditions, thin humus horizons and soil profiles, and long-term agricultural use of the land resulted in the formation of soils unstable to degradation processes and subjected to active wind and water erosion. Intensive mechanical soil disturbances during tillage and long-term incorporation of the underlying Late Pleistocene (Sartan) calcareous silty and clay loams into the upper soil horizons during tillage adversely affected the soil properties. We determined the contents of total and labile humus and easily decomposable organic matter and evaluated the degree of soil exhaustion. It was concluded that in the case of ignorance of the norms of land use and soil conservation practices, intense soil degradation would continue leading to complete destruction of the soil cover within large areas.

Gold nanoparticles enhance the X-ray-induced degradation of human centrin 2 protein

Energy Technology Data Exchange (ETDEWEB)

Brun, Emilie [Laboratoire de Chimie Physique, CNRS UMR 8000, Universite Paris-Sud 11, Bat. 350, 91405 Orsay Cedex (France); Duchambon, Patricia; Blouquit, Yves [INSERM U759, Imagerie Integrative, Campus Universitaire d' Orsay, Bat. 112, Institut Curie, Centre de Recherche, Laboratoire R. Latarjet, Campus Universitaire d' Orsay, 91405 Orsay Cedex (France); Keller, Gerard [UMR CNRS 8612, Physico-Chimie-Pharmacotechnie-Biopharmacie, Universite Paris 11, Faculte de Pharmacie, 5 rue Jean-Baptiste Clement, 92296 Chatenay-Malabry (France); Sanche, Leon [Groupe en Sciences des Radiations, Departement de Medecine Nucleaire et Radiobiologie, Faculte de Medecine, Universite de Sherbrooke, Sherbrooke, Quebec, Canada J1H 5N4 (Canada); Sicard-Roselli, Cecile [Laboratoire de Chimie Physique, CNRS UMR 8000, Universite Paris-Sud 11, Bat. 350, 91405 Orsay Cedex (France)], E-mail: cecile.sicard@u-psud.fr

2009-03-15

In the war against cancer, radiotherapy is a prominent tool but counterbalanced by the fact that it also induces damages in healthy tissues. Nanotechnologies could open a new possibility to decrease these side effects. In particular, gold nanoparticles (GNPs) could be used as radio-sensitizers. As the role of proteins in the processes leading to cell death cannot be neglected, their radio-sensitization by GNPs is of great interest. This is particularly true in the case of the human centrin 2 protein, which has been proposed to be involved in DNA repair processes. To investigate this effect, we quantified for the first time the degradation of this protein in a gold colloidal solution when submitted to X-rays. We showed that the X-ray-induced degradation of the human centrin 2 protein is enhanced 1.5-fold in the presence of GNPs, even though no covalent bond exists between protein and GNPs. Among the conditions tested, the maximum enhancement was found with the higher GNP:protein ratio of 2x10{sup -4} and with the higher X-ray energy of 49 keV.

Degradation of tetraethyllead during the degradation of leaded gasoline hydrocarbons in soil

International Nuclear Information System (INIS)

Mulroy, P.T.; Ou, L.T.

1998-01-01

For over 50 years, leaded gasoline was the only fuel for automobiles, and tetraethyllead (TEL) was the major octane number enhancer used in leaded gasoline. Ample information is available on the fate and remediation of gasoline hydrocarbons in contaminated subsoils and groundwater. However, little is known regarding the fate of TEL in leaded gasoline-contaminated subsoils and groundwater. In soil not contaminated with gasoline, TEL was rapidly degraded and completely disappeared in 14 d. In gasoline-contaminated soil, TEL degradation was slower; after 77 d, 4 to 17% of the applied TEL still remained in the contaminated soil. Disappearance of total petroleum hydrocarbons (TPH) was initially rapid but slowed appreciably after 7 to 14 d. As a result, after 77 d, 33 to 51% of the applied gasoline still remained in soil. The retardation of TEL degradation in leaded gasoline-contaminated soil is due to the presence of gasoline hydrocarbons. As long as gasoline hydrocarbons remain in soil, TEL may also remain in soil, most likely in the gasoline hydrocarbon phase

Degradation and toxicity of phenyltin compounds in soil

International Nuclear Information System (INIS)

Paton, G.I.; Cheewasedtham, W.; Marr, I.L.; Dawson, J.J.C.

2006-01-01

Although the fate of organotins has been widely studied in the marine environment, fewer studies have considered their impact in terrestrial systems. The degradation and toxicity of triphenyltin in autoclaved, autoclaved-reinoculated and non-sterilised soil was studied in a 231 day incubation experiment following a single application. Degradation and toxicity of phenyltin compounds in soil was monitored using both chemical and microbial (lux-based bacterial biosensors) methods. Degradation was significantly slower in the sterile soil when compared to non-sterilised soils. In the non-sterilised treatment, the half-life of triphenyltin was 27 and 33 days at amendments of 10 and 20 mg Sn kg -1 , respectively. As initial triphenyltin degradation occurred, there was a commensurate increase in toxicity, reflecting the fact that metabolites produced may be both more bioavailable and toxic to the target receptor. Over time, the toxicity reduced as degradation proceeded. The toxicity impact on non-target receptors for these compounds may be significant. - Triphenyltin degradative metabolites cause toxic responses to biosensors

Plant-associated bacterial degradation of toxic organic compounds in soil.

LENUS (Irish Health Repository)

McGuinness, Martina

2009-08-01

A number of toxic synthetic organic compounds can contaminate environmental soil through either local (e.g., industrial) or diffuse (e.g., agricultural) contamination. Increased levels of these toxic organic compounds in the environment have been associated with human health risks including cancer. Plant-associated bacteria, such as endophytic bacteria (non-pathogenic bacteria that occur naturally in plants) and rhizospheric bacteria (bacteria that live on and near the roots of plants), have been shown to contribute to biodegradation of toxic organic compounds in contaminated soil and could have potential for improving phytoremediation. Endophytic and rhizospheric bacterial degradation of toxic organic compounds (either naturally occurring or genetically enhanced) in contaminated soil in the environment could have positive implications for human health worldwide and is the subject of this review.

Natural and fire-induced soil water repellency in a Portugese Shrubland

NARCIS (Netherlands)

Stoof, C.R.; Moore, D.; Ritsema, C.J.; Dekker, L.W.

2011-01-01

Post-fire land degradation is often attributed to fire-induced soil water repellency, despite the fact that soil water repellency is a natural phenomenon in many soils and is therefore not necessarily caused by fire. To improve our understanding of the role of soil water repellency in causing

Nanoscale zerovalent iron-mediated degradation of DDT in soil.

Science.gov (United States)

Han, Yuling; Shi, Nan; Wang, Huifang; Pan, Xiong; Fang, Hua; Yu, Yunlong

2016-04-01

Nanoscale zerovalent iron (nZVI)-mediated degradation of 1,1,1-trichloro-2,2-bis(p-chlorophenyl)ethane (DDT) was investigated in a spiked soil under different conditions (iron sources, iron dosage, soil moisture, temperature, and soil types) and DDT-contaminated field. The degradation efficiency of p,p'-DDT by nZVI and nZVI coated with sodium oleate (SO-nZVI) was much higher than that by nZVI coated with polyimide (PI-nZVI). The rapid degradation of p,p'-DDT by nZVI only occurred in flooded soil. The degradation half-life of p,p'-DDT decreased significantly from 58.3 to 27.6 h with nZVI dosage from 0.5 to 2.0% and from 46.5 to 32.0 h with temperature from 15 to 35 °C. The degradation efficiency of p,p'-DDT by nZVI differed in Jinhua (JH), Jiaxing (JX), Xiaoshan (XS), Huajiachi (HJC), and Heilongjiang (HLJ) soils. A good correlation was found between the degradation half-life of p,p'-DDT and multiple soil properties. The probable nZVI-mediated degradation pathway of p,p'-DDT in soil was proposed as DDT → DDD/DDE → DDNS → DDOH based on the metabolites identified by GC-MS. The in situ degradation efficiency of residual DDTs in a contaminated field was profoundly enhanced by the addition of nZVI as compared to the control. It is concluded that nZVI might be an efficient agent for the remediation of DDT-contaminated soil under anaerobic environment.

Degraded iota-carrageenan can induce apoptosis in human osteosarcoma cells via the Wnt/β-catenin signaling pathway.

Science.gov (United States)

Jin, Zhe; Han, Ya-Xin; Han, Xiao-Rui

2013-01-01

Osteosarcoma (OS) is a high-grade malignant bone tumor. Therefore, using both in vitro and in vivo assays, the effects of degraded iota-Carrageenan (ι-CGN) on a human osteosarcoma cell line, HOS, were examined. Degraded ι-CGN was observed to induce apoptosis and G(1) phase arrest in HOS cells. Moreover, degraded ι-CGN suppressed tumor growth in established xenograft tumor models. Accordingly, the survival rate of these mice was significantly higher than that of mice bearing tumors treated with native ι-CGN or PBS. In addition, the formation of intratumoral microvessels was inhibited following treatment with degraded ι-CGN. In Western blot assays, degraded ι-CGN was found to inhibit the Wnt/β-catenin signaling pathway. Overall, these studies demonstrate the antitumor activity of degraded ι-CGN toward the OS cell line, HOS. Moreover, valuable insight into the mechanisms mediated by degraded ι-CGN was obtained, potentially leading to the identification of novel treatments for OS. However, additional studies are needed to confirm these results in other cell types, particularly in human umbilical vein endothelial cells.

Soil quality attributes induced by land use changes in the Fincha'a ...

African Journals Online (AJOL)

Soil quality attributes induced by land use changes in the Fincha'a ... from the upstream to the downstream irrigated land by water soil erosion. ... The main degradation process overcome the study area was waterlogging and soil compaction.

Human-Induced Vegetation Degradation in a Semi-Arid Rangeland

Science.gov (United States)

Jackson, Hasan

Current assessments of anthropogenic land degradation and its impact on vegetation at regional scales are prone to large uncertainties due to the lack of an objective, transferable, spatially and temporally explicit measure of land degradation. These uncertainties have resulted in contradictory estimates of degradation extent and severity and the role of human activities. The uncertainties limit the ability to assess the effects on the biophysical environment and effectiveness of past, current, and future policies of land use. The overall objective of the dissertation is to assess degradation in a semi-arid region at a regional scale where the process of anthropogenic land degradation is evident. Net primary productivity (NPP) is used as the primary indicator to measure degradation. It is hypothesized that land degradation resulting from human factors on the landscape irreversibly reduces NPP below the potential set by environmental conditions. It is also hypothesized that resulting reductions in NPP are distinguishable from natural, spatial and temporal, variability in NPP. The specific goals of the dissertation are to (1) identify the extent and severity of degradation using productivity as the primary surrogate, (2) compare the degradation of productivity to other known mechanisms of degradation, and (3) relate the expression of degradation to components of vegetation and varying environmental conditions. This dissertation employed the Local NPP Scaling (LNS) approach to identify patterns of anthropogenic degradation of NPP in the Burdekin Dry Tropics (BDT) region of Queensland (14 million hectares), Australia from 2000 to 2013. The method started with land classification based on the environmental factors presumed to control NPP to group pixels having similar potential NPP. Then, satellite remotely sensing data were used to compare actual NPP with its potential. The difference, in units of mass of carbon fixed in NPP per unit area per monitoring interval and

Soil Degradation Processes; Procesos de Degradacion del Suelo

Energy Technology Data Exchange (ETDEWEB)

Nunez Crespi, S; Perez Martinez, M; Cuesta Santianes, M J; Cabrera Jimenez, J A

2007-12-28

In the European communication entitled Towards a Thematic Strategy for Soil Protection, eight main threats to soil were identified: contamination, erosion, loss of organic matter, compaction, salinization; hydro-geological risks, soil sealing, and decline in biodiversity. The main purpose of this report is to provide the current state of knowledge of the soil degradation processes both, in the European Community scale and, particularly, in the Spanish territory. Furthermore, the main research project information related to soil degradation processes is also included, identifying the main actors involved in soil scientific research and development. (Author) 66 refs.

Microbial degradation and impact of Bracken toxin ptaquiloside on microbial communities in soil

DEFF Research Database (Denmark)

Engel, Pernille; Brandt, Kristian Koefoed; Rasmussen, Lars Holm

2007-01-01

), but not in the NZ soil (weak acid loamy Entisol). In the DK soil PTA turnover was predominantly due to microbial degradation (biodegradation); chemical hydrolysis was occurring mainly in the uppermost A horizon where pH was very low (3.4). Microbial activity (basal respiration) and growth ([3H]leucine incorporation...... assay) increased after PTA exposure, indicating that the Bracken toxin served as a C substrate for the organotrophic microorganisms. On the other hand, there was no apparent impact of PTA on community size as measured by substrate-induced respiration or composition as indicated by community......-level physiological profiles. Our results demonstrate that PTA stimulates microbial activity and that microorganisms play a predominant role for rapid PTA degradation in Bracken-impacted soils....

Human-induced geomorphic change across environmental gradients

Science.gov (United States)

Vanacker, V.; Molina, A.; Bellin, N.; Christl, M.

2016-12-01

Human-induced land cover changes are causing important adverse effects on the ecological services rendered by mountain ecosystems, and the number of case-studies of the impact of humans on soil erosion and sediment yield has mounted rapidly. Anthropogenic disturbance of natural vegetation can profoundly alter the physical, chemical and biological processes within soils. Rapid removal of topsoil during intense farming can result in an imbalance between soil production through chemical weathering and physical soil erosion, with direct implications on nutrient cycling, soil fertility and agricultural production. In this study, we present a conceptual model for assessing human-induced erosion for a wide variety of environmental settings and pose that human-induced geomorphic change cannot be assessed solely based on modern erosion rates as natural or baseline erosion rates can be important in e.g. mountainous terrain. As such, we assess the vulnerability of a given ecosystem to human-induced land cover change by quantifying the change in catchment-wide erosion rates resulting from anthropogenic changes in vegetation cover. Human-induced erosion is here approximated by the ratio of the total specific sediment yield to the natural erosional mass flux, and is dimensionless. The conceptual model is applied to three contrasting environmental settings where data on soil production, physical soil erosion and long-term denudation are available: the tropical Andes, subtropical southern Brazil, and semi-arid Spanish Cordillera. The magnitude of human-induced geomorphic change strongly differs between the three regions. The data suggest that the sensitivity to human-induced erosion is ecosystem dependent, and related to soil erosivity and potential vegetation cover disturbances as a result of human impact. It may therefore be expected that the potential for erosion regulation is larger in well-vegetated ecosystem where strong differences may exist in vegetation cover between

Assessment of soil degradation and chemical compositions in Rwandan tea-growing areas

Directory of Open Access Journals (Sweden)

Jean de la Paix Mupenzi

2011-10-01

Full Text Available This study has focused on the processes of soil degradation and chemical element concentration in tea-growing regions of Rwanda, Africa. Soil degradation accelerated by erosion is caused not only by topography but also by human activities. This soil degradation involves both the physical loss and reduction in the amount of topsoil associated with nutrient decline. Soil samples were collected from eleven tropical zones in Rwanda and from variable depth within each collecting site. Of these, Samples from three locations in each zone were analyzed in the laboratory, with the result that the pH of all soil samples is shown to be less than 5 (pH<5 with a general average of 4.4. The elements such as iron (Fe, copper (Cu, manganese (Mn, and zinc (Zn are present in high concentration levels. In contrast calcium (Ca and sodium (Na are present at low-level concentrations and carbon (C was found in minimal concentrations. In addition, elements derived from fertilizers, such as nitrogen (N, phosphorous (P, and potassium (K which is also from minerals such as feldspar, are also present in low-level concentrations. The results indicate that the soil in certain Rwandan tea plantations is acidic and that this level of pH may help explain, in addition to natural factors, the deficiency of some elements such as Ca, Mg, P and N. The use of chemical fertilizers, land use system and the location of fields relative to household plots are also considered to help explain why tea plantation soils are typically degraded.

Biocide Runoff from Building Facades: Degradation Kinetics in Soil.

Science.gov (United States)

Bollmann, Ulla E; Fernández-Calviño, David; Brandt, Kristian K; Storgaard, Morten S; Sanderson, Hans; Bester, Kai

2017-04-04

Biocides are common additives in building materials. In-can and film preservatives in polymer-resin render and paint, as well as wood preservatives are used to protect facade materials from microbial spoilage. Biocides leach from the facade material with driving rain, leading to highly polluted runoff water (up to several mg L -1 biocides) being infiltrated into the soil surrounding houses. In the present study the degradation rates in soil of 11 biocides used for the protection of building materials were determined in laboratory microcosms. The results show that some biocides are degraded rapidly in soil (e.g., isothiazolinones: T 1/2 soils; thus, rainfall events control how often new input to the soil occurs. Time intervals between rainfall events in Northern Europe are shorter than degradation half-lives even for many rapidly degraded biocides. Consequently, residues of some biocides are likely to be continuously present due to repeated input and most biocides can be considered as "pseudo-persistent"-contaminants in this context. This was verified by (sub)urban soil screening, where concentrations of up to 0.1 μg g -1 were detected for parent compounds as well as terbutryn degradation products in soils below biocide treated facades.

Microbial degradation of alpha-cypermethrin in soil by compound-specific stable isotope analysis

Energy Technology Data Exchange (ETDEWEB)

Xu, Zemin [MOE Key Laboratory of Environmental Remediation and Ecosystem Health, College of Environmental and Resource Sciences, Zhejiang University, Hangzhou 310058 (China); Shen, Xiaoli [MOE Key Laboratory of Environmental Remediation and Ecosystem Health, College of Environmental and Resource Sciences, Zhejiang University, Hangzhou 310058 (China); Department of Environmental Engineering, Quzhou University, Quzhou 324000 (China); Zhang, Xi-Chang [Laboratory for Teaching in Environmental and Resource Sciences, Zhejiang University, Hangzhou 310058 (China); Liu, Weiping [MOE Key Laboratory of Environmental Remediation and Ecosystem Health, College of Environmental and Resource Sciences, Zhejiang University, Hangzhou 310058 (China); Yang, Fangxing, E-mail: fxyang@zju.edu.cn [MOE Key Laboratory of Environmental Remediation and Ecosystem Health, College of Environmental and Resource Sciences, Zhejiang University, Hangzhou 310058 (China); Department of Effect-Directed Analysis, Helmholtz Center for Environmental Research – UFZ, Leipzig 04318 (Germany)

2015-09-15

Highlights: • Alpha-cypermethrin (α-CP) can be degraded by microorganisms in soil. • Biodegradation of α-CP resulted in carbon isotope fractionation. • A relationship was found between carbon isotope ratios and concentrations of α-CP. • An enrichment factor ϵ of α-CP was determined as −1.87‰. • CSIA is applicable to assess biodegradation of α-CP. - Abstract: To assess microbial degradation of alpha-cypermethrin in soil, attenuation of alpha-cypermethrin was investigated by compound-specific stable isotope analysis. The variations of the residual concentrations and stable carbon isotope ratios of alpha-cypermethrin were detected in unsterilized and sterilized soils spiked with alpha-cypermethrin. After an 80 days’ incubation, the concentrations of alpha-cypermethrin decreased to 0.47 and 3.41 mg/kg in the unsterilized soils spiked with 2 and 10 mg/kg, while those decreased to 1.43 and 6.61 mg/kg in the sterilized soils. Meanwhile, the carbon isotope ratios shifted to −29.14 ± 0.22‰ and −29.86 ± 0.33‰ in the unsterilized soils spiked with 2 and 10 mg/kg, respectively. The results revealed that microbial degradation contributed to the attenuation of alpha-cypermethrin and induced the carbon isotope fractionation. In order to quantitatively assess microbial degradation, a relationship between carbon isotope ratios and residual concentrations of alpha-cypermethrin was established according to Rayleigh equation. An enrichment factor, ϵ = −1.87‰ was obtained, which can be employed to assess microbial degradation of alpha-cypermethrin. The significant carbon isotope fractionation during microbial degradation suggests that CSIA is a proper approach to qualitatively detect and quantitatively assess the biodegradation during attenuation process of alpha-cypermethrin in the field.

Degradation of dimethyl disulphide in soil with or without biochar amendment.

Science.gov (United States)

Han, Dawei; Yan, Dongdong; Cao, Aocheng; Fang, Wensheng; Liu, Pengfei; Li, Yuan; Ouyang, Canbin; Wang, Qiuxia

2017-09-01

Dimethyl disulphide (DMDS) is a new and effective alternative to methyl bromide for soil fumigation. The effect of biochar on the fate of DMDS in soil is not fully understood. The objective of this study was to determine the degradation kinetics of DMDS in different soils and evaluate the effect of biochar amendment on DMDS degradation using incubation experiments. The degradation half-life of DMDS was between 1.05 and 6.66 days under non-sterile conditions, and 12.63 to 22.67 days under sterile conditions in five types of soil. Seven out of the eight tested biochar amendments (BC-2 to BC-8) delayed the degradation of DMDS in soil, increasing the half-life of DMDS in Fangshan soil from 1.05 to 1.16-5.87 days following amendment with 1% (w/w) biochar. The degradation rate of DMDS in Fangshan soil accelerated as the amendment rate of BC-1 increased, and decreased as the amendment rate of BC-7 increased. Biodegradation is an important degradation route for DMDS in soil, and DMDS degraded faster in alkaline soil. The effects of biochar amendments on DMDS degradation in soil are determined by complex multiple factors (such as surface area, pH and physicochemical composition), rather than by any single property of biochar. © 2017 Society of Chemical Industry. © 2017 Society of Chemical Industry.

Sorption, degradation and leaching of pesticides in soils amended with organic matter: A review

Directory of Open Access Journals (Sweden)

Fardin Sadegh-Zadeh

2017-04-01

Full Text Available The use of pesticides in modern agriculture is unavoidable because they are required to control weeds. Pesticides are poisonous; hence, they are dangerous if misused. Understanding the fate of pesticides will be useful to use them safely. Therefore, contaminations of water and soil resources could be avoided. The fates of pesticides in soils are influenced by their sorption, decomposition and movement. Degradation and leaching of pesticides are control by sorption. Soil organic matter and clay content are main soil constituents that have a high capacity for sorption of pesticides. Addition of organic maters to amend the soils is a usual practice that every year has been done in a huge area of worldwide.  The added organic amendments to the soils affect the fate of pesticides in soils as well. Pesticides fates in different soils are different. The addition of organic matter to soils causes different fates for pesticides as well. It is known from the studies that sorption of non-ionic pesticides by soil in aqueous system is controlled mainly by the organic matter content of the soils. Sorption of pesticides has been reported to increase by amending soils with organic matter. In general, conditions that promote microbial activity enhance the rate of pesticides degradation, and those that inhibit the growth of microorganisms reduce the rate of degradation. Amendment of soils with organic matter may modify leaching of pesticides in soil. Some studies showed that organic matter added to soils reduced pesticides in ground water. Generally, organic amendments induces the restriction of pesticides leaching in soils.

Degradation of tetraethyllead in leaded gasoline contaminated and uncontaminated soils

International Nuclear Information System (INIS)

Ou, L.; Jing, W.; Thomas, J.; Mulroy, P.

1995-01-01

For over 50 years, since its introduction in 1923 by General Motors, tetraethyllead (TEL) was the major antiknock agent used in leaded gasoline. Since the middle of 1970, use of leaded gasoline in automobiles was gradually phased out. The main objective of this study is to determine the degradation rates and metabolites of TEL in gasoline contaminated and uncontaminated soils. TEL in uncontaminated soils disappeared rapidly. Ionic triethyllead (TREL) was the major organolead metabolite in these soils, with ionic diethyllead (DEL) being the minor product. Nonsterile soils, but not autoclaved soils, had limited capacity to mineralize 14 C-TEL to 14 CO 2 , H 2 0, and Pb 2+ . Unlike TEL in uncontaminated soils, petroleum hydrocarbons protected TEL in leaded gasoline contaminated soils from being degraded. Both disappearance and mineralization rates of TEL in leaded gasoline contaminated soils decreased with the increase in gasoline concentration. It appears that TEL in leaded gasoline contaminated soils is relatively stable until the level of petroleum hydrocarbons falls below a critical value. TEL is then rapidly degraded. Hydrocarbon degrading microorganisms may be involved, to some extent, in the degradation of TEL

SYSTEMIC APPROACH AND ROUGHNESS APPLICATION TO CAUSE EMERGING PROPERTIES IN THE RESTORATION OF DEGRADED SOILS

Directory of Open Access Journals (Sweden)

Juarês José Aumond

2014-09-01

Full Text Available http://dx.doi.org/10.5902/1980509815737Based on the general systems theory, an ecological model for the restoration of ecosystems has been developed, which soils are highly degraded, and treating the ecosystem as a complex dynamic system, hyper-sensitive to initial conditions of soil preparation. Assuming that degraded ecosystems are sensitive to initial conditions of soil preparation, the technique of roughness was evaluated (relief variations alternating between concave and convex surfaces to trigger over time emergent properties that accelerate the process of ecological restoration. The degraded ecosystems can be understood as organizationally open systems, as a dissipative structure, in which irreversibly matter and energy flow. The main task in ecological restoration in areas that had the soil degraded is to achieve the internalization of matter and energy to induce the system to organizational closure. The roughness, represented by soil micro-topography is an effective technique in the internalization of matter, retaining water, sediment, organic matter, nutrients and seeds. Variations of relief trigger environmental changes over time in a dynamic and heterogeneous way, which influence the interactions between solar radiation, moisture and nutrients, creating different opportunities for plants and animal species. There must be an oriented concentration to flow structures and processes between the degraded ecosystem (system and the environment (neighborhood. In this approach, a particular concentration on the interrelationships between the system and the environment is dedicated. For ecological restoration, whose area is with degraded soil, such as mining and ranching, a new integrative degraded systemic approach is proposed, in which the roughness of the soil might trigger spatial and temporal patterns and emergent environmental properties due to the hyper-sensitivity to initial conditions of the land preparation.

Degradation of ¹³C-labeled pyrene in soil-compost mixtures and fertilized soil.

Science.gov (United States)

Adam, Iris K U; Miltner, Anja; Kästner, Matthias

2015-11-01

Polycyclic aromatic hydrocarbons (PAH) are toxic pollutants widely distributed in the environment due to natural and anthropogenic processes. In order to mitigate tar oil contaminations with PAH, research on improving bioremediation approaches, which are sometimes inefficient, is needed. However, the knowledge on the fate of PAH-derived carbon and the microbial degraders in particular in compost-supplemented soils is still limited. Here we show the PAH carbon turnover mass balance in microcosms with soil-compost mixtures or in farmyard fertilized soil using [(13)C6]-pyrene as a model PAH. Complete pyrene degradation of 100 mg/kg of soil was observed in all supplemented microcosms within 3 to 5 months, and the residual (13)C was mainly found as carbon converted to microbial biomass. Long-term fertilization of soil with farmyard manure resulted in pyrene removal efficiency similar to compost addition, although with a much longer lag phase, higher mineralization, and lower carbon incorporation into the biomass. Organic amendments either as long-term manure fertilization or as compost amendment thus play a key role in increasing the PAH-degrading potential of the soil microbial community. Phospholipid fatty acid stable isotope probing (PLFA-SIP) was used to trace the carbon within the microbial population and the amount of biomass formed from pyrene degradation. The results demonstrate that complex microbial degrader consortia rather than the expected single key players are responsible for PAH degradation in organic-amended soil.

Combating land degradation: the potential of soil reconversion

Science.gov (United States)

Tobias, Silvia; Conen, Franz; Duss, Adrian; Wenzel, Leonore; Buser, Christine; Alewell, Christine

2017-04-01

Land degradation is usually not seen as a major problem in industrialised countries, although continuous soil sealing for human settlements and infrastructure entails the loss of agricultural land, landscape fragmentation and the loss of natural habitats. In many European countries, land-take on greenfields is unbowed, while, at the same time, there is a considerable number of unused brownfields, like abandoned rail yards and industrial or military sites. In addition, many new by-pass roads have been constructed to take up the volume of traffic and unburden the towns and villages from traffic emissions, but the old roads are rarely downgraded or reconverted and risk being used as shortcuts. Today the sealed area exceeds the requirements of the current generation and contributes to degraded land with heavily disturbed soil-borne ecosystem services. Soil reconversion, i.e. replacing a sealed surface with soil to restore ecosystem services, could mitigate this unsustainable trend that restricts the options of future generations. This contribution discusses the potential and challenges of soil reconversion to reduce net soil loss. The expanses of brownfield area vary between countries, whereas the rate of new soil sealing is still high in most countries and soil reconversion should be considered more. Our research revealed that the current techniques enable successful restoration of agricultural soils and pioneer habitats on site. However, reconverting single small areas can hardly mitigate landscape fragmentation at a regional scale. The same principle prevails as for soil sealing, but in the inverse way: the benefit of soil reconversion may appear small for single cases, but in the sum soil reconversion might be effective. Today, many brownfield areas stay sealed because of economic and political reasons, or because the potential benefit from restoring ecosystem services at these brownfield sites is not known. We developed a mapping approach to assess the potential

Plant species influence on soil C after afforestation of Mediterranean degraded soils

Science.gov (United States)

Dominguez, Maria T.; García-Vargas, Carlos; Madejón, Engracia; Marañón, Teodoro

2015-04-01

Increasing C sequestration in terrestrial ecosystems is one of the main current environmental challenges to mitigate climate change. Afforestation of degraded and contaminated lands is one of the key strategies to achieve an increase in C sequestration in ecosystems. Plant species differ in their mechanisms of C-fixation, C allocation into different plant organs, and interaction with soil microorganisms, all these factors influencing the dynamics of soil C following the afforestation of degraded soils. In this work we examine the influence of different woody plant species on soil C dynamics in degraded and afforested Mediterranean soils. The soils were former agricultural lands that were polluted by a mining accident and later afforested with different native plant species. We analysed the effect of four of these species (Olea europaea var. sylvestris Brot., Populus alba L., Pistacia lentiscus L. and Retama sphaerocarpa (L.) Boiss.) on different soil C fractions, soil nutrient availability, microbial activity (soil enzyme activities) and soil CO2 fluxes 15 years after the establishment of the plantations. Results suggest that the influence of the planted trees and shrubs is still limited, being more pronounced in the more acidic and nutrient-poor soils. Litter accumulation varied among species, with the highest C accumulated in the litter under the deciduous species (Populus alba L.). No differences were observed in the amount of total soil organic C among the studied species, or in the concentrations of phenols and sugars in the dissolved organic C (DOC), which might have indicated differences in the biodegradability of the DOC. Microbial biomass and activity was highly influenced by soil pH, and plant species had a significant influence on soil pH in the more acidic site. Soil CO2 fluxes were more influenced by the plant species than total soil C content. Our results suggest that changes in total soil C stocks after the afforestation of degraded Mediterranean

Degradation of zearalenone and ochratoxin A in three Danish agricultural soils

DEFF Research Database (Denmark)

Mortensen, G.K.; Strobel, B.W.; Hansen, H.C.B.

2006-01-01

Degradation of two mycotoxins: zearalenone (ZON) produced by species of Fusarium and ochratoxin A (OTA) produced by species of Penicillium were followed in pot experiments using agricultural topsoils from Danish experimental farms: a sandy soil, a sandy clay soil and a gyttja soil with a high...... content of silt. Experiments with unplanted soil and pots planted with barley were included. Soil samples were withdrawn during a period of 225 days and analysed for the content of OTA and ZON. The degradation of both toxins consisted of an initial fast degradation followed by a slower transformation step......, whereas the half-lives for OTA were about 0.2-1 day. The slowest degradation was measured in soil rich in clay. After 225 days, neither OTA nor ZON was detected in any of the soil types. Generally, the degradation of ZON and OTA was faster in planted soil than in unplanted soil, probably due to higher...

Assessment of potential soil degradation on agricultural land in the czech republic.

Science.gov (United States)

Šarapatka, Bořivoj; Bednář, Marek

2015-01-01

Many attempts have been made worldwide to develop methods to identify the areas most threatened by soil degradation. Some soils in afflicted areas may be irreversibly degraded and thus have very little resilience (the ability to restore themselves). For the purpose of assessing the current state of soil degradation in the Czech Republic (CZ) we have developed an overall indicator of land vulnerability to the threat of soil degradation on the basis of individual factors that contribute to soil degradation and are monitored on a long-term basis in various research worksites in the CZ. Individual degradation factors were divided into two groups: chemical and physical degradation. On the basis of principal component analysis, individual degradation factors were assigned a specific weight of influence. With the use of a GIS, the input factors of degradation were combined to create maps of chemical and physical soil degradation, and consequently a map of overall degradation-threatened soils for the CZ, along with a map of areas differentiated according to the prevailing type of degradation. Results showed that, at present, the most important degradation factor in the CZ is water erosion, followed by loss of organic matter. Statistical analysis showed that approximately 51% of agricultural land is moderately threatened in the CZ. Copyright © by the American Society of Agronomy, Crop Science Society of America, and Soil Science Society of America, Inc.

Insight in the PCB-degrading functional community in long-term contaminated soil under bioremediation

Energy Technology Data Exchange (ETDEWEB)

Petric, Ines; Hrsak, Dubravka; Udikovic-Kolic, Nikolina [Ruder Boskovic Inst., Division for Marine and Environmental Research, Zagreb (Croatia); Fingler, Sanja [Inst. for Medical Research and Occupational Health, Zagreb (Croatia); Bru, David; Martin-Laurent, Fabrice [INRA, Univ. der Bourgogne, Soil and Environmental Microbiology, Dijon (France)

2011-02-15

A small-scale bioremediation assay was developed in order to get insight into the functioning of a polychlorinated biphenyl (PCB) degrading community during the time course of bioremediation treatment of a contaminated soil. The study was conducted with the aim to better understand the key mechanisms involved in PCB-removal from soils. Materials and methods Two bioremediation strategies were applied in the assay: (a) biostimulation (addition of carvone as inducer of biphenyl pathway, soya lecithin for improving PCB bioavailability, and xylose as supplemental carbon source) and (b) bioaugmentation with selected seed cultures TSZ7 or Rhodococcus sp. Z6 originating from the transformer station soil and showing substantial PCB-degrading activity. Functional PCB-degrading community was investigated by using molecular-based approaches (sequencing, qPCR) targeting bphA and bphC genes, coding key enzymes of the upper biphenyl pathway, in soil DNA extracts. In addition, kinetics of PCBs removal during the bioremediation treatment was determined using gas chromatography mass spectrometry analyses. Results and discussion bphA-based phylogeny revealed that bioremediation affected the structure of the PCB-degrading community in soils, with Rhodococcus-like bacterial populations developing as dominant members. Tracking of this population further indicated that applied bioremediation treatments led to its enrichment within the PCB-degrading community. The abundance of the PCB-degrading community, estimated by quantifying the copy number of bphA and bphC genes, revealed that it represented up to 0.3% of the total bacterial community. All bioremediation treatments were shown to enhance PCB reduction in soils, with approximately 40% of total PCBs being removed during a 1-year period. The faster PCB reduction achieved in bioaugmented soils suggested an important role of the seed cultures in bioremediation processes. Conclusions The PCBs degrading community was modified in response to

Cheliensisin A (Chel A) induces apoptosis in human bladder cancer cells by promoting PHLPP2 protein degradation.

Science.gov (United States)

Zhang, Ruowen; Che, Xun; Zhang, Jingjie; Li, Yang; Li, Jingxia; Deng, Xu; Zhu, Junlan; Jin, Honglei; Zhao, Qinshi; Huang, Chuanshu

2016-10-11

Cheliensisin A (Chel A), a styryl-lactone compound extracted from Goniothalamus cheliensis, is reported to have significant anti-cancer effects in various cancer cells. Here we demonstrated that Chel A treatment resulted in apoptosis and an inhibition of anchorage-independent growth in human bladder cancer T24, T24T and U5637 cells. Mechanistic studies showed that such effect is mediated by PH domain and Leucine rich repeat Protein Phosphatases (PHLPP2) protein. Chel A treatment led to PHLPP2 degradation and subsequently increased in c-Jun phosphorylation. Moreover PHLPP2 degradation could be attenuated by inhibition of autophagy, which was mediated by Beclin 1. Collectively, we discover that Chel A treatment induces Beclin-dependent autophagy, consequently mediates PHLPP2 degradation and JNK/C-Jun phosphorylation and activation, further in turn contributing to apoptosis in human bladder cancer cells. Current studies provide a significant insight into understanding of anticancer effect of Chel A in treatment of human bladder cancer.

Soil, Food Security and Human Health

Science.gov (United States)

Oliver, Margaret

2017-04-01

"Upon this handful of soil our survival depends. Husband it and it will grow food, our fuel, and our shelter and surround us with beauty. Abuse it and the soil will collapse and die, taking humanity with it" Vedas Sanskrit Scripture, 1500 BC. As the world's population increases issues of food security become more pressing as does the need to sustain soil fertility and to minimize soil degradation. Soil and land are finite resources, and agricultural land is under severe competition from many other uses. Lack of adequate food and food of poor nutritional quality lead to under-nutrition of different degrees, all of which can cause ill- or suboptimal-health. The soil can affect human health directly and indirectly. Direct effects of soil or its constituents result from its ingestion, inhalation or absorption. For example, hook worms enter the body through the skin and cause anaemia, and fungi and dust can be inhaled resulting in respiratory problems. The soil is the source of actinomycetes on which our earliest antibiotics are based (actinomycin, neomycin and streptomycin). Furthermore, it is a potential reservoir of new antibiotics with methods such as functional metagenomics to identify antibiotic resistant genes. Indirect effects of soil arise from the quantity and quality of food that humans consume. Trace elements can have both beneficial and toxic effects on humans, especially where the range for optimal intake is narrow as for selenium. Deficiencies of four trace elements, iodine, iron, selenium and zinc, will be considered because of their substantial effects on human health. Relations between soil and human health are often difficult to extricate because of the many confounding factors present such as the source of food, social factors and so on. Nevertheless, recent scientific understanding of soil processes and factors that affect human health are enabling greater insight into the effects of soil on our health. Multidisciplinary research that includes soil

Bio stimulation for the Enhanced Degradation of Herbicides in Soil

International Nuclear Information System (INIS)

Kanissery, R.G; Sims, G.K

2011-01-01

Cleanup of herbicide-contaminated soils has been a dire environmental concern since the advent of industrial era. Although microorganisms are excellent degraders of herbicide compounds in the soil, some reparation may need to be brought about, in order to stimulate them to degrade the herbicide at a faster rate in a confined time frame. Bio stimulation through the appropriate utilization of organic amendments and nutrients can accelerate the degradation of herbicides in the soil. However, effective use of bio stimulants requires thorough comprehension of the global redox cycle during the microbial degradation of the herbicide molecules in the soil. In this paper, we present the prospects of using bio stimulation as a powerful remediation strategy for the rapid cleanup of herbicide-polluted soils.

Clay minerals and metal oxides strongly influence the structure of alkane-degrading microbial communities during soil maturation.

Science.gov (United States)

Steinbach, Annelie; Schulz, Stefanie; Giebler, Julia; Schulz, Stephan; Pronk, Geertje J; Kögel-Knabner, Ingrid; Harms, Hauke; Wick, Lukas Y; Schloter, Michael

2015-07-01

Clay minerals, charcoal and metal oxides are essential parts of the soil matrix and strongly influence the formation of biogeochemical interfaces in soil. We investigated the role of these parental materials for the development of functional microbial guilds using the example of alkane-degrading bacteria harbouring the alkane monooxygenase gene (alkB) in artificial mixtures composed of different minerals and charcoal, sterile manure and a microbial inoculum extracted from an agricultural soil. We followed changes in abundance and community structure of alkane-degrading microbial communities after 3 and 12 months of soil maturation and in response to a subsequent 2-week plant litter addition. During maturation we observed an overall increasing divergence in community composition. The impact of metal oxides on alkane-degrading community structure increased during soil maturation, whereas the charcoal impact decreased from 3 to 12 months. Among the clay minerals illite influenced the community structure of alkB-harbouring bacteria significantly, but not montmorillonite. The litter application induced strong community shifts in soils, maturated for 12 months, towards functional guilds typical for younger maturation stages pointing to a resilience of the alkane-degradation function potentially fostered by an extant 'seed bank'.

Tributyltin induces mitochondrial fission through Mfn1 degradation in human induced pluripotent stem cells.

Science.gov (United States)

Yamada, Shigeru; Asanagi, Miki; Hirata, Naoya; Itagaki, Hiroshi; Sekino, Yuko; Kanda, Yasunari

2016-08-01

Organotin compounds, such as tributyltin (TBT), are well-known endocrine disruptors. TBT is also known to cause various forms of cytotoxicity, including neurotoxicity and immunotoxicity. However, TBT toxicity has not been identified in normal stem cells. In the present study, we examined the effects of TBT on cell growth in human induced pluripotent stem cells (iPSCs). We found that exposure to nanomolar concentrations of TBT decreased intracellular ATP levels and inhibited cell viability in iPSCs. Because TBT suppressed energy production, which is a critical function of the mitochondria, we further assessed the effects of TBT on mitochondrial dynamics. Staining with MitoTracker revealed that nanomolar concentrations of TBT induced mitochondrial fragmentation. TBT also reduced the expression of mitochondrial fusion protein mitofusin 1 (Mfn1), and this effect was abolished by knockdown of the E3 ubiquitin ligase membrane-associated RING-CH 5 (MARCH5), suggesting that nanomolar concentrations of TBT could induce mitochondrial dysfunction via MARCH5-mediated Mfn1 degradation in iPSCs. Thus, mitochondrial function in normal stem cells could be used to assess cytotoxicity associated with metal exposure. Copyright © 2016 Elsevier Ltd. All rights reserved.

Degradation of N-nitrosodimethylamine (NDMA) in landscape soils.

Science.gov (United States)

Yang, W C; Gan, J; Liu, W P; Green, R

2005-01-01

N-nitrosodimethylamine (NDMA), a potential carcinogen, was commonly found in treated wastewater as a by-product of chlorination. As treated water is increasingly used for landscape irrigation, there is an imperative need to understand the leaching risk for NDMA in landscape soils. In this study, adsorption and incubation experiments were conducted using landscape soils planted with turfgrass, ground cover, and trees. Adsorption of NDMA was negligibly weak (K(d) NDMA has a high potential for moving with percolating water in these soils. Degradation of NDMA occurred at different rates among these soils. At 21 degrees C, the half-life (t(1/2)) of NDMA was 4.1 d for the ground cover soil, 5.6 d for the turfgrass soil, and 22.5 d for the tree soil. The persistence was substantially prolonged after autoclaving or when incubated at 10 degrees C. The rate of degradation was not significantly affected by the initial NDMA concentration or addition of organic and inorganic nutrient sources. The relative persistence was inversely correlated with soil organic matter content, soil microbial biomass, and soil dehydrogenase activity, suggesting the importance of microorganisms in NDMA degradation in these soils. These results suggest that the behavior of NDMA depends closely on the vegetation cover in a landscape system, and prolonged persistence and increased leaching may be expected in soils with sparse vegetation due to low organic matter content and limited microbial activity.

Soil Resources Degradation and Conservation Techniques Adopted ...

African Journals Online (AJOL)

Soil degradation is increasingly regarded as a major constraint to food production in the tropics. This problem is primarily caused by soil erosion, which particularly damages the soil surfaces. It is therefore the objectives of this paper to study the types of erosion in Gusau area as well as its effects on selected soil properties ...

Application of terpene-induced cell for enhancing biodegradation of TCE contaminated soil

Directory of Open Access Journals (Sweden)

Ekawan Luepromchai

2004-02-01

Full Text Available Trichloroethylene (TCE, a chlorinated solvent, is a major water pollutant originating from spillage and inappropriate disposal of dry cleaning agents, degreasing solvents, and paint strippers. Due to its widespread contamination and potential health threat, remediation technology to clean-up TCE is necessary. Aerobic biodegradation of TCE is reported to occur via cometabolism, by which TCE degrading bacteria utilize other compounds such as toluene, phenol, and methane as growth substrate and enzyme inducer. Although toluene is reported to be the most effective inducer, it is regulated as a hazardous material and should not be applied to the environment. The objectives of this study were to identify an alternative enzyme inducer as well as to apply the induced bacteria for degradation of TCE in contaminated soil. We investigated the effect of terpenes, the main components in volatile essential oils of plants, on induction of TCE degradation in Rhodococcus gordoniae P3, a local Gram (+ bacterium. Selected terpenes including cumene, limonene, carvone and pinene at various concentrations were used in the study. Results from liquid culture showed that 25 mg l-1 cumeneinduced R. gordoniae P3 cells resulted in 75% degradation of 10 ppm TCE within 24 hrs. Soil microcosms were later employed to investigate the ability of cumene to enhance TCE biodegradation in the environment. There were two bioremediation treatments studied, including bioaugmentation, the inoculation of cumeneinduced R. gordoniae P3, and biostimulation, the addition of cumene to induce soil indigenous microorganisms to degrade TCE. Bioaugmentation and biostimulation were shown to accelerate TCE reduction significantly more than control treatment at the beginning of study. The results suggest that cumene-induced R. gordoniae P3 and cumene can achieve rapid TCE biodegradation.

Soil bacterial diversity in degraded and restored lands of Northeast Brazil.

Science.gov (United States)

Araújo, Ademir Sérgio Ferreira; Borges, Clovis Daniel; Tsai, Siu Mui; Cesarz, Simone; Eisenhauer, Nico

2014-11-01

Land degradation deteriorates biological productivity and affects environmental, social, and economic sustainability, particularly so in the semi-arid region of Northeast Brazil. Although some studies exist reporting gross measures of soil microbial parameters and processes, limited information is available on how land degradation and restoration strategies influence the diversity and composition of soil microbial communities. In this study we compare the structure and diversity of bacterial communities in degraded and restored lands in Northeast Brazil and determine the soil biological and chemical properties influencing bacterial communities. We found that land degradation decreased the diversity of soil bacteria as indicated by both reduced operational taxonomic unit (OTU) richness and Shannon index. Soils under native vegetation and restoration had significantly higher bacterial richness and diversity than degraded soils. Redundancy analysis revealed that low soil bacterial diversity correlated with a high respiratory quotient, indicating stressed microbial communities. By contrast, soil bacterial communities in restored land positively correlated with high soil P levels. Importantly, however, we found significant differences in the soil bacterial community composition under native vegetation and in restored land, which may indicate differences in their functioning despite equal levels of bacterial diversity.

Microbial degradation of sulfentrazone in a Brazilian rhodic hapludox soil

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Camila O. Martinez

2010-03-01

Full Text Available Sulfentrazone is amongst the most widely used herbicides for treating the main crops in the State of São Paulo, Brazil, but few studies are available on the biotransformation of this compound in Brazilian soils. Soil samples of Rhodic Hapludox soil were supplemented with sulfentrazone (0.7 µg active ingredient (a.i. g-1 soil and maintained at 27ºC. The soil moisture content was corrected to 30, 70 or 100 % water holding capacity (WHC and maintained constant until the end of the experimental period. Herbicide-free soil samples were used as controls. Another experiment was carried out using soil samples maintained at a constant moisture content of 70% WHC, supplemented or otherwise with the herbicide, and submitted to different temperatures of 15, 30 and 40º C. In both experiments, aliquots were removed after various incubation periods for the quantitative analysis of sulfentrazone residues by gas chromatography. Herbicide-degrading microorganisms were isolated and identified. After 120 days a significant effect on herbicide degradation was observed for the factor of temperature, degradation being higher at 30 and 40º C. A half-life of 91.6 days was estimated at 27º C and 70 % WHC. The soil moisture content did not significantly affect sulfentrazone degradation and the microorganisms identified as potential sulfentrazone degraders were Nocardia brasiliensis and Penicillium sp. The present study enhanced the prospects for future studies on the bio-prospecting for microbial populations related to the degradation of sulfentrazone, and may also contribute to the development of strategies for the bioremediation of sulfentrazone-polluted soils.

Strong Impact on the Polycyclic Aromatic Hydrocarbon (PAH)-Degrading Community of a PAH-Polluted Soil but Marginal Effect on PAH Degradation when Priming with Bioremediated Soil Dominated by Mycobacteria

DEFF Research Database (Denmark)

Johnsen, Anders R.; Schmidt, Stine; Hybholdt, Trine K.

2007-01-01

Bioaugmentation of soil polluted with polycyclic aromatic hydrocarbons (PAHs) is often disappointing because of the low survival rate and low activity of the introduced degrader bacteria. We therefore investigated the possibility of priming PAH degradation in soil by adding 2% of bioremediated soil...... with a high capacity for PAH degradation. The culturable PAH-degrading community of the bioremediated primer soil was dominated by Mycobacterium spp. A microcosm containing pristine soil artificially polluted with PAHs and primed with bioremediated soil showed a fast, 100- to 1,000-fold increase in numbers...... of culturable phenanthrene-, pyrene-, and fluoranthene degraders and a 160-fold increase in copy numbers of the mycobacterial PAH dioxygenase gene pdo1. A nonpolluted microcosm primed with bioremediated soil showed a high rate of survival of the introduced degrader community during the 112 days of incubation...

Carbazole degradation in the soil microcosm by tropical bacterial strains

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Lateef B. Salam

2015-01-01

Full Text Available In a previous study, three bacterial strains isolated from tropical hydrocarbon-contaminated soils and phylogenetically identified as Achromobacter sp. strain SL1, Pseudomonassp. strain SL4 and Microbacterium esteraromaticum strain SL6 displayed angular dioxygenation and mineralization of carbazole in batch cultures. In this study, the ability of these isolates to survive and enhance carbazole degradation in soil were tested in field-moist microcosms. Strain SL4 had the highest survival rate (1.8 x 107 cfu/g after 30 days of incubation in sterilized soil, while there was a decrease in population density in native (unsterilized soil when compared with the initial population. Gas chromatographic analysis after 30 days of incubation showed that in sterilized soil amended with carbazole (100 mg/kg, 66.96, 82.15 and 68.54% were degraded by strains SL1, SL4 and SL6, respectively, with rates of degradation of 0.093, 0.114 and 0.095 mg kg−1 h−1. The combination of the three isolates as inoculum in sterilized soil degraded 87.13% carbazole at a rate of 0.121 mg kg−1 h−1. In native soil amended with carbazole (100 mg/kg, 91.64, 87.29 and 89.13% were degraded by strains SL1, SL4 and SL6 after 30 days of incubation, with rates of degradation of 0.127, 0.121 and 0.124 mg kg−1h−1, respectively. This study successfully established the survivability (> 106 cfu/g detected after 30 days and carbazole-degrading ability of these bacterial strains in soil, and highlights the potential of these isolates as seed for the bioremediation of carbazole-impacted environments.

Relationships between physical-geographical factors and soil degradation on agricultural land.

Science.gov (United States)

Bednář, Marek; Šarapatka, Bořivoj

2018-07-01

It is a well-known fact that soil degradation is dramatically increasing and currently threatens agricultural soils all around the world. The objective of this study was to reveal the possible connection between soil degradation and seven physical-geographical factors - slope steepness, altitude, elevation differences, rainfall, temperature, soil texture and solar radiation - in the form of threshold values (if these exist), where soil degradation begins and ends. The analysis involved the whole area of the Czech Republic which consists of 13,027 cadasters (78,866 km 2 ). The greatest total degradation threat occurs in areas with slope steepness >7 degrees, average annual temperature 10.54, altitude >766 m a.s.l. Similarly, the results for water erosion, wind erosion, soil compaction, loss of organic matter, acidification and heavy metal contamination were processed. The results enable us to identify the relationships of different levels of threats which could consequently be used in various ways - for classification of threatened areas, for more effective implementation of anti-degradation measures, or purely for a better understanding of the role of physical geographical factors in soil degradation in the Czech Republic, and thus could increase the chances of reducing vulnerability to land degradation not only in the Czech Republic. Copyright © 2018 Elsevier Inc. All rights reserved.

Chiral separation and enantioselective degradation of vinclozolin in soils.

Science.gov (United States)

Liu, Hui; Liu, Donghui; Shen, Zhigang; Sun, Mingjing; Zhou, Zhiqiang; Wang, Peng

2014-03-01

Vinclozolin is a chiral fungicide with potential environmental problems. The chiral separation of the enantiomers and enantioselective degradation in soil were investigated in this work. The enantiomers were separated by high-performance liquid chromatography (HPLC) on Chiralpak IA, IB, and AZ-H chiral columns under normal phase and the influence of the mobile phase composition on the separation was also studied. Complete resolutions were obtained on all three chiral columns under optimized conditions with the same elution order of (+)/(-). The residual analysis of the enantiomers in soil was conducted using accelerate solvent extraction followed by HPLC determination. The recoveries of the enantiomers ranged from 85.7-105.7% with relative standard deviation (SD) of 0.12-3.83%, and the limit of detection (LOD) of the method was 0.013 µg/g. The results showed that the degradations of vinclozolin enantiomers in the soils followed first-order kinetics. Preferential degradation of the (-)-enantiomer was observed only in one soil with the largest |ES| value of 0.047, and no obvious enantioselective degradation was observed in other soils. It was found that the persistence of vinclozolin in soil was related to pH values based on the half-lives. The two enantiomers disappeared about 8 times faster in basic soils than that in neutral or acidic soils. © 2014 Wiley Periodicals, Inc.

Silencing of microRNA-138-5p promotes IL-1β-induced cartilage degradation in human chondrocytes by targeting FOXC1: miR-138 promotes cartilage degradation.

Science.gov (United States)

Yuan, Y; Zhang, G Q; Chai, W; Ni, M; Xu, C; Chen, J Y

2016-10-01

Osteoarthritis (OA) is characterised by articular cartilage degradation. MicroRNAs (miRNAs) have been identified in the development of OA. The purpose of our study was to explore the functional role and underlying mechanism of miR-138-5p in interleukin-1 beta (IL-1β)-induced extracellular matrix (ECM) degradation of OA cartilage. Human articular cartilage was obtained from patients with and without OA, and chondrocytes were isolated and stimulated by IL-1β. The expression levels of miR-138-5p in cartilage and chondrocytes were both determined. After transfection with miR-138-5p mimics, allele-specific oligonucleotide (ASO)-miR-138-5p, or their negative controls, the messenger RNA (mRNA) levels of aggrecan (ACAN), collagen type II and alpha 1 (COL2A1), the protein levels of glycosaminoglycans (GAGs), and both the mRNA and protein levels of matrix metalloproteinase (MMP)-13 were evaluated. Luciferase reporter assay, quantitative real-time polymerase chain reaction (qRT-PCR), and Western blot were performed to explore whether Forkhead Box C1 (FOCX1) was a target of miR-138-5p. Further, we co-transfected OA chondrocytes with miR-138-5p mimics and pcDNA3.1 (+)-FOXC1 and then stimulated with IL-1β to determine whether miR-138-5p-mediated IL-1β-induced cartilage matrix degradation resulted from targeting FOXC1. MiR-138-5p was significantly increased in OA cartilage and in chondrocytes in response to IL-1β-stimulation. Overexpression of miR-138-5p significantly increased the IL-1β-induced downregulation of COL2A1, ACAN, and GAGs, and increased the IL-1β-induced over expression of MMP-13.We found that FOXC1 is directly regulated by miR-138-5p. Additionally, co-transfection with miR-138-5p mimics and pcDNA3.1 (+)-FOXC1 resulted in higher levels of COL2A1, ACAN, and GAGs, but lower levels of MMP-13. miR-138-5p promotes IL-1β-induced cartilage degradation in human chondrocytes, possibly by targeting FOXC1.Cite this article: Y. Yuan, G. Q. Zhang, W. Chai,M. Ni, C. Xu, J

Fire effects on soils: the human dimension.

Science.gov (United States)

Santín, Cristina; Doerr, Stefan H

2016-06-05

Soils are among the most valuable non-renewable resources on the Earth. They support natural vegetation and human agro-ecosystems, represent the largest terrestrial organic carbon stock, and act as stores and filters for water. Mankind has impacted on soils from its early days in many different ways, with burning being the first human perturbation at landscape scales. Fire has long been used as a tool to fertilize soils and control plant growth, but it can also substantially change vegetation, enhance soil erosion and even cause desertification of previously productive areas. Indeed fire is now regarded by some as the seventh soil-forming factor. Here we explore the effects of fire on soils as influenced by human interference. Human-induced fires have shaped our landscape for thousands of years and they are currently the most common fires in many parts of the world. We first give an overview of fire effect on soils and then focus specifically on (i) how traditional land-use practices involving fire, such as slash-and-burn or vegetation clearing, have affected and still are affecting soils; (ii) the effects of more modern uses of fire, such as fuel reduction or ecological burns, on soils; and (iii) the ongoing and potential future effects on soils of the complex interactions between human-induced land cover changes, climate warming and fire dynamics.This article is part of the themed issue 'The interaction of fire and mankind'. © 2016 The Author(s).

Effect of soil compaction on the degradation and ecotoxicological impact of isoproturon

Science.gov (United States)

Mamy, L.; Vrignaud, P.; Cheviron, N.; Perreau, F.; Belkacem, M.; Brault, A.; Breuil, S.; Delarue, G.; Touton, I.; Chaplain, V.

2009-04-01

Soil is essentially a non-renewable resource which performs many functions and delivers services vital to human activities and ecosystems survival. However the capacity of soil to keep on fully performing its broad variety of crucial functions is damaged by several threats and, among them, chemical contamination by pesticides and compaction due to intensive agriculture practices. How these two threats could interact is largely unknown: compaction may modify the fate of pesticides in soil therefore their effects on the biological functioning of soil. The aim of this work was to study the effect of soil compaction on (1) the degradation of one herbicide, isoproturon (2) the ecotoxicological impact of this herbicide measured through two enzyme activities involved in C (beta-glucosidase) and N (urease) cycles in soil. Undisturbed soil cylinders were sampled in the 2-4 cm layer of La Cage experimental site (INRA, Versailles, France), under intensive agriculture practices. Several soil samples were prepared with different bulk density then treated with isoproturon (IPU). The samples were incubated at 18 ± 1°C in darkness for 63 days. At 0, 2, 7, 14, 28 and 63 days, the concentrations of isoproturon and of two of its main metabolites in soil (monodesmethyl-isoproturon, IPPMU; didesmethyl-isoproturon, IPPU), and the enzyme activities were measured. The results showed that there was no significant difference in IPU degradation under no and moderate soil compaction. IPU was less persistent in the highly compacted soil, but this soil had also higher humidity which is known to increase the degradation. Only one metabolite, IPPMU, was detected independently of the conditions of compaction. The compaction did not modify the effect of IPU on beta-glucosidase and urease activities in the long term, but microbial communities were probably the same in all the soil samples that were initially not compacted. The communities developed in durably compacted zones in the field are

Degradation of a chiral nonylphenol isomer in two agricultural soils

International Nuclear Information System (INIS)

Zhang Haifeng; Spiteller, Michael; Guenther, Klaus; Boehmler, Gabriele; Zuehlke, Sebastian

2009-01-01

The degradation of a chiral nonylphenol isomer, 4-(1-ethyl-1,4-dimethylpentyl)phenol (NP 112 ), in two agricultural soils from Monheim and Dortmund, Germany has been studied. The degradation of NP 112 and the formation of a nitro-nonylphenol metabolite were determined by means of GC-MS analysis. The degradation followed bi-exponential order kinetics, with half-life of less than 5 days in both soils. The nitro-metabolite was found at different concentration levels in the two soils. The nitro-metabolite of NP 112 was more persistent than its parent compound. After 150 days about 13% of the initially applied NP 112 remained in the Monheim soil as its nitro-metabolite. Results of the E-screen assay revealed that the nitro-NP 112 has oestrogenic potency of 85% of that of NP 112 . Furthermore, the results of chiral GC-MS analysis revealed that no chiral degradation of NP 112 occurred in this study. - The degradation of a chiral nonylphenol isomer in agricultural soils followed bi-exponential order kinetics resulting in a more persistent nitro-metabolite.

Study on degradation of dimefuron in soil by nuclear technique

International Nuclear Information System (INIS)

Pakkong, P.; Vadeilai, J.

1996-01-01

Study on degradation of herbicide dimefuron in soil by using bio meter flask experiment was conducted under laboratory condition, 14 C-dimefuron was applied to three conditions of sterile soil normal and bio fertilizer added soil. Every month 14 CO 2 was collected from 1 N KOH in bio meter flask with in eight months period. Carbon-14 activity was analyzed by liquid scintillation counter. The result of dimefuron degradation as 14 CO 2 in sterile normal and bio fertilizer added soil were 0.96 percent 6.31 percent and 9.36 percent. It can be concluded that increasing in dimefuron degradation rate was involved by micro-organism activity. After eight month extracted and bounded residue of dimefuron in soil were analysed. Radioassay show that extracted and bounded residue were 58.62 and 29.58 percent in sterile soil 45.73 and 41.91 percent in normal soil 45.28 and 36.3 percent in bio fertilizer added soil

Metagenomic Functional Potential Predicts Degradation Rates of a Model Organophosphorus Xenobiotic in Pesticide Contaminated Soils

Directory of Open Access Journals (Sweden)

Thomas C. Jeffries

2018-02-01

Full Text Available Chemical contamination of natural and agricultural habitats is an increasing global problem and a major threat to sustainability and human health. Organophosphorus (OP compounds are one major class of contaminant and can undergo microbial degradation, however, no studies have applied system-wide ecogenomic tools to investigate OP degradation or use metagenomics to understand the underlying mechanisms of biodegradation in situ and predict degradation potential. Thus, there is a lack of knowledge regarding the functional genes and genomic potential underpinning degradation and community responses to contamination. Here we address this knowledge gap by performing shotgun sequencing of community DNA from agricultural soils with a history of pesticide usage and profiling shifts in functional genes and microbial taxa abundance. Our results showed two distinct groups of soils defined by differing functional and taxonomic profiles. Degradation assays suggested that these groups corresponded to the organophosphorus degradation potential of soils, with the fastest degrading community being defined by increases in transport and nutrient cycling pathways and enzymes potentially involved in phosphorus metabolism. This was against a backdrop of taxonomic community shifts potentially related to contamination adaptation and reflecting the legacy of exposure. Overall our results highlight the value of using holistic system-wide metagenomic approaches as a tool to predict microbial degradation in the context of the ecology of contaminated habitats.

Human induced impacts on soil organic carbon in southwest Iceland

Science.gov (United States)

Gísladóttir, Guðrún; Erlendsson, Egill; Lal, Rattan

2013-04-01

The Icelandic environment has been strongly influenced by natural processes during the Holocene. Since settlement in AD 874, the introduction of grazing animals and other land use has drastically affected the natural environment. This includes the diminishing of vegetative cover, which has led to soil exposure and accelerated erosion over large areas, especially when in conjunction with harsh climate. This has specifically impacted processes and properties of volcanic soils (Andosols), which are subject to accelerated erosion by wind and water. While approximately 46% of the land surface in Iceland has sustained continuous vegetation cover, large areas have lost some or all of their soil cover formed during the postglacial era. Elsewhere, remaining soils have sparse or no vegetation cover, thus impairing soil carbon (C) sequestration. Among their multifunctional roles, soils support plant growth, increase soil biotic activity, enhance nutrient storage and strengthen the cycling of water and nutrients. In contrast, soil degradation by accelerated erosion and other processes impairs soil quality, reduces soil structure and depletes the soil organic matter (SOM) pool. Depletion of the SOM pool has also global implications because the terrestrial C pool is the third largest pool and strongly impacts the global C cycle. Erosional-depositional processes may deplete soil organic C (SOC) by erosion and increase by deposition. Some SOC-enriched sediments are redistributed over the landscape, while others are deposited in depression sites and transported into aquatic ecosystems. SOC decomposition processes are severely constrained in some environmental settings and any SOC buried under anaerobic conditions is protected against decomposition. Yet, the impact of the SOC transported by erosional processes and redistributed over the landscape is not fully understood because the variability in its turnover characteristics has not been widely studied. Thus, the fate of C

Degradation Capability of n-hexadecane Degrading Bacteria from Petroleum Contaminated Soils

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PENG Huai-li

2017-05-01

Full Text Available Samplings were performed in the petroleum contaminated soils of Dongying, Shandong Province of China. Degrading bacteria was isolated through enrichment in a Bushnel-Hass medium, with n-hexadecane as the sole source of carbon and energy. Then the isolated strains were identified by amplification of 16S rDNA gene and sequencing. The strain TZSX2 was selected as the powerful bacteria with stronger degradation ability, which was then identified as Rhodococcus hoagii genera based on the constructing results of the phylogenetic tree. The optimum temperature that allowed both high growth and efficient degradation ratio was in the scope of 28~36 ℃, and gas chromatography results showed that approximately more than 30% of n-hexadecane could be degraded in one week of incubation within the temperature range. Moreover, the strain TZSX2 was able to grow in high concentrations of n-hexadecane. The degradation rate reached 79% when the initial n-hexadecane concentration was 2 mL·L-1,while it still achieved 12% with n-hexadecane concentration of 20 mL·L-1. The optimal pH was 9 that allowed the highest growth and the greatest degradation rate of 91%. Above all, the screened strain TZSX2 showed high capabilities of alkali tolerance with excellent degradation efficiency for even high concentration of n-hexadecane, and thus it would be quite suitable for the remediation of petroleum contaminated soils especially in the extreme environment.

Evaluation of Bioaugmentation with Entrapped Degrading Cells as a Soil Remediation Technology

DEFF Research Database (Denmark)

Owsianiak, Mikolaj; Dechesne, Arnaud; Binning, Philip John

2010-01-01

Soil augmentation with microbial degraders immobilized on carriers is evaluated as a potential remediation technology using a mathematical model that includes degradation within spatially distributed carriers and diffusion or advectiondispersion as contaminant mass transfer mechanisms. The total...... degraders have low intrinsic degradation rates and that only limited carrier to soil volume ratios are practically feasible, bioaugmented soils are characterized by low effective degradation ratesandcanbeconsidered fully mixed. A simple exponential model is then sufficient to predict biodegradation...

Analytical tools for assessing land degradation and its impact on soil quality

Science.gov (United States)

Bindraban, P. S.; Mantel, S.; Bai, Z.; de Jong, R.

2010-05-01

Maintaining and enhancing the quality of land is of major importance to sustain future production capacity for food and other agriculture based products like fibers and wood, and for maintaining ecosystems services, including below and above ground biodiversity, provision of soil water and sequestration of carbon. Deterioration of this production base will be detrimental to the provision of the foreseen dramatic increase in human needs for goods and services. For this reason, land degradation, defined as a long-term loss in ecosystem function and productivity, has to be understood properly. Climate, soils, topography and socioeconomic activities are primary factors that can cause, by themselves or in combination, a number of temporary or permanent changes in the landscape, leading to degradation of vegetation and soils. For identifying intervention measures to prevent and revert trends of land deterioration, it is fundamental to know the extent of land degradation and to understand its impact on functional properties of land. To assess the global extent, (Bai et al. 2008) apply a remotely sensed vegetation index that describes the greenness of the vegetation cover as a proxy for biomass. Biomass production has been identified as a strong indicator for soil quality as it is an integral measure for soil, crop and environmental characteristics (Bindraban et al., 2000). Bai and colleagues observed that 24% of the global land has been degrading over the past 26 years - often in very productive areas. The relation with functional properties of land can be made through ecosystem models. Mantel et al. (1999; 2000) applied dynamic crop-soil models to calculate crop productivity at the national level. A baseline scenario that represents the current conditions and a scenario for 20 years of prolonged sheet erosion were modeled to calculate the productivity impact of topsoil erosion for wheat in Uruguay and for maize in Kenya. They concluded that topsoil erosion primarily

Degradation of 14C-glyphosate in compost amended soils.

Science.gov (United States)

Alexa, E; Bragea, M; Sumalan, R; Negrea, M; Lazureanu, A

2009-01-01

Glyphosate (N-phosphonomethyl-glycine), the active ingredient in several herbicide formulations, is a non-selective, post-emergent herbicide used in a variety of crop and non-crop situations. Glyphosate is a non-volatile herbicide that is relatively immobile in soil. Its degradation is due to microbiological processes and most laboratory studies have been conducted with 14C-glyphosate with the rate of 14CO2 evolution being used as an indication of herbicide breakdown. In this paper we have studied the glyphosate degradation in compost amendment soils using Scientilator Liquid TRIATHLER and Glyphosate-phosphonomethyl-14C-labeled with specific activity 2,2mCi/mmol. Four types of soils have been taken under study: Black Chernozem, Vertisol, Gleysol and Phaeozem with different characteristics. For the each type of soil have been realized four experimental variants (glyphosate blind sample with 1,5 ppm, concentration, autoclaved soil, soil with glyphosate and addition of compost in field concentration of 40 t/ha, respectively 60 t/ha. The mineralization curves of 14CO2 accumulated were compared during of 40 days. All the mineralization curves for the soils exhibited same patterns, with only two phases, the initial rapid phase of degradation, for about 20 days, attributed to microbial action on the free glyphosate and the second slow phase, when the curves attained plateaus. Compost applied with different concentrations to Vertisol and Black Chernozem did not appear to stimulate the microbial degradation of glyphosate. In Gleysol and Phaeozem with lower humus content, the mineralization curve of 14C indicate the increase degradation capacity, expressed as accumulated 14CO2 as % total 14C, with the increase of compost concentration.

Soil degradation in Pakistan

International Nuclear Information System (INIS)

Khan, M.R.

2005-01-01

This paper diagnoses the issues involved behind the current state, usage, interactions and linkages in the soils in Pakistan. The condition of soils is deteriorating due to developmental and environmental factors such as soil degradation, water pollution, fauna degeneration etc. Issues, problems and constraints faced in the management and usage of soils are diagnosed at different levels in the ecosystems predominant in Pakistan. The research questions propose effective solutions, types of instruments, methods or processes to resolve the issues within the various areas or ecosystems in the most sustainable and effective manner [23]. Biological solutions and methods can be applied at the sub-system level by private individuals or communities at a lower cost, and at a more localized level than engineering methods. Engineering methods may be suited for interventions at a system level rather than at a sub-system level; but even at this level they will be complementary with biological methods. (author)

Understanding and Enhancing Soil Biological Health: The Solution for Reversing Soil Degradation

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R. Michael Lehman

2015-01-01

Full Text Available Our objective is to provide an optimistic strategy for reversing soil degradation by increasing public and private research efforts to understand the role of soil biology, particularly microbiology, on the health of our world’s soils. We begin by defining soil quality/soil health (which we consider to be interchangeable terms, characterizing healthy soil resources, and relating the significance of soil health to agroecosystems and their functions. We examine how soil biology influences soil health and how biological properties and processes contribute to sustainability of agriculture and ecosystem services. We continue by examining what can be done to manipulate soil biology to: (i increase nutrient availability for production of high yielding, high quality crops; (ii protect crops from pests, pathogens, weeds; and (iii manage other factors limiting production, provision of ecosystem services, and resilience to stresses like droughts. Next we look to the future by asking what needs to be known about soil biology that is not currently recognized or fully understood and how these needs could be addressed using emerging research tools. We conclude, based on our perceptions of how new knowledge regarding soil biology will help make agriculture more sustainable and productive, by recommending research emphases that should receive first priority through enhanced public and private research in order to reverse the trajectory toward global soil degradation.

Degradation of phenanthrene and pyrene using genetically engineered dioxygenase producing Pseudomonas putida in soil

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Mardani Gashtasb

2016-01-01

Full Text Available Bioremediation use to promote degradation and/or removal of contaminants into nonhazardous or less-hazardous substances from the environment using microbial metabolic ability. Pseudomonas spp. is one of saprotrophic soil bacterium and can be used for biodegradation of polycyclic aromatic hydrocarbons (PAHs but this activity in most species is weak. Phenanthrene and pyrene could associate with a risk of human cancer development in exposed individuals. The aim of the present study was application of genetically engineered P. putida that produce dioxygenase for degradation of phenanthrene and pyrene in spiked soil using high-performance liquid chromatography (HPLC method. The nahH gene that encoded catechol 2,3-dioxygenase (C23O was cloned into pUC18 and pUC18-nahH recombinant vector was generated and transformed into wild P. putida, successfully. The genetically modified and wild types of P. putida were inoculated in soil and pilot plan was prepared. Finally, degradation of phenanthrene and pyrene by this bacterium in spiked soil were evaluated using HPLC measurement technique. The results were showed elimination of these PAH compounds in spiked soil by engineered P. putida comparing to dishes containing natural soil with normal microbial flora and inoculated autoclaved soil by wild type of P. putida were statistically significant (p0.05 but it was few impact on this process (more than 2%. Additional and verification tests including catalase, oxidase and PCR on isolated bacteria from spiked soil were indicated that engineered P. putida was alive and functional as well as it can affect on phenanthrene and pyrene degradation via nahH gene producing. These findings indicated that genetically engineered P. putida generated in this work via producing C23O enzyme can useful and practical for biodegradation of phenanthrene and pyrene as well as petroleum compounds in polluted environments.

Complex Adaptive Systems, soil degradation and land sensitivity to desertification: A multivariate assessment of Italian agro-forest landscape.

Science.gov (United States)

Salvati, Luca; Mavrakis, Anastasios; Colantoni, Andrea; Mancino, Giuseppe; Ferrara, Agostino

2015-07-15

Degradation of soils and sensitivity of land to desertification are intensified in last decades in the Mediterranean region producing heterogeneous spatial patterns determined by the interplay of factors such as climate, land-use changes, and human pressure. The present study hypothesizes that rising levels of soil degradation and land sensitivity to desertification are reflected into increasingly complex (and non-linear) relationships between environmental and socioeconomic variables. To verify this hypothesis, the Complex Adaptive Systems (CAS) framework was used to explore the spatiotemporal dynamics of eleven indicators derived from a standard assessment of soil degradation and land sensitivity to desertification in Italy. Indicators were made available on a detailed spatial scale (773 agricultural districts) for various years (1960, 1990, 2000 and 2010) and analyzed through a multi-dimensional exploratory data analysis. Our results indicate that the number of significant pair-wise correlations observed between indicators increased with the level of soil and land degradation, although with marked differences between northern and southern Italy. 'Fast' and 'slow' factors underlying soil and land degradation, and 'rapidly-evolving' or 'locked' agricultural districts were identified according to the rapidity of change estimated for each of the indicators studied. In southern Italy, 'rapidly-evolving' districts show a high level of soil degradation and land sensitivity to desertification during the whole period of investigation. On the contrary, those districts in northern Italy are those experiencing a moderate soil degradation and land sensitivity to desertification with the highest increase in the level of sensitivity over time. The study framework contributes to the assessment of complex local systems' dynamics in affluent but divided countries. Results may inform thematic strategies for the mitigation of land and soil degradation in the framework of action

Development of a composite soil degradation assessment index for cocoa agroecosystems in southwestern Nigeria

Science.gov (United States)

Adenrele Adeniyi, Sunday; de Clercq, Willem Petrus; van Niekerk, Adriaan

2017-08-01

Cocoa agroecosystems are a major land-use type in the tropical rainforest belt of West Africa, reportedly associated with several ecological changes, including soil degradation. This study aims to develop a composite soil degradation assessment index (CSDI) for determining the degradation level of cocoa soils under smallholder agroecosystems of southwestern Nigeria. Plots where natural forests have been converted to cocoa agroecosystems of ages 1-10, 11-40, and 41-80 years, respectively representing young cocoa plantations (YCPs), mature cocoa plantations (MCPs), and senescent cocoa plantations (SCPs), were identified to represent the biological cycle of the cocoa tree. Soil samples were collected at a depth of 0 to 20 cm in each plot and analysed in terms of their physical, chemical, and biological properties. Factor analysis of soil data revealed four major interacting soil degradation processes: decline in soil nutrients, loss of soil organic matter, increase in soil acidity, and the breakdown of soil textural characteristics over time. These processes were represented by eight soil properties (extractable zinc, silt, soil organic matter (SOM), cation exchange capacity (CEC), available phosphorus, total porosity, pH, and clay content). These soil properties were subjected to forward stepwise discriminant analysis (STEPDA), and the result showed that four soil properties (extractable zinc, cation exchange capacity, SOM, and clay content) are the most useful in separating the studied soils into YCP, MCP, and SCP. In this way, we have sufficiently eliminated redundancy in the final selection of soil degradation indicators. Based on these four soil parameters, a CSDI was developed and used to classify selected cocoa soils into three different classes of degradation. The results revealed that 65 % of the selected cocoa farms are moderately degraded, while 18 % have a high degradation status. The numerical value of the CSDI as an objective index of soil degradation

Longevity of terrestrial Carbon sinks: effects of soil degradation on greenhouse gas emissions

Science.gov (United States)

Kuhn, Nikolaus J.; Berger, Samuel; Kuonen, Samuel

2013-04-01

productivity associated with erosion. Areas with high erosion rates and already erosion-induced damages to soil productivity were considered to be closing or closed landscape carbon sinks. The final global assessment indicates that severe soil degradation in Africa, the Americas and Asia carries the risk of closing terrestrial Carbon sinks that currently contribute to an unintended mitigation of greenhouse gas emissions.

Novel Chryseobacterium sp. PYR2 degrades various organochlorine pesticides (OCPs) and achieves enhancing removal and complete degradation of DDT in highly contaminated soil.

Science.gov (United States)

Qu, Jie; Xu, Yang; Ai, Guo-Min; Liu, Ying; Liu, Zhi-Pei

2015-09-15

Long term residues of organochlorine pesticides (OCPs) in soils are of great concerning because they seriously threaten food security and human health. This article focuses on isolation of OCP-degrading strains and their performance in bioremediation of contaminated soil under ex situ conditions. A bacterium, Chryseobacterium sp. PYR2, capable of degrading various OCPs and utilizing them as a sole carbon and energy source for growth, was isolated from OCP-contaminated soil. In culture experiments, PYR2 degraded 80-98% of hexachlorocyclohexane (HCH) or 1,1,1-trichloro-2,2-bis (4-chlorophenyl) ethane (DDT) isomers (50 mg L(-1)) in 30 days. A pilot-scale ex situ bioremediation study of highly OCP-contaminated soil augmented with PYR2 was performed. During the 45-day experimental period, DDT concentration was reduced by 80.3% in PYR2-augmented soils (35.37 mg kg(-1) to 6.97 mg kg(-1)) but by only 57.6% in control soils. Seven DDT degradation intermediates (metabolites) were detected and identified in PYR2-augmented soils: five by GC/MS: 1,1-dichloro-2,2-bis (4-chlorophenyl) ethane (DDD), 1,1-dichloro-2,2-bis (4-chlorophenyl) ethylene (DDE), 1-chloro-2,2-bis (4-chlorophenyl) ethylene (DDMU), 1-chloro-2,2-bis (4-chlorophenyl) ethane (DDMS), and dichlorobenzophenone (DBP); and two by LC/MS: 4-chlorobenzoic acid (PCBA) and 4-chlorophenylacetic acid (PCPA). Levels of metabolites were fairly stable in control soils but varied greatly with time in PYR2-augmented soils. Levels of DDD, DDMU, and DDE in PYR2-augmented soils increased from day 0 to day 30 and then decreased by day 45. A DDT biodegradation pathway is proposed based on our identification of DDT metabolites in PYR2-augmented systems. PYR2 will be useful in future studies of OCP biodegradation and in bioremediation of OCP-contaminated soils. Copyright © 2015 Elsevier Ltd. All rights reserved.

Mobility and degradation of 14C-trifluralin in soil

International Nuclear Information System (INIS)

Zheng Lin; Wang Fujun

1993-01-01

Under laboratory condition, the adsorption, mobility and degradation of 14 C-trifluralin in soil were studied by using radioactive isotopic tracer. The results show that the adsorption of trifluralin in soil is quite strong. The rates of adsorption in soil are 73.89 ∼ 90.66%. The adsorption is significantly affected by the organic matter content of soil. It leaches rather low in Grassy-marsh land black soil containing plentiful organic matter and higher clay content, but quite higher in sand, and is more easily to move down. Under anaerobic condition, degradation of trifluralin in soil is faster. It is derogated by 60.2 ∼ 60.4% in soil extractive state within 30 days, and by 90.0 ∼ 94.7% within 60 days. Its main metabolites are the compounds with R f 0.06, 0.15 and 0.42 respectively

Enhanced degradation of metalaxyl in agricultural soils of São Paulo State, Brazil

Directory of Open Access Journals (Sweden)

Papini Solange

2001-01-01

Full Text Available This work investigated the effect of repeated applications on enhanced degradation of metalaxyl in two different agricultural soils used for cultivation of orange and lemon from Casa Branca and Itapetininga districts of São Paulo State, Brazil. Soil samples were collected from areas repeatedly treated with commercial ridomil 50GR for six successive years, and from other areas never exposed to this fungicide. At the laboratory, soil samples received a 14C-metalaxyl solution and its degradation was studied through radiometric techniques to measure biomineralization and recovery of extractable- and soil-bound products. Enhanced degradation was verified only in one soil, although partial degradation and mineralization of the fungicide were detected in both soils. The different rates and patterns of metalaxyl degradation in the soils were probably due to their different physical, chemical, and biological characteristics.

Soil degradation level under particular annual rainfall at Jenawi District– Karanganyar, Indonesia

Science.gov (United States)

Herawati, A.; Suntoro; Widijanto, H.; Pusponegoro, I.; Sutopo, N. R.; Mujiyo

2018-03-01

The study of the climatic elements such as rainfall is vital for the sustainable development of agriculture at a region. The aims of the study were to evaluate the soil degradation based on the annual rainfall and to determine the key factors which responsible for the soil degradation at in Jenawi Sub-District. The mapping of soil degradation potency is an identification of initial soil condition to discover the potential of the land degradation. The mapping was done by overlaying the map of soil, slope, rainfall and land use with the standard procedures to obtain the value and status of Soil Degradation Potency (SDP). The result showed that SDP in Jenawi District categorized in very low (SDP I) 0.00 ha (0.00%); low (SDP II) 109.01 ha (2.57%); moderate (SDP III) 1,935.92 ha (45.63%); high (SDP IV) 1,959.54 ha (46.19%) and very high (SDP V) 238.08 ha (5.61%). The rainfall is the factor which has the strong correlation with the SDP (r = 0.65, P local soil-land characteristics.

Effect of fertilizer and irradiation sterilization on the degradation of lindane in soil

International Nuclear Information System (INIS)

Bennaceur, M.; Ghezal, F.

1992-10-01

The effect of fertilizer and sterelization using irradiation were studied on the fate of lindane degradation in two soils under laboratory conditions. Degradation of lindane is higher in organic matter rich soil. Half life of product is respectively about one week and one month for both rich soil and poor soil. Fertilizer used decreases PH of soils and irradiation dose of 1 mrad seems to be insufficient to sterilize completely the soils. Ammonium nitrate stimulates slightly the degradations of lindane in soil (not sterilized) after two months

Constitutive and ligand-induced TCR degradation

DEFF Research Database (Denmark)

von Essen, Marina; Bonefeld, Charlotte Menné; Siersma, Volkert

2004-01-01

Modulation of TCR expression levels is a central event during T cell development and activation, and it probably plays an important role in adjusting T cell responsiveness. Conflicting data have been published on down-regulation and degradation rates of the individual TCR subunits, and several di...... to the lysosomes. Similar results were obtained in studies of primary human Vbeta8+ T cells stimulated with superantigen. Based on these results, the simplest model for TCR internalization, sorting, and degradation is proposed.......Modulation of TCR expression levels is a central event during T cell development and activation, and it probably plays an important role in adjusting T cell responsiveness. Conflicting data have been published on down-regulation and degradation rates of the individual TCR subunits, and several...... divergent models for TCR down-regulation and degradation have been suggested. The aims of this study were to determine the rate constants for constitutive and ligand-induced TCR degradation and to determine whether the TCR subunits segregate or are processed as an intact unit during TCR down...

Reclamation status of a degraded pasture based on soil health indicators.

OpenAIRE

SANTOS, C. A. dos; KRAWULSKI, C. C.; BINI, D.; GOULART FILHO, T.; KNOB, A.; MEDINA, C. C.; ANDRADE FILHO, G.; NOGUEIRA, M. A.

2015-01-01

Pasture degradation is a concern, especially in susceptible sandy soils for which strategies to recover them must be developed. Microbiological and biochemical soil health indicators are useful in the guindace of soil management practices and sustainable soil use. We assessed the success of threePanicum maximum Jacq. cultivars in the reclamation of a pasture in a sandy Typic Acrudox in the northwest of the state of Paraná, Brazil, based on soil health indicators. On a formerly degraded p...

Organic contaminants in soil : desorption kinetics and microbial degradation

NARCIS (Netherlands)

Schlebaum, W.

1999-01-01

The availability of organic contaminants in soils or sediments for microbial degradation or removal by physical means (e.g.) soil washing or soil venting) depends on the desorption kinetics of these contaminants from the soil matrix. When the organic contaminants desorb very slow from the

Assessing Soil Conservation Efficiency of Traditional Agricultural Practices by FRN Techniques: Example in the Highlands of Madagascar

International Nuclear Information System (INIS)

Rabesiranana, Naivo; Rasolonirina, Martin; Fanantenansoa Solonjara, Asivelo; Nomenjanahary Ravoson, Heritiana; Mabit, Lionel

2016-01-01

Soil degradation induced by human activity is a major concern in Madagascar. More than 30% of the island’s total soil area, covering 184 338 km 2 , is degraded. Moreover, soil erosion and sedimentation cause not only on-site degradation of agricultural fertile soils in Madagascar, but also off-site problems such as downstream sediment deposition in floodplains, water streams and reservoirs. Therefore, there is a clear need to acquire reliable data on the pattern and magnitude of soil redistribution under various agricultural practices to promote effective conservation strategies.

Soil Organic Carbon Fractions and Stocks Respond to Restoration Measures in Degraded Lands by Water Erosion

Science.gov (United States)

Nie, Xiaodong; Li, Zhongwu; Huang, Jinquan; Huang, Bin; Xiao, Haibing; Zeng, Guangming

2017-05-01

Assessing the degree to which degraded soils can be recovered is essential for evaluating the effects of adopted restoration measures. The objective of this study was to determine the restoration of soil organic carbon under the impact of terracing and reforestation. A small watershed with four typical restored plots (terracing and reforestation (four different local plants)) and two reference plots (slope land with natural forest (carbon-depleted) and abandoned depositional land (carbon-enriched)) in subtropical China was studied. The results showed that soil organic carbon, dissolved organic carbon and microbial biomass carbon concentrations in the surface soil (10 cm) of restored lands were close to that in abandoned depositional land and higher than that in natural forest land. There was no significant difference in soil organic carbon content among different topographic positions of the restored lands. Furthermore, the soil organic carbon stocks in the upper 60 cm soils of restored lands, which were varied between 50.08 and 62.21 Mg C ha-1, were higher than 45.90 Mg C ha-1 in natural forest land. Our results indicated that the terracing and reforestation could greatly increase carbon sequestration and accumulation and decrease carbon loss induced by water erosion. And the combination measures can accelerate the restoration of degraded soils when compared to natural forest only. Forest species almost have no impact on the total amount of soil organic carbon during restoration processes, but can significantly influence the activity and stability of soil organic carbon. Combination measures which can provide suitable topography and continuous soil organic carbon supply could be considered in treating degraded soils caused by water erosion.

Soil Organic Carbon Fractions and Stocks Respond to Restoration Measures in Degraded Lands by Water Erosion.

Science.gov (United States)

Nie, Xiaodong; Li, Zhongwu; Huang, Jinquan; Huang, Bin; Xiao, Haibing; Zeng, Guangming

2017-05-01

Assessing the degree to which degraded soils can be recovered is essential for evaluating the effects of adopted restoration measures. The objective of this study was to determine the restoration of soil organic carbon under the impact of terracing and reforestation. A small watershed with four typical restored plots (terracing and reforestation (four different local plants)) and two reference plots (slope land with natural forest (carbon-depleted) and abandoned depositional land (carbon-enriched)) in subtropical China was studied. The results showed that soil organic carbon, dissolved organic carbon and microbial biomass carbon concentrations in the surface soil (10 cm) of restored lands were close to that in abandoned depositional land and higher than that in natural forest land. There was no significant difference in soil organic carbon content among different topographic positions of the restored lands. Furthermore, the soil organic carbon stocks in the upper 60 cm soils of restored lands, which were varied between 50.08 and 62.21 Mg C ha -1 , were higher than 45.90 Mg C ha -1 in natural forest land. Our results indicated that the terracing and reforestation could greatly increase carbon sequestration and accumulation and decrease carbon loss induced by water erosion. And the combination measures can accelerate the restoration of degraded soils when compared to natural forest only. Forest species almost have no impact on the total amount of soil organic carbon during restoration processes, but can significantly influence the activity and stability of soil organic carbon. Combination measures which can provide suitable topography and continuous soil organic carbon supply could be considered in treating degraded soils caused by water erosion.

Adsorption and degradation of five selected antibiotics in agricultural soil.

Science.gov (United States)

Pan, Min; Chu, L M

2016-03-01

Large quantities of antibiotics are being added to agricultural fields worldwide through the application of wastewater, manures and biosolids, resulting in antibiotic contamination and elevated environmental risks in terrestrial environments. Most studies on the environmental fate of antibiotics focus on aquatic environments or wastewater treatment plants. Little is known about the behavior of antibiotics at environmentally relevant concentrations in agricultural soil. In this study we evaluated the adsorption and degradation of five different antibiotics (tetracycline, sulfamethazine, norfloxacin, erythromycin, and chloramphenicol) in sterilized and non-sterilized agricultural soils under aerobic and anaerobic conditions. Adsorption was highest for tetracycline (Kd, 1093 L/kg), while that for sulfamethazine was negligible (Kd, 1.365 L/kg). All five antibiotics were susceptible to microbial degradation under aerobic conditions, with half-lives ranging from 2.9 to 43.3 d in non-sterilized soil and 40.8 to 86.6 d in sterilized soil. Degradation occurred at a higher rate under aerobic conditions but was relatively persistent under anaerobic conditions. For all the antibiotics, a higher initial concentration was found to slow down degradation and prolong persistence in soil. The degradation behavior of the antibiotics varied in relation to their physicochemical properties as well as the microbial activities and aeration of the recipient soil. The poor adsorption and relative persistence of sulfamethazine under both aerobic and anaerobic conditions suggest that it may pose a higher risk to groundwater quality. An equation was proposed to predict the fate of antibiotics in soil under different field conditions, and assess their risks to the environment. Copyright © 2015 Elsevier B.V. All rights reserved.

Targeting Neutrophil Protease-Mediated Degradation of Tsp-1 to Induce Metastatic Dormancy

Science.gov (United States)

2017-10-01

AWARD NUMBER: W81XWH-16-1-0615 TITLE: Targeting Neutrophil Protease-Mediated Degradation of Tsp-1 to Induce Metastatic Dormancy PRINCIPAL...29 Sep 2017 4. TITLE AND SUBTITLE 5a. CONTRACT NUMBER Targeting Neutrophil Protease-Mediated Degradation of Tsp-1 to Induce Metastatic Dormancy...infection or cigarette smoke enhanced pulmonary metastasis from breast cancer in humans and mice. Similarly, autoimmune arthritis, characterized by

A review of the impacts of degradation threats on soil properties in the UK.

Science.gov (United States)

Gregory, A S; Ritz, K; McGrath, S P; Quinton, J N; Goulding, K W T; Jones, R J A; Harris, J A; Bol, R; Wallace, P; Pilgrim, E S; Whitmore, A P

2015-10-01

National governments are becoming increasingly aware of the importance of their soil resources and are shaping strategies accordingly. Implicit in any such strategy is that degradation threats and their potential effect on important soil properties and functions are defined and understood. In this paper, we aimed to review the principal degradation threats on important soil properties in the UK, seeking quantitative data where possible. Soil erosion results in the removal of important topsoil and, with it, nutrients, C and porosity. A decline in soil organic matter principally affects soil biological and microbiological properties, but also impacts on soil physical properties because of the link with soil structure. Soil contamination affects soil chemical properties, affecting nutrient availability and degrading microbial properties, whilst soil compaction degrades the soil pore network. Soil sealing removes the link between the soil and most of the 'spheres', significantly affecting hydrological and microbial functions, and soils on re-developed brownfield sites are typically degraded in most soil properties. Having synthesized the literature on the impact on soil properties, we discuss potential subsequent impacts on the important soil functions, including food and fibre production, storage of water and C, support for biodiversity, and protection of cultural and archaeological heritage. Looking forward, we suggest a twin approach of field-based monitoring supported by controlled laboratory experimentation to improve our mechanistic understanding of soils. This would enable us to better predict future impacts of degradation processes, including climate change, on soil properties and functions so that we may manage soil resources sustainably.

MAPPING OF SOIL DEGRADATION POTENCY IN PADDY FIELD WONOGIRI, INDONESIA

Directory of Open Access Journals (Sweden)

Mujiyo

2016-06-01

Full Text Available Sustainability of paddy field becomes the main concern as the media of biomass production, thus it is needed a datum and information about land characteristics to find out its degradation. Mapping of soil degradation potency in paddy field is an identification of initial soil condition to discover the land degradation potency. Mapping was done by overlaying map of soil, slope, rainfall and land use with standard procedures to obtain its value and status of soil degradation potency. Area mapping is an effective land for biomass production (natural forest, mixed farm, savanna, paddy field, shrub and dry field with approximately 43,291.00 hectares (ha in Sidoharjo, Girimarto, Jatipurno, Jatisrono, Jatiroto, Tirtomoyo, Nguntoronadi and Ngadirojo District. The result shows that soil degradation potency (SDP in Districts of Sidoharjo, Girimarto, Jatipurno, Jatisrono, Jatiroto, Tirtomoyo, Nguntoronadi and Ngadirojo are very low, low (DP II 20,702.47 ha (47.82%, moderate (DP III 15,823.80 ha (36,55% and high (DP IV 6,764.73 ha (15.63%. Paddy field covered 22,036.26 ha or about 50.90% of all area as effective biomass production, its SDP considers as low (DP II 16,021.04 ha (37.01% and moderate (DP III 6,015.22 ha (13,89%. Paddy field has a low SDP because it is commonly lies on flat area and conservation method by the farmer is maintaining the paddy bund and terrace. This study needs an advanced study to identify actual SDP through detail verification in the field, and also support by soil sample analysis in the laboratory.

Land degradation in the Canyoles river watershed, Eastern Spain

Science.gov (United States)

Cerdà, A.; Gonzalez Peñaloza, F. A.; Imeson, A. C.; Gimenez Morera, A.

2012-04-01

Human induced Land Degradation by actions that have a negative impact on the functioning of the environment (Imeson, 2012). Mediterranean arid lands have been intensely transformed by human activity through history, especially due to agricultural management. This intense use of the land resulted in a new man made landscape that is evolving as a consequence of the global change to a new situation that can trigger Land Degradation processes. Extensive areas of olive groves, fruit orchards and vineyards, many of them grown on marginal areas (e.g., terraced slopes) as well as non-sustainable land uses have induced different environmental problems in the Canyoles river watershed (Eastern Spain). The human and physical changes suffered by this region are being used as a representative area of the western Mediterranean basin to monitor how the responses to the Desertification and Land Degradation fit. The aim of this research is to evaluate socio-ecological systems as a part of the Land Ecosystem and Degradation Desertification Response Assessment (LEDDRA) project. This presentation will show the main Land Degradation processes that has been identified: [1] soil erosion as a consequence of agriculture, [2] soil compaction due to herbicide and heavy machinery use, [3] soil sealing on croplands due to heavy vehicles and asphalt and concrete application on roads, [4] soil/water pollution due to agrochemicals, [5] reduction of biodiversity in croplands due to herbicides and substitution of the traditional irrigation system, [6] urbanization processes of rural areas due to the development of urban areas and agricultural infrastructures, [7] monoculture of citrus plantations in the lower part of the watershed, [8] roads and railway construction, [9] aquifer depletion, [10] abandonment of industrial activities, [11] abandonment of local traditional practices for food production and other resources and [12] the effect of land abandonment and wildfires in the nearby mountainous

Obatoclax, a Pan-BCL-2 Inhibitor, Targets Cyclin D1 for Degradation to Induce Antiproliferation in Human Colorectal Carcinoma Cells.

Science.gov (United States)

Or, Chi-Hung R; Chang, Yachu; Lin, Wei-Cheng; Lee, Wee-Chyan; Su, Hong-Lin; Cheung, Muk-Wing; Huang, Chang-Po; Ho, Cheesang; Chang, Chia-Che

2016-12-27

Colorectal cancer is the third most common cancer worldwide. Aberrant overexpression of antiapoptotic BCL-2 (B-cell lymphoma 2) family proteins is closely linked to tumorigenesis and poor prognosis in colorectal cancer. Obatoclax is an inhibitor targeting all antiapoptotic BCL-2 proteins. A previous study has described the antiproliferative action of obatoclax in one human colorectal cancer cell line without elucidating the underlying mechanisms. We herein reported that, in a panel of human colorectal cancer cell lines, obatoclax inhibits cell proliferation, suppresses clonogenicity, and induces G₁-phase cell cycle arrest, along with cyclin D1 downregulation. Notably, ectopic cyclin D1 overexpression abrogated clonogenicity suppression but also G₁-phase arrest elicited by obatoclax. Mechanistically, pre-treatment with the proteasome inhibitor MG-132 restored cyclin D1 levels in all obatoclax-treated cell lines. Cycloheximide chase analyses further revealed an evident reduction in the half-life of cyclin D1 protein by obatoclax, confirming that obatoclax downregulates cyclin D1 through induction of cyclin D1 proteasomal degradation. Lastly, threonine 286 phosphorylation of cyclin D1, which is essential for initiating cyclin D1 proteasomal degradation, was induced by obatoclax in one cell line but not others. Collectively, we reveal a novel anticancer mechanism of obatoclax by validating that obatoclax targets cyclin D1 for proteasomal degradation to downregulate cyclin D1 for inducing antiproliferation.

Evaluation of the potential of pentachlorophenol degradation in soil by pulsed corona discharge plasma from soil characteristics.

Science.gov (United States)

Wang, Tie Cheng; Lu, Na; Li, Jie; Wu, Yan

2010-04-15

Chlorinated organics are frequently found as harmful soil contaminants and persisted for extended periods of time. A novel approach, named pulsed corona discharge plasma (PCDP), was employed for the degradation of pentachlorophenol (PCP) in soil. Experimental results showed that 87% of PCP could be smoothly removed in 60 min. Increasing pulse voltage, enhancing soil pH, lowering humic acid (HA) in soil and reducing granular size of the soil were found to be favorable for PCP degradation efficiency. Oxidation and physical processes simultaneously contributed to PCP removal in soil and ozone was the main factor in PCDP treatment. C-Cl bonds in PCP were cleaved during PCDP treatment by Fourier transform infrared spectroscopy (FTIR) analysis. The mineralization of PCP was confirmed by total organic carbon (TOC) and dechlorination analyses. The main intermediate products such as tetrachlorocatechol, tetrachlorohydroquinone, acetic acid, formic acid, and oxalic acid were identified by HPLC/MS and ion chromatography. A possible pathway of PCP degradation in soil in such a system was proposed.

Heavy metals in a degraded soil treated with sludge from water treatment plant

Directory of Open Access Journals (Sweden)

Teixeira Sandra Tereza

2005-01-01

Full Text Available The application of water treatment sludge (WTS to degraded soil is an alternative for both residue disposal and degraded soil reclaim. This study evaluated effects of the application of water treatment sludge to a Typic Hapludox soil degraded by tin mining in the National Forest of Jamari, State of Rondonia, Brazil, on the content of heavy metals. A completely randomized experimental design with five treatments was used: control (n = 4; chemical control, which received only liming (n = 4; and rates D100, D150 and D200, which corresponded to 100, 150 and 200 mg of N-sludge kg-1 soil (n = 20, respectively. Thirty days after liming, period in which soil moisture was kept at 70% of the retention capacity, soil samples were taken and analyzed for total and extractable Fe, Cu, Mn, Zn, Cd, Pb, Ni, and Cr. The application of WTS increased heavy-metal contents in the degraded soil. Although heavy metals were below their respective critical limits, sludge application onto degraded areas may cause hazardous environmental impact and thus must be monitored.

Identification of soil bacteria able to degrade phenanthrene bound to a hydrophobic sorbent in situ

Energy Technology Data Exchange (ETDEWEB)

Regonne, Raïssa Kom [CEA, DSV/iRTSV, Chimie et Biologie des Métaux, 38054, Grenoble cedex 9 (France); Univ. Grenoble Alpes and CNRS, UMR 5249, 38042, Grenoble (France); Laboratoire de Substances Actives et Pollution, ENSAI, Université de Ngaoundéré, BP 455, Ngaoundéré (Cameroon); Martin, Florence [CEA, DSV/iRTSV, Chimie et Biologie des Métaux, 38054, Grenoble cedex 9 (France); Univ. Grenoble Alpes and CNRS, UMR 5249, 38042, Grenoble (France); Mbawala, Augustin [Laboratoire de Microbiologie, ENSAI, Université de Ngaoundéré, BP 455, Ngaoundéré (Cameroon); Ngassoum, Martin Benoît [Laboratoire de Substances Actives et Pollution, ENSAI, Université de Ngaoundéré, BP 455, Ngaoundéré (Cameroon); Jouanneau, Yves [CEA, DSV/iRTSV, Chimie et Biologie des Métaux, 38054, Grenoble cedex 9 (France); Univ. Grenoble Alpes and CNRS, UMR 5249, 38042, Grenoble (France)

2013-09-15

Efficient bioremediation of PAH-contaminated sites is limited by the hydrophobic character and poor bioavailability of pollutants. In this study, stable isotope probing (SIP) was implemented to track bacteria that can degrade PAHs adsorbed on hydrophobic sorbents. Temperate and tropical soils were incubated with {sup 13}C-labeled phenanthrene, supplied by spiking or coated onto membranes. Phenanthrene mineralization was faster in microcosms with PAH-coated membranes than in microcosms containing spiked soil. Upon incubation with temperate soil, phenanthrene degraders found in the biofilms that formed on coated membranes were mainly identified as Sphingomonadaceae and Actinobacteria. In the tropical soil, uncultured Rhodocyclaceae dominated degraders bound to membranes. Accordingly, ring-hydroxylating dioxygenase sequences recovered from this soil matched PAH-specific dioxygenase genes recently found in Rhodocyclaceae. Hence, our SIP approach allowed the detection of novel degraders, mostly uncultured, which differ from those detected after soil spiking, but might play a key role in the bioremediation of PAH-polluted soils. -- Highlights: •Soil bacteria with the ability to degrade sorbent-bound PAHs were investigated. •In soil, membrane-bound phenanthrene was readily mineralized. •PAH degraders found in biofilms were different in temperate and tropical soils. •Uncultured Rhodocyclaceae were dominant phenanthrene degraders in the tropical soil. •PAH-specific ring-hydroxylating dioxygenase sequences were identified in soil DNA. -- Bacteria able to degrade PAHs bound to a hydrophobic sorbent were mainly identified as uncultured Rhodocyclaceae and Sphingomonadaceae in polluted soils from tropical and temperate area, respectively.

Identification of soil bacteria able to degrade phenanthrene bound to a hydrophobic sorbent in situ

International Nuclear Information System (INIS)

Regonne, Raïssa Kom; Martin, Florence; Mbawala, Augustin; Ngassoum, Martin Benoît; Jouanneau, Yves

2013-01-01

Efficient bioremediation of PAH-contaminated sites is limited by the hydrophobic character and poor bioavailability of pollutants. In this study, stable isotope probing (SIP) was implemented to track bacteria that can degrade PAHs adsorbed on hydrophobic sorbents. Temperate and tropical soils were incubated with 13 C-labeled phenanthrene, supplied by spiking or coated onto membranes. Phenanthrene mineralization was faster in microcosms with PAH-coated membranes than in microcosms containing spiked soil. Upon incubation with temperate soil, phenanthrene degraders found in the biofilms that formed on coated membranes were mainly identified as Sphingomonadaceae and Actinobacteria. In the tropical soil, uncultured Rhodocyclaceae dominated degraders bound to membranes. Accordingly, ring-hydroxylating dioxygenase sequences recovered from this soil matched PAH-specific dioxygenase genes recently found in Rhodocyclaceae. Hence, our SIP approach allowed the detection of novel degraders, mostly uncultured, which differ from those detected after soil spiking, but might play a key role in the bioremediation of PAH-polluted soils. -- Highlights: •Soil bacteria with the ability to degrade sorbent-bound PAHs were investigated. •In soil, membrane-bound phenanthrene was readily mineralized. •PAH degraders found in biofilms were different in temperate and tropical soils. •Uncultured Rhodocyclaceae were dominant phenanthrene degraders in the tropical soil. •PAH-specific ring-hydroxylating dioxygenase sequences were identified in soil DNA. -- Bacteria able to degrade PAHs bound to a hydrophobic sorbent were mainly identified as uncultured Rhodocyclaceae and Sphingomonadaceae in polluted soils from tropical and temperate area, respectively

Degradation and adsorption of tralkoxydim in Chinese soils and water-sediment environments.

Science.gov (United States)

Wu, Wen Zhu; Shan, Zheng Jun; Kong, De Yang; He, Jian

2017-06-01

Tralkoxydim is a cyclohexanedione herbicide primarily used for gramineous weed control in China. In this paper, we present results of a tralkoxydim laboratory environmental fate study characterizing its degradation, adsorption, and mobility behavior in three different soils and two water-sediment systems (river and lake) in China. Degradation half-life of tralkoxydim in soil under aerobic conditions was 5.1, 7.7, and 7.9 days in Jiangxi red soil, Taihu paddy soil, and Northeast China black soil, respectively. Under anaerobic and flooding conditions, half-life values were 6.2, 15.1, and 19.8 days for the same three soils, respectively. Soil pH was the major factor effecting tralkoxydim degradation. In the aerobic water-sediment experiments, tralkoxydim degraded faster in the river system (total system half-life 43.3 days) than the lake system (total system half-life 99.0 days). Correspondingly, its anaerobic degradation half-life values were 46.2 and 53.3 days for the river and lake systems, respectively. Tralkoxydim adsorption in the three soils was found to follow the empirical Freundlich isotherm. The adsorption coefficient (K d ) was 8.60, 1.00, and 1.57 for Jiangxi red soil, Taihu paddy soil, and Northeast China black soil, respectively. Soil pH was the major factor effecting tralkoxydim adsorption. Adsorption free energy change was less than 40 kJ mol -1 in all three soils, indicating a physical mechanism in the process. Thin-layer chromatography (TLC) tests showed that relative to the solvent transport to 11.5 cm, the travel distance of tralkoxydim was 8-10 cm in the three soils, corresponding Rf values at 0.05, 0.35, and 0.75 for Jiangxi red soil, Taihu paddy soil, and Northeast China black soil, respectively. Results of this work suggest that under alkaline conditions, tralkoxydim adsorption becomes smaller; thus, assessments on its mobility and potential groundwater impact should focus on these soil types.

BioDegradation of Refined Petroleum Hydrocarbons in Soil | Obire ...

African Journals Online (AJOL)

Carbon-dioxide production and hydrocarbon degradation of refined petroleum hydrocarbon in soils treated with 5% gasoline, kerosene and diesel oil were investigated. Soil for study was bulked from around a car park in Port Harcourt. Soil samples were collected at weekly intervals for four weeks and subsequently at ...

A method to detect soil carbon degradation during soil erosion

OpenAIRE

F. Conen; M. Schaub; C. Alewell

2009-01-01

Soil erosion has been discussed intensively but controversial both as a significant source or a significant sink of atmospheric carbon possibly explaining the gap in the global carbon budget. One of the major points of discussion has been whether or not carbon is degraded and mineralized to CO₂ during detachment, transport and deposition of soil material. By combining the caesium-137 (¹³⁷Cs) approach (quantification of erosion rates) with stable c...

Characterization of acetanilide herbicides degrading bacteria isolated from tea garden soil.

Science.gov (United States)

Wang, Yei-Shung; Liu, Jian-Chang; Chen, Wen-Ching; Yen, Jui-Hung

2008-04-01

Three different green manures were added to the tea garden soils separately and incubated for 40 days. After, incubation, acetanilide herbicides alachlor and metolachlor were spiked into the soils, separately, followed by the isolation of bacteria in each soil at designed intervals. Several bacterial strains were isolated from the soils and identified as Bacillus silvestris, B. niacini, B. pseudomycoides, B. cereus, B. thuringiensis, B. simplex, B. megaterium, and two other Bacillus sp. (Met1 and Met2). Three unique strains with different morphologies were chosen for further investigation. They were B. megaterium, B. niacini, and B. silvestris. The isolated herbicide-degrading bacteria showed optimal performance among three incubation temperatures of 30 degrees C and the best activity in the 10 to 50 microg/ml concentration of the herbicide. Each bacterial strain was able to degrade more than one kind of test herbicides. After incubation for 119 days, B. cereus showed the highest activity to degrade alachlor and propachlor, and B. thuringiensis to degrade metolachlor.

Nicotine induces mitochondrial fission through mitofusin degradation in human multipotent embryonic carcinoma cells

Energy Technology Data Exchange (ETDEWEB)

Hirata, Naoya; Yamada, Shigeru [Division of Pharmacology, National Institute of Health Sciences (Japan); Asanagi, Miki [Division of Pharmacology, National Institute of Health Sciences (Japan); Faculty of Engineering, Department of Materials Science and Engineering, Yokohama National University (Japan); Sekino, Yuko [Division of Pharmacology, National Institute of Health Sciences (Japan); Kanda, Yasunari, E-mail: kanda@nihs.go.jp [Division of Pharmacology, National Institute of Health Sciences (Japan)

2016-02-05

Nicotine is considered to contribute to the health risks associated with cigarette smoking. Nicotine exerts its cellular functions by acting on nicotinic acetylcholine receptors (nAChRs), and adversely affects normal embryonic development. However, nicotine toxicity has not been elucidated in human embryonic stage. In the present study, we examined the cytotoxic effects of nicotine in human multipotent embryonal carcinoma cell line NT2/D1. We found that exposure to 10 μM nicotine decreased intracellular ATP levels and inhibited proliferation of NT2/D1 cells. Because nicotine suppressed energy production, which is a critical mitochondrial function, we further assessed the effects of nicotine on mitochondrial dynamics. Staining with MitoTracker revealed that 10 μM nicotine induced mitochondrial fragmentation. The levels of the mitochondrial fusion proteins, mitofusins 1 and 2, were also reduced in cells exposed to nicotine. These nicotine effects were blocked by treatment with mecamylamine, a nonselective nAChR antagonist. These data suggest that nicotine degrades mitofusin in NT2/D1 cells and thus induces mitochondrial dysfunction and cell growth inhibition in a nAChR-dependent manner. Thus, mitochondrial function in embryonic cells could be used to assess the developmental toxicity of chemicals.

Nicotine induces mitochondrial fission through mitofusin degradation in human multipotent embryonic carcinoma cells

International Nuclear Information System (INIS)

Hirata, Naoya; Yamada, Shigeru; Asanagi, Miki; Sekino, Yuko; Kanda, Yasunari

2016-01-01

Nicotine is considered to contribute to the health risks associated with cigarette smoking. Nicotine exerts its cellular functions by acting on nicotinic acetylcholine receptors (nAChRs), and adversely affects normal embryonic development. However, nicotine toxicity has not been elucidated in human embryonic stage. In the present study, we examined the cytotoxic effects of nicotine in human multipotent embryonal carcinoma cell line NT2/D1. We found that exposure to 10 μM nicotine decreased intracellular ATP levels and inhibited proliferation of NT2/D1 cells. Because nicotine suppressed energy production, which is a critical mitochondrial function, we further assessed the effects of nicotine on mitochondrial dynamics. Staining with MitoTracker revealed that 10 μM nicotine induced mitochondrial fragmentation. The levels of the mitochondrial fusion proteins, mitofusins 1 and 2, were also reduced in cells exposed to nicotine. These nicotine effects were blocked by treatment with mecamylamine, a nonselective nAChR antagonist. These data suggest that nicotine degrades mitofusin in NT2/D1 cells and thus induces mitochondrial dysfunction and cell growth inhibition in a nAChR-dependent manner. Thus, mitochondrial function in embryonic cells could be used to assess the developmental toxicity of chemicals.

Methane oxidation and degradation of organic compounds in landfill soil covers

DEFF Research Database (Denmark)

Scheutz, Charlotte; Kjeldsen, Peter

2002-01-01

High rates of methane oxidation and degradation of the lowed halogenated methanes (TCM and DCM) and HCFCs (HCFC-21 and HCFC-22) were found in an investigation of the oxidation of methane and halogenated organic compunds (HOCs) in landfill gas affected soil. The degradation followed zero-order kin......High rates of methane oxidation and degradation of the lowed halogenated methanes (TCM and DCM) and HCFCs (HCFC-21 and HCFC-22) were found in an investigation of the oxidation of methane and halogenated organic compunds (HOCs) in landfill gas affected soil. The degradation followed zero...

Carbon degradation in agricultural soils flooded with seawater after managed coastal realignment

Science.gov (United States)

Sjøgaard, Kamilla S.; Treusch, Alexander H.; Valdemarsen, Thomas B.

2017-09-01

Permanent flooding of low-lying coastal areas is a growing threat due to climate change and related sea-level rise. An increasingly common solution to protect coastal areas lying below sea level is intentional flooding by "managed coastal realignment". However, the biogeochemical implications of flooding agricultural soils with seawater are still not well understood. We conducted a 1-year mesocosm experiment to investigate microbial carbon degradation processes in soils flooded with seawater. Agricultural soils were sampled on the northern coast of the island Fyn (Denmark) at Gyldensteen Strand, an area that was subsequently flooded in a coastal realignment project. We found rapid carbon degradation to TCO2 1 day after experimental flooding and onwards and microbial sulfate reduction established quickly as an important mineralization pathway. Nevertheless, no free sulfide was observed as it precipitated as Fe-S compounds with Fe acting as a natural buffer, preventing toxic effects of free sulfide in soils flooded with seawater. Organic carbon degradation decreased significantly after 6 months, indicating that most of the soil organic carbon was refractory towards microbial degradation under the anoxic conditions created in the soil after flooding. During the experiment only 6-7 % of the initial soil organic carbon pools were degraded. On this basis we suggest that most of the organic carbon present in coastal soils exposed to flooding through sea-level rise or managed coastal realignment will be permanently preserved.

A laboratory examination of organic matter degradation in a B horizon soil from post-mining reconstructed prime farmland soil

International Nuclear Information System (INIS)

Felton, G.K.; Taraba, J.L.

1994-01-01

A laboratory study was conducted to assess the effect of reclamation treatment on the aerobic degradation rate of organic matter composed of horse faeces, urine, and straw bedding. It was hypothesized that different physical treatments of soil removed during the mining process would alter the rate of organic matter decomposition. The soils were from the B horizon of reclaimed prime farmland. The B horizon was reconstructed using one of two treatments: soil direct hauled from the mining site to the reconstruction site; soil hauled from a 6-month-old stockpile. The soil that was immediately replaced exhibited organic matter degradation rates similar to a control whereas the stockpiled soil organic matter degradation rates were depressed. This implies that stockpiling adversely affects the microbial population. Prescription limiting, typically done during reclamation, did have the desired effect on pH and did not interfere with organic matter degradation. 15 refs., 1 fig., 4 tabs

Microbial functional diversity plays an important role in the degradation of polyhydroxybutyrate (PHB) in soil.

Science.gov (United States)

Dey, Samrat; Tribedi, Prosun

2018-03-01

Towards bioremediation of recalcitrant materials like synthetic polymer, soil has been recognized as a traditional site for disposal and subsequent degradation as some microorganisms in soil can degrade the polymer in a non-toxic, cost-effective, and environment friendly way. Microbial functional diversity is a constituent of biodiversity that includes wide range of metabolic activities that can influence numerous aspects of ecosystem functioning like ecosystem stability, nutrient availability, ecosystem dynamics, etc. Thus, in the current study, we assumed that microbial functional diversity could play an important role in polymer degradation in soil. To verify this hypothesis, we isolated soil from five different sites of landfill and examined several microbiological parameters wherein we observed a significant variation in heterotrophic microbial count as well as microbial activities among the soil microcosms tested. Multivariate analysis (principle component analysis) based on the carbon sources utilization pattern revealed that soil microcosms showed different metabolic patterns suggesting the variable distribution of microorganisms among the soil microcosms tested. Since microbial functional diversity depends on both microbial richness and evenness, Shannon diversity index was determined to measure microbial richness and Gini coefficient was determined to measure microbial evenness. The tested soil microcosms exhibited variation in both microbial richness and evenness suggesting the considerable difference in microbial functional diversity among the tested microcosms. We then measured polyhydroxybutyrate (PHB) degradation in soil microcosms after desired period of incubation of PHB in soil wherein we found that soil microcosms having higher functional diversity showed enhanced PHB degradation and soil microcosms having lower functional diversity showed reduced PHB degradation. We also noticed that all the tested soil microcosms showed similar pattern in both

Reclamation status of a degraded pasture based on soil health indicators

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Cristiane Alcantara dos Santos

2015-06-01

Full Text Available Pasture degradation is a concern, especially in susceptible sandy soils for which strategies to recover them must be developed. Microbiological and biochemical soil health indicators are useful in the guindace of soil management practices and sustainable soil use. We assessed the success of threePanicum maximum Jacq. cultivars in the reclamation of a pasture in a sandy Typic Acrudox in the northwest of the state of Paraná, Brazil, based on soil health indicators. On a formerly degraded pasture withUrochloa brizantha (Hochst. ex A. Rich. R.D. Webster, a trial with threeP. maximum (cv. Massai, Tanzânia, or Mombaça was conducted. Lime and phosphate were applied at set-up, and mineral N and K as topdressing. A remnant of degraded pasture adjacent to the trial was used as control. Twenty-three chemical, physical, microbiological and biochemical attributes were assessed for the 0-10 cm topsoil. The procedures for reclamation improved most of the indicators of soil health in relation to the degraded pasture, such as soil P, mineral N, microbial biomass C, ammonification rate, dehydrogenase activity and acid phosphatase. CO2 evolution decreased, whereas microbial biomass C increased in the pasture under reclamation, resulting in a lower metabolic quotient (qCO2 that points to a decrease in metabolic stress of the microbial community. The reclamation of the pasture withP. maximum, especially cv. Mombaça, were evidenced by improvements in the microbiological and biochemical soil health indicators, showing a recovery of processes related to C, N and P cycling in the soil.

Physical soil degradation in the Netherlands

NARCIS (Netherlands)

Boels, D.; Havinga, L.

1980-01-01

Soils used in agriculture are subjected to a wide variety of human activities. Soil tillage and soil impravement operations may loose the soil, while soil wetting due to rainfall, and farming operations as sowing, spraying, weed control and harvesting but also grazing cattle may compact the soil.

Degradation of [14C]isofenphos in soil in the laboratory under different soil pH's, temperatures, and moistures

International Nuclear Information System (INIS)

Abou-Assaf, N.; Coats, J.R.

1987-01-01

The effects of three soil pH's, three soil temperatures, and three soil moistures on [ 14 C]isofenphos degradation were investigated. All three factors interacted strongly and significantly affected the persistence of isofenphos as well as the formation of the degradation products (p less than 1%). Isofenphos degradation was greatest at the higher temperatures 35 0 C greater than 25 0 C greater than 15 0 C (except under alkaline pH's), medium moisture 25% greater than 30% greater than 15%, and in both alkaline (pH = 8) and acidic soils (pH = 6) compared with neutral soil (pH = 7). Isofenphos oxon formation was greatest at higher temperatures 35 0 C compared with 25 0 C and 15 0 C, in acidic soil greater than neutral soil greater than alkaline soil, and under high moisture (30%) compared with the 15% and 22.5% moistures. The formation of soil-bound residues was greatest at higher temperatures 35 0 C greater than 25 0 C greater than 15 0 C, higher moisture 30% compared with 15% and 22.5%, and in alkaline soil compared with neutral and acidic soils

Comparative metagenomic analysis of PAH degradation in soil by a mixed microbial consortium.

Science.gov (United States)

Zafra, German; Taylor, Todd D; Absalón, Angel E; Cortés-Espinosa, Diana V

2016-11-15

In this study, we used a taxonomic and functional metagenomic approach to analyze some of the effects (e.g. displacement, permanence, disappearance) produced between native microbiota and a previously constructed Polycyclic Aromatic Hydrocarbon (PAH)-degrading microbial consortium during the bioremediation process of a soil polluted with PAHs. Bioaugmentation with a fungal-bacterial consortium and biostimulation of native microbiota using corn stover as texturizer produced appreciable changes in the microbial diversity of polluted soils, shifting native microbial communities in favor of degrading specific populations. Functional metagenomics showed changes in gene abundance suggesting a bias towards aromatic hydrocarbon and intermediary degradation pathways, which greatly favored PAH mineralization. In contrast, pathways favoring the formation of toxic intermediates such as cytochrome P450-mediated reactions were found to be significantly reduced in bioaugmented soils. PAH biodegradation in soil using the microbial consortium was faster and reached higher degradation values (84% after 30 d) as a result of an increased co-metabolic degradation when compared with other mixed microbial consortia. The main differences between inoculated and non-inoculated soils were observed in aromatic ring-hydroxylating dioxygenases, laccase, protocatechuate, salicylate and benzoate-degrading enzyme genes. Based on our results, we propose that several concurrent metabolic pathways are taking place in soils during PAH degradation. Copyright © 2016 Elsevier B.V. All rights reserved.

Organic Matter Dynamics in Soils Regenerating from Degraded ...

African Journals Online (AJOL)

The area of secondary forest (SF) regenerating from degraded abandoned rubber (Hevea brasiliensis) plantation is increasing in the rainforest zone of south southern Nigeria; however, the build-up of soil organic matter following abandonment is not well understood. This study examined the build-up of soil organic matter in ...

Effect of Polylactic Acid-Degradable Film Mulch on Soil Temperature and Cotton Yield

Directory of Open Access Journals (Sweden)

ZHANG Ni

2016-03-01

Full Text Available Concern on biodegradable plastic film is increasing because of pollution problems caused by the plastic films currently used. The objective of this field experiment is to evaluate the effect of two thicknesses of polyactic acid-degradable film on soil temperature and cotton yield. The results showed that small holes appeared in the polyactic acid-degradable film at 17~22 d after it was installed. Burst period appeared about 60 d after installation. Splits were observed in the polyactic acid-degradable film at 130 d after installation. Soil temperatures rose slowly under polyactic acid-degradable film during the cotton seedling stage. Daytime soil temperatures were 0.8℃ and 6.2℃ lower under 18μm and 15μm thick polyactic acid-degradable film than non-degradable plastic film(CK, respectively. Nighttime soil temperatures under the polyactic acid-degradable film were about 1℃ warmer than CK. There was no significant difference in cotton yields between the 18μm polyactic acid degradable film treatment and CK. In contrast, yields in the 15μm degradable plastic film treatment were 8.9% less than that in CK. This study indicated that 18μm polyactic acid degradable plastic film had good degradability and no negative effect on cotton growth. The 18μm polyactic acid degradable plastic film can replace ordinary plastic film in agricultural production.

Soil physical degradation by human activities in the zone II of the basin of Burgos, Tamaulipas, Mexico; Degradacion fisica del suelo por actividades antorpicas en la zona II de la cuenca de burgos, Tamaulipas, Mexico

Energy Technology Data Exchange (ETDEWEB)

Arias Mino, F.; Espinosa Rmirez, M.; Andrade Limas, E.; Castro Meza, B.; Romero Diaz, A.

2009-07-01

The objective of this work was to characterize the physical degradation of the soil for antropic activities during the years 2007 and 2008 in the II zone of the Burgos Basin in Tamaulipas, Mexico. In this region, human action manifests itself due to activities such as agriculture, livestock and industry. The conventional farming, based mainly on the cultivation of sorghum, is characterized by great mechanization and tilling the soil which has contributed in large measure to aggravate erosion processes. There is also some logging, mainly for charcoal production and, recently, has joined the exploration and exploitation of natural gas. We used the methodology for Assessment of Soil Degradation (ASSOD) to identify, located and define the types of soil degradation within physiographic units. Results showed that nearly 74% of the study area presents some kind of degradation. The main process was water erosion, followed, by compaction and wind erosion. The main factors are essentially overgrazing and inadequate farming practices. Approximately 60% of the units evaluated presented a moderate level of degradation, but the speed of this process indicates that maintenance works are needed to reverse. (Author) 7 refs.

Current State and Development of Land Degradation Processes Based on Soil Monitoring in Slovakia

Directory of Open Access Journals (Sweden)

Kobza Jozef

2017-08-01

Full Text Available Current state and development of land degradation processes based on soil monitoring system in Slovakia is evaluated in this contribution. Soil monitoring system in Slovakia is consistently running since 1993 year in 5-years repetitions. Soil monitoring network in Slovakia is constructed using ecological principle, taking into account all main soil types and subtypes, soil organic matter, climatic regions, emission regions, polluted and non-polluted regions as well as various land use. The result of soil monitoring network is 318 sites on agricultural land in Slovakia. Soil properties are evaluated according to the main threats to soil relating to European Commission recommendation for European soil monitoring performance as follows: soil erosion and compaction, soil acidification, decline in soil organic matter and soil contamination. The most significant change has been determined in physical degradation of soils. The physical degradation was especially manifested in compacted and the eroded soils. It was determined that about 39% of agricultural land is potentially affected by soil erosion in Slovakia. In addition, slight decline in soil organic matter indicates the serious facts on evaluation and extension of soil degradation processes during the last period in Slovakia. Soil contamination is without significant change for the time being. It means the soils contaminated before soil monitoring process this unfavourable state lasts also at present.

Differentiating climate- and human-induced drivers of grassland degradation in the Liao River Basin, China.

Science.gov (United States)

He, Chunyang; Tian, Jie; Gao, Bin; Zhao, Yuanyuan

2015-01-01

Quantitatively distinguishing grassland degradation due to climatic variations from that due to human activities is of great significance to effectively governing degraded grassland and realizing sustainable utilization. The objective of this study was to differentiate these two types of drivers in the Liao River Basin during 1999-2009 using the residual trend (RESTREND) method and to evaluate the applicability of the method in semiarid and semihumid regions. The relationship between the normalized difference vegetation index (NDVI) and each climatic factor was first determined. Then, the primary driver of grassland degradation was identified by calculating the change trend of the normalized residuals between the observed and the predicted NDVI assuming that climate change was the only driver. We found that the RESTREND method can be used to quantitatively and effectively differentiate climate and human drivers of grassland degradation. We also found that the grassland degradation in the Liao River Basin was driven by both natural processes and human activities. The driving factors of grassland degradation varied greatly across the study area, which included regions having different precipitation and altitude. The degradation in the Horqin Sandy Land, with lower altitude, was driven mainly by human activities, whereas that in the Kungl Prairie, with higher altitude and lower precipitation, was caused primarily by climate change. Therefore, the drivers of degradation and local conditions should be considered in an appropriate strategy for grassland management to promote the sustainability of grasslands in the Liao River Basin.

CARBON FIXING CAPACITY OF AMAZONIAN SOILS IN RELATION TO ITS DEGRADATION CONDITIONS

OpenAIRE

Clara Patricia Peña Venegas; Edmundo Rafael Mendoza Olmos; Carlos Hernando Rodríguez León; Gladys Inés Cardona Vanegas; Bernardo Eusebio Betancurt Parra; Maolenmarx Tatiana Garzón Gómez

2015-01-01

Amazonian deforestation and transformation alert about their effects worldwide. One concern is the increase of the Carbon (C) levels emitted. Previous works have estimated the fixed C in Amazon forests without including the C stored in soils. Within soil, the organic carbon molecules are highly sensitive to degradation, affecting the natural capacity of soils to fix and store C. The present study evaluates the impact of degradation in the natural capacity of Amazon soils to fix C. Thirty five...

Degradation of dibutyl phthalate in two contrasting agricultural soils and its long-term effects on soil microbial community.

Science.gov (United States)

Cheng, Jinjin; Liu, Yanai; Wan, Qun; Yuan, Li; Yu, Xiangyang

2018-06-04

Due to its widespread application and large-scale production, dibutyl phthalate (DBP) has become one of the most frequently identified phthalic acid esters (PAEs) in soils. The fate of DBP and its effects on microbial communities in soils with contrasting properties have seldom been studied. In this study, the degradation of DBP and its long-term effects on the soil microbial community were investigated in aquic cambisols and udic ferrosols. The half-lives of DBP in aquic cambisols and udic ferrosols were found to be 0.286-1.41 days and 0.870-20.4 days, respectively, indicating that DBP was degraded faster in aquic cambisols. In addition, the degradation of DBP in aquic cambisols was less vulnerable to adverse incubation conditions, including high DBP concentration, low temperature and low moisture. These results can be ascribed to the higher microbial abundance and activity in aquic cambisols than in udic ferrosols. During DBP degradation, the toxic metabolite monobutyl phthalate (MBP) was present only transiently and did not accumulate in the two soils. After 60 days of incubation, the degradation-resistant DBP residue concentrations were as high as 1.10 and 1.34 mg/kg, and the relative abundance of 8.51%-12.9% of bacterial genera and 5.59%-6.02% of fungal genera was significantly disturbed by DBP in both test soils. The results from this study highlight the need to comprehensively evaluate the environmental risks of degradation-resistant DBP residues and the impact of DBP contamination on soil microbial functions. Copyright © 2018. Published by Elsevier B.V.

Short-term rhizosphere effect on available carbon sources, phenanthrene degradation and active microbiome in an aged-contaminated industrial soil

Directory of Open Access Journals (Sweden)

François eThomas

2016-02-01

Full Text Available Over the last decades, understanding of the effects of plants on soil microbiomes has greatly advanced. However, knowledge on the assembly of rhizospheric communities in aged-contaminated industrial soils is still limited, especially with regard to transcriptionally active microbiomes and their link to the quality or quantity of carbon sources. We compared the short-term (2-10 days dynamics of bacterial communities and potential PAH-degrading bacteria in bare or ryegrass-planted aged-contaminated soil spiked with phenanthrene, put in relation with dissolved organic carbon sources and polycyclic aromatic hydrocarbon (PAH pollution. Both resident and active bacterial communities (analyzed from DNA and RNA, respectively showed higher species richness and smaller dispersion between replicates in planted soils. Root development strongly favored the activity of Pseudomonadales within the first two days, and of members of Actinobacteria, Caulobacterales, Rhizobiales and Xanthomonadales within 6-10 days. Plants slowed down the dissipation of phenanthrene, while root exudation provided a cocktail of labile substrates that might preferentially fuel microbial growth. Although the abundance of PAH-degrading genes increased in planted soil, their transcription level stayed similar to bare soil. In addition, network analysis revealed that plants induced an early shift in the identity of potential phenanthrene degraders, which might influence PAH dissipation on the long-term.

Factors mediating the restoration of structurally degraded soils

DEFF Research Database (Denmark)

Arthur, Emmanuel; Moldrup, Per; Schjønning, Per

with the ability of soils to perform these functions. The present study examines the roles of clay mineralogy, native organic matter, and exogenous organic material on the restoration of structurally degraded soils. Totally seven soils from Denmark and Ghana - five soils dominated by illites, one kaolinitic soil...... the incubation period, structural stability estimated as the amount of water-dispersible clay decreased with prevailing moisture content, and native organic matter. Also, microbial activity significantly increased with addition of exogenous organic matter. At the end of incubation, there was significant...... macroaggregation, decreased bulk density, and increased equivalent pore diameter and tortuosity (derived from measurements of soil-gas diffusivity and soil-air permeability) for all soils. Although aggregate friability was not affected by clay type, aggregate workability was highest for the kaolinitic soil...

Thermal properties of degraded lowland peat-moorsh soils

Science.gov (United States)

Gnatowski, Tomasz

2016-04-01

Soil thermal properties, i.e.: specific heat capacity (c), thermal conductivity (K), volumetric heat capacity (C) govern the thermal environment and heat transport through the soil. Hence the precise knowledge and accurate predictions of these properties for peaty soils with high amount of organic matter are especially important for the proper forecasting of soil temperature and thus it may lead to a better assessment of the greenhouse gas emissions created by microbiological activity of the peatlands. The objective of the study was to develop the predictive models of the selected thermal parameters of peat-moorsh soils in terms of their potential applicability for forecasting changes of soil temperature in degraded ecosystems of the Middle Biebrza River Valley area. Evaluation of the soil thermal properties was conducted for the parameters: specific heat capacity (c), volumetric heat capacities of the dry and saturated soil (Cdry, Csat) and thermal conductivities of the dry and saturated soil (Kdry, Ksat). The thermal parameters were measured using the dual-needle probe (KD2-Pro) on soil samples collected from seven peaty soils, representing total 24 horizons. The surface layers were characterized by different degrees of advancement of soil degradation dependent on intensiveness of the cultivation practises (peaty and humic moorsh). The underlying soil layers contain peat deposits of different botanical composition (peat-moss, sedge-reed, reed and alder) and varying degrees of decomposition of the organic matter, from H1 to H7 (von Post scale). Based on the research results it has been shown that the specific heat capacity of the soils differs depending on the type of soil (type of moorsh and type of peat). The range of changes varied from 1276 J.kg-1.K-1 in the humic moorsh soil to 1944 J.kg-1.K-1 in the low decomposed sedge-moss peat. It has also been stated that in degraded peat soils with the increasing of the ash content in the soil the value of specific heat

Degradation of 2,4-DB in Argentinean agricultural soils with high humic matter content.

Science.gov (United States)

Cuadrado, Virginia; Merini, Luciano J; Flocco, Cecilia G; Giulietti, Ana M

2008-01-01

The dissipation of 4-(2,4-dichlorophenoxy) butyric acid (2,4-DB) in high-humic-matter-containing soils from agricultural fields of the Argentinean Humid Pampa region was studied, employing soil microcosms under different experimental conditions. The added herbicide was dissipated almost completely by soils with and without history of herbicide use by day 28. At 500 ppm, both soils showed the same degradation rates; but at 5-ppm concentration, the chronically exposed soil demonstrated a faster degradation of the herbicide. 2,4-DB addition produced increases in herbicide-degrading bacteria of three and 1.5 orders of magnitude in soils with and without history of herbicide use, respectively, in microcosms with 5 ppm. At 500-ppm concentration, the increase in 2,4-DB degraders was five orders of magnitude after 14 days, independent of the history of herbicide use. No differences were observed in either 2,4-DB degradation rates or in degrader bacteria numbers in the presence and absence of alfalfa plants, in spite of some differential characteristics in patterns of 2,4-DB metabolite accumulation. The main factor affecting 2,4-DB degradation rate would be the history of herbicide use, as a consequence of the adaptation of the indigenous microflora to the presence of herbicides in the field.

Pathogenic prion protein is degraded by a manganese oxide mineral found in soils

Science.gov (United States)

Russo, F.; Johnson, C.J.; McKenzie, D.; Aiken, Judd M.; Pedersen, J.A.

2009-01-01

Prions, the aetiological agents of transmissible spongiform encephalopathies, exhibit extreme resistance to degradation. Soil can retain prion infectivity in the environment for years. Reactive soil components may, however, contribute to the inactivation of prions in soil. Members of the birnessite family of manganese oxides (MnO2) rank among the strongest natural oxidants in soils. Here, we report the abiotic degradation of pathogenic prion protein (PrPTSE) by a synthetic analogue of naturally occurring birnessite minerals. Aqueous MnO2 suspensions degraded the PrPTSE as evidenced by decreased immunoreactivity and diminished ability to seed protein misfolding cyclic amplification reactions. Birnessite-mediated PrPTSE degradation increased as a solution's pH decreased, consistent with the pH-dependence of the redox potential of MnO2. Exposure to 5.6 mg MnO2 ml-1 (PrPTSE:MnO2=1 : 110) decreased PrPTSE levels by ???4 orders of magnitude. Manganese oxides may contribute to prion degradation in soil environments rich in these minerals. ?? 2009 SGM.

Effect of elevated CO2 on degradation of azoxystrobin and soil microbial activity in rice soil.

Science.gov (United States)

Manna, Suman; Singh, Neera; Singh, V P

2013-04-01

An experiment was conducted in open-top chambers (OTC) to study the effect of elevated CO2 (580 ± 20 μmol mol(-1)) on azoxystrobin degradation and soil microbial activities. Results indicated that elevated CO2 did not have any significant effect on the persistence of azoxystrobin in rice-planted soil. The half-life values for the azoxystrobin in rice soils were 20.3 days in control (rice grown at ambient CO2 outdoors), 19.3 days in rice grown under ambient CO2 atmosphere in OTC, and 17.5 days in rice grown under elevated CO2 atmosphere in OTC. Azoxystrobin acid was recovered as the only metabolite of azoxystrobin, but it did not accumulate in the soil/water and was further metabolized. Elevated CO2 enhanced soil microbial biomass (MBC) and alkaline phosphatase activity of soil. Compared with rice grown at ambient CO2 (both outdoors and in OTC), the soil MBC at elevated CO2 increased by twofold. Elevated CO2 did not affect dehydrogenase, fluorescein diacetate, and acid phosphatase activity. Azoxystrobin application to soils, both ambient and elevated CO2, inhibited alkaline phosphates activity, while no effect was observed on other enzymes. Slight increase (1.8-2 °C) in temperature inside OTC did not affect microbial parameters, as similar activities were recorded in rice grown outdoors and in OTC at ambient CO2. Higher MBC in soil at elevated CO2 could be attributed to increased carbon availability in the rhizosphere via plant metabolism and root secretion; however, it did not significantly increase azoxystrobin degradation, suggesting that pesticide degradation was not the result of soil MBC alone. Study suggested that increased CO2 levels following global warming might not adversely affect azoxystrobin degradation. However, global warming is a continuous and cumulative process, therefore, long-term studies are necessary to get more realistic assessment of global warming on fate of pesticide.

HD domain of SAMHD1 influences Vpx-induced degradation at a post-interaction step

Energy Technology Data Exchange (ETDEWEB)

Kang, Jian; Hou, Jingwei; Zhao, Ke; Yu, Xiao-Fang; Du, Juan, E-mail: jdu@jlu.edu.cn

2016-02-12

Primate SAMHD1 proteins are potent inhibitors of viruses, including retroviruses such as HIV-1, HIV-2, and SIV. Vpx, a distinctive viral protein expressed by HIV-2 and some SIVs, induces SAMHD1 degradation by forming a Vpx-DCAF1-based ubiquitin ligase complex. Either the N- or the C-terminus of SAMHD1 is critical for Vpx-induced degradation, depending on the types of SAMHD1 and Vpx proteins. However, it was not fully understood whether other regions of SAMHD1 also contribute to its depletion by Vpx. In the present study, we report that SAMHD1 from chicken (SAMHD1{sub GG}) was not degraded by SIVmac Vpx, in contrast with results for human SAMHD1 (SAMHD1{sub HS}). Results regarding to SAMHD1{sub HS} and SAMHD1{sub GG} fusion proteins supported previous findings that the C-terminus of SAMHD1{sub HS} is essential for Vpx-induced degradation. Internal domain substitution, however, revealed that the HD domain also contributes to Vpx-mediated SAMHD1 degradation. Interestingly, the HD domain influenced Vpx-mediated SAMHD1 degradation without affecting Vpx-SAMHD1 interaction. Therefore, our findings revealed that factors in addition to Vpx-SAMHD1 binding influence the efficiency of Vpx-mediated SAMHD1 degradation. - Highlights: • SAMHD1{sub GG} from chicken could not be depleted by SIVmac Vpx. • The C-terminus of human SAMHD1{sub HS} is critical for its degradation by Vpx. • The HD domain is essential for Vpx-induced degradation of SAMHD1{sub HS}. • Altering the HD domain does not affect Vpx-SAMHD1 interaction.

Microbial degradation of metalaxyl in soil

Energy Technology Data Exchange (ETDEWEB)

Musumeci, M.R.; Ruegg, E.F. (Instituto Biologico, Sao Paulo (Brazil). Centro de Radioisotopos)

1984-10-01

The behaviour of the fungicide metalaxyl in purple latosol soil was investigated using a ring - /sup 14/C labelled compound under laboratory conditions. In nonsterile soil samples under aerobic conditions, metalaxyl was degraded into two metabolites. After 60 days, 60% of the radiocarbon on TLC plates corresponded to the parent fungicide, 22% to its metabolite N-(2-methoxyacetyl)-N-(2,6-xylyl)-DL-alanine, and 2.7% to a second and unidentified metabolite. The U.V. absorbance value of metalaxyl decreased after seven days incubation with a soil microorganisms suspension. Incubation of /sup 14/C-metalaxyl for 50 days with a bacterium or a fungus isolated from that suspension resulted in metalaxyl gradual disappearance from the medium, but not metabolites were detected during this period.

[Oil degradation by basidiomycetes in soil and peat at low temperatures].

Science.gov (United States)

Kulikova, N A; Klein, O I; Pivchenko, D V; Landesman, E O; Pozdnyakova, N N; Turkovskaya, O V; Zaichik, B Ts; Ruzhitskii, A O; Koroleva, O V

2016-01-01

A total of 17 basidiomycete strains causing white rot and growing on oil-contaminated substrates have been screened. Three strains with high (Steccherinum murashkinskyi), average (Trametes maxima), and low (Pleurotus ostreatus) capacities for the colonization of oil-contaminated substrates have been selected. The potential for degrading crude oil hydrocarbons has been assessed with the use of fungi grown on nonsterile soil and peat at low temperatures. Candida sp. and Rhodococcus sp. commercial strains have been used as reference organisms with oil-degrading ability. All microorganisms introduced in oil-contaminated soil have proved to be ineffective, whereas the inoculation of peat with basidiomycetes and oil-degrading microorganisms accelerated the destruction of oil hydrocarbons. The greatest degradation potential of oil-aliphatic hydrocarbons has been found in S. murashlinskyi. T. maxima turned out to be the most successful in degrading aromatic hydrocarbons. It has been suggested that aboriginal microflora contributes importantly to the effectiveness of oil-destructing microorganisms. T. maxima and S. murashkinskyi strains are promising for further study as oil-oxidizing agents during bioremediation of oil-contaminated peat soil under conditions of low temperatures.

Visible and infrared spectroscopy to evaluate soil quality in degraded sites: an applicative study in southern Italy

Science.gov (United States)

Ancona, Valeria; Matarrese, Raffaella; Salvatori, Rosamaria; Salzano, Roberto; Regano, Simona; Calabrese, Angelantonio; Campanale, Claudia; Felice Uricchio, Vito

2014-05-01

Land degradation processes like organic matter impoverishment and contamination are growing increasingly all over the world due to a non-rational and often sustainable spread of human activities on the territory. Consequently the need to characterize and monitor degraded sites is becoming very important, with the aim to hinder such main threats, which could compromise drastically, soil quality. Visible and infrared spectroscopy is a well-known technique/tool to study soil properties. Vis-NIR spectral reflectance, in fact, can be used to characterize spatial and temporal variation in soil constituents (Brown et al., 2006; Viscarra Rossel et al., 2006), and potentially its surface structure (Chappell et al., 2006, 2007). It is a rapid, non-destructive, reproducible and cost-effective analytical method to analyse soil properties and therefore, it can be a useful method to study land degradation phenomena. In this work, we present the results of proximal sensing investigations of three degraded sites (one affected by organic and inorganic contamination and two affected by soil organic matter decline) situated southern Italy close to Taranto city (in Apulia Region). A portable spectroradiometer (ASD-FieldSpec) was used to measure the reflectance properties in the spectral range between 350-2500 nm of the soil, in the selected sites, before and after a recovery treatment by using compost (organic fertilizer). For each measurement point the soil was sampled in order to perform chemical analyses to evaluate soil quality status. Three in-situ campaigns have been carried out (September 2012, June 2013, and September 2013), collecting about 20 soil samples for each site and for each campaign. Chemical and spectral analyses have been focused on investigating soil organic carbon, carbonate content, texture and, in the case of polluted site, heavy metals and organic toxic compounds. Statistical analyses have been carried out to test a prediction model of different soil quality

Identification of anthraquinone-degrading bacteria in soil contaminated with polycyclic aromatic hydrocarbons.

Science.gov (United States)

Rodgers-Vieira, Elyse A; Zhang, Zhenfa; Adrion, Alden C; Gold, Avram; Aitken, Michael D

2015-06-01

Quinones and other oxygenated polycyclic aromatic hydrocarbons (oxy-PAHs) are toxic and/or genotoxic compounds observed to be cocontaminants at PAH-contaminated sites, but their formation and fate in contaminated environmental systems have not been well studied. Anthracene-9,10-dione (anthraquinone) has been found in most PAH-contaminated soils and sediments that have been analyzed for oxy-PAHs. However, little is known about the biodegradation of oxy-PAHs, and no bacterial isolates have been described that are capable of growing on or degrading anthraquinone. PAH-degrading Mycobacterium spp. are the only organisms that have been investigated to date for metabolism of a PAH quinone, 4,5-pyrenequinone. We utilized DNA-based stable-isotope probing (SIP) with [U-(13)C]anthraquinone to identify bacteria associated with anthraquinone degradation in PAH-contaminated soil from a former manufactured-gas plant site both before and after treatment in a laboratory-scale bioreactor. SIP with [U-(13)C]anthracene was also performed to assess whether bacteria capable of growing on anthracene are the same as those identified to grow on anthraquinone. Organisms closely related to Sphingomonas were the most predominant among the organisms associated with anthraquinone degradation in bioreactor-treated soil, while organisms in the genus Phenylobacterium comprised the majority of anthraquinone degraders in the untreated soil. Bacteria associated with anthracene degradation differed from those responsible for anthraquinone degradation. These results suggest that Sphingomonas and Phenylobacterium species are associated with anthraquinone degradation and that anthracene-degrading organisms may not possess mechanisms to grow on anthraquinone. Copyright © 2015, American Society for Microbiology. All Rights Reserved.

A Perspective on Water Resources in China. Interactions between Climate Change and Soil Degradation

Energy Technology Data Exchange (ETDEWEB)

Tao, Fulu; Lin, Erda [Chinese Academy of Agricultural Sciences, Institute of Agricultural Environment and Sustainable Development, Beijing, 100081 (China); Yokozawa, M.; Hayashi, Y. [National Institute for Agro-Environmental Sciences, 3-1-3 Kannondai, Tsukuba, Ibaraki 305-8604 (Japan)

2005-01-01

Water is one of the most critical resources in China. Climate change and soil degradation will be two major, interrelated environmental challenges faced by managers of water resources in coming decades. In this study, we used a water-balance model and updated databases to assess the interacting impacts of climate change and soil degradation on China's future water resources. We plotted the spatial pattern of changes in actual and potential evapotranspiration, soil moisture deficits, and surface runoff across China in the 2020s using a resolution of 0.5{sup o} latitude and longitude under scenarios based on climate change, soil degradation, and a combination of the two. The results showed that climate change would affect the magnitude and spatial pattern of water resources on a national scale. Some regions in central, southwestern, and northeastern China would become more vulnerable to disastrous drought and floods as a result of soil degradation. Under the combined impacts of climate change and soil degradation, soil moisture deficits would increase most in central, western, and southwestern China; surface runoff would increase most in southeastern China. More detailed process-based models are needed to capture feedback mechanisms more effectively.

[Characteristics of soil microbes and enzyme activities in different degraded alpine meadows].

Science.gov (United States)

Yin, Ya Li; Wang, Yu Qin; Bao, Gen Sheng; Wang, Hong Sheng; Li, Shi Xiong; Song, Mei Ling; Shao, Bao Lian; Wen, Yu Cun

2017-12-01

Soil microbial biomass C and N, microbial diversities and enzyme activity in 0-10 cm and 10-20 cm soil layers of different degraded grasslands (non-degradation, ND; light degradation, LD; moderate degradation, MD; sever degradation, SD; and black soil beach, ED) were measured by Biolog and other methods. The results showed that: 1) There were significant diffe-rences between 0-10 cm and 10-20 cm soil layers in soil microbial biomass, diversities and inver-tase activities in all grasslands. 2) The ratio of soil microbial biomass C to N decreased significantly with the grassland degradation. In the 0-10 cm soil layer, microbial biomass C and N in ND and LD were significantly higher than that in MD, SD and ED. Among the latter three kinds of grasslands, there was no difference for microbial biomass C, but microbial biomass N was lower in MD than in the other grasslands. The average color change rate (AWCD) and McIntosh Index (U) also decreased with grassland degradation, but only the reduction from ND to MD was significant. There were no differences among all grasslands for Shannon index (H) and Simpson Index (D). The urease activity was highest in MD and SD, and the activity of phosphatase and invertase was lowest in ED. In the 10-20 cm soil layer, microbial biomass C in ND and LD were significantly higher than that in the other grasslands. Microbial biomass N in LD and ED were significantly higher than that in the other grasslands. Carbon metabolism index in MD was significantly lower than that in LD and SD. AWCD and U index in ND and LD were significantly higher than that in ED. H index and D index showed no difference among different grasslands. The urease activity in ND and MD was significantly higher than that in the other grasslands. The phosphatase activity was highest in MD, and the invertase activity was lowest in MD. 3) The belowground biomass was significantly positively correlated with microbial biomass, carbon metabolic index and phosphatase activity

Atrazine and its metabolites degradation in mineral salts medium and soil using an enrichment culture.

Science.gov (United States)

Kumar, Anup; Singh, Neera

2016-03-01

An atrazine-degrading enrichment culture was used to study degradation of atrazine metabolites viz. hydroxyatrazine, deethylatrazine, and deisopropylatrazine in mineral salts medium. Results suggested that the enrichment culture was able to degrade only hydroxyatrazine, and it was used as the sole source of carbon and nitrogen. Hydroxyatrazine degradation slowed down when sucrose and/or ammonium hydrogen phosphate were supplemented as the additional sources of carbon and nitrogen, respectively. The enrichment culture could degrade high concentrations of atrazine (up to 110 μg/mL) in mineral salts medium, and neutral pH was optimum for atrazine degradation. Further, except in an acidic soil, enrichment culture was able to degrade atrazine in three soil types having different physico-chemical properties. Raising the pH of acidic soil to neutral or alkaline enabled the enrichment culture to degrade atrazine suggesting that acidic pH inhibited atrazine-degrading ability. The study suggested that the enrichment culture can be successfully utilized to achieve complete degradation of atrazine and its persistent metabolite hydroxyatrazine in the contaminated soil and water.

Soil degradation in Sub-Saharan Africa

NARCIS (Netherlands)

Hartemink, A.E.; Keulen, van H.

2005-01-01

Soil degradation in Sub-Sahara Africa has been much debated in the past decades. Although there are many different views, at the extremes there are those who are of the opinion that the problem is very serious and the main cause for the poverty and food crises and those that are convinced that it is

Distribution of Anaerobic Hydrocarbon-Degrading Bacteria in Soils from King George Island, Maritime Antarctica.

Science.gov (United States)

Sampaio, Dayanna Souza; Almeida, Juliana Rodrigues Barboza; de Jesus, Hugo E; Rosado, Alexandre S; Seldin, Lucy; Jurelevicius, Diogo

2017-11-01

Anaerobic diesel fuel Arctic (DFA) degradation has already been demonstrated in Antarctic soils. However, studies comparing the distribution of anaerobic bacterial groups and of anaerobic hydrocarbon-degrading bacteria in Antarctic soils containing different concentrations of DFA are scarce. In this study, functional genes were used to study the diversity and distribution of anaerobic hydrocarbon-degrading bacteria (bamA, assA, and bssA) and of sulfate-reducing bacteria (SRB-apsR) in highly, intermediate, and non-DFA-contaminated soils collected during the summers of 2009, 2010, and 2011 from King George Island, Antarctica. Signatures of bamA genes were detected in all soils analyzed, whereas bssA and assA were found in only 4 of 10 soils. The concentration of DFA was the main factor influencing the distribution of bamA-containing bacteria and of SRB in the analyzed soils, as shown by PCR-DGGE results. bamA sequences related to genes previously described in Desulfuromonas, Lautropia, Magnetospirillum, Sulfuritalea, Rhodovolum, Rhodomicrobium, Azoarcus, Geobacter, Ramlibacter, and Gemmatimonas genera were dominant in King George Island soils. Although DFA modulated the distribution of bamA-hosting bacteria, DFA concentration was not related to bamA abundance in the soils studied here. This result suggests that King George Island soils show functional redundancy for aromatic hydrocarbon degradation. The results obtained in this study support the hypothesis that specialized anaerobic hydrocarbon-degrading bacteria have been selected by hydrocarbon concentrations present in King George Island soils.

Interrelationships of Land Use/Cover Change and Topography with Soil Acidity and Salinity as Indicators of Land Degradation

Directory of Open Access Journals (Sweden)

Ramita Manandhar

2014-03-01

Full Text Available As soil is the basis of all terrestrial ecosystems, degraded soil means lower fertility, reduced biodiversity and reduced human welfare. Therefore the focus of this paper is on elucidating the influence of land use and land cover (LULC change on two important soil quality indicators that are fundamental to effective measures for ameliorating soil degradation; namely soil acidity and soil salinity in the Lower Hunter Valley of New South Wales, Australia. First, Analysis of Variance was used to elucidate the effects of LULC categories on soil acidity and salinity. The results indicate that soils under Vineyard have significantly higher pH. In contrast there is no significant effect of LULC or its change on soil salinity. To further elucidate the complex interactions of these soil quality indicators with landscape attributes over 20 years and other terrain attributes, multivariate ordination techniques (correspondence analysis and canonical correspondence analysis were used. The results show that elevation exerted a more dominant influence on pH than the LULC types and their dynamics. In comparison, salinity of the soil appears to be higher in subsoil layers under woodland than under other LULC categories. The environmental implications of these interactions, as evidenced by this study, provide some insights for future land use planning in the region.

Estimation of p,p'-DDT degradation in soil by modeling and constraining hydrological and biogeochemical controls.

Science.gov (United States)

Sanka, Ondrej; Kalina, Jiri; Lin, Yan; Deutscher, Jan; Futter, Martyn; Butterfield, Dan; Melymuk, Lisa; Brabec, Karel; Nizzetto, Luca

2018-08-01

Despite not being used for decades in most countries, DDT remains ubiquitous in soils due to its persistence and intense past usage. Because of this it is still a pollutant of high global concern. Assessing long term dissipation of DDT from this reservoir is fundamental to understand future environmental and human exposure. Despite a large research effort, key properties controlling fate in soil (in particular, the degradation half-life (τ soil )) are far from being fully quantified. This paper describes a case study in a large central European catchment where hundreds of measurements of p,p'-DDT concentrations in air, soil, river water and sediment are available for the last two decades. The goal was to deliver an integrated estimation of τ soil by constraining a state-of-the-art hydrobiogeochemical-multimedia fate model of the catchment against the full body of empirical data available for this area. The INCA-Contaminants model was used for this scope. Good predictive performance against an (external) dataset of water and sediment concentrations was achieved with partitioning properties taken from the literature and τ soil estimates obtained from forcing the model against empirical historical data of p,p'-DDT in the catchment multicompartments. This approach allowed estimation of p,p'-DDT degradation in soil after taking adequate consideration of losses due to runoff and volatilization. Estimated τ soil ranged over 3000-3800 days. Degradation was the most important loss process, accounting on a yearly basis for more than 90% of the total dissipation. The total dissipation flux from the catchment soils was one order of magnitude higher than the total current atmospheric input estimated from atmospheric concentrations, suggesting that the bulk of p,p'-DDT currently being remobilized or lost is essentially that accumulated over two decades ago. Copyright © 2018 Elsevier Ltd. All rights reserved.

Assessment of Soil Degradation in The Northern Part of Nile Delta, Egypt, Using Remote Sensing and Gis Techniques

International Nuclear Information System (INIS)

El Nahry, A.H.; Ibraheim, M.M.; El Baroudy, A.A.

2008-01-01

The present work aims at monitoring soil degradation process within the last two decades in the northern part of Nile Delta .The investigated area lies between longitudes 31 00 and 31 15 E and latitudes 31 00 and 31 37 N, covering an area of about 344584.01 feddans. Detecting soil degradation and recognizing its various types is a necessity to take the practical measures for combating it as well as conserving and keeping the agricultural soil healthy. Land degradation was assessed by adopting new approach through the integration of GLASOD/ FAa approach and Remote Sensing / GIS techniques .The main types of human induced soil degradation that observed in the studied area are salinity, alkalinity (sodicity), compaction and water logging .On the other hand water erosion because of sea rise is assessed. The obtained data showed that, areas that were affected by compaction increment have been spatially enlarged by 40.9 % and those affected by compaction decrease have been spatially reduced by 22.6 % of the total area, meanwhile areas that have been unchanged were estimated by 36.5% of the total area. The areas that were affected by water logging increase have been spatially enlarged by 52.2 % and those affected by water logging decrease have been spatially reduced by 10.1 % of the total area, meanwhile the areas which have been unchanged were represented by 37.7 % of the total area. Areas that were affected by salinity increase have been spatially enlarged by 31.4 % of the total area and those affected by salinity decrease have been reduced by 43.3 % of the total area. An area represented by 25.2 % of the total area has been unchanged. Alkalinization (sodicity) was expressed by the exchangeable sodium percentage (ESP).Areas that were affected by sodicity increase have been spatially enlarged by 33.7 %, meanwhile those affected by sodicity decrease have been spatially reduced by 33.6 % of the total area. An area represented by 32.6 % of the total area has been unchanged

Effects of soil organic matter on the development of the microbial polycyclic aromatic hydrocarbons (PAHs) degradation potentials

International Nuclear Information System (INIS)

Yang, Y.; Zhang, N.; Xue, M.; Lu, S.T.; Tao, S.

2011-01-01

The microbial activity in soils was a critical factor governing the degradation of organic micro-pollutants. The present study was conducted to analyze the effects of soil organic matter on the development of degradation potentials for polycyclic aromatic hydrocarbons (PAHs). Most of the degradation kinetics for PAHs by the indigenous microorganisms developed in soils can be fitted with the Logistic growth models. The microbial activities were relatively lower in the soils with the lowest and highest organic matter content, which were likely due to the nutrition limit and PAH sequestration. The microbial activities developed in humic acid (HA) were much higher than those developed in humin, which was demonstrated to be able to sequester organic pollutants stronger. The results suggested that the nutrition support and sequestration were the two major mechanisms, that soil organic matter influenced the development of microbial PAHs degradation potentials. - Research highlights: → PAH degradation kinetics obey Logistic model. → Degradation potentials depend on soil organic carbon content. → Humin inhibits the development of PAH degradation activity. → Nutrition support and sequestration regulate microbial degradation capacity. - Soil organic matter regulated PAH degradation potentials through nutrition support and sequestration.

RECARE - Preventing and Remediating Degradation of Soils in Europe through Landcare.

Science.gov (United States)

van den Elsen, Erik; Hessel, Rudi; Verzandvoort, Simone; Ritsema, Coen; Geissen, Violette

2015-04-01

Although there is a large body of knowledge available on soil threats in Europe, this knowledge is fragmented and incomplete, in particular regarding the complexity and functioning of soil systems and their interaction with human activities. The main aim of the RECARE project is to develop effective prevention, remediation and restoration measures using an innovative trans-disciplinary approach, actively integrating and advancing knowledge of stakeholders and scientists in 17 Case Studies, covering a range of soil threats in different bio-physical and socio-economic environments across Europe. Within these Case Study sites, i) the current state of degradation and conservation will be assessed using a new methodology, based on the WOCAT mapping procedure, ii) impacts of degradation and conservation on soil functions and ecosystem services will be quantified in a harmonized, spatially explicit way, accounting for costs and benefits, and possible trade-offs, iii) prevention, remediation and restoration measures selected and implemented by stakeholders in a participatory process will be evaluated regarding efficacy, and iv) the applicability and impact of these measures at the European level will be assessed using a new integrated bio-physical and socio-economic model, accounting for land use dynamics as a result of for instance economic development and policies. Existing national and EU policies will be reviewed and compared to identify potential incoherence, contradictions and synergies. Policy messages will be formulated based on the Case Study results and their integration at European level. A comprehensive dissemination and communication strategy, including the development of a web-based Dissemination and Communication Hub, will accompany the other activities to ensure that project results are disseminated to a variety of stakeholders at the right time and in the appropriate formats to stimulate renewed care for European soils.

X-ray induced degradation of DNA in Aspergillus nidulans cells comparative analysis of UV- and X-ray induced DNA degradation

International Nuclear Information System (INIS)

Zinchenko, V.V.; Babykin, M.M.

1980-01-01

Irradiating cells of Aspergillus nidulans of the wild type in the logarythmical growth phase with X-rays leads to a certain retention in DNA synthesis. This period is characterized by an insignificant fermentative DNA degradation connected with a process of its repair. There is no direct dependence between the radiation dose and the level of DNA degradation. The investigation of X-ray induced DNA degradation in a number of UVS-mutants permits to show the existence of two branches of DNA degradation - dependent and independent of the exogenic energy source. The dependence of DNA degradation on albumen synthesis prior to irradiation and after it, is demonstrated. It is supposed that the level of X-ray induced DNA degradation is determined by two albumen systems, one of which initiates degradation and the other terminates it. The comparative analysis of UV and X-ray induced DNA degradation is carried out

Remediation of saline soils contaminated with crude oil using the halophyte Salicornia persica in conjunction with hydrocarbon-degrading bacteria.

Science.gov (United States)

Ebadi, Ali; Khoshkholgh Sima, Nayer Azam; Olamaee, Mohsen; Hashemi, Maryam; Ghorbani Nasrabadi, Reza

2018-05-08

The negative impact of salinity on plant growth and the survival of rhizosphere biota complicates the application of bioremediation to crude oil-contaminated saline soils. Here, a comparison was made between the remedial effect of treating the soil with Pseudomonas aeruginosa, a salinity tolerant hydrocarbon-degrading consortium in conjunction with either the halophyte Salicornia persica or the non-halophyte Festuca arundinacea. The effect of the various treatments on salinized soils was measured by assessing the extent of total petroleum hydrocarbon (TPH) degradation, the soil's dehydrogenase activity, the abundance of the bacteria and the level of phytotoxicity as measured by a bioassay. When a non-salinized soil was assessed after a treatment period of 120 days, the ranking for effectiveness with respect to TPH removal was F. arundinacea > P. aeruginosa > S. persica > no treatment control, while in the presence of salinity, the ranking changed to S. persica > P. aeruginosa > F. arundinacea > no treatment control. Combining the planting of S. persica or F. arundinacea with P. aeruginosa inoculation ("bioaugmentation") boosted the degradation of TPH up to 5-17%. Analyses of the residual oil contamination revealed that long chain alkanes (above C20) were particularly strongly degraded following the bioaugmentation treatments. The induced increase in dehydrogenase activity and the abundance of the bacteria (3.5 and 10 fold respectively) achieved in the bioaugmentation/S. persica treatment resulted in 46-76% reduction in soil phytotoxicity in a saline soil. The indication was that bioaugmentation of halophyte can help to mitigate the adverse effects on the effectiveness of bioremediation in a crude oil-contaminated saline soil. Copyright © 2018 Elsevier Ltd. All rights reserved.

The Influence of Cattle Wastes on Degraded Savanna Soils of ...

African Journals Online (AJOL)

This paper examines the effects of cattle wastes on degraded savanna soils of Kwara State, Nigeria. A total of 40 soil samples were systematically collected from five quadrats of 12m x 12m. In 4 identified cattle sheds and 1 in adjacent fallow land (control field) on the same soil, climatic type and ecological zone. Standard ...

Adsorption and degradation of sulfadiazine and sulfamethoxazole in an agricultural soil system under an anaerobic condition: Kinetics and environmental risks.

Science.gov (United States)

Shen, Genxiang; Zhang, Yu; Hu, Shuangqing; Zhang, Hongchang; Yuan, Zhejun; Zhang, Wei

2018-03-01

Sulfonamides, one of the commonest antibiotics, were widely used on humans and livestock to control pathema and bacterial infections resulting in further environmental risks. The present study evaluated the adsorption and degradation of sulfadiazine (SDZ) and sulfamethoxazole (SMX) in an agricultural soil system under an anaerobic condition. Low sorption coefficients (K d , 1.22 L kg -1 for SDZ and 1.23 L kg -1 for SMX) obtained from Freundlich isotherms experiment indicated that poor sorption of both antibiotics may pose a high risk to environment due to their high mobility and possibility of entering surface and ground water. Degradation occurred at a lower rate under the anaerobic environment, where both two antibiotics had higher persistence in sterile and non-sterile soils with degradation ratio  20 d. Additionally, the addition of manure slightly increased degradation rates of SDZ and SMX, but there were no significant differences between single and repeated manure application at a later stage (p > 0.05), which suggested that the degradation was affected by both biotic and abiotic factors. Degradation rates would be slower at a higher concentration, indicating that degradation kinetics of SDZ and SMX were dependent on initial concentrations. During the degradation period, the antibiotics removal may change temperature, pH, sulfate and nitrate in soil, which suggested that the variation of antibiotics concentrations was related to the changes of soil physicochemical properties. An equation was proposed to elucidate the link between adsorption and degradation under different conditions, and to predict potential environmental risks of antibiotics. Copyright © 2017 Elsevier Ltd. All rights reserved.

Effect of charcoal amendment on adsorption, leaching and degradation of isoproturon in soils

Science.gov (United States)

Si, Youbin; Wang, Midao; Tian, Chao; Zhou, Jing; Zhou, Dongmei

2011-04-01

The effects of charcoal amendment on adsorption, leaching and degradation of the herbicide isoproturon in soils were studied under laboratory conditions. The adsorption data all fitted well with the Freundlich empirical equation. It was found that the adsorption of isoproturon in soils increased with the rate of charcoal amended (correlation coefficient r = 0.957 **, P isoproturon in leachate decreased with the increase of the amount of charcoal addition to soil column, while the retention of isoproturon in soils increased with an increase in the charcoal content of soil samples. Biodegradation was still the most significant mechanism for isoproturon dissipation from soil. Charcoal amendment greatly reduced the biodegradation of isoproturon in soils. The half-lives of isoproturon degradation ( DT50) in soils greatly extended when the rate of added charcoal inceased from 0 to 50 g kg - 1 (for Paddy soil, DT50 values increased from 54.6 to 71.4 days; for Alfisol, DT50 from 16.0 to 136 days; and for Vertisol, DT50 from 15.2 to 107 days). The degradation rate of isoproturon in soils was significantly negatively correlated with the amount of added charcoal. This research suggests that charcoal amendment may be an effective management practice for reducing pesticide leaching and enhancing its persistence in soils.

Bacterial diversity exploration in hydrocarbon polluted soil: metabolic potential and degrader community evolution revealed by isotope labeling

International Nuclear Information System (INIS)

Martin, F.

2011-01-01

Polycyclic aromatic hydrocarbons (PAHs) are ubiquitous compounds produced by incomplete combustion of organic matter. They are a source of environmental pollution, especially associated to oil product exploitation, and represent a threat for living organisms including human beings because of their toxicity. Many bacteria capable of degrading PAHs have been isolated and studied. However, since less than 5% of soil bacteria can be cultivated in the laboratory, bacterial species able to degrade PAHs in situ have been poorly studied. The first goal of this study was to identify bacteria that degrade PAHs in soil using culture-independent molecular methods. To this end, a strategy known a stable isotope probing has been implemented based on the use of phenanthrene, a three rings PAH, in which the natural isotope of carbon was replaced by 13 C. This molecule has been introduced as a tracer in microcosms containing soil from a constructed wetlands collecting contaminated water from highway runoff. Bacteria having incorporated the 13 C were then identified by 16 S rRNA gene sequence analysis after PCR amplification from labeled genomic DNA extracted from soil. The results show that so far little studied Betaproteobacteria, belonging to the genera Acidovorax, Rhodoferax, Hydrogenophaga and Thiobacillus, as well as Rhodocyclaceae, were the key players in phenanthrene degradation. Predominance of Betaproteobacteries was established thanks to quantitative PCR measurements. A dynamic analysis of bacterial diversity also showed that the community structure of degraders depended on phenanthrene bioavailability. In addition, the phylogenetic diversity of ring-hydroxylating di-oxygenases, enzymes involved in the first step of PAH degradation, has been explored. We detected new sequences, mostly related to di-oxygenases from Sphingomonadales and Burkholderiales. For the first time, we were able to associate a catalytic activity for oxidation of PAHs to partial gene sequences

Dynamic changes in functional gene copy numbers and microbial communities during degradation of pyrene in soils

International Nuclear Information System (INIS)

Peng Jingjing; Cai Chao; Qiao Min; Li Hong; Zhu Yongguan

2010-01-01

This study investigates the dynamics of pyrene degradation rates, microbial communities, and functional gene copy numbers during the incubation of pyrene-spiked soils. Spiking pyrene to the soil was found to have negligible effects on the bacterial community present. Our results demonstrated that there was a significant difference in nidA gene copy numbers between sampling dates in QZ soil. Mycobacterium 16S rDNA clone libraries showed that more than 90% mycobacteria detected were closely related to fast-growing PAH-degrading Mycobacterium in pyrene-spiked soil, while other sequences related to slow-growing Mycobacterium were only detected in the control soil. It is suggested that nidA gene copy number and fast-growing PAH-degrading Mycobacterium could be used as indicators to predict pyrene contamination and its degradation activity in soils. - nidA gene and fast-growing PAH-degrading Mycobacterium can serve as indicators for pyrene contamination.

Degradation of soil cyanide by single and mixed cultures of Pseudomonas stutzeri and Bacillus subtilis.

Science.gov (United States)

Nwokoro, Ogbonnaya; Dibua, Marie Esther Uju

2014-03-01

The aim of this investigation was to study whether certain bacteria could be used for cyanide degradation in soil. The bacteria Pseudomonas stutzeri and Bacillus subtilis were selected based on their good growth in a minimal medium containing 0.8 mg mL-1 potassium cyanide (KCN). In this study we tested their ability to reduce cyanide levels in a medium containing 1.5 mg mL-1 of KCN. Although both microorganisms reduced cyanide levels, Pseudomonas stutzeri was the more effective test organism. Later on, the selected cultures were grown, diluted and their various cell concentrations were used individually and in combination to test their ability of cyanide degradation in soil samples collected around a cassava processing mill. Bacillus subtilis caused degradation of soil cyanide from 0.218 mg g-1 soil immediately with an inoculum concentration of 0.1 (OD600nm) to 0.072 mg g-1 soil after 10 days with an inoculum concentration of 0.6 (OD600nm) implying a 66.9 % reduction. Pseudomonas stutzeri cell concentration of 0.1 (OD600nm) decreased soil cyanide from 0.218 mg g-1 soil initially to 0.061 mg g-1 soil after 10 days with an inoculum concentration of 0.6 (OD600nm) (72 % reduction). The mixed culture of the two bacteria produced the best degradation of soil cyanide from 0.218 mg g-1 soil sample with a combined inoculum concentration of 0.1 (OD600nm) initially to 0.025 mg g-1 soil with a combined inoculum concentration of 0.6 (OD600nm) after 10 days incubation resulting in an 88.5 % degradation of soil cyanide. The analysed bacteria displayed high cyanide degradation potential and may be useful for efficient decontamination of cyanide contaminated sites.

Degradation of 2,4-D in soils by Fe₃O₄ nanoparticles combined with stimulating indigenous microbes.

Science.gov (United States)

Fang, Guodong; Si, Youbin; Tian, Chao; Zhang, Gangya; Zhou, Dongmei

2012-03-01

Degradation of 2,4-dichlorophenoxyacetic acid (2,4-D) in soils by Fe₃O₄ nanoparticles combined with soil indigenous microbes was investigated, and the effects of Fe₃O₄ nanoparticles on soil microbial populations and enzyme activities were also studied. The soils contaminated with 2,4-D were treated with Fe₃O₄ nanoparticles. The microbial populations and enzyme activities were analyzed by dilution plate method and chemical assay, respectively, and the concentration of 2,4-D in soil was determined by high-performance liquid chromatography (HPLC). The results indicated that Fe₃O₄ nanoparticles combined with soil indigenous microbes led to a higher degradation efficiency of 2,4-D than the treatments with Fe₃O₄ nanoparticles or indigenous microbes alone. The degradation of 2,4-D in soils followed the pseudo first-order kinetic. The half-lives of 2,4-D degradation (DT₅₀) of the combined treatments were 0.9, 1.9 and 3.1 days in a Red soil, Vertisol and Alfisol, respectively, which implied that the DT₅₀ of the combination treatments were significantly shorter than that of the treatments Fe₃O₄ nanoparticles or indigenous microbes alone. The effects of Fe₃O₄ nanoparticles on soil microbial populations and enzyme activities were also investigated and compared with the α-Fe₂O₃ nanoparticles. The results suggested that the α-Fe₂O₃ nanoparticles had only comparatively small effects on degradation of 2,4-D in soils, while the Fe₃O₄ nanoparticles not only degraded 2,4-D in soils but also increased the soil microbial populations and enzyme activities; the maximum increase in enzyme activities were 67.8% (amylase), 53.8% (acid phosphatase), 26.5% (catalase) and 38.0% (urease), compared with the untreated soil. Moreover, the introduction of Fe₃O₄ nanoparticles at the different dosage resulted in a variable degradation efficiency of 2,4-D in soil. The method of combining Fe₃O₄ nanoparticles with indigenous soil microbes may

Changes in Flow and Transport Patterns in Fen Peat as a Result of Soil Degradation

Science.gov (United States)

Liu, Haojie; Janssen, Manon; Lennartz, Bernd

2016-04-01

The preferential movement of water and transport of substances play an important role in soils and are not yet fully understood especially in degraded peat soils. In this study, we aimed at deducing changes in flow and transport patterns in the course of soil degradation as resulting from peat drainage, using titanium dioxide (TiO2) as a dye tracer. The dye tracer experiments were conducted on columns of eight types of differently degraded peat soils from three sites taken both in vertical and horizontal directions. The titanium dioxide suspension (average particle size of 0.3 μm; 10 g l-1) was applied in a pulse of 40 mm to each soil core. Twenty-four hours after the application of the tracer, cross sections of the soil cores were prepared for photo documentation. In addition, the saturated hydraulic conductivity (Ks) was determined. Preferential flow occurred in all investigated peat types. From the stained soil structural elements, we concluded that undecomposed plant remains are the major preferential flow pathways in less degraded peat. For more strongly degraded peat, bio-pores, such as root and earthworm channels, operated as the major transport domain. Results show that Ks and the effective pore network in less degraded peat soils are anisotropic. With increasing peat degradation, the Ks and cross section of effective pore network decreased. The results also indicate a strong positive relationship between Ks and number of macropores as well as pore continuity. Hence, we conclude that changes in flow and transport pathways as well as Ks with an increasing peat degradation are due to the disintegration of the peat forming plant material and decrement of number and continuity of macropores after drainage.

Occurrence of Hydrocarbon Degrading Genes in the Soils of the Republic of Tatarstan (Russia)

Science.gov (United States)

Biktasheva, L. R.; Shalyamova, R. P.; Guseva, U. A.; Galitskaya, P. Yu

2018-01-01

Oil pollution is one of the most serious environmental problems nowadays. The ability of soils for self-restoration is important, when choosing the strategy of pollution control. This ability depends on the pull of microbes able to decompose hydrocarbons that were present in the nonpolluted soil prior to pollution. In this study, the occurrence of alkane degrading genes in the soils of the Republic of Tatarstan being one of the oil processing regions in Russia, was investigated. It was found that alkane degrading genes belonging to group I were present in 20 of the 25 soil samples, and their abundances ranged between 0.01 and 0.07%. Alkane degrading genes belonging to group II were not detected in the samples investigated, and those belonging to group III were present in all the samples, and their abundances ranged between 0.06 and 7.25%. No correlation between the alkane degrading gene copy numbers and pH and organic carbon content in soils was revealed.

Use of mycelia as paths for the isolation of contaminant‐degrading bacteria from soil

Science.gov (United States)

Furuno, Shoko; Remer, Rita; Chatzinotas, Antonis; Harms, Hauke; Wick, Lukas Y.

2012-01-01

Summary Mycelia of fungi and soil oomycetes have recently been found to act as effective paths boosting bacterial mobility and bioaccessibility of contaminants in vadose environments. In this study, we demonstrate that mycelia can be used for targeted separation and isolation of contaminant‐degrading bacteria from soil. In a ‘proof of concept’ study we developed a novel approach to isolate bacteria from contaminated soil using mycelia of the soil oomycete Pythium ultimum as translocation networks for bacteria and the polycyclic aromatic hydrocarbon naphthalene (NAPH) as selective carbon source. NAPH‐degrading bacterial isolates were affiliated with the genera Xanthomonas, Rhodococcus and Pseudomonas. Except for Rhodococcus the NAPH‐degrading isolates exhibited significant motility as observed in standard swarming and swimming motility assays. All steps of the isolation procedures were followed by cultivation‐independent terminal 16S rRNA gene terminal fragment length polymorphism (T‐RFLP) analysis. Interestingly, a high similarity (63%) between both the cultivable NAPH‐degrading migrant and the cultivable parent soil bacterial community profiles was observed. This suggests that mycelial networks generally confer mobility to native, contaminant‐degrading soil bacteria. Targeted, mycelia‐based dispersal hence may have high potential for the isolation of bacteria with biotechnologically useful properties. PMID:22014110

Naphthalene and pyrene degradation in contaminated soil as a ...

African Journals Online (AJOL)

The effect of soil particle size distribution and percent organic matter on the degradation rate of naphthalene and pyrene in a water medium of 7.05 ml/min at 27 ± 2oC in a soil reactor was studied. Analysis of the pattern of disappearance of these polycyclic aromatic hydrocarbons (PAHs) using various particle sizes showed ...

Bioremediation of hydrocarbon degradation in a petroleum-contaminated soil and microbial population and activity determination.

Science.gov (United States)

Wu, Manli; Li, Wei; Dick, Warren A; Ye, Xiqiong; Chen, Kaili; Kost, David; Chen, Liming

2017-02-01

Bioremediation of hydrocarbon degradation in petroleum-polluted soil is carried out by various microorganisms. However, little information is available for the relationships between hydrocarbon degradation rates in petroleum-contaminated soil and microbial population and activity in laboratory assay. In a microcosm study, degradation rate and efficiency of total petroleum hydrocarbons (TPH), alkanes, and polycyclic aromatic hydrocarbons (PAH) in a petroleum-contaminated soil were determined using an infrared photometer oil content analyzer and a gas chromatography mass spectrometry (GC-MS). Also, the populations of TPH, alkane, and PAH degraders were enumerated by a modified most probable number (MPN) procedure, and the hydrocarbon degrading activities of these degraders were determined by the Biolog (MT2) MicroPlates assay. Results showed linear correlations between the TPH and alkane degradation rates and the population and activity increases of TPH and alkane degraders, but no correlation was observed between the PAH degradation rates and the PAH population and activity increases. Petroleum hydrocarbon degrading microbial population measured by MPN was significantly correlated with metabolic activity in the Biolog assay. The results suggest that the MPN procedure and the Biolog assay are efficient methods for assessing the rates of TPH and alkane, but not PAH, bioremediation in oil-contaminated soil in laboratory. Copyright © 2016 Elsevier Ltd. All rights reserved.

Screening and identification of p,p¢-DDT degrading soil isolates

Directory of Open Access Journals (Sweden)

Vorasan Sobhon

2008-04-01

Full Text Available DDT is an organochlorine pesticide that can persist in the environment resulting in environmental problem with chronic effects on human and animal health. The determination of p,p¢-DDT in soil samples from 23 agricultural areas in Songkhla Province found DDT residue in the ranges of 0.17-9.84 ng/g soil. After repeated culturing in mineral salts-yeast extract medium (MSYM with an addition of 25 ppm p,p¢-DDT (DDT25, 167 morphologically different bacterial strains were isolated. Out of 167 isolates, only 5 strains showed p,p¢-DDT degrading ability as indicated by clear zone around the colony when grown on nutrient agar supplemented up to 100 ppm p,p¢-DDT. These 5 isolates include SB1A01, SB2A02, SB1A10, SB1A12 and SB1B05. Growth of these isolates in MSYM+DDT25 after 10 days indicated reductions of p,p¢-DDT by 30.5, 20.3, 37.4, 30.4 and 32.2%, respectively. Based on the morphological characteristics and 16S rDNA analysis, isolate SB1A10 which showed the highest degradation ability was found to be 99% identical (1360/1362 to Staphylococcus haemolyticus.

Sorption and degradation of wastewater-associated pharmaceuticals and personal care products in agricultural soils and sediment.

Science.gov (United States)

Zhang, Ting; Wu, Bo; Sun, Na; Ye, Yong; Chen, Huaixia

2013-01-01

Pharmaceuticals and personal care products (PPCPs) have drawn popular concerns recently as an emerging class of aquatic contaminants. In this study, adsorption and degradation of four selected PPCPs, metronidazole, tinidazole, caffeine and chloramphenicol, have been investigated in the laboratory using two agricultural soils in China and sediment from Changjiang River. Adsorption tests using a batch equilibrium method demonstrated that adsorption of all tested chemicals in soils could be well described with Freundlich equation, and their adsorption affinity on soil followed the order of chloramphenicol > caffeine > tinidazole > metronidazole. Generally, higher Kf value was associated with soils which had higher organic matter contents (except for caffeine acid in this study). Degradation of selected PPCPs in soils generally followed first-order exponential decay kinetics, and half-lives ranging from 0.97 to 10.21 d. Sterilization generally decreased the degradation rates, indicating that microbial activity played a significant role in the degradation in soils. The degradation rate constant decreased with increasing initial chemical concentrations in soil, implying that the microbial activity was inhibited with high chemical loading levels.

Evidence for the microbial degradation of imidacloprid in soils of Cameron Highlands

Directory of Open Access Journals (Sweden)

Nasrin Sabourmoghaddam

2015-06-01

Full Text Available Imidacloprid (1-[(6-chloro-3-pyridinylmethyl]-N-nitro-2-imidazolidinimine, with a novel mode of action is a recent systemic and contact insecticide with high activity against a wide range of pests. Continuous dispersion of this pesticide in the environment and its stability in soil results in environmental pollution which demands remediation. The present research was attempted to isolate and characterize imidacloprid degrading bacteria from vegetable farms of Cameron Highlands in Malaysia. The degradation ability of the isolates was tested in minimal salt medium (MSM for a duration of 25 days and the selected strains were characterized based on their biochemical and molecular characteristics. Levels of imidacloprid in MSM medium were analyzed by high performance liquid chromatography (HPLC. Among 50 soil bacterial isolates Bacillus sp., Brevibacterium sp., Pseudomonas putida F1, Bacillus subtilis and Rhizobium sp. were able to degrade 25.36–45.48% of the initial amount of imidacloprid at the concentration of 25 mg L−1 in C limited media. Brevibacterium sp. was isolated from organic farms that had never been exposed to imidacloprid while the other farms had previously been exposed to different levels of imidacloprid. All bacteria introduced in this study were among the first reports of imidacloprid degrading isolates in C limited media from tropical soil. Therefore, the results of this study demonstrate the effectiveness of using soil bacteria for microbial degradation of imidacloprid. These findings suggest that these strains may be promising candidates for bioremediation of imidacloprid-contaminated soils.

Protecting global soil resources for future generations

Science.gov (United States)

Montanarella, Luca

2017-04-01

The latest Status of World's Soil Resources report has highlighted that soils are increasingly under pressure by numerous human induced degradation processes in most parts of the world. The limits of our planetary boundaries concerning vital soil resources have been reached and without reversing this negative trend there will be a serious lack of necessary soil resources for future generations. It has been therefore of the highest importance to include soils within some of the Sustainable Development Goals (SDG) recently approved by the United Nations. Sustainable development can not be achieved without protecting the limited, non-renewable, soil resources of our planet. There is the need to limit on-going soil degradation processes and to implement extensive soil restoration activities in order to strive towards a land degradation neutral (LDN) world, as called upon by SDG 15. Sustainable soil management needs to be placed at the core of any LDN strategy and therefore it is of highest importance that the recently approved Voluntary Guidelines for Sustainable Soil Management (VGSSM) of FAO get fully implemented at National and local scale.Sustainable soil management is not only relevant for the protection of fertile soils for food production, but also to mitigate and adopt to climate change at to preserve the large soil biodiversity pool. Therefore the VGSSM are not only relevant to FAO, but also the the climate change convention (UNFCCC) and the biodiversity convention (CBD). An integrated assessment of the current land degradation processes and the available land restoration practices is needed in order to fully evaluate the potential for effectively achieving LDN by 2030. The on-going Land Degradation and Restoration Assessment (LDRA) of the Intergovernmental Platform for Biodiversity and Ecosystem Services (IPBES) will provide the necessary scientific basis for the full implementation of the necessary measures for achieving the planned SGS's relevant to land

Degradation of polycyclic aromatic hydrocarbons by microbial consortia enriched from three soils using two different culture media

International Nuclear Information System (INIS)

Wu, Manli; Chen, Liming; Tian, Yongqiang; Ding, Yi; Dick, Warren A.

2013-01-01

A consortium composed of many different bacterial species is required to efficiently degrade polycyclic aromatic hydrocarbons (PAH) in oil-contaminated soil. We obtained six PAH-degrading microbial consortia from three oil-contaminated soils using two different isolation culture media. Denaturing gradient gel electrophoresis (DGGE) and sequence analyses of amplified 16s rRNA genes confirmed the bacterial community was greatly affected by both the culture medium and the soil from which the consortia were enriched. Three bacterial consortia enriched using malt yeast extract (MYE) medium showed higher degradation rates of PAHs than consortia enriched using Luria broth (LB) medium. Consortia obtained from a soil and then added back to that same soil was more effective in degrading PAHs than adding, to the same soil, consortia isolated from other, unrelated soils. This suggests that inoculum used for bioremediation should be from the same, or very similar nearby soils, as the soil that is actually being bioremediated. -- Highlights: •Six PAH-degrading microbial consortia were isolated from three oil-contaminated soils. •The bacterial community by 16s rRNA genes was affected by culture media and source soil. •Inoculum should be from the same or similar soil as the soil being bioremediated. -- Bioremediation of oil-contaminated soils was most effective when using inoculum of microbial consortia from the same or similar soil as the soil being bioremediated

Isolation and Characterization of Phenanthrene Degrading Bacteria from Diesel Fuel-Contaminated Antarctic Soils

Directory of Open Access Journals (Sweden)

Alejandro Gran-Scheuch

2017-08-01

Full Text Available Antarctica is an attractive target for human exploration and scientific investigation, however the negative effects of human activity on this continent are long lasting and can have serious consequences on the native ecosystem. Various areas of Antarctica have been contaminated with diesel fuel, which contains harmful compounds such as heavy metals and polycyclic aromatic hydrocarbons (PAH. Bioremediation of PAHs by the activity of microorganisms is an ecological, economical, and safe decontamination approach. Since the introduction of foreign organisms into the Antarctica is prohibited, it is key to discover native bacteria that can be used for diesel bioremediation. By following the degradation of the PAH phenanthrene, we isolated 53 PAH metabolizing bacteria from diesel contaminated Antarctic soil samples, with three of these isolates exhibiting a high phenanthrene degrading capacity. In particular, the Sphingobium xenophagum D43FB isolate showed the highest phenanthrene degradation ability, generating up to 95% degradation of initial phenanthrene. D43FB can also degrade phenanthrene in the presence of its usual co-pollutant, the heavy metal cadmium, and showed the ability to grow using diesel-fuel as a sole carbon source. Microtiter plate assays and SEM analysis revealed that S. xenophagum D43FB exhibits the ability to form biofilms and can directly adhere to phenanthrene crystals. Genome sequencing analysis also revealed the presence of several genes involved in PAH degradation and heavy metal resistance in the D43FB genome. Altogether, these results demonstrate that S. xenophagum D43FB shows promising potential for its application in the bioremediation of diesel fuel contaminated-Antarctic ecosystems.

Crude oil degradation potential of bacteria isolated from oil-polluted soil and animal wastes in soil amended with animal wastes

Directory of Open Access Journals (Sweden)

Voke O. Urhibo

2017-03-01

Full Text Available The influence of animal wastes on crude oil degradation potential of strains of Proteus vulgaris and Bacillus subtilis isolated from animal wastes (poultry and pig droppings and petroleum-polluted soil was compared in laboratory studies. Both bacterial strains were selected for high crude oil degradation ability after screening many isolates by the 2,6-dichlorophenol indophenol method. Analyses by gas chromatography (GC showed that degradation of crude oil was markedly enhanced (88.3–97.3% vs 72.1–78.8% in soil amended with animal wastes as indicated by the reduction of total petroleum hydrocarbon (TPH. TPH reduction by animal waste bacterial strains in animal waste-amended soil was more than the reduction by strains from soil contaminated with petroleum (P < 0.001. The greatest reduction of TPH (96.6–97.3% vs 80.4–95.9% was by poultry waste strains and it occurred in soil amended with poultry waste. GC analyses of n-alkanes showed that although shorter chains were preferentially degraded [32.0–78.5% (C8–23 vs 6.3–18.5% (C24–36] in normal soil, biodegradation of longer chains increased to 38.4–46.3% in animal waste-amended soil inoculated with the same animal wastes’ strains. The results indicate that these animal waste strains may be of potential application for bioremediation of oil-polluted soil in the presence of the wastes from where they were isolated.

Indicators and degradation mechanisam of loess soil

Directory of Open Access Journals (Sweden)

Gajić Grozdana

2016-01-01

Full Text Available Studies that are presented in this paper were carried out to define the formation criteria of loess soil degradation. Erosion stability analysis of this soil type will be carried out on the basis of its physical and mechanical characteristics. To describe the established relationships between the individual parameters of loess soil, the study uses mathematical model, that is based on experimentally obtained results of soils’ physical and mechanical characteristics, From the presented results of geotechnical tests, mathematical models and functional relations between water regime and loess soils’ resistant characteristics; indicators of internal erosion were defined as well as the mechanism of this process. Effects of the practical application of found results are also analyzed in this paper.

Effect of sunlight irradiation on photocatalytic pyrene degradation in contaminated soils by micro-nano size TiO2

International Nuclear Information System (INIS)

Chang Chien, S.W.; Chang, C.H.; Chen, S.H.; Wang, M.C.; Madhava Rao, M.; Satya Veni, S.

2011-01-01

The enhanced catalytic pyrene degradation in quartz sand and alluvial and red soils by micro-nano size TiO 2 in the presence and absence of sunlight was investigated. The results showed that the synergistic effect of sunlight irradiation and TiO 2 was more efficient on pyrene degradation in quartz sand and red and alluvial soils than the corresponding reaction system without sunlight irradiation. In the presence of sunlight irradiation, the photooxidation (without TiO 2 ) of pyrene was very pronounced in alluvial and red soils and especially in quartz sand. However, in the absence of sunlight irradiation, the catalytic pyrene degradation by TiO 2 and the photooxidation (without TiO 2 ) of pyrene were almost nil. This implicates that ultra-violet (UV) wavelength range of sunlight plays an important role in TiO 2 -enhanced photocatalytic pyrene degradation and in photooxidation (without TiO 2 ) of pyrene. The percentages of photocatalytic pyrene degradation by TiO 2 in quartz sand, alluvial and red soils under sunlight irradiation were 78.3, 23.4, and 31.8%, respectively, at 5 h reaction period with a 5% (w/w) dose of the amended catalyst. The sequence of TiO 2 -enhanced catalytic pyrene degradation in quartz sand and alluvial and red soils was quartz sand > red soil > alluvial soil, due to different texture and total organic carbon (TOC) contents of the quartz sand and other two soils. The differential Fourier transform infrared (FT-IR) spectra of degraded pyrene in alluvial soil corroborate that TiO 2 -enhanced photocatalytic degradation rate of degraded pyrene was much greater than photooxidation (without TiO 2 ) rate of degraded pyrene. Based on the data obtained, the importance for the application of TiO 2 -enhanced photocatalytic pyrene degradation and associated organic contaminants in contaminated soils was elucidated. - Highlights: → Synergistic effect of sunlight irradiation and TiO 2 promoted degradation of pyrene. → Micro-nano size TiO 2 enhanced

Fate of CL-20 in sandy soils: Degradation products as potential markers of natural attenuation

International Nuclear Information System (INIS)

Monteil-Rivera, Fanny; Halasz, Annamaria; Manno, Dominic; Kuperman, Roman G.; Thiboutot, Sonia; Ampleman, Guy; Hawari, Jalal

2009-01-01

Hexanitrohexaazaisowurtzitane (CL-20) is an emerging explosive that may replace the currently used explosives such as RDX and HMX, but little is known about its fate in soil. The present study was conducted to determine degradation products of CL-20 in two sandy soils under abiotic and biotic anaerobic conditions. Biotic degradation was prevalent in the slightly acidic VT soil, which contained a greater organic C content, while the slightly alkaline SAC soil favored hydrolysis. CL-20 degradation was accompanied by the formation of formate, glyoxal, nitrite, ammonium, and nitrous oxide. Biotic degradation of CL-20 occurred through the formation of its denitrohydrogenated derivative (m/z 393 Da) while hydrolysis occurred through the formation of a ring cleavage product (m/z 156 Da) that was tentatively identified as CH 2 =N-C(=N-NO 2 )-CH=N-CHO or its isomer N(NO 2 )=CH-CH=N-CO-CH=NH. Due to their chemical specificity, these two intermediates may be considered as markers of in situ attenuation of CL-20 in soil. - Two key intermediates of CL-20 degradation are potential markers of its natural attenuation in soil

Exploration of Hydrocarbon Degrading Bacteria on Soils Contaminated by Crude Oil From South Sumatera

OpenAIRE

Napoleon, A; Probowati, D S

2014-01-01

The goal of this research was to explore hydrocarbon degrading bacteria on crude oil contaminated soil with potential to degrade hydrocarbon in oil pollutant. The research started by early August 2013 till January 2014. Soil sampling for this research was taken on several places with contaminated soil location such as Benakat, Rimau, and Pengabuan all of it located in South Sumatera. Conclusion from this research Isolates obtained from three (3) sites of contaminated soil and treated using SB...

Role of litter turnover in soil quality in tropical degraded lands of Colombia.

Science.gov (United States)

León, Juan D; Osorio, Nelson W

2014-01-01

Land degradation is the result of soil mismanagement that reduces soil productivity and environmental services. An alternative to improve degraded soils through reactivation of biogeochemical nutrient cycles (via litter production and decomposition) is the establishment of active restoration models using new forestry plantations, agroforestry, and silvopastoral systems. On the other hand, passive models of restoration consist of promoting natural successional processes with native plants. The objective in this review is to discuss the role of litter production and decomposition as a key strategy to reactivate biogeochemical nutrient cycles and thus improve soil quality in degraded land of the tropics. For this purpose the results of different projects of land restoration in Colombia are presented based on the dynamics of litter production, nutrient content, and decomposition. The results indicate that in only 6-13 years it is possible to detect soil properties improvements due to litter fall and decomposition. Despite that, low soil nutrient availability, particularly of N and P, seems to be major constraint to reclamation of these fragile ecosystems.

Soil erosion and degradation in Mediterranean Type Ecosystems. The Soil Erosion and Degradation Research Group (SEDER) approach and findings

Science.gov (United States)

Cerdà, Artemi; Keesstra, Saskia; Pulido, Manuel; Jordán, Antonio; Novara, Agata; Giménez-Morera, Antonio; Borja, Manuel Esteban Lucas; Francisco Martínez-Murillo, Juan; Rodrigo-Comino, Jesús; Pereira, Paulo; Nadal-Romero, Estela; Taguas, Tani; Úbeda, Xavier; Brevik, Eric C.; Tarolli, Paolo; Bagarello, Vicenzo; Parras Alcantara, Luis; Muñoz-Rojas, Miriam; Oliva, Marc; di Prima, Simone

2017-04-01

The Soil Erosion and Degradation Reseach Group (SEDER) is developing a research program since 2002 to assess the soil erosion and degradation processes at the Canyoles River watershed in Eastern Spain. The research study site was selected as representative of the environmental changes that take place in the Mediterranean: abandonment of the agriculture land in the mountains, forest fire expansion, intensification of the agriculture, impact of the infraesturctures such as rail and road embankments, and soil sealing due to the urban expansion. The research is based on the continuous measurements in the Montesa and El Teularet research stations and the sampling of the soils, topographical measurements and the use of rainfall simulators, minidisk infiltrometers, ring infiltrometers and Water Drop Penetration Time tests. The research is moving from a pure scientific approach to a more socio-economic view, and the stakeholders are being researched from a perception point of view. SEDER is also moving from pure to applied science, with the objective to design new managements that will satisfy the stakeholders and will achieve the sustainability. The research is being carried out in vineyards and orchards as they show extremely high erosion rates. But also we are interested in the impact of forest fires and the road embankments. In all three research topics, SEDER wish to find the sustainable managements. Acknowledgements The research leading to these results has received funding from the European Union Seventh Framework Programme (FP7/2007-2013) under grant agreement n° 603498 (RECARE project) and the CGL2013- 47862-C2-1-R and CGL2016-75178-C2-2-R national research projects. References Bodí, M. B., Martin, D. A., Balfour, V. N., Santín, C., Doerr, S. H., Pereira, P., . . . Mataix-Solera, J. (2014). Corrigendum to "wildland fire ash: Production, composition and eco-hydro-geomorphic effects", earth sci. rev. 130 (2014) [103-127]. Earth-Science Reviews, 138, 503. doi:10

Pasture degradation modifies soil organic matter properties and biochemical functioning in Tibetan grasslands

Science.gov (United States)

Spielvogel, Sandra; Steingräber, Laura; Schleuß, Per; Kuzyakov, Yakov; Guggenberger, Georg

2015-04-01

Kobresia pastures of the Tibetan Plateau represent the world's largest alpine ecosystem. Moderate husbandry on Kobresia pastures is beneficial for the storage of soil organic carbon (OC), nitrogen (N) and other nutrients and prevents erosion by establishment of sedge-turf root mats with high OC allocation rates below ground. However, undisturbed root mats are affected by freezing and thawing processes, which cause initial ice cracks. As a consequence decomposition of root mat layers will be accelerated and current sedentarization programs with concomitant increased grazing intensity may additionally enhance root mat degradation. Finally, cracks are enlarged by water and wind erosion as well as pika activities until bare soil surface areas without root mat horizons occur. The aim of this study was to understand the impact of the root mat layer on soil organic carbon stabilization and microbial functioning depending on soil depths and to predict future changes (OC, N and nutrient losses, soil microbial functioning in SOM transformation) by overgrazing and climate change. We investigated the mineral soil below Kobresia root mats along a false time degradation sequence ranging from stage 1 (intact root mat) to stage 4 (mats with large cracks and bare soil patches). Vertical gradients of δ13C values, neutral sugar, cutin and suberin contents as well as microbial biomass estimated by total phospholipid fatty acid (PLFA), microbial community composition (PLFA profiles) and activities of six extracellular enzymes involved in the C, N, and P cycle were assessed. Soil OC and N contents as well as C/N ratios indicate an increasing illuviation of topsoil material into the subsoil with advancing root mat degradation. This was confirmed by more negative δ13C values as well as significantly (p ≤ 0.05) increasing contributions of cutin derived hydroxy fatty acids to OC in the subsoils from degradation stages 1 to 4. PLFA profiles were surprisingly similar in the subsoils of

[Assessment of soil degradation in regions of nuclear power explosions at Semipalatinsk Nuclear Test Site].

Science.gov (United States)

Evseeva, T I; Geras'kin, S A; Maĭstrenko, T A; Belykh, E S

2011-01-01

Degree of the soil cover degradation at the "Balapan" and "Experimental field" test sites was assessed based on Allium-test of soil toxicity results and international guidelines on radioactive restriction of solid materials (IAEA, 2004) and environment (Smith, 2005). Soil cover degradation maps of large-scale (1 : 25000) were made. The main part of the area mapped belongs to high-contaminated toxic degraded soil. A relationship between the soil toxicity and the total radionuclide activity concentrations was found to be described by power functions. When the calculated value (equal to 413-415 Bq/kg of air dry soil) increases, the soil becomes toxic for plants. This value is 7.8 times higher than the maximal value for background territories (53 Bq/kg) surrounding SNTS. Russian sanitary and hygienic guidelines (Radiation safety norms, 2009; Sanitary regulations of radioactive waste management, 2003) underestimate the degree of soil radioactive contamination for plants.

Soil Degradation, Policy Intervention and Sustainable Agricultural Growth

NARCIS (Netherlands)

Sasmal, J.; Weikard, H.P.

2013-01-01

Sustainable agricultural growth in developing countries is jeopardized by soil degradation consequent upon intensive cultivation and use of increasing doses of chemical inputs. To pave the way to sustainable agricultural growth we develop a model that incorporates organic fertilizer into the

Degradation of Human PDZ-Proteins by Human Alphapapillomaviruses Represents an Evolutionary Adaptation to a Novel Cellular Niche

Science.gov (United States)

Van Doorslaer, Koenraad; DeSalle, Rob; Einstein, Mark H.; Burk, Robert D.

2015-01-01

In order to complete their life cycle, papillomaviruses have evolved to manipulate a plethora of cellular pathways. The products of the human Alphapapillomavirus E6 proteins specifically interact with and target PDZ containing proteins for degradation. This viral phenotype has been suggested to play a role in viral oncogenesis. To analyze the association of HPV E6 mediated PDZ-protein degradation with cervical oncogenesis, a high-throughput cell culture assay was developed. Degradation of an epitope tagged human MAGI1 isoform was visualized by immunoblot. The correlation between HPV E6-induced degradation of hMAGI1 and epidemiologically determined HPV oncogenicity was evaluated using a Bayesian approach within a phylogenetic context. All tested oncogenic types degraded the PDZ-containing protein hMAGI1d; however, E6 proteins isolated from several related albeit non-oncogenic viral types were equally efficient at degrading hMAGI1. The relationship between both traits (oncogenicity and PDZ degradation potential) is best explained by a model in which the potential to degrade PDZ proteins was acquired prior to the oncogenic phenotype. This analysis provides evidence that the ancestor of both oncogenic and non-oncogenic HPVs acquired the potential to degrade human PDZ-containing proteins. This suggests that HPV E6 directed degradation of PDZ-proteins represents an ancient ecological niche adaptation. Phylogenetic modeling indicates that this phenotype is not specifically correlated with oncogenic risk, but may act as an enabling phenotype. The role of PDZ protein degradation in HPV fitness and oncogenesis needs to be interpreted in the context of Alphapapillomavirus evolution. PMID:26086730

Degradation of Human PDZ-Proteins by Human Alphapapillomaviruses Represents an Evolutionary Adaptation to a Novel Cellular Niche.

Directory of Open Access Journals (Sweden)

Koenraad Van Doorslaer

2015-06-01

Full Text Available In order to complete their life cycle, papillomaviruses have evolved to manipulate a plethora of cellular pathways. The products of the human Alphapapillomavirus E6 proteins specifically interact with and target PDZ containing proteins for degradation. This viral phenotype has been suggested to play a role in viral oncogenesis. To analyze the association of HPV E6 mediated PDZ-protein degradation with cervical oncogenesis, a high-throughput cell culture assay was developed. Degradation of an epitope tagged human MAGI1 isoform was visualized by immunoblot. The correlation between HPV E6-induced degradation of hMAGI1 and epidemiologically determined HPV oncogenicity was evaluated using a Bayesian approach within a phylogenetic context. All tested oncogenic types degraded the PDZ-containing protein hMAGI1d; however, E6 proteins isolated from several related albeit non-oncogenic viral types were equally efficient at degrading hMAGI1. The relationship between both traits (oncogenicity and PDZ degradation potential is best explained by a model in which the potential to degrade PDZ proteins was acquired prior to the oncogenic phenotype. This analysis provides evidence that the ancestor of both oncogenic and non-oncogenic HPVs acquired the potential to degrade human PDZ-containing proteins. This suggests that HPV E6 directed degradation of PDZ-proteins represents an ancient ecological niche adaptation. Phylogenetic modeling indicates that this phenotype is not specifically correlated with oncogenic risk, but may act as an enabling phenotype. The role of PDZ protein degradation in HPV fitness and oncogenesis needs to be interpreted in the context of Alphapapillomavirus evolution.

Degradation of Human PDZ-Proteins by Human Alphapapillomaviruses Represents an Evolutionary Adaptation to a Novel Cellular Niche.

Science.gov (United States)

Van Doorslaer, Koenraad; DeSalle, Rob; Einstein, Mark H; Burk, Robert D

2015-06-01

In order to complete their life cycle, papillomaviruses have evolved to manipulate a plethora of cellular pathways. The products of the human Alphapapillomavirus E6 proteins specifically interact with and target PDZ containing proteins for degradation. This viral phenotype has been suggested to play a role in viral oncogenesis. To analyze the association of HPV E6 mediated PDZ-protein degradation with cervical oncogenesis, a high-throughput cell culture assay was developed. Degradation of an epitope tagged human MAGI1 isoform was visualized by immunoblot. The correlation between HPV E6-induced degradation of hMAGI1 and epidemiologically determined HPV oncogenicity was evaluated using a Bayesian approach within a phylogenetic context. All tested oncogenic types degraded the PDZ-containing protein hMAGI1d; however, E6 proteins isolated from several related albeit non-oncogenic viral types were equally efficient at degrading hMAGI1. The relationship between both traits (oncogenicity and PDZ degradation potential) is best explained by a model in which the potential to degrade PDZ proteins was acquired prior to the oncogenic phenotype. This analysis provides evidence that the ancestor of both oncogenic and non-oncogenic HPVs acquired the potential to degrade human PDZ-containing proteins. This suggests that HPV E6 directed degradation of PDZ-proteins represents an ancient ecological niche adaptation. Phylogenetic modeling indicates that this phenotype is not specifically correlated with oncogenic risk, but may act as an enabling phenotype. The role of PDZ protein degradation in HPV fitness and oncogenesis needs to be interpreted in the context of Alphapapillomavirus evolution.

Impact of electrochemical treatment of soil washing solution on PAH degradation efficiency and soil respirometry

International Nuclear Information System (INIS)

Mousset, Emmanuel; Huguenot, David; Hullebusch, Eric D. van; Oturan, Nihal; Guibaud, Gilles; Esposito, Giovanni; Oturan, Mehmet A.

2016-01-01

The remediation of a genuinely PAH-contaminated soil was performed, for the first time, through a new and complete investigation, including PAH extraction followed by advanced oxidation treatment of the washing solution and its recirculation, and an analysis of the impact of the PAH extraction on soil respirometry. The study has been performed on the remediation of genuine PAH-contaminated soil, in the following three steps: (i) PAH extraction with soil washing (SW) techniques, (ii) PAH degradation with an electro-Fenton (EF) process, and (iii) recirculation of the partially oxidized effluent for another SW cycle. The following criteria were monitored during the successive washing cycles: PAH extraction efficiency, PAH oxidation rates and yields, extracting agent recovery, soil microbial activity, and pH of soil. Two representative extracting agents were compared: hydroxypropyl-beta-cyclodextrin (HPCD) and a non-ionic surfactant, Tween"® 80. Six PAH with different numbers of rings were monitored: acenaphthene (ACE), phenanthrene (PHE), fluoranthene (FLA), pyrene (PYR), benzo(a)pyrene (BaP), and benzo(g,h,i)perylene (BghiP). Tween"® 80 showed much better PAH extraction efficiency (after several SW cycles) than HPCD, regardless of the number of washing cycles. Based on successive SW experiments, a new mathematical relation taking into account the soil/water partition coefficient (Kd*) was established, and could predict the amount of each PAH extracted by the surfactant with a good correlation with experimental results (R"2 > 0.975). More HPCD was recovered (89%) than Tween"® 80 (79%), while the monitored pollutants were completely degraded (>99%) after 4 h and 8 h, respectively. Even after being washed with partially oxidized solutions, the Tween"® 80 solutions extracted significantly more PAH than HPCD and promoted better soil microbial activity, with higher oxygen consumption rates. Moreover, neither the oxidation by-products nor the acidic media (p

Liming effect in the degradation of 14C-glyphosate in soils

International Nuclear Information System (INIS)

Arantes, Sayonara A.C.M.; Lavorenti, Arquimedes

2007-01-01

Liming is soil fertility management practice essential in tropical soils, in general extremely acidic. This practice, by influencing physical, chemical and biological features of soils may influence the behavior of organic molecules in soils. The glyphosate is one the most widely used pesticides in Brazil in several cultures to pest management control. Studies on its fate in soil are still incipient, mainly under the effect of liming practice The objective of the present study was to verify the effect of liming practice in the degradation of glyphosate in Red Latosol (LE) and Quartzarenic Neosol (RQ) soils and also in the microbial activity of the same soils. The experiment was conducted in a completely randomized design in a 2 x 2 factorial scheme, corresponding to two soils and two management conditions (with liming and without liming), with four replicates. The Radiometric technique was utilized to evaluate the evolution the 14 CO 2 at intervals of 7 days, during 70 days. The study of microbial activity was conducted parallel to the degradation experiment, using the methodology of radiolabelled glucose ( 14 C-glucose), which was measured at intervals of fourteen days, during 70 days. The results showed that in the studied soils, the liming increased the 14 C-glyphosate mineralization and the microbial activity. (author)

Soil bacteria showing a potential of chlorpyrifos degradation and plant growth enhancement

Directory of Open Access Journals (Sweden)

Shamsa Akbar

Full Text Available ABSTRACT Background: Since 1960s, the organophosphate pesticide chlorpyrifos has been widely used for the purpose of pest control. However, given its persistence and toxicity towards life forms, the elimination of chlorpyrifos from contaminated sites has become an urgent issue. For this process bioremediation is the method of choice. Results: Two bacterial strains, JCp4 and FCp1, exhibiting chlorpyrifos-degradation potential were isolated from pesticide contaminated agricultural fields. These isolates were able to degrade 84.4% and 78.6% of the initial concentration of chlorpyrifos (100 mg L-1 within a period of only 10 days. Based on 16S rRNA sequence analysis, these strains were identified as Achromobacter xylosoxidans (JCp4 and Ochrobactrum sp. (FCp1. These strains exhibited the ability to degrade chlorpyrifos in sterilized as well as non-sterilized soils, and were able to degrade 93-100% of the input concentration (200 mg kg-1 within 42 days. The rate of degradation in inoculated soils ranged from 4.40 to 4.76 mg-1 kg-1 d-1 with rate constants varying between 0.047 and 0.069 d-1. These strains also displayed substantial plant growth promoting traits such as phosphate solubilization, indole acetic acid production and ammonia production both in absence as well as in the presence of chlorpyrifos. However, presence of chlorpyrifos (100 and 200 mg L-1 was found to have a negative effect on indole acetic acid production and phosphate solubilization with percentage reduction values ranging between 2.65-10.6% and 4.5-17.6%, respectively. Plant growth experiment demonstrated that chlorpyrifos has a negative effect on plant growth and causes a decrease in parameters such as percentage germination, plant height and biomass. Inoculation of soil with chlorpyrifos-degrading strains was found to enhance plant growth significantly in terms of plant length and weight. Moreover, it was noted that these strains degraded chlorpyrifos at an increased rate (5

Soil bacteria showing a potential of chlorpyrifos degradation and plant growth enhancement.

Science.gov (United States)

Akbar, Shamsa; Sultan, Sikander

2016-01-01

Since 1960s, the organophosphate pesticide chlorpyrifos has been widely used for the purpose of pest control. However, given its persistence and toxicity towards life forms, the elimination of chlorpyrifos from contaminated sites has become an urgent issue. For this process bioremediation is the method of choice. Two bacterial strains, JCp4 and FCp1, exhibiting chlorpyrifos-degradation potential were isolated from pesticide contaminated agricultural fields. These isolates were able to degrade 84.4% and 78.6% of the initial concentration of chlorpyrifos (100mgL(-1)) within a period of only 10 days. Based on 16S rRNA sequence analysis, these strains were identified as Achromobacter xylosoxidans (JCp4) and Ochrobactrum sp. (FCp1). These strains exhibited the ability to degrade chlorpyrifos in sterilized as well as non-sterilized soils, and were able to degrade 93-100% of the input concentration (200mgkg(-1)) within 42 days. The rate of degradation in inoculated soils ranged from 4.40 to 4.76mg(-1)kg(-1)d(-1) with rate constants varying between 0.047 and 0.069d(-1). These strains also displayed substantial plant growth promoting traits such as phosphate solubilization, indole acetic acid production and ammonia production both in absence as well as in the presence of chlorpyrifos. However, presence of chlorpyrifos (100 and 200mgL(-1)) was found to have a negative effect on indole acetic acid production and phosphate solubilization with percentage reduction values ranging between 2.65-10.6% and 4.5-17.6%, respectively. Plant growth experiment demonstrated that chlorpyrifos has a negative effect on plant growth and causes a decrease in parameters such as percentage germination, plant height and biomass. Inoculation of soil with chlorpyrifos-degrading strains was found to enhance plant growth significantly in terms of plant length and weight. Moreover, it was noted that these strains degraded chlorpyrifos at an increased rate (5.69mg(-1)kg(-1)d(-1)) in planted soil. The

Passive warming effect on soil microbial community and humic substance degradation in maritime Antarctic region.

Science.gov (United States)

Kim, Dockyu; Park, Ha Ju; Kim, Jung Ho; Youn, Ui Joung; Yang, Yung Hun; Casanova-Katny, Angélica; Vargas, Cristina Muñoz; Venegas, Erick Zagal; Park, Hyun; Hong, Soon Gyu

2018-06-01

Although the maritime Antarctic has undergone rapid warming, the effects on indigenous soil-inhabiting microorganisms are not well known. Passive warming experiments using open-top chamber (OTC) have been performed on the Fildes Peninsula in the maritime Antarctic since 2008. When the soil temperature was measured at a depth of 2-5 cm during the 2013-2015 summer seasons, the mean temperature inside OTC (OTC-In) increased by approximately 0.8 °C compared with outside OTC (OTC-Out), while soil chemical and physical characteristics did not change. Soils (2015 summer) from OTC-In and OTC-Out were subjected to analysis for change in microbial community and degradation rate of humic substances (HS, the largest pool of recalcitrant organic carbon in soil). Archaeal and bacterial communities in OTC-In were minimally affected by warming compared with those in OTC-Out, with archaeal methanogenic Thermoplasmata slightly increased in abundance. The abundance of heterotrophic fungi Ascomycota was significantly altered in OTC-In. Total bacterial and fungal biomass in OTC-In increased by 20% compared to OTC-Out, indicating that this may be due to increased microbial degradation activity for soil organic matter (SOM) including HS, which would result in the release of more low-molecular-weight growth substrates from SOM. Despite the effects of warming on the microbial community over the 8-years-experiments warming did not induce any detectable change in content or structure of polymeric HS. These results suggest that increased temperature may have significant and direct effects on soil microbial communities inhabiting maritime Antarctic and that soil microbes would subsequently provide more available carbon sources for other indigenous microbes. © 2018 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Effects of traditional land transactions on soil erosion and land degradation

OpenAIRE

Leduka, R.C.

1998-01-01

A research report on the effects of traditional land transactions on soil erosion and land degradation in Lesotho. This report focuses on the land transactions in Lesotho and how these transaction affect the growing erosion rates of the soil.

Degradation of polycyclic aromatic hydrocarbons by microbial consortia enriched from three soils using two different culture media.

Science.gov (United States)

Wu, Manli; Chen, Liming; Tian, Yongqiang; Ding, Yi; Dick, Warren A

2013-07-01

A consortium composed of many different bacterial species is required to efficiently degrade polycyclic aromatic hydrocarbons (PAH) in oil-contaminated soil. We obtained six PAH-degrading microbial consortia from three oil-contaminated soils using two different isolation culture media. Denaturing gradient gel electrophoresis (DGGE) and sequence analyses of amplified 16s rRNA genes confirmed the bacterial community was greatly affected by both the culture medium and the soil from which the consortia were enriched. Three bacterial consortia enriched using malt yeast extract (MYE) medium showed higher degradation rates of PAHs than consortia enriched using Luria broth (LB) medium. Consortia obtained from a soil and then added back to that same soil was more effective in degrading PAHs than adding, to the same soil, consortia isolated from other, unrelated soils. This suggests that inoculum used for bioremediation should be from the same, or very similar nearby soils, as the soil that is actually being bioremediated. Copyright © 2013 Elsevier Ltd. All rights reserved.

Mineral induced mechanochemical degradation: the imazaquin case.

Science.gov (United States)

Nasser, Ahmed; Buchanovsky, Nadia; Gerstl, Zev; Mingelgrin, Uri

2009-03-01

The potential role of mechanochemical processes in enhancing degradation of imazaquin by soil components is demonstrated. The investigated components include montmorillonite saturated with Na(+), Ca(2+), Cu(2+)and Al(3+), Agsorb (a commercial clay mix), birnessite and hematite. The mechanical force applied was manual grinding of mixtures of imazaquin and the minerals, using mortar and pestle. The degradation rates of imazaquin in these mixtures were examined as a function of the following parameters: time of grinding, herbicide load (3.9, 8.9, 16.7 and 26.6 mg imazaquin per g mineral), temperature (10, 25, 40 and 70 degrees C), acidic/basic conditions, and dry or wet grinding. Dry grinding of imazaquin for 5 min with Al-montmorillonite or with hematite resulted in 56% and 71% degradation of the imazaquin, respectively. Wet grinding slightly reduced the degradation rate with hematite and entirely cancelled the enhancing effect of grinding with Al-montmorillonite. Wet grinding in the presence of the transition metals: Ni(2+), Cu(2+), Fe(3+) added as chlorides was carried out. Addition of Cu(2+) to Na-montmorillonite loaded with imazaquin was the most effective treatment in degrading imazaquin (more than 90% of the imazaquin degraded after 5 min of grinding). In this treatment, Cu-montmorillonite formation during the grinding process was confirmed by XRD and accordingly, grinding with Cu-montmorillonite gave similar degradation values. LC-MS analysis revealed that the mechanochemical transformation of imazaquin resulted in the formation of a dimer and several breakdown products. The reported results demonstrate once again that mechanochemical procedures offer a remediation avenue applicable to soils polluted with organic contaminants.

Degradation of soil-sorbed trichloroethylene by stabilized zero valent iron nanoparticles: Effects of sorption, surfactants, and natural organic matter

Energy Technology Data Exchange (ETDEWEB)

Zhang, Man [Auburn University, Auburn, Alabama; He, Feng [ORNL; Zhao, Dongye [Auburn University, Auburn, Alabama; Hao, Xiaodi [Beijing University of Civil Engineering and Architecture

2011-01-01

Zero valent iron (ZVI) nanoparticles have been studied extensively for degradation of chlorinated solvents in the aqueous phase, and have been tested for in-situ remediation of contaminated soil and groundwater. However, little is known about its effectiveness for degrading soil-sorbed contaminants. This work studied reductive dechlorination of trichloroethylene (TCE) sorbed in two model soils (a potting soil and Smith Farm soil) using carboxymethyl cellulose (CMC) stabilized Fe-Pd bimetallic nanoparticles. Effects of sorption, surfactants and dissolved organic matter (DOC) were determined through batch kinetic experiments. While the nanoparticles can effectively degrade soil-sorbed TCE, the TCE degradation rate was strongly limited by desorption kinetics, especially for the potting soil which has a higher organic matter content of 8.2%. Under otherwise identical conditions, {approx}44% of TCE sorbed in the potting soil was degraded in 30 h, compared to {approx}82% for Smith Farm soil (organic matter content = 0.7%). DOC from the potting soil was found to inhibit TCE degradation. The presence of the extracted SOM at 40 ppm and 350 ppm as TOC reduced the degradation rate by 34% and 67%, respectively. Four prototype surfactants were tested for their effects on TCE desorption and degradation rates, including two anionic surfactants known as SDS (sodium dodecyl sulfate) and SDBS (sodium dodecyl benzene sulfonate), a cationic surfactant hexadecyltrimethylammonium (HDTMA) bromide, and a non-ionic surfactant Tween 80. All four surfactants were observed to enhance TCE desorption at concentrations below or above the critical micelle concentration (cmc), with the anionic surfactant SDS being most effective. Based on the pseudo-first-order reaction rate law, the presence of 1 x cmc SDS increased the reaction rate by a factor of 2.5 when the nanoparticles were used for degrading TCE in a water solution. SDS was effective for enhancing degradation of TCE sorbed in Smith Farm

Characterization of cell-free extracts from fenpropathrin-degrading strain Bacillus cereus ZH-3 and its potential for bioremediation of pyrethroid-contaminated soils.

Science.gov (United States)

Liu, Jie; Huang, Wenwen; Han, Haitao; She, Changchun; Zhong, Guohua

2015-08-01

Synthetic pyrethroid fenpropathrin has received increasing attention because of its environmental contamination and toxic effects on non-target organisms including human beings. Here we report the degradation characteristics of cell-free extracts from fenpropathrin-degrading strain Bacillus cereus ZH-3 and its potential for pyrethroid bioremediation in soils. 50mg·L(-1) of fenpropathrin was decreased to 20.6mg·L(-1) by the enzymatic extracts (869.4mg·L(-1)) within 30min. Kinetic constants Km and Vm were determined to be 1006.7nmol·L(-1) and 56.8nmol·min(-1), respectively. Degradation products were identified as 3-phenoxybenzaldehyde, α-hydroxy-3-phenoxy-benzeneacetonitrile and phenol by gas chromatography-mass spectrometry (GC-MS). In addition to degradation of fenpropathrin, the cell-free extracts could degrade other pyrethroids including beta-cypermethrin, cyfluthrin, deltamethrin and cypermethrin. Additionally, the reaction conditions were optimized. In the sterile and non-sterile soils, 50mg·kg(-1) of fenpropathrin was reduced to 15.3 and 13.9mg·L(-1) in 1d, respectively. Sprayed 100 and 300mg·kg(-1) of fenpropathrin emulsifiable concentrate (EC), up to 84.6% and 92.1% of soil fenpropathrin were removed from soils within 7d, respectively. Taken together, our results depict the biodegradation characteristics of cell-free extracts from B. cereus ZH-3, highlight its promising potential in bioremediation of pyrethroid-contaminated soils and also provide new insights into the utilization of degrading microbes. Copyright © 2015. Published by Elsevier B.V.

The importance of Soil Science to understand and remediate Land Degradation and Desertification processes

Science.gov (United States)

Bouma, Johan; Keesstra, Saskia; Cerdà, Artemi

2017-04-01

Documentation is abundantly available to demonstrate the devastating effect of Land degradation and desertification on sustainable development in many countries. This present a major barrier to achieving the UN Sustainable Development Goals by 2030, as agreed upon at the General Assembly of the UN in September 2015. Research has certainly been successful in reversing these two processes in many case studies but persistant problems remain not only in developing countries but also in developed countries where, for example, soil compaction and loss of soil organic matter due to the industrialization of agriculture, result in a structural decline of agricultural productivity and environmental quality. The problems are quite complex because not only technical matters play a role but also, and often quite prominantly, socio-economic factors. What turn out to be successful remediation procedures at a given location or region, based on the characterization of underlying soil processes, will most likely not work in other regions inhibiting the extrapolation of local research results to areas elsewhere. One important reason for location specificity of research is the variation of soil properties in combination with the location of soils in a given landscape which governs its water, energy and nutrient dynamics, also considering the climate. Different soils are characterized by different natural riks for degradation and , in arid regions, deserticification and their particular remediation potential differs widely as well. Such risks can sometimes be overcome by innovative soil management and knowing the soil type, the climate and landscape processes, extrapolation of such types of innovative management to comparable soils and landscapes elsewhere may be feasible and effective , provided that socio-economic conditions allow the required risk-reducing measures to be realized in practice. More cooperation between soil scientists and physical geographers, familiar with landscape

Soil quality changes in land degradation as indicated by soil chemical, biochemical and microbiological properties in a karst area of southwest Guizhou, China

Science.gov (United States)

Zhang, Pingjiu; Li, Lianqing; Pan, Genxing; Ren, Jingchen

2006-12-01

Not only the nutritional status and biological activity but also the soil ecological functioning or soil health has been impacted profoundly by land degradation in the karst area of southwest China where the karst ecosystems are generally considered as extremely vulnerable to land degradation under intensified land-use changes. The objectives of this study are to elucidate the changes in overall soil quality by a holistic approach of soil nutritional, biological activity, and soil health indicators in the karst area as impacted by intense cultivation and vegetation degradation. Topsoil samples were collected on selected eco-tesserae in a sequence of land degradation in a karst area of southwest Guizhou in 2004. The soil nutrient pools of organic carbon (Corg), extractable extracellular carbon (Cext), total soil nitrogen (Nt), alkali-hydrolyzable nitrogen (Nah), total phosphorus (Pt), available phosphorus (Pa) were analyzed by wet soil chemistry. The soil biological properties were studied by means of measurements of microbial biomass carbon (both by fumigation-extraction, FE-Cmic, and by calculation from substrate-incubation respiration, SIR-Cmic) of respiration [respiration without addition of substrates, basal respiration (BR), and potential respiration (PR) with substrate-incubation] and of soil enzyme activities (invertase, urease, and alkaline phosphatase). Soil health status was assessed by simple indices of Cmic/Corg and BR/Cmic in conjunction with bacterial community structures determined by polymerase chain reaction and denaturing gradient gel electrophoresis. While the nutritional pool parameters, such as Corg and Cext, described basically the changes in soil life-supporting capacity with cultivation interference and vegetation declined, those parameters of biological activity such as FE-Cmic, SIR, and SIR-Cmic as well as bacterial community structures measured by molecular method evidenced well the changes in soil functioning for ecosystem health with

Degradation of hydrocarbons in soil samples analyzed within accepted analytical holding times

International Nuclear Information System (INIS)

Jackson, J.; Thomey, N.; Dietlein, L.F.

1992-01-01

Samples which are collected in conjunction with subsurface investigations at leaking petroleum storage tank sites and petroleum refineries are routinely analyzed for benzene, toluene, ethylbenzene, xylenes (BTEX), and total petroleum hydrocarbons (TPH). Water samples are preserved by the addition of hydrochloric acid and maintained at four degrees centigrade prior to analysis. This is done to prevent bacterial degradation of hydrocarbons. Chemical preservation is not presently performed on soil samples. Instead, the samples are cooled and maintained at four degrees centigrade. This study was done to measure the degree of degradation of hydrocarbons in soil samples which are analyzed within accepted holding times. Soil samples were collected and representative subsamples were prepared from the initial sample. Subsamples were analyzed in triplicate for BTEX and TPH throughout the length of the approved holding times to measure the extent of sample constituent degradation prior to analysis. Findings imply that for sandy soils, BTEX and TPH concentrations can be highly dependent upon the length of time which elapses between sample collection and analysis

Organochlorine Pesticides and Degradation Products in Soil around ...

African Journals Online (AJOL)

The levels and compositions of organochlorine pesticides and degradation products in soil samples collected from a former formulation plant in Morogoro municipality, Tanzania, were determined. Extraction was performed by pressurized fluid extraction using n-hexane:acetone (75:25) mixture. Clean-up of extracts was ...

Biodegradation and bioremediation potential of diazinon-degrading Serratia marcescens to remove other organophosphorus pesticides from soils.

Science.gov (United States)

Cycoń, Mariusz; Żmijowska, Agnieszka; Wójcik, Marcin; Piotrowska-Seget, Zofia

2013-03-15

The ability of diazinon-degrading Serratia marcescens to remove organophosphorus pesticides (OPPs), i.e. chlorpyrifos (CP), fenitrothion (FT), and parathion (PT) was studied in a mineral salt medium (MSM) and in three soils of different characteristics. This strain was capable of using all insecticides at concentration of 50 mg/l as the only carbon source when grown in MSM, and 58.9%, 70.5%, and 82.5% of the initial dosage of CP, FT, and PT, respectively was degraded within 14 days. The biodegradation experiment showed that autochthonous microflora in all soils was characterized by a degradation potential of all tested OPPs; however, the initial lag phases for degradation of CP and FT, especially in sandy soil, were observed. During the 42-day experiment, 45.3%, 61.4% and 72.5% of the initial dose of CP, FT, and PT, respectively, was removed in sandy soil whereas the degradation of CP, FT, and PT in the same period, in sandy loam and silty soils reached 61.4%, 79.7% and 64.2%, and 68.9%, 81.0% and 63.6%, respectively. S. marcescens introduced into sterile soils showed a higher degradation potential (5-13%) for OPPs removal than those observed in non-sterile soil with naturally occurring attenuation. Inoculation of non-sterile soils with S. marcescens enhanced the disappearance rates of all insecticides, and DT50 for CP, FT, and PT was reduced by 20.7, 11.3 and 13.0 days, and 11.9, 7.0 and 8.1 days, and 9.7, 14.5 and 12.6 days in sandy, sandy loam, and silty soils, respectively, in comparison with non-sterile soils with only indigenous microflora. This ability of S. marcescens makes it a suitable strain for bioremediation of soils contaminated with OPPs. Copyright © 2013 Elsevier Ltd. All rights reserved.

Chemical-based risk assessment and in vitro models of human health effects induced by organic pollutants in soils from the Olona valley

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Baderna, Diego, E-mail: diego.baderna@marionegri.it; Colombo, Andrea; Amodei, Giorgia; Cantù, Stefano; Teoldi, Federico; Cambria, Felice; Rotella, Giuseppe; Natolino, Fabrizio; Lodi, Marco; Benfenati, Emilio

2013-10-01

Risk assessment of soils is usually based on chemical measurements and assuming accidental soil ingestion and evaluating induced toxic and carcinogenic effects. Recently biological tools have been coupled to chemical-based risk assessment since they integrate the biological effects of all xenobiotics in soils. We employed integrated monitoring of soils based on chemical analyses, risk assessment and in vitro models in the highly urbanized semirural area of the Olona Valley in northern Italy. Chemical characterization of the soils indicated low levels of toxic and carcinogenic pollutants such as PAHs, PCDD/Fs, PCBs and HCB and human risk assessment did not give any significant alerts. HepG2 and BALB/c 3T3 cells were used as a model for the human liver and as a tool for the evaluation of carcinogenic potential. Cells were treated with soil extractable organic matters (EOMs) and the MTS assay, LDH release and morphological transformation were selected as endpoints for toxicity and carcinogenicity. Soil EOMs induced dose-dependent inhibition of cell growth at low doses and cytotoxicity after exposure to higher doses. This might be the result of block of cell cycle progression to repair DNA damage caused by oxidative stress; if this DNA damage cannot be repaired, cells die. No significant inductions of foci were recorded after exposure to EOMs. These results indicate that, although the extracts contain compounds with proven carcinogenic potential, the levels of these pollutants in the analyzed soils were too low to induce carcinogenesis in our experimental conditions. In this proposed case study, HepG2 cells were found an appropriate tool to assess the potential harm caused by the ingestion of contaminated soil as they were able to detect differences in the toxicity of soil EOMs. Moreover, the cell transformation assay strengthened the combined approach giving useful information on carcinogenic potential of mixtures. Highlights: • A combined approach for risk

Degradation of roxarsone in a silt loam soil and its toxicity assessment.

Science.gov (United States)

Liang, Tengfang; Ke, Zhengchen; Chen, Qing; Liu, Li; Chen, Guowei

2014-10-01

The land application of poultry or swine litter, containing large amounts of roxarsone, causes serious arsenic pollution in soil. Understanding biotransformation process of roxarsone and its potential risks favors proper disposal of roxarsone-contaminated animal litter, yet remains not achieved. We report an experimental study of biotransformation process of roxarsone in a silt loam soil under various soil moisture and temperature conditions, and the toxicity of roxarsone and its products from degradation. Results showed that soil moisture and higher temperature promoted roxarsone degradation, associating with emergent pentavalent arsenic. Analysis of fluorescein diacetate (FDA) hydrolysis activity revealed that roxarsone does not exert acute toxic on soil microbes. With the release of inorganic arsenic, FDA hydrolysis activity was inhibited gradually, as evidenced by ecotoxicological assessment using Photobacterium leiognathi. The results shade new lights on the dynamic roxarsone biotransformation processes in soil, which is important for guiding appropriate disposal of poultry or swine litter in the environment. Copyright © 2014 Elsevier Ltd. All rights reserved.

Isolation and characterization of mesotrione-degrading Bacillus sp. from soil

International Nuclear Information System (INIS)

Batisson, Isabelle; Crouzet, Olivier; Besse-Hoggan, Pascale; Sancelme, Martine; Mangot, Jean-Francois; Mallet, Clarisse; Bohatier, Jacques

2009-01-01

Dissipation kinetics of mesotrione, a new triketone herbicide, sprayed on soil from Limagne (Puy-de-Dome, France) showed that the soil microflora were able to biotransform it. Bacteria from this soil were cultured in mineral salt solution supplemented with mesotrione as sole source of carbon for the isolation of mesotrione-degrading bacteria. The bacterial community structure of the enrichment cultures was analyzed by temporal temperature gradient gel electrophoresis (TTGE). The TTGE fingerprints revealed that mesotrione had an impact on bacterial community structure only at its highest concentrations and showed mesotrione-sensitive and mesotrione-adapted strains. Two adapted strains, identified as Bacillus sp. and Arthrobacter sp., were isolated by colony hybridization methods. Biodegradation assays showed that only the Bacillus sp. strain was able to completely and rapidly biotransform mesotrione. Among several metabolites formed, 2-amino-4-methylsulfonylbenzoic acid (AMBA) accumulated in the medium. Although sulcotrione has a chemical structure closely resembling that of mesotrione, the isolates were unable to degrade it. - A Bacillus sp. strain isolated from soil was able to completely and rapidly biotransform the triketone herbicide mesotrione

Human-induced environmental degradation during Anthropocene in Turkey

Science.gov (United States)

Efe, Recep; Curebal, Isa; Soykan, Abdullah; Sönmez, Suleyman

2015-04-01

affected by humans (Sanderson et al., 2002; Braje&Erlandson, 2014). The area left in its natural state corresponds to only 15%. Due to population increase, agricultural areas shrinked, forests were destroyed, and pastures declined in size. More chemical fertilizers and agricultural pesticides were used in order to obtain more products. A greater number of machines were employed in agriculture, which led to a rise in the number of products. The human pressure on the environment in Anatolia dates back to thousands of years. Nomadic peoples on these lands have settled in the last 200 years due to settlement policies (Cürebal et al., 2015). This process saw the establishment of villages in higher and inclined areas as a result of the effects of the nomadic culture of Turkomans and other people in Anatolia. Forests in the inclined areas around these villages were destroyed and turned into agricultural areas. Machines, fertilizers, and pesticides were utilized in agricultural activities in order to produce more crops. This transformation led to an increased erosion effect, deterioration of soil, agricultural and environmental pollution (Chin et al., 2013; Hoang et al., 2014; Matteo et al., 2014). The change caused by industrialization gained ground in the 1950s in Turkey. In particular, migration from rural areas to cities gaining pace after the World War II brought about an increased human pressure in and around big cities. Areas around the cities became centers of attraction for many people. Plains around settlement areas were opened to settlement, and most industrial facilities were established there. As a consequence, first class agricultural areas were lost. Settlements and industrial areas generated large amounts of solid and liquid waste. Uncontrolled discharge of liquid waste and intensely stored solid waste caused the physical and chemical pollution of rivers, lakes, and seas to increase in Turkey and other parts of the world (Andersson et al., 2006; Steffen et al

Liming effect in the degradation of 14C-glyphosate in soils

Energy Technology Data Exchange (ETDEWEB)

Arantes, Sayonara A.C.M.; Lavorenti, Arquimedes [Universidade de Sao Paulo (USP), Piracicaba, SP (Brazil). Escola Superior de Agricultura Luiz de Queiroz]. E-mails: samoreno@esalq.usp.br; alavoren@esalq.usp.br; Tornisielo, Valdemar L. [Centro de Energia Nuclear na Agricultura (CENA), Piracicaba, SP (Brazil)]. E-mail: vltornis@cena.usp.br

2007-07-01

Liming is soil fertility management practice essential in tropical soils, in general extremely acidic. This practice, by influencing physical, chemical and biological features of soils may influence the behavior of organic molecules in soils. The glyphosate is one the most widely used pesticides in Brazil in several cultures to pest management control. Studies on its fate in soil are still incipient, mainly under the effect of liming practice The objective of the present study was to verify the effect of liming practice in the degradation of glyphosate in Red Latosol (LE) and Quartzarenic Neosol (RQ) soils and also in the microbial activity of the same soils. The experiment was conducted in a completely randomized design in a 2 x 2 factorial scheme, corresponding to two soils and two management conditions (with liming and without liming), with four replicates. The Radiometric technique was utilized to evaluate the evolution the {sup 14}CO{sub 2} at intervals of 7 days, during 70 days. The study of microbial activity was conducted parallel to the degradation experiment, using the methodology of radiolabelled glucose ({sup 14}C-glucose), which was measured at intervals of fourteen days, during 70 days. The results showed that in the studied soils, the liming increased the {sup 14}C-glyphosate mineralization and the microbial activity. (author)

Land degradation and adoption of soil conservation technologies ...

African Journals Online (AJOL)

The study investigates the causes of land degradation, and adoption of soil conservation practices using a two-stage decision making process. The data for the study were collected with the aid of structured questionnaire and analyzed with descriptive analysis, difference regression equation and simultaneous probit model.

Aspects of Degradability and Aging of Natural Rubber Latex Films Obtained by Induced Ionizing Radiation Processes of Latex Vulcanization

International Nuclear Information System (INIS)

Parra, D. F.

2006-01-01

This study refers to the degradability of NRLF, natural rubber latex films, obtained by ionizing radiation. Three types of NRLF were prepared: irradiated latex, irradiated latex with about 1% of soy lecithin and sulfur-vulcanized latex, by cold vulcanization process. The films were buried in vases of two different kinds of soil: common soil and common soil with earthworm humus. Fast aging tests in laboratory with exposition to ultraviolet rays were done in irradiated latex films and irradiated latex films with soy lecithin. The results obtained after ten months of tests with buried films agree with the results of the fast aging tests, showing singularities of each type of soil and each kind of latex process. It also shows how weather inclemency can induce the films degradation process. The sulfur-vulcanized films were weakly degraded when buried. The films with lecithin and buried in vase with only common soil showed the biggest mass loss, but the films with lecithin buried in vases with common earthworm humus and soil increased their weigh and dimensions due to fungi formation. The irradiated latex films are more degradable then the sulfur-vulcanized films. The irradiated latex film, unlike the sulfur vulcanized film, showed high fungi colonization when buried. We conclude that the irradiated latex films are more easily biodegradable than the sulfur vulcanized latex films. The biodegradability increases with the addition of small amounts of soy lecithin (∼1%). The mechanical resistance of the buried films decreased related to the non-buried ones, proving that the outdoor aging in soil and the presence of fungi in the films can modify the mechanical properties of the irradiated latex owing to the biodegradation

Effects of interactions between Collembola and soil microbial community on the degradation of glyphosate-based herbicide

Science.gov (United States)

Wee, J.; Lee, Y. S.; Son, J.; Kim, Y.; Nam, T. H.; Cho, K.

2017-12-01

Glyphosate is the most widely used herbicide because of its broad spectrum activity and effectiveness, however, little is known about adverse effects on non-target species and their interactions. Therefore, in this study, we investigated the effects of glyphosate on interactions between Collembola and soil microbial community and the effect of Collembola on degradation of glyphosate. The experiment carried out in PS container filled with 30g of soil according to OECD 232 guidelines. Investigating the effects of soil microbial community and Collembola on degradation of glyphosate, we prepared defaunated field soil (only maintaining soil microbial community, sampling in May and September, 2016.) and autoclaved soil with 0, 10, 30 adults of Paronychiurus kimi (Collembola) respectively. Survived adults and hatched juveniles of P. kimi were counted after 28-day exposures in both soils spiked with 100 mg/kg of glyphosate. Glyphosate in soil of 7, 14, 21, 28 days after spiking of glyphosate based herbicide was analyzed by spectrophotometer (Jan et al., 2009). Also soil microbial community structure was investigated using phospholipid fatty acids (PLFAs) composition analysis of soils following the procedures given by the Sherlock Microbial Identification System (MIDI Inc., Newark, DE). Glyphosate (100mg/kg soil) has no effects on reproduction and survival of P. kimi in any soils. Also, glyphosate in soils with Collembola was more rapidly degraded. Rapid increase of soil microbial biomass(PLFAs) was shown in soil with Collembola addition. This result showed that glyphosate affected interactions between Collembola and soil microorganisms, and also soil microbial community affected by Collembola changed degradation of glyphosate.

Diuron degradation by bacteria from soil of sugarcane crops

Directory of Open Access Journals (Sweden)

Tassia C. Egea

2017-12-01

Full Text Available The isolation of microorganisms from soil impacted by xenobiotic chemicals and exposing them in the laboratory to the contaminant can provide important information about their response to the contaminants. The purpose of this study was to isolate bacteria from soil with historical application of herbicides and to evaluate their potential to degrade diuron. The isolation media contained either glucose or diuron as carbon source. A total of 400 bacteria were isolated, with 68% being Gram-positive and 32% Gram-negative. Most isolates showed potential to degrade between 10 and 30% diuron after five days of cultivation; however Stenotrophomonas acidophila TD4.7 and Bacillus cereus TD4.31 were able to degrade 87% and 68%, respectively. The degradation of diuron resulted in the formation of the metabolites DCPMU, DCPU, DCA, 3,4-CAC, 4-CA, 4-CAC and aniline. Based on these results it was proposed that Pseudomonas aeruginosa TD2.3, Stenotrophomonas acidaminiphila TD4.7, B. cereus TD4.31 and Alcaligenes faecalis TG 4.48, act on 3,4-DCA and 4-CA by alkylation and dealkylation while Micrococcus luteus and Achromobacter sp follow dehalogenation directly to aniline. Growth on aniline as sole carbon source demonstrates the capacity of strains to open the aromatic ring. In conclusion, the results show that the role of microorganisms in the degradation of xenobiotics in the environment depends on their own metabolism and also on their synergistic interactions.

14C tebuconazole degradation in Colombian soils.

Science.gov (United States)

Mosquera, C S; Martínez, M J; Guerrero, J A

2010-01-01

Tebuconazole is a fungicide used on onion crops (Allium Fistulosum L) in Colombia. Persistence of pesticides in soils is characterized by the half-life (DT50), which is influenced by their chemical structure, the physical and chemical properties of the soil and the previous soil history. Based on its structural and chemical properties, tebuconazole should be expected to be relatively persistent in soils. Laboratory incubation studies were conducted to evaluate persistence and bond residues of 14C tebuconazole in three soils, two inceptisol (I) and one histosol (H). Textural classifications were: loam (101), loamy sand (102) and loam (H03), respectively. Data obtained followed a first-order degradation kinetics (R2 > or = 0.899) with DT50 values between 158 and 198 days. The production of 14CO2 from the 14C-ring-labelled test chemicals was very low and increased slightly during 63 days in all cases. The methanol extractable 14C-residues were higher than aqueous ones and both decreased over incubation time for the three soils. The formation of bound 14C-residues increased with time and final values were 11.3; 5.55 and 7.87% for 101, 102 and H03 respectively. Soil 101 showed the lowest mineralization rate and the highest bound residues formation, which might be explained by the clay fraction content. In contrast, an inverse behavior was found for soils 102 and H03, these results might be explained by the higher soil organic carbon content.

Degradation of Triazine-2-(14C Metsulfuron-Methyl in Soil from an Oil Palm Plantation.

Directory of Open Access Journals (Sweden)

B S Ismail

Full Text Available Triazine-2-(14C metsulfuron-methyl is a selective, systemic sulfonylurea herbicide. Degradation studies in soils are essential for the evaluation of the persistence of pesticides and their breakdown products. The purpose of the present study was to investigate the degradation of triazine-2-(14C metsulfuron-methyl in soil under laboratory conditions. A High Performance Liquid Chromatograph (HPLC equipped with an UV detector and an on-line radio-chemical detector, plus a Supelco Discovery column (250 x 4.6 mm, 5 μm, and PRP-1 column (305 x 7.0 mm, 10 μm was used for the HPLC analysis. The radioactivity was determined by a Liquid Scintillation Counter (LSC in scintillation fluid. The soil used was both sterilized and non-sterilized in order to observe the involvement of soil microbes. The estimated DT50 and DT90 values of metsulfuron-methyl in a non-sterile system were observed to be 13 and 44 days, whereas in sterilized soil, the DT50 and DT90 were 31 and 70 days, respectively. The principal degradation product after 60 days was CO2. The higher cumulative amount of (14CO2 in (14C-triazine in the non-sterilized soil compared to that in the sterile system suggests that biological degradation by soil micro-organisms significantly contributes to the dissipation of the compound. The major routes of degradation were O-demethylation, sulfonylurea bridge cleavage and the triazine "ring-opened."

Degradation of Biofumigant Isothiocyanates and Allyl Glucosinolate in Soil and Their Effects on the Microbial Community Composition.

Directory of Open Access Journals (Sweden)

Franziska S Hanschen

Full Text Available Brassicales species rich in glucosinolates are used for biofumigation, a process based on releasing enzymatically toxic isothiocyanates into the soil. These hydrolysis products are volatile and often reactive compounds. Moreover, glucosinolates can be degraded also without the presence of the hydrolytic enzyme myrosinase which might contribute to bioactive effects. Thus, in the present study the stability of Brassicaceae plant-derived and pure glucosinolates hydrolysis products was studied using three different soils (model biofumigation. In addition, the degradation of pure 2-propenyl glucosinolate was investigated with special regard to the formation of volatile breakdown products. Finally, the influence of pure glucosinolate degradation on the bacterial community composition was evaluated using denaturing gradient gel electrophoresis of 16S rRNA gene amplified from total community DNA. The model biofumigation study revealed that the structure of the hydrolysis products had a significant impact on their stability in the soil but not the soil type. Following the degradation of pure 2-propenyl glucosinolate in the soils, the nitrile as well as the isothiocyanate can be the main degradation products, depending on the soil type. Furthermore, the degradation was shown to be both chemically as well as biologically mediated as autoclaving reduced degradation. The nitrile was the major product of the chemical degradation and its formation increased with iron content of the soil. Additionally, the bacterial community composition was significantly affected by adding pure 2-propenyl glucosinolate, the effect being more pronounced than in treatments with myrosinase added to the glucosinolate. Therefore, glucosinolates can have a greater effect on soil bacterial community composition than their hydrolysis products.

Microbial degradation pathways of the herbicide dichlobenil in soils with different history of dichlobenil-exposure

International Nuclear Information System (INIS)

Holtze, Maria S.; Hansen, Hans Christian B.; Juhler, Rene K.; Sorensen, Jan; Aamand, Jens

2007-01-01

This is the first detailed study of metabolite production during degradation of the herbicide 2,6-dichlorobenzonitrile (dichlobenil). Degradation of dichlobenil and three potential metabolites: 2,6-dichlorobenzamide (BAM), 2,6-dichlorobenzoic acid (2,6-DCBA) and ortho-chlorobenzamide (OBAM) was studied in soils either previously exposed or not exposed to dichlobenil using a newly developed HPLC method. Dichlobenil was degraded in all four soils; BAM and 2,6-DCBA were only degraded in soils previously exposed to dichlobenil (100% within 35-56 days and 85-100% in 56 days, respectively), and OBAM in all four soils (25-33% removal in 48 days). BAM produced from dichlobenil was either hydrolyzed to 2,6-DCBA or dechlorinated to OBAM, which was further hydrolyzed to ortho-chlorobenzoic acid. BAM was rapidly mineralized in previously exposed soils only. All potential metabolites and the finding that BAM was a dead-end metabolite of dichlobenil in soils not previously exposed to dichlobenil needs to be included in risk assessments of the use of dichlobenil. - BAM produced from dichlobenil was either hydrolyzed to 2,6-DCBA or dechlorinated to OBAM, which was further hydrolyzed to ortho-chlorobenzoic acid

Microbial degradation pathways of the herbicide dichlobenil in soils with different history of dichlobenil-exposure

Energy Technology Data Exchange (ETDEWEB)

Holtze, Maria S. [Department of Natural Sciences, Soil and Environmental Chemistry, Royal Veterinary and Agricultural University, Thorvaldsensvej 40, DK-1871 Frederiksberg C (Denmark) and Department of Geochemistry, Geological Survey of Denmark and Greenland, Oster Voldgade 10, DK-1350 Copenhagen K (Denmark) and Section of Genetics and Microbiology, Department of Ecology, Royal Veterinary and Agricultural University, Thorvaldsensvej 40, DK-1871 Frederiksberg C (Denmark)]. E-mail: msh@geus.dk; Hansen, Hans Christian B. [Department of Natural Sciences, Soil and Environmental Chemistry, Royal Veterinary and Agricultural University, Thorvaldsensvej 40, DK-1871 Frederiksberg C (Denmark); Juhler, Rene K. [Department of Geochemistry, Geological Survey of Denmark and Greenland, Oster Voldgade 10, DK-1350 Copenhagen K (Denmark); Sorensen, Jan [Section of Genetics and Microbiology, Department of Ecology, Royal Veterinary and Agricultural University, Thorvaldsensvej 40, DK-1871 Frederiksberg C (Denmark); Aamand, Jens [Department of Geochemistry, Geological Survey of Denmark and Greenland, Oster Voldgade 10, DK-1350 Copenhagen K (Denmark)

2007-07-15

This is the first detailed study of metabolite production during degradation of the herbicide 2,6-dichlorobenzonitrile (dichlobenil). Degradation of dichlobenil and three potential metabolites: 2,6-dichlorobenzamide (BAM), 2,6-dichlorobenzoic acid (2,6-DCBA) and ortho-chlorobenzamide (OBAM) was studied in soils either previously exposed or not exposed to dichlobenil using a newly developed HPLC method. Dichlobenil was degraded in all four soils; BAM and 2,6-DCBA were only degraded in soils previously exposed to dichlobenil (100% within 35-56 days and 85-100% in 56 days, respectively), and OBAM in all four soils (25-33% removal in 48 days). BAM produced from dichlobenil was either hydrolyzed to 2,6-DCBA or dechlorinated to OBAM, which was further hydrolyzed to ortho-chlorobenzoic acid. BAM was rapidly mineralized in previously exposed soils only. All potential metabolites and the finding that BAM was a dead-end metabolite of dichlobenil in soils not previously exposed to dichlobenil needs to be included in risk assessments of the use of dichlobenil. - BAM produced from dichlobenil was either hydrolyzed to 2,6-DCBA or dechlorinated to OBAM, which was further hydrolyzed to ortho-chlorobenzoic acid.

How far can we prevent further physical soil degradation in the future?

Science.gov (United States)

Horn, Rainer

2017-04-01

Arable as well as forest soils are exposed to increasing external stresses, which coincide with a further and deeper reaching soil degradation, which may result in an aggravation of hydraulic, gaseous, thermal but also physicochemical and chemical soil functions. The decline coincides with a simultaneous reduction in useable land areas and worsens food production amongst others. Therefore, it is mandatory, that stable soil structure from the surface down to depth prevents soil compaction, sustains water infiltration, reduces rates of soil erosion by water and wind in each case to the minimum possible under the soil, terrain, land use, and climatic conditions in which the soils occur. It improves organic carbon storage in soils and optimizes microbial activity and functions. These benefits coincide with sustainable soil properties and soil management systems, which prevent - deep mechanical stress propagation which can cause irreversible soil deformation, - loss of surface soil layers with coinciding organic and mineral nutrient pool available for microbial processing and plant uptake, - Truncation of soil horizons, or damage on private and public infrastructures (roads, houses) and downstream fields. In order to prevent negative impacts on soils, it is recommended, that A) concerning prevention of soil compaction - stresses applied to soils shall not exceed the mechanical soil stability to maintain the actual functioning of chemical, physical and biological processes and to utilize their resilience (i.e. the elasticity), - land use management strategies have to be related to the actual soil properties in order to optimize plant growth, yield, filtering and buffering of infiltrating water, and carbon sequestration. B) soil erosion by - water, wind, and tillage is counteracted by an adequate surface soil stability including a site specific residue management (e.g. conservation tillage), controlled traffic and harvesting, ecological grassland use strategies (e

An integrated (nano-bio) technique for degradation of γ-HCH contaminated soil

Energy Technology Data Exchange (ETDEWEB)

Singh, Ritu [Ecotoxicology Division, CSIR-Indian Institute of Toxicology Research, Post Box 80, Mahatma Gandhi Marg, Lucknow 226 001, UP (India); Analytical Chemistry Division, CSIR-Indian Institute of Toxicology Research, Post Box 80, Mahatma Gandhi Marg, Lucknow 226 001, UP (India); Manickam, Natesan [Environmental Biotechnology Division, CSIR-Indian Institute of Toxicology Research, Post Box 80, Mahatma Gandhi Marg, Lucknow 226 001, UP (India); Mudiam, Mohana Krishna Reddy [Analytical Chemistry Division, CSIR-Indian Institute of Toxicology Research, Post Box 80, Mahatma Gandhi Marg, Lucknow 226 001, UP (India); Murthy, Ramesh Chandra, E-mail: murthyrc729@gmail.com [Analytical Chemistry Division, CSIR-Indian Institute of Toxicology Research, Post Box 80, Mahatma Gandhi Marg, Lucknow 226 001, UP (India); Misra, Virendra, E-mail: virendra_misra2001@yahoo.co.in [Ecotoxicology Division, CSIR-Indian Institute of Toxicology Research, Post Box 80, Mahatma Gandhi Marg, Lucknow 226 001, UP (India)

2013-08-15

Highlights: • An integrated (nano-bio) technique is employed to degrade γ-HCH in soil. • Degradation efficiency of γ-HCH in integrated and individual systems is compared. • Synergistic effect was noticed on γ-HCH degradation in integrated system. • Integrated system was found 1.7–2.1 times more efficient than individual methods. • This technique could be exploited for other chlorinated pesticides as well. -- Abstract: We have evaluated the effect of an integrated (nano-bio) technique involving the use of stabilized Pd/Fe{sup 0} bimetallic nanoparticles (CMC-Pd/nFe{sup 0}) and a Sphingomonas sp. strain NM05, on the degradation of γ-HCH in soil. Factors affecting degradation such as pH, incubation temperature and γ-HCH initial concentration were also studied. The results revealed that γ-HCH degradation efficiency is ∼ 1.7–2.1 times greater in integrated system as compared to system containing either NM05 or CMC-Pd/nFe{sup 0} alone. The integration showed synergistic effect on γ-HCH degradation. Further, cell growth studies indicated that NM05 gets well acclimatized to nanoparticles, showing potential growth in the presence of CMC-Pd/nFe{sup 0} with respect to control system. This study signifies the potential efficacy of integrated technique to become an effective alternative remedial tool for γ-HCH contaminated soil. Further research in this direction could lead to the development of effective remediation strategies for other isomers of HCH and other chlorinated pesticides as well.

Bioremediation Potential of Native Hydrocarbons Degrading Bacteria in Crude Oil Polluted Soil

Directory of Open Access Journals (Sweden)

Mariana MARINESCU

2017-05-01

Full Text Available Bioremediation of crude oil contaminated soil is an effective process to clean petroleum pollutants from the environment. Crude oil bioremediation of soils is limited by the bacteria activity in degrading the spills hydrocarbons. Native crude oil degrading bacteria were isolated from different crude oil polluted soils. The isolated bacteria belong to the genera Pseudomonas, Mycobacterium, Arthrobacter and Bacillus. A natural biodegradable product and bacterial inoculum were used for total petroleum hydrocarbon (TPH removal from an artificial polluted soil. For soil polluted with 5% crude oil, the bacterial top, including those placed in the soil by inoculation was 30 days after impact, respectively 7 days after inoculum application, while in soil polluted with 10% crude oil,  multiplication top of bacteria was observed in the determination made at 45 days after impact and 21 days after inoculum application, showing once again how necessary is for microorganisms habituation and adaptation to environment being a function of pollutant concentration. The microorganisms inoculated showed a slight adaptability in soil polluted with 5% crude oil, but complete inhibition in the first 30 days of experiment at 10% crude oil.

Exploration of hydrocarbon degrading bacteria on soils contaminated by crude oil from South Sumatera

Directory of Open Access Journals (Sweden)

A. Napoleon

2014-07-01

Full Text Available The goal of this research was to explore hydrocarbon degrading bacteria on crude oil contaminated soil with potential to degrade hydrocarbon in oil pollutant. The research started by early August 2013 till January 2014. Soil sampling for this research was taken on several places with contaminated soil location such as Benakat, Rimau, and Pengabuan all of it located in South Sumatera. Conclusion from this research Isolates obtained from three (3 sites of contaminated soil and treated using SBS medium were Bacillus cereus, Pseudomonas aeruginosa, Klebsiella pnumoniae, Streptococcus beta hemolisa, Proteus mirabilis, Staphylococcus epidermis and Acinotobacter calcoaceticus. Isolates that survived on 300 ppm of hydrocarbon concentration were Bacillus cereus, Pseudomonas aeruginosa and Acinetobacter cakciaceticus Selected isolates posses the ability to degrade hydrocarbon by breaking hydrocarbon substance as the energy source to support isolates existence up to 1,67 TPH level. Based on results accomplish by this research, we urge for further research involving the capacity of isolates to degrade wide variety of hydrocarbon substance and more to develop the potential of these bacteria for bioremediation.

Apparent Contradiction: Psychrotolerant Bacteria from Hydrocarbon-Contaminated Arctic Tundra Soils That Degrade Diterpenoids Synthesized by Trees

Science.gov (United States)

Yu, Zhongtang; Stewart, Gordon R.; Mohn, William W.

2000-01-01

Resin acids are tricyclic terpenoids occurring naturally in trees. We investigated the occurrence of resin acid-degrading bacteria on the Arctic tundra near the northern coast of Ellesmere Island (82°N, 62°W). According to most-probable-number assays, resin acid degraders were abundant (103 to 104 propagules/g of soil) in hydrocarbon-contaminated soils, but they were undetectable (soil) in pristine soils from the nearby tundra. Plate counts indicated that the contaminated and the pristine soils had similar populations of heterotrophs (106 to 107 propagules/g of soil). Eleven resin acid-degrading bacteria belonging to four phylogenetically distinct groups were enriched and isolated from the contaminated soils, and representative isolates of each group were further characterized. Strains DhA-91, IpA-92, and IpA-93 are members of the genus Pseudomonas. Strain DhA-95 is a member of the genus Sphingomonas. All four strains are psychrotolerant, with growth temperature ranges of 4°C to 30°C (DhA-91 and DhA-95) or 4°C to 22°C (IpA-92 and IpA-93) and with optimum temperatures of 15 to 22°C. Strains DhA-91 and DhA-95 grew on the abietanes, dehydroabietic and abietic acids, but not on the pimaranes, isopimaric and pimaric acids. Strains IpA-92 and IpA-93 grew on the pimaranes but not the abietanes. All four strains grew on either aliphatic or aromatic hydrocarbons, which is unusual for described resin acid degraders. Eleven mesophilic resin acid degraders did not use hydrocarbons, with the exception of two Mycobacterium sp. strains that used aliphatic hydrocarbons. We conclude that hydrocarbon contamination in Arctic tundra soil indirectly selected for resin acid degraders, selecting for hydrocarbon degraders that coincidentally use resin acids. Psychrotolerant resin acid degraders are likely important in the global carbon cycle and may have applications in biotreatment of pulp and paper mill effluents. PMID:11097882

Associations of Pseudomonas species and forage grasses enhance degradation of chlorinated benzoic acids in soil

Energy Technology Data Exchange (ETDEWEB)

Siciliano, S. D.

1998-12-01

Using chlorinated benzoic acid (CBA) as a model compound, this study attempted to show that microorganisms and plants can be used as bioremediation agents to clean up contaminated soil sites in a cost effective and environmentally friendly manner. CBA was used because it is present in soils contaminated with polychlorinated biphenyls (PCBs), or chlorinated pesticides. Sixteen forage grasses were screened in combination with 12 bacterial inoculants for their ability to promote the degradation of CBA in soil. Five associations of plants and bacteria were found to degrade CBA to a greater extent than plants without bacterial inoculants. Bacterial inoculants were shown to stimulate CBA degradation by altering the microbial community present on the root surface and thereby increasing the ability of this community to degrade CBA.

[Degradation characteristics of naphthalene with a Pseudomonas aeruginosa strain isolated from soil contaminated by diesel].

Science.gov (United States)

Liu, Wen-Chao; Wu, Bin-Bin; Li, Xiao-Sen; Lu, Dian-Nan; Liu, Yong-Min

2015-02-01

Abstract: A naphthalene-degrading bacterium (referred as HD-5) was isolated from the diesel-contaminated soil and was assigned to Pseudomonas aeruginosa according to 16S rDNA sequences analysis. Gene nah, which encodes naphthalene dioxygenase, was identified from strain HD-5 by PCR amplification. Different bioremediation approaches, including nature attenuation, bioaugmentation with strain Pseudomonas aeruginosa, biostimulation, and an integrated degradation by bioaugmentation and biostimulation, were evaluated for their effectiveness in the remediating soil containing 5% naphthalene. The degradation rates of naphthalene in the soil were compared among the different bioremediation approaches, the FDA and dehydrogenase activity in bioremediation process were measured, and the gene copy number of 16S rRNA and nah in soil were dynamically monitored using real-time PCR. It was shown that the naphthalene removal rate reached 71.94%, 62.22% and 83.14% in approaches of bioaugmentation (B), biostimulation(S) and integrated degradation composed of bioaugmentation and biostimulation (BS), respectively. The highest removal rate of naphthalene was achieved by using BS protocol, which also gives the highest FDA and dehydrogenase activity. The gene copy number of 16S rRNA and nah in soil increased by about 2.67 x 10(11) g(-1) and 8.67 x 10(8) g(-1) after 31 days treatment using BS protocol. Above-mentioned results also demonstrated that the screened bacterium, Pseudomonas aeruginosa, could grow well in naphthalene-contaminated soil and effectively degrade naphthalene, which is of fundamental importance for bioremediation of naphthalene-contaminated soil.

DEGRADATION AND MIGRATION OF VINCLOZOLIN IN SAND AND SOIL

Science.gov (United States)

The migration of the dicarboximide fungicide vinclozolin and its principal degradation products through porous media was experimentally determined by simulating pesticide applications to a 23-30 mesh Ottawa sand and a North Carolina Piedmont, aquic hapludult soil in laboratory ...

Assessment of soil ecosystem in degraded areas of vineyards after organic treatments

Science.gov (United States)

Landi, Silvia; D'Errico, Giada; Gagnarli, Elena; Simoni, Sauro; Goggioli, Donatella; Guidi, Silvia; D'Avino, Lorenzo; Lagomarsino, Alessandra; Valboa, Giuseppe; Castaldini, Maurizio; Elio Agnelli, Alessandro; Fantappiè, Maria; Lorenzetti, Romina; Priori, Simone; Costantini, Edoardo A. C.

2017-04-01

In Italian vineyards, it is quite common to have areas characterized by problems in vine health, grape production and quality, often caused by improper land preparation before vine plantation and/or management. Causes for soil malfunctioning can include reduced contribution of the soil fauna to the ecosystem services such as nutrient cycles and organic matter turnover. ReSolVe is a transnational and interdisciplinary project, supported by Core-Organic+ program, aimed at testing the effects of selective agronomic strategies for restoring optimal soil functionality in degraded areas within organic vineyard. For this purpose, the evaluation and biomonitoring of the abundance of soil mesofauna, nematodes and microarthropods, represents an efficient tool to characterize the effects of crop management on soil quality. Assessing enzyme activities involved in the main biogeochemical cycling of C, N, P and S can also provide indication of soil functions and health status. Italian experimental plots are situated in two commercial farms in Tuscany: i) Fontodi, Panzano in Chianti (FI), which has been managed organically for more than 20 years and ii) San Disdagio, Roccastrada (GR), under organic farming since 2014. In each farm, three plots (250 m2 each) in the degraded areas and three relative control plots in the non-degraded areas were selected. The different restoring strategies implemented in each area were: i) compost, produced on farm by manure + pruning residue + grass, ii) faba bean and winter barley green manure, iii) dry mulching after sowing with Trifolium squarrosum L. Each treated and control plot has been studied for soil nematodes, microarthropods, enzymatic activity, and organic matter turnover using tea-bag index, as well as total organic carbon (TOC) and total nitrogen (TN). Soil sampling was carried out to 0-30 cm depth for TOC, TN, enzymes and nematodes and to 10 cm for microarthropods. Tea-bag index was determined following the Keuskamp et al. method

Land degradation in the Sudan Savanna of Ghana: A case study in ...

African Journals Online (AJOL)

Land degradation in the area is the result of interaction between the physical and human environments. Physical environmental characteristics influencing land degradation include soil texture, topography and rainfall. The soils in the study area are developed over granite and Birrimian phyllite. In the granitic areas soil ...

Dissipation and enantioselective degradation of plant growth retardants paclobutrazol and uniconazole in open field, greenhouse, and laboratory soils.

Science.gov (United States)

Wu, Chengwang; Sun, Jianqiang; Zhang, Anping; Liu, Weiping

2013-01-15

Greenhouses are increasingly important in human food supply. Pesticides used in greenhouses play important roles in horticulture; however, little is known about their behavior in greenhouse environments. This work investigates the dissipation and enantioselctive degradation of plant growth retardants including paclobutrazol and uniconazole in soils under three conditions (i.e., open field, greenhouse, and laboratory). The dissipation and enantioselective degradation of paclobutrazol and uniconazole in greenhouse were different from those in open field; they were more persistent in greenhouse than in open field soil. Leaching produced by rainfall is responsible for the difference in dissipation. Thus, local environmental impacts may occur more easily inside greenhouses, while groundwater may be more contaminated in open field. Spike concentrations of 5, 10, and 20 times the concentrations of native residues were tested for the enantioselective dissipation of the two pesticides; the most potent enantioselective degradation of paclobutrazol and uniconazole occurred at the 10 times that of the native residues in the greenhouse environments and at 20 times native residues in open field environments. The higher soil activity in greenhouses than in open fields was thought to be responsible for such a difference. The environmental risk and regulation of paclobutrazol and uniconazole should be considered at the enantiomeric level.

Enhancing crude oil degradation in a sandy soil: Effects of addition ...

African Journals Online (AJOL)

This study investigated the effects of the addition of poultry manure alone and in combination with surfactant (Goldcrew or Corexit) and/or alternate carbon substrate (glucose or starch) on crude oil degradation in a sandy soil. With poultry manure alone, optimal crude oil degradation was obtained at a concentration of 4.0% ...

Soil and Pesticides

Science.gov (United States)

; Environment Human Health Animal Health Safe Use Practices Food Safety Environment Air Water Soil Wildlife Home Page Pesticides and the Environment Soil and Pesticides Related Topics: What Happens to Pesticides español Soil and Pesticides Soil can be degraded and the community of organisms living in the soil can

Water quality degradation effects on freshwater availability: Impacts to human activities

Science.gov (United States)

Peters, N.E.; Meybeck, Michel

2000-01-01

The quality of freshwater at any point on the landscape reflects the combined effects of many processes along water pathways. Human activities on all spatial scales affect both water quality and quantity. Alteration of the landscape and associated vegetation has not only changed the water balance, but typically has altered processes that control water quality. Effects of human activities on a small scale are relevant to an entire drainage basin. Furthermore, local, regional, and global differences in climate and water flow are considerable, causing varying effects of human activities on land and water quality and quantity, depending on location within a watershed, geology, biology, physiographic characteristics, and climate. These natural characteristics also greatly control human activities, which will, in turn, modify (or affect) the natural composition of water. One of the most important issues for effective resource management is recognition of cyclical and cascading effects of human activities on the water quality and quantity along hydrologic pathways. The degradation of water quality in one part of a watershed can have negative effects on users downstream. Everyone lives downstream of the effects of some human activity. An extremely important factor is that substances added to the atmosphere, land, and water generally have relatively long time scales for removal or clean up. The nature of the substance, including its affinity for adhering to soil and its ability to be transformed, affects the mobility and the time scale for removal of the substance. Policy alone will not solve many of the degradation issues, but a combination of policy, education, scientific knowledge, planning, and enforcement of applicable laws can provide mechanisms for slowing the rate of degradation and provide human and environmental protection. Such an integrated approach is needed to effectively manage land and water resources.

Effect of dairy manure rate and the stabilization time of amended soils on atrazine degradation.

Science.gov (United States)

Aguilera, Paula; Briceño, Gabriela; Candia, Maribel; Mora, Maria de la Luz; Demanet, Rolando; Palma, Graciela

2009-10-01

The application rate of liquid cow manure (LCM) in the field and the stabilization time of amended soils before application of pre-plant herbicides are factors that determine their efficiency. This study includes evaluation of residual atrazine (2-chloro-4-ethylamino-6-isopropylamino-1,3,5-triazine) in soil and amended soils with equivalent rate of 100,000; 200,000; and 300,000 L ha(-1) of LCM and the effect of pre-incubation time of amended soils on atrazine degradation. The study was carried out under controlled conditions using an Andisol with previous historical application of atrazine. The respiratory activity and fluorescein diacetate (FDA) studies indicated that the time necessary for stabilization of amended soils is over 20-30 d. During the measurement of respiratory and FDA activity, no significant differences were observed when atrazine was applied. The half-life of atrazine ranged from 5 to 8d and the relative distribution of degradation products seem to be affected by the application of LCM. The pre-incubation time of amended soil and LCM dose would not affect atrazine degradation rate, when the soil has a history of herbicide application. However, repeated applications of LCM in a long period of time could change the soil pH and increase the content of dissolved organic carbon (DOC) which could further contribute to a faster degradation of atrazine. Both effects would reduce the effectiveness of atrazine in weed control.

Effect of elevated CO2 on chlorpyriphos degradation and soil microbial activities in tropical rice soil.

Science.gov (United States)

Adak, Totan; Munda, Sushmita; Kumar, Upendra; Berliner, J; Pokhare, Somnath S; Jambhulkar, N N; Jena, M

2016-02-01

Impact of elevated CO2 on chlorpyriphos degradation, microbial biomass carbon, and enzymatic activities in rice soil was investigated. Rice (variety Naveen, Indica type) was grown under four conditions, namely, chambered control, elevated CO2 (550 ppm), elevated CO2 (700 ppm) in open-top chambers and open field. Chlorpyriphos was sprayed at 500 g a.i. ha(-1) at maximum tillering stage. Chlorpyriphos degraded rapidly from rice soils, and 88.4% of initially applied chlorpyriphos was lost from the rice soil maintained under elevated CO2 (700 ppm) by day 5 of spray, whereas the loss was 80.7% from open field rice soil. Half-life values of chlorpyriphos under different conditions ranged from 2.4 to 1.7 days with minimum half-life recorded with two elevated CO2 treatments. Increased CO2 concentration led to increase in temperature (1.2 to 1.8 °C) that played a critical role in chlorpyriphos persistence. Microbial biomass carbon and soil enzymatic activities specifically, dehydrogenase, fluorescien diacetate hydrolase, urease, acid phosphatase, and alkaline phosphatase responded positively to elevated CO2 concentrations. Generally, the enzyme activities were highly correlated with each other. Irrespective of the level of CO2, short-term negative influence of chlorpyriphos was observed on soil enzymes till day 7 of spray. Knowledge obtained from this study highlights that the elevated CO2 may negatively influence persistence of pesticide but will have positive effects on soil enzyme activities.

Predictable bacterial composition and hydrocarbon degradation in Arctic soils following diesel and nutrient disturbance

Science.gov (United States)

Bell, Terrence H; Yergeau, Etienne; Maynard, Christine; Juck, David; Whyte, Lyle G; Greer, Charles W

2013-01-01

Increased exploration and exploitation of resources in the Arctic is leading to a higher risk of petroleum contamination. A number of Arctic microorganisms can use petroleum for growth-supporting carbon and energy, but traditional approaches for stimulating these microorganisms (for example, nutrient addition) have varied in effectiveness between sites. Consistent environmental controls on microbial community response to disturbance from petroleum contaminants and nutrient amendments across Arctic soils have not been identified, nor is it known whether specific taxa are universally associated with efficient bioremediation. In this study, we contaminated 18 Arctic soils with diesel and treated subsamples of each with monoammonium phosphate (MAP), which has successfully stimulated degradation in some contaminated Arctic soils. Bacterial community composition of uncontaminated, diesel-contaminated and diesel+MAP soils was assessed through multiplexed 16S (ribosomal RNA) rRNA gene sequencing on an Ion Torrent Personal Genome Machine, while hydrocarbon degradation was measured by gas chromatography analysis. Diversity of 16S rRNA gene sequences was reduced by diesel, and more so by the combination of diesel and MAP. Actinobacteria dominated uncontaminated soils with soils, and this pattern was exaggerated following disturbance. Degradation with and without MAP was predictable by initial bacterial diversity and the abundance of specific assemblages of Betaproteobacteria, respectively. High Betaproteobacteria abundance was positively correlated with high diesel degradation in MAP-treated soils, suggesting this may be an important group to stimulate. The predictability with which bacterial communities respond to these disturbances suggests that costly and time-consuming contaminated site assessments may not be necessary in the future. PMID:23389106

Fate of glyphosate and degradates in cover crop residues and underlying soil: A laboratory study

Energy Technology Data Exchange (ETDEWEB)

Cassigneul, A. [Université de Toulouse — École d' ingénieurs de Purpan, UMR 1248 AGIR — 75, Voie du TOEC BP 57 611, 31 076, Toulouse cedex 3 (France); INRA, UMR 1402 ECOSYS, 78850 Thiverval-Grignon (France); Benoit, P.; Bergheaud, V.; Dumeny, V.; Etiévant, V. [INRA, UMR 1402 ECOSYS, 78850 Thiverval-Grignon (France); Goubard, Y. [AgroParisTech, UMR 1402 ECOSYS, 78850 Thiverval-Grignon (France); Maylin, A. [Université de Toulouse — École d' ingénieurs de Purpan, UMR 1248 AGIR — 75, Voie du TOEC BP 57 611, 31 076, Toulouse cedex 3 (France); Justes, E. [INRA, UMR 1248 AGIR Auzeville — BP 52 627, 31 326, Castanet-Tolosan cedex (France); Alletto, L. [Université de Toulouse — École d' ingénieurs de Purpan, UMR 1248 AGIR — 75, Voie du TOEC BP 57 611, 31 076, Toulouse cedex 3 (France)

2016-03-01

The increasing use of cover crops (CC) may lead to an increase in glyphosate application for their destruction. Sorption and degradation of {sup 14}C-glyphosate on and within 4 decaying CC-amended soils were compared to its fate in a bare soil. {sup 14}C-Glyphosate and its metabolites distribution between mineralized, water-soluble, NH{sub 4}OH-soluble and non-extractable fractions was determined at 5 dates during a 20 °C/84-d period. The presence of CC extends {sup 14}C-glyphosate degradation half-life from 7 to 28 days depending on the CC. {sup 14}C-Glyphosate dissipation occurred mainly through mineralization in soils and through mineralization and bound residue formation in decaying CC. Differences in sorption and degradation levels were attributed to differences in composition and availability to microorganisms. CC- and soil-specific dissipation patterns were established with the help of explicit relationships between extractability and microbial activity. - Highlights: • Glyphosate sorption on cover crop residues increases with their decomposition degree. • Glyphosate degradation and mineralization are lower in mulch than in soil. • Nonextractable residue formation is one of the main dissipation pathways of glyphosate in cover crop mulch.

Fate of glyphosate and degradates in cover crop residues and underlying soil: A laboratory study

International Nuclear Information System (INIS)

Cassigneul, A.; Benoit, P.; Bergheaud, V.; Dumeny, V.; Etiévant, V.; Goubard, Y.; Maylin, A.; Justes, E.; Alletto, L.

2016-01-01

The increasing use of cover crops (CC) may lead to an increase in glyphosate application for their destruction. Sorption and degradation of "1"4C-glyphosate on and within 4 decaying CC-amended soils were compared to its fate in a bare soil. "1"4C-Glyphosate and its metabolites distribution between mineralized, water-soluble, NH_4OH-soluble and non-extractable fractions was determined at 5 dates during a 20 °C/84-d period. The presence of CC extends "1"4C-glyphosate degradation half-life from 7 to 28 days depending on the CC. "1"4C-Glyphosate dissipation occurred mainly through mineralization in soils and through mineralization and bound residue formation in decaying CC. Differences in sorption and degradation levels were attributed to differences in composition and availability to microorganisms. CC- and soil-specific dissipation patterns were established with the help of explicit relationships between extractability and microbial activity. - Highlights: • Glyphosate sorption on cover crop residues increases with their decomposition degree. • Glyphosate degradation and mineralization are lower in mulch than in soil. • Nonextractable residue formation is one of the main dissipation pathways of glyphosate in cover crop mulch.

Biophysical-and socioeconomic aspects of land degradation in the Guadalentin (SE-Spain): towards understanding and effective soil conservation

International Nuclear Information System (INIS)

Vente, J. de; Sole-Benet, A.; Boix-Fayos, C.; Nainggolan, D.; Romero-Diaz, A.

2009-01-01

Desertification and land degradation have been widely studied in the Guadalentin basin (SE Spain) through various national and international research projects. Most important identified degradation types are due to soil erosion, soil surface crusting, aridity, soil organic matter decline and salinisation. On the one hand, political and socioeconomic drivers have caused important land use and management changes, which have formed an important driver for further land degradation. On the other hand, soil conservation practice were initiated by the government and by individual land users, although there is very limited knowledge on their effectiveness. the objective of this work is to provide and overview of previous studies that addressed land degradation in the Guadalentin and to present an integrated synthesis of the main biophysical and socioeconomic factors identifies in these studies as being responsible for land degradation, with a focus on feasible soil conservation strategies. (Author) 18 refs.

Biophysical-and socioeconomic aspects of land degradation in the Guadalentin (SE-Spain): towards understanding and effective soil conservation

Energy Technology Data Exchange (ETDEWEB)

Vente, J. de; Sole-Benet, A.; Boix-Fayos, C.; Nainggolan, D.; Romero-Diaz, A.

2009-07-01

Desertification and land degradation have been widely studied in the Guadalentin basin (SE Spain) through various national and international research projects. Most important identified degradation types are due to soil erosion, soil surface crusting, aridity, soil organic matter decline and salinisation. On the one hand, political and socioeconomic drivers have caused important land use and management changes, which have formed an important driver for further land degradation. On the other hand, soil conservation practice were initiated by the government and by individual land users, although there is very limited knowledge on their effectiveness. the objective of this work is to provide and overview of previous studies that addressed land degradation in the Guadalentin and to present an integrated synthesis of the main biophysical and socioeconomic factors identifies in these studies as being responsible for land degradation, with a focus on feasible soil conservation strategies. (Author) 18 refs.

Degradation of biodegradable plastic mulch films in soil environment by phylloplane fungi isolated from gramineous plants.

Science.gov (United States)

Koitabashi, Motoo; Noguchi, Masako T; Sameshima-Yamashita, Yuka; Hiradate, Syuntaro; Suzuki, Ken; Yoshida, Shigenobu; Watanabe, Takashi; Shinozaki, Yukiko; Tsushima, Seiya; Kitamoto, Hiroko K

2012-08-02

To improve the biodegradation of biodegradable plastic (BP) mulch films, 1227 fungal strains were isolated from plant surface (phylloplane) and evaluated for BP-degrading ability. Among them, B47-9 a strain isolated from the leaf surface of barley showed the strongest ability to degrade poly-(butylene succinate-co-butylene adipate) (PBSA) and poly-(butylene succinate) (PBS) films. The strain grew on the surface of soil-mounted BP films, produced breaks along the direction of hyphal growth indicated that it secreted a BP-degrading enzyme, and has directly contributing to accelerating the degradation of film. Treatment with the culture filtrate decomposed 91.2 wt%, 23.7 wt%, and 14.6 wt% of PBSA, PBS, and commercially available BP polymer blended mulch film, respectively, on unsterlized soil within 6 days. The PCR-DGGE analysis of the transition of soil microbial community during film degradation revealed that the process was accompanied with drastic changes in the population of soil fungi and Acantamoeba spp., as well as the growth of inoculated strain B47-9. It has a potential for application in the development of an effective method for accelerating degradation of used plastics under actual field conditions.

Simulation of herbicide degradation in different soils by use of Pedo-transfer functions (PTF) and non-linear kinetics.

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von Götz, N; Richter, O

1999-03-01

The degradation behaviour of bentazone in 14 different soils was examined at constant temperature and moisture conditions. Two soils were examined at different temperatures. On the basis of these data the influence of soil properties and temperature on degradation was assessed and modelled. Pedo-transfer functions (PTF) in combination with a linear and a non-linear model were found suitable to describe the bentazone degradation in the laboratory as related to soil properties. The linear PTF can be combined with a rate related to the temperature to account for both soil property and temperature influence at the same time.

The Soil Program of the Restoration Seedbank Initiative: addressing knowledge gaps in degraded soils for use in dryland restoration

Science.gov (United States)

Muñoz-Rojas, Miriam; Bateman, Amber; Erickson, Todd E.; Turner, Shane; Merritt, David J.

2017-04-01

Global environmental changes and other anthropogenic impacts are rapidly transforming the structure and functioning of ecosystems worldwide. These changes are leading to land degradation with an estimated 25 % of the global land surface being affected. Landscape-scale restoration of these degraded ecosystems has therefore been recognised globally as an international priority. In the resource-rich biodiverse semi-arid Pilbara region of north-west Western Australia hundreds of thousands of hectares are disturbed due to established and emerging iron-ore mine operations. At this scale, the need to develop cost-effective large-scale solutions to restore these landscapes becomes imperative to preserve biodiversity and achieve functionality and sustainability of these ecosystems. The Restoration Seedbank Initiative (RSB) (http://www.plants.uwa.edu.au/ research/restoration-seedbank-initiative) is a five-year multidisciplinary research project that aims to build knowledge and design strategies to restore mine-impacted landscapes in the Pilbara and other arid and semi-arid landscapes worldwide (Kildiseheva et al., 2016). The RSB comprises four research programs that focus on seedbank management and curation, seed storage, seed enhancement, and the use of alternative soil substrates (soil or growing medium program) respectively. These multi-disciplinary programs address the significant challenges of landscape scale restoration in arid systems. In the soil program we follow an integrated approach that includes the characterization of undisturbed ecosystems, assessment of restored soils with the use of soil quality indicators, and design of alternative soil substrates to support the establishment of native plant communities. A series of glasshouse studies and field trials have been conducted in the last three years to advance our knowledge on soil limitations and to provide solutions to effectively overcome these challenges in arid ecosystem restoration. These studies include

Tributyltin induces mitochondrial fission through NAD-IDH dependent mitofusin degradation in human embryonic carcinoma cells.

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Yamada, Shigeru; Kotake, Yaichiro; Nakano, Mizuho; Sekino, Yuko; Kanda, Yasunari

2015-08-01

Organotin compounds, such as tributyltin (TBT), are well-known endocrine disruptors. TBT acts at the nanomolar level through genomic pathways via the peroxisome proliferator activated receptor (PPAR)/retinoid X receptor (RXR). We recently reported that TBT inhibits cell growth and the ATP content in the human embryonic carcinoma cell line NT2/D1 via a non-genomic pathway involving NAD(+)-dependent isocitrate dehydrogenase (NAD-IDH), which metabolizes isocitrate to α-ketoglutarate. However, the molecular mechanisms by which NAD-IDH mediates TBT toxicity remain unclear. In the present study, we evaluated the effects of TBT on mitochondrial NAD-IDH and energy production. Staining with MitoTracker revealed that nanomolar TBT levels induced mitochondrial fragmentation. TBT also degraded the mitochondrial fusion proteins, mitofusins 1 and 2. Interestingly, apigenin, an inhibitor of NAD-IDH, mimicked the effects of TBT. Incubation with an α-ketoglutarate analogue partially recovered TBT-induced mitochondrial dysfunction, supporting the involvement of NAD-IDH. Our data suggest that nanomolar TBT levels impair mitochondrial quality control via NAD-IDH in NT2/D1 cells. Thus, mitochondrial function in embryonic cells could be used to assess cytotoxicity associated with metal exposure.

Bioremediation of diuron contaminated soils by a novel degrading microbial consortium.

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Villaverde, J; Rubio-Bellido, M; Merchán, F; Morillo, E

2017-03-01

Diuron is a biologically active pollutant present in soil, water and sediments. It is persistent in soil, water and groundwater and slightly toxic to mammals and birds as well as moderately toxic to aquatic invertebrates. Its principal product of biodegradation, 3,4-dichloroaniline, exhibits a higher toxicity than diuron and is also persistent in the environment. On this basis, the objective of the study was to determine the potential capacity of a proposed novel diuron-degrading microbial consortium (DMC) for achieving not only diuron degradation, but its mineralisation both in solution as well as in soils with different properties. The consortium was tested in a soil solution where diuron was the only carbon source, and more than 98.8% of the diuron initially added was mineralised after only a few days. The consortium was composed of three diuron-degrading strains, Arthrobacter sulfonivorans, Variovorax soli and Advenella sp. JRO, the latter had been isolated in our laboratory from a highly contaminated industrial site. This work shows for the first time the potential capacity of a member of the genus Advenella to remediate pesticide-contaminated soils. However, neither of the three strains separately achieved mineralisation (ring- 14 C) of diuron in a mineral medium (MSM) with a trace nutrient solution (NS); combined in pairs, they mineralised 40% of diuron in solution, but the most relevant result was obtained in the presence of the three-member consortium, where complete diuron mineralisation was achieved after only a few days. In the presence of the investigated soils in suspension, the capacity of the consortium to mineralise diuron was evaluated, achieving mineralisation of a wide range of herbicides from 22.9 to 69.0%. Copyright © 2016 Elsevier Ltd. All rights reserved.

New strains of oil-degrading microorganisms for treating contaminated soils and wastes

Science.gov (United States)

Muratova, A. Yu; Panchenko, L. V.; Semina, D. V.; Golubev, S. N.; Turkovskaya, O. V.

2018-01-01

Two new strains Achromobacter marplatensis101n and Acinetobacter sp. S-33, capable of degrading 49 and 46% of oil within 7 days were isolated, identified, and characterized. The application of A. marplatensis 101n in combination with ammonium nitrate (100 mg·kg-1) for 30 days of cultivation resulted in the degradation of 49% of the initial total petroleum hydrocarbon content (274 g·kg-1) in the original highly acid (pH 4.9) oil-contaminated waste. Up to 30% of oil sludge added to a liquid mineral medium at a concentration of 15% was degraded after 10 days of cultivation of A. marplatensis 101n. Application of yellow alfalfa (Medicago falcata L.) plants with Acinetobacter sp. S-33 for bioremediation of oil-sludge-contaminated soil improved the quality of cleanup in comparison with the bacterium- or plant-only treatment. Inoculation of Acinetobacter sp. S-33 increased the growth of both roots and shoots by more than 40%, and positively influenced the soil microflora. We conclude that the new oil-degrading strains, Acinetobacter sp. S-33 and A. marplatensis 101n, can serve as the basis for new bioremediation agents for the treatment of oil contaminated soils and waste.

Comparative study of the selective degradations of two enantiomers in the racemate and an enriched concentration of indoxacarb in soils.

Science.gov (United States)

Zhang, Yu-Ping; Hu, De-Yu; Ling, Hu-Rong; Zhong, Lei; Huang, An-Xiang; Zhang, Kan-Kan; Song, Bao-An

2014-09-17

In this study, selective degradations of the two enantiomers of indoxacarb in the concentrate (2.33S/1R) and racemate (1S/1R) are examined. The absolute configurations of indoxacarb enantiomers were determined using X-ray diffraction. The results showed that in two alkaline soils, the S-(+)-indoxacarb was preferentially degraded in both the concentrate and racemate. In one acid soil, the two enantiomers degraded no-selectivity. In another acid soil and one neutral soil, the R-(-)-indoxacarb was preferentially degraded in both the concentrate and racemate. Indoxacarb enantiomers were configurationally stable in the five soils, and no interconversion was observed during the incubation. Because no significant difference in degradation was observed after samples were sterilized, the observed enantioselectivity may be attributed primarily to microbial activity in soils. The results indicate that the selective degradation behavior was the same for both formulations that were tested.

Indexing Permafrost Soil Organic Matter Degradation Using High-Resolution Mass Spectrometry.

Science.gov (United States)

Mann, Benjamin F; Chen, Hongmei; Herndon, Elizabeth M; Chu, Rosalie K; Tolic, Nikola; Portier, Evan F; Roy Chowdhury, Taniya; Robinson, Errol W; Callister, Stephen J; Wullschleger, Stan D; Graham, David E; Liang, Liyuan; Gu, Baohua

2015-01-01

Microbial degradation of soil organic matter (SOM) is a key process for terrestrial carbon cycling, although the molecular details of these transformations remain unclear. This study reports the application of ultrahigh resolution mass spectrometry to profile the molecular composition of SOM and its degradation during a simulated warming experiment. A soil sample, collected near Barrow, Alaska, USA, was subjected to a 40-day incubation under anoxic conditions and analyzed before and after the incubation to determine changes of SOM composition. A CHO index based on molecular C, H, and O data was utilized to codify SOM components according to their observed degradation potentials. Compounds with a CHO index score between -1 and 0 in a water-soluble fraction (WSF) demonstrated high degradation potential, with a highest shift of CHO index occurred in the N-containing group of compounds, while similar stoichiometries in a base-soluble fraction (BSF) did not. Additionally, compared with the classical H:C vs O:C van Krevelen diagram, CHO index allowed for direct visualization of the distribution of heteroatoms such as N in the identified SOM compounds. We demonstrate that CHO index is useful not only in characterizing arctic SOM at the molecular level but also enabling quantitative description of SOM degradation, thereby facilitating incorporation of the high resolution MS datasets to future mechanistic models of SOM degradation and prediction of greenhouse gas emissions.

Degradability studies of PLA nanocomposites under controlled water sorption and soil burial conditions

Science.gov (United States)

Norazlina, H.; Hadi, A. A.; Qurni, A. U.; Amri, M.; Mashelmie, S.; Kamal, Y.

2018-04-01

Polymer blended nanocomposites based on polylactic acid (PLA) were prepared via a simple melting process and investigated for its biodegradation behaviour. The treated CNTs were surface modified by using acid treatment and characterisations of composites were done by using Fourier Transform Infra-Red (FTIR) and UV-Vis. FTIR spectra and UV-Vis peak confirmed the surface modification of CNTs. The water uptake and weight loss behaviour based on CNTs and m-CNTs loading at different temperatures (25° and 45°C) were studied. It was found that the water absorption and weight loss of nanocomposites increased by the incorporation of CNTs and m-CNTs. Moisture induced degradation of composite samples was significant at elevated temperature. The addition of treated CNTs successfully reduced the water uptake and weight loss of nanocomposites due to less hydrolytic effect of water on nanocomposites. In soil burial test, the weight loss increases with addition of nanofiller. The loading of m-CNT reduced the ability of nanocomposites degradation.

Using the VS-Fast methodology for soil degradation assessment: a case study from Senegal

NARCIS (Netherlands)

Sonneveld, B.G.J.S.; McGarry, D.; Ndiaye, D.

2012-01-01

Soil degradation threatens sustainable food production and accelerates global warming. Poorer countries, whose agricultural sectors are highly dependent on their natural resource bases, are hit particularly hard by declining soil productivity. Calls for soil-quality monitoring are therefore,

PHYSICAL AND CHEMICAL DEGRADATION OF AGRICULTURAL SOILS AT SAN PEDRO LAGUNILLAS, NAYARIT

Directory of Open Access Journals (Sweden)

Gelacio Alejo Santiago

2012-08-01

Full Text Available The objective of this study was to evaluate the degradation to propose strategies for remediation and recovery of agricultural soils of San Pedro Lagunillas, Nayarit, Mexico; considering physical and chemical properties. Soils maintained with natural vegetation but slightly grazed and agricultural soils used for more than 20 years for the production of several crops, were compared. Eight sites were studied (four cultivated and four uncultivated, each agricultural lands (cultivated was located at a distance of 30 to 80 m from its counterpart or soil with natural vegetation (uncultivated. Samples were obtained from the following layers: 0 to 10, 10 to 20 and 20 to 30 cm. The variables evaluated were: particles smaller than 2 mm, pH, organic matter, extractable phosphorus, exchangeable potassium, calcium and magnesium; soil texture and water infiltration rate. An analysis of variance and Tukey means test (α = 0.05 was applied. It was concluded that traditional farming practices led to adverse changes in soil chemical properties, in the upper 20 cm soil layer. Physical properties were also affected because infiltration film and water infiltration rate decreased about 50% in cultivated soils. The overall results in this work evident the need to take appropriate measures to prevent the physical and chemical degradation of cultivated soils in order to preserve this resource and maintain their productivity.

Scopadulciol, Isolated from Scoparia dulcis, Induces β-Catenin Degradation and Overcomes Tumor Necrosis Factor-Related Apoptosis Ligand Resistance in AGS Human Gastric Adenocarcinoma Cells.

Science.gov (United States)

Fuentes, Rolly G; Toume, Kazufumi; Arai, Midori A; Sadhu, Samir K; Ahmed, Firoj; Ishibashi, Masami

2015-04-24

Scopadulciol (1), a scopadulan-type diterpenoid, was isolated from Scoparia dulcis along with three other compounds (2-4) by an activity-guided approach using the TCF reporter (TOP) luciferase-based assay system. A fluorometric microculture cytotoxicity assay (FMCA) revealed that compound 1 was cytotoxic to AGS human gastric adenocarcinoma cells. The treatment of AGS cells with 1 decreased β-catenin levels and also inhibited its nuclear localization. The pretreatment of AGS cells with a proteasome inhibitor, either MG132 or epoxomicin, protected against the degradation of β-catenin induced by 1. The 1-induced degradation of β-catenin was also abrogated in the presence of pifithrin-α, an inhibitor of p53 transcriptional activity. Compound 1 inhibited TOP activity in AGS cells and downregulated the protein levels of cyclin D1, c-myc, and survivin. Compound 1 also sensitized AGS cells to tumor necrosis factor-related apoptosis ligand (TRAIL)-induced apoptosis by increasing the levels of the death receptors, DR4 and DR5, and decreasing the level of the antiapoptotic protein Bcl-2. Collectively, our results demonstrated that 1 induced the p53- and proteasome-dependent degradation of β-catenin, which resulted in the inhibition of TCF/β-catenin transcription in AGS cells. Furthermore, 1 enhanced apoptosis in TRAIL-resistant AGS when combined with TRAIL.

Light induced degradation of phorbol esters.

Science.gov (United States)

Yunping, Bu; Ha, Bui Thi Ngoc; Eunice, Yeo; Chueng, Lo Loong; Yan, Hong

2012-10-01

Jatropha curcas (Jatropha) is a tropical shrub that is gaining popularity as a biofuel feedstock plant. Phorbol esters (PEs) are tetracyclic tiglian diterpenoids that are present in Jatropha seeds and other parts of plant. Epidermal cell irritating and cancer promoting PEs not only reduce commercial values of Jatropha seed cake but also cause some safety and environment concerns on PE leaching to soil. A simple bioassay of PE toxicity was conducted by incubating 48 h old brine shrimp (Artemia salina) nauplii with Jatropha oil for 24 h. 1-4% of Jatropha oil (corresponding to PE concentration of 25-100 mg L(-1)) had mortality rate of 5-95%, with LC50 estimated to be 2.7% of oil or 67 mg L(-1) of PE. Jatropha oil was incubated with clay or black soil (autoclaved or non-autoclaved) in the darkness or under sunlight for different periods of time before oil was re-extracted and tested for PE content by HPLC and for remaining toxicity with the brine shrimp bioassay. Under sunlight, PE decreased to non-detectable level within six days. Toxicity reduced to less than 5% mortality rate that is comparable to rapeseed oil control within the same period. In contrast, PE level and toxicity remained little changed when Jatropha oil was incubated in the darkness. Such PE degradation/detoxification was also found independent of the presence of soil or soil microorganisms. We conclude that sunlight directly degrades and detoxifies PEs and this finding should alleviate the concern on long term environmental impact of PE leaching. Copyright © 2012 Elsevier Inc. All rights reserved.

Study of aliphatic-aromatic copolyester degradation in sandy soil and its ecotoxicological impact.

Science.gov (United States)

Rychter, Piotr; Kawalec, Michał; Sobota, Michał; Kurcok, Piotr; Kowalczuk, Marek

2010-04-12

Degradation of poly[(1,4-butylene terephthalate)-co-(1,4-butylene adipate)] (Ecoflex, BTA) monofilaments (rods) in standardized sandy soil was investigated. Changes in the microstructure and chemical composition distribution of the degraded BTA samples were evaluated and changes in the pH and salinity of postdegradation soil, as well as the soil phytotoxicity impact of the degradation products, are reported. A macroscopic and microscopic evaluation of the surface of BTA rod samples after specified periods of incubation in standardized soil indicated erosion of the surface of BTA rods starting from the fourth month of their incubation, with almost total disintegration of the incubated BTA material observed after 22 months. However, the weight loss after this period of time was about 50% and only a minor change in the M(w) of the investigated BTA samples was observed, along with a slight increase in the dispersity (from an initial 2.75 up to 4.00 after 22 months of sample incubation). The multidetector SEC and ESI-MS analysis indicated retention of aromatic chain fragments in the low molar mass fraction of the incubated sample. Phytotoxicity studies revealed no visible damage, such as necrosis and chlorosis, or other inhibitory effects, in the following plants: radish, cres, and monocotyledonous oat, indicating that the degradation products of the investigated BTA copolyester are harmless to the tested plants.

Combined use of GIS and environmental indicators for assessment of chemical, physical and biological soil degradation in a Spanish Mediterranean region.

Science.gov (United States)

de Paz, José-Miguel; Sánchez, Juan; Visconti, Fernando

2006-04-01

Soil is one of the main non-renewable natural resources in the world. In the Valencian Community (Mediterranean coast of Spain), it is especially important because agriculture and forest biomass exploitation are two of the main economic activities in the region. More than 44% of the total area is under agriculture and 52% is forested. The frequently arid or semi-arid climate with rainfall concentrated in few events, usually in the autumn and spring, scarcity of vegetation cover, and eroded and shallow soils in several areas lead to soil degradation processes. These processes, mainly water erosion and salinization, can be intense in many locations within the Valencian Community. Evaluation of soil degradation on a regional scale is important because degradation is incompatible with sustainable development. Policy makers involved in land use planning require tools to evaluate soil degradation so they can go on to develop measures aimed at protecting and conserving soils. In this study, a methodology to evaluate physical, chemical and biological soil degradation in a GIS-based approach was developed for the Valencian Community on a 1/200,000 scale. The information used in this study was obtained from two different sources: (i) a soil survey with more than 850 soil profiles sampled within the Valencian Community, and (ii) the environmental information implemented in the Geo-scientific map of the Valencian Community digitised on an Arc/Info GIS. Maps of physical, chemical and biological soil degradation in the Valencian Community on a 1/200,000 scale were obtained using the methodology devised. These maps can be used to make a cost-effective evaluation of soil degradation on a regional scale. Around 29% of the area corresponding to the Valencian Community is affected by high to very high physical soil degradation, 36% by high to very high biological degradation, and 6% by high to very high chemical degradation. It is, therefore, necessary to draw up legislation and to

Delignification and Enhanced Gas Release from Soil Containing Lignocellulose by Treatment with Bacterial Lignin Degraders.

Science.gov (United States)

Rashid, Goran M M; Duran-Pena, Maria Jesus; Rahmanpour, Rahman; Sapsford, Devin; Bugg, Timothy D H

2017-04-10

The aim of the study was to isolate bacterial lignin-degrading bacteria from municipal solid waste soil, and to investigate whether they could be used to delignify lignocellulose-containing soil, and enhance methane release. A set of 20 bacterial lignin degraders, including 11 new isolates from municipal solid waste soil, were tested for delignification and phenol release in soil containing 1% pine lignocellulose. A group of 7 strains were then tested for enhancement of gas release from soil containing 1% lignocellulose in small-scale column tests. Using an aerobic pre-treatment, aerobic strains such as Pseudomonas putida showed enhanced gas release from the treated sample, but four bacterial isolates showed 5-10 fold enhancement in gas release in an in situ experiment under microanaerobic conditions: Agrobacterium sp., Lysinibacillus sphaericus, Comamonas testosteroni, and Enterobacter sp.. The results show that facultative anaerobic bacterial lignin degraders found in landfill soil can be used for in situ delignification and enhanced gas release in soil containing lignocellulose. The study demonstrates the feasibility of using an in situ bacterial treatment to enhance gas release and resource recovery from landfill soil containing lignocellulosic waste. This article is protected by copyright. All rights reserved. This article is protected by copyright. All rights reserved.

Degradation of soil fertility can cancel pollination benefits in sunflower.

Science.gov (United States)

Tamburini, Giovanni; Berti, Antonio; Morari, Francesco; Marini, Lorenzo

2016-02-01

Pollination and soil fertility are important ecosystem services to agriculture but their relative roles and potential interactions are poorly understood. We explored the combined effects of pollination and soil fertility in sunflower using soils from a trial characterized by different long-term input management in order to recreate plausible levels of soil fertility. Pollinator exclusion was used as a proxy for a highly eroded pollination service. Pollination benefits to yield depended on soil fertility, i.e., insect pollination enhanced seed set and yield only under higher soil fertility indicating that limited nutrient availability may constrain pollination benefits. Our study provides evidence for interactions between above- and belowground ecosystem services, highlighting the crucial role of soil fertility in supporting agricultural production not only directly, but also indirectly through pollination. Management strategies aimed at enhancing pollination services might fail in increasing yield in landscapes characterized by high soil service degradation. Comprehensive knowledge about service interactions is therefore essential for the correct management of ecosystem services in agricultural landscapes.

Calcitonin Gene-Related Peptide Induces HIV-1 Proteasomal Degradation in Mucosal Langerhans Cells.

Science.gov (United States)

Bomsel, Morgane; Ganor, Yonatan

2017-12-01

The neuroimmune dialogue between peripheral neurons and Langerhans cells (LCs) within mucosal epithelia protects against incoming pathogens. LCs rapidly internalize human immunodeficiency virus type 1 (HIV-1) upon its sexual transmission and then trans -infect CD4 + T cells. We recently found that the neuropeptide calcitonin gene-related peptide (CGRP), secreted mucosally from peripheral neurons, inhibits LC-mediated HIV-1 trans -infection. In this study, we investigated the mechanism of CGRP-induced inhibition, focusing on HIV-1 degradation in LCs and its interplay with trans -infection. We first show that HIV-1 degradation occurs in endolysosomes in untreated LCs, and functionally blocking such degradation with lysosomotropic agents results in increased trans -infection. We demonstrate that CGRP acts via its cognate receptor and at a viral postentry step to induce faster HIV-1 degradation, but without affecting the kinetics of endolysosomal degradation. We reveal that unexpectedly, CGRP shifts HIV-1 degradation from endolysosomes toward the proteasome, providing the first evidence for functional HIV-1 proteasomal degradation in LCs. Such efficient proteasomal degradation significantly inhibits the first phase of trans -infection, and proteasomal, but not endolysosomal, inhibitors abrogate CGRP-induced inhibition. Together, our results establish that CGRP controls the HIV-1 degradation mode in LCs. The presence of endogenous CGRP within innervated mucosal tissues, especially during the sexual response, to which CGRP contributes, suggests that HIV-1 proteasomal degradation predominates in vivo Hence, proteasomal, rather than endolysosomal, HIV-1 degradation in LCs should be enhanced clinically to effectively restrict HIV-1 trans -infection. IMPORTANCE During sexual transmission, HIV-1 is internalized and degraded in LCs, the resident antigen-presenting cells in mucosal epithelia. Yet during trans -infection, infectious virions escaping degradation are transferred

Effects of spent mushroom compost application on the physicochemical properties of a degraded soil

Directory of Open Access Journals (Sweden)

İ. Gümüş

2017-11-01

Full Text Available Under field and laboratory conditions, the application of organic amendments has generally shown an improvement in soil physicochemical properties. Here, spent mushroom compost (SMC is proposed as a suitable organic amendment for soil structure restoration. Our study assessed the impact of SMC on the physicochemical properties of a weak-structured and physically degraded soil. The approach involved the establishment of a pot experiment with SMC applications into soil (control, 0.5, 1, 2, 4 and 8 %. Soils were incubated at field capacity (−33 kPa for 21, 42, and 62 days under laboratory conditions. SMC applications into the soil significantly increased the aggregate stability (AS and decreased the modulus of rupture. The application of SMC at rates of 1, 2, 4, and 8 % significantly increased the total nitrogen and soil organic carbon contents of the degraded soil at all incubation periods (p < 0.05. The results obtained in this study indicate that the application of SMC can improve soil physicochemical properties, which may benefit farmers, land managers, and mushroom growers.

Effects of spent mushroom compost application on the physicochemical properties of a degraded soil

Science.gov (United States)

Gümüş, İlknur; Şeker, Cevdet

2017-11-01

Under field and laboratory conditions, the application of organic amendments has generally shown an improvement in soil physicochemical properties. Here, spent mushroom compost (SMC) is proposed as a suitable organic amendment for soil structure restoration. Our study assessed the impact of SMC on the physicochemical properties of a weak-structured and physically degraded soil. The approach involved the establishment of a pot experiment with SMC applications into soil (control, 0.5, 1, 2, 4 and 8 %). Soils were incubated at field capacity (-33 kPa) for 21, 42, and 62 days under laboratory conditions. SMC applications into the soil significantly increased the aggregate stability (AS) and decreased the modulus of rupture. The application of SMC at rates of 1, 2, 4, and 8 % significantly increased the total nitrogen and soil organic carbon contents of the degraded soil at all incubation periods (p < 0.05). The results obtained in this study indicate that the application of SMC can improve soil physicochemical properties, which may benefit farmers, land managers, and mushroom growers.

Hydrological character of the soil of a degraded area: comparison of analysis physical, chemical and floristic vegetational

Science.gov (United States)

Manfredi, Paolo; Cassinari, Chiara; Giupponi, Luca; Sichel, Giorgio Maria; Trevisan, Marco

2013-04-01

Extractor (Piastre di Richards): were carried out from water retention curves and calculated the values of percolating water (water circulation) and the useful water (maximum available water) were also determined physical and chemical parameters that most affect the hydrological characteristics of the soil such as texture, organic carbon, salinity and total limestone. The same soils were subjected to a floristic and vegetational analysis with relative comparison of the biological spectrum of the site with the spectra of other territories taken in comparison (Piacenza, Emilia Romagna, northern Italy, southern Italy). The 40% of the plants of the area is represented by Therophytes, species that are adapted to live in environments disturbed by human activities or climate. The high frequency of this species does not seem motivated either by the ombrothermic diagram elaborated with the help of the climatic data of the meteorological station of Piacenza, which was observed for a brief period the appearance of water deficit, neither linked to the interference from human activities which turns out to be low. Keywords: degraded soils, hydrological character, floristic vegetation analysis

From oil spills to barley growth - oil-degrading soil bacteria and their promoting effects.

Science.gov (United States)

Mikolasch, Annett; Reinhard, Anne; Alimbetova, Anna; Omirbekova, Anel; Pasler, Lisa; Schumann, Peter; Kabisch, Johannes; Mukasheva, Togzhan; Schauer, Frieder

2016-11-01

Heavy contamination of soils by crude oil is omnipresent in areas of oil recovery and exploitation. Bioremediation by indigenous plants in cooperation with hydrocarbon degrading microorganisms is an economically and ecologically feasible means to reclaim contaminated soils. To study the effects of indigenous soil bacteria capable of utilizing oil hydrocarbons on biomass production of plants growing in oil-contaminated soils eight bacterial strains were isolated from contaminated soils in Kazakhstan and characterized for their abilities to degrade oil components. Four of them, identified as species of Gordonia and Rhodococcus turned out to be effective degraders. They produced a variety of organic acids from oil components, of which 59 were identified and 7 of them are hitherto unknown acidic oil metabolites. One of them, Rhodococcus erythropolis SBUG 2054, utilized more than 140 oil components. Inoculating barley seeds together with different combinations of these bacterial strains restored normal growth of the plants on contaminated soils, demonstrating the power of this approach for bioremediation. Furthermore, we suggest that the plant promoting effect of these bacteria is not only due to the elimination of toxic oil hydrocarbons but possibly also to the accumulation of a variety of organic acids which modulate the barley's rhizosphere environment. © 2016 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Degradation of 14C-lindane in soils of planting ginseng

International Nuclear Information System (INIS)

Wang Zhengguo; Zhao Jing; Yao Jianren

1992-01-01

14 C-Lindane was used to study degradation of Lindane (γ-BHC) in different types of soil of planting ginseng. Results indicated that Lindane was very slowly mineralized after a 228 day's incubation period in closed system. It took about 9 years to completely mineralize Lindane in the chernozem, and 11 years in the brown calcareous at 20 ppm in the soils. In addition, the rate of Lindane mineralized depended on population and number of microorganism. In this test the fungi played more important role than the bacteria in the Lindane mineralization. 14 C-Lindane residues extracted from the soils were 77.43%-80.54%, and Lindane residues associated with the soils were 13.11%-20.77%

In-Field Spatial Variability in the Degradation of the Phenyl-Urea Herbicide Isoproturon Is the Result of Interactions between Degradative Sphingomonas spp. and Soil pH

Science.gov (United States)

Bending, Gary D.; Lincoln, Suzanne D.; Sørensen, Sebastian R.; Morgan, J. Alun W.; Aamand, Jens; Walker, Allan

2003-01-01

Substantial spatial variability in the degradation rate of the phenyl-urea herbicide isoproturon (IPU) [3-(4-isopropylphenyl)-1,1-dimethylurea] has been shown to occur within agricultural fields, with implications for the longevity of the compound in the soil, and its movement to ground- and surface water. The microbial mechanisms underlying such spatial variability in degradation rate were investigated at Deep Slade field in Warwickshire, United Kingdom. Most-probable-number analysis showed that rapid degradation of IPU was associated with proliferation of IPU-degrading organisms. Slow degradation of IPU was linked to either a delay in the proliferation of IPU-degrading organisms or apparent cometabolic degradation. Using enrichment techniques, an IPU-degrading bacterial culture (designated strain F35) was isolated from fast-degrading soil, and partial 16S rRNA sequencing placed it within the Sphingomonas group. Denaturing gradient gel electrophoresis (DGGE) of PCR-amplified bacterial community 16S rRNA revealed two bands that increased in intensity in soil during growth-linked metabolism of IPU, and sequencing of the excised bands showed high sequence homology to the Sphingomonas group. However, while F35 was not closely related to either DGGE band, one of the DGGE bands showed 100% partial 16S rRNA sequence homology to an IPU-degrading Sphingomonas sp. (strain SRS2) isolated from Deep Slade field in an earlier study. Experiments with strains SRS2 and F35 in soil and liquid culture showed that the isolates had a narrow pH optimum (7 to 7.5) for metabolism of IPU. The pH requirements of IPU-degrading strains of Sphingomonas spp. could largely account for the spatial variation of IPU degradation rates across the field. PMID:12571001

Isolation and Identification of Crude Oil Degrading and Biosurfactant Producing Bacteria from the Oil-Contaminated Soils of Gachsaran

Directory of Open Access Journals (Sweden)

Seyyedeh Zahra Hashemi

2016-03-01

Full Text Available Background and Objectives: Petroleum hydrocarbons are harmful to the environment, human health, and all other living creatures. Oil and its byproducts in contact with water block sunshine to phytoplanktons and thus break the food chain and damage the marine food source. This study aims to isolate the crude oil degrading and biosurfactant producing bacteria from the oil contaminated soils of Gachsaran, Iran. Materials and Methods: Isolation was performed in peptone-water medium with yeast extract. Oil displacement area, emulsification index and bacterial phylogeny using 16S rRNA analysis were studied. Results and Conclusion: Three isolates were able to degrade the crude oil. In the first day, there were two phases in the medium; after a few days, these three bacteria degraded the crude oil until there was only one phase left in the medium. One strain was selected as a superior strain by homogenizing until the medium became clear and transparent. This method confirmed that the strain produces biosurfactant. According to the morphological and biochemical tests, the strain isolated from the oil contaminated soils is a member of Bacillus subtilis, so to study the bacterial phylogeny and taxonomy of the strain, an analysis of 16S rRNA was carried out, and the phylogenic tree confirmed them. The results verified that oil contaminated soils are good source for isolation of the biosurfactant producing bacteria.

Construction and applications of DNA probes for detection of polychlorinated biphenyl-degrading genotypes in toxic organic-contaminated soil environments

International Nuclear Information System (INIS)

Walia, S.; Khan, A.; Rosenthal, N.

1990-01-01

Several DNA probes for polychlorinated biphenyl (PCB)-degrading genotypes were constructed from PCB-degrading bacteria. These laboratory-engineered DNA probes were used for the detection, enumeration, and isolation of specific bacteria degrading PCBs. Dot blot analysis of purified DNA from toxic organic chemical-contaminated soil bacterial communities showed positive DNA-DNA hybridization with a 32P-labeled DNA probe (pAW6194, cbpABCD). Less than 1% of bacterial colonies isolated from garden topsoil and greater than 80% of bacteria isolated from PCB-contaminated soils showed DNA homologies with 32P-labeled DNA probes. Some of the PCB-degrading bacterial isolates detected by the DNA probe method did not show biphenyl clearance. The DNA probe method was found to detect additional organisms with greater genetic potential to degrade PCBs than the biphenyl clearance method did. Results from this study demonstrate the usefulness of DNA probes in detecting specific PCB-degrading bacteria, abundance of PCB-degrading genotypes, and genotypic diversity among PCB-degrading bacteria in toxic chemical-polluted soil environments. We suggest that the DNA probe should be used with caution for accurate assessment of PCB-degradative capacity within soils and further recommend that a combination of DNA probe and biodegradation assay be used to determine the abundance of PCB-degrading bacteria in the soil bacterial community

Adsorption-desorption, mobility and degradation of 14C-Glyphosate in two soil series

International Nuclear Information System (INIS)

Ismail, B. S.; Zaifah Abdul Kadir; Khairiah Jusoh; Nashriyah Mat

2002-01-01

The adsorption desorption and degradation of glyphosate (Roundup) have been studied using 14 C glyphosate in two soils, namely Serdang Series and Sungai Buloh Series. The percentage of adsorption was not significantly different (p 14 C- glyphosate was detected in 0-10 cm zone of the two soils studied. However, in Sungai Buloh Series, a significant amount of 14 C-glyphosate was detected in the 10-20 cm zone. A small amount of 14 C radioactivity was also detected in the leachate of the two soils. The percentage of degradation in the Sungai Buloh and Serdang Series soils was higher at 10 μg/ml and 50 μg/ml, concentration, respectively. At 50 μg/ml concentration the Sungai Buloh Series soil showed higher glyphosate residue (83%) as compared to Serdang Series (48%). In contrast, the glyphosate residue was found to be higher in the Serdang Series (73916) as compared to the Sungai Buloh Series (30%) at 10 μg/ml concentration. (Author)

Impact of electrochemical treatment of soil washing solution on PAH degradation efficiency and soil respirometry.

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Mousset, Emmanuel; Huguenot, David; van Hullebusch, Eric D; Oturan, Nihal; Guibaud, Gilles; Esposito, Giovanni; Oturan, Mehmet A

2016-04-01

The remediation of a genuinely PAH-contaminated soil was performed, for the first time, through a new and complete investigation, including PAH extraction followed by advanced oxidation treatment of the washing solution and its recirculation, and an analysis of the impact of the PAH extraction on soil respirometry. The study has been performed on the remediation of genuine PAH-contaminated soil, in the following three steps: (i) PAH extraction with soil washing (SW) techniques, (ii) PAH degradation with an electro-Fenton (EF) process, and (iii) recirculation of the partially oxidized effluent for another SW cycle. The following criteria were monitored during the successive washing cycles: PAH extraction efficiency, PAH oxidation rates and yields, extracting agent recovery, soil microbial activity, and pH of soil. Two representative extracting agents were compared: hydroxypropyl-beta-cyclodextrin (HPCD) and a non-ionic surfactant, Tween(®) 80. Six PAH with different numbers of rings were monitored: acenaphthene (ACE), phenanthrene (PHE), fluoranthene (FLA), pyrene (PYR), benzo(a)pyrene (BaP), and benzo(g,h,i)perylene (BghiP). Tween(®) 80 showed much better PAH extraction efficiency (after several SW cycles) than HPCD, regardless of the number of washing cycles. Based on successive SW experiments, a new mathematical relation taking into account the soil/water partition coefficient (Kd*) was established, and could predict the amount of each PAH extracted by the surfactant with a good correlation with experimental results (R(2) > 0.975). More HPCD was recovered (89%) than Tween(®) 80 (79%), while the monitored pollutants were completely degraded (>99%) after 4 h and 8 h, respectively. Even after being washed with partially oxidized solutions, the Tween(®) 80 solutions extracted significantly more PAH than HPCD and promoted better soil microbial activity, with higher oxygen consumption rates. Moreover, neither the oxidation by-products nor the acidic media (p

Gut microbial degradation of organophosphate insecticides-induces glucose intolerance via gluconeogenesis.

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Velmurugan, Ganesan; Ramprasath, Tharmarajan; Swaminathan, Krishnan; Mithieux, Gilles; Rajendhran, Jeyaprakash; Dhivakar, Mani; Parthasarathy, Ayothi; Babu, D D Venkatesh; Thumburaj, Leishman John; Freddy, Allen J; Dinakaran, Vasudevan; Puhari, Shanavas Syed Mohamed; Rekha, Balakrishnan; Christy, Yacob Jenifer; Anusha, Sivakumar; Divya, Ganesan; Suganya, Kannan; Meganathan, Boominathan; Kalyanaraman, Narayanan; Vasudevan, Varadaraj; Kamaraj, Raju; Karthik, Maruthan; Jeyakumar, Balakrishnan; Abhishek, Albert; Paul, Eldho; Pushpanathan, Muthuirulan; Rajmohan, Rajamani Koushick; Velayutham, Kumaravel; Lyon, Alexander R; Ramasamy, Subbiah

2017-01-24

Organophosphates are the most frequently and largely applied insecticide in the world due to their biodegradable nature. Gut microbes were shown to degrade organophosphates and cause intestinal dysfunction. The diabetogenic nature of organophosphates was recently reported but the underlying molecular mechanism is unclear. We aimed to understand the role of gut microbiota in organophosphate-induced hyperglycemia and to unravel the molecular mechanism behind this process. Here we demonstrate a high prevalence of diabetes among people directly exposed to organophosphates in rural India (n = 3080). Correlation and linear regression analysis reveal a strong association between plasma organophosphate residues and HbA1c but no association with acetylcholine esterase was noticed. Chronic treatment of mice with organophosphate for 180 days confirms the induction of glucose intolerance with no significant change in acetylcholine esterase. Further fecal transplantation and culture transplantation experiments confirm the involvement of gut microbiota in organophosphate-induced glucose intolerance. Intestinal metatranscriptomic and host metabolomic analyses reveal that gut microbial organophosphate degradation produces short chain fatty acids like acetic acid, which induces gluconeogenesis and thereby accounts for glucose intolerance. Plasma organophosphate residues are positively correlated with fecal esterase activity and acetate level of human diabetes. Collectively, our results implicate gluconeogenesis as the key mechanism behind organophosphate-induced hyperglycemia, mediated by the organophosphate-degrading potential of gut microbiota. This study reveals the gut microbiome-mediated diabetogenic nature of organophosphates and hence that the usage of these insecticides should be reconsidered.

Impact of repeated two-phase olive mill waste application on phosphorus fractionation in a degraded olive grove soil

International Nuclear Information System (INIS)

Lopez-Pineiro, A.; Albarran, A.; Flores, S.; Rato, J. M.; Munoz, A.; Cabrera, D.; Pena, D.; Fernandez, S.

2009-01-01

Loss of organic matter is one of the main forms of soil degradation in Mediterranean agricultural soils, and external sources of organic matter are required to improve soil properties. the two-phase centrifugation system in the olive-oil extraction industry produces a large amount of olive mill waste sludge (TPOMW) which can be used to add organic C to degraded soils. (Author)

Three-year study of fast-growing trees in degraded soils amended with composts: Effects on soil fertility and productivity.

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Madejón, Paula; Alaejos, Joaquin; García-Álbala, José; Fernández, Manuel; Madejón, Engracia

2016-03-15

Currently, worries about the effects of intensive plantations on long-term nutrient supply and a loss of productivity have risen. In this study two composts were added to degraded soils where this type of intensive crops were growing, to avoid the soil fertility decrease and try to increase biomass production. For the experiment, two degraded soils in terms of low organic carbon content and low pH were selected in South-West Spain: La Rábida (RA) and Villablanca (VI) sites. Both study sites were divided into 24 plots. In RA, half of the plots were planted with Populus x canadensis "I-214"; the other half was planted with Eucalyptus globulus. At the VI site, half of the plots were planted with Paulownia fortunei, and the other plots were planted with Eucalyptus globulus. For each tree and site, three treatments were established (two organic composts and a control without compost), with four replications per treatment. The organic amendments were "alperujo" compost, AC, a solid by-product from the extraction of olive oil, and BC, biosolid compost. During the three years of experimentation, samples of soils and plants were analyzed for studying chemical and biochemical properties of soil, plant growth and plant nutritional status and biomass production. The composts increased total organic carbon, water-soluble carbon, nutrients and pH of soil only in the most acidic soil. Soil biochemical quality was calculated with the geometric mean of the enzymatic activities (Dehydrogenase, β-glucosidase, Phosphatase and Urease activities) determined in soils. The results showed a beneficial improvement in comparison with soils without compost. However, the best results were found in the growth and biomass production of the studied trees, especially in Eucalyptus. Nutritional levels of leaves of the trees were, in general, in the normal established range for each species, although no clear effect of the composts was observed. The results of this study justify the addition of

Prolyl hydroxylation regulates protein degradation, synthesis, and splicing in human induced pluripotent stem cell-derived cardiomyocytes.

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Stoehr, Andrea; Yang, Yanqin; Patel, Sajni; Evangelista, Alicia M; Aponte, Angel; Wang, Guanghui; Liu, Poching; Boylston, Jennifer; Kloner, Philip H; Lin, Yongshun; Gucek, Marjan; Zhu, Jun; Murphy, Elizabeth

2016-06-01

Protein hydroxylases are oxygen- and α-ketoglutarate-dependent enzymes that catalyse hydroxylation of amino acids such as proline, thus linking oxygen and metabolism to enzymatic activity. Prolyl hydroxylation is a dynamic post-translational modification that regulates protein stability and protein-protein interactions; however, the extent of this modification is largely uncharacterized. The goals of this study are to investigate the biological consequences of prolyl hydroxylation and to identify new targets that undergo prolyl hydroxylation in human cardiomyocytes. We used human induced pluripotent stem cell-derived cardiomyocytes in combination with pulse-chase amino acid labelling and proteomics to analyse the effects of prolyl hydroxylation on protein degradation and synthesis. We identified 167 proteins that exhibit differences in degradation with inhibition of prolyl hydroxylation by dimethyloxalylglycine (DMOG); 164 were stabilized. Proteins involved in RNA splicing such as serine/arginine-rich splicing factor 2 (SRSF2) and splicing factor and proline- and glutamine-rich (SFPQ) were stabilized with DMOG. DMOG also decreased protein translation of cytoskeletal and sarcomeric proteins such as α-cardiac actin. We searched the mass spectrometry data for proline hydroxylation and identified 134 high confidence peptides mapping to 78 unique proteins. We identified SRSF2, SFPQ, α-cardiac actin, and cardiac titin as prolyl hydroxylated. We identified 29 prolyl hydroxylated proteins that showed a significant difference in either protein degradation or synthesis. Additionally, we performed next-generation RNA sequencing and showed that the observed decrease in protein synthesis was not due to changes in mRNA levels. Because RNA splicing factors were prolyl hydroxylated, we investigated splicing ± inhibition of prolyl hydroxylation and detected 369 alternative splicing events, with a preponderance of exon skipping. This study provides the first extensive

Inacessible Andean sites reveal land-use induced stabilisation of soil organic carbon

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Heitkamp, Felix; Maqsood, Shafique; Sylvester, Steven; Kessler, Michael; Jungkunst, Hermann

2015-04-01

Human activity affects properties and development of ecosystems across the globe to such a degree that it is challenging to get baseline values for undisturbed ecosystems. This is especially true for soils, which are affected by land-use history and hold a legacy of past human interventions. Therefore, it is still largely unknown how soil would have developed "naturally" and if processes of organic matter stabilisation would be different in comparison to managed soils. Here, we show undisturbed soil development, i.e., the processes of weathering and accumulation of soil organic carbon (SOC), by comparing pristine with grazed sites in the high Andes (4500 m) of southern Peru. We located study plots on a large ledge (0.2 km²) that is only accessible with mountaineering equipment. Plots with pristine vegetation were compared to rangeland plots that were constantly under grazing management for at least four millennia. All "state factors"; climate, potential biota, topography, parent material and time; besides "land-use" were, therefore, identical. Vegetation change, induced by grazing management, led to lower vegetation cover of the soil, thereby increasing soil surface temperatures and soil acidification. Both factors increased weathering in rangeland soils, as indicated by the presence of pedogenic oxides, especially amorphous Al-(oxy)hydroxides (oxalate-extractable Al). Higher losses of base cations (K, Na, Ca) and lower pH-values were related to a low base saturation of exchange sites in rangelands. Therefore, rangeland soils were classified as Umbrisol, whereas soils under pristine vegetation were classified as Phaeozeme. All profiles were rich in SOC (100 to 126 g kg-1) with no significant differences in concentrations or stocks. SOC of rangeland soils was, however, less available for microorganisms (proportion of microbial C on SOC: 1.8 vs. 0.6% in pristine and rangeland soils, respectively) and showed higher stability against thermal degradation. Reasons for

Experimental evidence and modelling of drought induced alternative stable soil moisture states

Science.gov (United States)

Robinson, David; Jones, Scott; Lebron, Inma; Reinsch, Sabine; Dominguez, Maria; Smith, Andrew; Marshal, Miles; Emmett, Bridget

2017-04-01

The theory of alternative stable states in ecosystems is well established in ecology; however, evidence from manipulation experiments supporting the theory is limited. Developing the evidence base is important because it has profound implications for ecosystem management. Here we show evidence of the existence of alternative stable soil moisture states induced by drought in an upland wet heath. We used a long-term (15 yrs) climate change manipulation experiment with moderate sustained drought, which reduced the ability of the soil to retain soil moisture by degrading the soil structure, reducing moisture retention. Moreover, natural intense droughts superimposed themselves on the experiment, causing an unexpected additional alternative soil moisture state to develop, both for the drought manipulation and control plots; this impaired the soil from rewetting in winter. Our results show the coexistence of three stable states. Using modelling with the Hydrus 1D software package we are able to show the circumstances under which shifts in soil moisture states are likely to occur. Given the new understanding it presents a challenge of how to incorporate feedbacks, particularly related to soil structure, into soil flow and transport models?

Biofuel components change the ecology of bacterial volatile petroleum hydrocarbon degradation in aerobic sandy soil

International Nuclear Information System (INIS)

Elazhari-Ali, Abdulmagid; Singh, Arvind K.; Davenport, Russell J.; Head, Ian M.; Werner, David

2013-01-01

We tested the hypothesis that the biodegradation of volatile petroleum hydrocarbons (VPHs) in aerobic sandy soil is affected by the blending with 10 percent ethanol (E10) or 20 percent biodiesel (B20). When inorganic nutrients were scarce, competition between biofuel and VPH degraders temporarily slowed monoaromatic hydrocarbon degradation. Ethanol had a bigger impact than biodiesel, reflecting the relative ease of ethanol compared to methyl ester biodegradation. Denaturing gradient gel electrophoresis (DGGE) of bacterial 16S rRNA genes revealed that each fuel mixture selected for a distinct bacterial community, each dominated by Pseudomonas spp. Despite lasting impacts on soil bacterial ecology, the overall effects on VHP biodegradation were minor, and average biomass yields were comparable between fuel types, ranging from 0.40 ± 0.16 to 0.51 ± 0.22 g of biomass carbon per gram of fuel carbon degraded. Inorganic nutrient availability had a greater impact on petroleum hydrocarbon biodegradation than fuel composition. Highlights: ► The effect of 10% ethanol or 20% biodiesel on the biodegradability of volatile petroleum hydrocarbons in soil was investigated. ► Competition for scarce inorganic nutrients between biofuel and VPH degraders slowed monoaromatic hydrocarbon degradation. ► Biofuel effects were transitional. ► Each fuel selected for a distinct predominant bacterial community. ► All bacterial communities were dominated by Pseudomonas spp. - Blending of petroleum with ethanol or biodiesel changes the fuel degrading soil bacterial community structure, but the long-term effects on fuel biodegradability are minor.

Bioremediation of PAH-contamined soils: Consequences on formation and degradation of polar-polycyclic aromatic compounds and microbial community abundance.

Science.gov (United States)

Biache, Coralie; Ouali, Salma; Cébron, Aurélie; Lorgeoux, Catherine; Colombano, Stéfan; Faure, Pierre

2017-05-05

A bioslurry batch experiment was carried out over five months on three polycyclic aromatic compound (PAC) contaminated soils to study the PAC (PAH and polar-PAC) behavior during soil incubation and to evaluate the impact of PAC contamination on the abundance of microbial communities and functional PAH-degrading populations. Organic matter characteristics and reactivity, assessed through solvent extractable organic matter and PAC contents, and soil organic matter mineralization were monitored during 5 months. Total bacteria and fungi, and PAH-ring hydroxylating dioxygenase genes were quantified. Results showed that PAHs and polar-PACs were degraded with different degradation dynamics. Differences in degradation rates were observed among the three soils depending on PAH distribution and availability. Overall, low molecular weight compounds were preferentially degraded. Degradation selectivity between isomers and structurally similar compounds was observed which could be used to check the efficiency of bioremediation processes. Bacterial communities were dominant over fungi and were most likely responsible for PAC degradation. Abundance of PAH-degrading bacteria increased during incubations, but their proportion in the bacterial communities tended to decrease. The accumulation of some oxygenated-PACs during the bioslurry experiment underlines the necessity to monitor these compounds during application of remediation treatment on PAH contaminated soils. Copyright © 2017 Elsevier B.V. All rights reserved.

Fate of sulfur mustard on soil: Evaporation, degradation, and vapor emission.

Science.gov (United States)

Jung, Hyunsook; Kah, Dongha; Chan Lim, Kyoung; Lee, Jin Young

2017-01-01

After application of sulfur mustard to the soil surface, its possible fate via evaporation, degradation following absorption, and vapor emission after decontamination was studied. We used a laboratory-sized wind tunnel, thermal desorber, gas chromatograph-mass spectrometry (GC-MS), and 13 C nuclear magnetic resonance ( 13 C NMR) for systematic analysis. When a drop of neat HD was deposited on the soil surface, it evaporated slowly while being absorbed immediately into the matrix. The initial evaporation or drying rates of the HD drop were found to be power-dependent on temperature and initial drop volume. Moreover, drops of neat HD, ranging in size from 1 to 6 μL, applied to soil, evaporated at different rates, with the smaller drops evaporating relatively quicker. HD absorbed into soil remained for a month, degrading eventually to nontoxic thiodiglycol via hydrolysis through the formation of sulfonium ions. Finally, a vapor emission test was performed for HD contaminant after a decontamination process, the results of which suggest potential risk from the release of trace chemical quantities of HD into the environment. Copyright © 2016 Elsevier Ltd. All rights reserved.

Study on kinetic degradation in soil and horizontal transfer of bt gene by 35S isotopic tracing method

International Nuclear Information System (INIS)

Wang Haiyan; Zhang Yanfei; Ye Qingfu

2012-01-01

In this study, 35 S isotopic tracing method was applied to investigate kinetic degradation of bt gene from Bt transgenic rice TT51 in two different soil and possibility of its horizontal transfer into soil bacteria as well. Results showed that, during 30 d of aerobic incubation, it was indicated that 35 S-Bt gene was not horizontally transferred into soil microorganisms. The aerobic soil degradation dynamics significantly followed a first-order dissipation pattern for bt gene. After 30 d of incubation, the amount of bt gene reached 9.32% of applied radioactivity for the fluvio-marine yellow loamy soil and 9.92% for the fluvio-aquatic soil, respectively. The half-lives in two soils were 3.53 d for the former soil and 5. 77 d for the latter soil, which means that bt gene was more easily degradable in the weak acidic soil. The use of 35 S labeling proved to be valuable; it served the purpose of validating the rigorousness of experimental protocols, and provided insights into the soil environmental safety assessment for Bt transgenic rice. (authors)

WSB1 overcomes oncogene-induced senescence by targeting ATM for degradation

Science.gov (United States)

Kim, Jung Jin; Lee, Seung Baek; Yi, Sang-Yeop; Han, Sang-Ah; Kim, Sun-Hyun; Lee, Jong-Min; Tong, Seo-Yun; Yin, Ping; Gao, Bowen; Zhang, Jun; Lou, Zhenkun

2017-01-01

Oncogene-induced senescence (OIS) or apoptosis through the DNA-damage response is an important barrier of tumorigenesis. Overcoming this barrier leads to abnormal cell proliferation, genomic instability, and cellular transformation, and finally allows cancers to develop. However, it remains unclear how the OIS barrier is overcome. Here, we show that the E3 ubiquitin ligase WD repeat and SOCS box-containing protein 1 (WSB1) plays a role in overcoming OIS. WSB1 expression in primary cells helps the bypass of OIS, leading to abnormal proliferation and cellular transformation. Mechanistically, WSB1 promotes ATM ubiquitination, resulting in ATM degradation and the escape from OIS. Furthermore, we identify CDKs as the upstream kinase of WSB1. CDK-mediated phosphorylation activates WSB1 by promoting its monomerization. In human cancer tissue and in vitro models, WSB1-induced ATM degradation is an early event during tumorigenic progression. We suggest that WSB1 is one of the key players of early oncogenic events through ATM degradation and destruction of the tumorigenesis barrier. Our work establishes an important mechanism of cancer development and progression in premalignant lesions. PMID:27958289

Predictable bacterial composition and hydrocarbon degradation in Arctic soils following diesel and nutrient disturbance.

Science.gov (United States)

Bell, Terrence H; Yergeau, Etienne; Maynard, Christine; Juck, David; Whyte, Lyle G; Greer, Charles W

2013-06-01

Increased exploration and exploitation of resources in the Arctic is leading to a higher risk of petroleum contamination. A number of Arctic microorganisms can use petroleum for growth-supporting carbon and energy, but traditional approaches for stimulating these microorganisms (for example, nutrient addition) have varied in effectiveness between sites. Consistent environmental controls on microbial community response to disturbance from petroleum contaminants and nutrient amendments across Arctic soils have not been identified, nor is it known whether specific taxa are universally associated with efficient bioremediation. In this study, we contaminated 18 Arctic soils with diesel and treated subsamples of each with monoammonium phosphate (MAP), which has successfully stimulated degradation in some contaminated Arctic soils. Bacterial community composition of uncontaminated, diesel-contaminated and diesel+MAP soils was assessed through multiplexed 16S (ribosomal RNA) rRNA gene sequencing on an Ion Torrent Personal Genome Machine, while hydrocarbon degradation was measured by gas chromatography analysis. Diversity of 16S rRNA gene sequences was reduced by diesel, and more so by the combination of diesel and MAP. Actinobacteria dominated uncontaminated soils with diesel degradation in MAP-treated soils, suggesting this may be an important group to stimulate. The predictability with which bacterial communities respond to these disturbances suggests that costly and time-consuming contaminated site assessments may not be necessary in the future.

Addition of residues and reintroduction of microorganisms in Jatropha curcas cultivated in degraded soil

Directory of Open Access Journals (Sweden)

Adriana A. Santos

2016-04-01

Full Text Available ABSTRACT The aim of this study was to evaluate, through mycorrhization (root colonization and number of spores of arbuscular mycorrhizal fungi - AMF, leaf acid phosphatase and soil chemical characteristics, the effects of the addition of residues (macrophytes and ash, hydrogel and the reintroduction of microorganisms in a degraded area cultivated with jatropha. Degradation occurred when the surface soil was removed during the construction of a hydroelectric power plant. The experiment was set in a randomized block design, using a 2 x 2 x 4 factorial scheme, i.e., two inoculation treatments (with and without soil-inoculum, two hydrogel treatments (with and without and four with the addition of residues (macrophytes - MAC, ash, MAC + ash and control, without residues applied in the planting hole, with 4 replicates and 5 plants in each replicate. Soil from preserved Cerrado area was used as a source of microorganisms, including AMF. The conclusion is that, after 12 months of planting, the hydrogel increased root colonization, while the chemical characteristics of the degraded soil responded positively to the addition of MAC and MAC + ash, with increase in pH and SB and reduction of Al and H + Al. The addition of the soil-inoculum, along with MAC and MAC + ash, promoted higher mycorrhizal colonization and number of spores and reduced amounts of leaf acid phosphatase, indicating increased absorption of P by the host.

Comparison of an ability to degrade MTBE between mixed culture and monoculture isolated from gasoline contaminated soil

Directory of Open Access Journals (Sweden)

Wanpen Virojanakud

2004-02-01

Full Text Available Methyl tertiary butyl ether (MTBE is an oxygenated compound used to enhance the octane index of gasoline and replace lead in gasoline. MTBE can reduce air pollution but causes water pollution due to its high water solubility and low sorption to soil and thus can easily contaminate the environment. Biodegradation is one of the promising techniques to reduce MTBE contaminated in the environment and MTBE degrader was proposed as an efficient method used to degrade MTBE. In this study, MTBE degraders were isolated from gasoline contaminated soil and then were evaluated with the hypothesis that MTBE degraders could improve biodegradation of MTBE in soil and mixed culture could degrade MTBE more rapidly than monoculture. Gasoline contaminated soil samples were taken from retail gas stations and a motorcycle repair shop in Khon Kaen University. Isolation of MTBE degrader was conducted by using Basal Salt Medium (BSM containing 200 mg/L of MTBE as a carbon source. Mixed culture of MTBE degrader was successfully isolated under aerobic condition. Morphology study was conducted by streaking isolated mixed culture in solid medium, agar slant and identifying the cells shape under a microscope. It was found that this mixed culture was a gram negative bacteria with 7 different isolates. A comparison of the ability to degrade MTBE between mixed culture and monoculture was investigated in BSM containing 100 mg/L of MTBE. The results indicated that a mixed culture degraded MTBE more rapidly than monoculture i.e. 20% within 14 days. Monoculture, J4 and J7, were the most rapid MTBE degraders among the other monocultures in which they degraded 14% of MTBE in 14 days while monoculture J15 could degrade only 1% of MTBE.This preliminary result suggests that mixed cultures degrade MTBE more efficiently than monoculture.

Effect of cropping cycles and repeated herbicide applications on the degradation of diclofop-methyl, bentazone, diuron, isoproturon and pendimethalin in soil.

Science.gov (United States)

Piutti, Séverine; Marchand, Anne-Laure; Lagacherie, Bernard; Martin-Laurent, Fabrice; Soulas, Guy

2002-03-01

A greenhouse study was conducted to investigate the ability of four crops (wheat, corn, oilseed rape and soybean) to influence the degradation of bentazone, diclofop-methyl, diuron, isoproturon and pendimethalin in soil. The present study showed that microbial biomass-carbon was significantly higher in planted soils than in bulk soil, especially with wheat and corn, after several cropping cycles. The biomass in corn and soybean planted soils was adversely affected by bentazone but recovered after three cropping cycles. In wheat-planted soils, diclofop-methyl application resulted in persistent increase of the amount of microbial biomass. Bentazone did not show accelerated degradation even after five successive treatments, differing from diclofop-methyl, for which two applications were sufficient to enhance significantly its rate of degradation. Enhanced degradation of diclofop-methyl was even more pronounced in wheat-planted soil. The rates of mineralisation of diuron, isoproturon and pendimethalin were not affected after the first cropping cycle, but were significantly increased in planted soils after five cropping cycles. The results confirm that plants may promote pesticide degradation in soil by stimulating biodegradation processes. In the case of diclofop-methyl, stimulation of accelerated degradation was observed.

Biological degradation of triclocarban and triclosan in a soil under aerobic and anaerobic conditions and comparison with environmental fate modelling

International Nuclear Information System (INIS)

Ying Guangguo; Yu Xiangyang; Kookana, Rai S.

2007-01-01

Triclocarban and triclosan are two antimicrobial agents widely used in many personal care products. Their biodegradation behaviour in soil was investigated by laboratory degradation experiments and environmental fate modelling. Quantitative structure-activity relationship (QSAR) analyses showed that triclocarban and triclosan had a tendency to partition into soil or sediment in the environment. Fate modelling suggests that either triclocarban or triclosan 'does not degrade fast' with its primary biodegradation half-life of 'weeks' and ultimate biodegradation half-life of 'months'. Laboratory experiments showed that triclocarban and triclosan were degraded in the aerobic soil with half-life of 108 days and 18 days, respectively. No negative effect of these two antimicrobial agents on soil microbial activity was observed in the aerobic soil samples during the experiments. But these two compounds persisted in the anaerobic soil within 70 days of the experimental period. - Triclocarban and triclosan can be degraded by microbial processes in aerobic soil, but will persist in anaerobic soil

Biological degradation of triclocarban and triclosan in a soil under aerobic and anaerobic conditions and comparison with environmental fate modelling

Energy Technology Data Exchange (ETDEWEB)

Guangguo, Ying [State Key Laboratory of Organic Geochemistry, Guangzhou Institute of Geochemistry, Chinese Academy of Sciences, Guangzhou 510640 (China); CSIRO Land and Water, Adelaide Laboratory, PMB2, Glen Osmond SA 5064 (Australia)], E-mail: guang-guo.ying@gig.ac.cn; Xiangyang, Yu [CSIRO Land and Water, Adelaide Laboratory, PMB2, Glen Osmond SA 5064 (Australia); Food Safety Research Institute, Jiangsu Academy of Agricultural Sciences, Nanjing 210014 (China); Kookana, Rai S [CSIRO Land and Water, Adelaide Laboratory, PMB2, Glen Osmond SA 5064 (Australia)

2007-12-15

Triclocarban and triclosan are two antimicrobial agents widely used in many personal care products. Their biodegradation behaviour in soil was investigated by laboratory degradation experiments and environmental fate modelling. Quantitative structure-activity relationship (QSAR) analyses showed that triclocarban and triclosan had a tendency to partition into soil or sediment in the environment. Fate modelling suggests that either triclocarban or triclosan 'does not degrade fast' with its primary biodegradation half-life of 'weeks' and ultimate biodegradation half-life of 'months'. Laboratory experiments showed that triclocarban and triclosan were degraded in the aerobic soil with half-life of 108 days and 18 days, respectively. No negative effect of these two antimicrobial agents on soil microbial activity was observed in the aerobic soil samples during the experiments. But these two compounds persisted in the anaerobic soil within 70 days of the experimental period. - Triclocarban and triclosan can be degraded by microbial processes in aerobic soil, but will persist in anaerobic soil.

Sensitivity of mountain ecosystems to human-accelerated soil erosion. Contrasting geomorphic response between tropical and semi-arid ecosystems.

Science.gov (United States)

Vanacker, Veerle; Bellin, Nicolas; Schoonejans, Jerome; Molina, Armando; Kubik, Peter W.

2014-05-01

Human-induced land cover changes are causing important adverse effects on the ecological services rendered by mountain ecosystems, and the number of case-studies of the impact of humans on soil erosion and sediment yield has mounted rapidly. A modelling framework that is specifically adapted to mountain environments is currently lacking. Most studies make use of general river basin models that were originally parameterized and calibrated for temperate, low relief landscapes. Transposing these modelling concepts directly to steep environments with shallow and stony soils often leads to unrealistic model predictions, as model input parameters are rarely calibrated for the range of environmental conditions found in mountain regions. Here, we present a conceptual model that evaluates erosion regulation as a function of human disturbances in vegetation cover. The basic idea behind this model is that soil erosion mechanisms are independent of human impact, but that the frequency-magnitude distributions of erosion rates change as a response to human disturbances. Pre-disturbance (or natural) erosion rates are derived from in-situ produced 10Be concentrations in river sediment, while post-disturbance (or modern) erosion rates are derived from sedimentation rates in small catchments. In its simplicity, the model uses vegetation cover change as a proxy of human disturbance in a given vegetation system. The model is then calibrated with field measurements from two mountainous sites with strongly different vegetation dynamics, climatic and geological settings: the Tropical Andes, and the Spanish Betic Cordillera. Natural erosion processes are important in mountainous sites, and natural erosion benchmarks are primordial to assess human-induced changes in erosion rates. While the Spanish Betic Cordillera is commonly characterized as a degraded landscape, there is no significant change in erosion due to human disturbance for uncultivated sites. The opposite is true for the

Degradation of sustainable mulch materials in two types of soil under laboratory conditions

Science.gov (United States)

Villena, Jaime; González, Sara; Moreno, Carmen; Aceituno, Patricia; Campos, Juan; Meco, Ramón; María Moreno, Marta

2017-04-01

Mulching is a technique used in cultivation worldwide, especially for vegetable crops, for reducing weed growth, minimising or eliminating soil erosion, and often for enhancing total yields. Manufactured plastic films, mainly polyethylene (PE), have been widely used for this purpose due to their excellent mechanical properties, light weight and relatively low prices in recent years. However, the use of PE is associated with serious environmental problems related to its petrochemical origin and its long shelf-life, which causes a waste problem in our crop fields. For this reason, the use of biodegradable mulch materials (biopolymers and papers) as alternative to PE is increasing nowadays, especially in organic farming. However, these materials can suffer an undesirable early degradation (and therefore not fulfilling their function successfully), greatly resulting from the type of soil. For this reason, this study aimed to analyse the degradation pattern of different mulch materials buried in two types of soils, clay and sand, under laboratory conditions (25°C, dark surroundings, constant humidity). The mulch materials used were: 1) black polyethylene (15 µm); black biopolymers (15 µm): 2) maize starch-based, 3) potato starch-based, 4) polylactic acid-based, 5) black paper, 85 g/m2. Periodically (every 15-20 days), the weight and surface loss of the different materials were recorded. The results indicate that mulch degradation was earlier and higher in the clay soil, especially in the paper and in the potato starch-based materials, followed by the maize starch-based mulch, while polylactic acid-based suffered the least and the latest degradation. Keywords: mulch, biodegradable, biopolymer, paper, degradation. Acknowledgements: the research was funded by Project RTA2011-00104-C04-03 from the INIA (Spanish Ministry of Economy and Competitiveness).

Catalytic degradation of the soil fumigant 1,3-dichloropropene in aqueous biochar slurry

Energy Technology Data Exchange (ETDEWEB)

Qin, Jiaolong [School of Agriculture and Biology, Shanghai Jiao Tong University, 800 Dongchuan Road, Shanghai 200240 (China); Cheng, Yuxiao; Sun, Mingxing [Shanghai Entry–Exit Inspection and Quarantine Bureau, Shanghai 200135 (China); Yan, Lili [School of Agriculture and Biology, Shanghai Jiao Tong University, 800 Dongchuan Road, Shanghai 200240 (China); Shen, Guoqing, E-mail: gqsh@sjtu.edu.cn [School of Agriculture and Biology, Shanghai Jiao Tong University, 800 Dongchuan Road, Shanghai 200240 (China)

2016-11-01

Biochar has been explored as a cost-effective sorbent of contaminants, such as soil fumigant. However, contaminant-loaded biochar probably becomes a source of secondary air pollution. In this study, biochars developed from cow manure and rice husk at 300 °C or 700 °C were used to investigate the catalytic degradation of the soil fumigant 1,3-dichloropropene (1,3-D) in aqueous biochar slurry. Results showed that the adsorption of 1,3-D on the biochars was influenced by Langmuir surface monolayer adsorption. The maximum adsorption capacity of cow manure was greater than that of rice husk at the same pyrolysis temperature. Batch experiments revealed that 1,3-D degradation was improved in aqueous biochar slurry. The most rapid 1,3-D degradation occurred on cow manure-derived biochar produced at 300 °C (C-300), with t{sub 1/2} = 3.47 days. The degradation efficiency of 1,3-D on C-300 was 95.52%. Environmentally persistent free radicals (EPFRs) in biochars were detected via electron paramagnetic resonance (EPR) techniques. Dissolved organic matter (DOM) and hydroxyl radical (·OH) in biochars were detected by using a fluorescence spectrophotometer coupled with a terephthalic acid trapping method. The improvement of 1,3-D degradation efficiency may be attributed to EPFRs and DOM in aqueous biochar slurry. Our results may pose implications in the development of effective reduction strategies for soil fumigant emission with biochar. - Highlights: • Hydrolysis of 1,3-D was accelerated in aqueous biochar slurry. • 1,3-D adsorption kinetics on biochars fitted well with Langmuir model. • Cow manure biochar showed higher catalytic degradation activity for 1,3-D than rice husk biochar did. • EPFRs and DOM have potential roles in 1,3-D degradation on biochar.

Catalytic degradation of the soil fumigant 1,3-dichloropropene in aqueous biochar slurry

International Nuclear Information System (INIS)

Qin, Jiaolong; Cheng, Yuxiao; Sun, Mingxing; Yan, Lili; Shen, Guoqing

2016-01-01

Biochar has been explored as a cost-effective sorbent of contaminants, such as soil fumigant. However, contaminant-loaded biochar probably becomes a source of secondary air pollution. In this study, biochars developed from cow manure and rice husk at 300 °C or 700 °C were used to investigate the catalytic degradation of the soil fumigant 1,3-dichloropropene (1,3-D) in aqueous biochar slurry. Results showed that the adsorption of 1,3-D on the biochars was influenced by Langmuir surface monolayer adsorption. The maximum adsorption capacity of cow manure was greater than that of rice husk at the same pyrolysis temperature. Batch experiments revealed that 1,3-D degradation was improved in aqueous biochar slurry. The most rapid 1,3-D degradation occurred on cow manure-derived biochar produced at 300 °C (C-300), with t 1/2 = 3.47 days. The degradation efficiency of 1,3-D on C-300 was 95.52%. Environmentally persistent free radicals (EPFRs) in biochars were detected via electron paramagnetic resonance (EPR) techniques. Dissolved organic matter (DOM) and hydroxyl radical (·OH) in biochars were detected by using a fluorescence spectrophotometer coupled with a terephthalic acid trapping method. The improvement of 1,3-D degradation efficiency may be attributed to EPFRs and DOM in aqueous biochar slurry. Our results may pose implications in the development of effective reduction strategies for soil fumigant emission with biochar. - Highlights: • Hydrolysis of 1,3-D was accelerated in aqueous biochar slurry. • 1,3-D adsorption kinetics on biochars fitted well with Langmuir model. • Cow manure biochar showed higher catalytic degradation activity for 1,3-D than rice husk biochar did. • EPFRs and DOM have potential roles in 1,3-D degradation on biochar.

The C-terminal amino acid of the MHC-I heavy chain is critical for binding to Derlin-1 in human cytomegalovirus US11-induced MHC-I degradation.

Science.gov (United States)

Cho, Sunglim; Kim, Bo Young; Ahn, Kwangseog; Jun, Youngsoo

2013-01-01

Derlin-1 plays a critical role in endoplasmic reticulum-associated protein degradation (ERAD) of a particular subset of proteins. Although it is generally accepted that Derlin-1 mediates the export of ERAD substrates from the ER to the cytosol, little is known about how Derlin-1 interacts with these substrates. Human cytomegalovirus (HCMV) US11 exploits Derlin-1-dependent ERAD to degrade major histocompatibility complex class I (MHC-I) molecules and evade immune surveillance. US11 requires the cytosolic tail of the MHC-I heavy chain to divert MHC-I molecules into the ERAD pathway for degradation; however, the underlying mechanisms remain unknown. Here, we show that the cytosolic tail of the MHC-I heavy chain, although not required for interaction with US11, is required for tight binding to Derlin-1 and thus for US11-induced dislocation of the MHC-I heavy chain to the cytosol for proteasomal degradation. Surprisingly, deletion of a single C-terminal amino acid from the cytosolic tail disrupted the interaction between MHC-I molecules and Derlin-1, rendering mutant MHC-I molecules resistant to US11-induced degradation. Consistently, deleting the C-terminal cytosolic region of Derlin-1 prevented it from binding to MHC-I molecules. Taken together, these results suggest that the cytosolic region of Derlin-1 is involved in ERAD substrate binding and that this interaction is critical for the Derlin-1-mediated dislocation of the MHC-I heavy chain to the cytosol during US11-induced MHC-I degradation.

Microorganisms as bioindicators of pollutants in soil

Directory of Open Access Journals (Sweden)

Milošević Nada

2010-01-01

Full Text Available Microorganisms are the predominant portion of the soil's biological phase and they are indicators of soil health and quality. Soil microorganisms a take part in degradation of organic and inorganic compounds, b their activity, number and diversity may serve as bioindicators of toxic effects on soil biological activity, c some microbial species may be used for soil bioremediation and d some sensitive microbes are used in eco-toxicity tests. The primary microbial population starts to decompose herbicides several days after their arrival into the soil. The secondary population produces induced enzymes and decomposes herbicides after a period of adaptation. Certain microbial groups are indifferent to the applied herbicides. Effect of heavy metals on soil microbial activity depends on the element, their concentration, microbial species, as well as physical and chemical soil properties. Toxic level of individual pollutants depends on their origin and composition. However, combined application of chemicals makes room for the occurrence of synergistic toxic effects detrimental for the ecosystem and human health. .

Human induced prehistoric and historical soil erosion and landscape development in Southwestern USA

Science.gov (United States)

Dotterweich, Markus; Ivester, Andrew H.; Hanson, Paul R.; Daniel, Larsen; Dye, David H.; Foster, Thomas H., II

2015-04-01

gathered data will be used to i) compare the spatial extent of prehistoric and historic erosion and the short-term and long-term pedological and geomorphological effects of subtle soil erosion against extreme events, ii) assess the feedback-mechanisms of soil erosion on soil fertility and measurable land use changes in prehistorical and historical times, and (iii) estimate the long term effects of soil erosion and sediment deposition on archaeological features. The outcome will provide a decisive step forward to gather new qualitative and quantitative information on soil erosion during the Native American land use period to be able to achieve a better understanding of the long-term human induced landscape evolution in the uplands of the Southeastern USA and deliver data for a better predicting of landscape evolution to future climatic shifts in precipitation regimes.

Soil degradation of parthenin-does it contradict the role of allelopathy in the invasive weed Parthenium hysterophorus L.?

Science.gov (United States)

Belz, Regina G; van der Laan, Michael; Reinhardt, Carl F; Hurle, Karl

2009-09-01

The invasive success of Parthenium hysterophorus L. is thought to be partially attributable to allelopathy mediated by the plant metabolite parthenin. To assess the ecological significance of parthenin release from plant material, its persistence and phytotoxicity in soil was studied. Results show parthenin is rapidly degraded with an average DT (50) of 59 h under standard experimental conditions. Degradation was delayed in sterilized soils, at lower soil moisture, and higher parthenin concentrations. Higher temperatures, higher CEC(pot)/clay content of soils, soil preconditioning with parthenin, and P. hysterophorus infestation accelerated degradation. Physico-chemical and biological processes are, therefore, expected to govern the fate of parthenin in soil. Parthenin exhibited low soil phytotoxicity and did not accumulate over time. Along with the indicated reduction in bioavailability and development of hormetic effects, results suggest that for parthenin to have detrimental allelopathic effects, it requires high P. hysterophorus densities that result in high soil levels of parthenin and soil conditions that favor the persistence of parthenin. In light of this, the ecological significance of parthenin is discussed.

Use of olive oil for soil extraction and ultraviolet degradation of polychlorinated dibenzo-p-dioxins and dibenzofurans.

Science.gov (United States)

Isosaari, P; Tuhkanen, T; Vartiainen, T

2001-03-15

This paper represents a successful laboratory-scale photolysis of soil-bound tetra- to octachlorinated dibenzo-p-dioxins and dibenzofurans (PCDD/Fs) in olive oil. The irradiation source consisted of two blacklight lamps emitting light at a near-ultraviolet range. Samples used in the experiments included pure 1,2,3,4,6,7,8-heptachlorodibenzofuran, PCDD/F extract made of a wood preservative (chlorophenol product Ky 5), and soil that was highly contaminated with PCDD/Fs. Degradation of 1,2,3,4,6,7,8-heptachlorodibenzofuran dissolved in olive oil proceeded rapidlywith a first-order reaction half-life of 13 min. Irradiation of a soil sample resulted in an 84% reduction in PCDD/F toxicity equivalent (I-TEQ) in 17.5 h. A more complete degradation of soil-bound PCDD/Fs was achieved after extraction of the soil with olive oil. The oil was effective in solubilizing PCDD/Fs. After one extraction at room temperature, only 9% of I-TEQ remained in soil. Irradiation of the resulting extract reduced toxicity of the extract by 99%, and even the highly chlorinated congeners octachlorodibenzo-p-dioxin and octachlorodibenzofuran degraded easily (97 and 99% degradation, respectively). Photodegradation byproducts found included diphenyl ether and small amounts of dechlorination products, which were mainly nontoxic PCDD/Fs. Degradation was probably mediated by light absorption of unsaturated fatty acids and phenolic compounds in olive oil, leading to sensitized photolysis of PCDD/Fs.

Amylase activity of a starch degrading bacteria isolated from soil ...

African Journals Online (AJOL)

Starch degrading bacteria are most important for industries such as food, fermentation, textile and paper. Thus isolating and manipulating pure culture from various waste materials has manifold importance for various biotechnology industries. In the present investigation a bacterial strain was isolated from soil sample ...

Light-induced protein degradation in human-derived cells.

Science.gov (United States)

Sun, Wansheng; Zhang, Wenyao; Zhang, Chao; Mao, Miaowei; Zhao, Yuzheng; Chen, Xianjun; Yang, Yi

2017-05-27

Controlling protein degradation can be a valuable tool for posttranslational regulation of protein abundance to study complex biological systems. In the present study, we designed a light-switchable degron consisting of a light oxygen voltage (LOV) domain of Avena sativa phototropin 1 (AsLOV2) and a C-terminal degron. Our results showed that the light-switchable degron could be used for rapid and specific induction of protein degradation in HEK293 cells by light in a proteasome-dependent manner. Further studies showed that the light-switchable degron could also be utilized to mediate the degradation of secreted Gaussia princeps luciferase (GLuc), demonstrating the adaptability of the light-switchable degron in different types of protein. We suggest that the light-switchable degron offers a robust tool to control protein levels and may serves as a new and significant method for gene- and cell-based therapies. Copyright © 2017 Elsevier Inc. All rights reserved.

Diphenylarsinic acid contaminated soil remediation by titanium dioxide (P25) photocatalysis: Degradation pathway, optimization of operating parameters and effects of soil properties

International Nuclear Information System (INIS)

Wang, A-nan; Teng, Ying; Hu, Xue-feng; Wu, Long-hua; Huang, Yu-juan; Luo, Yong-ming; Christie, Peter

2016-01-01

Diphenylarsinic acid (DPAA) is formed during the leakage of arsenic chemical weapons in sites and poses a high risk to biota. However, remediation methods for DPAA contaminated soils are rare. Here, the photocatalytic oxidation (PCO) process by nano-sized titanium dioxide (TiO_2) was applied to degrade DPAA in soil. The degradation pathway was firstly studied, and arsenate was identified as the final product. Then, an orthogonal array experimental design of L_9(3)"4, only 9 experiments were needed, instead of 81 experiments in a conventional one-factor-at-a-time, was used to optimize the operational parameters soil:water ratio, TiO_2 dosage, irradiation time and light intensity to increase DPAA removal efficiency. Soil:water ratio was found to have a more significant effect on DPAA removal efficiency than other properties. The optimum conditions to treat 4 g soil with a DPAA concentration of 20 mg kg"−"1 were found to be a 1:10 soil: water ratio, 40 mW cm"−"2 light intensity, 5% TiO_2 in soil, and a 3-hour irradiation time, with a removal efficiency of up to 82.7%. Furthermore, this method (except for a change in irradiation time from 3 to 1.5 h) was validated in nine different soils and the removal efficiencies ranged from 57.0 to 78.6%. Removal efficiencies were found to be negatively correlated with soil electrical conductivity, organic matter content, pH and total phosphorus content. Finally, coupled with electron spin resonance (ESR) measurement, these soil properties affected the generation of OH• by TiO_2 in soil slurry. This study suggests that TiO_2 photocatalytic oxidation is a promising treatment for removing DPAA from soil. - Highlights: • DPAA was degraded into arsenate through TiO_2 (P25) photocatalytic oxidation. • Soil/water ratio was more influential on the removal of DPAA in soil by TiO_2 (P25). • Soil properties affected the adsorption of DPAA and the generation of OH• by TiO_2.

[Soil particle size distribution and its fractal dimension among degradation sequences of the alpine meadow in the source region of the Yangtze and Yellow River, Qinghai-Tibetan Plateau, China].

Science.gov (United States)

Wei, Mao-Hong; Lin, Hui-Long

2014-03-01

The alpine meadow in the source region of the Yangtze and Yellow River is suffering serious deterioration. Though great efforts have been put into, the restoration for the degraded grassland is far from being effective, mainly due to poor understanding of the degradation mechanism of alpine meadow in this region. In order to clarify the formation mechanism of degradation grassland and provide the new ideas for restoration, degradation sequences of the alpine meadow in the source region of the Yangtze and Yellow River were taken as target systems to analyze the soil particle size distribution, the fractal dimension of the soil particle size, and the relationship between soil erosion modulus and fractal dimension. The results showed that, with increasing grassland degradation, the percentage contents of clay increased while the percentage contents of silt sand and very fine sand showed a decreasing trend. The fractal dimension presented a positive correlation with clay among the degradation sequences while negative correlations were found with very fine sand and silt sand. The curvilinear regression of fractal dimension and erosion modulus fitted a quadratic function. Judged by the function, fractal dimension 2.81 was the threshold value of soil erosion. The threshold value has an indicative meaning on predicting the breakout of grazing-induced erosion and on restoration of the degraded grassland. Taking fractal dimension of 2.81 as the restoration indicator, adoption of corresponding measures to make fractal dimension less than 2.81, would an effective way to restore the degradation grassland.

Engineering Pseudomonas putida KT2440 for simultaneous degradation of organophosphates and pyrethroids and its application in bioremediation of soil.

Science.gov (United States)

Zuo, Zhenqiang; Gong, Ting; Che, You; Liu, Ruihua; Xu, Ping; Jiang, Hong; Qiao, Chuanling; Song, Cunjiang; Yang, Chao

2015-06-01

Agricultural soils are usually co-contaminated with organophosphate (OP) and pyrethroid pesticides. To develop a stable and marker-free Pseudomonas putida for co-expression of two pesticide-degrading enzymes, we constructed a suicide plasmid with expression cassettes containing a constitutive promoter J23119, an OP-degrading gene (mpd), a pyrethroid-hydrolyzing carboxylesterase gene (pytH) that utilizes the upp gene as a counter-selectable marker for upp-deficient P. putida. By introduction of suicide plasmid and two-step homologous recombination, both mpd and pytH genes were integrated into the chromosome of a robust soil bacterium P. putida KT2440 and no selection marker was left on chromosome. Functional expression of mpd and pytH in P. putida KT2440 was demonstrated by Western blot analysis and enzyme activity assays. Degradation experiments with liquid cultures showed that the mixed pesticides including methyl parathion, fenitrothion, chlorpyrifos, permethrin, fenpropathrin, and cypermethrin (0.2 mM each) were degraded completely within 48 h. The inoculation of engineered strain (10(6) cells/g) to soils treated with the above mixed pesticides resulted in a higher degradation rate than in noninoculated soils. All six pesticides could be degraded completely within 15 days in fumigated and nonfumigated soils with inoculation. Theses results highlight the potential of the engineered strain to be used for in situ bioremediation of soils co-contaminated with OP and pyrethroid pesticides.

Bacteria capable of degrading anthracene, phenanthrene, and fluoranthene as revealed by DNA based stable-isotope probing in a forest soil

Energy Technology Data Exchange (ETDEWEB)

Song, Mengke [Guangzhou Institute of Geochemistry, Chinese Academy of Sciences, Guangzhou 510640 (China); Jiang, Longfei [College of Life Sciences, Nanjing Agricultural University, Nanjing 210095 (China); Zhang, Dayi [Lancaster Environment Centre, Lancaster University, Lancaster LA1 4YQ (United Kingdom); Luo, Chunling, E-mail: clluo@gig.ac.cn [Guangzhou Institute of Geochemistry, Chinese Academy of Sciences, Guangzhou 510640 (China); Wang, Yan [Key Laboratory of Industrial Ecology and Environmental Engineering (MOE), School of Environmental Science and Technology, Dalian University of Technology, Dalian 116024 (China); Yu, Zhiqiang [Guangzhou Institute of Geochemistry, Chinese Academy of Sciences, Guangzhou 510640 (China); Yin, Hua [College of Environment and Energy, South China University of Technology, Guangzhou 510006 (China); Zhang, Gan [Guangzhou Institute of Geochemistry, Chinese Academy of Sciences, Guangzhou 510640 (China)

2016-05-05

Highlights: • Investigate PAHs degraders in forest carbon-rich soils via DNA-SIP. • Rhodanobacter is identified to metabolite anthracene for the first time. • The first fluoranthene degrader belongs to Acidobacteria. • Different functions of PAHs degraders in forest soils from contaminated soils. - Abstract: Information on microorganisms possessing the ability to metabolize different polycyclic aromatic hydrocarbons (PAHs) in complex environments helps in understanding PAHs behavior in natural environment and developing bioremediation strategies. In the present study, stable-isotope probing (SIP) was applied to investigate degraders of PAHs in a forest soil with the addition of individually {sup 13}C-labeled phenanthrene, anthracene, and fluoranthene. Three distinct phylotypes were identified as the active phenanthrene-, anthracene- and fluoranthene-degrading bacteria. The putative phenanthrene degraders were classified as belonging to the genus Sphingomona. For anthracene, bacteria of the genus Rhodanobacter were the putative degraders, and in the microcosm amended with fluoranthene, the putative degraders were identified as belonging to the phylum Acidobacteria. Our results from DNA-SIP are the first to directly link Rhodanobacter- and Acidobacteria-related bacteria with anthracene and fluoranthene degradation, respectively. The results also illustrate the specificity and diversity of three- and four-ring PAHs degraders in forest soil, contributes to our understanding on natural PAHs biodegradation processes, and also proves the feasibility and practicality of DNA-based SIP for linking functions with identity especially uncultured microorganisms in complex microbial biota.

Vital soil; function, value and properties

NARCIS (Netherlands)

Doelman, P.; Eijsackers, H.J.P.

2004-01-01

Healthy soil, with active soil life, deters long-term soil degradation and ensures that geo-physical processes are undisturbed. Is the vitality of soil under threat due to human civilization? Or is it due to contamination, intensification, and deforestation? Vital Soil aims to look at the effects

Characterization of dioxygenases and biosurfactants produced by crude oil degrading soil bacteria

Directory of Open Access Journals (Sweden)

Santhakumar Muthukamalam

Full Text Available ABSTRACT Role of microbes in bioremediation of oil spills has become inevitable owing to their eco friendly nature. This study focused on the isolation and characterization of bacterial strains with superior oil degrading potential from crude-oil contaminated soil. Three such bacterial strains were selected and subsequently identified by 16S rRNA gene sequence analysis as Corynebacterium aurimucosum, Acinetobacter baumannii and Microbacterium hydrocarbonoxydans respectively. The specific activity of catechol 1,2 dioxygenase (C12O and catechol 2,3 dioxygenase (C23O was determined in these three strains wherein the activity of C12O was more than that of C23O. Among the three strains, Microbacterium hydrocarbonoxydans exhibited superior crude oil degrading ability as evidenced by its superior growth rate in crude oil enriched medium and enhanced activity of dioxygenases. Also degradation of total petroleum hydrocarbon (TPH in crude oil was higher with Microbacterium hydrocarbonoxydans. The three strains also produced biosurfactants of glycolipid nature as indicated d by biochemical, FTIR and GCMS analysis. These findings emphasize that such bacterial strains with superior oil degrading capacity may find their potential application in bioremediation of oil spills and conservation of marine and soil ecosystem.

Model for Stress-induced Protein Degradation in Lemna minor1

Science.gov (United States)

Cooke, Robert J.; Roberts, Keith; Davies, David D.

1980-01-01

Transfer of Lemna minor fronds to adverse or stress conditions produces a large increase in the rate of protein degradation. Cycloheximide partially inhibits stress-induced protein degradation and also partially inhibits the protein degradation which occurs in the absence of stress. The increased protein degradation does not appear to be due to an increase in activity of soluble proteolytic enzymes. Biochemical evidence indicates that stress, perhaps acting via hormones, affects the permeability of certain membranes, particularly the tonoplast. A general model for stress-induced protein degradation is presented in which changes in membrane properties allow vacuolar proteolytic enzymes increased access to cytoplasmic proteins. PMID:16661588

Least limiting water range of Udox soil under degraded pastures on different sun-exposed faces

Science.gov (United States)

Passos, Renato Ribeiro; Marciano da Costa, Liovando; Rodrigues de Assis, Igor; Santos, Danilo Andrade; Ruiz, Hugo Alberto; Guimarães, Lorena Abdalla de Oliveira Prata; Andrade, Felipe Vaz

2017-07-01

The efficient use of water is increasingly important and proper soil management, within the specificities of each region of the country, allows achieving greater efficiency. The South and Caparaó regions of Espírito Santo, Brazil are characterized by relief of `hill seas' with differences in the degree of pasture degradation due to sun exposure. The objective of this study was to evaluate the least limiting water range in Udox soil under degraded pastures with two faces of exposure to the sun and three pedoenvironments. In each pedoenvironment, namely Alegre, Celina, and Café, two areas were selected, one with exposure on the North/West face and the other on the South/East face. In each of these areas, undisturbed soil samples were collected at 0-10 cm depth to determine the least limiting water range. The exposed face of the pasture that received the highest solar incidence (North/West) presented the lowest values in least limiting water range. The least limiting water range proved to be a physical quality indicator for Udox soil under degraded pastures.

Determination of degradation rates of organic substances in the unsaturated soil zone depending on the grain size fractions of various soil types

Science.gov (United States)

Fichtner, Thomas; Stefan, Catalin; Goersmeyer, Nora

2015-04-01

Rate and extent of the biological degradation of organic substances during transport through the unsaturated soil zone is decisively influenced by the chemical and physical properties of the pollutants such as water solubility, toxicity and molecular structure. Furthermore microbial degradation processes are also influenced by soil-specific properties. An important parameter is the soil grain size distribution on which the pore volume and the pore size depends. Changes lead to changes in air and water circulation as well as preferred flow paths. Transport capacity of water inclusive nutrients is lower in existing bad-drainable fine pores in soils with small grain size fractions than in well-drainable coarse pores in a soil with bigger grain size fractions. Because fine pores are saturated with water for a longer time than the coarse pores and oxygen diffusion in water is ten thousand times slower than in air, oxygen is replenished much slower in soils with small grain size fractions. As a result life and growth conditions of the microorganisms are negatively affected. This leads to less biological activity, restricted degradation/mineralization of pollutants or altered microbial processes. The aim of conducted laboratory column experiments was to study the correlation between the grain size fractions respectively pore sizes, the oxygen content and the biodegradation rate of infiltrated organic substances. Therefore two columns (active + sterile control) were filled with different grain size fractions (0,063-0,125 mm, 0,2-0,63 mm and 1-2 mm) of soils. The sterile soil was inoculated with a defined amount of a special bacteria culture (sphingobium yanoikuae). A solution with organic substances glucose, oxalic acid, sinaphylic alcohol and nutrients was infiltrated from the top in intervals. The degradation of organic substances was controlled by the measurement of dissolved organic carbon in the in- and outflow of the column. The control of different pore volumes

Soil Degradation Evaluated by a 27 years Landsat image (Vis-Nir-Swir-Tir), climate and digital elevation derivatives

Science.gov (United States)

Dematte, J. A., Sr.; Santos, N. V.; de Almeida Malzoni, M. M.; Poppiel, R. R.; Fongaro, C. T.; Rizzo, R.; Safanelli, J. L.; Sayão, V. M.; Mendes, W. S.

2017-12-01

According to Food and Agriculture Organization of the United Nations, 30% of the global soils are degraded. Therefore, novel researches on soil degradation process are imperative to prevent damages on social and environmental dynamics. Since we have a wide world dimension, and few manpower, we have to focus on high dimensional evaluation techniques such as remote sensing. The main goal of this work was to develop a method, based on a 27 years time-series of satellite images (Landsat), from which determine the most important factors on soil degradation. The area is located in south Brazil with a 1400 km2 area. The steps of the method are as follows: a) we collected images from the area and based on a novel technique determined the areas with exposed soils; b) we quantified soil properties such as clay and capacity of ionic exchange based on pixel spectra signature; c) the technique also indicated how many times a single pixel was with bare soil during the period; d) we also determined the surface temperature based on band 6; e) using elevation model we created the layers LS factor, drainage density, topographic wetness index, solar radiation; f) we also determined climate information (water balance); g) organic matter (OM) was also estimated. All factors from item a to f were balanced and overlapped (GIS) to generate an index of soil degradation, SD (fig 1a) - values from 1 (low risk) to 5 (high risk). We concluded that 30% of the area is degraded. SD presented coherent values with OM and validate the method. We observed that areas with higher SD (5) contain 43.6% less OM than the ones with low risk (1). In addition, the soil spectral reflectance curve was analyzed concluding that degraded soils shows higher intensity. The current land use (fig 1b) was correlated demonstrating that a higher risk of SD happens mainly in sugar cane (41.6%) in contrast to pasture (16.9%) and forestry (11.7%). Therefore, this approach allows land uses decision-making and public policies.

Degradation and plant uptake of nonylphenol (NP) and nonylphenol-12-ethoxylate (NP12EO) in four contrasting agricultural soils

International Nuclear Information System (INIS)

Sjoestroem, A.E.; Collins, C.D.; Smith, S.R.; Shaw, G.

2008-01-01

Nonylphenol polyethoxylates (NPEOs) are surfactants found ubiquitously in the environment due to widespread industrial and domestic use. Biodegradation of NPEOs produces nonylphenol (NP), an endocrine disruptor. Sewage sludge application introduces NPEOs and NP into soils, potentially leading to accumulation in soils and crops. We examined degradation of NP and nonylphenol-12-ethoxylate (NP12EO) in four soils. NP12EO degraded rapidly (initial half time 0.3-5 days). Concentrations became undetectable within 70-90 days, with a small increase in NP concentrations after 30 days. NP initially degraded quickly (mean half time 11.5 days), but in three soils a recalcitrant fraction of 26-35% remained: the non-degrading fraction may consist of branched isomers, resistant to biodegradation. Uptake of NP by bean plants was also examined. Mean bioconcentration factors for shoots and seeds were 0.71 and 0.58, respectively. Removal of NP from the soil by plant uptake was negligible (0.01-0.02% of initial NP). Root concentrations were substantially higher than shoot and seed concentrations. - Degradation curves of nonylphenol (NP) and nonylphenol-12-ethoxylate (NP12EO) in four soils indicate that 26-35% of NP is recalcitrant, with minor NP ingrowth from NP12EO breakdown

Characterization of Trapped Lignin-Degrading Microbes in Tropical Forest Soil

Energy Technology Data Exchange (ETDEWEB)

DeAngelis, Kristen; Allgaier, Martin; Chavarria, Yaucin; Fortney, Julian; Hugenholtz, Phillip; Simmons, Blake; Sublette, Kerry; Silver, Whendee; Hazen, Terry

2011-07-14

Lignin is often the most difficult portion of plant biomass to degrade, with fungi generally thought to dominate during late stage decomposition. Lignin in feedstock plant material represents a barrier to more efficient plant biomass conversion and can also hinder enzymatic access to cellulose, which is critical for biofuels production. Tropical rain forest soils in Puerto Rico are characterized by frequent anoxic conditions and fluctuating redox, suggesting the presence of lignin-degrading organisms and mechanisms that are different from known fungal decomposers and oxygen-dependent enzyme activities. We explored microbial lignin-degraders by burying bio-traps containing lignin-amended and unamended biosep beads in the soil for 1, 4, 13 and 30 weeks. At each time point, phenol oxidase and peroxidase enzyme activity was found to be elevated in the lignin-amended versus the unamended beads, while cellulolytic enzyme activities were significantly depressed in lignin-amended beads. Quantitative PCR of bacterial communities showed more bacterial colonization in the lignin-amended compared to the unamended beads after one and four weeks, suggesting that the lignin supported increased bacterial abundance. The microbial community was analyzed by small subunit 16S ribosomal RNA genes using microarray (PhyloChip) and by high-throughput amplicon pyrosequencing based on universal primers targeting bacterial, archaeal, and eukaryotic communities. Community trends were significantly affected by time and the presence of lignin on the beads. Lignin-amended beads have higher relative abundances of representatives from the phyla Actinobacteria, Firmicutes, Acidobacteria and Proteobacteria compared to unamended beads. This study suggests that in low and fluctuating redox soils, bacteria could play a role in anaerobic lignin decomposition.

Characterization of trapped lignin-degrading microbes in tropical forest soil

Energy Technology Data Exchange (ETDEWEB)

DeAngelis, K.M.; Allgaier, M.; Chavarria, Y.; Fortney, J.L.; Hugenholz, P.; Simmons, B.; Sublette, K.; Silver, W.L.; Hazen, T.C.

2011-03-01

Lignin is often the most difficult portion of plant biomass to degrade, with fungi generally thought to dominate during late stage decomposition. Lignin in feedstock plant material represents a barrier to more efficient plant biomass conversion and can also hinder enzymatic access to cellulose, which is critical for biofuels production. Tropical rain forest soils in Puerto Rico are characterized by frequent anoxic conditions and fluctuating redox, suggesting the presence of lignin-degrading organisms and mechanisms that are different from known fungal decomposers and oxygen-dependent enzyme activities. We explored microbial lignin-degraders by burying bio-traps containing lignin-amended and unamended biosep beads in the soil for 1, 4, 13 and 30 weeks. At each time point, phenol oxidase and peroxidase enzyme activity was found to be elevated in the lignin-amended versus the unamended beads, while cellulolytic enzyme activities were significantly depressed in lignin-amended beads. Quantitative PCR of bacterial communities showed more bacterial colonization in the lignin-amended compared to the unamended beads after one and four weeks, suggesting that the lignin supported increased bacterial abundance. The microbial community was analyzed by small subunit 16S ribosomal RNA genes using microarray (PhyloChip) and by high-throughput amplicon pyrosequencing based on universal primers targeting bacterial, archaeal, and eukaryotic communities. Community trends were significantly affected by time and the presence of lignin on the beads. Lignin-amended beads have higher relative abundances of representatives from the phyla Actinobacteria, Firmicutes, Acidobacteria and Proteobacteria compared to unamended beads. This study suggests that in low and fluctuating redox soils, bacteria could play a role in anaerobic lignin decomposition.

Sphingomonas from petroleum-contaminated soils in Shenfu, China and their PAHs degradation abilities

Directory of Open Access Journals (Sweden)

Lisha Zhou

2016-06-01

Full Text Available Abstract Members of the Sphingomonas genus are often isolated from petroleum-contaminated soils due to their unique abilities to degrade polycyclic aromatic hydrocarbons (PAHs, which are important for in situ bioremediation. In this study, a combined phenotypic and genotypic approach using streptomycin-containing medium and Sphingomonas -specific PCR was developed to isolate and identify culturable Sphingomonas strains present in petroleum-contaminated soils in the Shenfu wastewater irrigation zone. Of the 15 soil samples examined, 12 soils yielded yellow streptomycin-resistant colonies. The largest number of yellow colony-forming units (CFUs could reach 105 CFUs g-1 soil. The number of yellow CFUs had a significant positive correlation (p < 0.05 with the ratio of PAHs to total petroleum hydrocarbons (TPH, indicating that Sphingomonas may play a key role in degrading the PAH fraction of the petroleum contaminants at this site. Sixty yellow colonies were selected randomly and analyzed by colony PCR using Sphingomonas -specific primers, out of which 48 isolates had PCR-positive signals. The 48 positive amplicons generated 8 distinct restriction fragment length polymorphism (RFLP patterns, and 7 out of 8 phylotypes were identified as Sphingomonas by 16S rRNA gene sequencing of the representative strains. Within these 7 Sphingomonas strains, 6 strains were capable of using fluorene as the sole carbon source, while 2 strains were phenanthrene-degrading Sphingomonas. To the best of our knowledge, this is the first report to evaluate the relationship between PAHs contamination levels and culturable Sphingomonas in environmental samples.

Predicting where enhanced atrazine degradation will occur based on soil pH and herbicide use history

Science.gov (United States)

Soil bacteria on all continents except Antartica have developed the ability to rapidly degrade the herbicide atrazine, a phenomenon referred to as enhanced degradation. The agronomic significance of enhanced degradation is the potential for reduced residual weed control with atrazine in Corn, Sorgh...

Pyrethroid-Degrading Microorganisms and Their Potential for the Bioremediation of Contaminated Soils: A Review

Science.gov (United States)

Cycoń, Mariusz; Piotrowska-Seget, Zofia

2016-01-01

Pyrethroid insecticides have been used to control pests in agriculture, forestry, horticulture, public health and for indoor home use for more than 20 years. Because pyrethroids were considered to be a safer alternative to organophosphate pesticides (OPs), their applications significantly increased when the use of OPs was banned or limited. Although, pyrethroids have agricultural benefits, their widespread and continuous use is a major problem as they pollute the terrestrial and aquatic environments and affect non-target organisms. Since pyrethroids are not degraded immediately after application and because their residues are detected in soils, there is an urgent need to remediate pyrethroid-polluted environments. Various remediation technologies have been developed for this purpose; however, bioremediation, which involves bioaugmentation and/or biostimulation and is a cost-effective and eco-friendly approach, has emerged as the most advantageous method for cleaning-up pesticide-contaminated soils. This review presents an overview of the microorganisms that have been isolated from pyrethroid-polluted sites, characterized and applied for the degradation of pyrethroids in liquid and soil media. The paper is focused on the microbial degradation of the pyrethroids that have been most commonly used for many years such as allethrin, bifenthrin, cyfluthrin, cyhalothrin, cypermethrin, deltamethrin, fenpropathrin, fenvalerate, and permethrin. Special attention is given to the bacterial strains from the genera Achromobacter, Acidomonas, Bacillus, Brevibacterium, Catellibacterium, Clostridium, Lysinibacillus, Micrococcus, Ochrobactrum, Pseudomonas, Serratia, Sphingobium, Streptomyces, and the fungal strains from the genera Aspergillus, Candida, Cladosporium, and Trichoderma, which are characterized by their ability to degrade various pyrethroids. Moreover, the current knowledge on the degradation pathways of pyrethroids, the enzymes that are involved in the cleavage of

Pyrethroid-Degrading Microorganisms and Their Potential for the Bioremediation of Contaminated Soils: A Review

Directory of Open Access Journals (Sweden)

Mariusz Sebastian Cycoń

2016-09-01

Full Text Available Pyrethroid insecticides have been used to control pests in agriculture, forestry, horticulture, public health and for indoor home use for more than 20 years. Because pyrethroids were considered to be a safer alternative to organophosphate pesticides (OPs, their applications significantly increased when the use of OPs was banned or limited. Although pyrethroids have agricultural benefits, their widespread and continuous use is a major problem as they pollute the terrestrial and aquatic environments and affect non-target organisms. Since pyrethroids are not degraded immediately after application and because their residues are detected in soils, there is an urgent need to remediate pyrethroid-polluted environments. Various remediation technologies have been developed for this purpose; however, bioremediation, which involves bioaugmentation and/or biostimulation and is a cost-effective and eco-friendly approach, has emerged as the most advantageous method for cleaning-up pesticide-contaminated soils. This review presents an overview of the microorganisms that have been isolated from pyrethroid-polluted sites, characterized and applied for the degradation of pyrethroids in liquid and soil media. The paper is focused on the microbial degradation of the pyrethroids that have been most commonly used for many years such as allethrin, bifenthrin, cyfluthrin, cyhalothrin, cypermethrin, deltamethrin, fenpropathrin, fenvalerate and permethrin. Special attention is given to the bacterial strains from the genera Achromobacter, Acidomonas, Bacillus, Brevibacterium, Catellibacterium, Clostridium, Lysinibacillus, Micrococcus, Ochrobactrum, Pseudomonas, Serratia, Sphingobium, Streptomyces and the fungal strains from the genera Aspergillus, Candida, Cladosporium and Trichoderma, which are characterized by their ability to degrade various pyrethroids. Moreover, the current knowledge on the degradation pathways of pyrethroids, the enzymes that are involved in the

Critical Analysis of Forest Degradation in the Southern Eastern Ghats of India: Comparison of Satellite Imagery and Soil Quality Index

Science.gov (United States)

Ramachandran, Andimuthu; Radhapriya, Parthasarathy; Jayakumar, Shanmuganathan; Dhanya, Praveen; Geetha, Rajadurai

2016-01-01

India has one of the largest assemblages of tropical biodiversity, with its unique floristic composition of endemic species. However, current forest cover assessment is performed via satellite-based forest surveys, which have many limitations. The present study, which was performed in the Eastern Ghats, analysed the satellite-based inventory provided by forest surveys and inferred from the results that this process no longer provides adequate information for quantifying forest degradation in an empirical manner. The study analysed 21 soil properties and generated a forest soil quality index of the Eastern Ghats, using principal component analysis. Using matrix modules and geospatial technology, we compared the forest degradation status calculated from satellite-based forest surveys with the degradation status calculated from the forest soil quality index. The Forest Survey of India classified about 1.8% of the Eastern Ghats’ total area as degraded forests and the remainder (98.2%) as open, dense, and very dense forests, whereas the soil quality index results found that about 42.4% of the total area is degraded, with the remainder (57.6%) being non-degraded. Our ground truth verification analyses indicate that the forest soil quality index along with the forest cover density data from the Forest Survey of India are ideal tools for evaluating forest degradation. PMID:26812397

Critical Analysis of Forest Degradation in the Southern Eastern Ghats of India: Comparison of Satellite Imagery and Soil Quality Index.

Science.gov (United States)

Ramachandran, Andimuthu; Radhapriya, Parthasarathy; Jayakumar, Shanmuganathan; Dhanya, Praveen; Geetha, Rajadurai

2016-01-01

India has one of the largest assemblages of tropical biodiversity, with its unique floristic composition of endemic species. However, current forest cover assessment is performed via satellite-based forest surveys, which have many limitations. The present study, which was performed in the Eastern Ghats, analysed the satellite-based inventory provided by forest surveys and inferred from the results that this process no longer provides adequate information for quantifying forest degradation in an empirical manner. The study analysed 21 soil properties and generated a forest soil quality index of the Eastern Ghats, using principal component analysis. Using matrix modules and geospatial technology, we compared the forest degradation status calculated from satellite-based forest surveys with the degradation status calculated from the forest soil quality index. The Forest Survey of India classified about 1.8% of the Eastern Ghats' total area as degraded forests and the remainder (98.2%) as open, dense, and very dense forests, whereas the soil quality index results found that about 42.4% of the total area is degraded, with the remainder (57.6%) being non-degraded. Our ground truth verification analyses indicate that the forest soil quality index along with the forest cover density data from the Forest Survey of India are ideal tools for evaluating forest degradation.

A Slurry Biocascade for the Enhanced Degradation of Fuels in Soils

National Research Council Canada - National Science Library

Apitz, Sabine

1994-01-01

.... In the first step of the cascade, the simplest fuel components (e.g., n-alkanes) are biodegraded. Then, the soil is transferred to the next steps in the cascade, in which different "microbial soups" degrade the next groups of hydrocarbons...

Development and duration of accelerated degradation of nematicides in different soils

NARCIS (Netherlands)

Smelt, J.H.; Peppel-Groen, van de A.E.; Pas, van der L.J.T.; Dijksterhuis, A.

1996-01-01

The development and duration of accelerated degradation of nematicides were studied in incubation experiments with soils from three experimental fields that had been treated annually for three to ten years with aldicarb, oxamyl, ethoprophos, fenamiphos or 1,3-dichloropropene. Highly accelerated

Detection of Toluene Degradation in Bacteria Isolated from Oil Contaminated Soils

International Nuclear Information System (INIS)

Ainon Hamzah; Tavakoli, A.; Amir Rabu

2011-01-01

Toluene (C 7 H 8 ) a hydrocarbon in crude oil, is a common contaminant in soil and groundwater. In this study, the ability to degrade toluene was investigated from twelve bacteria isolates which were isolated from soil contaminated with oil. Out of 12 bacterial isolates tested, most of Pseudomonas sp. showed the capability to grow in 1 mM of toluene compared with other isolates on the third day of incubation. Based on enzyme assays towards toluene monooxygenase, Pseudomonas aeruginosa UKMP-14T and Bacillus cereus UKMP-6G were shown to have the highest ability to degrade toluene. The toluene monooxygenase activity was analysed by using two calorimetric methods, Horseradish peroxidase (HRP) and indole-indigo. Both of the methods measured the production of catechol by the enzymatic reaction of toluene monooxygenase. In the HRP assay, the highest enzyme activity was 0.274 U/ mL, exhibited by Pseudomonas aeruginosa UKMP-14T. However, for indole-indigo assay, Bacillus cereus UKMP-6G produced the highest enzyme activity of 0.291 U/ ml. Results from both experiments showed that Pseudomonas aeruginosa UKMP-14T and Bacillus cereus UKMP-6G were able to degrade toluene. (author)

Degradation of 14C - DDT in soils under moist and flooded conditions with rice straw and green manure amendments

International Nuclear Information System (INIS)

Dubey, S.; Dubey, P.S.; Kale, S.P.; Murthy, N.B.K.

2001-01-01

Degradation of 14 C - DDT in moist and flooded soils was studied with rice straw and green manure amendments for 100 days. The mineralization of DDT was not significantly influenced by any of the treatments. Rice straw and green manure in flooded soil brought about decrease in extractable 14 C - residues with concomitant increase in soil bound residues. DDT has a very short residence in flooded soils though radiocarbon was more in extractable residues. DDD is the major degradation product in flooded soils. (author)

Effects of PV Module Soiling on Glass Surface Resistance and Potential-Induced Degradation: Preprint

Energy Technology Data Exchange (ETDEWEB)

Hacke, Peter; Burton, Patrick; Hendrickson, Alex; Spartaru, Sergiu; Glick, Stephen; Terwilliger, Kent

2015-12-03

The sheet resistance of three soil types (Arizona road dust, soot, and sea salt) on glass were measured by the transmission line method as a function of relative humidity (RH) between 39% and 95% at 60 degrees C. Sea salt yielded a 3.5 order of magnitude decrease in resistance on the glass surface when the RH was increased over this RH range. Arizona road dust showed reduced sheet resistance at lower RH, but with less humidity sensitivity over the range tested. The soot sample did not show significant resistivity change compared to the unsoiled control. Photovoltaic modules with sea salt on their faces were step-stressed between 25% and 95% RH at 60 degrees C applying -1000 V bias to the active cell circuit. Leakage current from the cell circuit to ground ranged between two and ten times higher than that of the unsoiled controls. Degradation rate of modules with salt on the surface increased with increasing RH and time.

Diphenylarsinic acid contaminated soil remediation by titanium dioxide (P25) photocatalysis: Degradation pathway, optimization of operating parameters and effects of soil properties

Energy Technology Data Exchange (ETDEWEB)