Moorean tree snail survival revisited: a multi-island genealogical perspective

Directory of Open Access Journals (Sweden)

Meyer Jean-Yves

2009-08-01

Full Text Available Abstract Background The mass extirpation of the island of Moorea's endemic partulid tree snail fauna, following the deliberate introduction of the alien predator Euglandina rosea, represents one of the highest profile conservation crises of the past thirty years. All of the island's partulids were thought to be extirpated by 1987, with five species persisting in zoos, but intensive field surveys have recently detected a number of surviving wild populations. We report here a mitochondrial (mt phylogenetic estimate of Moorean partulid wild and captive lineage survival calibrated with a reference museum collection that pre-dates the predator's introduction and that also includes a parallel dataset from the neighboring island of Tahiti. Results Although severe winnowing of Moorea's mt lineage diversity has occurred, seven of eight (six Partula; two Samoana partulid tip clades remain extant. The extinct mt clade occurred predominantly in the P. suturalis species complex and it represented a major component of Moorea's endemic partulid treespace. Extant Moorean mt clades exhibited a complex spectrum of persistence on Moorea, in captivity, and (in the form of five phylogenetically distinct sister lineages on Tahiti. Most notably, three Partula taxa, bearing two multi-island mt lineages, have survived decades of E. rosea predation on Moorea (P. taeniata and in the valleys of Tahiti (P. hyalina and P. clara. Their differential persistence was correlated with intrinsic attributes, such as taxonomy and mt lineages, rather than with their respective within-island distribution patterns. Conclusion Conservation efforts directed toward Moorean and Tahitian partulids have typically operated within a single island frame of reference, but our discovery of robust genealogical ties among survivors on both islands implies that a multi-island perspective is required. Understanding what genetic and/or ecological factors have enabled Partula taeniata, P. hyalina and P

Will Climate Change, Genetic and Demographic Variation or Rat Predation Pose the Greatest Risk for Persistence of an Altitudinally Distributed Island Endemic?

Directory of Open Access Journals (Sweden)

Alison Shapcott

2012-11-01

Full Text Available Species endemic to mountains on oceanic islands are subject to a number of existing threats (in particular, invasive species along with the impacts of a rapidly changing climate. The Lord Howe Island endemic palm Hedyscepe canterburyana is restricted to two mountains above 300 m altitude. Predation by the introduced Black Rat (Rattus rattus is known to significantly reduce seedling recruitment. We examined the variation in Hedyscepe in terms of genetic variation, morphology, reproductive output and demographic structure, across an altitudinal gradient. We used demographic data to model population persistence under climate change predictions of upward range contraction incorporating long-term climatic records for Lord Howe Island. We also accounted for alternative levels of rat predation into the model to reflect management options for control. We found that Lord Howe Island is getting warmer and drier and quantified the degree of temperature change with altitude (0.9 °C per 100 m. For H. canterburyana, differences in development rates, population structure, reproductive output and population growth rate were identified between altitudes. In contrast, genetic variation was high and did not vary with altitude. There is no evidence of an upward range contraction as was predicted and recruitment was greatest at lower altitudes. Our models predicted slow population decline in the species and that the highest altitude populations are under greatest threat of extinction. Removal of rat predation would significantly enhance future persistence of this species.

Symmetric webs, Jones-Wenzl recursions and q-Howe duality

DEFF Research Database (Denmark)

Rose, David; Tubbenhauer, Daniel

We define and study the category of symmetric sl2-webs. This category is a combinatorial description of the category of all finite dimensional quantum sl2-modules. Explicitly, we show that (the additive closure of) the symmetric sl2-spider is (braided monoidally) equivalent to the latter. Our mai...... tool is a quantum version of symmetric Howe duality. As a corollary of our construction, we provide new insight into Jones-Wenzl projectors and the colored Jones polynomials....

Resource-use efficiencies of three indigenous tree species planted in resource islands created by shrubs: implications for reforestation of subtropical degraded shrublands

Science.gov (United States)

Nan Liu; Qinfeng Guo

2012-01-01

Shrub resource islands are characterized by resources accumulated shrubby areas surrounded by relative barren soils. This research aims to determine resource-use efficiency of native trees species planted on shrub resource islands, and to determine how the planted trees may influence the resource islands in degraded shrublands in South China. Shrub (Rhodomyrtus...

Biology and impacts of Pacific island invasive species. 2. Boiga irregularis, the Brown Tree Snake (Reptilia: Colubridae)

Science.gov (United States)

Rodda, Gordon H.; Savidge, Julie A.

2007-01-01

The Brown Tree Snake, Boiga irregularis (Merrem, 1802), was accidentally transported to the island of Guam shortly after World War II. Over the following two decades it spread throughout the island with little public or professional recognition of its extent or impacts. This secretive nocturnal arboreal snake occurs in all habitats on Guam, from grasslands to forests. Under the right conditions, it is capable of high rates of reproduction and population growth. The Brown Tree Snake caused the extirpation of 13 of Guam's 22 native breeding birds and contributed to the extirpation of several species of native bats and lizards. Guam's 12 forest birds were especially impacted, with 10 species eliminated and the other two severely reduced. In addition, the snake continues to substantially impact domestic poultry, pets, the island's electrical power infrastructure, and human health. To protect other vulnerable Pacific islands, the U.S. government annually spends several million dollars inspecting cargo outbound from Guam to exclude Brown Tree Snakes. Cargo destinations most at risk are in Micronesia, especially the Northern Mariana Islands, but Guam also has direct air transportation links to Hawai'i that will soon be supplemented with direct ship traffic. Ultimately, all Pacific islands are at risk but especially those obtaining cargo through Guam. ?? 2007 by University of Hawai'i Press. All rights reserved.

Veracity and rhetoric in paediatric medicine: a critique of Svoboda and Van Howe's response to the AAP policy on infant male circumcision

NARCIS (Netherlands)

Morris, Brian J.; Tobian, Aaron A. R.; Hankins, Catherine A.; Klausner, Jeffrey D.; Banerjee, Joya; Bailis, Stefan A.; Moses, Stephen; Wiswell, Thomas E.

2014-01-01

In a recent issue of the Journal of Medical Ethics, Svoboda and Van Howe commented on the 2012 change in the American Academy of Pediatrics (AAP) policy on newborn male circumcision, in which the AAP stated that benefits of the procedure outweigh the risks. Svoboda and Van Howe disagree with the AAP

Understanding Developmental Reversals in False Memory: Reply to Ghetti (2008) and Howe (2008)

Science.gov (United States)

Brainerd, C. J.; Reyna, V. F.; Ceci, S. J.; Holliday, R. E.

2008-01-01

S. Ghetti (2008) and M. L. Howe (2008) presented probative ideas for future research that will deepen scientific understanding of developmental reversals on false memory and establish boundary conditions for these counterintuitive patterns. Ghetti extended the purview of current theoretical principles by formulating hypotheses about how…

Survey of diseases caused by Fusarium spp. on palm trees in the Canary Islands

Directory of Open Access Journals (Sweden)

Julio Hernández-Hernández

2010-05-01

Full Text Available Between 2006 and 2007, palm trees growing in both gardens and public parks and natural palm groves in the Canary Islands (Spain, and showing symptoms of wilt and dieback, were surveyed. Isolates were recovered from affected tissues of the crowns, leaves and vascular fragments on potato dextrose agar (PDA. After incubation, the Fusarium spp. colonies recovered were single-spored. They were transferred to PDA and Spezieller Nahrstoffarmer Agar (SNA for morphological identification. Identification of Fusarium oxysporum f. sp. Canariensis was confirmed by PCR with the specific primers HK66 and HK67, which amplified a fragment of 567 bp. Fusarium wilt caused by F. oxysporum f. sp. canariensis was found on 54 Phoenix canariensis trees growing on four islands: Gran Canaria, Fuerteventura, La Palma and Tenerife. F. proliferatum occurred on fifteen palms (10 P. canariensis, 1 P. dactylifera, 3 Roystonea regia and 1 Veitchia joannis located in Gran Canaria, Fuerteventura and Tenerife. Both these Fusarium species were found only in diseased palms from gardens and public parks, but not in natural palm groves. The results show that Fusarium wilt of P. canariensis is common in the Canary Islands and for the first time report F. proliferatum affecting different palm species in those islands.

The brown tree snake, an introduced pest species in the central Pacific Islands

Science.gov (United States)

Fritts, Thomas H.; Rodda, Gordon H.

1989-01-01

The reproduction of endangered Mariana crows (Corvus kubaryi) is intensively monitored, nests are protected, and (when necessary) eggs or young are moved to the safety of lab conditions until they are less vulnerable to the threats in natural habitats. Barriers on tree trunks and judicious pruning of adjacent trees are used in attempts to exclude snakes from nest trees. Two birds unique to Guam--the Micronesian kingfisher (Halcyon cinnamomina cinnamomina) and Guam rail (Gallirallus owstoni)-- are maintained at captive propagation facilities on Guam and in mainland zoos. Studies of these and other species, in captivity and on nearby islands, are underway to bolster our biological understanding of their behavior, reproduction, habitat use, and population biology.

A collaborative archaeological research and conservation project for Moriori carved trees (rakau momori), Rekohu (Chatham Island)

International Nuclear Information System (INIS)

Barber, I.; Maxwell, J.

2011-01-01

In January-February 2010 a conservation and site-recording project began on Rekohu (Chatham Island) to locate, assess and digitally scan archaeological carved trees known as rakau momori ('dendroglyphs'). This paper briefly considers earlier work on carved trees before reporting preliminary and anticipated outcomes from our recent collaborative rakau momori archaeological project. 14 refs., 9 figs., 2 tabs.

Vegetation assessment of forests of Pagan Island, Commonwealth of the Northern Mariana Islands

Science.gov (United States)

Pratt, Linda W.

2011-01-01

As part of the Marianas Expedition Wildlife Surveys-2010, the forest vegetation of the island of Pagan, Commonwealth of the Northern Mariana Islands (CNMI), was sampled with a series of systematic plots along 13 transects established for monitoring forest bird populations. Shrubland and grassland were also sampled in the northern half of the island. Data collected were woody plant density, tree diameter at breast height, woody plant density in height classes below 2 m, and ground cover measured with the point-intercept method. Coconut forests (Cocos nucifera) were generally found to have low native tree diversity, little regeneration of trees and shrubs in the forest understory, and little live ground cover. The sole exception was a coconut-dominated forest of the northeast side of the island that exhibited high native tree diversity and a large number of young native trees in the understory. Ironwood (Casuarina equisetifolia) forests on the northern half of the island were nearly monocultures with almost no trees other than ironwood in vegetation plots, few woody plants in the understory, and low ground cover dominated by native ferns. Mixed native forests of both northern and southern sections of the island had a diversity of native tree species in both the canopy and the sparse understory. Ground cover of native forests in the north had a mix of native and alien species, but that of the southern half of the island was dominated by native ferns and woody plants.

Holocene Tree Line and Climate Change on the Queen Charlotte Islands, Canada

Science.gov (United States)

Pellatt, Marlow G.; Mathewes, Rolf W.

1997-07-01

Palynological study of two subalpine ponds on the Queen Charlotte Islands reveals changes in tree line and climate during the Holocene. The findings agree with previous reconstructions, from nearby Louise Pond on the Queen Charlotte Islands, that suggest a warmer-than-present climate and higher-than-present tree lines in the early Holocene (ca. 9600-6600 14C yr B.P.). Basal ages at SC1 Pond and Shangri-La Bog indicate that the basins did not hold permanent water before 7200 14C yr B.P., consistent with a warmer and drier early Holocene previously inferred from Louise Pond. Pollen and plant macrofossils indicate the initial establishment of subalpine conditions by 6090 ± 90 14C yr B.P., similar to the 5790 ± 130 14C yr B.P. age for cooling inferred from Louise Pond. Conditions similar to present were established at SC1 Pond by 3460 ± 100 14C yr B.P., confirming the previous estimate of 3400 14C yr B.P. at Louise Pond. This 3400 14C yr B.P. vegetation shift on the Queen Charlotte Islands corresponds with the beginning of the Tiedemann glacial advance in the south-coastal mountains of British Columbia (ca. 3300 14C yr B.P.), the Peyto and Robson glacial advances between 3300 and 2800 14C yr B.P. in the Rocky Mountains, and climatic cooling inferred from palynological studies throughout southern British Columbia, northern Washington, and southeast Alaska. These findings confirm that changes in regional climate influenced changes in vegetation in coastal British Columbia.

A review of the conservation status of the threatened western Indian Ocean island tree Pisonia sechellarum (Nyctaginaceae

Directory of Open Access Journals (Sweden)

J. Gerlach

2013-08-01

Full Text Available The status of the tree Pisonia sechellarum F. Friedmann (Nyctaginaceae endemic to the western Indian Ocean is reviewed. Five populations have been located: four in the Seychelles Islands (three on Silhouette Island and one on Mahe and one on Mayotte. The species is associated with montane forest and ravine habitats and the genetic identity of different populations remains to be investigated. This species is considered to be endangered.

The Lauramann Howe Russell Papers: a Window into Critical Care Medicine during the American Civil War.

Science.gov (United States)

Gorbaty, Benjamin

2017-10-01

The Civil War influenced all aspects of American society and culture, including the field of medicine and critical care. Union physician Lauramann Howe Russell's letter to his daughter, Ellen Howe, written on October 19, 1862, illustrates the changes in hospital construction, gender roles in healthcare and medical treatments which revolutionized healthcare during the Civil War. This letter offers a glimpse of the medical care of wounded soldiers during the early years of the Civil War. In describing his conversion hospital, he reveals the precursor to the new hospital construction which would greatly influence hospital design for decades to come. His description of women volunteers hints at the evolving role and growing importance of women in healthcare. Finally, the advancements in surgical and medical practice which developed during the Civil War are embodied in Russell's descriptions of his patients. His letter freezes a moment in medical history, bridging the gap between archaic medical practice and modern critical care. Copyright © 2017 Elsevier Inc. All rights reserved.

Evolutionary history of a vanishing radiation: isolation-dependent persistence and diversification in Pacific Island partulid tree snails.

Science.gov (United States)

Lee, Taehwan; Li, Jingchun; Churchill, Celia K C; Foighil, Diarmaid Ó

2014-09-24

Partulid tree snails are endemic to Pacific high islands and have experienced extraordinary rates of extinction in recent decades. Although they collectively range across a 10,000 km swath of Oceania, half of the family's total species diversity is endemic to a single Eastern Pacific hot spot archipelago (the Society Islands) and all three partulid genera display highly distinctive distributions. Our goal was to investigate broad scale (range wide) and fine scale (within-Society Islands) molecular phylogenetic relationships of the two widespread genera, Partula and Samoana. What can such data tell us regarding the genesis of such divergent generic distribution patterns, and nominal species diversity levels across Oceania? Museum, captive (zoo) and contemporary field specimens enabled us to genotype 54 of the ~120 recognized species, including many extinct or extirpated taxa, from 14 archipelagoes. The genera Partula and Samoana are products of very distinct diversification processes. Originating at the western edge of the familial range, the derived genus Samoana is a relatively recent arrival in the far eastern archipelagoes (Society, Austral, Marquesas) where it exhibits a stepping-stone phylogenetic pattern and has proven adept at both intra-and inter- archipelago colonization. The pronounced east-west geographic disjunction exhibited by the genus Partula stems from a much older long-distance dispersal event and its high taxonomic diversity in the Society Islands is a product of a long history of within-archipelago diversification. The central importance of isolation for partulid lineage persistence and diversification is evident in time-calibrated phylogenetic trees that show that remote archipelagoes least impacted by continental biotas bear the oldest clades and/or the most speciose radiations. In contemporary Oceania, that isolation is being progressively undermined and these tree snails are now directly exposed to introduced continental predators

Soil N mineralization profiles of co-existing woody vegetation islands at the alpine tree line

Czech Academy of Sciences Publication Activity Database

Wang, L.; Godbold, Douglas

2017-01-01

Roč. 136, 5-6 (2017), s. 881-892 ISSN 1612-4669 R&D Projects: GA MŠk(CZ) LO1415 Institutional support: RVO:67179843 Keywords : Tree line * Soil N mineralization * in situ field incubation * Soil N availability * Resin capsule * Woody vegetation islands Subject RIV: DF - Soil Science OBOR OECD: Soil science Impact factor: 2.017, year: 2016

Perception of Pine Trees among Citizens of the Balearic Islands: Analysis and Description of Some Mistaken Ideas

Science.gov (United States)

Sureda-Negre, Jaume; Catalan-Fernandez, Albert; Comas-Forgas, Ruben; Fagan, Geoffrey; Llabres-Bernat, Antonia

2011-01-01

In this article, the authors analyze evidence regarding the dissemination of mistaken ideas concerning the presence and function of pine trees ("Pinus halepensis") in a Mediterranean archipelago: the Balearic Islands (Spain). The main errors concerning the natural vegetation that are disseminated among citizens by the forest management…

Preliminary Use of Uric Acid as a Biomarker for Wading Birds on Everglades Tree Islands, Florida, United States

Science.gov (United States)

Bates, Anne L.; Orem, William H.; Newman, Susan; Gawlik, Dale E.; Lerch, Harry E.; Corum, Margo D.; Van Winkle, Monica

2010-01-01

Concentrations of organic biomarkers and concentrations of phosphorus in soil cores can potentially be used as proxies for historic population densities of wading birds on tree islands in the Florida Everglades. This report focuses on establishing a link between the organic biomarker uric acid found in wading bird guano and the high phosphorus concentrations in tree island soils in the Florida Everglades. Uric acid was determined in soil core sections, in surface samples, and in bird guano by using a method of high-performance liquid chromatography-mass spectrometry (HPLC-MS) developed for this purpose. Preliminary results show an overall correlation between uric acid and total phosphorus in three soil cores, with a general trend of decreasing concentrations of both uric acid and phosphorus with depth. However, we have also found no uric acid in a soil core having high concentrations of phosphorus. We believe that this result may be explained by different geochemical circumstances at that site.

Estimation on rubber tree disturbance caused by typhoon Damery (200518) with Landsat and MODIS data in Hainan Island of China

Science.gov (United States)

Tan, Chenyan; Fang, Weihua; Li, Jian

2016-04-01

In 2005, Typhoon Damery (200518) caused severe damage to the rubber trees in Hainan Island with its destructive winds and rainfall. Selection of proper vegetation indices using multi-source remote sensing data is critical to the assessment of forest disturbance and damage loss for this event. In this study, we will compare the performance of seven vegetation indices derived from MODIS and Landsat TM imageries prior to and after typhoon Damery, in order to select an optimal index for identifying rubber tree disturbance. The indices to be compared are normalized difference vegetation index (NDVI), Normalized Difference Water Index (NDWI), Normalized Difference Infrared Index (NDII), Enhanced vegetation index (EVI), Leaf area index (LAI), forest z-score (IFZ), and Disturbance Index (DI). The ground truth data of rubber tree damage collected through field investigation was used to verify and compare the results. Our preliminary result for the area with ground-truth data shows that DI has the most significant performance for disturbance detection for this typhoon event. This index DI is then applied to all the areas in Hainan Island hit by Darmey to evaluate the overall forest damage severity. At last, rubber tree damage severity is analyzed with other typhoon hazard factors such as wind, topography, soil and precipitation.

Deposition of organic material in a coral reef lagoon, One Tree Island, Great Barrier Reef

Science.gov (United States)

Koop, K.; Larkum, A. W. D.

1987-07-01

Deposition of organic material was measured at four sites on One Tree Island coral reef using fixed sediment traps. Although no reliable data were obtained for the reef crest area because of problems of resuspension, mean deposition in the backreef area amounted to some 4 g organic C m -2 day -1 whereas in the lagoon it was about 1·5 g C m -2 day -1. This amounted to mean nitrogen deposition rates of 160 and 95 mg N m -2 day -1, respectively. As primary production by turf algae, the principal producers at One Tree Island, has been estimated at about 2·3 g C m -2 day -1 for the whole reef system and the weighted mean carbon deposition is estimated at 2·2 g C m -2 day -1, it is clear that the carbon produced by plants is largely retained in the system. Nitrogen deposition, on the other hand, amounted to only about 60% of that produced by turf algae and it must be assumed that much of this leached into the water during sedimentation. Losses of nitrogen may be minimized by incorporation of dissolved nitrogen by pelagic microheterotrophs which may in turn be consumed by filter feeders before they leave the reef.

The Effect of Tree Spacing and Size in Urban Areas: Strategies for Mitigating High Temperature in Urban Heat Islands

Science.gov (United States)

Berry, R.; Shandas, V.; Makido, Y.

2017-12-01

Many cities are unintentionally designed to be heat sinks, which absorb the sun's short-wave radiation and reemit as long-wave radiation. Long time reorganization of this `urban heat island' (UHI) phenomena has led researchers and city planners into developing strategies for reducing ambient temperatures through urban design. Specifically, greening areas have proven to reduce the temperature in UHI's, including strategies such as green streets, green facades, and green roofs have been implemented. Among the scientific community there is promoted study of how myriad greening strategies can reduce temperature, relatively limited work has focused on the distribution, density, and quantity of tree campaigns. This paper examines how the spacing and size of trees reduce temperatures differently. A major focus of the paper is to understand how to lower the temperature through tree planting, and provide recommendations to cities that are attempting to solve their own urban heat island issues. Because different cities have different room for planting greenery, we examined which strategies are more efficient given an area constraint. Areas that have less available room might not be able to plant a high density of trees. We compared the different experimental groups varying in density and size of trees against the control to see the effect the trees had. Through calibration with local weather stations, we used a micrometeorology program (ENVI-Met) to model and simulate the different experimental models and how they affect the temperature. The results suggest that some urban designs can reduce ambient temperatures by over 7 0C, and the inclusion of large form trees have the greatest contribution, by reducing temperatures over 15 0C. The results suggest that using specific strategies that combine placement of specific tree configurations with alternative distribution of urban development patterns can help to solve the current challenges of UHI's, and thereby support management

Gap Winds in a Fjord: Howe Sound, British Columbia.

Science.gov (United States)

Jackson, Peter L.

1993-01-01

Gap, outflow, or Squamish wind, is the cold low level seaward flow of air through fjords which dissect the coastal mountain barrier of northwestern North America. These flows, occurring mainly during winter, can be strong, threatening safety, economic activity and comfort. Howe Sound gap winds were studied using a combination of observations and several types of models. Observations of winds in Howe Sound showed that gap wind strength varied considerably along the channel, across the channel and vertically. Generally, winds increase down the channel, are strongest along the eastern side, and are below 1000 m depth. Observations were unable to answer all questions about gap winds due to data sparseness, particularly in the vertical direction. Therefore, several modelling approaches were used. The modelling began with a complete 3-dimensional quasi-Boussinesq model (CSU RAMS) and ended with the creation and testing of models which are conceptually simpler, and more easily interpreted and manipulated. A gap wind simulation made using RAMS was shown to be mostly successful by statistical evaluation compared to other mesoscale simulations, and by visual inspection of the fields. The RAMS output, which has very high temporal and spatial resolution, provided much additional information about the details of gap flow. In particular, RAMS results suggested a close analogy between gap wind and hydraulic channel flow, with hydraulic features such as supercritical flow and hydraulic jumps apparent. These findings imply gap wind flow could potentially be represented by much simpler models. The simplest possible models containing pressure gradient, advection and friction but not incorporating hydraulic effects, were created, tested, and found lacking. A hydraulic model, which in addition incorporates varying gap wind height and channel geometry, was created and shown to successfully simulate gap winds. Force balance analysis from RAMS and the hydraulic model showed that pressure

A Baseline Measure of Tree and Gastropod Biodiversity in Replanted and Natural Mangrove Stands in Malaysia: Langkawi Island and Sungai Merbok

Science.gov (United States)

Hookham, Brenda; Shau-Hwai, Aileen Tan; Dayrat, Benoit; Hintz, William

2014-01-01

The diversities of mangrove trees and of their associated gastropods were assessed for two mangrove regions on the west coast of Peninsular Malaysia: Langkawi Island and Sungai Merbok. The mangrove area sampled on Langkawi Island was recently logged and replanted, whereas the area sampled in Sungai Merbok was part of a protected nature reserve. Mangrove and gastropod diversity were assessed in four 50 m2 (10 × 5 m) sites per region. The species richness (S), Shannon Index (H’) and Evenness Index (J’) were calculated for each site, and the mean S, H’ and J’ values were calculated for each region. We report low tree and gastropod S, H’ and J’ values in all sites from both regions. For Langkawi Island, the mean S, H’ and J’ values for mangrove trees were S = 2.00±0, H’ = 0.44±0.17 and J’ = 0.44±0.17; the mean S, H’ and J’ values for gastropods were S = 4.00±1.63, H’ = 0.96±0.41 and J’ = 0.49±0.06. In Sungai Merbok, the mean S, H’ and J’ values for mangrove trees were S = 1.33±0.58, H’ = 0.22±0.39 and J’ = 0.22 ±0.39; the mean S, H’ and J’ values for gastropods were S = 4.75±2.22, H’ = 1.23±0.63 and J’ = 0.55±0.12. This study emphasises the need for baseline biodiversity measures to be established in mangrove ecosystems to track the impacts of anthropogenic disturbances and to inform management and restoration efforts. PMID:25210584

Dendrochronology of Strain-Relaxed Islands

International Nuclear Information System (INIS)

Merdzhanova, T.; Kiravittaya, S.; Rastelli, A.; Stoffel, M.; Denker, U.; Schmidt, O.G.

2006-01-01

We report on the observation and study of tree-ring structures below dislocated SiGe islands (superdomes) grown on Si(001) substrates. Analogous to the study of tree rings (dendrochronology), these footprints enable us to gain unambiguous information on the growth and evolution of superdomes and their neighboring islands. The temperature dependence of the critical volume for dislocation introduction is measured and related to the composition of the islands. We show clearly that island coalescence is the dominant pathway towards dislocation nucleation at low temperatures, while at higher temperatures anomalous coarsening is effective and leads to the formation of a depletion region around superdomes

Dendrochronology of strain-relaxed islands.

Science.gov (United States)

Merdzhanova, T; Kiravittaya, S; Rastelli, A; Stoffel, M; Denker, U; Schmidt, O G

2006-06-09

We report on the observation and study of tree-ring structures below dislocated SiGe islands (superdomes) grown on Si(001) substrates. Analogous to the study of tree rings (dendrochronology), these footprints enable us to gain unambiguous information on the growth and evolution of superdomes and their neighboring islands. The temperature dependence of the critical volume for dislocation introduction is measured and related to the composition of the islands. We show clearly that island coalescence is the dominant pathway towards dislocation nucleation at low temperatures, while at higher temperatures anomalous coarsening is effective and leads to the formation of a depletion region around superdomes.

Dungeons, Gratings, and Black Rooms: A Defense of Double-Anchoring Theory and a Reply to Howe et al. (2007)

Science.gov (United States)

Bressan, Paola

2007-01-01

Replies to comments mad by Howe et al. on the current author's original article. The double-anchoring theory of lightness (P. Bressan, 2006b) assumes that any given region belongs to a set of frameworks, created by Gestalt grouping principles, and receives a provisional lightness within each of them; the region's final lightness is a weighted…

Soil CO2 concentrations and efflux dynamics of a tree island in the Pantanal wetland

Science.gov (United States)

Lathuillière, Michael J.; Pinto, Osvaldo B.; Johnson, Mark S.; Jassal, Rachhpal S.; Dalmagro, Higo J.; Leite, Nei K.; Speratti, Alicia B.; Krampe, Daniela; Couto, Eduardo G.

2017-08-01

The Pantanal is the largest tropical wetland on the planet, and yet little information is available on the biome's carbon cycle. We used an automatic station to measure soil CO2 concentrations and oxidation-reduction potential over the 2014 and 2015 flood cycles of a tree island in the Pantanal that is immune to inundation during the wetland's annual flooding. The soil CO2 concentration profile was then used to estimate soil CO2 efflux over the two periods. In 2014, subsurface soil saturation at 0.30 m depth created conditions in that layer that led to CO2 buildup close to 200,000 ppm and soil oxidation-reduction potential below -300 mV, conditions that were not repeated in 2015 due to annual variability in soil saturation at the site. Mean CO2 efflux over the 2015 flood cycle was 0.023 ± 0.103 mg CO2-C m-2 s-1 representing a total annual efflux of 593 ± 2690 mg CO2-C m-2 y-1. Unlike a nearby tree island site that experiences full inundation during the wet season, here the soil dried quickly following repeated rain events throughout the year, which led to the release of CO2 pulses from the soil. This study highlights not only the complexity and heterogeneity in the Pantanal's carbon balance based on differences in topography, flood cycles, and vegetation but also the challenges of applying the gradient method in the Pantanal due to deviations from steady state conditions.

Determination of the genetic structure of remnant Morus boninensis Koidz. trees to establish a conservation program on the Bonin Islands, Japan

Directory of Open Access Journals (Sweden)

Nobushima Fuyuo

2006-10-01

Full Text Available Abstract Background Morus boninensis, is an endemic plant of the Bonin (Ogasawara Islands of Japan and is categorized as "critically endangered" in the Japanese red data book. However, little information is available about its ecological, evolutionary and genetic status, despite the urgent need for guidelines for the conservation of the species. Therefore, we adopted Moritz's MU concept, based on the species' current genetic structure, to define management units and to select mother tree candidates for seed orchards. Results Nearly all individuals of the species were genotyped on the basis of seven microsatellite markers. Genetic diversity levels in putative natural populations were higher than in putative man-made populations with the exception of those on Otouto-jima Island. This is because a limited number of maternal trees are likely to have been used for seed collection to establish the man-made populations. A model-based clustering analysis clearly distinguished individuals into nine clusters, with a large difference in genetic composition between the population on Otouto-jima Island, the putative natural populations and the putative man-made populations. The Otouto-jima population appeared to be genetically differentiated from the others; a finding that was also supported by pairwise FST and RST analysis. Although multiple clusters were detected in the putative man-made populations, the pattern of genetic diversity was monotonous in comparison to the natural populations. Conclusion The genotyping by microsatellite markers revealed strong genetic structures. Typically, artificial propagation of this species has ignored the genetic structure, relying only on seeds from Otouto-jima for replanting on other islands, because of a problem with inter-specific hybridization on Chichi-jima and Haha-jima Islands. However, this study demonstrates that we should be taking into consideration the genetic structure of the species when designing a

Determination of the genetic structure of remnant Morus boninensis Koidz. trees to establish a conservation program on the Bonin Islands, Japan.

Science.gov (United States)

Tani, Naoki; Yoshimaru, Hiroshi; Kawahara, Takayuki; Hoshi, Yoshio; Nobushima, Fuyuo; Yasui, Takaya

2006-10-11

Morus boninensis, is an endemic plant of the Bonin (Ogasawara) Islands of Japan and is categorized as "critically endangered" in the Japanese red data book. However, little information is available about its ecological, evolutionary and genetic status, despite the urgent need for guidelines for the conservation of the species. Therefore, we adopted Moritz's MU concept, based on the species' current genetic structure, to define management units and to select mother tree candidates for seed orchards. Nearly all individuals of the species were genotyped on the basis of seven microsatellite markers. Genetic diversity levels in putative natural populations were higher than in putative man-made populations with the exception of those on Otouto-jima Island. This is because a limited number of maternal trees are likely to have been used for seed collection to establish the man-made populations. A model-based clustering analysis clearly distinguished individuals into nine clusters, with a large difference in genetic composition between the population on Otouto-jima Island, the putative natural populations and the putative man-made populations. The Otouto-jima population appeared to be genetically differentiated from the others; a finding that was also supported by pairwise FST and RST analysis. Although multiple clusters were detected in the putative man-made populations, the pattern of genetic diversity was monotonous in comparison to the natural populations. The genotyping by microsatellite markers revealed strong genetic structures. Typically, artificial propagation of this species has ignored the genetic structure, relying only on seeds from Otouto-jima for replanting on other islands, because of a problem with inter-specific hybridization on Chichi-jima and Haha-jima Islands. However, this study demonstrates that we should be taking into consideration the genetic structure of the species when designing a propagation program for the conservation of this species.

Soil surface temperatures reveal moderation of the urban heat island effect by trees and shrubs.

Science.gov (United States)

Edmondson, J L; Stott, I; Davies, Z G; Gaston, K J; Leake, J R

2016-09-19

Urban areas are major contributors to air pollution and climate change, causing impacts on human health that are amplified by the microclimatological effects of buildings and grey infrastructure through the urban heat island (UHI) effect. Urban greenspaces may be important in reducing surface temperature extremes, but their effects have not been investigated at a city-wide scale. Across a mid-sized UK city we buried temperature loggers at the surface of greenspace soils at 100 sites, stratified by proximity to city centre, vegetation cover and land-use. Mean daily soil surface temperature over 11 months increased by 0.6 °C over the 5 km from the city outskirts to the centre. Trees and shrubs in non-domestic greenspace reduced mean maximum daily soil surface temperatures in the summer by 5.7 °C compared to herbaceous vegetation, but tended to maintain slightly higher temperatures in winter. Trees in domestic gardens, which tend to be smaller, were less effective at reducing summer soil surface temperatures. Our findings reveal that the UHI effects soil temperatures at a city-wide scale, and that in their moderating urban soil surface temperature extremes, trees and shrubs may help to reduce the adverse impacts of urbanization on microclimate, soil processes and human health.

Roles of Urban Tree Canopy and Buildings in Urban Heat Island Effects: Parameterization and Preliminary Results

Science.gov (United States)

Loughner, Christopher P.; Allen, Dale J.; Zhang, Da-Lin; Pickering, Kenneth E.; Dickerson, Russell R.; Landry, Laura

2012-01-01

Urban heat island (UHI) effects can strengthen heat waves and air pollution episodes. In this study, the dampening impact of urban trees on the UHI during an extreme heat wave in the Washington, D.C., and Baltimore, Maryland, metropolitan area is examined by incorporating trees, soil, and grass into the coupled Weather Research and Forecasting model and an urban canopy model (WRF-UCM). By parameterizing the effects of these natural surfaces alongside roadways and buildings, the modified WRF-UCM is used to investigate how urban trees, soil, and grass dampen the UHI. The modified model was run with 50% tree cover over urban roads and a 10% decrease in the width of urban streets to make space for soil and grass alongside the roads and buildings. Results show that, averaged over all urban areas, the added vegetation decreases surface air temperature in urban street canyons by 4.1 K and road-surface and building-wall temperatures by 15.4 and 8.9 K, respectively, as a result of tree shading and evapotranspiration. These temperature changes propagate downwind and alter the temperature gradient associated with the Chesapeake Bay breeze and, therefore, alter the strength of the bay breeze. The impact of building height on the UHI shows that decreasing commercial building heights by 8 m and residential building heights by 2.5 m results in up to 0.4-K higher daytime surface and near-surface air temperatures because of less building shading and up to 1.2-K lower nighttime temperatures because of less longwave radiative trapping in urban street canyons.

Ecological implications of Laurel Wilt infestation on Everglades Tree Islands, southern Florida

Science.gov (United States)

Snyder, James R.

2014-01-01

, laurel wilt disease also kills other native trees that are members of the laurel family, including swamp bay (Persea palustris), silk bay (Persea borbonia var. humilis), and sassafras (Sassafras albidum), as well as the economically important cultivated avocado (Persea americana) (Fraedrich and others, 2008). This paper is concerned primarily with swamp bay, an important component of Everglades tree islands.The spread of the redbay ambrosia beetle and its fungal symbiont has been very rapid, exceeding model predictions (Koch and Smith, 2008); by 2011, laurel wilt disease was found from the southern coastal plain of North Carolina to southern peninsular Florida. The first redbay ambrosia beetle was trapped in Miami-Dade County in March 2010, and laurel wilt disease was discovered in swamp bays in February 2011 and in commercial avocado groves about a year later (Kendra and others, 2013). By 2013, laurel wilt disease was seen in swamp bays throughout the southern Everglades in Everglades National Park, Big Cypress National Preserve, and Water Conservation Areas (WCAs) 3A and 3B (Rodgers and others, 2014).

Modeling Caribbean tree stem diameters from tree height and crown width measurements

Science.gov (United States)

Thomas Brandeis; KaDonna Randolph; Mike Strub

2009-01-01

Regression models to predict diameter at breast height (DBH) as a function of tree height and maximum crown radius were developed for Caribbean forests based on data collected by the U.S. Forest Service in the Commonwealth of Puerto Rico and Territory of the U.S. Virgin Islands. The model predicting DBH from tree height fit reasonably well (R2 = 0.7110), with...

Strategy to control the invasive alien tree Miconia calvescens in Pacific islands: Eradication, containment or something else?

Science.gov (United States)

Meyer, Jean-Yves; Loope, Lloyd; Goarant, Anne-Claire; Veitch, C.R.; Clout, M.N.; Towns, D. R.

2011-01-01

Miconia calvescens (Melastomataceae) is a notorious plant invader in the tropical islands of French Polynesia, Hawaii and New Caledonia. A small tree native to Central and South America, it was first introduced as an ornamental in private botanic gardens in Tahiti (1937), Honolulu (1961), and Nouméa (1970s) where it escaped, became naturalised, and formed dense monospecific stands. More than 80,000 ha are currently invaded in French Polynesia, 10,000 ha in the Hawaiian Islands and 140 ha in New Caledonia. Control programmes have been under way in the Hawaiian Islands (Oahu, Maui, Hawaii, Kauai) and French Polynesia (Raiatea, Tahaa, Nuku Hiva, Fatu Hiva) since the early 1990s, and in New Caledonia (Province Sud) since 2006. Despite more than 15 years of intensive control efforts and millions of plants destroyed, eradication has not been achieved in any of these islands, mainly because the species has multiple features that thwart its elimination (e.g., prolific seed production, active dispersal by alien and native frugivorous birds, large and persistent soil seed bank, shade-tolerance), combined with the difficulty of detecting and destroying plants on rough terrain and steep slopes, insufficient control frequency, and limited financial and human resources. Miconia’s life cycle requires at least four years growth from seedling to fruiting. Consequently, prevention of fruit production may be an effective management strategy for small populations. This “juvenilization” process may allow the eradication of small populations when carefully conducted over a quarter century. 

The Urban Tree as a Tool to Mitigate the Urban Heat Island in Mexico City: A Simple Phenomenological Model.

Science.gov (United States)

Ballinas, Mónica; Barradas, Víctor L

2016-01-01

The urban heat island (UHI) is mainly a nocturnal phenomenon, but it also appears during the day in Mexico City. The UHI may affect human thermal comfort, which can influence human productivity and morbidity in the spring/summer period. A simple phenomenological model based on the energy balance was developed to generate theoretical support of UHI mitigation in Mexico City focused on the latent heat flux change by increasing tree coverage to reduce sensible heat flux and air temperature. Half-hourly data of the urban energy balance components were generated in a typical residential/commercial neighborhood of Mexico City and then parameterized using easily measured variables (air temperature, humidity, pressure, and visibility). Canopy conductance was estimated every hour in four tree species, and transpiration was estimated using sap flow technique and parameterized by the envelope function method. Averaged values of net radiation, energy storage, and sensible and latent heat flux were around 449, 224, 153, and 72 W m, respectively. Daily tree transpiration ranged from 3.64 to 4.35 Ld. To reduce air temperature by 1°C in the studied area, 63 large would be required per hectare, whereas to reduce the air temperature by 2°C only 24 large trees would be required. This study suggests increasing tree canopy cover in the city cannot mitigate UHI adequately but requires choosing the most appropriate tree species to solve this problem. It is imperative to include these types of studies in tree selection and urban development planning to adequately mitigate UHI. Copyright © by the American Society of Agronomy, Crop Science Society of America, and Soil Science Society of America, Inc.

Heat Island Compendium

Science.gov (United States)

Heat islands can be mitigated through measures like planting trees and vegetation, installing green roofs and cool roofs, and using cool pavements. The compendium describes all of these strategies and shows how communities around the country are being used

The Solomon Islands tsunami of 6 February 2013 field survey in the Santa Cruz Islands

Science.gov (United States)

Fritz, H. M.; Papantoniou, A.; Biukoto, L.; Albert, G.

2013-12-01

On February 6, 2013 at 01:12:27 UTC (local time: UTC+11), a magnitude Mw 8.0 earthquake occurred 70 km to the west of Ndendo Island (Santa Cruz Island) in the Solomon Islands. The under-thrusting earthquake near a 90° bend, where the Australian plate subducts beneath the Pacific plate generated a locally focused tsunami in the Coral Sea and the South Pacific Ocean. The tsunami claimed the lives of 10 people and injured 15, destroyed 588 houses and partially damaged 478 houses, affecting 4,509 people in 1,066 households corresponding to an estimated 37% of the population of Santa Cruz Island. A multi-disciplinary international tsunami survey team (ITST) was deployed within days of the event to document flow depths, runup heights, inundation distances, sediment and coral boulder depositions, land level changes, damage patterns at various scales, performance of the man-made infrastructure and impact on the natural environment. The 19 to 23 February 2013 ITST covered 30 locations on 4 Islands: Ndendo (Santa Cruz), Tomotu Noi (Lord Howe), Nea Tomotu (Trevanion, Malo) and Tinakula. The reconnaissance completely circling Ndendo and Tinakula logged 240 km by small boat and additionally covered 20 km of Ndendo's hard hit western coastline by vehicle. The collected survey data includes more than 80 tsunami runup and flow depth measurements. The tsunami impact peaked at Manoputi on Ndendo's densely populated west coast with maximum tsunami height exceeding 11 m and local flow depths above ground exceeding 7 m. A fast tide-like positive amplitude of 1 m was recorded at Lata wharf inside Graciosa Bay on Ndendo Island and misleadingly reported in the media as representative tsunami height. The stark contrast between the field observations on exposed coastlines and the Lata tide gauge recording highlights the importance of rapid tsunami reconnaissance surveys. Inundation distance and damage more than 500 m inland were recorded at Lata airport on Ndendo Island. Landslides were

Development and characterization of microsatellite markers for Hibiscus glaber Matsum. ex Nakai, an endemic tree species of the oceanic Bonin Islands, Japan.

Science.gov (United States)

Ohtani, Masato; Tani, Naoki; Yoshimaru, Hiroshi

2008-11-01

Polymorphic microsatellite markers were developed for Hibiscus glaber, an endemic tree of the Bonin Islands. Eighty-seven of the 208 sequences from an enriched library were unique and containing microsatellites. Ten loci were proved to be highly polymorphic among 78 individuals from the Nishi-jima Island. Total exclusionary powers for the first and the second parents were 99.989% and 99.999%, respectively. Nine loci also amplified single fragment from genomic DNA of H. tiliaceus, a related and widespread congener. Our markers can be reliably used for the estimation of current gene flow within/among populations of the two woody Hibiscus species. © 2008 The Authors. Journal compilation © 2008 Blackwell Publishing Ltd.

Recovery of Physiological Traits in Saplings of Invasive Bischofia Tree Compared with Three Species Native to the Bonin Islands under Successive Drought and Irrigation Cycles.

Science.gov (United States)

Yazaki, Kenichi; Kuroda, Katsushi; Nakano, Takashi; Kitao, Mitsutoshi; Tobita, Hiroyuki; Ogasa, Mayumi Y; Ishida, Atsushi

2015-01-01

Partial leaf shedding induced by hydraulic failure under prolonged drought can prevent excess water consumption, resulting in delayed recovery of carbon productivity following rainfall. To understand the manner of water use of invasive species in oceanic island forests under a fluctuating water regime, leaf shedding, multiple physiological traits, and the progress of embolism in the stem xylem under repeated drought-irrigation cycles were examined in the potted saplings of an invasive species, Bischofia javanica Blume, and three endemic native species, Schima mertensiana (Sieb. Et Zucc,) Koitz., Hibiscus glaber Matsum, and Distylium lepidotum Nakai, from the Bonin Islands, Japan. The progress of xylem embolism was observed by cryo-scanning electron microscopy. The samples exhibited different processes of water saving and drought tolerance based on the different combinations of partial leaf shedding involved in embolized conduits following repeated de-rehydration. Predawn leaf water potential largely decreased with each successive drought-irrigation cycle for all tree species, except for B. javanica. B. javanica shed leaves conspicuously under drought and showed responsive stomatal conductance to VPD, which contributed to recover leaf gas exchange in the remaining leaves, following a restored water supply. In contrast, native tree species did not completely recover photosynthetic rates during the repeated drought-irrigation cycles. H. glaber and D. lepidotum preserved water in vessels and adjusted leaf osmotic rates but did not actively shed leaves. S. mertensiana exhibited partial leaf shedding during the first cycle with an osmotic adjustment, but they showed less responsive stomatal conductance to VPD. Our data indicate that invasive B. javanica saplings can effectively use water supplied suddenly under drought conditions. We predict that fluctuating precipitation in the future may change tree distributions even in mesic or moist sites in the Bonin Islands.

Recovery of Physiological Traits in Saplings of Invasive Bischofia Tree Compared with Three Species Native to the Bonin Islands under Successive Drought and Irrigation Cycles.

Directory of Open Access Journals (Sweden)

Kenichi Yazaki

Full Text Available Partial leaf shedding induced by hydraulic failure under prolonged drought can prevent excess water consumption, resulting in delayed recovery of carbon productivity following rainfall. To understand the manner of water use of invasive species in oceanic island forests under a fluctuating water regime, leaf shedding, multiple physiological traits, and the progress of embolism in the stem xylem under repeated drought-irrigation cycles were examined in the potted saplings of an invasive species, Bischofia javanica Blume, and three endemic native species, Schima mertensiana (Sieb. Et Zucc, Koitz., Hibiscus glaber Matsum, and Distylium lepidotum Nakai, from the Bonin Islands, Japan. The progress of xylem embolism was observed by cryo-scanning electron microscopy. The samples exhibited different processes of water saving and drought tolerance based on the different combinations of partial leaf shedding involved in embolized conduits following repeated de-rehydration. Predawn leaf water potential largely decreased with each successive drought-irrigation cycle for all tree species, except for B. javanica. B. javanica shed leaves conspicuously under drought and showed responsive stomatal conductance to VPD, which contributed to recover leaf gas exchange in the remaining leaves, following a restored water supply. In contrast, native tree species did not completely recover photosynthetic rates during the repeated drought-irrigation cycles. H. glaber and D. lepidotum preserved water in vessels and adjusted leaf osmotic rates but did not actively shed leaves. S. mertensiana exhibited partial leaf shedding during the first cycle with an osmotic adjustment, but they showed less responsive stomatal conductance to VPD. Our data indicate that invasive B. javanica saplings can effectively use water supplied suddenly under drought conditions. We predict that fluctuating precipitation in the future may change tree distributions even in mesic or moist sites in the

Raccoon Use of Den Trees and Plant Associations in Western Mesophytic Forests: Tree Attributes and Availability or Landscape Heterogeneity?

Science.gov (United States)

Winston P. Smith; Keith M. Endres

2012-01-01

We monitored 15 radio-collared raccoons (Procyon lotor) on Davies Island in March 1987 - May 1988 to determine the extent to which individual tree attributes or spatial configuration of plant associations (habitat types) across the land-scape influenced den use. Of 1091 verified den sites, 428 were in tree cavities. Raccoon occurrence among 4 cover...

Island forming processes in the Okavango Delta, Botswana

Science.gov (United States)

McCarthy, T. S.; Humphries, M. S.; Mahomed, I.; Le Roux, P.; Verhagen, B. Th.

2012-12-01

The Okavango Delta in Botswana is a large (40,000 km2) alluvial fan that is characterised by the presence of numerous tree-covered islands. Thought to originate from the mound-building activities of termites or through fluvial processes associated with development of scroll bars and inverted channels, islands have been shown to play an important role in the structure and functioning of the Delta through the creation of habitat diversity, focusing of nutrients, and disposal of toxic salts. This study investigates the processes responsible for the maintenance and growth of two such islands in the seasonal swamps. Transpiration by vegetation is shown to result in substantial increases in groundwater salinity beneath the islands, contributing to their growth through chemical precipitation. Detailed chemical analyses revealed that the precipitation of magnesian calcite and silica within the island soils contributes 30-40% of the total island volume. Isotopic analyses of carbonate samples show that vegetation plays an important role in providing carbon for carbonate precipitation. Variations in δ13C carbonate values appear to reflect the relative proportion of C3 to C4 plants on the island, with C4 species becoming more dominant toward island centres in response to increases in groundwater salinity. The study suggests that continued island growth is also related to the deposition of aerosols and the accumulation of dust preferentially on islands and possibly to ongoing termite activity. Tall trees that characterise the island margins trap dust carried from the floodplains, resulting particularly in the lateral growth of islands. Islands in the Okavango are considered to be the product of long-term aggradation processes, with the two islands studied estimated to be in the order of tens of thousands of years old.

Species collapse via hybridization in Darwin's tree finches.

Science.gov (United States)

Kleindorfer, Sonia; O'Connor, Jody A; Dudaniec, Rachael Y; Myers, Steven A; Robertson, Jeremy; Sulloway, Frank J

2014-03-01

Species hybridization can lead to fitness costs, species collapse, and novel evolutionary trajectories in changing environments. Hybridization is predicted to be more common when environmental conditions change rapidly. Here, we test patterns of hybridization in three sympatric tree finch species (small tree finch Camarhynchus parvulus, medium tree finch Camarhynchus pauper, and large tree finch: Camarhynchus psittacula) that are currently recognized on Floreana Island, Galápagos Archipelago. Genetic analysis of microsatellite data from contemporary samples showed two genetic populations and one hybrid cluster in both 2005 and 2010; hybrid individuals were derived from genetic population 1 (small morph) and genetic population 2 (large morph). Females of the large and rare species were more likely to pair with males of the small common species. Finch populations differed in morphology in 1852-1906 compared with 2005/2010. An unsupervised clustering method showed (a) support for three morphological clusters in the historical tree finch sample (1852-1906), which is consistent with current species recognition; (b) support for two or three morphological clusters in 2005 with some (19%) hybridization; and (c) support for just two morphological clusters in 2010 with frequent (41%) hybridization. We discuss these findings in relation to species demarcations of Camarhynchus tree finches on Floreana Island.

Identification of seventeen microsatellite loci for conservation genetic studies of the endemic wrasse Coris bulbifrons

KAUST Repository

Van Der Meer, Martin H.

2012-11-08

Coral reefs around the world are in decline, in part due to various anthropogenic factors, including fishing pressure. Coris bulbifrons is a large wrasse endemic to only four oceanic locations off Australia\\'s east coast: Middleton Reef, Elizabeth Reef, Lord Howe Island and Norfolk Island. The species is listed as vulnerable by the IUCN due to the potential threat of overfishing. Although these remote locations, some within Marine protected Areas, experience limited fishing pressure, populations may quickly decline with minimal fishing effort as seen in the overfishing of other large wrasses. We developed primers for 17 microsatellite loci to examine gene flow, population genetic structure, and genetic diversity within and among these four locations. Observed heterozygosities ranged 0. 126-0. 752 in 37 individuals from Lord Howe Island indicating that these loci will be useful in C. bulbifrons population genetic studies. © 2012 Springer Science+Business Media Dordrecht.

Increases in soil water content after the mortality of non-native trees in oceanic island forest ecosystems are due to reduced water loss during dry periods.

Science.gov (United States)

Hata, Kenji; Kawakami, Kazuto; Kachi, Naoki

2016-03-01

The control of dominant, non-native trees can alter the water balance of soils in forest ecosystems via hydrological processes, which results in changes in soil water environments. To test this idea, we evaluated the effects of the mortality of an invasive tree, Casuarina equisetifolia Forst., on the water content of surface soils on the Ogasawara Islands, subtropical islands in the northwestern Pacific Ocean, using a manipulative herbicide experiment. Temporal changes in volumetric water content of surface soils at 6 cm depth at sites where all trees of C. equisetifolia were killed by herbicide were compared with those of adjacent control sites before and after their mortality with consideration of the amount of precipitation. In addition, the rate of decrease in the soil water content during dry periods and the rate of increase in the soil water content during rainfall periods were compared between herbicide and control sites. Soil water content at sites treated with herbicide was significantly higher after treatment than soil water content at control sites during the same period. Differences between initial and minimum values of soil water content at the herbicide sites during the drying events were significantly lower than the corresponding differences in the control quadrats. During rainfall periods, both initial and maximum values of soil water contents in the herbicided quadrats were higher, and differences between the maximum and initial values did not differ between the herbicided and control quadrats. Our results indicated that the mortality of non-native trees from forest ecosystems increased water content of surface soils, due primarily to a slower rate of decrease in soil water content during dry periods. Copyright © 2015 Elsevier B.V. All rights reserved.

Adaptability of some legume trees on quartz tailings of a former tin mining area in Bangka Island, Indonesia

Directory of Open Access Journals (Sweden)

B H Narendra

2016-10-01

Full Text Available Tin mining activities in Bangka Island, besides their important role in contributing to state revenues, also caused damage to the environment, among others in the form of quartz tailings overlay. To rehabilitate this land, in addition to the necessary efforts to improve soil conditions, success is also determined by the selection of appropriate plant species. This study was aimed to determine the adaptability of some legume trees grown on the quartz tailings in land rehabilitation trials in the post tin mining areas of Bangka Island. The legume trees tested were Calliandra calothyrsus Meisn., Caesalpinia sappan L., Enterolobium cyclocarpum (Jacq. Griseb., Gliricidia sepium (Jacq. Walp., Delonix regia ( Hook. Raf., and Cassia siamea Lamk. Treatments of growing media applied  in  the field were medium I (a mixture of 20% organic material, 20% top soil, 1% NPK fertilizer, 5% calcium, and 54% quartz tailings, media II (a mixture of 25%organic material, 25%top soil, 2% NPK fertilizer, 6% calcium, 42% quartz tailings, and media III (a mixture of 30% organic material, 30% top soil, 3% NPK fertilizer, 7% calcium, and 30% quartz tailings. The observation was done by measuring the height and diameter of the stem of the plants, as well as the viability of one year after planting. Analysis of the results of measurements of stem height and diameter showed their diversity. Enterolobium cyclocarpum had the largest dimensions, while the lowest was Caesalpinia sappan. At the age of one year in the field, Gliricida sepium and Enterolobium cyclocarpum showed the average ability of the high life of up to 100%, whereas Calliandra calothyrsus was totally death. In general, the types of legumes selected in this trial showed good adaptability, except for of Calliandra calothyrsus

The Howe Sound current metering program volumes I, II, and III data reports from A. P. KNIGHT in the Coastal Waters of British Columbia from 1971-11-01 to 1974-02-01 (NCEI Accession 7700091)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Current meter data and some temperature and salinity data were collected as part of the Howe Sound Current Metering Program Data during November 16, 1971 - February...

Tree Biomass Allocation and Its Model Additivity for Casuarina equisetifolia in a Tropical Forest of Hainan Island, China

Science.gov (United States)

Xue, Yang; Yang, Zhongyang; Wang, Xiaoyan; Lin, Zhipan; Li, Dunxi; Su, Shaofeng

2016-01-01

Casuarina equisetifolia is commonly planted and used in the construction of coastal shelterbelt protection in Hainan Island. Thus, it is critical to accurately estimate the tree biomass of Casuarina equisetifolia L. for forest managers to evaluate the biomass stock in Hainan. The data for this work consisted of 72 trees, which were divided into three age groups: young forest, middle-aged forest, and mature forest. The proportion of biomass from the trunk significantly increased with age (Pbiomass of the branch and leaf decreased, and the biomass of the root did not change. To test whether the crown radius (CR) can improve biomass estimates of C. equisetifolia, we introduced CR into the biomass models. Here, six models were used to estimate the biomass of each component, including the trunk, the branch, the leaf, and the root. In each group, we selected one model among these six models for each component. The results showed that including the CR greatly improved the model performance and reduced the error, especially for the young and mature forests. In addition, to ensure biomass additivity, the selected equation for each component was fitted as a system of equations using seemingly unrelated regression (SUR). The SUR method not only gave efficient and accurate estimates but also achieved the logical additivity. The results in this study provide a robust estimation of tree biomass components and total biomass over three groups of C. equisetifolia. PMID:27002822

Tree Biomass Allocation and Its Model Additivity for Casuarina equisetifolia in a Tropical Forest of Hainan Island, China.

Science.gov (United States)

Xue, Yang; Yang, Zhongyang; Wang, Xiaoyan; Lin, Zhipan; Li, Dunxi; Su, Shaofeng

2016-01-01

Casuarina equisetifolia is commonly planted and used in the construction of coastal shelterbelt protection in Hainan Island. Thus, it is critical to accurately estimate the tree biomass of Casuarina equisetifolia L. for forest managers to evaluate the biomass stock in Hainan. The data for this work consisted of 72 trees, which were divided into three age groups: young forest, middle-aged forest, and mature forest. The proportion of biomass from the trunk significantly increased with age (Pbiomass of the branch and leaf decreased, and the biomass of the root did not change. To test whether the crown radius (CR) can improve biomass estimates of C. equisetifolia, we introduced CR into the biomass models. Here, six models were used to estimate the biomass of each component, including the trunk, the branch, the leaf, and the root. In each group, we selected one model among these six models for each component. The results showed that including the CR greatly improved the model performance and reduced the error, especially for the young and mature forests. In addition, to ensure biomass additivity, the selected equation for each component was fitted as a system of equations using seemingly unrelated regression (SUR). The SUR method not only gave efficient and accurate estimates but also achieved the logical additivity. The results in this study provide a robust estimation of tree biomass components and total biomass over three groups of C. equisetifolia.

Tree Diversity and Structure of Andaman Giant Evergreen Forests, India

Directory of Open Access Journals (Sweden)

M. Rajkumar

2008-12-01

Full Text Available We investigated tree diversity in ‘giant evergreen forest’ of Andaman and Nicobar Islands, which falls within the Indo-Burma hot spot of biodiversity in the world. A one hectare square plot was established in sites Kalapahad (KP and Macarthy Valley (MV of Middle Andamans, in which all trees ≥ 30 cm girth at breast height (gbh were enumerated. Tree diversity totaled 105 species that belonged to 63 genera and 49 families. Site MV harboured ~10% greater species richness than KP. Species diversity indices did not vary much between the two sites. In the two sites, there were 1311 individuals of trees (579 ha-1 in KP and 732 in MV. The stand basal area was nearly equal in both the sites (KP- 45.59 m2 ha-1; MV- 47.93 m2 ha-1. Thirteen tree species (12.38% were strict endemics to Andamans. Ten species recorded are rare to the flora of these islands. The two sites are distinctly dominated by two different plant families; Dipterocarpaceae in KP and Myristicaceae in MV. Most of the species were common to central and lower region of Myanmar and Indian mainland. The forest stand structure exhibited a typical reverse-J shape, but site MV had double the density of stems in the lower tree size class than that of KP. The voluminous dipterocarps contributed more to the total above-ground live biomass. The need to preserve these species- and endemics- rich, fragile island forests, prioritized for biodiversity conservation, is emphasized.

Palm tree syrup: nutritional composition of a natural edulcorant.

Science.gov (United States)

Luis, G; Rubio, C; Gutiérrez, A J; Hernández, C; González-Weller, D; Revert, C; Castilla, A; Abreu, P; Hardisson, A

2012-01-01

Palm syrup is a typical product from the Canary Islands, traditionally produced from the sap of the tropical palm tree Phoenix canariensis. Its high caloric content has led to its increasing use as a health food supplement for athletes, children and elderly. Furthermore, demand for this natural syrup is continuously increasing due also to its medicinal uses in homeopathic medicine. Palm Tree syrup samples prepared with palm sap from primary producers in La Gomera island (Canary Islands, Spain) were analyzed for their nutritional composition (moisture, ash, sugars, fat, vitamins and minerals). 35 syrup samples from five different producing regions in La Gomera island were analyzed. High-performance liquid chromatography (HPLC) was used to determine sugars and vitamins and Flame Atomic Absorption Spectrophotometry (FAAS) was used to analyze the minerals. Major carbohydrates were sucrose (37.8%), glucose (9.50%) and fructose (4.80%), respectively. The presence of arabinose could not be confirmed. Niacin was the water-soluble vitamin with the highest concentration with an average content of 0.003%. Fat content was found to be under 0.20%. Potassium was the mineral with highest contents (0.45%). Results suggest that palm tree syrup can play an important role as a sugar and mineral source in human nutrition, suggesting that future applications for this product could be developed.

Botanical Survey in Moyo Island, West Nusa Tenggara, Indonesia: Inventory of Flora Collection at Forest

Directory of Open Access Journals (Sweden)

Trimanto Trimanto

2017-05-01

Full Text Available Nusa Tenggara consists of some small islands, one of them is Moyo Island. The diversity of plant species in this island is not really known for certain. This research was determined to observe the diversity of plant spe-cies in Moyo Island forest. The research was conducted in April 2013 by using floristic analysis method. The characteristic of Moyo Island forest is lowland evergreen rain forest. The results showed there were 60 tree species recorded in Moyo Island forest. There were many fruiting trees and seedling from the trees which show healthy growth, indicated that the plant regeneration in this forest is went well. The diversity of Pteri-dophytes and orchids were not high. Epiphytic fern which often found in the forest were Drynaria quersifolia and Platycerium bifurcatum and terrestrial orchid that dominated in the forest was Nervilia aragoana. Tuber plant was often found in this forest and grew prolifically were Tacca, Dioscorea and Amorphophallus. In coastal area lived a population of Pandanus tectorius. There were three new record plants found. The first was epiphytic orchid: Pteroceras javanica, the second was the epiphytic plant: Hoya verticillata and wild tuber plant: Tacca leontopetaloides.

Olive tree-ring problematic dating: a comparative analysis on Santorini (Greece.

Directory of Open Access Journals (Sweden)

Paolo Cherubini

Full Text Available Olive trees are a classic component of Mediterranean environments and some of them are known historically to be very old. In order to evaluate the possibility to use olive tree-rings for dendrochronology, we examined by various methods the reliability of olive tree-rings identification. Dendrochronological analyses of olive trees growing on the Aegean island Santorini (Greece show that the determination of the number of tree-rings is impossible because of intra-annual wood density fluctuations, variability in tree-ring boundary structure, and restriction of its cambial activity to shifting sectors of the circumference, causing the tree-ring sequences along radii of the same cross section to differ.

Olive tree-ring problematic dating: a comparative analysis on Santorini (Greece).

Science.gov (United States)

Cherubini, Paolo; Humbel, Turi; Beeckman, Hans; Gärtner, Holger; Mannes, David; Pearson, Charlotte; Schoch, Werner; Tognetti, Roberto; Lev-Yadun, Simcha

2013-01-01

Olive trees are a classic component of Mediterranean environments and some of them are known historically to be very old. In order to evaluate the possibility to use olive tree-rings for dendrochronology, we examined by various methods the reliability of olive tree-rings identification. Dendrochronological analyses of olive trees growing on the Aegean island Santorini (Greece) show that the determination of the number of tree-rings is impossible because of intra-annual wood density fluctuations, variability in tree-ring boundary structure, and restriction of its cambial activity to shifting sectors of the circumference, causing the tree-ring sequences along radii of the same cross section to differ.

Hide and vanish: data sets where the most parsimonious tree is known but hard to find, and their implications for tree search methods.

Science.gov (United States)

Goloboff, Pablo A

2014-10-01

Three different types of data sets, for which the uniquely most parsimonious tree can be known exactly but is hard to find with heuristic tree search methods, are studied. Tree searches are complicated more by the shape of the tree landscape (i.e. the distribution of homoplasy on different trees) than by the sheer abundance of homoplasy or character conflict. Data sets of Type 1 are those constructed by Radel et al. (2013). Data sets of Type 2 present a very rugged landscape, with narrow peaks and valleys, but relatively low amounts of homoplasy. For such a tree landscape, subjecting the trees to TBR and saving suboptimal trees produces much better results when the sequence of clipping for the tree branches is randomized instead of fixed. An unexpected finding for data sets of Types 1 and 2 is that starting a search from a random tree instead of a random addition sequence Wagner tree may increase the probability that the search finds the most parsimonious tree; a small artificial example where these probabilities can be calculated exactly is presented. Data sets of Type 3, the most difficult data sets studied here, comprise only congruent characters, and a single island with only one most parsimonious tree. Even if there is a single island, missing entries create a very flat landscape which is difficult to traverse with tree search algorithms because the number of equally parsimonious trees that need to be saved and swapped to effectively move around the plateaus is too large. Minor modifications of the parameters of tree drifting, ratchet, and sectorial searches allow travelling around these plateaus much more efficiently than saving and swapping large numbers of equally parsimonious trees with TBR. For these data sets, two new related criteria for selecting taxon addition sequences in Wagner trees (the "selected" and "informative" addition sequences) produce much better results than the standard random or closest addition sequences. These new methods for Wagner

Soil CO2 Dynamics in a Tree Island Soil of the Pantanal: The Role of Soil Water Potential

Science.gov (United States)

Johnson, Mark S.; Couto, Eduardo Guimarães; Pinto Jr, Osvaldo B.; Milesi, Juliana; Santos Amorim, Ricardo S.; Messias, Indira A. M.; Biudes, Marcelo Sacardi

2013-01-01

The Pantanal is a biodiversity hotspot comprised of a mosaic of landforms that differ in vegetative assemblages and flooding dynamics. Tree islands provide refuge for terrestrial fauna during the flooding period and are particularly important to the regional ecosystem structure. Little soil CO2 research has been conducted in this region. We evaluated soil CO2 dynamics in relation to primary controlling environmental parameters (soil temperature and soil water). Soil respiration was computed using the gradient method using in situ infrared gas analyzers to directly measure CO2 concentration within the soil profile. Due to the cost of the sensors and associated equipment, this study was unreplicated. Rather, we focus on the temporal relationships between soil CO2 efflux and related environmental parameters. Soil CO2 efflux during the study averaged 3.53 µmol CO2 m−2 s−1, and was equivalent to an annual soil respiration of 1220 g C m−2 y−1. This efflux value, integrated over a year, is comparable to soil C stocks for 0–20 cm. Soil water potential was the measured parameter most strongly associated with soil CO2 concentrations, with high CO2 values observed only once soil water potential at the 10 cm depth approached zero. This relationship was exhibited across a spectrum of timescales and was found to be significant at a daily timescale across all seasons using conditional nonparametric spectral Granger causality analysis. Hydrology plays a significant role in controlling CO2 efflux from the tree island soil, with soil CO2 dynamics differing by wetting mechanism. During the wet-up period, direct precipitation infiltrates soil from above and results in pulses of CO2 efflux from soil. The annual flood arrives later, and saturates soil from below. While CO2 concentrations in soil grew very high under both wetting mechanisms, the change in soil CO2 efflux was only significant when soils were wet from above. PMID:23762259

The Galápagos Islands: relatively untouched, but increasingly endangered

Directory of Open Access Journals (Sweden)

Markus P. Tellkamp

2017-05-01

Full Text Available Hardly any place on the planet evokes a sense of mystique and wonder like the Galápagos Islands (Figure 1. They are the cradle of evolutionary thought. They also are home to an unusual menagerie of animals, such as prehistoric-looking iguanas that feed on algae, giant tortoises, the only species of penguin to live on the equator, a flightless cormorant, a group of unique an famous finches, furtive and shy rice rats, sea lions and fur seals. Visitors have to be careful not to step on the oxymoronically extremely tame wildlife. Endemic plants, such as tree-like cacti, Scalesia trees and shrubs (relatives of sunflowers and daisies, and highland Miconia shrubs cover different island life zones. Around the world, people may not have heard much of Ecuador, the small South American country that proudly calls the islands its own, but they likely have heard of the famed Galapagos. Apart from the extraordinary sensation of experiencing wildlife up close, however, what makes these islands so special?

Estimating soil turnover rate from tree uprooting during hurricanes in Puerto Rico

Science.gov (United States)

Melanie T. Lenart; D.A. Falk; F.N. Scatena; W.R. Osterkamp

2010-01-01

Soil turnover by tree uprooting in primary and secondary forests on the island of Puerto Rico was measured in 42 study plots in the months immediately after the passage of a Category 3 hurricane. Trunk basal area explained 61% of the variability of mound volume and 53% of the variability of mound area. The proportion of uprooted trees, the number of uprooted trees, or...

Green tree frog (Hyla cinerea) and ground squirrel (Xerospermophilus spilosoma) mortality attributed to inland brevetoxin transportation at Padre Island National Seashore, Texas, 2015

Science.gov (United States)

Buttke, Danielle E.; Walker, Alicia; Huang, I-Shuo; Flewelling, Leanne; Lankton, Julia S.; Ballmann, Anne E.; Clapp, Travis; Lindsay, James; Zimba, Paul V.

2018-01-01

On 16 September 2015, a red tide (Karenia brevis) bloom impacted coastal areas of Padre Island National Seashore Park. Two days later and about 0.9 km inland, 30–40 adult green tree frogs (Hyla cinerea) were found dead after displaying tremors, weakness, labored breathing, and other signs of neurologic impairment. A rainstorm, accompanied by high winds, rough surf, and high tides, which could have aerosolized brevetoxin, occurred on the morning of the mortality event. Frog carcasses were healthy but contained significant brevetoxin in tissues. Tissue brevetoxin was also found in two dead or dying spotted ground squirrels (Xerospermophilus spilosoma) and a coyote (Canis latrans). Rainwater collected from the location of the mortality event contained brevetoxin. Mortality of green tree frog and ground squirrel mortality has not been previously attributed to brevetoxin exposure and such mortality suggested that inland toxin transport, possibly through aerosols, rainfall, or insects, may have important implications for coastal species.

Fungal trunk pathogens associated with wood decay of almond trees on Mallorca (Spain)

NARCIS (Netherlands)

Gramaje, D.; Agustí-Brisach, C.; Pérez-Sierra, A.; Moralejo, E.; Olmo, D.; Mostert, L.; Damm, U.; Armengol, J.

2012-01-01

Severe decline of almond trees has recently been observed in several orchards on the island of Mallorca (Balearic Islands, western Mediterranean Sea). However, the identity of the causal agents has not yet been investigated. Between August 2008 and June 2010, wood samples from branches of almond

Impacts of the Brown Tree Snake: Patterns of Decline and Species Persistence in Guam's Avifauna

Science.gov (United States)

Wiles, G.J.; Bart, J.; Beck, R.E.; Aguon, C.F.

2003-01-01

Predation by brown tree snakes (Boiga irregularis ) devastated the avifauna of Guam in the Mariana Islands during the last half of the twentieth century, causing the extirpation or serious reduction of most of the island's 25 resident bird species. Past studies have provided qualitative descriptions of the decline of native forest birds but have not considered all species or presented quantitative analyses. We analyzed two sets of survey data gathered in northern Guam between 1976 and 1998 and reviewed unpublished sources to provide a comprehensive account of the impact of brown tree snakes on the island's birds. Our results indicate that 22 species, including 17 of 18 native species, were severely affected by snakes. Twelve species were likely extirpated as breeding residents on the main island, 8 others experienced declines of ≥90% throughout the island or at least in the north, and 2 were kept at reduced population levels during all or much of the study. Declines of ≥90% occurred rapidly, averaging just 8.9 years along three roadside survey routes combined and 1.6 years at a 100-ha forested study site. Declines in northern Guam were also relatively synchronous and occurred from about 1976 to 1986 for most species. The most important factor predisposing a species to coexistence with brown tree snakes was its ability to nest and roost at locations where snakes were uncommon. Large clutch size and large body size were also related to longer persistence times, although large body size appeared to delay, but not prevent, extirpation. Our results draw attention to the enormous detrimental impact that brown tree snakes are likely to have upon invading new areas. Increased containment efforts on Guam are needed to prevent further colonizations, but a variety of additional management efforts would also benefit the island's remaining bird populations.

Distribution and infestation levels of Crypticerya multicicatrices Kondo and Unruh (Hemiptera: Monophlebidae on San Andrés island

Directory of Open Access Journals (Sweden)

Takumasa Kondo Kondo

2014-01-01

Full Text Available The fluted scale Crypticerya multicicatrices (Hemiptera: Monophlebidae is an invasive insect that became a major pest on the island of San Andrés. To generate control strategies for this insect, its distribution and infestation levels on palm species, fruit trees, leguminous trees and other plant species were determined during January 14–18, 2013. A total of 96 points were sampled in order to determine the distribution of the insect on the island. During the study, the fluted scale was found distributed throughout the island of San Andrés, including Haynes Cay and Johnny Cay. The palms were the plants with the highest levels of infestation, 70.8% had some degree of infestation (37.5% high infestation levels; followed by fruit trees which had 65.6% with some degree of infestation (30.2% high infestation levels; followed by leguminous trees which had 59.6% with some degree of infestation (13.5% high infestation levels and finally “other hosts” which had 51.1% with some level of infestation (11.5% high infestation levels. This study is the first detailed mapping of C. multicicatrices on the island of San Andrés which will become the basis for future work on the population dynamics of the fluted scale and its distribution on the island.

The History of Tree and Shrub Taxa on Bol'shoy Lyakhovsky Island (New Siberian Archipelago since the Last Interglacial Uncovered by Sedimentary Ancient DNA and Pollen Data

Directory of Open Access Journals (Sweden)

Heike H. Zimmermann

2017-10-01

Full Text Available Ecosystem boundaries, such as the Arctic-Boreal treeline, are strongly coupled with climate and were spatially highly dynamic during past glacial-interglacial cycles. Only a few studies cover vegetation changes since the last interglacial, as most of the former landscapes are inundated and difficult to access. Using pollen analysis and sedimentary ancient DNA (sedaDNA metabarcoding, we reveal vegetation changes on Bol’shoy Lyakhovsky Island since the last interglacial from permafrost sediments. Last interglacial samples depict high levels of floral diversity with the presence of trees (Larix, Picea, Populus and shrubs (Alnus, Betula, Ribes, Cornus, Saliceae on the currently treeless island. After the Last Glacial Maximum, Larix re-colonised the island but disappeared along with most shrub taxa. This was probably caused by Holocene sea-level rise, which led to increased oceanic conditions on the island. Additionally, we applied two newly developed larch-specific chloroplast markers to evaluate their potential for tracking past population dynamics from environmental samples. The novel markers were successfully re-sequenced and exhibited two variants of each marker in last interglacial samples. SedaDNA can track vegetation changes as well as genetic changes across geographic space through time and can improve our understanding of past processes that shape modern patterns.

Islamic Education Values in Tinasuka’s Customary on Wawonii Tribe of Konawe Islands

Science.gov (United States)

Hadisi, La; Alpin, Muhammad

2018-05-01

This study aims to know and understand the values of Islamic religious education in Tinasuka custom of Wawonii community in Konawe Islands District. This research uses qualitative descriptive research. Data was obtained in the form of opinions, views or another expression of thoughts through interviews, then analyzed by compiling data. To determine the validity of data obtained, this study used triangulation of sources and data. The results show that: “Tinasuka in Wawonii Tribe of Konawe Islands Regency has a close relationship with the values of Islamic education”. Tinasuka comes from wawonii language. It means dowry which way of fulfilment and its kind is different from another area, the dowry type is coconut tree, and the fulfilment depends on social strata of the woman. Historically, according to the Wawonii community, the philosophy of Tinasuka customary originated from the meaning of wawonii island and the facts about the source of the wawonii tribe’s life dominated by coconut trees compared to other types of agriculture. So the value of Islamic education in Tinasuka custom is to prioritize tolerance and humanism in the fulfilment of dowries, are required to work hard especially in planting coconut trees, and cooperation. After the end of the dominant system, the Tinasuka custom continues to grow and undergo some adjustments coupled with the reduced land to grow coconut trees, so that the Tinasuka in the form of coconut trees can be converted in money.

Indigenous Fallow Management on Yap Island

Science.gov (United States)

M.V.C. Falanruw; Francis Ruegorong

2002-01-01

On Yap Island, indigenous management of the fallow in shifting agriculture has resulted in the development of site-stable taro patch and tree garden agroforestry systems. These systems are relatively sustainable and supportive of household economies , with some surplus for local market sales. however, a broad range of crops whose harvest is complementary to those...

Optimal tree design for daylighting in residential buildings

Energy Technology Data Exchange (ETDEWEB)

Hongbing, Wang [College of Landscape Architecture, Beijing Forestry University, 35, East Qinghua Rd., Beijing (China); Shanghai Botanical Garden, 1111, Longwu Rd., Shanghai (China); Jun, Qin; Yonghong, Hu [Shanghai Botanical Garden, 1111, Longwu Rd., Shanghai (China); Li, Dong [College of Landscape Architecture, Beijing Forestry University, 35, East Qinghua Rd., Beijing (China)

2010-12-15

Urban reforestation is advocated as an efficient countermeasure to the intensification of urban heat islands. The greening and beautification of residential quarters is one of the main concerns of residents, while lighting and ventilation are two main energy-consuming building services. Hence, the tree layout in green space between buildings is important, and it is necessary to determine the relationships between trees and buildings. This study takes Shanghai as a case study to optimize tree design between residential buildings and meet good daylighting requirements. Models were made using software such as AutoCAD and SketchUp. The relationships between maximum tree height and building separation were determined. For the same building layout, there were different tree height limits according to crown shape; the order of decreasing height limits was cylindrical, conical, spherical, and inverted conical crowns. Three cases having different green space between building layouts were studied. Their maximum tree heights differed. Overall, our model helps us realize good daylighting of a building environment. The formula allows us to determine which trees to plant between buildings in that we can predict the effects of future tree growth on building daylighting. (author)

The Solomon Islands Tsunami of 6 February 2013 in the Santa Cruz Islands: Field Survey and Modeling

Science.gov (United States)

Fritz, Hermann M.; Papantoniou, Antonios; Biukoto, Litea; Albert, Gilly; Wei, Yong

2014-05-01

On February 6, 2013 at 01:12:27 UTC (local time: UTC+11), a magnitude Mw 8.0 earthquake occurred 70 km to the west of Ndendo Island (Santa Cruz Island) in the Solomon Islands. The under-thrusting earthquake near a 90° bend, where the Australian plate subducts beneath the Pacific plate generated a locally focused tsunami in the Coral Sea and the South Pacific Ocean. The tsunami claimed the lives of 10 people and injured 15, destroyed 588 houses and partially damaged 478 houses, affecting 4,509 people in 1,066 households corresponding to an estimated 37% of the population of Santa Cruz Island. A multi-disciplinary international tsunami survey team (ITST) was deployed within days of the event to document flow depths, runup heights, inundation distances, sediment and coral boulder depositions, land level changes, damage patterns at various scales, performance of the man-made infrastructure and impact on the natural environment. The 19 to 23 February 2013 ITST covered 30 locations on 4 Islands: Ndendo (Santa Cruz), Tomotu Noi (Lord Howe), Nea Tomotu (Trevanion, Malo) and Tinakula. The reconnaissance completely circling Ndendo and Tinakula logged 240 km by small boat and additionally covered 20 km of Ndendo's hard hit western coastline by vehicle. The collected survey data includes more than 80 tsunami runup and flow depth measurements. The tsunami impact peaked at Manoputi on Ndendo's densely populated west coast with maximum tsunami height exceeding 11 m and local flow depths above ground exceeding 7 m. A fast tide-like positive amplitude of 1 m was recorded at Lata wharf inside Graciosa Bay on Ndendo Island and misleadingly reported in the media as representative tsunami height. The stark contrast between the field observations on exposed coastlines and the Lata tide gauge recording highlights the importance of rapid tsunami reconnaissance surveys. Inundation distance and damage more than 500 m inland were recorded at Lata airport on Ndendo Island. Landslides were

Mapping the Distribution of Sand Live Oak (Quercus geminata) and Determining Growth Responses to Hurricane Katrina (2005) on Cat Island, Mississippi

Science.gov (United States)

Funderburk, W.; Carter, G. A.; Harley, G. L.

2013-12-01

William R. Funderburk, Gregory A. Carter, Grant Harley Gulf Coast Geospatial Center, University of Southern Mississippi Department of Geography and Geology Stennis Space Center, MS 39529 U.S.A. william.funderburk@usm.edu The Mississippi-Alabama barrier islands serve to buffer mainland coastal areas from the impacts of hurricanes and other extreme weather events. On August 29, 2005, they were impacted heavily by the wind, waves, and storm surges of Hurricane Katrina. The purpose of this study is to determine the growth responses of Quercus geminata, a dominant tree species on Cat Island, MS, in relation to the impact of Hurricane Katrina. Remotely sensed data was utilized in conjunction with ground data to assess growth response post Hurricane Katrina. The main objectives of this study were: 1) determine growth response of Q. geminata through tree ring analysis; 2) understand how Q. geminata adapted to intense weather and climatic phenomena on Cat Island. The hypotheses tested were: 1) growth rates of Q. geminata on Cat Island were decreased by the impact of Hurricane Katrina 2) trees at higher elevations survived or recovered while trees at lower elevations did not recover or died. Decadal scale stability is required for forest stand development on siliciclastic barrier islands. Thus, monitoring the distribution of forest climax community species is key to understanding siliciclastic, subsiding, barrier island geomorphic processes and their relationships to successional patterns and growth rates. Preliminary results indicate that Q. geminata produces a faint growth ring, survive for at least two to three hundred years and is well-adapted to frequent salt water flooding. Cat Island: False color Image

Monitoring Coral Health to Determine Coral Bleaching Response at High Latitude Eastern Australian Reefs: An Applied Model for A Changing Climate

OpenAIRE

Dalton, Steven J.; Carroll, Andrew G.

2011-01-01

Limited information is available on the bleaching susceptibility of coral species that dominate high latitude reefs along the eastern seaboard of Australia. The main aims of this study were to: (i) monitor coral health and spatial patterns of coral bleaching response at the Solitary Islands Marine Park (SIMP) and Lord Howe Island Marine Park (LHIMP), to determine variability of bleaching susceptibility among coral taxa; (ii) predict coral bleaching thresholds at 30 °S and 31.5 °S, extrapolate...

Citrus Tristeza Virus on the Island of Crete

DEFF Research Database (Denmark)

Shegani, M.; Tsikou, D.; Velimirovic, A.

2012-01-01

Over a period of two years, more than 5,000 citrus trees were tested for the presence of Citrus tristeza virus (CTV) on the island of Crete, resulting in thirty eight positives. Comparisons of the relative transcript levels of CTV p23, coat protein (CP), polymerase (POL) and an intergenic (POL/p3...

Diameter growth of subtropical trees in Puerto Rico

Science.gov (United States)

Thomas J. Brandeis

2009-01-01

Puerto Rico’s forests consist of young, secondary stands still recovering from a long history of island-wide deforestation that largely abated in the mid-20th century. Limited knowledge about growth rates of subtropical tree species in these forests makes it difficult to accurately predict forest yield, biomass accumulation, and carbon...

Three more Mangrove trees growing locally in nature in freshwater

NARCIS (Netherlands)

Steenis, van C.G.G.J.

1984-01-01

In Christmas Island (Indian Ocean) the mangrove trees Bruguiera gymnorrhiza (L.) Sav., B. sexangula (Lour.) Poir. (Rhizophoraceae) and Heritiera littoralis Ait. (Sterculiaceae) are found inland near freshwater springs at some 20-30 m altitude, far from the beach. It is concluded that the inland

Distribution of cesium-137 in tree crop products collected from residence islands impacted by the U.S. nuclear test program in the northern Marshall Islands

International Nuclear Information System (INIS)

Peters, S.K.G.; Kehl, S.R.; Martinelli, R.E.; Tamblin, M.W.; Hamilton, T.F.

2013-01-01

The Marshall Islands Program at the Lawrence Livermore National Laboratory has completed a series of radiological surveys at Bikini, Rongelap, Utroek, and Enewetak Atolls in the Marshall Islands designed to take a representative sample of food supplies with emphasis on determining 137 Cs activity concentrations in common food plants. Coconuts (Cocos nucifera L.) are the most common and abundant food plant, and provided a common sample type to characterize the level and variability of activity concentrations of 137 Cs in plant foods collected from different islands and atolls. Other dominant food types included Pandanus (Pandanus spp.) and breadfruit (Actocarpus spp.). In general, the activity concentration of 137 Cs in food plants was found to decrease significantly between the main residence islands on Bikini, Rongelap, Utrōk, and Enewetak Atolls. The mean activity concentration of 137 Cs measured in drinking coconut meat and juice was 0.72 (95 % CI 0.68-0.77) and 0.34 (95 % CI 0.30-0.38) Bq g -1 , respectively, on Bikini Island; 0.019 (95 % CI 0.017-0.021) and 0.027 (95 % CI 0.023-0.031) Bq g -1 , respectively, on Rongelap Island; 0.010 (95 % CI 0.007-0.013) and 0.007 (95 % CI 0.004-0.009) Bq g -1 , respectively, on Utroek Island; and 0.002 (95 % CI 0.0013-0.0024) and 0.002 (95 % CI 0.001-0.0025) Bq g -1 , respectively, on Enewetak Island. High levels of variability are reported across all islands. These results will be used to improve the accuracy and reliability of predictive dose assessments, help characterize levels of uncertainty and variability in activity concentrations of fallout radionuclides in plant foods, and allow atoll communities to make informed decisions about resettlement and possible options for cleanup and rehabilitation of islands and atolls. (author)

Wind loads and competition for light sculpt trees into self-similar structures.

Science.gov (United States)

Eloy, Christophe; Fournier, Meriem; Lacointe, André; Moulia, Bruno

2017-10-18

Trees are self-similar structures: their branch lengths and diameters vary allometrically within the tree architecture, with longer and thicker branches near the ground. These tree allometries are often attributed to optimisation of hydraulic sap transport and safety against elastic buckling. Here, we show that these allometries also emerge from a model that includes competition for light, wind biomechanics and no hydraulics. We have developed MECHATREE, a numerical model of trees growing and evolving on a virtual island. With this model, we identify the fittest growth strategy when trees compete for light and allocate their photosynthates to grow seeds, create new branches or reinforce existing ones in response to wind-induced loads. Strikingly, we find that selected trees species are self-similar and follow allometric scalings similar to those observed on dicots and conifers. This result suggests that resistance to wind and competition for light play an essential role in determining tree allometries.

A well-resolved phylogeny of the trees of Puerto Rico based on DNA barcode sequence data.

Science.gov (United States)

Muscarella, Robert; Uriarte, María; Erickson, David L; Swenson, Nathan G; Zimmerman, Jess K; Kress, W John

2014-01-01

The use of phylogenetic information in community ecology and conservation has grown in recent years. Two key issues for community phylogenetics studies, however, are (i) low terminal phylogenetic resolution and (ii) arbitrarily defined species pools. We used three DNA barcodes (plastid DNA regions rbcL, matK, and trnH-psbA) to infer a phylogeny for 527 native and naturalized trees of Puerto Rico, representing the vast majority of the entire tree flora of the island (89%). We used a maximum likelihood (ML) approach with and without a constraint tree that enforced monophyly of recognized plant orders. Based on 50% consensus trees, the ML analyses improved phylogenetic resolution relative to a comparable phylogeny generated with Phylomatic (proportion of internal nodes resolved: constrained ML = 74%, unconstrained ML = 68%, Phylomatic = 52%). We quantified the phylogenetic composition of 15 protected forests in Puerto Rico using the constrained ML and Phylomatic phylogenies. We found some evidence that tree communities in areas of high water stress were relatively phylogenetically clustered. Reducing the scale at which the species pool was defined (from island to soil types) changed some of our results depending on which phylogeny (ML vs. Phylomatic) was used. Overall, the increased terminal resolution provided by the ML phylogeny revealed additional patterns that were not observed with a less-resolved phylogeny. With the DNA barcode phylogeny presented here (based on an island-wide species pool), we show that a more fully resolved phylogeny increases power to detect nonrandom patterns of community composition in several Puerto Rican tree communities. Especially if combined with additional information on species functional traits and geographic distributions, this phylogeny will (i) facilitate stronger inferences about the role of historical processes in governing the assembly and composition of Puerto Rican forests, (ii) provide insight into Caribbean

Postglacial vegetation history of Mitkof Island, Alexander Archipelago, southeastern Alaska

Science.gov (United States)

Ager, Thomas A.; Carrara, Paul E.; Smith, Jane L.; Anne, Victoria; Johnson, Joni

2010-03-01

An AMS radiocarbon-dated pollen record from a peat deposit on Mitkof Island, southeastern Alaska provides a vegetation history spanning ˜12,900 cal yr BP to the present. Late Wisconsin glaciers covered the entire island; deglaciation occurred > 15,400 cal yr BP. The earliest known vegetation to develop on the island (˜12,900 cal yr BP) was pine woodland ( Pinus contorta) with alder ( Alnus), sedges (Cyperaceae) and ferns (Polypodiaceae type). By ˜12,240 cal yr BP, Sitka spruce ( Picea sitchensis) began to colonize the island while pine woodland declined. By ˜11,200 cal yr BP, mountain hemlock ( Tsuga mertensiana) began to spread across the island. Sitka spruce-mountain hemlock forests dominated the lowland landscapes of the island until ˜10,180 cal yr BP, when western hemlock ( Tsuga heterophylla) began to colonize, and soon became the dominant tree species. Rising percentages of pine, sedge, and sphagnum after ˜7100 cal yr BP may reflect an expansion of peat bog habitats as regional climate began to shift to cooler, wetter conditions. A decline in alders at that time suggests that coastal forests had spread into the island's uplands, replacing large areas of alder thickets. Cedars ( Chamaecyparis nootkatensis, Thuja plicata) appeared on Mitkof Island during the late Holocene.

Long-term ecology resolves the timing, region of origin and process of establishment for a disputed alien tree.

Science.gov (United States)

Wilmshurst, Janet M; McGlone, Matt S; Turney, Chris S M

2015-08-26

Alien plants are a pervasive environmental problem, particularly on islands where they can rapidly transform unique indigenous ecosystems. However, often it is difficult to confidently determine whether a species is native or alien, especially if establishment occurred before historical records. This can present a management challenge: for example, should such taxa be eradicated or left alone until their region of origin and status are clarified? Here we show how combining palaeoecological and historical records can help resolve such dilemmas, using the tree daisy Olearia lyallii on the remote New Zealand subantarctic Auckland Islands as a case study. The status of this tree as native or introduced has remained uncertain for the 175 years since it was first discovered on the Auckland Islands, and its appropriate management is debated. Elsewhere, O. lyallii has a highly restricted distribution on small sea bird-rich islands within a 2° latitudinal band south of mainland New Zealand. Analysis of palaeoecological and historical records from the Auckland Islands suggest that O. lyallii established there c. 1807 when these islands were first exploited by European sealers. Establishment was facilitated by anthropogenic burning and clearing and its subsequent spread has been slow, limited in distribution and probably human-assisted. Olearia lyallii has succeeded mostly in highly disturbed sites which are also nutrient enriched from nesting sea birds, seals and sea spray. This marine subsidy has fuelled the rapid growth of O. lyallii and allowed this tree to be competitive against the maritime communities it has replaced. Although endemic to the New Zealand region, our evidence suggests that O. lyallii is alien to the Auckland Islands. Although such 'native' aliens can pose unique management challenges on islands, in this instance we suggest that ongoing monitoring with no control is an appropriate management action, as O. lyallii appears to pose minimal risk to

Nesting biology of Black-shouldered Kite (Elanus caeruleus) in oil palm landscape in Carey Island, Peninsular Malaysia.

Science.gov (United States)

Ramli, Rosli; Fauzi, Aimi

2018-03-01

Black-shouldered Kite ( Elanus caeruleus ) is a well-known raptor that inhabits open areas such as oil palm plantation or paddy field. To determine preferable habitat and nesting site of Black-shouldered Kite in oil palm landscape, we conducted a study on Black-shouldered Kite's nesting biology in Carey Island, Selangor, Malaysia. We divided the island into six types of habitat and conducted road-side count of Black-shouldered Kite from April 2009 to February 2011. Whenever the Black-shouldered Kite was detected, we thoroughly searched the surrounding area for their nest. In total, we have recorded forty nests. The nests were built on 15 species of trees but most of the trees shared common physical characteristics. Some novice breeders also used oil palm tree as their nesting site. Structure and building materials of nests constructed on oil palm trees were different from nests built on other trees. Of all breeding attempts, only four nests which were located in residential area adjacent to young oil palm habitat were successful. Among important characteristics of successful nesting site include taller trees with strong branches and good leaf coverage. These trees not only protect nests from predator detection (except from other predatory birds) and physical environment but also facilitate Black-shouldered Kite's foraging activities by providing good vantage point.

The invasive alien tree Falcataria moluccana: its impacts and management

Science.gov (United States)

Flint Hughes; Tracy Johnson; Amanda Uowolo

2013-01-01

Falcataria moluccana (Miq.) Barneby and Grimes is a large tree that has become invasive in forests and developed landscapes across many Pacific islands. A fast-growing nitrogenfixing species, it transforms invaded ecosystems by dramatically increasing nutrient inputs, suppressing native species and facilitating invasion by other weeds. Individuals rapidly reach heights...

Regional variation in Caribbean dry forest tree species composition

Science.gov (United States)

Janet Franklin; Julie Ripplinger; Ethan H. Freid; Humfredo Marcano-Vega; David W. Steadman

2015-01-01

How does tree species composition vary in relation to geographical and environmental gradients in a globally rare tropical/subtropical broadleaf dry forest community in the Caribbean? We analyzed data from 153 Forest Inventory and Analysis (FIA) plots from Puerto Rico and the U.S. Virgin Islands (USVI), along with 42 plots that we sampled in the Bahamian Archipelago (...

Nesting biology of Black-shouldered Kite (Elanus caeruleus in oil palm landscape in Carey Island, Peninsular Malaysia

Directory of Open Access Journals (Sweden)

Rosli Ramli

2018-03-01

Full Text Available Black-shouldered Kite (Elanus caeruleus is a well-known raptor that inhabits open areas such as oil palm plantation or paddy field. To determine preferable habitat and nesting site of Black-shouldered Kite in oil palm landscape, we conducted a study on Black-shouldered Kite’s nesting biology in Carey Island, Selangor, Malaysia. We divided the island into six types of habitat and conducted road-side count of Black-shouldered Kite from April 2009 to February 2011. Whenever the Black-shouldered Kite was detected, we thoroughly searched the surrounding area for their nest. In total, we have recorded forty nests. The nests were built on 15 species of trees but most of the trees shared common physical characteristics. Some novice breeders also used oil palm tree as their nesting site. Structure and building materials of nests constructed on oil palm trees were different from nests built on other trees. Of all breeding attempts, only four nests which were located in residential area adjacent to young oil palm habitat were successful. Among important characteristics of successful nesting site include taller trees with strong branches and good leaf coverage. These trees not only protect nests from predator detection (except from other predatory birds and physical environment but also facilitate Black-shouldered Kite’s foraging activities by providing good vantage point. Keywords: Road-side counts, Direct observation, Breeding raptors, Nesting tree, Habitat selection

Distribution and Ratios of 137Cs and K in Control and K-treated Coconut Trees at Bikini Island where Nuclear Test Fallout Occurred: Effects and Implications

Energy Technology Data Exchange (ETDEWEB)

Robison, W L; Brown, P H; Stone, E L; Hamilton, T F; Conrado, C L; Kehl, S R

2008-05-19

Coconut trees growing on atolls of the Bikini Islands are on the margin of K deficiency because the concentration of exchangeable K in coral soil is very low ranging from only 20 to 80 mg kg{sup -1}. When provided with additional K, coconut trees absorb large quantities of K and this uptake of K significantly alters the patterns of distribution of {sup 137}Cs within the plant. Following a single K fertilization event, mean total K in trunks of K-treated trees is 5.6 times greater than in trunks of control trees. In contrast, {sup 137}Cs concentration in trunks of K-treated and control trees is statistically the same while {sup 137}Cs is significantly lower in edible fruits of K treated trees. Within one year after fertilization (one rainy season), K concentration in soil is back to naturally, low concentrations, however, the tissue concentrations of K in treated trees stays very high internally in the trees for years while {sup 137}Cs concentration in treated trees remains very low in all tree compartments except for the trunk. Potassium fertilization did not change soil Cs availability. Mass balance calculations suggest that the fertilization event increased above ground plant K content by at least a factor of 5 or 2.2 kg. Potassium concentrations and content were higher in all organs of K fertilized trees with the greatest increases seen in organs that receive a portion of tissue K through xylem transport (trunk, fronds and fruit husks) and lowest in organs supplied predominantly with K via the phloem (palm heart, spathe, coco meat and fluid). {sup 137}Cesium concentrations and contents were dramatically lower in all organs of K treated trees with greatest proportional reductions observed in organs supplied predominantly with K via the phloem (palm heart, spathe, coco meat and fluid). All trees remobilize both K and {sup 137}Cs from fronds as they proceed toward senescence. In control trees the reduction in concentration of K and {sup 137}Cs in fronds as they age

Distribution and ratios of 137Cs and K in control and K-treated coconut trees at Bikini Island where nuclear test fallout occurred: effects and implications

International Nuclear Information System (INIS)

Robison, William L.; Brown, Patrick H.; Stone, Earl L.; Hamilton, Terry F.; Conrado, Cynthia L.; Kehl, Steven

2009-01-01

Coconut trees growing on atolls of the Bikini Islands are on the margin of K deficiency because the concentration of exchangeable K in coral soil is very low, ranging from only 20 to 80 mg kg -1 . When provided with additional K, coconut trees absorb large quantities of K and this uptake of K significantly alters the patterns of distribution of 137 Cs within the plant. Following a single K fertilization event, mean total K in trunks of K-treated trees is 5.6 times greater than in trunks of control trees. In contrast, 137 Cs concentration in trunks of K-treated and control trees is statistically the same while 137 Cs is significantly lower in edible fruits of K-treated trees. Within one year after fertilization (one rainy season), K concentration in soil is back to naturally low concentrations. However, the tissue concentrations of K in treated trees stays very high internally in the trees for years while 137 Cs concentration in treated trees remains very low in all tree compartments except for the trunk. Potassium fertilization did not change soil Cs availability. Mass balance calculations suggest that the fertilization event increased above ground plant K content by at least a factor of 5 (2.2 kg). Potassium concentrations and content were higher in all organs of K-fertilized trees with the greatest increases seen in organs that receive a portion of tissue K through xylem transport (trunk, fronds and fruit husks) and lowest in organs supplied predominantly with K via the phloem (palm heart, spathe, coco meat and fluid). The 137 Cesium concentrations and contents were dramatically lower in all organs of K-treated trees with greatest proportional reductions observed in organs supplied predominantly with K via the phloem (palm heart, spathe, coco meat and fluid). All trees remobilize both K and 137 Cs from fronds as they proceed toward senescence. In control trees the reduction in concentration of K and 137 Cs in fronds as they age is logarithmic, but K

Estimating Coextinction Risks from Epidemic Tree Death: Affiliate Lichen Communities among Diseased Host Tree Populations of Fraxinus excelsior

Science.gov (United States)

Jönsson, Mari T.; Thor, Göran

2012-01-01

At least 10% of the world’s tree species are threatened with extinction and pathogens are increasingly implicated in tree threats. Coextinction and threats to affiliates as a consequence of the loss or decline of their host trees is a poorly understood phenomenon. Ash dieback is an emerging infectious disease causing severe dieback of common ash Fraxinus excelsior throughout Europe. We utilized available empirical data on affiliate epiphytic lichen diversity (174 species and 17,800 observations) among 20 ash dieback infected host tree populations of F. excelsior on the island Gotland in the Baltic Sea, Sweden. From this, we used structured scenario projections scaled with empirical data of ash dieback disease to generate probabilistic models for estimating local and regional lichen coextinction risks. Average coextinction probabilities (Ā) were 0.38 (95% CI ±0.09) for lichens occurring on F. excelsior and 0.14 (95% CI ±0.03) when considering lichen persistence on all tree species. Ā was strongly linked to local disease incidence levels and generally increasing with lichen host specificity to F. excelsior and decreasing population size. Coextinctions reduced affiliate community viability, with significant local reductions in species richness and shifts in lichen species composition. Affiliates were projected to become locally extirpated before their hosts, illuminating the need to also consider host tree declines. Traditionally managed open wooded meadows had the highest incidence of ash dieback disease and significantly higher proportions of affiliate species projected to go extinct, compared with unmanaged closed forests and semi-open grazed sites. Most cothreatened species were not previously red-listed, which suggest that tree epidemics cause many unforeseen threats to species. Our analysis shows that epidemic tree deaths represent an insidious, mostly overlooked, threat to sessile affiliate communities in forested environments. Current conservation and

Origin and Evolution of Nitrogen Fixation Genes on Symbiosis Islands and Plasmid in Bradyrhizobium

Science.gov (United States)

Okubo, Takashi; Piromyou, Pongdet; Tittabutr, Panlada; Teaumroong, Neung; Minamisawa, Kiwamu

2016-01-01

The nitrogen fixation (nif) genes of nodule-forming Bradyrhizobium strains are generally located on symbiosis islands or symbiosis plasmids, suggesting that these genes have been transferred laterally. The nif genes of rhizobial and non-rhizobial Bradyrhizobium strains were compared in order to infer the evolutionary histories of nif genes. Based on all codon positions, the phylogenetic tree of concatenated nifD and nifK sequences showed that nifDK on symbiosis islands formed a different clade from nifDK on non-symbiotic loci (located outside of symbiosis islands and plasmids) with elongated branches; however, these genes were located in close proximity, when only the 1st and 2nd codon positions were analyzed. The guanine (G) and cytosine (C) content of the 3rd codon position of nifDK on symbiosis islands was lower than that on non-symbiotic loci. These results suggest that nif genes on symbiosis islands were derived from the non-symbiotic loci of Bradyrhizobium or closely related strains and have evolved toward a lower GC content with a higher substitution rate than the ancestral state. Meanwhile, nifDK on symbiosis plasmids clustered with nifDK on non-symbiotic loci in the tree representing all codon positions, and the GC content of symbiotic and non-symbiotic loci were similar. These results suggest that nif genes on symbiosis plasmids were derived from the non-symbiotic loci of Bradyrhizobium and have evolved with a similar evolutionary pattern and rate as the ancestral state. PMID:27431195

Regional climate pattern during two millennia estimated from annual tree rings of Yaku cedar trees: a hint for solar variability?

Science.gov (United States)

Muraki, Yasushi; Mitsutani, Takumi; Shibata, Shoichi; Kuramata, Syuichi; Masuda, Kimiaki; Nagaya, Kentaro

2015-02-01

We analyzed trees that have survived on Yaku island (Yakushima) for 2,000 years. Quite surprisingly, the Fourier and wavelet analyses of the annual growth rate identified 2 cycles of periodicities of 11 and (24 ± 4) years during the Oort, Wolf, Spörer, Maunder, and Dalton minima. The 11-year periodicity originated from solar activity, while the (24 ± 4)-year periodicity may be related to the Pacific Decadal Oscillation (PDO). In particular, we have discovered an 11-year periodicity in the meteorological daylight-hour data from Yakushima in the month of June during 1938 to 2013 and a 24-year periodicity in July. The growth rate of the tree rings may be affected by the variation of the daylight hour.

Distribution and ratios of {sup 137}Cs and K in control and K-treated coconut trees at Bikini Island where nuclear test fallout occurred: effects and implications

Energy Technology Data Exchange (ETDEWEB)

Robison, William L. [Lawrence Livermore National Laboratory, 7000 East Avenue, L-642, Livermore, CA 94550-9234 (United States)], E-mail: robison1@llnl.gov; Brown, Patrick H. [University of California, Department of Plant Sciences, Davis, CA 95819 (United States); Stone, Earl L. [University of Florida (United States); Hamilton, Terry F.; Conrado, Cynthia L.; Kehl, Steven [Lawrence Livermore National Laboratory, 7000 East Avenue, L-642, Livermore, CA 94550-9234 (United States)

2009-01-15

Coconut trees growing on atolls of the Bikini Islands are on the margin of K deficiency because the concentration of exchangeable K in coral soil is very low, ranging from only 20 to 80 mg kg{sup -1}. When provided with additional K, coconut trees absorb large quantities of K and this uptake of K significantly alters the patterns of distribution of {sup 137}Cs within the plant. Following a single K fertilization event, mean total K in trunks of K-treated trees is 5.6 times greater than in trunks of control trees. In contrast, {sup 137}Cs concentration in trunks of K-treated and control trees is statistically the same while {sup 137}Cs is significantly lower in edible fruits of K-treated trees. Within one year after fertilization (one rainy season), K concentration in soil is back to naturally low concentrations. However, the tissue concentrations of K in treated trees stays very high internally in the trees for years while {sup 137}Cs concentration in treated trees remains very low in all tree compartments except for the trunk. Potassium fertilization did not change soil Cs availability. Mass balance calculations suggest that the fertilization event increased above ground plant K content by at least a factor of 5 (2.2 kg). Potassium concentrations and content were higher in all organs of K-fertilized trees with the greatest increases seen in organs that receive a portion of tissue K through xylem transport (trunk, fronds and fruit husks) and lowest in organs supplied predominantly with K via the phloem (palm heart, spathe, coco meat and fluid). The {sup 137}Cesium concentrations and contents were dramatically lower in all organs of K-treated trees with greatest proportional reductions observed in organs supplied predominantly with K via the phloem (palm heart, spathe, coco meat and fluid). All trees remobilize both K and {sup 137}Cs from fronds as they proceed toward senescence. In control trees the reduction in concentration of K and {sup 137}Cs in fronds as they

Low genetic diversity and local adaptive divergence of Dracaena cambodiana (Liliaceae) populations associated with historical population bottlenecks and natural selection: an endangered long-lived tree endemic to Hainan Island, China.

Science.gov (United States)

Zheng, D-J; Xie, L-S; Zhu, J-H; Zhang, Z-L

2012-09-01

Historical population bottlenecks and natural selection have important effects on the current genetic diversity and structure of long-lived trees. Dracaena cambodiana is an endangered, long-lived tree endemic to Hainan Island, China. Our field investigations showed that only 10 populations remain on Hainan Island and that almost all have been seriously isolated and grow in distinct habitats. A considerable amount of genetic variation at the species level, but little variation at the population level, and a high level of genetic differentiation among the populations with limited gene flow in D. cambodiana were detected using inter-simple sequence repeat (ISSR) and random amplified polymorphic DNA (RAPD) analyses. No significant correlation was found between genetic diversity and actual population size, as the genetic diversities were similar regardless of population size. The Mantel test revealed that there was no correlation between genetic and geographic distances among the 10 populations. The UPGMA, PCoA and Bayesian analyses showed that local adaptive divergence has occurred among the D. cambodiana populations, which was further supported by habitat-private fragments. We suggest that the current genetic diversity and population differentiation of D. cambodiana resulted from historical population bottlenecks and natural selection followed by historical isolation. However, the lack of natural regeneration of D. cambodiana indicates that former local adaptations with low genetic diversity may have been genetically weak and are unable to adapt to the current ecological environments. © 2012 German Botanical Society and The Royal Botanical Society of the Netherlands.

Little dragons prefer flowers to maidens: a lizard that laps nectar and pollinates trees

OpenAIRE

Sazima, Ivan; Sazima, Cristina; Sazima, Marlies

2005-01-01

Lizards rarely visit and pollinate flowers, the few recent records being mostly restricted to island habitats. We report here on the Noronha skink (Euprepis atlanticus) seeking nectar in the flowers of the leguminous mulungu tree (Erythrina velutina) at Fernando de Noronha Archipelago, off northeast Brazil. The mulungu tree blooms during the dry season, and each flower secretes copious and diluted nectar throughout the day. The Noronha skink climbs up to the inflorescences and laps the nectar...

Tree Flora of Sabah and Sarawak project – progress and future activities

NARCIS (Netherlands)

Tan, H.S.; Nadiah, I.; Eryani, S.S.

2009-01-01

Tropical forests in Borneo (Brunei Darussalam, Kalimantan, Sabah and Sarawak) are considered as one of the twelve mega biodiversity centres in the world. However, until now, there is no up-to-date or complete documentation on the flora of the island. The Tree Flora of Sabah and Sarawak Project,

Soil surface temperatures reveal moderation of the urban heat island effect by trees and shrubs

DEFF Research Database (Denmark)

Edmondson, Jill L; Stott, Iain; Davies, Zoe G

2016-01-01

months increased by 0.6 °C over the 5 km from the city outskirts to the centre. Trees and shrubs in non-domestic greenspace reduced mean maximum daily soil surface temperatures in the summer by 5.7 °C compared to herbaceous vegetation, but tended to maintain slightly higher temperatures in winter. Trees...... in domestic gardens, which tend to be smaller, were less effective at reducing summer soil surface temperatures. Our findings reveal that the UHI effects soil temperatures at a city-wide scale, and that in their moderating urban soil surface temperature extremes, trees and shrubs may help to reduce...

Detailed forest formation mapping in the land cover map series for the Caribbean islands

Science.gov (United States)

Helmer, E. H.; Schill, S.; Pedreros, D. H.; Tieszen, L. L.; Kennaway, T.; Cushing, M.; Ruzycki, T.

2006-12-01

Forest formation and land cover maps for several Caribbean islands were developed from Landsat ETM+ imagery as part of a multi-organizational project. The spatially explicit data on forest formation types will permit more refined estimates of some forest attributes. The woody vegetation classification scheme relates closely to that of Areces-Malea et al. (1), who classify Caribbean vegetation according to standards of the US Federal Geographic Data Committee (FGDC, 1997), with modifications similar to those in Helmer et al. (2). For several of the islands, we developed image mosaics that filled cloudy parts of scenes with data from other scene dates after using regression tree normalization (3). The regression tree procedure permitted us to develop mosaics for wet and drought seasons for a few of the islands. The resulting multiseason imagery facilitated separation between classes such as seasonal evergreen forest, semi-deciduous forest (including semi-evergreen forest), and drought deciduous forest or woodland formations. We used decision tree classification methods to classify the Landsat image mosaics to detailed forest formations and land cover for Puerto Rico (4), St. Kitts and Nevis, St. Lucia, St. Vincent and the Grenadines and Grenada. The decision trees classified a stack of raster layers for each mapping area that included the Landsat image bands and various ancillary raster data layers. For Puerto Rico, for example, the ancillary data included climate parameters (5). For some islands, the ancillary data included topographic derivatives such as aspect, slope and slope position, SRTM (6) or other topographic data. Mapping forest formations with decision tree classifiers, ancillary geospatial data, and cloud-free image mosaics, accurately distinguished spectrally similar forest formations, without the aid of ecological zone maps, on the islands where the approach was used. The approach resulted in maps of forest formations with comparable or better detail

Seed dispersal and establishment of endangered plants on Oceanic Islands: the Janzen-Connell model, and the use of ecological analogues.

Directory of Open Access Journals (Sweden)

Dennis M Hansen

Full Text Available BACKGROUND: The Janzen-Connell model states that plant-specific natural enemies may have a disproportionately large negative effect on progeny close to maternal trees. The majority of experimental and theoretical studies addressing the Janzen-Connell model have explored how it can explain existing patterns of species diversity in tropical mainland areas. Very few studies have investigated how the model's predictions apply to isolated oceanic islands, or to the conservation management of endangered plants. Here, we provide the first experimental investigation of the predictions of the Janzen-Connell model on an oceanic island, in a conservation context. In addition, we experimentally evaluate the use of ecological analogue animals to resurrect the functional component of extinct frugivores that could have dispersed seeds away from maternal trees. METHODOLOGY/PRINCIPAL FINDINGS: In Mauritius, we investigated seed germination and seedling survival patterns of the critically endangered endemic plant Syzygium mamillatum (Myrtaceae in relation to proximity to maternal trees. We found strong negative effects of proximity to maternal trees on growth and survival of seedlings. We successfully used giant Aldabran tortoises as ecological analogues for extinct Mauritian frugivores. Effects of gut-passage were negative at the seed germination stage, but seedlings from gut-passed seeds grew taller, had more leaves, and suffered less damage from natural enemies than any of the other seedlings. CONCLUSIONS/SIGNIFICANCE: We provide the first experimental evidence of a distance-dependent Janzen-Connell effect on an oceanic island. Our results potentially have serious implications for the conservation management of rare plant species on oceanic islands, which harbour a disproportionately large fraction of the world's endemic and endangered plants. Furthermore, in contrast to recent controversy about the use of non-indigenous extant megafauna for re

Modeling and Testing Landslide Hazard Using Decision Tree

Directory of Open Access Journals (Sweden)

Mutasem Sh. Alkhasawneh

2014-01-01

Full Text Available This paper proposes a decision tree model for specifying the importance of 21 factors causing the landslides in a wide area of Penang Island, Malaysia. These factors are vegetation cover, distance from the fault line, slope angle, cross curvature, slope aspect, distance from road, geology, diagonal length, longitude curvature, rugosity, plan curvature, elevation, rain perception, soil texture, surface area, distance from drainage, roughness, land cover, general curvature, tangent curvature, and profile curvature. Decision tree models are used for prediction, classification, and factors importance and are usually represented by an easy to interpret tree like structure. Four models were created using Chi-square Automatic Interaction Detector (CHAID, Exhaustive CHAID, Classification and Regression Tree (CRT, and Quick-Unbiased-Efficient Statistical Tree (QUEST. Twenty-one factors were extracted using digital elevation models (DEMs and then used as input variables for the models. A data set of 137570 samples was selected for each variable in the analysis, where 68786 samples represent landslides and 68786 samples represent no landslides. 10-fold cross-validation was employed for testing the models. The highest accuracy was achieved using Exhaustive CHAID (82.0% compared to CHAID (81.9%, CRT (75.6%, and QUEST (74.0% model. Across the four models, five factors were identified as most important factors which are slope angle, distance from drainage, surface area, slope aspect, and cross curvature.

The Brown Tree Snake on Guam: How the Arrival of One Invasive Species Damaged the Ecology, Commerce, Electrical Systems and Human Health on Guam: A Comprehensive Information Source

Science.gov (United States)

Fritts, Thomas H.; Leasman-Tanner, Dawn

2001-01-01

Synopsis -- Shortly after World War II, and before 1952, the brown tree snake was accidentally transported from its native range in the South Pacific to Guam, probably as a stowaway in ship cargo. As a result of abnormally abundant prey resources on Guam and the absence of natural predators and other population controls, brown tree snake populations reached unprecedented numbers. Snakes caused the extirpation of most of the native forest vertebrate species; thousands of power outages affecting private, commercial, and military activities; widespread loss of domestic birds and pets; and considerable emotional trauma to residents and visitors alike when snakes invaded human habitats with the potential for severe envenomation of small children. Since Guam is a major transportation hub in the Pacific, numerous opportunities exist for the brown tree snakes on Guam to be introduced accidentally to other Pacific islands as passive stowaways in ship and air traffic from Guam. Numerous sightings of this species have been reported on other islands, and an incipient population is probably established on Saipan. It is important that people who may come in contact with the brown tree snake, particularly on neighboring islands and other high-risk sites, understand the scope of this problem and how to identify the snake so proper action can be taken. This resource has been developed to provide source materials on the history of the invasion, continuing threats, research results, and containment and management of the brown tree snake (Boiga irregularis) in Guam and its relevance to other islands and mild continental environments.

Evaluation of Decision Trees for Cloud Detection from AVHRR Data

Science.gov (United States)

Shiffman, Smadar; Nemani, Ramakrishna

2005-01-01

Automated cloud detection and tracking is an important step in assessing changes in radiation budgets associated with global climate change via remote sensing. Data products based on satellite imagery are available to the scientific community for studying trends in the Earth's atmosphere. The data products include pixel-based cloud masks that assign cloud-cover classifications to pixels. Many cloud-mask algorithms have the form of decision trees. The decision trees employ sequential tests that scientists designed based on empirical astrophysics studies and simulations. Limitations of existing cloud masks restrict our ability to accurately track changes in cloud patterns over time. In a previous study we compared automatically learned decision trees to cloud masks included in Advanced Very High Resolution Radiometer (AVHRR) data products from the year 2000. In this paper we report the replication of the study for five-year data, and for a gold standard based on surface observations performed by scientists at weather stations in the British Islands. For our sample data, the accuracy of automatically learned decision trees was greater than the accuracy of the cloud masks p < 0.001.

Threatened pollination systems in native flora of the Ogasawara (Bonin) Islands.

Science.gov (United States)

Abe, Tetsuto

2006-08-01

Various alien species have been introduced to the Ogasawara Islands (Japan). A survey was made investigating whether the native pollination systems fit an 'island syndrome' (biasing the flora to dioecy, with subdued, inconspicuous flowers) and whether alien species have disrupted the native pollination network. Flower visitors and floral traits were determined in the field (12 islands) and from the literature. Associations among floral traits such as sexual expression, flower colour and flower shape were tested. Among the 269 native flowering plants, 74.7 % are hermaphroditic, 13.0 % are dioecious and 7.1 % are monoecious. Classification by flower colour revealed that 36.0 % were white, 21.6 % green and 13.8 % yellow. Woody species (trees and shrubs) comprised 36.5 % of the flora and were associated with dioecy and white flowers. Solitary, endemic small bees were the dominant flower visitors and visited 66.7 % of the observed species on satellite islands where the native pollination networks are preserved. In contrast to the situation on the satellite islands, introduced honeybees were the most dominant pollinator (visiting 60.1 % of observed species) on the two main islands, Chichi-jima and Haha-jima, and had spread to satellite islands near Chichi-jima Island. The island syndrome for pollination systems in the Ogasawara Islands was evident in a high percentage of dioecious species, the subdued colour of the native flora and solitary flower visitors on satellite islands. The shape and colour adaptations of several flowers suggested native pollination niches for long-proboscis moths and carpenter bees. However, the domination and expansion of introduced honeybees have the potential for disruption of the native pollination network in the two main, and several satellite, islands of the Ogasawara Islands.

Available nitrogen: A time-based study of manipulated resource islands

Science.gov (United States)

Stubbs, Michelle M.; Pyke, David A.

2005-01-01

Spatial and temporal heterogeneity of available nitrogen are critical determinants of the distribution and abundance of plants and animals in ecosystems. Evidence for the resource island theory suggests that soils below tree and shrub canopies contain higher amounts of resources, including available nitrogen, than are present in interspace areas. Disturbances, such as prescribed fire and tree removal, are common management practices in shrub-woodland ecosystems, but it is not known if these practices affect resource islands. We examined temporal variation in resource islands of available nitrogen and their retention after fire and woody plant removal. From August 1997 to October 1998, soil nitrate (NO3−) and ammonium (NH4+) were measured monthly from canopy and interspace plots within four juniper-sagebrush sites along a precipitation gradient in central Oregon, USA. At each site, soil samples were collected from untreated plots, plots in which woody plants were removed, and those treated with prescribed fire in fall 1997. In burned treatments, canopy concentrations were significantly higher than interspace concentrations throughout the measurement period. Canopy NO3− and NH4+ concentrations were significantly higher on burned vs. unburned treatments for four months after fire. After woody plant removal, NO3− and NH4+ concentrations did not differ from the controls. Untreated control areas had higher NO3− and NH4+ concentrations under juniper canopies for nearly all months. Wetter sites had smaller differences between canopy and interspace concentrations through time than did the two drier sites. In relation to NO3− and NH4+ in this ecosystem, resource islands appear to be more ephemeral in wetter sites, and more pronounced following fire disturbances than in controls or those treated by woody plant removal.

The invasive alien plants threatened the balance of ecosystem in conservative area in Ontoloe Island, Flores-Indonesia

Science.gov (United States)

Antonius Mboka Segu Wake, Ignatius; Retnaningsih Soeprobowati, Tri; Jumari

2018-05-01

Invasive alien plants threaten to biodiversity, particularly in small island with high endemicity values such as Ontoloe Island, a tourist destination area of Riung Seventeen Island in Flores. The study aims to characterized the invasive plants have attacked the conservative area in Ontoloe Island. The method used by combining the line method and the plot method with three observation stations in utilization block and four observation station in protection block. Plot of 1mx1m was used for the observation of ground cover plants and seedling, 5mx5m for the observation in stake level, 10mx10m for the observation in pole level, 20mx20m for the observation in tree level. The data level of the plants obtained then analyzed with Important Value Index (IVI). Result showed that Lamtoro plants (Leuchaena leucocephala) is the invasive alien species which has the highest IVI in both of utilization block and protection block in each level of tree, stake, and pole. There are other invasive alien plants such as Tembeleken (Lantana camara) and Bidara (Zizipus mauritiana) dominated in stake level and Alang-alang (Imperata cylindrica) dominated in seedling level. All the native plants in Ontoloe Island will be threatened their existing because of the less control of invasive alien plants. Therefore, needs serious handling by the government in order to keep the balanced of the ecosystems in Ontoloe Island to be maintained especially to not deviated from management objectives area of Komodo Dragons conservation (Varanus komodoensis Ouwens, 1912).

Molecular phylogenies of figs and fig-pollinating wasps in the Ryukyu and Bonin (Ogasawara) islands, Japan.

Science.gov (United States)

Azuma, Hiroshi; Harrison, Rhett D; Nakamura, Keiko; Su, Zhi-Hui

2010-01-01

The interaction between figs (Ficus, Moraceae) and fig-pollinating wasps (Chalcidoidea, Agaonidae) is one of the most specific mutualisms, and thus is a model system for studying coevolution and cospeciation. In this study we focused on figs and their associated fig-wasps found in the Ryukyu and Bonin (Ogasawara) Islands, Japan, because it has been suggested that breakdown in the specificity may occur in islands or at edge of a species' distribution. We collected 136 samples of 15 native fig species and 95 samples of 13 associated fig-wasps from all major islands in the Ryukyu Islands, including two fig species and one fig-wasp species endemic to the Bonin Islands. We performed molecular phylogenetic analyses using plastid DNA and nuclear ITS sequences for the figs and nuclear 28S rRNA and mitochondrial COI genes for the fig-wasps to investigate the interspecific phylogenies and intraspecific variation within the mutualism. Our phylogenetic analyses using multiple samples per species show the single clade of each fig (except the Bonin endemic species) and fig-pollinating wasp species. Fig species belonging to the same subgenera formed well-supported clades in both plastid and ITS trees, except for the subgenus Urostigma. Likewise, fig wasps emerging from host fig species belonging to the same subgenera formed mostly well supported clades in both 28S and COI trees. Host specificity between the figs and fig-wasps functions strictly in these islands. There was very little sequence variation within species, and that no major geographic structure was found. The two Bonin endemic species (F. boninsimae and F. nishimurae) or their common ancestor and the associated fig-wasps (Blastophaga sp.) are apparently derived from F. erecta and its associated fig-wasps (B. nipponica), respectively, and probably migrated from the Ryukyu Islands.

A simple mathematical model of society collapse applied to Easter Island

Science.gov (United States)

Bologna, M.; Flores, J. C.

2008-02-01

In this paper we consider a mathematical model for the evolution and collapse of the Easter Island society. Based on historical reports, the available primary resources consisted almost exclusively in the trees, then we describe the inhabitants and the resources as an isolated dynamical system. A mathematical, and numerical, analysis about the Easter Island community collapse is performed. In particular, we analyze the critical values of the fundamental parameters and a demographic curve is presented. The technological parameter, quantifying the exploitation of the resources, is calculated and applied to the case of another extinguished civilization (Copán Maya) confirming the consistency of the adopted model.

Temporal Dynamics in the Concentration, Flux, and Optical Properties of Tree-derived Dissolved Organic Matter (Tree-DOM) in an Epiphyte-laden Oak-cedar Forest.

Science.gov (United States)

Whitetree, A.; Van Stan, J. T., II; Wagner, S.; Guillemette, F.; Lewis, J.; Silva, L.; Stubbins, A.

2017-12-01

Studies on the fate and transport of dissolved organic matter (DOM) along the rainfall-to-discharge flow pathway typically begin in streams or soils, neglecting the initial enrichment of rainfall with DOM during contact with plant canopies. However, rain water can gather significant amounts of tree-derived DOM (tree-DOM) when it drains from the canopy, as throughfall, and down the stem, as stemflow. We examined the temporal variability of event-scale tree-DOM concentrations, yield, and optical (light absorbance and fluorescence) characteristics from an epiphyte-laden Quercus virginiana-Juniperus virginiana forest on Skidaway Island, Savannah, Georgia (USA). All tree-DOM fluxes were highly enriched compared to rainfall and epiphytes further increased concentrations. Stemflow DOC concentrations were greater than throughfall across study species, yet larger throughfall water yields produced greater DOC yields versus stemflow. Tree-DOM optical characteristics indicate it is aromatic-rich with FDOM dominated by humic-like fluorescence, containing 10-20% protein-like (tryptophan-like) fluorescence. Storm size was the only storm condition that strongly correlated with tree-DOM concentration and flux; however, throughfall and stemflow optical characteristics varied little across a wide range of storm conditions (from low magnitude events to intense tropical storms). Annual tree-DOM yields from the study forest (0.8-46 g-C m-2 yr-1) compared well to other yields along the rainfall-to- discharge flow pathway, exceeding DOM yields from some river watersheds.

Host tree phenology affects vascular epiphytes at the physiological, demographic and community level

Science.gov (United States)

Einzmann, Helena J. R.; Beyschlag, Joachim; Hofhansl, Florian; Wanek, Wolfgang; Zotz, Gerhard

2015-01-01

The processes that govern diverse tropical plant communities have rarely been studied in life forms other than trees. Structurally dependent vascular epiphytes, a major part of tropical biodiversity, grow in a three-dimensional matrix defined by their hosts, but trees differ in their architecture, bark structure/chemistry and leaf phenology. We hypothesized that the resulting seasonal differences in microclimatic conditions in evergreen vs. deciduous trees would affect epiphytes at different levels, from organ physiology to community structure. We studied the influence of tree leaf phenology on vascular epiphytes on the Island of Barro Colorado, Panama. Five tree species were selected, which were deciduous, semi-deciduous or evergreen. The crowns of drought-deciduous trees, characterized by sunnier and drier microclimates, hosted fewer individuals and less diverse epiphyte assemblages. Differences were also observed at a functional level, e.g. epiphyte assemblages in deciduous trees had larger proportions of Crassulacean acid metabolism species and individuals. At the population level a drier microclimate was associated with lower individual growth and survival in a xerophytic fern. Some species also showed, as expected, lower specific leaf area and higher δ13C values when growing in deciduous trees compared with evergreen trees. As hypothesized, host tree leaf phenology influences vascular epiphytes at different levels. Our results suggest a cascading effect of tree composition and associated differences in tree phenology on the diversity and functioning of epiphyte communities in tropical lowland forests. PMID:25392188

Estimating soil turnover rate from tree uprooting during hurricanes in Puerto Rico

Science.gov (United States)

Lenart, M.T.; Falk, D.A.; Scatena, F.N.; Osterkamp, W.R.

2010-01-01

Soil turnover by tree uprooting in primary and secondary forests on the island of Puerto Rico was measured in 42 study plots in the months immediately after the passage of a Category 3 hurricane. Trunk basal area explained 61% of the variability of mound volume and 53% of the variability of mound area. The proportion of uprooted trees, the number of uprooted trees, or the proportion of uprooted basal area explained 84-85% of the variation in hurricane-created mound area. These same variables explain 79-85% of the variation in mound volume. The study indicates that the soil turnover period from tree uprooting by Puerto Rican hurricanes is between 1600 and 4800 years. These rates are faster than soil turnover by landslides and background treefall in the same area and provide a useful age constraint on soil profile development and soil carbon sequestration in these dynamic landscapes. ?? 2009 Elsevier B.V.

Predicting spatial variations of tree species richness in tropical forests from high-resolution remote sensing.

Science.gov (United States)

Fricker, Geoffrey A; Wolf, Jeffrey A; Saatchi, Sassan S; Gillespie, Thomas W

2015-10-01

There is an increasing interest in identifying theories, empirical data sets, and remote-sensing metrics that can quantify tropical forest alpha diversity at a landscape scale. Quantifying patterns of tree species richness in the field is time consuming, especially in regions with over 100 tree species/ha. We examine species richness in a 50-ha plot in Barro Colorado Island in Panama and test if biophysical measurements of canopy reflectance from high-resolution satellite imagery and detailed vertical forest structure and topography from light detection and ranging (lidar) are associated with species richness across four tree size classes (>1, 1-10, >10, and >20 cm dbh) and three spatial scales (1, 0.25, and 0.04 ha). We use the 2010 tree inventory, including 204,757 individuals belonging to 301 species of freestanding woody plants or 166 ± 1.5 species/ha (mean ± SE), to compare with remote-sensing data. All remote-sensing metrics became less correlated with species richness as spatial resolution decreased from 1.0 ha to 0.04 ha and tree size increased from 1 cm to 20 cm dbh. When all stems with dbh > 1 cm in 1-ha plots were compared to remote-sensing metrics, standard deviation in canopy reflectance explained 13% of the variance in species richness. The standard deviations of canopy height and the topographic wetness index (TWI) derived from lidar were the best metrics to explain the spatial variance in species richness (15% and 24%, respectively). Using multiple regression models, we made predictions of species richness across Barro Colorado Island (BCI) at the 1-ha spatial scale for different tree size classes. We predicted variation in tree species richness among all plants (adjusted r² = 0.35) and trees with dbh > 10 cm (adjusted r² = 0.25). However, the best model results were for understory trees and shrubs (dbh 1-10 cm) (adjusted r² = 0.52) that comprise the majority of species richness in tropical forests. Our results indicate that high

Computational Intelligence based techniques for islanding detection of distributed generation in distribution network: A review

International Nuclear Information System (INIS)

Laghari, J.A.; Mokhlis, H.; Karimi, M.; Bakar, A.H.A.; Mohamad, Hasmaini

2014-01-01

Highlights: • Unintentional and intentional islanding, their causes, and solutions are presented. • Remote, passive, active and hybrid islanding detection techniques are discussed. • The limitation of these techniques in accurately detect islanding are discussed. • Computational intelligence techniques ability in detecting islanding is discussed. • Review of ANN, fuzzy logic control, ANFIS, Decision tree techniques is provided. - Abstract: Accurate and fast islanding detection of distributed generation is highly important for its successful operation in distribution networks. Up to now, various islanding detection technique based on communication, passive, active and hybrid methods have been proposed. However, each technique suffers from certain demerits that cause inaccuracies in islanding detection. Computational intelligence based techniques, due to their robustness and flexibility in dealing with complex nonlinear systems, is an option that might solve this problem. This paper aims to provide a comprehensive review of computational intelligence based techniques applied for islanding detection of distributed generation. Moreover, the paper compares the accuracies of computational intelligence based techniques over existing techniques to provide a handful of information for industries and utility researchers to determine the best method for their respective system

Phylogenetic analyses suggest a hybrid origin of the figs (Moraceae: Ficus) that are endemic to the Ogasawara (Bonin) Islands, Japan.

Science.gov (United States)

Kusumi, Junko; Azuma, Hiroshi; Tzeng, Hsy-Yu; Chou, Lien-Siang; Peng, Yan-Qiong; Nakamura, Keiko; Su, Zhi-Hui

2012-04-01

The Ogasawara Islands are oceanic islands and harbor a unique endemic flora. There are three fig species (Ficus boninsimae, F. nishimurae and F. iidaiana) endemic to the Ogasawara Islands, and these species have been considered to be closely related to Ficus erecta, and to have diverged within the islands. However, this hypothesis remains uncertain. To investigate this issue, we assessed the phylogenetic relationships of the Ogasawara figs and their close relatives occurring in Japan, Taiwan and South China based on six plastid genome regions, nuclear ITS region and two nuclear genes. The plastid genome-based tree indicated a close relationship between the Ogasawara figs and F. erecta, whereas some of the nuclear gene-based trees suggested this relationship was not so close. In addition, the phylogenetic analyses of the pollinating wasps associated with these fig species based on the nuclear 28S rRNA and mitochondrial cytB genes suggested that the fig-pollinating wasps of F. erecta are not sister to those of the Ogasawara figs These results suggest the occurrence of an early hybridization event(s) in the lineage leading to the Ogasawara figs. Copyright © 2012 Elsevier Inc. All rights reserved.

Characterizing butt-rot fungi on USA-affiliated islands in the western Pacific

Science.gov (United States)

Phil Cannon; Ned B. Klopfenstein; Robert L. Schlub; Mee-Sook Kim; Yuko Ota; Norio Sahashi; Roland J. Quitugua; John W. Hanna; Amy L. Ross-Davis; J. D. Sweeney

2014-01-01

Ganoderma and Phellinus are genera that commonly cause tree butt-rot on USA-affiliated islands of the western Pacific. These fungal genera can be quite prevalent, especially in older mangrove stands. Although the majority of infections caused by these fungi lead to severe rotting of the heartwood, they typically do not directly kill the living tissues of the sapwood,...

Nitrogen fixation in four dryland tree species in central Chile

International Nuclear Information System (INIS)

Ovalle, C.; Arredondo, S.; Aronson, J.; Longeri, L.; Avendano, J.

1998-01-01

Results are presented from a 5-year experiment using 15 N-enriched fertilizer to determine N 2 fixation in four tree species on degraded soils in a Mediterranean-climate region of central Chile in which there are 5 months of drought. Species tested included three slow-growing but long-lived savannah trees native to southers South America, (acacia caven, Prosopic alba and P. chilensis; Mimosoideae), and Tagasaste (Chamaecytisus proliferus ssp. palmensis; Papilonoideae), a fast-growing but medium-lived tree from the Canary Islands. Tagasaste produced four- to twenty-fold more biomass than the other species, but showed declining N 2 fixation and biomass accumulation during the 5th year, corresponding to the juvenile-to-adult developmental transition. Nitrogen content was significantly higher in Tagasaste and Acacia caven than in the other species. The data revealed inter-specific differences in resource allocation and phenology of N 2 fixation rarely detailed for woody plants in dryland regions. (author)

Real time testing of intelligent relays for synchronous distributed generation islanding detection

Science.gov (United States)

Zhuang, Davy

As electric power systems continue to grow to meet ever-increasing energy demand, their security, reliability, and sustainability requirements also become more stringent. The deployment of distributed energy resources (DER), including generation and storage, in conventional passive distribution feeders, gives rise to integration problems involving protection and unintentional islanding. Distributed generators need to be islanded for safety reasons when disconnected or isolated from the main feeder as distributed generator islanding may create hazards to utility and third-party personnel, and possibly damage the distribution system infrastructure, including the distributed generators. This thesis compares several key performance indicators of a newly developed intelligent islanding detection relay, against islanding detection devices currently used by the industry. The intelligent relay employs multivariable analysis and data mining methods to arrive at decision trees that contain both the protection handles and the settings. A test methodology is developed to assess the performance of these intelligent relays on a real time simulation environment using a generic model based on a real-life distribution feeder. The methodology demonstrates the applicability and potential advantages of the intelligent relay, by running a large number of tests, reflecting a multitude of system operating conditions. The testing indicates that the intelligent relay often outperforms frequency, voltage and rate of change of frequency relays currently used for islanding detection, while respecting the islanding detection time constraints imposed by standing distributed generator interconnection guidelines.

Oxygen and Hydrogen Stable Isotope Composition of Eocene ( ~45 million year old) Fossil Tree Cellulose

Science.gov (United States)

Jahren, H.

2001-05-01

I report on \\delta18O and \\deltaD values gained from unusually old tree fossils, collected on Axel Heiberg Island of the Canadian High Arctic. A variety of workers have measured the δ ^{18}O value of cellulose and the δ D value of cellulose nitrate isolated from modern trees and compared it to various environmental parameters (esp. Epstein et al., 1977: 14 tree species sampled at 16 sites ranging from 18 \\deg to 62 \\deg North latitude; \\delta18O of cellulose ranged from +20 to +33 \\permil; \\deltaD of cellulose nitrate ranged from -181 to +18). To date the paleoenvironmental interpretations resulting from these studies have been restricted to application in recent and Quaternary earth history due to the lack of sufficiently preserved cellulose and tree ring structure in older tree fossils. An exception to this generalization are the middle Eocene (\\sim45 my old) fossil forests of Axel Heiberg Island, which contain abundant stumps, branches, twigs, cones and leaves of Metasequoia trees in exquisite preservational condition. These deciduous trees grew at a paleolatitude of 80 ° North, and endured prolonged periods of continuous daylight in the summer and continuous darkness in the winter, making the ecosystem completely unlike any forest community existing today. Fossil wood samples from the site have been slightly compressed, but otherwise exhibit minimal alteration: %C and % cellulose (by mass) are similar to modern Metasequoia wood. δ ^{18}O analyses on cellulose isolated from 14 fossil individuals has yielded the following results: range = +17 to +20 ‰ ; mean = +19 ‰ ; variability within an individual = 0.5 to 1.0 ‰ . In presentation, I will complement these results with δ D determinations on cellulose nitrate isolated from the same individuals, as well as from small plants presently growing in the arctic. I will also discuss the surprising result that Axel Heiberg fossil trees appear to have stable isotope composition as low or lower than trees

The effects of urban warming on herbivore abundance and street tree condition.

Directory of Open Access Journals (Sweden)

Adam G Dale

Full Text Available Trees are essential to urban habitats because they provide services that benefit the environment and improve human health. Unfortunately, urban trees often have more herbivorous insect pests than rural trees but the mechanisms and consequences of these infestations are not well documented. Here, we examine how temperature affects the abundance of a scale insect, Melanaspis tenebricosa (Comstock (Hemiptera: Diaspididae, on one of the most commonly planted street trees in the eastern U.S. Next, we examine how both pest abundance and temperature are associated with water stress, growth, and condition of 26 urban street trees. Although trees in the warmest urban sites grew the most, they were more water stressed and in worse condition than trees in cooler sites. Our analyses indicate that visible declines in tree condition were best explained by scale-insect infestation rather than temperature. To test the broader relevance of these results, we extend our analysis to a database of more than 2700 Raleigh, US street trees. Plotting these trees on a Landsat thermal image of Raleigh, we found that warmer sites had over 70% more trees in poor condition than those in cooler sites. Our results support previous studies linking warmer urban habitats to greater pest abundance and extend this association to show its effect on street tree condition. Our results suggest that street tree condition and ecosystem services may decline as urban expansion and global warming exacerbate the urban heat island effect. Although our non-probability sampling method limits our scope of inference, our results present a gloomy outlook for urban forests and emphasize the need for management tools. Existing urban tree inventories and thermal maps could be used to identify species that would be most suitable for urban conditions.

Density of the tegu lizard (Tupinambis merianae) and its role as nest predator at Anchieta Island, Brazil

OpenAIRE

Bovendorp, Ricardo S.; Alvarez, Ariane D.; Gialetti, Mauro

2008-01-01

Mammals has been pointed out to be the main nest predators in islands, but recent studies has shown that tree snakes are also important nest predator in tropical forests. Here we present information on the density tegu lizards Tupinambis merianae and its role as nest predator at Anchieta Island, Ubatuba, in southeastern Brazil. The mean density of tegu lizards wets estimated to be 83 individuals/km2, which is 1.83 times lower than other well-known population (Fernando de Noronha Archipelago)....

Defining historical baselines for conservation: ecological changes since European settlement on Vancouver Island, Canada.

Science.gov (United States)

Bjorkman, Anne D; Vellend, Mark

2010-12-01

Conservation and restoration goals are often defined by historical baseline conditions that occurred prior to a particular period of human disturbance, such as European settlement in North America. Nevertheless, if ecosystems were heavily influenced by native peoples prior to European settlement, conservation efforts may require active management rather than simple removal of or reductions in recent forms of disturbance. We used pre-European settlement land survey records (1859-1874) and contemporary vegetation surveys to assess changes over the past 150 years in tree species and habitat composition, forest density, and tree size structure on southern Vancouver Island and Saltspring Island, British Columbia, Canada. Several lines of evidence support the hypothesis that frequent historical burning by native peoples, and subsequent fire suppression, have played dominant roles in shaping this landscape. First, the relative frequency of fire-sensitive species (e.g., cedar [Thuja plicata]) has increased, whereas fire-tolerant species (e.g., Douglas-fir [Pseudotsuga menziesii]) have decreased. Tree density has increased 2-fold, and the proportion of the landscape in forest has greatly increased at the expense of open habitats (plains, savannas), which today contain most of the region's threatened species. Finally, the frequency distribution of tree size has shifted from unimodal to monotonically decreasing, which suggests removal of an important barrier to tree recruitment. In addition, although most of the open habitats are associated with Garry oak (Quercus garryana) at present, most of the open habitats prior to European settlement were associated with Douglas-fir, which suggests that the current focus on Garry oak as a flagship for the many rare species in savannas may be misguided. Overall, our results indicate that the maintenance and restoration of open habitats will require active management and that historical records can provide critical guidance to such

Native trees show conservative water use relative to invasive trees: results from a removal experiment in a Hawaiian wet forest.

Science.gov (United States)

Cavaleri, Molly A; Ostertag, Rebecca; Cordell, Susan; Sack, Lawren

2014-01-01

While the supply of freshwater is expected to decline in many regions in the coming decades, invasive plant species, often 'high water spenders', are greatly expanding their ranges worldwide. In this study, we quantified the ecohydrological differences between native and invasive trees and also the effects of woody invasive removal on plot-level water use in a heavily invaded mono-dominant lowland wet tropical forest on the Island of Hawaii. We measured transpiration rates of co-occurring native and invasive tree species with and without woody invasive removal treatments. Twenty native Metrosideros polymorpha and 10 trees each of three invasive species, Cecropia obtusifolia, Macaranga mappa and Melastoma septemnervium, were instrumented with heat-dissipation sap-flux probes in four 100 m(2) plots (two invaded, two removal) for 10 months. In the invaded plots, where both natives and invasives were present, Metrosideros had the lowest sap-flow rates per unit sapwood, but the highest sap-flow rates per whole tree, owing to its larger mean diameter than the invasive trees. Stand-level water use within the removal plots was half that of the invaded plots, even though the removal of invasives caused a small but significant increase in compensatory water use by the remaining native trees. By investigating the effects of invasive species on ecohydrology and comparing native vs. invasive physiological traits, we not only gain understanding about the functioning of invasive species, but we also highlight potential water-conservation strategies for heavily invaded mono-dominant tropical forests worldwide. Native-dominated forests free of invasive species can be conservative in overall water use, providing a strong rationale for the control of invasive species and preservation of native-dominated stands.

Ant species accumulation on Lord Howe Island highlights the increasing need for effective biosecurity on islands

Directory of Open Access Journals (Sweden)

Benjamin D. Hoffmann

2017-04-01

Full Text Available Two species of the genus Fallopia (F. sachalinensis, F. japonica, Polygonaceae native to Asia, and their hybrid (F. × bohemica, belong to the most noxious plant invaders in Europe. They impact highly on invaded plant communities, resulting in extremely poor native species richness. The low number of native species in invaded communities points to the possible existence of mechanisms suppressing their germination. In this study we assessed, under laboratory conditions, whether there are phytotoxic effects of the three Fallopia congeners on seed germination of three target species: two native species commonly growing in habitats that are often invaded by Fallopia taxa (Urtica dioica, Calamagrostis epigejos, and Lepidium sativum, a species commonly used in allelopathic bioassays as a control. Since Fallopia taxa form dense stands with high cover, we included varying light conditions as an additional factor, to simulate the effects of shading by leaf canopy on germination.

HOSPITALITY ENGLISH FOR SPA THERAPISTS IN BANYAN TREE HOTELS AND RESORTS

Directory of Open Access Journals (Sweden)

Ratnasari Nugraheni

2018-04-01

Full Text Available This study is a preliminary study of research and design for hospitality English for SPA therapist in Banyan Tree Hotels and Resorts at Bintan Island. The purpose of this study is to help the English teacher to provide a successful English training since a good English proficiency used in the hospitality industry is obliged, especially for an-international-five-star-hotel-brand. The nature of the study is qualitative using R&D approach. Since this is only a preliminary study, need analysis becomes the primary focus. The data were collected through interview and observation. The participants were people who are working in SPA department in Banyan Tree Bintan, such as SPA trainer, SPA therapist, and SPA manager.

Functional traits of trees on and off termite mounds : Understanding the origin of biotically-driven heterogeneity in savannas

NARCIS (Netherlands)

van der Plas, F.; Howison, R.; Reinders, J.; Fokkema, W.; Olff, H.

Questions In African savannas, Macrotermes termites contribute to small-scale heterogeneity by constructing large mounds. Operating as islands of high nutrient and water availability and low fire frequency, these mounds support distinct, diverse communities of trees that have been shown to be highly

Categorizing ideas about trees: a tree of trees.

Science.gov (United States)

Fisler, Marie; Lecointre, Guillaume

2013-01-01

The aim of this study is to explore whether matrices and MP trees used to produce systematic categories of organisms could be useful to produce categories of ideas in history of science. We study the history of the use of trees in systematics to represent the diversity of life from 1766 to 1991. We apply to those ideas a method inspired from coding homologous parts of organisms. We discretize conceptual parts of ideas, writings and drawings about trees contained in 41 main writings; we detect shared parts among authors and code them into a 91-characters matrix and use a tree representation to show who shares what with whom. In other words, we propose a hierarchical representation of the shared ideas about trees among authors: this produces a "tree of trees." Then, we categorize schools of tree-representations. Classical schools like "cladists" and "pheneticists" are recovered but others are not: "gradists" are separated into two blocks, one of them being called here "grade theoreticians." We propose new interesting categories like the "buffonian school," the "metaphoricians," and those using "strictly genealogical classifications." We consider that networks are not useful to represent shared ideas at the present step of the study. A cladogram is made for showing who is sharing what with whom, but also heterobathmy and homoplasy of characters. The present cladogram is not modelling processes of transmission of ideas about trees, and here it is mostly used to test for proximity of ideas of the same age and for categorization.

Substitution of pig feed preparation using firewood with biogas in Samosir Island: transforming an environmental catastrophe into environmental, social, economic benefits

Science.gov (United States)

Ginting, N.

2018-02-01

In Samosir Island, Indonesia pigs care was not environmentally friendly as people were used firewood in pig feed preparation. A series of research has been conducted from March until September 2017 which was preceded by survey. It was found that people cut tree for firewood. As Samosir Island was under Toba Go Green Project which was a tree planting project so feed pig preparation was in contrast to the project. More over, Indonesia has been committed to reduce its green house gases (GHG) by 26% in 2020, any mitigation on GHG was strongly recommended. One way of mitigation in Samosir was by installing biogas for pig feed preparation. 5 biodigesters 500 liters capacity each were installed in Parbaba Village, Samosir Island and biodigester input were pig manure, water hyacinth. Research design was Randomized Completely Design. Parameters were gas production, pH, temperature and C/N ratio. Biogas than used to cook feed pig. It was known that to cook for 5 finisher pigs, 3 kg firewood could be substituted by 250 liters of biogas.

Assessment of Urban Heat Islands in Small- and Mid-Sized Cities in Brazil

Directory of Open Access Journals (Sweden)

Renata dos Santos Cardoso

2017-02-01

Full Text Available Urban heat islands (UHIs in large cities and different climatic regions have been thoroughly studied; however, their effects are becoming a common concern in smaller cities as well. We assessed UHIs in three tropical cities, analyzing how synoptic conditions, urban morphology, and land cover affect the heat island magnitude. Data gathering involved mobile surveys across Paranavaí (Paraná, Rancharia (São Paulo, and Presidente Prudente (São Paulo, Brazil, during summer evenings (December 2013–January 2014. Temperature data collected over five days in each city point to heat islands with magnitudes up to 6 °C, under calm synoptic conditions, whereas summer average UHI magnitudes peak at 3.7 °C. In addition, UHI magnitudes were higher in areas with closely spaced buildings and few or no trees and building materials that are not appropriate for the region’s climate and thermal comfort.

[Edge effect of the plant community structure on land-bridge islands in the Thousand Island Lake].

Science.gov (United States)

Su, Xiao-Fei; Yuan, Jin-Feng; Hu, Guang; Xu, Gao-Fu; Yu, Ming-Jian

2014-01-01

The research was conducted on 29 land-bridge islands in the Thousand Island Lake (TIL), where long-term monitoring plots were set up during 2009-2010. The community attributes including species richness, Shannon index, plant mean height, plant mean diameter at breast height (DBH) and plant density along the edge-interior gradient from edge to interior forest were calculated to investigate the edge effect. The results showed that the species richness and Shannon index were affected through the whole gradient (larger than 50 m), while the range of edge effect was 20-30 m on mean plant height, and 10 m on plant density and mean DBH. Community attributes differed significantly among the edge gradients. The species richness and Shannon index peaked at the intermediate edge gradient. Plant density decreased and plant mean height increased along the edge to interior gradient. All five community attributes were significantly associated with the edge gradient, also different functional groups, evergreen or deciduous species, trees or shrubs, shade tolerant or shade intolerant species, were differentially influenced by the edge effect. It was demonstrated the influence of edge effect on the fragmented forest community varied with community attributes and functional groups.

Tree mortality in response to typhoon-induced floods and mudslides is determined by tree species, size, and position in a riparian Formosan gum forest in subtropical Taiwan

Science.gov (United States)

Tzeng, Hsy-Yu; Wang, Wei; Tseng, Yen-Hsueh; Chiu, Ching-An; Kuo, Chu-Chia

2018-01-01

Global warming-induced extreme climatic changes have increased the frequency of severe typhoons bringing heavy rains; this has considerably affected the stability of the forest ecosystems. Since the Taiwan 921 earthquake occurred in 21 September 1999, the mountain geology of the Island of Taiwan has become unstable and typhoon-induced floods and mudslides have changed the topography and geomorphology of the area; this has further affected the stability and functions of the riparian ecosystem. In this study, the vegetation of the unique Aowanda Formosan gum forest in Central Taiwan was monitored for 3 years after the occurrence of floods and mudslides during 2009–2011. Tree growth and survival, effects of floods and mudslides, and factors influencing tree survival were investigated. We hypothesized that (1) the effects of floods on the survival are significantly different for each tree species; (2) tree diameter at breast height (DBH) affects tree survival–i.e., the larger the DBH, the higher the survival rate; and (3) the relative position of trees affects tree survival after disturbances by floods and mudslides–the farther trees are from the river, the higher is their survival rate. Our results showed that after floods and mudslides, the lifespans of the major tree species varied significantly. Liquidambar formosana displayed the highest flood tolerance, and the trunks of Lagerstoemia subcostata began rooting after disturbances. Multiple regression analysis indicated that factors such as species, DBH, distance from sampled tree to the above boundary of sample plot (far from the riverbank), and distance from the upstream of the river affected the lifespans of trees; the three factors affected each tree species to different degrees. Furthermore, we showed that insect infestation had a critical role in determining tree survival rate. Our 3-year monitoring investigation revealed that severe typhoon-induced floods and mudslides disturbed the riparian vegetation

Tree mortality in response to typhoon-induced floods and mudslides is determined by tree species, size, and position in a riparian Formosan gum forest in subtropical Taiwan.

Science.gov (United States)

Tzeng, Hsy-Yu; Wang, Wei; Tseng, Yen-Hsueh; Chiu, Ching-An; Kuo, Chu-Chia; Tsai, Shang-Te

2018-01-01

Global warming-induced extreme climatic changes have increased the frequency of severe typhoons bringing heavy rains; this has considerably affected the stability of the forest ecosystems. Since the Taiwan 921 earthquake occurred in 21 September 1999, the mountain geology of the Island of Taiwan has become unstable and typhoon-induced floods and mudslides have changed the topography and geomorphology of the area; this has further affected the stability and functions of the riparian ecosystem. In this study, the vegetation of the unique Aowanda Formosan gum forest in Central Taiwan was monitored for 3 years after the occurrence of floods and mudslides during 2009-2011. Tree growth and survival, effects of floods and mudslides, and factors influencing tree survival were investigated. We hypothesized that (1) the effects of floods on the survival are significantly different for each tree species; (2) tree diameter at breast height (DBH) affects tree survival-i.e., the larger the DBH, the higher the survival rate; and (3) the relative position of trees affects tree survival after disturbances by floods and mudslides-the farther trees are from the river, the higher is their survival rate. Our results showed that after floods and mudslides, the lifespans of the major tree species varied significantly. Liquidambar formosana displayed the highest flood tolerance, and the trunks of Lagerstoemia subcostata began rooting after disturbances. Multiple regression analysis indicated that factors such as species, DBH, distance from sampled tree to the above boundary of sample plot (far from the riverbank), and distance from the upstream of the river affected the lifespans of trees; the three factors affected each tree species to different degrees. Furthermore, we showed that insect infestation had a critical role in determining tree survival rate. Our 3-year monitoring investigation revealed that severe typhoon-induced floods and mudslides disturbed the riparian vegetation in the

Study of the thermohygrometric conditions of Juniperus turbinata habitat in the island of El Hierro (Canary Islands)

Science.gov (United States)

Salva-Catarineu, Montserrat; Salvador-Franch, Ferran; López-Bustins, Joan Albert; Padrón-Padrón, Perdro A.; Cortés-Lucas, Amparo

2015-04-01

The biggest population of Juniperus turbinata throughout the Canary Islands is located in the island of El Hierro. The current extent of juniper woodlands is very small compared with the potential distribution due to heavy exploitation for centuries. Nowadays, the recovery of its natural habitat has such a high environmental and scenic interest since this is a protected species in Europe; however, an improved understanding of the environmental factors that help or limit its recovery is indispensable. Under the JUNITUR project the populations of juniper woodlands in El Hierro are being studied, which are subjected to highly different environments. These environments are mainly determined by their altitude and exposure to NE trade winds. The main objective of this study is to compare the thermohygrometric conditions of three juniper woodlands, located at different altitude and orientation in El Hierro, which present different recovery rates. We are currently using air sensor data loggers fixed to tree branches for recording hourly temperature and humidity data in the three study areas. For this preliminary approach, we analyse daily data of two annual cycles (from September 2012 to August 2014). Our first results show similar thermohygrometric annual cycles among the three study areas. The largest differences are detected in winter temperature and summer humidity between the north (to windward) and south (to leeward) faces of the island. The juniper woodland with a highest recovery rate shows the most extreme temperature conditions in both winter and summer seasons. This last juniper woodland is located leeward to trade winds at 996 m a.s.l. In general terms, the results of this research project might contribute to the knowledge of the juniper bioclimatology in the westernmost of the Canary Islands. Key words: bioclimatology, El Hierro, habitat, Juniperus turbinata, protected species

Isolation and characterization of 10 microsatellite loci in Callicarpa subpubescens (Verbenaceae), an endemic species of the Bonin Islands.

Science.gov (United States)

Mori, K; Kaneko, S; Isagi, Y; Murakami, N; Kato, H

2008-11-01

Ten microsatellite loci were isolated and characterized for Callicarpa subpubescens (Verbenaceae), an endemic tree species of the Bonin Islands. The observed number of alleles at each locus ranged from two to eight with an average of 4.9, and the expected heterozygosity ranged from 0.238 to 0.690 with an average of 0.483. All 10 loci were screened in cross-amplification tests for two other endemic Callicarpa species that also inhabit the Bonin Islands. All loci were successfully amplified in these species. © 2008 The Authors. Journal compilation © 2008 Blackwell Publishing Ltd.

Comparison of T-Square, Point Centered Quarter, and N-Tree Sampling Methods in Pittosporum undulatum Invaded Woodlands

Directory of Open Access Journals (Sweden)

Lurdes Borges Silva

2017-01-01

Full Text Available Tree density is an important parameter affecting ecosystems functions and management decisions, while tree distribution patterns affect sampling design. Pittosporum undulatum stands in the Azores are being targeted with a biomass valorization program, for which efficient tree density estimators are required. We compared T-Square sampling, Point Centered Quarter Method (PCQM, and N-tree sampling with benchmark quadrat (QD sampling in six 900 m2 plots established at P. undulatum stands in São Miguel Island. A total of 15 estimators were tested using a data resampling approach. The estimated density range (344–5056 trees/ha was found to agree with previous studies using PCQM only. Although with a tendency to underestimate tree density (in comparison with QD, overall, T-Square sampling appeared to be the most accurate and precise method, followed by PCQM. Tree distribution pattern was found to be slightly aggregated in 4 of the 6 stands. Considering (1 the low level of bias and high precision, (2 the consistency among three estimators, (3 the possibility of use with aggregated patterns, and (4 the possibility of obtaining a larger number of independent tree parameter estimates, we recommend the use of T-Square sampling in P. undulatum stands within the framework of a biomass valorization program.

The East Australian, Tasmantid, and Lord Howe Volcanic Chains: Possible mechanisms behind a trio of hotspot trails

Science.gov (United States)

Kalnins, L. M.; Cohen, B. E.; Fitton, J. G.; Mark, D. F.; Richards, F. D.; Barfod, D. N.

2015-12-01

The east Australian and Tasman Sea region is home to a unique example of intraplate volcanism: three long-lived, sub-parallel volcanic chains spaced only about 500 km apart. Here we present new 40Ar/39Ar results from the centre chain, the Tasmantid Seamounts, and show that the chain is strongly age-progressive, with an excellent correspondence to the age of the continental East Australian Volcanic Chain to the west and to the more limited ages available for the Lord Howe Seamount Chain to the east. Results from the Louisiade Plateau at the northern end of the Tasmantid chain suggest that it is composed of basalts of the correct age to be a large igneous province formed by the impact of the Tasmantid plume head reaching the lithosphere. This record of relative movement between the plate and the magma source over the last 55 Ma shows two clear deflections from the overall linear trend, one at 26--23 Ma, also observed in the continental chain and linked with the Ontong-Java Plateau jamming the South Melanesian subduction zone, and another at 50--43 Ma, beyond the end of the continental record and contemporaneous with the Hawaiian-Emperor bend. How does such a unique trio of volcanic chains form? The clear age progression, long lifespan, and tie to the Louisiade Plateau are classic indicators of deep-seated plumes, but it is difficult to explain how three separate plumes could remain stable for over 30 Ma when separated by little more than the radii of the plume conduits. Here we examine alternative possible explanations for this volcanic pattern, including small plumes rising from a single deep-seated plume pooling at the 660 km discontinuity, a single plume splitting around a subducting slab fragment, and small-scale convection triggered by topography on the lithosphere-asthenosphere boundary.

A symptom based decision tree approach to boiling water reactor emergency operating procedures

International Nuclear Information System (INIS)

Knobel, R.C.

1984-01-01

This paper describes a Decision Tree approach to development of BWR Emergency Operating Procedures for use by operators during emergencies. This approach utilizes the symptom based Emergency Procedure Guidelines approved for implementation by the USNRC. Included in the paper is a discussion of the relative merits of the event based Emergency Operating Procedures currently in use at USBWR plants. The body of the paper is devoted to a discussion of the Decision Tree Approach to Emergency Operating Procedures soon to be implemented at two United States Boiling Water Reactor plants, why this approach solves many of the problems with procedures indentified in the post accident reviews of Three Mile Island procedures, and why only now is this approach both desirable and feasible. The paper discusses how nuclear plant simulators were involved in the development of the Emergency Operating Procedure decision trees, and in the verification and validation of these procedures. (orig./HP)

Meie saarelt Mnemosyne juurde. Saar kui omaelulooline kujund Bernard Kangro loomingus. From Our Island to Mnemosyne. The Island as an Autobiographical Figure in Bernard Kangro’s work

Directory of Open Access Journals (Sweden)

Maarja Hollo

2012-04-01

Full Text Available The aim of this article is to explore how a sense of place informs the autobiographical in the work of Bernard Kangro. In order to establish a wider context for the relationship between the writer in exile, writing, and a sense of place there is a reference to the work and literary views of the German-speaking Jewish poet Paul Celan. The common basis for the comparison of the work of the two writers is their exile status, but they also share an understanding of the interrelationship between language and reality, a distinctive relationship with places and a sense of place as well as religiousness in their work. The current article focuses on the depiction of places and a sense of place, and its associations with exile as a state of mind that heightens the sensitivity to the real places experienced in the past as well as the imaginary places experienced in the present. In the description of places and a sense of place the autobiographical element occurs on two levels. Firstly, an autobiographical reading is made possible by the proper names in the text that signify real geographical places, which allow for a positivist interpretation with regard to the author’s biography. Secondly, the autobiographical may be revealed through certain figures in Kangro’s work, which are repeated from work to work but whose meaning might be diametrically opposite. Such recurrent figures are, for example, those of the island, the sea, the land, the tree, fog, snow, the wind, the bog, the sky, and the star. The present article addresses the figure of the island and the shifting scale of meanings it creates in Kangro’s work. An approach to the autobiographical via textual tropes is based on Paul de Man’s consideration of autobiography, who was against defining autobiography as a genre or a mode but viewed it instead as “a figure of reading or of understanding that can occur in all texts”. In Kangro’s texts three kinds of islands are found: islands

Suppression of greasy spot disease caused by Mycosphaerella citri Whiteside on grapefruit trees in an organic orchard using an aqueous organic mixture of composted cornmeal, humic acid, molasses, and fish oil vs vegetable oil

Science.gov (United States)

Greasy spot disease of citrus, caused by the fungus Mycosphaerella citri Whiteside, afflicts citrus trees in all citrus-growing areas of the United States, eastern Mexico, Central America, and the Caribbean islands, causing premature defoliation, blemished fruit, and reduced tree vigor, yield, and f...

Variability of morphometric caracteristics of one-year seedlings of different half-sib European White Elm (Ulmus effusa Wild. from the Great War Island

Directory of Open Access Journals (Sweden)

Devetaković, J.

2013-12-01

Full Text Available European White Elm is recognized as a rare and endangered species in the forest fund of the Republic of Serbia. During the past century massive drying of elms occurred and the indications of their extinction appeared, which consequently led to a reduction in genetic diversity and the danger of genetic drift. In the area of the Great War Island near Belgrade we found 56 trees of European White Elm that are spatially divided into three subpopulations. In order to assess the genetic potential of European White Elm in the Great War Island and to define adequate conservation measures variability of 14 selected test trees progeny was rated. Results shows that the satisfactory variability within the popoulation exists, which is a good basis for the conservation of genepool available.

Near-ground cooling efficacies of trees and high-albedo surfaces

Energy Technology Data Exchange (ETDEWEB)

Levinson, Ronnen Michael [Univ. of California, Berkeley, CA (United States)

1997-05-01

Daytime summer urban heat islands arise when the prevalence of dark-colored surfaces and lack of vegetation make a city warmer than neighboring countryside. Two frequentlyproposed summer heat island mitigation measures are to plant trees and to increase the albedo (solar reflectivity) of ground surfaces. This dissertation examines the effects of these measures on the surface temperature of an object near the ground, and on solar heating of air near the ground. Near-ground objects include people, vehicles, and buildings. The variation of the surface temperature of a near-ground object with ground albedo indicates that a rise in ground albedo will cool a near-ground object only if the object’s albedo exceeds a critical value. This critical value of object albedo depends on wind speed, object geometry, and the height of the atmospheric thermal boundary layer. It ranges from 0.15 to 0.37 for a person. If an object has typical albedo of 0.3, increasing the ground albedo by 0.25 perturbs the object’s surface temperature by -1 to +2 K. Comparing a tree’s canopy-to-air convection to the reduction in ground-to-air convection induced by tree shading of the ground indicates that the presence of a tree can either increase or decrease solar heating of ground-level air. The tree’s net effect depends on the extent to which solar heating of the canopy is dissipated by evaporation, and on the fraction of air heated by the canopy that flows downward and mixes with the ground-level air. A two-month lysimeter (plant-weighing) experiment was conducted to measure instantaneous rates of water loss from a tree under various conditions of weather and soil-moisture. Calculations of canopy-to-air convection and the reduction of ground-to-air convection based on this data indicate that canopy-induced heating would negate shadowinduced cooling if approximately 45% of the canopy-heated air mixed with ground level air. This critical fraction is comparable to typical downward mixing

Assessing the use of forest islands by parrot species in a neotropical savanna

Directory of Open Access Journals (Sweden)

Igor Berkunsky

2015-06-01

Full Text Available Understanding the effect of habitat fragmentation is a fundamental yet complicated aim of many ecological studies. Beni savanna is a naturally fragmented forest habitat, where forest islands exhibit variation in resources and threats. To understand how the availability of resources and threats affect the use of forest islands by parrots, we applied occupancy modeling to quantify use and detection probabilities for 12 parrot species on 60 forest islands. The presence of urucuri (Attalea phalerata and macaw (Acrocomia aculeata palms, the number of tree cavities on the islands, and the presence of selective logging,and fire were included as covariates associated with availability of resources and threats. The model-selection analysis indicated that both resources and threats variables explained the use of forest islands by parrots. For most species, the best models confirmed predictions. The number of cavities was positively associated with use of forest islands by 11 species. The area of the island and the presence of macaw palm showed a positive association with the probability of use by seven and five species, respectively, while selective logging and fire showed a negative association with five and six species, respectively. The Blue-throated Macaw (Ara glaucogularis, the critically endangered parrot species endemic to our study area, was the only species that showed a negative association with both threats. Monitoring continues to be essential to evaluate conservation and management actions of parrot populations. Understanding of how species are using this natural fragmented habitat will help determine which fragments should be preserved and which conservation actions are needed.

In and out of Madagascar: dispersal to peripheral islands, insular speciation and diversification of Indian Ocean daisy trees (Psiadia, Asteraceae.

Directory of Open Access Journals (Sweden)

Joeri S Strijk

Full Text Available Madagascar is surrounded by archipelagos varying widely in origin, age and structure. Although small and geologically young, these archipelagos have accumulated disproportionate numbers of unique lineages in comparison to Madagascar, highlighting the role of waif-dispersal and rapid in situ diversification processes in generating endemic biodiversity. We reconstruct the evolutionary and biogeographical history of the genus Psiadia (Asteraceae, a plant genus with near equal numbers of species in Madagascar and surrounding islands. Analyzing patterns and processes of diversification, we explain species accumulation on peripheral islands and aim to offer new insights on the origin and potential causes for diversification in the Madagascar and Indian Ocean Islands biodiversity hotspot. Our results provide support for an African origin of the group, with strong support for non-monophyly. Colonization of the Mascarenes took place by two evolutionary distinct lineages from Madagascar, via two independent dispersal events, each unique for their spatial and temporal properties. Significant shifts in diversification rate followed regional expansion, resulting in co-occurring and phenotypically convergent species on high-elevation volcanic slopes. Like other endemic island lineages, Psiadia have been highly successful in dispersing to and radiating on isolated oceanic islands, typified by high habitat diversity and dynamic ecosystems fuelled by continued geological activity. Results stress the important biogeographical role for Rodrigues in serving as an outlying stepping stone from which regional colonization took place. We discuss how isolated volcanic islands contribute to regional diversity by generating substantial numbers of endemic species on short temporal scales. Factors pertaining to the mode and tempo of archipelago formation and its geographical isolation strongly govern evolutionary pathways available for species diversification, and the

In and out of Madagascar: Dispersal to Peripheral Islands, Insular Speciation and Diversification of Indian Ocean Daisy Trees (Psiadia, Asteraceae)

Science.gov (United States)

Strijk, Joeri S.; Noyes, Richard D.; Strasberg, Dominique; Cruaud, Corinne; Gavory, Fredéric; Chase, Mark W.; Abbott, Richard J.; Thébaud, Christophe

2012-01-01

Madagascar is surrounded by archipelagos varying widely in origin, age and structure. Although small and geologically young, these archipelagos have accumulated disproportionate numbers of unique lineages in comparison to Madagascar, highlighting the role of waif-dispersal and rapid in situ diversification processes in generating endemic biodiversity. We reconstruct the evolutionary and biogeographical history of the genus Psiadia (Asteraceae), a plant genus with near equal numbers of species in Madagascar and surrounding islands. Analyzing patterns and processes of diversification, we explain species accumulation on peripheral islands and aim to offer new insights on the origin and potential causes for diversification in the Madagascar and Indian Ocean Islands biodiversity hotspot. Our results provide support for an African origin of the group, with strong support for non-monophyly. Colonization of the Mascarenes took place by two evolutionary distinct lineages from Madagascar, via two independent dispersal events, each unique for their spatial and temporal properties. Significant shifts in diversification rate followed regional expansion, resulting in co-occurring and phenotypically convergent species on high-elevation volcanic slopes. Like other endemic island lineages, Psiadia have been highly successful in dispersing to and radiating on isolated oceanic islands, typified by high habitat diversity and dynamic ecosystems fuelled by continued geological activity. Results stress the important biogeographical role for Rodrigues in serving as an outlying stepping stone from which regional colonization took place. We discuss how isolated volcanic islands contribute to regional diversity by generating substantial numbers of endemic species on short temporal scales. Factors pertaining to the mode and tempo of archipelago formation and its geographical isolation strongly govern evolutionary pathways available for species diversification, and the potential for successful

Prevention, early detection and containment of invasive, nonnative plants in the Hawaiian Islands: current efforts and needs

Science.gov (United States)

Christoph Kueffer,; Loope, Lloyd

2009-01-01

Introduction: Invasive, non-native plants (or environmental weeds) have long been recognized as a major threat to the native biodiversity of oceanic islands (Cronk & Fuller, 1995; Denslow, 2003). Globally, several hundred non-native plant species have been reported to have major impacts on natural areas on oceanic islands (Kueffer et al., 2009). In Hawaii, at least some 50 non-native plant species reach dominance in natural areas (Kueffer et al., 2009) and many of them are known to impact ecosystem processes or biodiversity. One example is the invasive Australian tree fern (Cyathea cooperi), which has been shown to be very efficient at utilizing soil nitrogen and can grow six times as rapidly in height, maintain four times more fronds, and produce significantly more fertile fronds per month than the native Hawaiian endemic tree ferns, Cibotium spp. (Durand & Goldstein, 2001a, b). Additionally, while native tree ferns provide an ideal substrate for epiphytic growth of many understory ferns and flowering plants, the Australian tree fern has the effect of impoverishing the understory and failing to support an abundance of native epiphytes (Medeiros & Loope, 1993). Other notorious examples of invasive plant species problematic for biodiversity and ecosystem processes in Hawaii include miconia (Miconia calvescens), strawberry guava (Psidium cattleianum), albizia (Falcataria moluccana), firetree (Morella faya), clidemia (Clidemia hirta), kahili ginger (Hedychium gardnerianum), and fountain grass (Pennisetum setaceum), to name just a few. Fireweed (Senecio madagascariensis) is a recent example of a seriously problematic invasive species for Hawaii’s agriculture and is damaging certain high-elevations native ecosystems as well.

Examining Influence of Fog and Stratus Clouds on Bishop Pine Water Budgets, Channel Islands, CA

Science.gov (United States)

Fischer, D. T.; Still, C. J.; Williams, A. P.

2004-12-01

We present the first results from a project whose goal is to advance our basic understanding of the role that fog and persistent stratus clouds play in ecological processes in the California Channel Islands. Our work is focused on a population of Bishop Pines (Pinus muricata) on Santa Cruz Island (SCI), the largest, most topographically complex and most biologically diverse island along the California coast. This is the southernmost population (except for an outlier stand near San Vicente, Baja California), and tree growth appears to be water-limited in such a marginal habitat. We hypothesize that persistent fog and low stratus clouds enhance the water balance of these trees via direct water inputs (fog drip and foliar absorption) and reduced solar heating. To assess these possible effects, we have established weather stations and fog and rain collectors throughout the largest Bishop pine stand on SCI. Initial analysis of weather data shows dramatic differences in solar loading over short distances. We present data on the isotopic content (oxygen-18 and hydrogen-2) of water samples collected from winter 2003 to summer 2004. The samples we collected include fogwater, rainfall, water vapor, soil water, leaf and xylem water, and stream water. We also collected and analyzed leaf biomass and soil organic matter samples at periodic intervals for carbon-13 content. These latter data are evaluated in light of extensive leaf-level ecophysiological data collected in the field and as part of a parallel greenhouse study.

Tree compression with top trees

DEFF Research Database (Denmark)

Bille, Philip; Gørtz, Inge Li; Landau, Gad M.

2013-01-01

We introduce a new compression scheme for labeled trees based on top trees [3]. Our compression scheme is the first to simultaneously take advantage of internal repeats in the tree (as opposed to the classical DAG compression that only exploits rooted subtree repeats) while also supporting fast...

Tree compression with top trees

DEFF Research Database (Denmark)

Bille, Philip; Gørtz, Inge Li; Landau, Gad M.

2015-01-01

We introduce a new compression scheme for labeled trees based on top trees. Our compression scheme is the first to simultaneously take advantage of internal repeats in the tree (as opposed to the classical DAG compression that only exploits rooted subtree repeats) while also supporting fast...

Is the endemic Maltese Top-shell Gibbula nivosa extinct?

OpenAIRE

Schembri, Patrick J.; Borg, Joseph A.; Deidun, Alan; Knittweis, Leyla; Mellado Lopez, T.

2007-01-01

The trochid gastropod Gibbula nivosa, endemic to the Maltese Islands, has recently only been found in two Maltese bays, where it occurred on seagrass leaves and under stones at depths of 1-4m. Intensive sampling of Cymodocea nodosa and Posidonia oceanica meadows, sediment and pebbles at depths of 2-12m, carried out in 2000 and 2002, resulted only in empty shells but no live animals, suggesting that the species is extinct from these localities where previously good populations were found. Howe...

Radiation doses for Marshall Islands Atolls affected by U.S. nuclear testing: all exposure pathways, remedial measures, and environmental loss of (137)Cs.

Science.gov (United States)

Robison, William L; Hamilton, Terry F

2010-01-01

Radiation doses calculated for people resettling Bikini Island at Bikini Atoll, Enjebi Island at Enewetak Atoll, Rongelap Island at Rongelap Atoll, and Utrōk Island at Utrōk Atoll are presented. Residence is assumed to begin in 2010. In previous dose assessments it was shown that (137)Cs accounts for about 98% of the total dose for returning residents. About 85 to 90% (depending on the atoll) is via consumption of locally grown foods containing (137)Cs, and about 10 to 15% is due to external exposure from (137)Cs in the soil. These assessments were made using only the radiological half-life of (137)Cs (30.1 y). We have shown since that there is an environmental loss of (137)Cs from soil to groundwater that results in a more rapid loss of (137)Cs from the atoll ecosystem. The mean effective half-life of (137)Cs at the atolls is 8.5 y. Moreover, treatment of coconut trees with potassium (K) reduces (137)Cs concentration in drinking coconut meat at Bikini Atoll to about 5% of pretreatment concentrations. The magnitude of reduction is dependent on the concentration of (137)Cs in soil, and thereby in food crops, and is less for Enjebi and Rongelap Islands than for Bikini Island. Treatment of food crops and fruit trees with K and removal of the top 15 cm of soil around houses and community buildings prior to construction to reduce external exposure where people spend most of their time has been presented to the communities as a "Combined Option" remediation strategy. Doses presented here are calculated using the Combined Option, effective half-life of (137)Cs at the atolls, and a diet of both imported and local foods. The average natural background dose in the Marshall Islands, plus the anthropogenic nuclear test-related dose at Bikini, Enjebi, and Rongelap Islands, is less for each of the islands than the average background dose in the U.S. and Europe.

Using Remote Sensing Data and Research Results for Urban Heat Island Mitigation

Science.gov (United States)

Estes, Maury; Luvall, Jeffrey

1999-01-01

This paper provides information on the characteristics of the urban heat island, research designed to provide the data needed to develop effective urban heat island reduction strategies, and the development of local working groups to develop implementation plans. As background, an overview of research results on the urban heat island phenomenon and the resultant effect on energy usage and air quality will be explored. The use of more reflective roofing materials, paving materials, tree planting, and other initiatives will be explored as a basis for strategies to mitigate urban heat islands and improve the urban environment. Current efforts to use aircraft remote sensing data in Atlanta, Baton Rouge, Sacramento, and Salt Lake City and our work with non-profit organizations designated to lead public education and strategic development efforts will be presented. Efforts to organize working groups comprised of key stakeholders, the process followed in communicating research results, and methodology for soliciting feedback and incorporating ideas into local plans, policies and decision-making will be discussed. Challenges in developing and transferring data products and research results to stakeholders will be presented. It is our ultimate goal that such efforts be integrated into plans and/or decision models that encourage sustainable development.

Biogeographical diversity of leaf-associated microbial communities from salt-secreting Tamarix trees of the Dead Sea region.

Science.gov (United States)

Qvit-Raz, Noga; Finkel, Omri M; Al-Deeb, Taghleb M; Malkawi, Hanan I; Hindiyeh, Muna Y; Jurkevitch, Edouard; Belkin, Shimshon

2012-02-01

The leaves of Tamarix, a salt-secreting desert tree, form an extreme niche that harbors a unique microbial community. In view of the global distribution of this tree, its island-like phyllosphere is highly suitable for studying microbial diversity along geographical gradients. Here we present an analysis of microbial community diversity using leaf surface samples collected at six different sites, on both sides of the Dead Sea, over a period of one year. Biodiversity analysis of denaturing gradient gel electrophoresis (DGGE) patterns of the bacterial 16S rRNA gene revealed a significant degree of bacterial community similarity within trees sampled at the same site, much higher than the similarity between trees from different geographical locations. Statistical analysis indicated that the degree of similarity was negatively correlated with the distance between sampling sites, and that a weak correlation existed between diversity and leaf pH. Copyright © 2011 Institut Pasteur. Published by Elsevier Masson SAS. All rights reserved.

Urban surface temperature behaviour and heat island effect in a tropical planned city

Science.gov (United States)

Ahmed, Adeb Qaid; Ossen, Dilshan Remaz; Jamei, Elmira; Manaf, Norhashima Abd; Said, Ismail; Ahmad, Mohd Hamdan

2015-02-01

Putrajaya is a model city planned with concepts of a "city in the garden" and an "intelligent city" in the tropics. This study presents the behaviour of the surface temperature and the heat island effect of Putrajaya. Findings show that heat island intensity is 2 °C on average at nighttime and negligible at daytime. But high surface temperature values were recorded at the main boulevard due to direct solar radiation incident, street orientation in the direction of northeast and southwest and low building height-to-street width ratio. Buildings facing each other had cooling effect on surfaces during the morning and evening hours; conversely, they had a warming effect at noon. Clustered trees along the street are effective in reducing the surface temperature compared to scattered and isolated trees. Surface temperature of built up areas was highest at noon, while walls and sidewalks facing northwest were hottest later in the day. Walls and sidewalks that face northwest were warmer than those that face southeast. The surface temperatures of the horizontal street surfaces and of vertical façades are at acceptable levels relative to the surface temperature of similar surfaces in mature cities in subtropical, temperate and Mediterranean climates.

Generalising tree traversals and tree transformations to DAGs

DEFF Research Database (Denmark)

Bahr, Patrick; Axelsson, Emil

2017-01-01

We present a recursion scheme based on attribute grammars that can be transparently applied to trees and acyclic graphs. Our recursion scheme allows the programmer to implement a tree traversal or a tree transformation and then apply it to compact graph representations of trees instead. The resul......We present a recursion scheme based on attribute grammars that can be transparently applied to trees and acyclic graphs. Our recursion scheme allows the programmer to implement a tree traversal or a tree transformation and then apply it to compact graph representations of trees instead...... as the complementing theory with a number of examples....

Heat Islands

Science.gov (United States)

EPA's Heat Island Effect Site provides information on heat islands, their impacts, mitigation strategies, related research, a directory of heat island reduction initiatives in U.S. communities, and EPA's Heat Island Reduction Program.

Near-ground cooling efficacies of trees and high-albedo surfaces

Energy Technology Data Exchange (ETDEWEB)

Levinson, Ronnen M. [Univ. of California, Berkeley, CA (United States). Dept. of Mechanical Engineering

1997-05-01

Daytime summer urban heat islands arise when the prevalence of dark-colored surfaces and lack of vegetation make a city warmer than neighboring countryside. Two frequently-proposed summer heat island mitigation measures are to plant trees and to increase the albedo (solar reflectivity) of ground surfaces. This dissertation examines the effects of these measures on the surface temperature of an object near the ground, and on solar heating of air near the ground. Near-ground objects include people, vehicles, and buildings. The variation of the surface temperature of a near-ground object with ground albedo indicates that a rise in ground albedo will cool a near-ground object only if the object`s albedo exceeds a critical value. This critical value of object albedo depends on wind speed, object geometry, and the height of the atmospheric thermal boundary layer. It ranges from 0.15 to 0.37 for a person. If an object has typical albedo of 0.3, increasing the ground albedo by.

Palm trees and islands - Current filaments in the edge of JET

Energy Technology Data Exchange (ETDEWEB)

Maszl, Ch., E-mail: christian.maszl@uibk.ac.at [JET-EFDA, Culham Science Centre, OX14 3DB, Abingdon (United Kingdom); Association EURATOM/OAW, Institute for Ion Physics and Applied Physics, University of Innsbruck (Austria); Naulin, V. [JET-EFDA, Culham Science Centre, OX14 3DB, Abingdon (United Kingdom); Association EURATOM/RISO DTU, Danish Technical University, Roskilde (Denmark); Brix, M. [JET-EFDA, Culham Science Centre, OX14 3DB, Abingdon (United Kingdom); Association EURATOM/CCFE, Culham Science Centre, Abingdon (United Kingdom); Versloot, T.W. [JET-EFDA, Culham Science Centre, OX14 3DB, Abingdon (United Kingdom); Association EURATOM/FOM, FOM Institute Rijnhuizen, Nieuwegein (Netherlands); Schrittwieser, R. [JET-EFDA, Culham Science Centre, OX14 3DB, Abingdon (United Kingdom); Association EURATOM/OAW, Institute for Ion Physics and Applied Physics, University of Innsbruck (Austria)

2011-08-01

It is now well known that edge localized modes (ELMs) lead to the ejection of a number of filamentary structures into the scrape-off layer (SOL). ELMs thus generate structures with excess energy and density. Recent results show that ELM filaments also carry current. Furthermore it can be conjectured that ELM filaments leave corresponding holes behind. If such a hole is able to reach a resonant magnetic surface it may close on itself and thus increase its lifetime significantly, thereby becoming detectable. We presume that the Palm Tree Mode (PTM) is a signature of such an event. Understanding PTMs therefore enhances our knowledge of ELMs and edge physics and contributes to the verification of ELM models.

Quantifying coastal erosion rates using anatomical change in exposed tree roots at Porquerolles Island (Var, France).

Science.gov (United States)

Morel, Pauline; Corona, Christophe; Lopez-Saez, Jérôme; Rovéra, Georges; Dewez, Thomas; Stoffel, Markus; Berger, Frédéric

2017-04-01

Rocky coasts are the most common type of ocean-land contacts and can be found in all types of morphogenetic environments. Most work on rocky environments focused on the impacts of modern sea level rise on cliff stability derived from sequential surveys, direct measurements or erosional features in anthropogenic structures. Studies mainly focused on rapid erosion so that little is known about erosion rates of the French Mediterranean coastal area. Using anatomical reactions in roots, has been successfully used in various environments in the past to quantify continuous denudation rates, mostly in relation with gullying processes (Vandekerckhove, 2001; Malik, 2008), aerial (or sheet) (Bodoque et al., 2005; Lopez Saez et al., 2011; Lucia et al., 2011), river bank (Malik, 2006; Hitz et al., 2008a; Stoffel et al., 2012), or lake shore (Fantucci, 2007) erosion, but never so far on coastal cliffs environment. This study aims at exploring the potential of dendrogeomorphic approach to quantify multidecadal changes in coastal environments on Porquerolles Island (Var, France). We sampled 56 discs from Pinus halepensis Mill. roots on former alluvial deposits eroded by present day sea level (escarpments of a few meter in height) and on sandy-gravelly cliffs. We were able to dates erosion pulses as well as changes in cliff geometry with annual resolution over 30-40 years showing an average erosion rate of 2.1 cm yr-1. Our results are consistent with those found in the study of Giuliano (2015) on Mediterranean coastal environment. This contribution therefore demonstrates that dendrogeomorphic analyses of roots clearly have significant potential and are a powerful tool for the quantification of multidecadal cliff retreats rates in areas where measurements of past erosion is lacking. References: Bodoque J, Díez-Herrero A, Martín-Duque J, Rubiales J, Godfrey A, Pedraza J, Carrasco R, Sanz M. 2005. Sheet erosion rates determined by using dendrogeomorphological analysis of exposed

Surface tree languages and parallel derivation trees

NARCIS (Netherlands)

Engelfriet, Joost

1976-01-01

The surface tree languages obtained by top-down finite state transformation of monadic trees are exactly the frontier-preserving homomorphic images of sets of derivation trees of ETOL systems. The corresponding class of tree transformation languages is therefore equal to the class of ETOL languages.

Island biogeography

DEFF Research Database (Denmark)

Whittaker, Robert James; Fernández-Palacios, José María; Matthews, Thomas J.

2017-01-01

Islands provide classic model biological systems. We review how growing appreciation of geoenvironmental dynamics of marine islands has led to advances in island biogeographic theory accommodating both evolutionary and ecological phenomena. Recognition of distinct island geodynamics permits gener...

Multivariate statistical tools for the radiometric features of volcanic islands

International Nuclear Information System (INIS)

Basile, S.; Brai, M.; Marrale, M.; Micciche, S.; Lanzo, G.; Rizzo, S.

2009-01-01

The Aeolian Islands represents a Quaternary volcanic arc related to the subduction of the Ionian plate beneath the Calabrian Arc. The geochemical variability of the islands has led to a broad spectrum of magma rocks. Volcanic products from calc-alkaline (CA) to calc-alkaline high in potassium (HKCA) are present throughout the Archipelago, but products belonging to shoshonitic (SHO) and potassium (KS) series characterize the southern portion of Lipari, Vulcano and Stromboli. Tectonics also plays an important role in the process of the islands differentiation. In this work, we want to review and cross-analyze the data on Lipari, Stromboli and Vulcano, collected in measurement and sampling campaigns over the last years. Chemical data were obtained by X-ray fluorescence. High resolution gamma-ray spectrometry with germanium detectors was used to measure primordial radionuclide activities. The activity of primordial radionuclides in the volcanic products of these three islands is strongly dependent on their chemism. The highest contents are found in more differentiated products (rhyolites). The CA products have lower concentrations, while the HKCA and Shoshonitic product concentrations are in between. Calculated dose rates have been correlated with the petrochemical features in order to gain further insight in evolution and differentiation of volcanic products. Ratio matching technique and multivariate statistical analyses, such as Principal Component Analysis and Minimum Spanning Tree, have been applied as an additional tool helpful to better describe the lithological affinities of the samples. (Author)

TreePics: visualizing trees with pictures

Directory of Open Access Journals (Sweden)

Nicolas Puillandre

2017-09-01

Full Text Available While many programs are available to edit phylogenetic trees, associating pictures with branch tips in an efficient and automatic way is not an available option. Here, we present TreePics, a standalone software that uses a web browser to visualize phylogenetic trees in Newick format and that associates pictures (typically, pictures of the voucher specimens to the tip of each branch. Pictures are visualized as thumbnails and can be enlarged by a mouse rollover. Further, several pictures can be selected and displayed in a separate window for visual comparison. TreePics works either online or in a full standalone version, where it can display trees with several thousands of pictures (depending on the memory available. We argue that TreePics can be particularly useful in a preliminary stage of research, such as to quickly detect conflicts between a DNA-based phylogenetic tree and morphological variation, that may be due to contamination that needs to be removed prior to final analyses, or the presence of species complexes.

Tenarife Island, Canary Island Archipelago, Atlantic Ocean

Science.gov (United States)

1991-01-01

Tenarife Island is one of the most volcanically active of the Canary Island archipelago, Atlantic Ocean, just off the NW coast of Africa, (28.5N, 16.5W). The old central caldera, nearly filled in by successive volcanic activity culminating in two stratocones. From those two peaks, a line of smaller cinder cones extend to the point of the island. Extensive gullies dissect the west side of the island and some forests still remain on the east side.

Diameter growth performance of tree functional groups in Puerto Rican secondary tropical forests

Directory of Open Access Journals (Sweden)

Patricia Adame

2014-04-01

Full Text Available Aim of study: Understanding the factors that control tree growth in successional stands is particularly important for quantifying the carbon sequestration potential and timber yield of secondary tropical forests. Understanding the factors that control tree growth in successional stands is particularly important for quantifying the carbon sequestration potential and timber yield of secondary tropical forests. Yet, the high species diversity of mixed tropical forests, including many uncommon species, hinders the development of species-specific diameter growth models.Area of study: In these analyses, we grouped 82 species from secondary forests distributed across 93 permanent plots on the island of Puerto Rico.Material and Methods: Species were classified according to regeneration strategy and adult height into six functional groups. This classification allowed us to develop a robust diameter growth model using growth data collected from 1980-1990. We used mixed linear model regression to analyze tree diameter growth as a function of individual tree characteristics, stand structure, functional group and site factors.Main results: The proportion of variance in diameter growth explained by the model was 15.1%, ranging from 7.9 to 21.7%. Diameter at breast height, stem density and functional group were the most important predictors of tree growth in Puerto Rican secondary forest. Site factors such as soil and topography failed to predict diameter growth.Keywords: Caribbean forests; growth model; tropical forest succession; Puerto Rico.

Variability of morphometric characteristics of the leaves of European white elm from the area of Great War Island

Directory of Open Access Journals (Sweden)

Devetaković Jovana

2013-01-01

Full Text Available The European White Elm (Ulmus effusa Willd. is indicated as a rare and endangered species in the growing stock of the Republic of Serbia. In the area of Great War Island, its natural populations were reduced to 56 registered trees, which occur in three spatially isolated subpopulations. On the basis of the research conducted on the level of variability of adaptible morphometric characteristics of leaves from 14 selected test trees of European White Elm, it can be concluded that the degree of interpopulation variability is satisfactory, which is a good basis for the conservation of the available gene pool.

Vertical structure use by the Stout Iguana (Cyclura pinguis) on Guana Island, BVI

Science.gov (United States)

Cheek, Christopher A.; Hlavaty, Shay; Perkins, Rebecca N.; Peyton, Mark A.; Ryan, Caitlin N.; Zavaleta, Jennifer C.; Boal, Clint W.; Perry, Gad

2013-01-01

The Stout Iguana (Cyclura pinguis) is a critically endangered species endemic to the Puerto Rico Bank and currently restricted to the British Virgin Islands (BVI). Our study on Guana Island, BVI, focused on vertical structure use. Based on previous incidental observations, we hypothesized that Stout Iguanas use vertical structures and that adults and juveniles use such structures differently. In October 2011, we documented movement and vertical structure use by adult (n = 4) and juvenile (n = 11) iguanas with tracking bobbins. We recorded structure types used, heights attained on structures, distances between structures, and structure sizes. We found that Stout Iguanas used vertical structure more than previously documented. Trees comprised a significantly greater (P Iguanas. Habitat management that provides vertical structure may be advantageous for the conservation of this species.

Akit’s house: identification of vernacular coastal architecture in Meranti Island

Science.gov (United States)

Faisal, G.; Amanati, R.

2018-03-01

Akit people can be found on Meranti islands near east coast Sumatra. Their houses made mainly by wood construction as stilt type house. The roof of the house was made by leaves, and bark of the tree was used on house wall. Nowadays, some changes have occurred on this vernacular house. The changes are not only as responding to the environment, environment but also are affecting by way of their life. In turn, this changing becomes an interesting phenomenon, particular comparing to the house on other islands. This research has conducted in qualitative research approach to identify how the changes of the house. Field data gathered by a range of methods such as observation, story-telling, and documentation. The data are analyzed and interpreted within an iterative process to expand understanding of the house’s changing. This research offers an architectural insight into how the vernacular houses are changing.

"Healthier than thou? 'Practicing what you preach' backfires by increasing anticipated devaluation": Correction to Howe and Monin (2017).

Science.gov (United States)

2017-05-01

Reports an error in "Healthier Than Thou? "Practicing What You Preach" Backfires by Increasing Anticipated Devaluation" by Lauren C. Howe and Benoît Monin ( Journal of Personality and Social Psychology , Advanced Online Publication, Feb 27, 2017, np). In the article, the beginning phrase of the second paragraph of the Internal Meta-Analysis of Studies 3 Through 5 section is incorrect. It should instead begin as follows: Across the three studies. The Monin et al. (2014) reference in both the References list and in text is included in error. The correct citation should read as follows: Monin, B., & Oppenheimer, D. M. (2014). The limits of direct replications and the virtues of stimulus sampling: Commentary on Klein et al., 2014. Social Psychology , 45, 299-300. (The following abstract of the original article appeared in record 2017-08697-001.) Should experts always practice what they preach? When an expert displays exemplary behavior, individuals who fear negative devaluation sometimes anticipate that this expert will look down on them. As a result, displays of excellence can paradoxically turn off the very people they are trying to inspire. Five studies document this in the medical domain, showing that individuals who are overweight or obese and concerned about their weight avoid physicians who advertise their fitness, for fear that these doctors will judge them negatively. People (erroneously) believe that doctors have healthier habits than other individuals (Study 1), doctors advertise healthy habits (Study 2), and overweight individuals anticipate devaluation from, and thus avoid and feel less comfortable with, doctors who portray themselves as fitness-focused (Study 3). Studies 4 and 5 test strategies for physicians to emphasize their own fitness without turning off weight-sensitive patients. This work demonstrates that it is critical to take into account ego-defensive processes when attempting to lead by example. (PsycINFO Database Record (c) 2017 APA, all

Challenging the Concept of Natural Distributions: Global Change Turns Trees Into Weeds

Science.gov (United States)

Gleadow, R.; O'Leary, B.; Burd, M.

2015-12-01

National parks and nature reserves are set aside to preserve certain ecosystems, reflecting species distributions at a moment in time. Changing climate and fire dynamics can mean that the species most suited to that area are different, leading new tree species to 'invade' the conservation areas. Pittosporum undulatum is an invasive tree native tree species with a natural range from southeast Queensland to Eastern Victoria, Australia. Soon after European settlement this species became a popular ornamental tree in gardens and was planted outside of its natural range across the continent and introduced to the USA (where it is known as Victorian Box), the Hawaiian Islands, Jamaica, southern Africa and the Azores. The reason this is important is because high density of P. undulatum lead to reduced biodiversity and often the complete suppression of regeneration of exiting forest trees. In Australia, changes in fire dynamics have played a major part in its in dominance. New strategies for forest management were proposed by Gleadow an Ashton in the 1980s, but lack of action has led us to predict that the entire Dandenong Ranges, near Melbourne, will be invaded within 25 years resulting in the loss of a major recreational and conservation area. This is a model of the type of problems that can be expected as the climate envelope for species changes in the coming century, challenging the very concept of a "native ".

Cooling and energy saving potentials of shade trees and urban lawns in a desert city

International Nuclear Information System (INIS)

Wang, Zhi-Hua; Zhao, Xiaoxi; Yang, Jiachuan; Song, Jiyun

2016-01-01

Highlights: • We developed a numerical framework incorporating trees in an urban canopy model. • Shade trees have more prominent energy saving potential than urban lawns. • The trade-off between water-energy is a key for urban landscape management. • Urban vegetation can significantly alleviate outdoor thermal stress. - Abstract: The use of urban vegetation in cities is a common landscape planning strategy to alleviate the heat island effect as well as to enhance building energy efficiency. The presence of trees in street canyons can effectively reduce environmental temperature via radiative shading. However, resolving shade trees in urban land surface models presents a major challenge in numerical models, especially in predicting the radiative heat exchange in canyons. In this paper, we develop a new numerical framework by incorporating shade trees into an advanced single-layer urban canopy model. This novel numerical framework is applied to Phoenix metropolitan area to investigate the cooling effect of different urban vegetation types and their potentials in saving building energy. It is found that the cooling effect by shading from trees is more significant than that by evapotranspiration from lawns, leading to a considerable saving of cooling load. In addition, analysis of human thermal comfort shows that urban vegetation plays a crucial role in creating a comfortable living environment, especially for cities located in arid or semi-arid region.

Canary Islands

Science.gov (United States)

1992-01-01

This easterly looking view shows the seven major volcanic islands of the Canary Island chain (28.0N, 16.5W) and offers a unique view of the islands that have become a frequent vacation spot for Europeans. The northwest coastline of Africa, (Morocco and Western Sahara), is visible in the background. Frequently, these islands create an impact on local weather (cloud formations) and ocean currents (island wakes) as seen in this photo.

Construction of man-made island `Hakkeijima` in Yokohama; Keikan wo koryoshita jinkoto no jirei (Yokohama Hakkeijima no seibi)

Energy Technology Data Exchange (ETDEWEB)

Kimura, H. [Yokohama City Office, Yokohama (Japan)

1995-01-01

The present paper introduces Hakkei Island reclaimed and opened in Yokohama for the oceanic recreation. Reproducing the natural shoreline, this man-made island is about 24 ha wide. It is divided into seven zones, inclusive of Open Market and Aquamuseum, with a circular passage connecting these zones and peripheral passage along the shoreline for the pedestrians. Having the altitude of 20m at its center, an also man-made hill forms a green belt with planted trees. As facilities, what is characteristic is the Sea Paradise Tower which is 90m high. Having a form combining two triangular pyramid, the roof of Aquamuseum is built of glass and Teflon-coated glass fiber. For the tree-planting, the following two types of green are separately arranged: `skeletal green` attaching importance to the distant scenery, life living and sea breeze protection. `Decorative green` having the theme related to the facilities. Investment made in the infrastructural construction (with the exception of reclamation) and construction of facilities was about 9 and 50 billion yen, respectively. 4 refs., 6 figs.

Hydrologic Effects and Biogeographic Impacts of Coastal Fog, Channel Islands, California

Science.gov (United States)

Fischer, D. T.; Still, C. J.; Williams, A. P.

2006-12-01

Fog has long been recognized as an important component of the hydrological cycle in many ecosystems, including coastal desert fog belts, tropical cloud forests, and montane areas worldwide. Fog drip can be a major source of water, particularly during the dry season, and there is evidence in some ecosystems of direct fogwater uptake by foliar absorption. Fog and low clouds can also increase availability of water by reducing evaporative water losses. In the California Channel Islands, fog and low stratus clouds dramatically affect the water budget of coastal vegetation, particularly during the long summer drought. This work focuses on a population of Bishop pine (Pinus muricata D. Don) on Santa Cruz Island. This is the southernmost large stand of this species, and tree growth and survival appears to be strongly limited by water availability. We have used parallel measurement and modeling approaches to quantify the importance of fogwater inputs and persistent cloud cover to Bishop pine growth. We have modeled drought stress over the last century based on local climate records, calibrated against a dense network of 12 weather stations on a 7km coastal-inland elevation gradient. Water availability is highly variable year to year, with episodic droughts that are associated with widespread tree mortality. Frequent cloud cover near the coast reduces evapotranspiration relative to the inland site (on the order of 25%), thereby delaying the onset of, and moderating the severity of the annual summer drought. Substantial summer fog drip at higher elevations provides additional water inputs that also reduce drought severity. Beyond the theoretical availability of extra water from fog drip, tree ring analysis and xylem water isotopic data suggest that significant amounts of fog water are actually taken up by these trees. Stand boundaries appear to be driven by spatial patterns of mortality related to water availability and frequency of severe drought. These results suggest that

The effect of urban heat island on Izmir's city ecosystem and climate.

Science.gov (United States)

Corumluoglu, Ozsen; Asri, Ibrahim

2015-03-01

Depending on the researches done on urban landscapes, it is found that the heat island intensity caused by the activities in any city has some impact on the ecosystem of the region and on the regional climate. Urban areas located in arid and semiarid lands somehow represent heat increase when it is compared with the heat in the surrounding rural areas. Thus, cities located amid forested and temperate climate regions show moderate temperatures. The impervious surfaces let the rainfall leave the city lands faster than undeveloped areas. This effect reduces water's cooling effects on these lands. More significantly, if trees and other vegetations are rare in any region, it means less evapotranspiration-the process by which trees "exhale" water. Trees also contribute to the cooling of urban lands by their shade. Land cover and land use maps can easily be produced by processing of remote sensing satellites' images, like processing of Landsat's images. As a result of this process, urban regions can be distinguished from vegetation. Analyzed GIS data produced and supported by these images can be utilized to determine the impact of urban land on energy, water, and carbon balances at the Earth's surface. Here in this study, it is found that remote sensing technique with thermal images is a liable technique to asses where urban heat islands and hot spots are located in cities. As an application area, in Izmir, it was found that the whole city was in high level of surface temperature as it was over 28 °C during the summer times. Beside this, the highest temperature values which go up to 47 °C are obtained at industrial regions especially where the iron-steel factories and the related industrial activities are.

ColorTree: a batch customization tool for phylogenic trees.

Science.gov (United States)

Chen, Wei-Hua; Lercher, Martin J

2009-07-31

Genome sequencing projects and comparative genomics studies typically aim to trace the evolutionary history of large gene sets, often requiring human inspection of hundreds of phylogenetic trees. If trees are checked for compatibility with an explicit null hypothesis (e.g., the monophyly of certain groups), this daunting task is greatly facilitated by an appropriate coloring scheme. In this note, we introduce ColorTree, a simple yet powerful batch customization tool for phylogenic trees. Based on pattern matching rules, ColorTree applies a set of customizations to an input tree file, e.g., coloring labels or branches. The customized trees are saved to an output file, which can then be viewed and further edited by Dendroscope (a freely available tree viewer). ColorTree runs on any Perl installation as a stand-alone command line tool, and its application can thus be easily automated. This way, hundreds of phylogenic trees can be customized for easy visual inspection in a matter of minutes. ColorTree allows efficient and flexible visual customization of large tree sets through the application of a user-supplied configuration file to multiple tree files.

Upper canopy pollinators of Eucryphia cordifolia Cav., a tree of South American temperate rain forest

Directory of Open Access Journals (Sweden)

Cecilia Smith-Ramírez

2016-05-01

Full Text Available Ecological processes in the upper canopy of temperate forests have been seldom studied because of the limited accessibility. Here, we present the results of the first survey of the pollinator assemblage and the frequency of insect visits to flowers in the upper branches of ulmo, Eucryphia cordifolia Cav., an emergent 30-40 m-tall tree in rainforests of Chiloé Island, Chile. We compared these findings with a survey of flower visitors restricted to lower branches of E. cordifolia 1- in the forest understory, 2- in lower branches in an agroforestry area. We found 10 species of pollinators in canopy, and eight, 12 and 15 species in understory, depending of tree locations. The main pollinators of E. cordifolia in the upper canopy differed significantly from the pollinator assemblage recorded in lower tree branches. We conclude that the pollinator assemblages of the temperate forest canopy and interior are still unknown.

Fire history and moisture influences on historical forest age structure in the sky islands of southern Arizona, USA

Science.gov (United States)

Jose M. Iniguez; Thomas W. Swetnam; Christopher H. Baisan

2016-01-01

Aim: The purpose of this study was to examine the influence of moisture and fire on historical ponderosa pine (Pinus ponderosa Dougl. ex Laws.) age structure patterns. Location: We used a natural experiment created over time by the unique desert island geography of southern Arizona. Methods: We sampled tree establishment dates in two sites on Rincon Peak and...

Performance of The Selected Main Tree of Liberoid Coffe in The Peatland of Meranti Island, Riau

Directory of Open Access Journals (Sweden)

Budi Martono

2017-01-01

Full Text Available In order to develop (renewal and extension the Liberoid coffee in peatland, it is necessary to do the program of increasing production and quality of Liberoid coffee. It requires the superior planting materials of superior in specific location. This study has the objective to find out the performance of the selected main trees of Liberoid coffee. The study was conducted from January to September 2015 in the area of peatland in the Kedaburapat village, Rangsang Pesisir District, Kepulauan Meranti Regency, Riau. The method used was the direct observation of main trees of selected Liberoid coffee. The observed character is quantitative and qualitative character. The results showed the diversity of quantitative characters within a range between 7.39 to 40.11%. The average number of pieces / bunch is third with a production of 30.63 kg / tree / year, 288.25 cm plant height, stem diameter 36.88 cm, the number of primary branches of 5.88; the number of secondary branches 12.63, crown width 185.88 cm western, eastern 201.13 cm, 209.25 cm southern and northern 216.75 cm. The diversity of qualitative character is seen in the character of shoot color, old fruit color, fruit shape, fruit discuss, and the upper surface of the leaf.

Woody Vegetation Composition and Structure in Peri-urban Chongming Island, China

Science.gov (United States)

Zhao, Min; Escobedo, Francisco J.; Wang, Ruijing; Zhou, Qiaolan; Lin, Wenpeng; Gao, Jun

2013-05-01

Chongming, the world's largest alluvial island, is located within the municipality of Shanghai, China. Recent projects have now linked peri-urban Chongming to Shanghai's urban core and as a result will soon undergo substantial changes from urbanization. We quantitatively analyzed the structure and composition of woody vegetation across subtropical, peri-urban Chongming as a basis for sustainable management of these rapidly urbanizing subtropical ecosystems elsewhere. We used 178 permanent, random plots to statistically and spatially analyze woody plant composition and tree structure across the 1,041 km2 of Chongming. A total of 2,251 woody plants were measured comprising 42 species in 37 genera. We statistically and geospatially analyzed field data according to land uses and modeled air pollution removal by trees. Average tree diameter at breast height, total height, and crown widths on transportation land uses were greater than other land uses. These same values were lowest on forest land use and greater tree cover was associated with areas of increased anthropogenic activity. Less than 20 % of the woody vegetation was exotic and a species richness index was significantly different between land uses due to legacy effects. Composition of agriculture and forest land uses were similar to residential and transportation. Tree cover across Chongming was also estimated to annually remove 1,400 tons of air pollutants. We propose that this integrated and quantitative method can be used in other subtropical, peri-urban areas in developing countries to establish baseline trends for future sustainability objectives and to monitor the effects of urbanization and climate change.

Tree Colors: Color Schemes for Tree-Structured Data.

Science.gov (United States)

Tennekes, Martijn; de Jonge, Edwin

2014-12-01

We present a method to map tree structures to colors from the Hue-Chroma-Luminance color model, which is known for its well balanced perceptual properties. The Tree Colors method can be tuned with several parameters, whose effect on the resulting color schemes is discussed in detail. We provide a free and open source implementation with sensible parameter defaults. Categorical data are very common in statistical graphics, and often these categories form a classification tree. We evaluate applying Tree Colors to tree structured data with a survey on a large group of users from a national statistical institute. Our user study suggests that Tree Colors are useful, not only for improving node-link diagrams, but also for unveiling tree structure in non-hierarchical visualizations.

Snakes on the Balearic islands: an invasion tale with implications for native biodiversity conservation.

Science.gov (United States)

Silva-Rocha, Iolanda; Salvi, Daniele; Sillero, Neftalí; Mateo, Jose A; Carretero, Miguel A

2015-01-01

Biological invasions are a major conservation threat for biodiversity worldwide. Islands are particularly vulnerable to invasive species, especially Mediterranean islands which have suffered human pressure since ancient times. In the Balearic archipelago, reptiles represent an outstanding case with more alien than native species. Moreover, in the last decade a new wave of alien snakes landed in the main islands of the archipelago, some of which were originally snake-free. The identification of the origin and colonization pathways of alien species, as well as the prediction of their expansion, is crucial to develop effective conservation strategies. In this study, we used molecular markers to assess the allochthonous status and the putative origin of the four introduced snake species (Hemorrhois hippocrepis, Malpolon monspessulanus, Macroprotodon mauritanicus and Rhinechis scalaris) as well as ecological niche models to infer their patterns of invasion and expansion based on current and future habitat suitability. For most species, DNA sequence data suggested the Iberian Peninsula as the potential origin of the allochthonous populations, although the shallow phylogeographic structure of these species prevented the identification of a restricted source-area. For all of them, the ecological niche models showed a current low habitat suitability in the Balearic, which is however predicted to increase significantly in the next few decades under climate change scenarios. Evidence from direct observations and spatial distribution of the first-occurrence records of alien snakes (but also lizards and worm lizards) suggest the nursery trade, and in particular olive tree importation from Iberian Peninsula, as the main pathway of introduction of alien reptiles in the Balearic islands. This trend has been reported also for recent invasions in NE Spain, thus showing that olive trees transplantation may be an effective vector for bioinvasion across the Mediterranean. The

Snakes on the Balearic islands: an invasion tale with implications for native biodiversity conservation.

Directory of Open Access Journals (Sweden)

Iolanda Silva-Rocha

Full Text Available Biological invasions are a major conservation threat for biodiversity worldwide. Islands are particularly vulnerable to invasive species, especially Mediterranean islands which have suffered human pressure since ancient times. In the Balearic archipelago, reptiles represent an outstanding case with more alien than native species. Moreover, in the last decade a new wave of alien snakes landed in the main islands of the archipelago, some of which were originally snake-free. The identification of the origin and colonization pathways of alien species, as well as the prediction of their expansion, is crucial to develop effective conservation strategies. In this study, we used molecular markers to assess the allochthonous status and the putative origin of the four introduced snake species (Hemorrhois hippocrepis, Malpolon monspessulanus, Macroprotodon mauritanicus and Rhinechis scalaris as well as ecological niche models to infer their patterns of invasion and expansion based on current and future habitat suitability. For most species, DNA sequence data suggested the Iberian Peninsula as the potential origin of the allochthonous populations, although the shallow phylogeographic structure of these species prevented the identification of a restricted source-area. For all of them, the ecological niche models showed a current low habitat suitability in the Balearic, which is however predicted to increase significantly in the next few decades under climate change scenarios. Evidence from direct observations and spatial distribution of the first-occurrence records of alien snakes (but also lizards and worm lizards suggest the nursery trade, and in particular olive tree importation from Iberian Peninsula, as the main pathway of introduction of alien reptiles in the Balearic islands. This trend has been reported also for recent invasions in NE Spain, thus showing that olive trees transplantation may be an effective vector for bioinvasion across the

Interaction between forest biodiversity and people's use of forest resources in Roviana, Solomon Islands: implications for biocultural conservation under socioeconomic changes.

Science.gov (United States)

Furusawa, Takuro; Sirikolo, Myknee Qusa; Sasaoka, Masatoshi; Ohtsuka, Ryutaro

2014-01-27

In Solomon Islands, forests have provided people with ecological services while being affected by human use and protection. This study used a quantitative ethnobotanical analysis to explore the society-forest interaction and its transformation in Roviana, Solomon Islands. We compared local plant and land uses between a rural village and urbanized village. Special attention was paid to how local people depend on biodiversity and how traditional human modifications of forest contribute to biodiversity conservation. After defining locally recognized land-use classes, vegetation surveys were conducted in seven forest classes. For detailed observations of daily plant uses, 15 and 17 households were randomly selected in the rural and urban villages, respectively. We quantitatively documented the plant species that were used as food, medicine, building materials, and tools. The vegetation survey revealed that each local forest class represented a different vegetative community with relatively low similarity between communities. Although commercial logging operations and agriculture were both prohibited in the customary nature reserve, local people were allowed to cut down trees for their personal use and to take several types of non-timber forest products. Useful trees were found at high frequencies in the barrier island's primary forest (68.4%) and the main island's reserve (68.3%). Various useful tree species were found only in the reserve forest and seldom available in the urban village. In the rural village, customary governance and control over the use of forest resources by the local people still functioned. Human modifications of the forest created unique vegetation communities, thus increasing biodiversity overall. Each type of forest had different species that varied in their levels of importance to the local subsistence lifestyle, and the villagers' behaviors, such as respect for forest reserves and the semidomestication of some species, contributed to

Growth strategies of tropical tree species: disentangling light and size effects.

Directory of Open Access Journals (Sweden)

Nadja Rüger

Full Text Available An understanding of the drivers of tree growth at the species level is required to predict likely changes of carbon stocks and biodiversity when environmental conditions change. Especially in species-rich tropical forests, it is largely unknown how species differ in their response of growth to resource availability and individual size. We use a hierarchical bayesian approach to quantify the impact of light availability and tree diameter on growth of 274 woody species in a 50-ha long-term forest census plot in Barro Colorado Island, Panama. Light reaching each individual tree was estimated from yearly vertical censuses of canopy density. The hierarchical bayesian approach allowed accounting for different sources of error, such as negative growth observations, and including rare species correctly weighted by their abundance. All species grew faster at higher light. Exponents of a power function relating growth to light were mostly between 0 and 1. This indicates that nearly all species exhibit a decelerating increase of growth with light. In contrast, estimated growth rates at standardized conditions (5 cm dbh, 5% light varied over a 9-fold range and reflect strong growth-strategy differentiation between the species. As a consequence, growth rankings of the species at low (2% and high light (20% were highly correlated. Rare species tended to grow faster and showed a greater sensitivity to light than abundant species. Overall, tree size was less important for growth than light and about half the species were predicted to grow faster in diameter when bigger or smaller, respectively. Together light availability and tree diameter only explained on average 12% of the variation in growth rates. Thus, other factors such as soil characteristics, herbivory, or pathogens may contribute considerably to shaping tree growth in the tropics.

TreePOD: Sensitivity-Aware Selection of Pareto-Optimal Decision Trees.

Science.gov (United States)

Muhlbacher, Thomas; Linhardt, Lorenz; Moller, Torsten; Piringer, Harald

2018-01-01

Balancing accuracy gains with other objectives such as interpretability is a key challenge when building decision trees. However, this process is difficult to automate because it involves know-how about the domain as well as the purpose of the model. This paper presents TreePOD, a new approach for sensitivity-aware model selection along trade-offs. TreePOD is based on exploring a large set of candidate trees generated by sampling the parameters of tree construction algorithms. Based on this set, visualizations of quantitative and qualitative tree aspects provide a comprehensive overview of possible tree characteristics. Along trade-offs between two objectives, TreePOD provides efficient selection guidance by focusing on Pareto-optimal tree candidates. TreePOD also conveys the sensitivities of tree characteristics on variations of selected parameters by extending the tree generation process with a full-factorial sampling. We demonstrate how TreePOD supports a variety of tasks involved in decision tree selection and describe its integration in a holistic workflow for building and selecting decision trees. For evaluation, we illustrate a case study for predicting critical power grid states, and we report qualitative feedback from domain experts in the energy sector. This feedback suggests that TreePOD enables users with and without statistical background a confident and efficient identification of suitable decision trees.

Climate shapes the novel plant communities that form after deforestation in Puerto Rico and the U.S. Virgin Islands

Science.gov (United States)

Thomas J. Brandeis; Eileen Helmer; H. Marcano-Vega; Ariel E. Lugo

2009-01-01

Environmental and past land use controls on tree species assemblages on the Commonwealth of Puerto Rico and the U.S. Virgin Islands were characterized to determine whether biophysical factors or land-use history has been more important in determining the species composition of secondary tropical forests after large-scale forest clearing for agriculture, widespread...

Two Trees: Migrating Fault Trees to Decision Trees for Real Time Fault Detection on International Space Station

Science.gov (United States)

Lee, Charles; Alena, Richard L.; Robinson, Peter

2004-01-01

We started from ISS fault trees example to migrate to decision trees, presented a method to convert fault trees to decision trees. The method shows that the visualizations of root cause of fault are easier and the tree manipulating becomes more programmatic via available decision tree programs. The visualization of decision trees for the diagnostic shows a format of straight forward and easy understands. For ISS real time fault diagnostic, the status of the systems could be shown by mining the signals through the trees and see where it stops at. The other advantage to use decision trees is that the trees can learn the fault patterns and predict the future fault from the historic data. The learning is not only on the static data sets but also can be online, through accumulating the real time data sets, the decision trees can gain and store faults patterns in the trees and recognize them when they come.

Multidecadal shoreline changes of atoll islands in the Marshall Islands

Science.gov (United States)

Ford, M.

2012-12-01

Atoll islands are considered highly vulnerable to the impacts of continued sea level rise. One of the most commonly predicted outcomes of continued sea level rise is widespread and chronic shoreline erosion. Despite the widespread implications of predicted erosion, the decadal scale changes of atoll island shorelines are poorly resolved. The Marshall Islands is one of only four countries where the majority of inhabited land is comprised of reef and atoll islands. Consisting of 29 atolls and 5 mid-ocean reef islands, the Marshall Islands are considered highly vulnerable to the impacts of sea level rise. A detailed analysis of shoreline change on over 300 islands on 10 atolls was undertaken using historic aerial photos (1945-1978) and modern high resolution satellite imagery (2004-2012). Results highlight the complex and dynamic nature of atoll islands, with significant shifts in shoreline position observed over the period of analysis. Results suggest shoreline accretion is the dominant mode of change on the islands studied, often associated with a net increase in vegetated island area. However, considerable inter- and intra-atoll variability exists with regards to shoreline stability. Findings are discussed with respect to island morphodynamics and potential hazard mitigation and planning responses within atoll settings.

Genetic and linguistic coevolution in Northern Island Melanesia.

Science.gov (United States)

Hunley, Keith; Dunn, Michael; Lindström, Eva; Reesink, Ger; Terrill, Angela; Healy, Meghan E; Koki, George; Friedlaender, Françoise R; Friedlaender, Jonathan S

2008-10-01

Recent studies have detailed a remarkable degree of genetic and linguistic diversity in Northern Island Melanesia. Here we utilize that diversity to examine two models of genetic and linguistic coevolution. The first model predicts that genetic and linguistic correspondences formed following population splits and isolation at the time of early range expansions into the region. The second is analogous to the genetic model of isolation by distance, and it predicts that genetic and linguistic correspondences formed through continuing genetic and linguistic exchange between neighboring populations. We tested the predictions of the two models by comparing observed and simulated patterns of genetic variation, genetic and linguistic trees, and matrices of genetic, linguistic, and geographic distances. The data consist of 751 autosomal microsatellites and 108 structural linguistic features collected from 33 Northern Island Melanesian populations. The results of the tests indicate that linguistic and genetic exchange have erased any evidence of a splitting and isolation process that might have occurred early in the settlement history of the region. The correlation patterns are also inconsistent with the predictions of the isolation by distance coevolutionary process in the larger Northern Island Melanesian region, but there is strong evidence for the process in the rugged interior of the largest island in the region (New Britain). There we found some of the strongest recorded correlations between genetic, linguistic, and geographic distances. We also found that, throughout the region, linguistic features have generally been less likely to diffuse across population boundaries than genes. The results from our study, based on exceptionally fine-grained data, show that local genetic and linguistic exchange are likely to obscure evidence of the early history of a region, and that language barriers do not particularly hinder genetic exchange. In contrast, global patterns may

Genetic and linguistic coevolution in Northern Island Melanesia.

Directory of Open Access Journals (Sweden)

Keith Hunley

2008-10-01

Full Text Available Recent studies have detailed a remarkable degree of genetic and linguistic diversity in Northern Island Melanesia. Here we utilize that diversity to examine two models of genetic and linguistic coevolution. The first model predicts that genetic and linguistic correspondences formed following population splits and isolation at the time of early range expansions into the region. The second is analogous to the genetic model of isolation by distance, and it predicts that genetic and linguistic correspondences formed through continuing genetic and linguistic exchange between neighboring populations. We tested the predictions of the two models by comparing observed and simulated patterns of genetic variation, genetic and linguistic trees, and matrices of genetic, linguistic, and geographic distances. The data consist of 751 autosomal microsatellites and 108 structural linguistic features collected from 33 Northern Island Melanesian populations. The results of the tests indicate that linguistic and genetic exchange have erased any evidence of a splitting and isolation process that might have occurred early in the settlement history of the region. The correlation patterns are also inconsistent with the predictions of the isolation by distance coevolutionary process in the larger Northern Island Melanesian region, but there is strong evidence for the process in the rugged interior of the largest island in the region (New Britain. There we found some of the strongest recorded correlations between genetic, linguistic, and geographic distances. We also found that, throughout the region, linguistic features have generally been less likely to diffuse across population boundaries than genes. The results from our study, based on exceptionally fine-grained data, show that local genetic and linguistic exchange are likely to obscure evidence of the early history of a region, and that language barriers do not particularly hinder genetic exchange. In contrast

Classication of Status of the Region on Java Island using C4.5, CHAID, and CART Methods

Science.gov (United States)

Syaraswati, R. A.; Slamet, I.; Winarno, B.

2017-06-01

The indicator of region economic success can be measured by economic growth, presented by value of Gross Regional Domestic Product (GRDP). Java island has the biggest GDP contribution toward the Indonesian government, but not all of the region gives equality contribution. The C4.5, CHAID, and CART methods can be used for classifying the status of the region with nonparametric approach. The C4.5 and CHAID methods are non-binary decision tree, meanwhile the CART methods is binary decision tree. The purposes of this paper are to know how the classification and to determine the factors that influence on classification of the region. The dependent variable is status of the region which is divided into four categories based on Klassen typology. The result shows factors that have the biggest contribution on classification of status of the region on Java island based on C4.5 method are economic growth rate, electricity, gas, and water sector, and area. The factors that have the biggest contribution based on CHAID method are growth rate, manufacturing sector, and electricity, gas, and water sector, while based on CART method are growth rate, manufacturing sector, and electricity, gas, and water sector.

Foundation Investigation for Ground Based Radar Project-Kwajalein Island, Marshall Islands

Science.gov (United States)

1990-04-01

iL_ COPY MISCELLANEOUS PAPER GL-90-5 i iFOUNDATION INVESTIGATION FOR GROUND BASED RADAR PROJECT--KWAJALEIN ISLAND, MARSHALL ISLANDS by Donald E...C!assification) Foundatioa Investigation for Ground Based Radar Project -- Kwajalein Island, Marshall Islands 12. PERSONAL AUTHOR(S) Yule, Donald E...investigation for the Ground Based Radar Project -- Kwajalein Island, Marshall Islands , are presented.- eophysical tests comprised of surface refrac- tion

A unique coral community in the mangroves of Hurricane Hole, St. John, US Virgin Islands

Science.gov (United States)

Rogers, Caroline S.

2017-01-01

Corals do not typically thrive in mangrove environments. However, corals are growing on and near the prop roots of red mangrove trees in Hurricane Hole, an area within the Virgin Islands Coral Reef National Monument under the protection of the US National Park Service in St. John, US Virgin Islands. This review summarizes current knowledge of the remarkable biodiversity of this area. Over 30 scleractinian coral species, about the same number as documented to date from nearby coral reefs, grow here. No other mangrove ecosystems in the Caribbean are known to have so many coral species. This area may be a refuge from changing climate, as these corals weathered the severe thermal stress and subsequent disease outbreak that caused major coral loss on the island’s coral reefs in 2005 and 2006. Shading by the red mangrove trees reduces the stress that leads to coral bleaching. Seawater temperatures in these mangroves are more variable than those on the reefs, and some studies have shown that this variability results in corals with a greater resistance to higher temperatures. The diversity of sponges and fish is also high, and a new genus of serpulid worm was recently described. Continuing research may lead to the discovery of more new species.

Overseas dispersal of Hyperolius reed frogs from Central Africa to the oceanic islands of Sao Tomé and Príncipe

Czech Academy of Sciences Publication Activity Database

Bell, R. C.; Drewes, R. C.; Channing, A.; Gvoždík, Václav; Kielgast, J.; Lötters, S.; Stuart, B. L.; Zamudio, K. R.

2015-01-01

Roč. 42, č. 1 (2015), s. 65-75 ISSN 0305-0270 Institutional support: RVO:68081766 Keywords : Central Africa * Congo River * Gulf of Guinea * Hyperolius * long -distance dispersal * oceanic island * biogeography * phylogeography * Príncipe * Sao Tomé * species tree Subject RIV: EG - Zoology Impact factor: 3.997, year: 2015

Oak habitat recovery on California's largest islands: Scenarios for the role of corvid seed dispersal

Science.gov (United States)

Pesendorfer, Mario B.; Baker, Christopher M.; Stringer, Martin; McDonald-Madden, Eve; Bode, Michael; McEachern, A. Kathryn; Morrison, Scott A.; Sillett, T. Scott

2018-01-01

Seed dispersal by birds is central to the passive restoration of many tree communities. Reintroduction of extinct seed dispersers can therefore restore degraded forests and woodlands. To test this, we constructed a spatially explicit simulation model, parameterized with field data, to consider the effect of different seed dispersal scenarios on the extent of oak populations. We applied the model to two islands in California's Channel Islands National Park (USA), one of which has lost a key seed disperser.We used an ensemble modelling approach to simulate island scrub oak (Quercus pacifica) demography. The model was developed and trained to recreate known population changes over a 20-year period on 250-km2 Santa Cruz Island, and incorporated acorn dispersal by island scrub-jays (Aphelocoma insularis), deer mice (Peromyscus maniculatus) and gravity, as well as seed predation. We applied the trained model to 215-km2 Santa Rosa Island to examine how reintroducing island scrub-jays would affect the rate and pattern of oak population expansion. Oak habitat on Santa Rosa Island has been greatly reduced from its historical extent due to past grazing by introduced ungulates, the last of which were removed by 2011.Our simulation model predicts that a seed dispersal scenario including island scrub-jays would increase the extent of the island scrub oak population on Santa Rosa Island by 281% over 100 years, and by 544% over 200 years. Scenarios without jays would result in little expansion. Simulated long-distance seed dispersal by jays also facilitates establishment of discontinuous patches of oaks, and increases their elevational distribution.Synthesis and applications. Scenario planning provides powerful decision support for conservation managers. We used ensemble modelling of plant demographic and seed dispersal processes to investigate whether the reintroduction of seed dispersers could provide cost-effective means of achieving broader ecosystem restoration goals on

i-Tree: Tools to assess and manage structure, function, and value of community forests

Science.gov (United States)

Hirabayashi, S.; Nowak, D.; Endreny, T. A.; Kroll, C.; Maco, S.

2011-12-01

Trees in urban communities can mitigate many adverse effects associated with anthropogenic activities and climate change (e.g. urban heat island, greenhouse gas, air pollution, and floods). To protect environmental and human health, managers need to make informed decisions regarding urban forest management practices. Here we present the i-Tree suite of software tools (www.itreetools.org) developed by the USDA Forest Service and their cooperators. This software suite can help urban forest managers assess and manage the structure, function, and value of urban tree populations regardless of community size or technical capacity. i-Tree is a state-of-the-art, peer-reviewed Windows GUI- or Web-based software that is freely available, supported, and continuously refined by the USDA Forest Service and their cooperators. Two major features of i-Tree are 1) to analyze current canopy structures and identify potential planting spots, and 2) to estimate the environmental benefits provided by the trees, such as carbon storage and sequestration, energy conservation, air pollution removal, and storm water reduction. To cover diverse forest topologies, various tools were developed within the i-Tree suite: i-Tree Design for points (individual trees), i-Tree Streets for lines (street trees), and i-Tree Eco, Vue, and Canopy (in the order of complexity) for areas (community trees). Once the forest structure is identified with these tools, ecosystem services provided by trees can be estimated with common models and protocols, and reports in the form of texts, charts, and figures are then created for users. Since i-Tree was developed with a client/server architecture, nationwide data in the US such as location-related parameters, weather, streamflow, and air pollution data are stored in the server and retrieved to a user's computer at run-time. Freely available remote-sensed images (e.g. NLCD and Google maps) are also employed to estimate tree canopy characteristics. As the demand for i-Tree

Reconstructed tree fern Alethopteris zeilleri (Carboniferous, Medullosales)

Energy Technology Data Exchange (ETDEWEB)

Zodrow, Erwin L. [Department of Earth Sciences, University College of Cape Breton, Sydney, Nova, Scotia (Canada B1P 6L2)

2007-01-02

From a smaller open-pit area in the roof shale of the basal Cantabrian coal seam in Sydney Coalfield, Cape Breton Island, Nova Scotia, Canada, large amounts of the pteridosperm foliage Alethopteris zeilleri (Ragot) were found. This foliage is associated with abundant, naked medullosalean axes and dichotomies of varying sizes, up to 0.80-m long, cauline structures 0.90 m and 1.3 m long, detached ovules assigned to Pachytesta incrassata Brongniart, rare male-pollen organs of the type Dolerotheca Halle, rooted tree ferns in life position, and one specimen each of a juvenile medullosalean frond and root mantle. The fossils are compression/impression-preserved, and the foliage yielded thickly cutinized cuticles with unoriented cells (57-103 by 27-57 {mu}m) in intercostal fields. Ultimate rachises, and abaxial surfaces (excluding costal fields) show a mixture of simple and complexly-branched trichomes, and two different structural bases. These, together with fractal dimensionality of curvatures of anticlinal walls in intercostal fields, have taxonomic potential for alethopterids. The finds suggest reconstructing A. zeilleri (Ragot) as a tree, 5-7 m high, that bore both P. incrassata Brongniart and Dolerotheca-type fructifications. Its habitat was low-land coastal plains in the Pennsylvanian coal swamps of ancestral Sydney Coalfield. (author)

Tree Nut Allergies

Science.gov (United States)

... Blog Vision Awards Common Allergens Tree Nut Allergy Tree Nut Allergy Learn about tree nut allergy, how ... a Tree Nut Label card . Allergic Reactions to Tree Nuts Tree nuts can cause a severe and ...

Molecular and morphological characterization of Xiphinema chambersi population from live oak in Jekyll Island, Georgia, with comments on morphometric variations

Science.gov (United States)

Zafar A Handoo; Lynn K. Carta; Andrea M. Skantar; Sergei A. Subbotin; Stephen W. Fraedrich

2016-01-01

A population of Xiphinema chambersi from the root zone around live oak (Quercus virginiana Mill.) trees on Jekyll Island, GA, is described using both morphological and molecular tools and compared with descriptions of type specimens. Initially, because of a few morphological differences, this nematode was thought to represent...

Molecular and morphological characterization of Xiphinema chambersi population from live oak in Jekyll Island, Georgia, with comments on morphometric variations

Science.gov (United States)

Zafar A. Handoo; Lynn K. Carta; Andrea M. Skantar; Sergei A. Subbotin; Stephen Fraedrich

2016-01-01

A population of Xiphinema chambersi from the root zone around live oak (Quercus virginiana Mill.) trees on Jekyll Island, GA, is described using both morphological and molecular tools and compared with descriptions of type specimens. Initially, because of a few morphological differences, this nematode was thought to represent an undescribed species. However, on further...

Can REDD+ help the conservation of restricted-range island species? Insights from the endemism hotspot of São Tomé

DEFF Research Database (Denmark)

de Lima, Ricardo Faustino; Olmos, Fábio; Dallimer, Martin

2013-01-01

, using São Tomé Island (Democratic Republic of São Tomé and Príncipe) as a case study. We quantified the abundance of bird and tree species, and calculated the aboveground carbon stocks across a gradient of land-use intensity. We found a strong spatial congruence between carbon and the presence...

Oak Bark Allometry and Fire Survival Strategies in the Chihuahuan Desert Sky Islands, Texas, USA

OpenAIRE

Schwilk, Dylan W.; Gaetani, Maria S.; Poulos, Helen M.

2013-01-01

Trees may survive fire through persistence of above or below ground structures. Investment in bark aids in above-ground survival while investment in carbohydrate storage aids in recovery through resprouting and is especially important following above-ground tissue loss. We investigated bark allocation and carbohydrate investment in eight common oak (Quercus) species of Sky Island mountain ranges in west Texas. We hypothesized that relative investment in bark and carbohydrates changes with tre...

Should we plant trees to offset greenhouse gas emissions in semi-arid environments?

Science.gov (United States)

Pataki, D. E.; Pincetl, S.; Gillespie, T. W.; Li, W.; McCarthy, H. R.; Saatchi, S.; Saphores, J.

2008-12-01

Urban tree planting programs have been gaining popularity in the United States. Urban trees have been associated with a variety of environmental benefits, including improvements in air quality, mitigation of urban heat island effects, reductions in stormwater runoff, and more recently, carbon sequestration. There are also other potential aesthetic and economic benefits of urban forests, which have been shown to affect real estate values. However, there may also be significant economic and environmental costs of planting and maintaining trees in urban areas, particularly in semi-arid environments where trees are not native and require irrigation and fertilization. We are conducting an analysis of the Million Tree Initiative in the city of Los Angeles, which has committed to a major tree planting program. Los Angeles currently has a low tree canopy cover relative to other cities, particularly in its low income neighborhoods. We are evaluating the decision-making processes associated with the new tree planting program, its perceived benefits, and its actual benefits based on measurements of plant and ecosystem processes such as transpiration, photosynthesis, and water use efficiency; remote sensing analyses of tree cover and surface temperature; and economic analyses. We have found great variability in the interpretation of the program by its various participants, but also significant institutional learning as the program has evolved. Our datasets have challenged some of the common assumptions of the program, for example, the assumption that native species use less water than imported species and are therefore more environmentally beneficial in terms of water resources. We have also found significant impacts of the urban forest on air temperature, which may reduce energy use during the summer due to reductions in air conditioning. This is likely to be a larger effect of urban trees on greenhouse gas emissions than direct carbon sequestration alone, which is a very

Land cover and forest formation distributions for St. Kitts, Nevis, St. Eustatius, Grenada and Barbados from decision tree classification of cloud-cleared satellite imagery

Science.gov (United States)

Helmer, E.H.; Kennaway, T.A.; Pedreros, D.H.; Clark, M.L.; Marcano-Vega, H.; Tieszen, L.L.; Ruzycki, T.R.; Schill, S.R.; Carrington, C.M.S.

2008-01-01

Satellite image-based mapping of tropical forests is vital to conservation planning. Standard methods for automated image classification, however, limit classification detail in complex tropical landscapes. In this study, we test an approach to Landsat image interpretation on four islands of the Lesser Antilles, including Grenada and St. Kitts, Nevis and St. Eustatius, testing a more detailed classification than earlier work in the latter three islands. Secondly, we estimate the extents of land cover and protected forest by formation for five islands and ask how land cover has changed over the second half of the 20th century. The image interpretation approach combines image mosaics and ancillary geographic data, classifying the resulting set of raster data with decision tree software. Cloud-free image mosaics for one or two seasons were created by applying regression tree normalization to scene dates that could fill cloudy areas in a base scene. Such mosaics are also known as cloud-filled, cloud-minimized or cloud-cleared imagery, mosaics, or composites. The approach accurately distinguished several classes that more standard methods would confuse; the seamless mosaics aided reference data collection; and the multiseason imagery allowed us to separate drought deciduous forests and woodlands from semi-deciduous ones. Cultivated land areas declined 60 to 100 percent from about 1945 to 2000 on several islands. Meanwhile, forest cover has increased 50 to 950%. This trend will likely continue where sugar cane cultivation has dominated. Like the island of Puerto Rico, most higher-elevation forest formations are protected in formal or informal reserves. Also similarly, lowland forests, which are drier forest types on these islands, are not well represented in reserves. Former cultivated lands in lowland areas could provide lands for new reserves of drier forest types. The land-use history of these islands may provide insight for planners in countries currently considering

Big trees, old trees, and growth factor tables

Science.gov (United States)

Kevin T. Smith

2018-01-01

The potential for a tree to reach a great size and to live a long life frequently captures the public's imagination. Sometimes the desire to know the age of an impressively large tree is simple curiosity. For others, the date-of-tree establishment can make a big diff erence for management, particularly for trees at historic sites or those mentioned in property...

A Suffix Tree Or Not a Suffix Tree?

DEFF Research Database (Denmark)

Starikovskaya, Tatiana; Vildhøj, Hjalte Wedel

2015-01-01

In this paper we study the structure of suffix trees. Given an unlabeled tree r on n nodes and suffix links of its internal nodes, we ask the question “Is r a suffix tree?”, i.e., is there a string S whose suffix tree has the same topological structure as r? We place no restrictions on S, in part...

Fog reduces transpiration in tree species of the Canarian relict heath-laurel cloud forest (Garajonay National Park, Spain).

Science.gov (United States)

Ritter, Axel; Regalado, Carlos M; Aschan, Guido

2009-04-01

The ecophysiologic role of fog in the evergreen heath-laurel 'laurisilva' cloud forests of the Canary Islands has not been unequivocally demonstrated, although it is generally assumed that fog water is important for the survival and the distribution of this relict paleoecosystem of the North Atlantic Macaronesian archipelagos. To determine the role of fog in this ecosystem, we combined direct transpiration measurements of heath-laurel tree species, obtained with Granier's heat dissipation probes, with micrometeorological and artificial fog collection measurements carried out in a 43.7-ha watershed located in the Garajonay National Park (La Gomera, Canary Islands, Spain) over a 10-month period. Median ambient temperature spanned from 7 to 15 degrees C under foggy conditions whereas higher values, ranging from 9 to 21 degrees C, were registered during fog-free periods. Additionally, during the periods when fog water was collected, global solar radiation values were linearly related (r2=0.831) to those under fog-free conditions, such that there was a 75+/-1% reduction in median radiation in response to fog. Fog events greatly reduced median diurnal tree transpiration, with rates about 30 times lower than that during fog-free conditions and approximating the nighttime rates in both species studied (the needle-like leaf Erica arborea L. and the broadleaf Myrica faya Ait.). This large decrease in transpiration in response to fog was independent of the time of the day, tree size and species and micrometeorological status, both when expressed on a median basis and in cumulative terms for the entire 10-month measuring period. We conclude that, in contrast to the turbulent deposition of fog water droplets on the heath-laurel species, which may be regarded as a localized hydrological phenomenon that is important for high-altitude wind-exposed E. arborea trees, the cooler, wetter and shaded microenvironment provided by the cloud immersion belt represents a large-scale effect

Current land bird distribution and trends in population abundance between 1982 and 2012 on Rota, Mariana Islands

Science.gov (United States)

Camp, Richard J.; Brinck, Kevin W.; Gorresen, P. Marcos; Amidon, Fred A.; Radley, Paul M.; Berkowitz, S. Paul; Banko, Paul C.

2015-01-01

The western Pacific island of Rota is the fourth largest human-inhabited island in the Mariana archipelago and designated an Endemic Bird Area. Between 1982 and 2012, 12 point-transect distance-sampling surveys were conducted to assess bird population status. Surveys did not consistently sample the entire island; thus, we used a ratio estimator to estimate bird abundances in strata not sampled during every survey. Trends in population size were reliably estimated for 11 of 13 bird species, and 7 species declined over the 30-y time series, including the island collared-dove Streptopelia bitorquata, white-throated ground-dove Gallicolumba xanthonura, Mariana fruit-dove Ptilinopus roseicapilla, collared kingfisher Todiramphus chloris orii, Micronesian myzomela Myzomela rubratra, black drongo Dicrurus macrocercus, and Mariana crow Corvus kubaryi. The endangered Mariana crow (x̄  =  81 birds, 95% CI 30–202) declined sharply to fewer than 200 individuals in 2012, down from 1,491 birds in 1982 (95% CI  =  815–3,115). Trends increased for white tern Gygis alba, rufous fantail Rhipidura rufifrons mariae, and Micronesian starling Aplonis opaca. Numbers of the endangered Rota white-eye Zosterops rotensis declined from 1982 to the late 1990s but returned to 1980s levels by 2012, resulting in an overall stable trend. Trends for the yellow bittern Ixobrychus sinensis were inconclusive. Eurasian tree sparrow Passer montanus trends were not assessed; however, their numbers in 1982 and 2012 were similar. Occupancy models of the 2012 survey data revealed general patterns of land cover use and detectability among 12 species that could be reliably modeled. Occupancy was not assessed for the Eurasian tree sparrow because of insufficient detections. Based on the 2012 survey, bird distribution and abundance across Rota revealed three general patterns: 1) range restriction, including Mariana crow, Rota white-eye, and Eurasian tree sparrow; 2) widespread distribution, low

Economic costs of electrical system instability and power outages caused by snakes on the Island of Guam

Science.gov (United States)

Fritts, T.H.

2002-01-01

The Brown Tree Snake, Boiga irregularis, is an introduced species on Guam where it causes frequent electrical power outages. The snake's high abundance, its propensity for climbing, and use of disturbed habitats all contribute to interruption of Guam's electrical service and the activities that depend on electrical power. Snakes have caused more than 1600 power outages in the 20-yr period of 1978–1997 and most recently nearly 200 outages per year. Single outages spanning the entire island and lasting 8 or more hours are estimated to cost in excess of $3,000,000 in lost productivity, but the costs of outages that involve only parts of the island or those of shorter durations are more difficult to quantify. Costs to the island's economy have exceeded $4.5 M $4.5M"> per year over a 7-yr period without considering repair costs, damage to electrical equipment, and lost revenues. Snakes pose the greatest problem on high voltage transmission lines, on transformers, and inside electrical substations.

Monitoring Coral Health to Determine Coral Bleaching Response at High Latitude Eastern Australian Reefs: An Applied Model for A Changing Climate

Directory of Open Access Journals (Sweden)

Andrew G. Carroll

2011-09-01

Full Text Available Limited information is available on the bleaching susceptibility of coral species that dominate high latitude reefs along the eastern seaboard of Australia. The main aims of this study were to: (i monitor coral health and spatial patterns of coral bleaching response at the Solitary Islands Marine Park (SIMP and Lord Howe Island Marine Park (LHIMP, to determine variability of bleaching susceptibility among coral taxa; (ii predict coral bleaching thresholds at 30 °S and 31.5 °S, extrapolated from published bleaching threshold data; and (iii propose a subtropical northern New South Wales coral bleaching model from biological and physical data. Between 2005 and 2007 minor bleaching was observed in dominant coral families including Pocilloporidae, Poritidae and Dendrophylliidae in the SIMP and Pocilloporidae, Poritidae and Acroporidae (Isopora and Montipora spp. in the LHIMP, with a clear difference in bleaching susceptibility found between sites, both within and between locations. Bleaching susceptibility was highest in Porites spp. at the most offshore island site within the SIMP during summer 2005. Patterns of subtropical family bleaching susceptibility within the SIMP and LHIMP differed to those previously reported for the central Great Barrier Reef (GBR. These differences may be due to a number of factors, including temperature history and/or the coral hosts association with different zooxanthellae clades, which may have lower thermal tolerances. An analysis of published estimates of coral bleaching thresholds from the Caribbean, South Africa, GBR and central and northern Pacific regions suggests that the bleaching threshold at 30–31.5 °S ranges between 26.5–26.8 °C. This predicted threshold was confirmed by an extensive coral bleaching event on the world’s southernmost coral reef at Lord Howe Island, during the 2010 austral summer season. These results imply that dominant coral taxa at subtropical reefs along the eastern Australian

Island in an island – The suggestions for transportation improvement plan for Haidian Island, Haikou, Hainan

Directory of Open Access Journals (Sweden)

Sia Rosalind Juo Ling

2017-01-01

Full Text Available Haidian Island, which situated at the Northern part of Haikou City of Hainan Province, is an island within a city. Haidian Island is unique in term of it's development which centered around an university, the Hainan University, besides some others important landmarks, such as Haikou city hospital, Baishamen municipal park, Golf Driving Range etc. All commercials, residential, recreational activities etc are planned to serve Hainan University in particular. The study, taking ‘Haidian Island Area Development Control Plan’ as case study, would like to look into the importance of transportation and traffic planning. The study used observation, site investigation and traffic study methods to gather data needed. Firstly the study analyzed the current state of transportation system for Haidian Island in accordance to the Island Development Control plan and Haikou master plan and identified the problems. Then, the study made some recommendations for these problems. The study highlighted the important of non-motorized, cycling and walking as the main transportation system for an education-based island and as supportive to domestic tourism activities found. The transportation planning suggested by the study took ‘green and low-carbon’ approaches considered the role of University as the core activity in the island.

Stop and Go - Waves of Tarsier Dispersal Mirror the Genesis of Sulawesi Island.

Science.gov (United States)

Driller, Christine; Merker, Stefan; Perwitasari-Farajallah, Dyah; Sinaga, Walberto; Anggraeni, Novita; Zischler, Hans

2015-01-01

The Indonesian island of Sulawesi harbors a highly endemic and diverse fauna sparking fascination since long before Wallace's contemplation of biogeographical patterns in the region. Allopatric diversification driven by geological or climatic processes has been identified as the main mechanism shaping present faunal distribution on the island. There is both consensus and conflict among range patterns of terrestrial species pointing to the different effects of vicariant events on once co-distributed taxa. Tarsiers, small nocturnal primates with possible evidence of an Eocene fossil record on the Asian mainland, are at present exclusively found in insular Southeast Asia. Sulawesi is hotspot of tarsier diversity, whereby island colonization and subsequent radiation of this old endemic primate lineage remained largely enigmatic. To resolve the phylogeographic history of Sulawesi tarsiers we analyzed an island-wide sample for a set of five approved autosomal phylogenetic markers (ABCA1, ADORA3, AXIN1, RAG1, and TTR) and the paternally inherited SRY gene. We constructed ML and Bayesian phylogenetic trees and estimated divergence times between tarsier populations. We found that their arrival at the Proto-Sulawesi archipelago coincided with initial Miocene tectonic uplift and hypothesize that tarsiers dispersed over the region in distinct waves. Intra-island diversification was spurred by land emergence and a rapid succession of glacial cycles during the Plio-Pleistocene. Some tarsier range boundaries concur with spatial limits in other taxa backing the notion of centers of faunal endemism on Sulawesi. This congruence, however, has partially been superimposed by taxon-specific dispersal patterns.

Rainfall, fog and throughfall dynamics in a sub-tropical ridge-top cloud forest, National Park of Garajonay (La Gomera, Canary Islands, Spain)

NARCIS (Netherlands)

García-Santos, G.; Bruijnzeel, L.A.

2011-01-01

Mixed tree-heath/beech forest is a type of subtropical montane cloud forest found on wind- and fog-exposed ridges in the Canary Islands. With a dry season of 5 months and an annual precipitation of 600-700 mm, the extra water inputs through fog interception assume particular importance in this

Tree-growth analyses to estimate tree species' drought tolerance

NARCIS (Netherlands)

Eilmann, B.; Rigling, A.

2012-01-01

Climate change is challenging forestry management and practices. Among other things, tree species with the ability to cope with more extreme climate conditions have to be identified. However, while environmental factors may severely limit tree growth or even cause tree death, assessing a tree

TreeNetViz: revealing patterns of networks over tree structures.

Science.gov (United States)

Gou, Liang; Zhang, Xiaolong Luke

2011-12-01

Network data often contain important attributes from various dimensions such as social affiliations and areas of expertise in a social network. If such attributes exhibit a tree structure, visualizing a compound graph consisting of tree and network structures becomes complicated. How to visually reveal patterns of a network over a tree has not been fully studied. In this paper, we propose a compound graph model, TreeNet, to support visualization and analysis of a network at multiple levels of aggregation over a tree. We also present a visualization design, TreeNetViz, to offer the multiscale and cross-scale exploration and interaction of a TreeNet graph. TreeNetViz uses a Radial, Space-Filling (RSF) visualization to represent the tree structure, a circle layout with novel optimization to show aggregated networks derived from TreeNet, and an edge bundling technique to reduce visual complexity. Our circular layout algorithm reduces both total edge-crossings and edge length and also considers hierarchical structure constraints and edge weight in a TreeNet graph. These experiments illustrate that the algorithm can reduce visual cluttering in TreeNet graphs. Our case study also shows that TreeNetViz has the potential to support the analysis of a compound graph by revealing multiscale and cross-scale network patterns. © 2011 IEEE

Genetic differentiation in Elaeocarpus photiniifolia (Elaeocarpaceae) associated with geographic distribution and habitat variation in the Bonin (Ogasawara) Islands.

Science.gov (United States)

Sugai, Kyoko; Setsuko, Suzuki; Nagamitsu, Teruyoshi; Murakami, Noriaki; Kato, Hidetoshi; Yoshimaru, Hiroshi

2013-11-01

Gene flow between populations in different environmental conditions can be limited due to divergent natural selection, thus promoting genetic differentiation. Elaeocarpus photiniifolia, an endemic tree species in the Bonin Islands, is distributed in two types of habitats, dry scrubs and mesic forests. We aim to elucidate the genetic differentiation in E. photiniifolia within and between islands and between the habitat types. We investigated genotypes of 639 individuals from 19 populations of E. photiniifolia and its closely-related E. sylvestris at 24 microsatellite loci derived from expressed sequence tags. The data revealed genetic differentiation (1) between E. photiniifolia and E. sylvestris (0.307 ≤ F ST ≤ 0.470), (2) between the E. photiniifolia populations of the Chichijima and Hahajima Island Groups in the Bonin Islands (0.033 ≤ F ST ≤ 0.121) and (3) between E. photiniifolia populations associated with dry scrubs and mesic forests in the Chichijima Island Group (0.005 ≤ F ST ≤ 0.071). Principal coordinate analysis and Bayesian clustering analysis also showed that genetically distinct groups were associated with the habitat types, and isolation by distance was not responsible for the genetic differentiation. These findings suggest that E. photiniifolia is divided into genetically differentiated groups associated with different environmental conditions in the Bonin Islands.

A sub-fossil kauri (Agathis australis) tree-ring chronology

International Nuclear Information System (INIS)

Bridge, M.C.; Ogden, J.

1986-01-01

A 491-year floating tree-ring chronology was constructed using sub-fossil bog kauris, Agathis australis, from a site near Huntly, North Island, New Zealand. The chronology has been approximately dated to within the period 3,500 B.P. to 3,000 B.P. by radiocarbon dating. This is the first sub-fossil New Zealand chronology, and shows the potential for the formation of a long chronology from the present back over several millenia. The applications of this chronology and its possible extensions include radiocarbon calibration for the Southern Hemisphere, and climatic reconstructions based on ring-widths. It will also assist interpretation of the history of the Waikato Valley over the last few millenia

TREE SELECTING AND TREE RING MEASURING IN DENDROCHRONOLOGICAL INVESTIGATIONS

Directory of Open Access Journals (Sweden)

Sefa Akbulut

2004-04-01

Full Text Available Dendrochronology is a method of dating which makes use of the annual nature of tree growth. Dendrochronology may be divided into a number of subfields, each of which covers one or more aspects of the use of tree ring data: dendroclimatology, dendrogeomorphology, dendrohydrology, dendroecology, dendroarchaelogy, and dendrogylaciology. Basic of all form the analysis of the tree rings. The wood or tree rings can aid to dating past events about climatology, ecology, geology, hydrology. Dendrochronological studies are conducted either on increment cores or on discs. It may be seen abnormalities on tree rings during the measurement like that false rings, missing rings, reaction wood. Like that situation, increment cores must be extracted from four different sides of each tree and be studied as more as on tree.

Demography and natural history of the common fruit bat, Artibeus jamaicensis, on Barro Colorado Island, Panama

Science.gov (United States)

1991-01-01

Bats were marked and monitored on Barro Colorado Island, Panama, to study seasonal and annual variation in distribution, abundance, and natural history from 1975 through 1980. Data gathered advances our knowledge about flocking; abundance; feeding strategies; social behavior; species richness; population structure and stability; age and sex ratios; life expectancy and longevity; nightly, seasonal, and annual movements; synchrony within and between species in reproductive activity; timing of reproductive cycles; survival and dispersal of recruits; intra-and inter-specific relationships; and day and night roost selection. Barro Colorado Island (BCI) harbors large populations of bats that feed on the fruit of canopy trees, especially figs. These trees are abundant, and the individual asynchrony of their fruiting rhythms results in a fairly uniform abundance of fruit. When figs are scarce, a variety of other fruits is available to replace them. This relatively dependable food supply attracts a remarkably rich guild of bats. Although we marked all bats caught, we tried to maximize the number of Artibeus jamaicensis netted, because it is abundant (2/3 of the total catch of bats on BCI), easily captured by conventional means (mist nets set at ground level), and responds well to handling and marking. An average Artibeus jamaicensis is a 45 g frugivore that eats roughly its weight in fruit every night. These bats prefer figs and often seek them out even when other types of fruit they might eat are far more abundant. They commute several hundred meters to feeding trees on the average, feeding on fruit from one to four trees each night, and returning to a single fruiting tree an average of four nights in succession. The bats tend to fly farther when fewer fig trees are bearing ripe fruit, and they feed from fewer trees, on the average, when the moon is nearly full. These bats, like their congeners, do not feed in the fruiting tree itself. Instead, they select a fruit and

Visualizing Individual Tree Differences in Tree-Ring Studies

Directory of Open Access Journals (Sweden)

Mario Trouillier

2018-04-01

Full Text Available Averaging tree-ring measurements from multiple individuals is one of the most common procedures in dendrochronology. It serves to filter out noise from individual differences between trees, such as competition, height, and micro-site effects, which ideally results in a site chronology sensitive to regional scale factors such as climate. However, the climate sensitivity of individual trees can be modulated by factors like competition, height, and nitrogen deposition, calling attention to whether average chronologies adequately assess climatic growth-control. In this study, we demonstrate four simple but effective methods to visually assess differences between individual trees. Using individual tree climate-correlations we: (1 employed jitter plots with superimposed metadata to assess potential causes for these differences; (2 plotted the frequency distributions of climate correlations over time as heat maps; (3 mapped the spatial distribution of climate sensitivity over time to assess spatio-temporal dynamics; and (4 used t-distributed Stochastic Neighborhood Embedding (t-SNE to assess which trees were generally more similar in terms of their tree-ring pattern and their correlation with climate variables. This suite of exploratory methods can indicate if individuals in tree-ring datasets respond differently to climate variability, and therefore, should not solely be explored with climate correlations of the mean population chronology.

Islands and non-islands in native and heritage Korean

Directory of Open Access Journals (Sweden)

Boyoung eKim

2016-02-01

Full Text Available To a large extent, island phenomena are cross-linguistically invariable, but English and Korean present some striking differences in this domain. English has wh-movement and Korean does not, and while both languages show sensitivity to wh-islands, only English has island effects for adjunct clauses. Given this complex set of differences, one might expect Korean/English bilinguals, and especially heritage Korean speakers (i.e. early bilinguals whose L2 became their dominant language during childhood to be different from native speakers, since heritage speakers have had more limited exposure to Korean, may have had incomplete acquisition and/or attrition, and may show significant transfer effects from the L2. Here we examine islands in heritage speakers of Korean in the U.S. Through a series of four formal acceptability experiments comparing these heritage speakers with native speakers residing in Korea, we show that the two groups are remarkably similar. Both show clear evidence for wh-islands and an equally clear lack of adjunct island effects. Given the very different linguistic environment that the heritage speakers have had since early childhood, this result lends support to the idea that island phenomena are largely immune to environmental influences and stem from deeper properties of the processor and/or grammar. Similarly, it casts some doubt on recent proposals that islands are learned from the input.

Class renormalization: islands around islands

International Nuclear Information System (INIS)

Meiss, J.D.

1986-01-01

An orbit of 'class' is one that rotates about a periodic orbit of one lower class with definite frequency. This contrasts to the 'level' of a periodic orbit which is the number of elements in its continued fraction expansion. Level renormalization is conventionally used to study the structure of quasi-periodic orbits. The scaling structure of periodic orbits encircling other periodic orbits in area preserving maps is discussed here. Fixed points corresponding to the accumulation of p/q bifurcations are found and scaling exponents determined. Fixed points for q > 2 correspond to self-similar islands around islands. Frequencies of the island boundary circles at the fixed points are obtained. Importance of this scaling for the motion of particles in stochastic regions is emphasized. (author)

Fault tree handbook

International Nuclear Information System (INIS)

Haasl, D.F.; Roberts, N.H.; Vesely, W.E.; Goldberg, F.F.

1981-01-01

This handbook describes a methodology for reliability analysis of complex systems such as those which comprise the engineered safety features of nuclear power generating stations. After an initial overview of the available system analysis approaches, the handbook focuses on a description of the deductive method known as fault tree analysis. The following aspects of fault tree analysis are covered: basic concepts for fault tree analysis; basic elements of a fault tree; fault tree construction; probability, statistics, and Boolean algebra for the fault tree analyst; qualitative and quantitative fault tree evaluation techniques; and computer codes for fault tree evaluation. Also discussed are several example problems illustrating the basic concepts of fault tree construction and evaluation

Coastal fog during summer drought improves the water status of sapling trees more than adult trees in a California pine forest.

Science.gov (United States)

Baguskas, Sara A; Still, Christopher J; Fischer, Douglas T; D'Antonio, Carla M; King, Jennifer Y

2016-05-01

Fog water inputs can offset seasonal drought in the Mediterranean climate of coastal California and may be critical to the persistence of many endemic plant species. The ability to predict plant species response to potential changes in the fog regime hinges on understanding the ways that fog can impact plant physiological function across life stages. Our study uses a direct metric of water status, namely plant water potential, to understand differential responses of adult versus sapling trees to seasonal drought and fog water inputs. We place these measurements within a water balance framework that incorporates the varying climatic and soil property impacts on water budgets and deficit. We conducted our study at a coastal and an inland site within the largest stand of the regionally endemic bishop pine (Pinus muricata D. Don) on Santa Cruz Island. Our results show conclusively that summer drought negatively affects the water status of sapling more than adult trees and that sapling trees are also more responsive to changes in shallow soil moisture inputs from fog water deposition. Moreover, between the beginning and end of a large, late-season fog drip event, water status increased more for saplings than for adults. Relative to non-foggy conditions, we found that fog water reduces modeled peak water deficit by 80 and 70 % at the inland and coastal sites, respectively. Results from our study inform mechanistically based predictions of how population dynamics of this and other coastal species may be affected by a warmer, drier, and potentially less foggy future.

Mapping Urban Tree Canopy Coverage and Structure using Data Fusion of High Resolution Satellite Imagery and Aerial Lidar

Science.gov (United States)

Elmes, A.; Rogan, J.; Williams, C. A.; Martin, D. G.; Ratick, S.; Nowak, D.

2015-12-01

Urban tree canopy (UTC) coverage is a critical component of sustainable urban areas. Trees provide a number of important ecosystem services, including air pollution mitigation, water runoff control, and aesthetic and cultural values. Critically, urban trees also act to mitigate the urban heat island (UHI) effect by shading impervious surfaces and via evaporative cooling. The cooling effect of urban trees can be seen locally, with individual trees reducing home HVAC costs, and at a citywide scale, reducing the extent and magnitude of an urban areas UHI. In order to accurately model the ecosystem services of a given urban forest, it is essential to map in detail the condition and composition of these trees at a fine scale, capturing individual tree crowns and their vertical structure. This paper presents methods for delineating UTC and measuring canopy structure at fine spatial resolution (body of methods, relying on a data fusion method to combine the information contained in high resolution WorldView-3 satellite imagery and aerial lidar data using an object-based image classification approach. The study area, Worcester, MA, has recently undergone a large-scale tree removal and reforestation program, following a pest eradication effort. Therefore, the urban canopy in this location provides a wide mix of tree age class and functional type, ideal for illustrating the effectiveness of the proposed methods. Early results show that the object-based classifier is indeed capable of identifying individual tree crowns, while continued research will focus on extracting crown structural characteristics using lidar-derived metrics. Ultimately, the resulting fine resolution UTC map will be compared with previously created UTC maps of the same area but for earlier dates, producing a canopy change map corresponding to the Worcester area tree removal and replanting effort.

Biological and environmental controls on tree transpiration in a suburban landscape

Science.gov (United States)

Peters, Emily B.; McFadden, Joseph P.; Montgomery, Rebecca A.

2010-12-01

Tree transpiration provides a variety of ecosystem services in urban areas, including amelioration of urban heat island effects and storm water management. Tree species vary in the magnitude and seasonality of transpiration owing to differences in physiology, response to climate, and biophysical characteristics, thereby complicating efforts to manage evapotranspiration at city scales. We report sap flux measurements during the 2007 and 2008 growing seasons for dominant tree species in a suburban neighborhood of Minneapolis-Saint Paul, Minnesota, USA. Evergreen needleleaf trees had significantly higher growing season means and annual transpiration per unit canopy area (1.90 kg H2O m-2 d-1 and 307 kg H2O m-2 yr-1, respectively) than deciduous broadleaf trees (1.11 kg H2O m-2 d-1 and 153 kg H2O m-2 yr-1, respectively) because of a smaller projected canopy area (31.1 and 73.6 m2, respectively), a higher leaf area index (8.8 and 5.5 m2 m-2, respectively), and a longer growth season (8 and 4 months, respectively). Measurements also showed patterns consistent with the species' differences in xylem anatomy (conifer, ring porous, and diffuse porous). As the growing season progressed, conifer and diffuse porous genera had increased stomatal regulation to high vapor pressure deficit, while ring porous genera maintained greater and more constant stomatal regulation. These results suggest that evaporative responses to climate change in urban ecosystems will depend in part on species composition. Overall, plant functional type differences in canopy structure and growing season length were most important in explaining species' differences in midsummer and annual transpiration, offering an approach to predicting the evapotranspiration component of urban water budgets.

Modular tree automata

DEFF Research Database (Denmark)

Bahr, Patrick

2012-01-01

Tree automata are traditionally used to study properties of tree languages and tree transformations. In this paper, we consider tree automata as the basis for modular and extensible recursion schemes. We show, using well-known techniques, how to derive from standard tree automata highly modular...

Rate of tree carbon accumulation increases continuously with tree size.

Science.gov (United States)

Stephenson, N L; Das, A J; Condit, R; Russo, S E; Baker, P J; Beckman, N G; Coomes, D A; Lines, E R; Morris, W K; Rüger, N; Alvarez, E; Blundo, C; Bunyavejchewin, S; Chuyong, G; Davies, S J; Duque, A; Ewango, C N; Flores, O; Franklin, J F; Grau, H R; Hao, Z; Harmon, M E; Hubbell, S P; Kenfack, D; Lin, Y; Makana, J-R; Malizia, A; Malizia, L R; Pabst, R J; Pongpattananurak, N; Su, S-H; Sun, I-F; Tan, S; Thomas, D; van Mantgem, P J; Wang, X; Wiser, S K; Zavala, M A

2014-03-06

Forests are major components of the global carbon cycle, providing substantial feedback to atmospheric greenhouse gas concentrations. Our ability to understand and predict changes in the forest carbon cycle--particularly net primary productivity and carbon storage--increasingly relies on models that represent biological processes across several scales of biological organization, from tree leaves to forest stands. Yet, despite advances in our understanding of productivity at the scales of leaves and stands, no consensus exists about the nature of productivity at the scale of the individual tree, in part because we lack a broad empirical assessment of whether rates of absolute tree mass growth (and thus carbon accumulation) decrease, remain constant, or increase as trees increase in size and age. Here we present a global analysis of 403 tropical and temperate tree species, showing that for most species mass growth rate increases continuously with tree size. Thus, large, old trees do not act simply as senescent carbon reservoirs but actively fix large amounts of carbon compared to smaller trees; at the extreme, a single big tree can add the same amount of carbon to the forest within a year as is contained in an entire mid-sized tree. The apparent paradoxes of individual tree growth increasing with tree size despite declining leaf-level and stand-level productivity can be explained, respectively, by increases in a tree's total leaf area that outpace declines in productivity per unit of leaf area and, among other factors, age-related reductions in population density. Our results resolve conflicting assumptions about the nature of tree growth, inform efforts to undertand and model forest carbon dynamics, and have additional implications for theories of resource allocation and plant senescence.

Neoendemism in Madagascan scaly tree ferns results from recent, coincident diversification bursts.

Science.gov (United States)

Janssen, Thomas; Bystriakova, Nadia; Rakotondrainibe, France; Coomes, David; Labat, Jean-Noël; Schneider, Harald

2008-08-01

More than 80% of Madagascar's 12,000 plant species are endemic with the degree of endemism reaching as much as 95% in the scaly tree ferns, an important species rich component of Madagascar's evergreen rainforests. Predominantly African or Asian ancestry and divergence times usually postdating the separation of Madagascar from the Gondwanan landmasses have been demonstrated for several Madagascan animal and angiosperm groups. However, evolutionary studies of rainforest-specific lineages are scarce and the ecological context of radiation events has rarely been investigated. Here, we examine the evolution of Madagascan tree ferns as a rainforest-specific model family, integrate results from bioclimatic niche analysis with a dated phylogenetic framework, and propose an evolutionary scenario casting new light on our knowledge of the evolution of large island endemic clades. We show that Madagascar's extant tree fern diversity springs from three distinct ancestors independently colonizing Madagascar in the Miocene and that these three monophyletic clades diversified in three coincident radiation bursts during the Pliocene, reaching exceptionally high diversification rates and most likely responding to a common climatic trigger. Recent diversification bursts may thus have played a major role in the evolution of the extant Madagascan rainforest biome, which hence contains a significant number of young, neoendemic taxa.

Limitantes físicos y bióticos de la regeneración arbórea en matorrales sucesionales de la Isla Grande de Chiloé, Chile Physical and biotic constraints on tree regeneration in secondary shrublands of Chiloé Island, Chile

Directory of Open Access Journals (Sweden)

MARÍA F DÍAZ

2007-03-01

Full Text Available Los matorrales sucesionales establecidos después de la corta y quema de bosques son frecuentes en Chiloé y territorios continentales vecinos. Estos sitios son dominados por arbustos de Baccharis patagonica, musgos en cojín del género Sphagnum, plantas palustres y helechos. En estos sitios hemos registrado escasa o nula colonización arbórea (Successional shrublands created by clearcutting and burning of forests are frequent in Chiloé Island and surrounding mainland in southern Chile. These areas are characterized by seasonally waterlogged soils, and vegetation dominated by sedges, ferns and shrubs, such as Baccharis patagonica, with thick carpets of Sphagnum moss occupying the spaces between shrubs. Tree regeneration in these sites was shown to be sparse or completely lacking (< 0.3 seedlings m-2 compared with 7.2 seedlings m-2 in adjacent forests. Colonization of shade-intolerant, pioneer trees may be reduced underneath Baccharis due to crown shading and on top of Sphagnum cushions, because of unfavorable conditions for tree establishment, including low pH and soil water saturation. We evaluated differences in germination rates among pioneer tree species grown in an experimental soil moisture gradient. Seed germination percentage was low for Drimys winteri and Nothofagus nitida unrelated to humidity conditions but differed between substrates (moss vs. soil. Embothrium had higher germination and survivorship when growing on Sphagnum cushions. We also monitored seedling survival of two pioneer tree species (Embothrium coccineum and Drimys winteri transplanted directly under Baccharis shrubs, in open areas, or on moss patches. Even though survivorship of Embothrium and Drimys under Baccharis was < 40 %, in one of the study sites, there were no differences between treatments. Waterlogged soils would constraint tree regeneration on successional shrublands due to a lack of elevated substrates. However, the presence of Sphagnum cushions favors

Seed dispersal increases local species richness and reduces spatial turnover of tropical tree seedlings.

Science.gov (United States)

Wandrag, Elizabeth M; Dunham, Amy E; Duncan, Richard P; Rogers, Haldre S

2017-10-03

Dispersal is thought to be a key process underlying the high spatial diversity of tropical forests. Just how important dispersal is in structuring plant communities is nevertheless an open question because it is very difficult to isolate dispersal from other processes, and thereby measure its effect. Using a unique situation, the loss of vertebrate seed dispersers on the island of Guam and their presence on the neighboring islands of Saipan and Rota, we quantify the contribution of vertebrate seed dispersal to spatial patterns of diversity of tree seedlings in treefall gaps. The presence of vertebrate seed dispersers approximately doubled seedling species richness within canopy gaps and halved species turnover among gaps. Our study demonstrates that dispersal plays a key role in maintaining local and regional patterns of diversity, and highlights the potential for ongoing declines in vertebrate seed dispersers to profoundly alter tropical forest composition.

A bijection between phylogenetic trees and plane oriented recursive trees

OpenAIRE

Prodinger, Helmut

2017-01-01

Phylogenetic trees are binary nonplanar trees with labelled leaves, and plane oriented recursive trees are planar trees with an increasing labelling. Both families are enumerated by double factorials. A bijection is constructed, using the respective representations a 2-partitions and trapezoidal words.

Rate of tree carbon accumulation increases continuously with tree size

Science.gov (United States)

Stephenson, N.L.; Das, A.J.; Condit, R.; Russo, S.E.; Baker, P.J.; Beckman, N.G.; Coomes, D.A.; Lines, E.R.; Morris, W.K.; Rüger, N.; Álvarez, E.; Blundo, C.; Bunyavejchewin, S.; Chuyong, G.; Davies, S.J.; Duque, Á.; Ewango, C.N.; Flores, O.; Franklin, J.F.; Grau, H.R.; Hao, Z.; Harmon, M.E.; Hubbell, S.P.; Kenfack, D.; Lin, Y.; Makana, J.-R.; Malizia, A.; Malizia, L.R.; Pabst, R.J.; Pongpattananurak, N.; Su, S.-H.; Sun, I-F.; Tan, S.; Thomas, D.; van Mantgem, P.J.; Wang, X.; Wiser, S.K.; Zavala, M.A.

2014-01-01

Forests are major components of the global carbon cycle, providing substantial feedback to atmospheric greenhouse gas concentrations. Our ability to understand and predict changes in the forest carbon cycle—particularly net primary productivity and carbon storage - increasingly relies on models that represent biological processes across several scales of biological organization, from tree leaves to forest stands. Yet, despite advances in our understanding of productivity at the scales of leaves and stands, no consensus exists about the nature of productivity at the scale of the individual tree, in part because we lack a broad empirical assessment of whether rates of absolute tree mass growth (and thus carbon accumulation) decrease, remain constant, or increase as trees increase in size and age. Here we present a global analysis of 403 tropical and temperate tree species, showing that for most species mass growth rate increases continuously with tree size. Thus, large, old trees do not act simply as senescent carbon reservoirs but actively fix large amounts of carbon compared to smaller trees; at the extreme, a single big tree can add the same amount of carbon to the forest within a year as is contained in an entire mid-sized tree. The apparent paradoxes of individual tree growth increasing with tree size despite declining leaf-level and stand-level productivity can be explained, respectively, by increases in a tree’s total leaf area that outpace declines in productivity per unit of leaf area and, among other factors, age-related reductions in population density. Our results resolve conflicting assumptions about the nature of tree growth, inform efforts to understand and model forest carbon dynamics, and have additional implications for theories of resource allocation and plant senescence.

Tuppiap Qeqertaa (Tobias Island): a newly discovered island off northeast Greenland

DEFF Research Database (Denmark)

Bennike, O.; Mikkelsen, N.; Forsberg, René

2006-01-01

The small island of Tuppiap Qeqertaa, formerly known as Tobias circle divide or Tobias Island, is situated 80 km off the northeast Greenland coast. The island was discovered in 1993 and is approximately 2 km long and 1.5 km wide. Most of the island is covered by an ice cap that rises to 35 in abo...

Diomede Islands, Bering Straight

Science.gov (United States)

2008-01-01

The Diomede Islands consisting of the western island Big Diomede (also known as Imaqliq, Nunarbuk or Ratmanov Island), and the eastern island Little Diomede (also known as Krusenstern Island or Inaliq), are two rocky islands located in the middle of the Bering Strait between Russia and Alaska. The islands are separated by an international border and the International Date Line which is approximately 1.5 km from each island; you can look from Alaska into tomorrow in Russia. At the closest land approach between the United States, which controls Little Diomede, and Russia, which controls Big Diomede, they are 3 km apart. Little Diomede Island constitutes the Alaskan City of Diomede, while Big Diomede Island is Russia's easternmost point. The first European to reach the islands was the Russian explorer Semyon Dezhnev in 1648. The text of the 1867 treaty finalizing the sale of Alaska uses the islands to designate the border between the two nations. The image was acquired July 8, 2000, covers an area of 13.5 x 10.8 km, and is located at 65.8 degrees north latitude, 169 degrees west longitude. The U.S. science team is located at NASA's Jet Propulsion Laboratory, Pasadena, Calif. The Terra mission is part of NASA's Science Mission Directorate.

Sociodemographic Factors Influencing Island Food Consumption in the Pacific Islander Health Study

OpenAIRE

Baumhofer, Nicole Kau'i

2016-01-01

This dissertation explores the relationships between island food consumption, sociodemographic variables, and cardiovascular risk using data from the Pacific Islander Health Study (PIHS). Chapter 1 explores the associations between self-reported level of island food consumption and key covariates. Island food consumption was modeled using Poisson regression and adjusted for demographic, socioeconomic, and cultural characteristics. Increased Pacific Island cultural affinity was the strongest p...

Paradise Islands? Island States and Environmental Performance

Directory of Open Access Journals (Sweden)

Sverker C. Jagers

2016-03-01

Full Text Available Island states have been shown to outperform continental states on a number of large-scale coordination-related outcomes, such as levels of democracy and institutional quality. The argument developed and tested in this article contends that the same kind of logic may apply to islands’ environmental performance, too. However, the empirical analysis shows mixed results. Among the 105 environmental outcomes that we analyzed, being an island only has a positive impact on 20 of them. For example, island states tend to outcompete continental states with respect to several indicators related to water quality but not in aspects related to biodiversity, protected areas, or environmental regulations. In addition, the causal factors previously suggested to make islands outperform continental states in terms of coordination have weak explanatory power in predicting islands’ environmental performance. We conclude the paper by discussing how these interesting findings can be further explored.

Forest soil survey and mapping of the nutrient status of the vegetation on Olkiluoto island. Results from the first inventory on the FEH plots

International Nuclear Information System (INIS)

Tamminen, P.; Aro, A.; Salemaa, M.

2007-09-01

The aim of the inventory was to determine the status of the forest soils and to map the current nutrient status of forest vegetation on Olkiluoto Island in order to create a basis for monitoring future changes in the forests and to provide data for a biospheric description of the island. The study was carried out on 94 FEH plots, which were selected from the forest extensive monitoring network (FET plots) on the basis of the forest site type distribution and tree stand characteristics measured on the island during 2002 - 2004. Forest soils on Olkiluoto are very young and typical of soils along the Finnish coast, i.e. stony or shallow soils overlying bedrock, but with more nutrients than the forest soils inland. In addition to nutrients, the heavy metal concentrations are clearly higher on Olkiluoto than the average values for Finnish forest soils. The soil in the alder stands growing along the seashore is different from the other soils on Olkiluoto and the control soils inland. These soils are less acidic and have large reserves of sodium, magnesium and nitrogen. Macronutrient concentrations in vascular plant species were relatively similar to those reported for Southern Finland. However, it is obvious that the accumulation of particulate material on the vegetation, especially on forest floor bryophytes, has increased due to emissions derived from the construction of roads, drilling and rock crushing, as well as the other industrial activities on Olkiluoto Island. Leaf and needle analysis indicated that the tree stands had, in the main, a good nutrient status on Olkiluoto Island. The surveying methods used on Olkiluoto are better suited to detect systematic changes over a larger area or within a group of sample plots than the changes on individual plots. (orig.)

The urban forest and ecosystem services: impact on urban water, heat, and pollution cycles at the tree, street, and city scale

Science.gov (United States)

S. J. Livesley; E. G. McPherson; C. Calfapietra

2016-01-01

Many environmental challenges are exacerbated within the urban landscape, such as stormwater runoff and flood risk, chemical and particulate pollution of urban air, soil and water, the urban heat island, and summer heat waves. Urban trees, and the urban forest as a whole, can be managed to have an impact on the urban water, heat, carbon and pollution cycles. However,...

Divergence times and colonization of the Canary Islands by Gallotia lizards.

Science.gov (United States)

Cox, Siobhan C; Carranza, Salvador; Brown, Richard P

2010-08-01

The Canary Islands have become a model region for evolutionary studies. We obtained 1.8 Kbp of mtDNA sequence from all known island forms of the endemic lizard genus Gallotia and from its sister taxon Psammodromus in order to reanalyze phylogenetic relationships within the archipelago, estimate lineage divergence times, and reconstruct the colonization history of this group. Well-supported phylogenies were obtained using maximum parsimony and Bayesian inference. Previous studies have been unable to establish the branching pattern at the base of the tree. We found evidence that G. stehlini (Gran Canaria) originated from the most basal Gallotia node and G. atlantica from the subsequent node. Divergence times were estimated under a global clock using Bayesian Markov Chain Monte Carlo methods implemented by three different programs: BEAST, MCMCTREE, MULTIDIVTIME. Node constraints were derived from subaerial island appearance data and were incorporated into the analyses as soft or hard maximal bounds. Posterior node ages differed slightly between programs, possibly due to different priors on divergence times. The most eastern Canary Islands first emerged just over 20 mya and their colonization appears to have taken place relatively quickly, around 17-20 mya. The subsequent node is consistent with cladogenesis due to colonization of Gran Canaria from the eastern islands about 11-13 mya. The western islands appear to have been colonized by a dispersal event from Lanzarote/Fuerteventura in the east to either La Gomera or one of the ancient edifices that subsequently formed Tenerife in the west, about 9-10 mya. Within the western islands, the most recent node that is ancestral to both the G. intermedia/G. gomerana/G. simonyi and the G.galloti/G. caesaris clades is dated at about 5-6 mya. Subsequent dispersal events between ancient Tenerife islands and La Gomera are dated at around 3 mya in both clades, although the direction of dispersal cannot be determined. Finally, we

Totally James

Science.gov (United States)

Owens, Tom

2006-01-01

This article presents an interview with James Howe, author of "The Misfits" and "Totally Joe". In this interview, Howe discusses tolerance, diversity and the parallels between his own life and his literature. Howe's four books in addition to "The Misfits" and "Totally Joe" and his list of recommended books with lesbian, gay, bisexual, transgender,…

IcyTree: rapid browser-based visualization for phylogenetic trees and networks.

Science.gov (United States)

Vaughan, Timothy G

2017-08-01

IcyTree is an easy-to-use application which can be used to visualize a wide variety of phylogenetic trees and networks. While numerous phylogenetic tree viewers exist already, IcyTree distinguishes itself by being a purely online tool, having a responsive user interface, supporting phylogenetic networks (ancestral recombination graphs in particular), and efficiently drawing trees that include information such as ancestral locations or trait values. IcyTree also provides intuitive panning and zooming utilities that make exploring large phylogenetic trees of many thousands of taxa feasible. IcyTree is a web application and can be accessed directly at http://tgvaughan.github.com/icytree . Currently supported web browsers include Mozilla Firefox and Google Chrome. IcyTree is written entirely in client-side JavaScript (no plugin required) and, once loaded, does not require network access to run. IcyTree is free software, and the source code is made available at http://github.com/tgvaughan/icytree under version 3 of the GNU General Public License. tgvaughan@gmail.com. © The Author(s) 2017. Published by Oxford University Press.

Structural Complexity and Ecosystem Functions in a Natural Mixed Forest under a Single-Tree Selection Silviculture

Directory of Open Access Journals (Sweden)

Toshiya Yoshida

2017-11-01

Full Text Available The objective of forest management has become broader, and it is essential to harmonize timber production with conservation of the forest ecosystem. Selection cutting is recognized as a major alternative of clear-cutting, because it can maintain the complexity and heterogeneity of a natural forest; however, its long-term evaluations are limited. This study compared various attributes of stand structures, which are indicators of biodiversity and ecosystem carbon stock between managed and unmanaged blocks (12.6 ha area in total in a natural mixed forest in Hokkaido, the northernmost island of Japan. We found that 30 years’ implementation of single-tree selection did not affect the volume, size structure, species diversity nor spatial distribution of overstory trees in the managed stands. Also, the total carbon stock in the managed stands was almost equal to that of the unmanaged stands. In contrast, several structural attributes and indicator elements that are significant for biodiversity (such as large-diameter live trees, dead trees, cavities, epiphytic bryophytes, and some avian guilds showed marked decrease in the managed stands. We conclude that it is required to leave these structures and elements to some extent for deriving the merit of the management as an alternative silvicultural regime in the region.

Preventing establishment: an inventory of introduced plants in Puerto Villamil, Isabela Island, Galapagos.

Directory of Open Access Journals (Sweden)

Anne Guézou

Full Text Available As part of an island-wide project to identify and eradicate potentially invasive plant species before they become established, a program of inventories is being carried out in the urban and agricultural zones of the four inhabited islands in Galapagos. This study reports the results of the inventory from Puerto Villamil, a coastal village representing the urban zone of Isabela Island. We visited all 1193 village properties to record the presence of the introduced plants. In addition, information was collected from half of the properties to determine evidence for potential invasiveness of the plant species. We recorded 261 vascular taxa, 13 of which were new records for Galapagos. Most of the species were intentionally grown (cultivated (73.3% and used principally as ornamentals. The most frequent taxa we encountered were Cocos nucifera (coconut tree (22.1% as a cultivated plant and Paspalum vaginatum (salt water couch (13.2% as a non cultivated plant. In addition 39 taxa were naturalized. On the basis of the invasiveness study, we recommend five species for eradication (Abutilon dianthum, Datura inoxia, Datura metel, Senna alata and Solanum capsicoides, one species for hybridization studies (Opuntia ficus-indica and three species for control (Furcraea hexapetala, Leucaena leucocephala and Paspalum vaginatum.

Preventing Establishment: An Inventory of Introduced Plants in Puerto Villamil, Isabela Island, Galapagos

Science.gov (United States)

Guézou, Anne; Pozo, Paola; Buddenhagen, Christopher

2007-01-01

As part of an island-wide project to identify and eradicate potentially invasive plant species before they become established, a program of inventories is being carried out in the urban and agricultural zones of the four inhabited islands in Galapagos. This study reports the results of the inventory from Puerto Villamil, a coastal village representing the urban zone of Isabela Island. We visited all 1193 village properties to record the presence of the introduced plants. In addition, information was collected from half of the properties to determine evidence for potential invasiveness of the plant species. We recorded 261 vascular taxa, 13 of which were new records for Galapagos. Most of the species were intentionally grown (cultivated) (73.3%) and used principally as ornamentals. The most frequent taxa we encountered were Cocos nucifera (coconut tree) (22.1%) as a cultivated plant and Paspalum vaginatum (salt water couch) (13.2%) as a non cultivated plant. In addition 39 taxa were naturalized. On the basis of the invasiveness study, we recommend five species for eradication (Abutilon dianthum, Datura inoxia, Datura metel, Senna alata and Solanum capsicoides), one species for hybridization studies (Opuntia ficus-indica) and three species for control (Furcraea hexapetala, Leucaena leucocephala and Paspalum vaginatum). PMID:17940606

TreeScaper: Visualizing and Extracting Phylogenetic Signal from Sets of Trees.

Science.gov (United States)

Huang, Wen; Zhou, Guifang; Marchand, Melissa; Ash, Jeremy R; Morris, David; Van Dooren, Paul; Brown, Jeremy M; Gallivan, Kyle A; Wilgenbusch, Jim C

2016-12-01

Modern phylogenomic analyses often result in large collections of phylogenetic trees representing uncertainty in individual gene trees, variation across genes, or both. Extracting phylogenetic signal from these tree sets can be challenging, as they are difficult to visualize, explore, and quantify. To overcome some of these challenges, we have developed TreeScaper, an application for tree set visualization as well as the identification of distinct phylogenetic signals. GUI and command-line versions of TreeScaper and a manual with tutorials can be downloaded from https://github.com/whuang08/TreeScaper/releases TreeScaper is distributed under the GNU General Public License. © The Author 2016. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

Mechanisms of Forest Restoration in Landslide Treatment Areas

Directory of Open Access Journals (Sweden)

Yi-Chang Chen

2014-09-01

Full Text Available Reforestation after a landslide facilitates competition between herbaceous plants and arborous plants. Tangible variations in grassland areas in regions susceptible to landslides can only be found within collections of trees. A landslide area in the Sule Watershed was investigated. Relative illuminance results reveal that the Rhodes grass (Chloris gayana Kunth biomass in this landslide area increases with relative illuminance. A comparison of regions with tree islands indicates that the size of the grassland areas decreased and the number of tree islands increased during 2005–2010. Furthermore, a germination experiment in a soil-seed bank indicates that more woody plant species exist around the tree island than in other areas in the landslide region. Trees in a tree island change the micro-climate of the landslide region, and they gather as many nutrients and as much moisture as possible, enabling vegetation to expand around the tree island. Additionally, the area with Rhodes grass and its biomass declined annually in the tree island region. Investigation results show that tree islands and soil-seed banks are suited to reforestation in landslide regions. The pioneering research will assist regional landslide management in Taiwan.

Flowering Trees

Indian Academy of Sciences (India)

IAS Admin

Flowering Trees. Ailanthus excelsa Roxb. (INDIAN TREE OF. HEAVEN) of Simaroubaceae is a lofty tree with large pinnately compound alternate leaves, which are ... inflorescences, unisexual and greenish-yellow. Fruits are winged, wings many-nerved. Wood is used in making match sticks. 1. Male flower; 2. Female flower.

Temporal dynamics of tree source water in sky island ecosystems with ephemeral snow pack: a case study using Pseudotsuga menziesii (Douglas Fir)

Science.gov (United States)

Papuga, S. A.; Hamann, L.

2017-12-01

In semiarid regions, such as the desert southwest, water is a scarce resource that demands careful attention to its movement throughout the environment for accurate accounting in regional water budgets. Ephemeral snow pack in sky island ecosystems delivers a large fraction of the water resources to communities lower in the watershed. Because the major source of loss to those water resources is evapotranspiration (ET), any change in ET in these ecosystems will have major implications downstream. Climate scientists predict more intense and less frequent precipitation events in the desert southwest, which will alter the existing soil-plant-atmosphere continuum (SPAC). Therefore, understanding how water currently moves within that continuum is imperative in preparing for these predicted changes. This study used stable isotopes (δ18O and δD) to study the SPAC that exists in the Santa Catalina Mountain Critical Zone Observatory (SCM-CZO) to determine where the dominant tree species (Pseudotsuga menziesii, a.k.a., Douglas Fir) retrieves its water from and whether that source varies with season. We hypothesize that the Douglas Fir uses shallow soil water (season and deeper soil water (> 40 cm) during the snowmelt season. The findings of this work will help to better account for water losses due to ET and the movement of water throughout the environment. With a shift in the SPAC dynamics, the Douglas Fir may become increasingly water stressed effecting its ability to survive in the desert southwest which will have important consequences for water resources in this region.

Unintentional injury prevention and the role of occupational therapy in the Solomon Islands: an integrative review.

Science.gov (United States)

Daufanamae, Barbara U; Franklin, Richard C; Eagers, Jackie

2016-01-01

Unintentional injuries (injuries for which there is no evidence of a predetermined intent) are one of the leading causes of death worldwide, particularly in low- and middle-income countries (LMICs). Although evidence demonstrates unintentional injuries are preventable it is a public health challenge for many LMICs such as the Solomon Islands. Occupational therapists are well placed to contribute to injury prevention, as they have specialised skills to analyse the accessibility and safety of the environments within which people conduct their daily occupations. While the role of occupational therapy in unintentional injury prevention is well known in high-income countries, it is unfamiliar in LMICs, especially in the Solomon Islands. This integrative review aimed to explore the incidence of common unintentional injuries, and the burden in the Solomon Islands; and explore the potential role of occupational therapy in unintentional injury prevention in the Solomon Islands, based on current activities in LMICs. Articles were reviewed from six databases (Medline, CINAHL, OTDBase, OT Seeker, Scopus and PsychInfo). Five articles met the inclusion criteria for the first objective and 15 articles met the inclusion criteria for the second objective. These articles were thematically analysed where themes and codes associated with the research objectives were extracted and analysed. Unintentional injuries in the Solomon Islands reported in the literature included ocular trauma, falls from fruit trees and coconut palms, and road traffic crashes. Burden of injury reported was mostly associated with loss of productivity. Occupational therapists undertook rehabilitative, biomechanical, neurodevelopmental and educational roles in LMIC, focusing on tertiary and secondary injury prevention. This integrative review suggests that there is limited information regarding injury in the Solomon Islands. However, evidence is available in LMICs to suggest that occupational therapy services can

Analysis of seafloor change around Dauphin Island, Alabama, 1987–2015

Science.gov (United States)

Flocks, James G.; DeWitt, Nancy T.; Stalk, Chelsea A.

2017-09-26

Dauphin Island is a 26-km-long barrier island located southwest of Mobile Bay, Alabama, in the north-central Gulf of Mexico. The island contains sandy beaches, dunes, maritime forests, freshwater ponds and intertidal wetlands, providing habitat for many endangered and threatened species. Dauphin Island also provides protection for and maintains estuarine conditions within Mississippi Sound, supporting oyster habitat and seagrasses. Wetland marshes along the Alabama mainland are protected by the island from wave-induced erosion during storms approaching from the Gulf of Mexico. Over the years, the island has been eroded by storms, most recently by Hurricane Ivan (2004) and Hurricane Katrina (2005) (Ivan/Katrina), which breached the island along its narrowest extent and caused damage to infrastructure. Along with storms producing significant episodic change, long-term beach erosion has exposed numerous pine tree stumps in the shoreface. The stumps are remnants of past maritime forests and reflect the consistent landward retreat of the island.Island change has prompted the State of Alabama to evaluate restoration alternatives to increase island resilience and sustainability by protecting and preserving the natural habitat, and by understanding the processes that influence shoreline change. Under a grant from the National Fish and Wildlife Foundation, restoration alternatives are being developed that will allow the State to make decisions on engineering and ecological restoration designs based on scientific analysis of likely outcomes and tradeoffs between impacts to stakeholder interests. Science-based assessment of the coastal zone requires accurate and up-to-date baseline data to provide a valid image of present conditions and to support modeling of coastal processes. Bathymetric elevation measurements are essential to this requirement. In August 2015, the U.S. Army Corps of Engineers and the U.S. Geological Survey conducted single beam and multibeam bathymetric

Why do trees die? Characterizing the drivers of background tree mortality

Science.gov (United States)

Das, Adrian J.; Stephenson, Nathan L.; Davis, Kristin P.

2016-01-01

The drivers of background tree mortality rates—the typical low rates of tree mortality found in forests in the absence of acute stresses like drought—are central to our understanding of forest dynamics, the effects of ongoing environmental changes on forests, and the causes and consequences of geographical gradients in the nature and strength of biotic interactions. To shed light on factors contributing to background tree mortality, we analyzed detailed pathological data from 200,668 tree-years of observation and 3,729 individual tree deaths, recorded over a 13-yr period in a network of old-growth forest plots in California's Sierra Nevada mountain range. We found that: (1) Biotic mortality factors (mostly insects and pathogens) dominated (58%), particularly in larger trees (86%). Bark beetles were the most prevalent (40%), even though there were no outbreaks during the study period; in contrast, the contribution of defoliators was negligible. (2) Relative occurrences of broad classes of mortality factors (biotic, 58%; suppression, 51%; and mechanical, 25%) are similar among tree taxa, but may vary with tree size and growth rate. (3) We found little evidence of distinct groups of mortality factors that predictably occur together on trees. Our results have at least three sets of implications. First, rather than being driven by abiotic factors such as lightning or windstorms, the “ambient” or “random” background mortality that many forest models presume to be independent of tree growth rate is instead dominated by biotic agents of tree mortality, with potentially critical implications for forecasting future mortality. Mechanistic models of background mortality, even for healthy, rapidly growing trees, must therefore include the insects and pathogens that kill trees. Second, the biotic agents of tree mortality, instead of occurring in a few predictable combinations, may generally act opportunistically and with a relatively large degree of independence from

Researching Pacific island livelihoods:

DEFF Research Database (Denmark)

Egelund Christensen, Andreas; Mertz, Ole

2010-01-01

on contemporary theories of nissology and conceptual analytical frameworks for island research. Through a review of selected case-study-based island literature on changing livelihoods coming out of the South Pacific, we wish to illustrate and discuss advantages of finding common grounds for small island studies....... The focus is on two dimensions of island livelihood, migration and natural resource management, both of which are significant contributors in making island livelihoods and shaping Pacific seascapes. We argue that there is still a substantial lack of studies targeting small island dynamics that are empirical...

Flowering Trees

Indian Academy of Sciences (India)

Flowering Trees. Gyrocarpus americanus Jacq. (Helicopter Tree) of Hernandiaceae is a moderate size deciduous tree that grows to about 12 m in height with a smooth, shining, greenish-white bark. The leaves are ovate, rarely irregularly ... flowers which are unpleasant smelling. Fruit is a woody nut with two long thin wings.

Natural regeneration in abandoned fields following intensive agricultural land use in an Atlantic Forest Island, Brazil

Directory of Open Access Journals (Sweden)

Milene Silvestrini

2012-08-01

Full Text Available The time required to regrowth a forest in degraded areas depends on how the forest is removed and on the type of land use following removal. Natural regeneration was studied in abandoned old fields after intensive agricultural land use in areas originally covered by Brazilian Atlantic Forests of the Anchieta Island, Brazil in order to understand how plant communities reassemble following human disturbances as well as to determine suitable strategies of forest restoration. The fields were classified into three vegetation types according to the dominant plant species in: 1 Miconia albicans (Sw. Triana (Melastomataceae fields, 2 Dicranopteris flexuosa (Schrader Underw. (Gleicheniaceae thickets, and 3 Gleichenella pectinata (Willd. Ching. (Gleicheniaceae thickets. Both composition and structure of natural regeneration were compared among the three dominant vegetation types by establishing randomly three plots of 1 x 3 m in five sites of the island. A gradient in composition and abundance of species in natural regeneration could be observed along vegetation types from Dicranopteris fern thickets to Miconia fields. The gradient did not accurately follow the pattern of spatial distribution of the three dominant vegetation types in the island regarding their proximity of the remnant forests. A complex association of biotic and abiotic factors seems to be affecting the seedling recruitment and establishment in the study plots. The lowest plant regeneration found in Dicranopteris and Gleichenella thickets suggests that the ferns inhibit the recruitment of woody and herbaceous species. Otherwise, we could not distinguish different patterns of tree regeneration among the three vegetation types. Our results showed that forest recovery following severe anthropogenic disturbances is not direct, predictable or even achievable on its own. Appropriated actions and methods such as fern removal, planting ground covers, and enrichment planting with tree species were

78 FR 63860 - Amendment of Class D Airspace; Kwajalein Island, Marshall Islands, RMI

Science.gov (United States)

2013-10-25

...This action amends the Kwajalein Island Class D airspace description by amending the geographic coordinates for Bucholz Army Airfield (AAF), Kwajalein Island, Marshall Islands, RMI. The Bucholz AAF geographic coordinates information was updated in the Kwajalein Island Class E airspace descriptions in 2011, but was inadvertently overlooked in the Kwajalein Island Class D airspace description. This action ensures the safety of aircraft operating in the Kwajalein Island airspace area. This is an administrative action and does not affect the operating requirements of the airspace.

Cache-Oblivious Search Trees via Binary Trees of Small Height

DEFF Research Database (Denmark)

Brodal, G.S.; Fagerberg, R.; Jacob, R.

2002-01-01

We propose a version of cache oblivious search trees which is simpler than the previous proposal of Bender, Demaine and Farach-Colton and has the same complexity bounds. In particular, our data structure avoids the use of weight balanced B-trees, and can be implemented as just a single array......, and range queries in worst case O(logB n + k/B) memory transfers, where k is the size of the output.The basic idea of our data structure is to maintain a dynamic binary tree of height log n+O(1) using existing methods, embed this tree in a static binary tree, which in turn is embedded in an array in a cache...... oblivious fashion, using the van Emde Boas layout of Prokop.We also investigate the practicality of cache obliviousness in the area of search trees, by providing an empirical comparison of different methods for laying out a search tree in memory....

Flowering Trees

Indian Academy of Sciences (India)

Flowering Trees. Boswellia serrata Roxb. ex Colebr. (Indian Frankincense tree) of Burseraceae is a large-sized deciduous tree that is native to India. Bark is thin, greenish-ash-coloured that exfoliates into smooth papery flakes. Stem exudes pinkish resin ... Fruit is a three-valved capsule. A green gum-resin exudes from the ...

The role of one large greenspace in mitigating London's nocturnal urban heat island.

Science.gov (United States)

Doick, Kieron J; Peace, Andrew; Hutchings, Tony R

2014-09-15

The term urban heat island (UHI) describes a phenomenon where cities are on average warmer than the surrounding rural area. Trees and greenspaces are recognised for their strong potential to regulate urban air temperatures and combat the UHI. Empirical data is required in the UK to inform predictions on cooling by urban greenspaces and guide planning to maximise cooling of urban populations. We describe a 5-month study to measure the temperature profile of one of central London's large greenspaces and also in an adjacent street to determine the extent to which the greenspace reduced night-time UHI intensity. Statistical modelling displayed an exponential decay in the extent of cooling with increased distance from the greenspace. The extent of cooling ranged from an estimated 20 m on some nights to 440 m on other nights. The mean temperature reduction over these distances was 1.1 °C in the summer months, with a maximum of 4 °C cooling observed on some nights. Results suggest that calculation of London's UHI using Met Stations close to urban greenspace can underestimate 'urban' heat island intensity due to the cooling effect of the greenspace and values could be in the region of 45% higher. Our results lend support to claims that urban greenspace is an important component of UHI mitigation strategies. Lack of certainty over the variables that govern the extent of the greenspace cooling influence indicates that the multifaceted roles of trees and greenspaces in the UK's urban environment merit further consideration. Crown Copyright © 2014. Published by Elsevier B.V. All rights reserved.

Water cycle and salinity dynamics in the mangrove forests of Europa and Juan de Nova Islands, southwest Indian Ocean.

Science.gov (United States)

Lambs, Luc; Mangion, Perrine; Mougin, Eric; Fromard, François

2016-01-30

The functioning of mangrove forests found on small coralline islands is characterized by limited freshwater inputs. Here, we present data on the water cycling of such systems located on Europa and Juan de Nova Islands, Mozambique Channel. In order to better understand the water cycle and mangrove growth conditions, we have analysed the hydrological and salinity dynamics of the systems by gauge pressure and isotopic tracing (δ18O and δ2H values). Both islands have important seawater intrusion as measured by the water level change and the high salinities in the karstic ponds. Europa Island displays higher salinity stress, with its inner lagoon, but presents a pluri-specific mangrove species formation ranging from shrub to forest stands. No freshwater signal could be detected around the mangrove trees. On Juan de Nova Island, the presence of sand and detrital sediment allows the storage of some amount of rainfall to form a brackish groundwater. The mangrove surface area is very limited with only small mono-specific stands being present in karstic depression. On the drier Europa Island, the salinity of all the water points is equal to or higher than that of the seawater, and on Juan de Nova the groundwater salinity is lower (5 to 20 PSU). This preliminary study shows that the karstic pothole mangroves exist due to the sea connection through the fractured coral and the high tidal dynamics.

Pollution and Climate Effects on Tree-Ring Nitrogen Isotopes

Science.gov (United States)

Savard, M. M.; Bégin, C.; Marion, J.; Smirnoff, A.

2009-04-01

BACKGROUND Monitoring of nitrous oxide concentration only started during the last 30 years in North America, but anthropogenic atmospheric nitrogen has been significantly emitted over the last 150 years. Can geochemical characteristics of tree rings be used to infer past changes in the nitrogen cycle of temperate regions? To address this question we use nitrogen stable isotopes in 125 years-long ring series from beech specimens (Fagus grandifolia) of the Georgian Bay Islands National Park (eastern Ontario), and pine (Pinus strobus) and beech trees of the Arboretum Morgan near Montreal (western Quebec). To evaluate the reliability of the N stable isotopes in wood treated for removal of soluble materials, we tested both tree species from the Montreal area. The reproducibility from tree to tree was excellent for both pine and beech trees, the isotopic trends were strongly concordant, and they were not influenced by the heartwood-sapwood transition zone. The coherence of changes of the isotopic series observed for the two species suggests that their tree-ring N isotopic values can serve as environmental indicator. RESULTS AND INTERPRETATION In Montreal and Georgian Bay, the N isotopes show strong and similar parallel agreement (Gleichlaufigkeit test) with the climatic parameters. So in fact, the short-term isotopic fluctuations correlate directly with summer precipitation and inversely with summer and spring temperature. A long-term decreasing isotope trend in Montreal indicates progressive changes in soil chemistry after 1951. A pedochemical change is also inferred for the Georgian Bay site on the basis of a positive N isotopic trend initiated after 1971. At both sites, the long-term ^15N series correlate with a proxy for NOx emissions (Pearson correlation), and carbon-isotope ring series suggest that the same trees have been impacted by phytotoxic pollutants (Savard et al., 2009a). We propose that the contrasted long-term nitrogen-isotope changes of Montreal and

Etheliaceae fam. nov. (Gigartinales, Rhodophyta), with a clarification of the generitype of Ethelia and the addition of six novel species from warm waters.

Science.gov (United States)

Dixon, Kyatt R; Saunders, Gary W; Schneider, Craig W; Lane, Christopher E

2015-12-01

Based upon COI-5P, LSU rDNA, and rbcL sequence data and morphological characteristics, six new members of the noncalcified crustose genus of red algae Ethelia are described in a new family, Etheliaceae (Gigartinales), sister to the recently described Ptilocladiopsidaceae. The novel species are described from subtropical to tropical Atlantic and Indo-Pacific Ocean basins; E. mucronata sp. nov. and E. denizotii sp. nov. from southern and northern Western Australia respectively, E. wilcei sp. nov. from the Cocos (Keeling) Islands of Australia, E. suluensis sp. nov. from the Philippines, E. umbricola sp. nov. from Bermuda and E. kraftii sp. nov. from Lord Howe Island, Australia. The generitype, Ethelia biradiata, originally reported from the Seychelles, Indian Ocean, is added to the Western Australian flora. © 2015 Phycological Society of America.

Stepping-stones to the Edge: Artistic Expressions of Islandness in an Ocean of Islands

Directory of Open Access Journals (Sweden)

Laurie Brinklow

2013-05-01

Full Text Available Since the earliest of times, islands have captured the artistic imagination—and, often, for the artist who finds his or her muse in being ‘islanded’, the smaller the island the better. Archipelagos offer an ideal setting for artists who take their inspiration from place: on small islands off islands they can experience an intensity of island living they might not otherwise have on a main island: boundedness and connection, isolation and community. This paper examines expressions of islandness by artists who live on islands off islands that are poles apart—‘archipelagos’ of the Canadian North Atlantic and the Great Southern Ocean. It draws upon interviews with those artists and writers to consider the nature of humans’ attachment and attraction to islands, exploring through the lens of phenomenology what Stratford et al. call the “entanglement between and among islands”.

Bird populations on the Island of Tinian: persistence despite wholesale loss of native forests

Science.gov (United States)

Camp, Richard J.; Amidon, Frederick A.; Marshall, Ann P.; Pratt, Thane K.

2012-01-01

Bird habitat on the island of Tinian, Mariana Islands, has been substantially altered, and only around 5% of the island has native forest today. The modern bird fauna is likely to be a subset of the original avifauna where only species tolerant to native forest loss and human disturbance have survived. Avian surveys were conducted on the island in 2008 by the U.S. Fish and Wildlife Service to provide current densities and abundances of the remaining species, and assess population trends using data collected from previous surveys. During the three surveys (1982, 1996, and 2008), 18 species were detected, and abundances and trends were assessed for 11 species. Five of the nine native species and one alien bird have increased since 1982. Three native birds—Mariana Fruit-Dove (Ptilinopusroseicapilla), Micronesian Honeyeater (Myzomela rubratra), and Tinian Monarch (Monarcha takatsukasae)—have decreased since 1982. Trends for the remaining two birds (one native and one alien) were considered relatively stable. Only five birds, including the Tinian Monarch, showed significant differences among regions of Tinian by year. Increased development on Tinian may result in increases in habitat clearing and expansion of human-dominated habitats, and declines in some bird populations would likely continue or be exacerbated with these actions. Expanded development activities on Tinian would also mean increased cargo movement between Guam and Tinian, elevating the probability of transporting the Brown Tree Snake (Boiga irregularis) to Tinian, which would lead to precipitous decreases and extinctions.

Status and trends of the land bird avifauna on Tinian and Aguiguan, Mariana Islands

Science.gov (United States)

Camp, Richard J.; Pratt, Thane K.; Amidon, Fred; Marshall, Ann P.; Kremer, Shelly; Laut, Megan

2012-01-01

Avian surveys were conducted on the islands of Tinian and Aguiguan, Marianas Islands, in 2008 by the U.S. Fish and Wildlife Service to provide current baseline densities and abundances and assess population trends using data collected from previous surveys. On Tinian, during the three surveys (1982, 1996, and 2008), 18 species were detected, and abundances and trends were assessed for 12 species. Half of the 10 native species—Yellow Bittern (Ixobrychus sinensis), White-throated Ground-Dove (Gallicolumba xanthonura), Collared Kingfisher (Todiramphus chloris), Rufous Fantail (Rhipidura rufifrons), and Micronesian Starling (Aplonis opaca)—and one alien bird—Island Collared-Dove (Streptopelia bitorquata)—have increased since 1982. Three native birds—Mariana Fruit-Dove (Ptilinopus roseicapilla), Micronesian Honeyeater (Myzomela rubratra), and Tinian Monarch (Monarcha takatsukasae)—have decreased since 1982. Trends for the remaining two native birds—White Tern (Gygis alba) and Bridled White-eye (Zosterops saypani)—and one alien bird—Eurasian Tree Sparrow (Passer montanus)—were considered relatively stable. Only five birds—White-throated Ground-Dove, Mariana Fruit-Dove, Tinian Monarch, Rufous Fantail, and Bridled White-eye—showed significant differences among regions of Tinian by year. Tinian Monarch was found in all habitat types, with the greatest monarch densities observed in limestone forest, secondary forest, and tangantangan (Leucaena leucocephala) thicket and the smallest densities found in open fields and urban/residential habitats. On Aguiguan, 19 species were detected on one or both of the surveys (1982 and 2008), and abundance estimates were produced for nine native and one alien species. Densities for seven of the nine native birds—White-throated Ground-Dove, Mariana Fruit-Dove, Collared Kingfisher, Rufous Fantail, Bridled White-eye, Golden White-eye (Cleptornis marchei), and Micronesian Starling—and the alien bird— Island

Systolic trees and systolic language recognition by tree automata

Energy Technology Data Exchange (ETDEWEB)

Steinby, M

1983-01-01

K. Culik II, J. Gruska, A. Salomaa and D. Wood have studied the language recognition capabilities of certain types of systolically operating networks of processors (see research reports Cs-81-32, Cs-81-36 and Cs-82-01, Univ. of Waterloo, Ontario, Canada). In this paper, their model for systolic VLSI trees is formalised in terms of standard tree automaton theory, and the way in which some known facts about recognisable forests and tree transductions can be applied in VLSI tree theory is demonstrated. 13 references.

DupTree: a program for large-scale phylogenetic analyses using gene tree parsimony.

Science.gov (United States)

Wehe, André; Bansal, Mukul S; Burleigh, J Gordon; Eulenstein, Oliver

2008-07-01

DupTree is a new software program for inferring rooted species trees from collections of gene trees using the gene tree parsimony approach. The program implements a novel algorithm that significantly improves upon the run time of standard search heuristics for gene tree parsimony, and enables the first truly genome-scale phylogenetic analyses. In addition, DupTree allows users to examine alternate rootings and to weight the reconciliation costs for gene trees. DupTree is an open source project written in C++. DupTree for Mac OS X, Windows, and Linux along with a sample dataset and an on-line manual are available at http://genome.cs.iastate.edu/CBL/DupTree

Seasonal and altitudinal variation in roe deer (Capreolus pygargus tianschanicus) diet on Jeju Island, South Korea

OpenAIRE

Adhikari, Pradeep; Park, Seon-Mi; Kim, Tae-Wook; Lee, Jun-Won; Kim, Ga-Ram; Han, Sang-Hyun; Oh, Hong-Shik

2016-01-01

In order to understand the feeding ecology and dietary differences of roe deer (Capreolus pygargus tianschanicus) in different seasons and altitudes, this study was carried out at three altitudinal sites (Songdang 250–270 m above sea level (ASL), Aradong 330–370 m ASL, Mt. Hallasan 1100 m ASL) on Jeju Island, South Korea. Altogether, 205 plants taxa of six categories of foods (forbs-climbers, graminoids, trees, shrubs, conifers, and ferns) were identified using morphological and molecular ana...

Modeling the distribution of Norway rats (Rattus norvegicus on offshore islands in the Falkland Islands

Directory of Open Access Journals (Sweden)

Michael A. Tabak

2015-01-01

Full Text Available Non-native rats (Rattus spp. threaten native island species worldwide. Efforts to eradicate them from islands have increased in frequency and become more ambitious in recent years. However, the long-term success of some eradication efforts has been compromised by the ability of rats, particularly Norway rats (Rattus norvegicus which are good swimmers, to recolonize islands following eradications. In the Falkland Islands, an archipelago in the South Atlantic Ocean, the distance of 250 m between islands (once suggested as the minimum separation distance for an effective barrier to recolonization has shown to be insufficient. Norway rats are present on about half of the 503 islands in the Falklands. Bird diversity is lower on islands with rats and two vulnerable passerine species, Troglodytes cobbi (the only endemic Falkland Islands passerine and Cinclodes antarcticus, have greatly reduced abundances and/or are absent on islands with rats. We used logistic regression models to investigate the potential factors that may determine the presence of Norway rats on 158 islands in the Falkland Islands. Our models included island area, distance to the nearest rat-infested island, island location, and the history of island use by humans as driving variables. Models best supported by data included only distance to the nearest potential source of rats and island area, but the relative magnitude of the effect of distance and area on the presence of rats varied depending on whether islands were in the eastern or western sector of the archipelago. The human use of an island was not a significant parameter in any models. A very large fraction (72% of islands within 500 m of the nearest potential rat source had rats, but 97% of islands farther than 1,000 m away from potential rat sources were free of rats.

Usefulness of pioneer vegetation for the phytomanagement of metal(loid)s enriched tailings: grasses vs. shrubs vs. trees.

Science.gov (United States)

Parraga-Aguado, Isabel; Querejeta, Jose-Ignacio; González-Alcaraz, María-Nazaret; Jiménez-Cárceles, Francisco J; Conesa, Héctor M

2014-01-15

The goal of this work was to assess the selection of the most suitable combination of plant species for the phytomanagement of mine tailings, by comparing among different plant life-forms (grasses, shrubs and trees). A comparison on induced rhizosphere changes generated by four plant species (the grass Piptatherum miliaceum, the shrub Helichrysum decumbens, and the trees, Pinus halepensis and Tetraclinis articulata) and high density vegetation patches (fertility islands) at a mine tailing located at Southeast Spain and the description of their physiological status employing stable isotopes analyses were carried out. The edaphic niches for plant growth were determined by salinity, organic matter and total soil nitrogen while metal(loid)s concentrations played a minor role. Induced changes in plant rhizospheres had a significant impact in soil microbiology. While grasses and shrubs may play an important role in primary ecological succession, trees seem to be the key to the development of fertility islands. The low δ(15)N values (-8.00‰) in P. halepensis needles may reflect higher ectomycorrhizal dependence. Large differences in leaf δ(18)O among the plant species indicated contrasting and complementary water acquisition strategies. Leaf δ(13)C values (-27.6‰) suggested that T. articulata had higher water use efficiency than the rest of species (-29.9‰). The implement of a diverse set of plant species with contrasting life forms for revegetating tailings may result in a more efficient employment of water resources and a higher biodiversity not only in relation to flora but soil microbiology too. Copyright © 2013 Elsevier Ltd. All rights reserved.

33 CFR 80.717 - Tybee Island, GA to St. Simons Island, GA.

Science.gov (United States)

2010-07-01

... Island. (j) An east-west line from the southernmost extremity of Sea Island across Goulds Inlet to St... Tybee Island 255° true across Tybee Inlet to the shore of Little Tybee Island south of the entrance to... shoreline across Cabretta Inlet. (g) A north-south line (longitude 81°16.9′ W.) drawn from the south...

Energy Transition Initiative: Island Energy Snapshot - U.S. Virgin Islands (Fact Sheet)

Energy Technology Data Exchange (ETDEWEB)

2015-03-01

This profile provides a snapshot of the energy landscape of the U.S. Virgin Islands (USVI) - St. Thomas, St. John, and St. Croix. The Virgin Islands archipelago makes up the northern portion of the Lesser Antilles and the western island group of the Leeward Islands, forming the border between the Atlantic Ocean and the Caribbean Sea.

Flowering Trees

Indian Academy of Sciences (India)

More Details Fulltext PDF. Volume 8 Issue 8 August 2003 pp 112-112 Flowering Trees. Zizyphus jujuba Lam. of Rhamnaceae · More Details Fulltext PDF. Volume 8 Issue 9 September 2003 pp 97-97 Flowering Trees. Moringa oleifera · More Details Fulltext PDF. Volume 8 Issue 10 October 2003 pp 100-100 Flowering Trees.

Embedding complete ternary tree in hypercubes using AVL trees

NARCIS (Netherlands)

S.A. Choudum; I. Raman (Indhumathi)

2008-01-01

htmlabstractA complete ternary tree is a tree in which every non-leaf vertex has exactly three children. We prove that a complete ternary tree of height h, TTh, is embeddable in a hypercube of dimension . This result coincides with the result of [2]. However, in this paper, the embedding utilizes

Ghost-tree: creating hybrid-gene phylogenetic trees for diversity analyses.

Science.gov (United States)

Fouquier, Jennifer; Rideout, Jai Ram; Bolyen, Evan; Chase, John; Shiffer, Arron; McDonald, Daniel; Knight, Rob; Caporaso, J Gregory; Kelley, Scott T

2016-02-24

Fungi play critical roles in many ecosystems, cause serious diseases in plants and animals, and pose significant threats to human health and structural integrity problems in built environments. While most fungal diversity remains unknown, the development of PCR primers for the internal transcribed spacer (ITS) combined with next-generation sequencing has substantially improved our ability to profile fungal microbial diversity. Although the high sequence variability in the ITS region facilitates more accurate species identification, it also makes multiple sequence alignment and phylogenetic analysis unreliable across evolutionarily distant fungi because the sequences are hard to align accurately. To address this issue, we created ghost-tree, a bioinformatics tool that integrates sequence data from two genetic markers into a single phylogenetic tree that can be used for diversity analyses. Our approach starts with a "foundation" phylogeny based on one genetic marker whose sequences can be aligned across organisms spanning divergent taxonomic groups (e.g., fungal families). Then, "extension" phylogenies are built for more closely related organisms (e.g., fungal species or strains) using a second more rapidly evolving genetic marker. These smaller phylogenies are then grafted onto the foundation tree by mapping taxonomic names such that each corresponding foundation-tree tip would branch into its new "extension tree" child. We applied ghost-tree to graft fungal extension phylogenies derived from ITS sequences onto a foundation phylogeny derived from fungal 18S sequences. Our analysis of simulated and real fungal ITS data sets found that phylogenetic distances between fungal communities computed using ghost-tree phylogenies explained significantly more variance than non-phylogenetic distances. The phylogenetic metrics also improved our ability to distinguish small differences (effect sizes) between microbial communities, though results were similar to non

Trees are good, but…

Science.gov (United States)

E.G. McPherson; F. Ferrini

2010-01-01

We know that “trees are good,” and most people believe this to be true. But if this is so, why are so many trees neglected, and so many tree wells empty? An individual’s attitude toward trees may result from their firsthand encounters with specific trees. Understanding how attitudes about trees are shaped, particularly aversion to trees, is critical to the business of...

Multiple-purpose trees for pastoral farming in New Zealand: with emphasis on tree legumes. [Lucerne Tree: Medick Tree

Energy Technology Data Exchange (ETDEWEB)

Davies, D J.G.; Macfarlane, R P

1979-01-01

The potential for soil conservation and agroforestry of several native and exotic legumes is discussed. Flowering period, chemical composition of leaves/pods, hardiness to frost and drought, timber value, forage potential for livestock and bees, ornamental value and other products are tabulated with information on up to 38 species. Two low-growing species that have proved useful for slope stabilization as well as forage are tree lucerne (Cytisus palmensis) and tree medick (Medicago arborea), the latter being shrubby and more suitable for cold districts. Gleditsia triacanthos is recommended as a shade and fodder tree for farm pasture.

46 CFR 7.70 - Folly Island, SC to Hilton Head Island, SC.

Science.gov (United States)

2010-10-01

... 46 Shipping 1 2010-10-01 2010-10-01 false Folly Island, SC to Hilton Head Island, SC. 7.70 Section... BOUNDARY LINES Atlantic Coast § 7.70 Folly Island, SC to Hilton Head Island, SC. (a) A line drawn from the...′ W. (Port Royal Sound Lighted Whistle Buoy “2PR”); thence to the easternmost extremity of Hilton Head...

Shedding light on tree growth : ring analysis of juvenile tropical trees

NARCIS (Netherlands)

Soliz Gamboa, C.C.

2010-01-01

In the understory of tropical forests light is believed to be the main limiting growth factor for the newly established trees. Trees growing in shade of the understory may experience periods of slow radial growth. It is expected that gaps created by tree or branch fall will provoke tree growth

Inferring species trees from incongruent multi-copy gene trees using the Robinson-Foulds distance

Science.gov (United States)

2013-01-01

Background Constructing species trees from multi-copy gene trees remains a challenging problem in phylogenetics. One difficulty is that the underlying genes can be incongruent due to evolutionary processes such as gene duplication and loss, deep coalescence, or lateral gene transfer. Gene tree estimation errors may further exacerbate the difficulties of species tree estimation. Results We present a new approach for inferring species trees from incongruent multi-copy gene trees that is based on a generalization of the Robinson-Foulds (RF) distance measure to multi-labeled trees (mul-trees). We prove that it is NP-hard to compute the RF distance between two mul-trees; however, it is easy to calculate this distance between a mul-tree and a singly-labeled species tree. Motivated by this, we formulate the RF problem for mul-trees (MulRF) as follows: Given a collection of multi-copy gene trees, find a singly-labeled species tree that minimizes the total RF distance from the input mul-trees. We develop and implement a fast SPR-based heuristic algorithm for the NP-hard MulRF problem. We compare the performance of the MulRF method (available at http://genome.cs.iastate.edu/CBL/MulRF/) with several gene tree parsimony approaches using gene tree simulations that incorporate gene tree error, gene duplications and losses, and/or lateral transfer. The MulRF method produces more accurate species trees than gene tree parsimony approaches. We also demonstrate that the MulRF method infers in minutes a credible plant species tree from a collection of nearly 2,000 gene trees. Conclusions Our new phylogenetic inference method, based on a generalized RF distance, makes it possible to quickly estimate species trees from large genomic data sets. Since the MulRF method, unlike gene tree parsimony, is based on a generic tree distance measure, it is appealing for analyses of genomic data sets, in which many processes such as deep coalescence, recombination, gene duplication and losses as

Trees

Science.gov (United States)

Al-Khaja, Nawal

2007-01-01

This is a thematic lesson plan for young learners about palm trees and the importance of taking care of them. The two part lesson teaches listening, reading and speaking skills. The lesson includes parts of a tree; the modal auxiliary, can; dialogues and a role play activity.

Spectra of chemical trees

International Nuclear Information System (INIS)

Balasubramanian, K.

1982-01-01

A method is developed for obtaining the spectra of trees of NMR and chemical interests. The characteristic polynomials of branched trees can be obtained in terms of the characteristic polynomials of unbranched trees and branches by pruning the tree at the joints. The unbranched trees can also be broken down further until a tree containing just two vertices is obtained. The effectively reduces the order of the secular determinant of the tree used at the beginning to determinants of orders atmost equal to the number of vertices in the branch containing the largest number of vertices. An illustrative example of a NMR graph is given for which the 22 x 22 secular determinant is reduced to determinants of orders atmost 4 x 4 in just the second step of the algorithm. The tree pruning algorithm can be applied even to trees with no symmetry elements and such a factoring can be achieved. Methods developed here can be elegantly used to find if two trees are cospectral and to construct cospectral trees

MeshTree: A Delay optimised Overlay Multicast Tree Building Protocol

OpenAIRE

Tan, Su-Wei; Waters, A. Gill; Crawford, John

2005-01-01

We study decentralised low delay degree-constrained overlay multicast tree construction for single source real-time applications. This optimisation problem is NP-hard even if computed centrally. We identify two problems in traditional distributed solutions, namely the greedy problem and delay-cost trade-off. By offering solutions to these problems, we propose a new self-organising distributed tree building protocol called MeshTree. The main idea is to embed the delivery tree in a degree-bound...

Minimum variance rooting of phylogenetic trees and implications for species tree reconstruction.

Science.gov (United States)

Mai, Uyen; Sayyari, Erfan; Mirarab, Siavash

2017-01-01

Phylogenetic trees inferred using commonly-used models of sequence evolution are unrooted, but the root position matters both for interpretation and downstream applications. This issue has been long recognized; however, whether the potential for discordance between the species tree and gene trees impacts methods of rooting a phylogenetic tree has not been extensively studied. In this paper, we introduce a new method of rooting a tree based on its branch length distribution; our method, which minimizes the variance of root to tip distances, is inspired by the traditional midpoint rerooting and is justified when deviations from the strict molecular clock are random. Like midpoint rerooting, the method can be implemented in a linear time algorithm. In extensive simulations that consider discordance between gene trees and the species tree, we show that the new method is more accurate than midpoint rerooting, but its relative accuracy compared to using outgroups to root gene trees depends on the size of the dataset and levels of deviations from the strict clock. We show high levels of error for all methods of rooting estimated gene trees due to factors that include effects of gene tree discordance, deviations from the clock, and gene tree estimation error. Our simulations, however, did not reveal significant differences between two equivalent methods for species tree estimation that use rooted and unrooted input, namely, STAR and NJst. Nevertheless, our results point to limitations of existing scalable rooting methods.

Silvics of Native and Exotic Trees of Puerto Rico and the Caribbean Islands (Spanish version)

Science.gov (United States)

John K. Francis; Carol A. Lowe

2000-01-01

Se consideró por primera vez incluir las especies de árboles tropicales en Silvics of North America en el 1980, cuando el Servicio Forestal del Departamento de Agricultura de los Estados Unidos de Norteamérica decidió poner al día el Manual de Agricultura 271, Silvics of forest trees of the United States. Diez años más tarde el Manual de Agricultura 654 se publicó con...

Genetic connectivity and self-replenishment of inshore and offshore populations of the endemic anemonefish, Amphiprion latezonatus

KAUST Repository

Steinberg, Rosemary

2016-02-19

Globally, marine species are under increasing pressure from human activities, including ocean warming, acidification, pollution, and overfishing. Species most vulnerable to these pressures tend to be ecological specialists that have low abundance and small distribution ranges (endemics). Marine endemics often exist as meta-populations distributed among few isolated locations. Determining genetic connectivity among these locations is essential to understanding the recovery potential of endemics after local extinction events. This study examined connectivity in the endemic anemonefish, Amphiprion latezonatus, a habitat specialist with low abundance at most locations. Evolutionary and contemporary migration, genetic diversity, and self-replenishment among the four main locations (Sunshine Coast, North Solitary Island, Lord Howe Island, and Norfolk Island) that comprise the entire A. latezonatus geographic range were assessed using mtDNA and microsatellite markers. Though historical gene flow inferred from mtDNA appeared high, population genetic differentiation was evident and contemporary gene flow inferred from microsatellites was limited, alongside very high (≥89 %) self-replenishment at all locations. Together, these data suggest prolonged recovery times following severe population decline (or extirpation) and indicate a need to protect this species at all locations, particularly Norfolk Island and Sunshine Coast where marine protected areas are lacking.

TreePlus: interactive exploration of networks with enhanced tree layouts.

Science.gov (United States)

Lee, Bongshin; Parr, Cynthia S; Plaisant, Catherine; Bederson, Benjamin B; Veksler, Vladislav D; Gray, Wayne D; Kotfila, Christopher

2006-01-01

Despite extensive research, it is still difficult to produce effective interactive layouts for large graphs. Dense layout and occlusion make food webs, ontologies, and social networks difficult to understand and interact with. We propose a new interactive Visual Analytics component called TreePlus that is based on a tree-style layout. TreePlus reveals the missing graph structure with visualization and interaction while maintaining good readability. To support exploration of the local structure of the graph and gathering of information from the extensive reading of labels, we use a guiding metaphor of "Plant a seed and watch it grow." It allows users to start with a node and expand the graph as needed, which complements the classic overview techniques that can be effective at (but often limited to) revealing clusters. We describe our design goals, describe the interface, and report on a controlled user study with 28 participants comparing TreePlus with a traditional graph interface for six tasks. In general, the advantage of TreePlus over the traditional interface increased as the density of the displayed data increased. Participants also reported higher levels of confidence in their answers with TreePlus and most of them preferred TreePlus.

The slow demise of Easter Island: insights from a modelling investigation

Directory of Open Access Journals (Sweden)

Gunnar eBrandt

2015-02-01

Full Text Available The history of Easter Island and its supposed social-ecological collapse is often taken as a grim warning for the modern world. However, while the loss of a once lush palm forest is largely uncontested, causes and timing of the collapse remain controversial, because many paleoeological and archaeological data are afflicted with considerable uncertainties. According to a scenario named ecocide, the overharvesting of palm trees triggered a dramatic population decline, whereas a contrasting view termed genocide deems diseases and enslavement introduced by Europeans as the main reasons for the collapse. We propose here a third possibility, a slow demise, in which aspects of both ecocide and genocide concur to produce a long and slow decline of the society. We use a dynamic model to illustrate the consequences of the three alternatives with respect to the fate of the paleoecological system of the island.While none of the three model scenarios can be safely ruled out given the uncertainties of the available data, the slow demise appears to be the most plausible model scenario, in particular when considering the temporal pattern of deforestation as inferred from radiocarbon dates of charcoal remains.

Refining discordant gene trees.

Science.gov (United States)

Górecki, Pawel; Eulenstein, Oliver

2014-01-01

Evolutionary studies are complicated by discordance between gene trees and the species tree in which they evolved. Dealing with discordant trees often relies on comparison costs between gene and species trees, including the well-established Robinson-Foulds, gene duplication, and deep coalescence costs. While these costs have provided credible results for binary rooted gene trees, corresponding cost definitions for non-binary unrooted gene trees, which are frequently occurring in practice, are challenged by biological realism. We propose a natural extension of the well-established costs for comparing unrooted and non-binary gene trees with rooted binary species trees using a binary refinement model. For the duplication cost we describe an efficient algorithm that is based on a linear time reduction and also computes an optimal rooted binary refinement of the given gene tree. Finally, we show that similar reductions lead to solutions for computing the deep coalescence and the Robinson-Foulds costs. Our binary refinement of Robinson-Foulds, gene duplication, and deep coalescence costs for unrooted and non-binary gene trees together with the linear time reductions provided here for computing these costs significantly extends the range of trees that can be incorporated into approaches dealing with discordance.

The changing role of mammal life histories in Late Quaternary extinction vulnerability on continents and islands.

Science.gov (United States)

Lyons, S Kathleen; Miller, Joshua H; Fraser, Danielle; Smith, Felisa A; Boyer, Alison; Lindsey, Emily; Mychajliw, Alexis M

2016-06-01

Understanding extinction drivers in a human-dominated world is necessary to preserve biodiversity. We provide an overview of Quaternary extinctions and compare mammalian extinction events on continents and islands after human arrival in system-specific prehistoric and historic contexts. We highlight the role of body size and life-history traits in these extinctions. We find a significant size-bias except for extinctions on small islands in historic times. Using phylogenetic regression and classification trees, we find that while life-history traits are poor predictors of historic extinctions, those associated with difficulty in responding quickly to perturbations, such as small litter size, are good predictors of prehistoric extinctions. Our results are consistent with the idea that prehistoric and historic extinctions form a single continuing event with the same likely primary driver, humans, but the diversity of impacts and affected faunas is much greater in historic extinctions. © 2016 The Author(s).

NORTH-EAST ROMANIA AS A FUTURE SOURCE OF TREES FOR URBAN PAVED ENVIRONMENTS IN NORTH-WEST EUROPE

Directory of Open Access Journals (Sweden)

SJÖMAN HENRIK

2009-12-01

Full Text Available Trees are an important feature of the urban environment. The problem today lies not in finding a wide range of well-adapted tree species for park environments, but in finding species suitable for urban paved sites. In terms of north-west Europe, it is unlikely that the limited native dendroflora will provide a large variety of tree species with high tolerance to the environmental stresses characterising urban paved sites in the region. However, other regions with a comparable climate but with a rich dendroflora can potentially provide new tree species and genera well-suited to the growing conditions at urban sites in north-west Europe. This paper examines the potential of a geographical area extending over north-east Romania and the Republic of Moldavia to supply suitable tree species for urban paved sites in Central and Northern Europe (CNE. The study involved comparing the temperature, precipitation, evapotranspiration and water runoff in the woodland area of Iasi, Romania, with those the current inner-city climate of Copenhagen, Denmark and those predicted for Copenhagen 2100. The latter included urban heat island effects and predicted global climate change. The results revealed similar pattern in summer water deficit and temperature between natural woodlands in Iasi and inner-city environment of Copenhagen today. On the other hand, there is a weak match between Iasi and the future Copenhagen. In order to match the future scenario of Copenhagen with the present situation in Iasi, a greater understanding in a early phase that the solution not only depends on suitable tree species, but also on technical solutions being developed in order to have trees in paved environments in the future. On the basis of precipitation and temperature data, natural woodlands in north-east Romania have the potential to be a source of suitable trees for urban paved environments in the CNE region, even for a future climate if other aspects in the planning of trees

Simple street tree sampling

Science.gov (United States)

David J. Nowak; Jeffrey T. Walton; James Baldwin; Jerry. Bond

2015-01-01

Information on street trees is critical for management of this important resource. Sampling of street tree populations provides an efficient means to obtain street tree population information. Long-term repeat measures of street tree samples supply additional information on street tree changes and can be used to report damages from catastrophic events. Analyses of...

TreeFam: a curated database of phylogenetic trees of animal gene families

DEFF Research Database (Denmark)

Li, Heng; Coghlan, Avril; Ruan, Jue

2006-01-01

TreeFam is a database of phylogenetic trees of gene families found in animals. It aims to develop a curated resource that presents the accurate evolutionary history of all animal gene families, as well as reliable ortholog and paralog assignments. Curated families are being added progressively......, based on seed alignments and trees in a similar fashion to Pfam. Release 1.1 of TreeFam contains curated trees for 690 families and automatically generated trees for another 11 646 families. These represent over 128 000 genes from nine fully sequenced animal genomes and over 45 000 other animal proteins...

Tree-space statistics and approximations for large-scale analysis of anatomical trees

DEFF Research Database (Denmark)

Feragen, Aasa; Owen, Megan; Petersen, Jens

2013-01-01

parametrize the relevant parts of tree-space well. Using the developed approximate statistics, we illustrate how the structure and geometry of airway trees vary across a population and show that airway trees with Chronic Obstructive Pulmonary Disease come from a different distribution in tree-space than...

Rhode Island unemployment

OpenAIRE

Leonard Lardaro

2010-01-01

How can a state like Rhode Island have such a high unemployment rate? This question has been asked often over the past year, especially since at one point, Rhode Island found itself with the dubious distinction of having the highest unemployment rate in the United States. Following that extreme, Rhode Island seemed to settle into a niche where its rank was third nationally.

Relating phylogenetic trees to transmission trees of infectious disease outbreaks.

Science.gov (United States)

Ypma, Rolf J F; van Ballegooijen, W Marijn; Wallinga, Jacco

2013-11-01

Transmission events are the fundamental building blocks of the dynamics of any infectious disease. Much about the epidemiology of a disease can be learned when these individual transmission events are known or can be estimated. Such estimations are difficult and generally feasible only when detailed epidemiological data are available. The genealogy estimated from genetic sequences of sampled pathogens is another rich source of information on transmission history. Optimal inference of transmission events calls for the combination of genetic data and epidemiological data into one joint analysis. A key difficulty is that the transmission tree, which describes the transmission events between infected hosts, differs from the phylogenetic tree, which describes the ancestral relationships between pathogens sampled from these hosts. The trees differ both in timing of the internal nodes and in topology. These differences become more pronounced when a higher fraction of infected hosts is sampled. We show how the phylogenetic tree of sampled pathogens is related to the transmission tree of an outbreak of an infectious disease, by the within-host dynamics of pathogens. We provide a statistical framework to infer key epidemiological and mutational parameters by simultaneously estimating the phylogenetic tree and the transmission tree. We test the approach using simulations and illustrate its use on an outbreak of foot-and-mouth disease. The approach unifies existing methods in the emerging field of phylodynamics with transmission tree reconstruction methods that are used in infectious disease epidemiology.

Coastal management strategy for small island: ecotourism potency development in Karimata Island, West Kalimantan

Science.gov (United States)

Rudiastuti, A. W.; Munawaroh; Setyawan, I. E.; Pramono, G. H.

2018-04-01

Sustainable coastal management is playing an important role in coastal resources conservation, particularly on small islands. Karimata archipelago has unique characteristics and great potential to be developed as a tourism object, one of which is Karimata Island as the largest island and also reserve area. The concept of ecotourism focuses on the ecology conservation, economic benefits, and social life. Ecotourism aims to build sustainable tourism that provides economically viable and social benefits to the community. This study aims to develop coastal management strategy based on ecotourism at Karimata Island. Spatial approaching through coastal type was done. Qualitative descriptive analysis and SWOT are used to develop sustainable management strategies for the coast of Karimata Island, where the opportunities and challenges to the development of coastal ecotourism Karimata Island also included. If this potential is optimally utilized, it can be relied as an economic opportunity for local communities. Structurally shaped coast, marine depositional coast and coast build by organism are several of coastal types found at Karimata Island. Coastal ecosystems inhabited Karimata Island are mangroves, coral reefs, and macro-algae. Karimata Island have not been optimally utilized for tourist destinations. The biggest obstacle encountered is the accessibility from Kalimantan or other island at Karimata islands. Several problems related to the utilization of coastal resources were found such as mangrove and coral reef damage, also regulation that less supportive. The results of this study are expected to provide an overview of solutions for the development of coastal tourism potentials in Karimata Island.

Molecular Identification and Genetic Diversity of Acropora hyacinthus from Boo and Deer Island, Raja Ampat, West Papua

Science.gov (United States)

Wijayanti, DP; Indrayanti, E.; Nuryadi, H.; Dewi, RA; Sabdono, A.

2018-02-01

Indonesia lies at the centre of biodiversity for corals. However, the reefs suffered from extensive human exploitation. Marine Protected Areas is thought to be best solution to protect coral reefs ecosystem. Understanding genetic diversity is crucial for effective management of the MPAs, however genetic diversity is rarely been corporate in designing an MPA. Moreover, many MPAs are uneffectively manage due to poor designated and demarcated.Raja Ampat which is located in western tip of West Papua, was designated as a park to mitigatethreatsand protect the valuable marine resources.Scleractinian corals in the genus Acropora are among the most dominant distributed in Raja Ampat waters, including the species of Acroporahyacinthus. The research aimed to analyze genetic diversity and to describe the kinship relationship of Acroporahyacinthus between 2 populations: Boo Island and Deer Island, Raja Ampat. Genetic marker Cytochrome Oxidase I (CO I) of the mitochondrial genome DNA (mtDNA) was used to analyze genetic diversity. Reconstruction of phylogenetic tree and genetic diversity were made by usingsoftware MEGA 5.05 (Moleculer Evolutionary Genetics Analysis). The results of this research indicatecorals A. hyacinthus from Boo Island and Deer Island Raja Ampat are in the low category of genetic diversity and overall had a close genetic relationship of kinship. This is likely due to the small size of the population and few numbers of samples that may not represent the population.

Diversity and ecology of Varanus indicus in Pepaya Island at Teluk Cenderawasih National Park, West Irian Jaya

Directory of Open Access Journals (Sweden)

DENY ANJELIUS IYAI

2006-04-01

Full Text Available Monitor lizard (Varanidae has dispersed widely in Indonesia, even in Papua. Papua contents of six species. It’s distribution, abundance, both in land and island have been known yet, even carrying capacity of feeding relative limited. However, species extinction rates in nature were increasing both in it. This research was done in Papaya Island in Teluk Cenderawasih National Park, Nabire, Papua since 24th -25th October 2005. Descriptive method was done to answer this study. This research resulted that in Papaya island contents only one species that is Varanus indicus. The V. indicus chosen same habitat in southern part of Papaya island. This species dispersed on 0-4 m above sea level, humidity about 78.6%, and temperature about 23.90C. Vegetation was dominated by coconut (Cocos nucifera, bitangur (Calophyllum inophyllum and tikar (Pandanus sp., papaya (Carica papaya, and ketapang (Terminalia catappa. V. indicus chosen Megapodius reinwadt nest as nesting area. Population of V. indicus was estimated as much 36.3 ≈ 36 pieces by King Method. The nest of V. indicus placed in Cassuarina sp. tree where cutting down. The diet of V. indicus was found such as megapods, sea birds, lizard (sauria, butterflies and bats (Macrochyroptera. People were caused threatened both direct and indirect toward the V. indicus existence.

Decision-Tree Program

Science.gov (United States)

Buntine, Wray

1994-01-01

IND computer program introduces Bayesian and Markov/maximum-likelihood (MML) methods and more-sophisticated methods of searching in growing trees. Produces more-accurate class-probability estimates important in applications like diagnosis. Provides range of features and styles with convenience for casual user, fine-tuning for advanced user or for those interested in research. Consists of four basic kinds of routines: data-manipulation, tree-generation, tree-testing, and tree-display. Written in C language.

Tree-growth analyses to estimate tree species' drought tolerance.

Science.gov (United States)

Eilmann, Britta; Rigling, Andreas

2012-02-01

Climate change is challenging forestry management and practices. Among other things, tree species with the ability to cope with more extreme climate conditions have to be identified. However, while environmental factors may severely limit tree growth or even cause tree death, assessing a tree species' potential for surviving future aggravated environmental conditions is rather demanding. The aim of this study was to find a tree-ring-based method suitable for identifying very drought-tolerant species, particularly potential substitute species for Scots pine (Pinus sylvestris L.) in Valais. In this inner-Alpine valley, Scots pine used to be the dominating species for dry forests, but today it suffers from high drought-induced mortality. We investigate the growth response of two native tree species, Scots pine and European larch (Larix decidua Mill.), and two non-native species, black pine (Pinus nigra Arnold) and Douglas fir (Pseudotsuga menziesii Mirb. var. menziesii), to drought. This involved analysing how the radial increment of these species responded to increasing water shortage (abandonment of irrigation) and to increasingly frequent drought years. Black pine and Douglas fir are able to cope with drought better than Scots pine and larch, as they show relatively high radial growth even after irrigation has been stopped and a plastic growth response to drought years. European larch does not seem to be able to cope with these dry conditions as it lacks the ability to recover from drought years. The analysis of trees' short-term response to extreme climate events seems to be the most promising and suitable method for detecting how tolerant a tree species is towards drought. However, combining all the methods used in this study provides a complete picture of how water shortage could limit species.

Are trees long-lived?

Science.gov (United States)

Kevin T. Smith

2009-01-01

Trees and tree care can capture the best of people's motivations and intentions. Trees are living memorials that help communities heal at sites of national tragedy, such as Oklahoma City and the World Trade Center. We mark the places of important historical events by the trees that grew nearby even if the original tree, such as the Charter Oak in Connecticut or...

Self-sustained magnetic islands

Energy Technology Data Exchange (ETDEWEB)

Chatenet, J H; Luciani, J F [Ecole Polytechnique, 91 - Palaiseau (France); Garbet, X [Association Euratom-CEA, Centre d` Etudes de Cadarache, 13 - Saint-Paul-lez-Durance (France). Dept. de Recherches sur la Fusion Controlee

1996-06-01

Numerical simulations of a single magnetic island evolution are presented in the regime where the island width is smaller than an ion Larmor radius. It is shown that the island rotation is controlled by particle diffusion due to collisions or a background of microturbulence. As expected from the theory of a stationary island, there exist cases where linearly stable magnetic perturbation are nonlinearly self-sustained. This situation corresponds to large poloidal beta and temperature gradient. The drive is due to diamagnetic frequency effects. However, this situation is not generic, and islands can also decay. It is found that a magnetic island is self-sustained for a negative off-diagonal diffusion coefficient. This case occurs in a tokamak if the inward particle pinch is due to the temperature gradient. (author). 30 refs.

Self-sustained magnetic islands

International Nuclear Information System (INIS)

Chatenet, J.H.; Luciani, J.F.; Garbet, X.

1996-06-01

Numerical simulations of a single magnetic island evolution are presented in the regime where the island width is smaller than an ion Larmor radius. It is shown that the island rotation is controlled by particle diffusion due to collisions or a background of microturbulence. As expected from the theory of a stationary island, there exist cases where linearly stable magnetic perturbation are nonlinearly self-sustained. This situation corresponds to large poloidal beta and temperature gradient. The drive is due to diamagnetic frequency effects. However, this situation is not generic, and islands can also decay. It is found that a magnetic island is self-sustained for a negative off-diagonal diffusion coefficient. This case occurs in a tokamak if the inward particle pinch is due to the temperature gradient. (author)

Defining critical habitats of threatened and endemic reef fishes with a multivariate approach.

Science.gov (United States)

Purcell, Steven W; Clarke, K Robert; Rushworth, Kelvin; Dalton, Steven J

2014-12-01

Understanding critical habitats of threatened and endemic animals is essential for mitigating extinction risks, developing recovery plans, and siting reserves, but assessment methods are generally lacking. We evaluated critical habitats of 8 threatened or endemic fish species on coral and rocky reefs of subtropical eastern Australia, by measuring physical and substratum-type variables of habitats at fish sightings. We used nonmetric and metric multidimensional scaling (nMDS, mMDS), Analysis of similarities (ANOSIM), similarity percentages analysis (SIMPER), permutational analysis of multivariate dispersions (PERMDISP), and other multivariate tools to distinguish critical habitats. Niche breadth was widest for 2 endemic wrasses, and reef inclination was important for several species, often found in relatively deep microhabitats. Critical habitats of mainland reef species included small caves or habitat-forming hosts such as gorgonian corals and black coral trees. Hard corals appeared important for reef fishes at Lord Howe Island, and red algae for mainland reef fishes. A wide range of habitat variables are required to assess critical habitats owing to varied affinities of species to different habitat features. We advocate assessments of critical habitats matched to the spatial scale used by the animals and a combination of multivariate methods. Our multivariate approach furnishes a general template for assessing the critical habitats of species, understanding how these vary among species, and determining differences in the degree of habitat specificity. © 2014 Society for Conservation Biology.

Temporal Dynamics in the Concentration, Flux, and Optical Properties of Tree-Derived Dissolved Organic Matter in an Epiphyte-Laden Oak-Cedar Forest

Science.gov (United States)

Van Stan, John T.; Wagner, Sasha; Guillemette, François; Whitetree, Ansley; Lewis, Julius; Silva, Leticia; Stubbins, Aron

2017-11-01

Studies on the fate and transport of dissolved organic matter (DOM) along the rainfall-to-discharge flow pathway typically begin in streams or soils, neglecting the initial enrichment of rainfall with DOM during contact with plant canopies. However, rain water can gather significant amounts of tree-derived DOM (tree-DOM) when it drains from the canopy, as throughfall, and down the stem, as stemflow. We examined the temporal variability of event-scale tree-DOM concentrations, yield, and optical (light absorbance and fluorescence) characteristics from an epiphyte-laden Quercus virginiana-Juniperus virginiana forest on Skidaway Island, Savannah, Georgia (USA). All tree-DOM fluxes were highly enriched in dissolved organic carbon (DOC) compared to rainfall, and epiphytes further increased concentrations. Stemflow DOC concentrations were greater than throughfall across study species, yet larger throughfall water yields produced greater DOC yields versus stemflow. Tree-DOM optical characteristics indicate it is aromatic-rich with fluorescent DOM dominated by humic-like fluorescence, containing 10-20% protein-like (tryptophan-like) fluorescence. Storm size was the only storm condition that strongly correlated with tree-DOM concentration and flux; however, throughfall and stemflow optical characteristics varied little across a wide range of storm conditions (from low magnitude events to intense tropical storms). Annual tree-DOM yields from the study forest (0.8-46 g C m-2 yr-1) were similar to other yields from discrete down-gradient fluxes (litter leachates, soil leachates, and stream discharge) along the rainfall-to-discharge flow path.

There's Life in Hazard Trees

Science.gov (United States)

Mary Torsello; Toni McLellan

The goals of hazard tree management programs are to maximize public safety and maintain a healthy sustainable tree resource. Although hazard tree management frequently targets removal of trees or parts of trees that attract wildlife, it can take into account a diversity of tree values. With just a little extra planning, hazard tree management can be highly beneficial...

Reliving Island Life: Staging Stories of the Blasket Islands

Directory of Open Access Journals (Sweden)

Daithí Kearney

2017-10-01

Full Text Available The Blasket Islands are located off the south-west coast of Ireland. No longer inhabited, the Great Blasket Island and its distinctive culture have been documented by a variety of writers and are celebrated today in an interpretative centre on the mainland and in performances by Siamsa Tíre, The National Folk Theatre of Ireland. “Siamsa” developed from local initiatives in North Kerry during the early 1960s and is located today in Tralee, Co. Kerry. It aims to present Irish folklore and folk culture through the medium of theatre involving music, song, dance and mime but invariably no dialogue. In this paper, I focus on the production Oiléan, based loosely on the stories of the Blasket Islanders, which was initially devised as part of the fiftieth anniversary commemoration of the departure of the last inhabitants of the islands in 2003.

Phylogeography of Quercus variabilis Based on Chloroplast DNA Sequence in East Asia : Multiple Glacial Refugia and Mainland-Migrated Island Populations

OpenAIRE

Chen, Dongmei; Zhang, Xianxian; Kang, Hongzhang; Sun, Xiao; Yin, Shan; Du, Hongmei; Yamanaka, Norikazu; Gapare, Washington; Wu, Harry X.; Liu, Chunjiang

2012-01-01

The biogeographical relationships between far-separated populations, in particular, those in the mainland and islands, remain unclear for widespread species in eastern Asia where the current distribution of plants was greatly influenced by the Quaternary climate. Deciduous Oriental oak (Quercus variabilis) is one of the most widely distributed species in eastern Asia. In this study, leaf material of 528 Q. variabilis trees from 50 populations across the whole distribution (Mainland China, Kor...

Fast Tree: Computing Large Minimum-Evolution Trees with Profiles instead of a Distance Matrix

Energy Technology Data Exchange (ETDEWEB)

N. Price, Morgan; S. Dehal, Paramvir; P. Arkin, Adam

2009-07-31

Gene families are growing rapidly, but standard methods for inferring phylogenies do not scale to alignments with over 10,000 sequences. We present FastTree, a method for constructing large phylogenies and for estimating their reliability. Instead of storing a distance matrix, FastTree stores sequence profiles of internal nodes in the tree. FastTree uses these profiles to implement neighbor-joining and uses heuristics to quickly identify candidate joins. FastTree then uses nearest-neighbor interchanges to reduce the length of the tree. For an alignment with N sequences, L sites, and a different characters, a distance matrix requires O(N^2) space and O(N^2 L) time, but FastTree requires just O( NLa + N sqrt(N) ) memory and O( N sqrt(N) log(N) L a ) time. To estimate the tree's reliability, FastTree uses local bootstrapping, which gives another 100-fold speedup over a distance matrix. For example, FastTree computed a tree and support values for 158,022 distinct 16S ribosomal RNAs in 17 hours and 2.4 gigabytes of memory. Just computing pairwise Jukes-Cantor distances and storing them, without inferring a tree or bootstrapping, would require 17 hours and 50 gigabytes of memory. In simulations, FastTree was slightly more accurate than neighbor joining, BIONJ, or FastME; on genuine alignments, FastTree's topologies had higher likelihoods. FastTree is available at http://microbesonline.org/fasttree.

46 CFR 7.85 - St. Simons Island, GA to Little Talbot Island, FL.

Science.gov (United States)

2010-10-01

... 46 Shipping 1 2010-10-01 2010-10-01 false St. Simons Island, GA to Little Talbot Island, FL. 7.85... BOUNDARY LINES Atlantic Coast § 7.85 St. Simons Island, GA to Little Talbot Island, FL. (a) A line drawn from latitude 31°04.1′ N. longitude 81°16.7′ W. (St. Simons Lighted Whistle Buoy “ST S”) to latitude 30...

TreeRipper web application: towards a fully automated optical tree recognition software

Directory of Open Access Journals (Sweden)

Hughes Joseph

2011-05-01

Full Text Available Abstract Background Relationships between species, genes and genomes have been printed as trees for over a century. Whilst this may have been the best format for exchanging and sharing phylogenetic hypotheses during the 20th century, the worldwide web now provides faster and automated ways of transferring and sharing phylogenetic knowledge. However, novel software is needed to defrost these published phylogenies for the 21st century. Results TreeRipper is a simple website for the fully-automated recognition of multifurcating phylogenetic trees (http://linnaeus.zoology.gla.ac.uk/~jhughes/treeripper/. The program accepts a range of input image formats (PNG, JPG/JPEG or GIF. The underlying command line c++ program follows a number of cleaning steps to detect lines, remove node labels, patch-up broken lines and corners and detect line edges. The edge contour is then determined to detect the branch length, tip label positions and the topology of the tree. Optical Character Recognition (OCR is used to convert the tip labels into text with the freely available tesseract-ocr software. 32% of images meeting the prerequisites for TreeRipper were successfully recognised, the largest tree had 115 leaves. Conclusions Despite the diversity of ways phylogenies have been illustrated making the design of a fully automated tree recognition software difficult, TreeRipper is a step towards automating the digitization of past phylogenies. We also provide a dataset of 100 tree images and associated tree files for training and/or benchmarking future software. TreeRipper is an open source project licensed under the GNU General Public Licence v3.

MixtureTree annotator: a program for automatic colorization and visual annotation of MixtureTree.

Directory of Open Access Journals (Sweden)

Shu-Chuan Chen

Full Text Available The MixtureTree Annotator, written in JAVA, allows the user to automatically color any phylogenetic tree in Newick format generated from any phylogeny reconstruction program and output the Nexus file. By providing the ability to automatically color the tree by sequence name, the MixtureTree Annotator provides a unique advantage over any other programs which perform a similar function. In addition, the MixtureTree Annotator is the only package that can efficiently annotate the output produced by MixtureTree with mutation information and coalescent time information. In order to visualize the resulting output file, a modified version of FigTree is used. Certain popular methods, which lack good built-in visualization tools, for example, MEGA, Mesquite, PHY-FI, TreeView, treeGraph and Geneious, may give results with human errors due to either manually adding colors to each node or with other limitations, for example only using color based on a number, such as branch length, or by taxonomy. In addition to allowing the user to automatically color any given Newick tree by sequence name, the MixtureTree Annotator is the only method that allows the user to automatically annotate the resulting tree created by the MixtureTree program. The MixtureTree Annotator is fast and easy-to-use, while still allowing the user full control over the coloring and annotating process.

On Determining if Tree-based Networks Contain Fixed Trees.

Science.gov (United States)

Anaya, Maria; Anipchenko-Ulaj, Olga; Ashfaq, Aisha; Chiu, Joyce; Kaiser, Mahedi; Ohsawa, Max Shoji; Owen, Megan; Pavlechko, Ella; St John, Katherine; Suleria, Shivam; Thompson, Keith; Yap, Corrine

2016-05-01

We address an open question of Francis and Steel about phylogenetic networks and trees. They give a polynomial time algorithm to decide if a phylogenetic network, N, is tree-based and pose the problem: given a fixed tree T and network N, is N based on T? We show that it is [Formula: see text]-hard to decide, by reduction from 3-Dimensional Matching (3DM) and further that the problem is fixed-parameter tractable.

Adaptive radiation of island plants: Evidence from Aeonium (Crassulaceae) of the Canary Islands

DEFF Research Database (Denmark)

Jorgensen, T.H.; Olesen, J.M.

2001-01-01

evidence that such traits have been acquired through convergent evolution on islands comes from molecular phylogenies; however, direct evidence of their selective value rarely is obtained. The importance of hybridization in the evolution of island plants is also considered as part of a more general......The presence of diverse and species-rich plant lineages on oceanic islands is most often associated with adaptive radiation. Here we discuss the possible adaptive significance of some of the most prominent traits in island plants, including woodiness, monocarpy and sexual dimorphisms. Indirect...... discussion of the mechanisms governing radiations on islands. Most examples are from the Hawaiian and Canarian floras, and in particular from studies on the morphological, ecological and molecular diversification of the genus Aeonium, the largest plant radiation of the Canarian Islands....

Whole-tree distribution and temporal variation of non-structural carbohydrates in broadleaf evergreen trees.

Science.gov (United States)

Smith, Merryn G; Miller, Rebecca E; Arndt, Stefan K; Kasel, Sabine; Bennett, Lauren T

2018-04-01

Non-structural carbohydrates (NSCs) form a fundamental yet poorly quantified carbon pool in trees. Studies of NSC seasonality in forest trees have seldom measured whole-tree NSC stocks and allocation among organs, and are not representative of all tree functional types. Non-structural carbohydrate research has primarily focussed on broadleaf deciduous and coniferous evergreen trees with distinct growing seasons, while broadleaf evergreen trees remain under-studied despite their different growth phenology. We measured whole-tree NSC allocation and temporal variation in Eucalyptus obliqua L'Hér., a broadleaf evergreen tree species typically occurring in mixed-age temperate forests, which has year-round growth and the capacity to resprout after fire. Our overarching objective was to improve the empirical basis for understanding the functional importance of NSC allocation and stock changes at the tree- and organ-level in this tree functional type. Starch was the principal storage carbohydrate and was primarily stored in the stem and roots of young (14-year-old) trees rather than the lignotuber, which did not appear to be a specialized starch storage organ. Whole-tree NSC stocks were depleted during spring and summer due to significant decreases in starch mass in the roots and stem, seemingly to support root and crown growth but potentially exacerbated by water stress in summer. Seasonality of stem NSCs differed between young and mature trees, and was not synchronized with stem basal area increments in mature trees. Our results suggest that the relative magnitude of seasonal NSC stock changes could vary with tree growth stage, and that the main drivers of NSC fluctuations in broadleaf evergreen trees in temperate biomes could be periodic disturbances such as summer drought and fire, rather than growth phenology. These results have implications for understanding post-fire tree recovery via resprouting, and for incorporating NSC pools into carbon models of mixed

The effect of contaminated groundwater on tree growth: A tree-ring analysis

International Nuclear Information System (INIS)

LeBlanc, D.C.; Loehle, C.

1990-10-01

A study was conducted on the effect of contaminated groundwater seepage on tree growth downslope from F- and H-Area seepage basins of the Savannah River Site. Trees in wetlands along Four Mile Creek began to show localized stress and mortality in the late 1970s. Extreme winter temperatures and high rainfall were ruled out as potential causal factors of tree stress. Drought was shown to affect trees in both contaminated and uncontaminated zones, but trees in uncontaminated areas exhibit better recovery after drought than trees in contaminated areas. Pollution-mediated alteration of soil acidity and aluminum, sodium, and heavy metal concentrations likely acted to predispose trees to decline, with severe drought acting as the trigger for decline initiation and tree death. Thus, a moderate pollution loading, not sufficient to cause visible damage of itself, may create conditions in which sudden, severe decline could result from natural stresses. This mechanism of forest decline is common, and should be considered in evaluations of the impact of pollution on wetland forest systems. 28 refs., 4 figs., 6 tabs

SILVA tree viewer: interactive web browsing of the SILVA phylogenetic guide trees.

Science.gov (United States)

Beccati, Alan; Gerken, Jan; Quast, Christian; Yilmaz, Pelin; Glöckner, Frank Oliver

2017-09-30

Phylogenetic trees are an important tool to study the evolutionary relationships among organisms. The huge amount of available taxa poses difficulties in their interactive visualization. This hampers the interaction with the users to provide feedback for the further improvement of the taxonomic framework. The SILVA Tree Viewer is a web application designed for visualizing large phylogenetic trees without requiring the download of any software tool or data files. The SILVA Tree Viewer is based on Web Geographic Information Systems (Web-GIS) technology with a PostgreSQL backend. It enables zoom and pan functionalities similar to Google Maps. The SILVA Tree Viewer enables access to two phylogenetic (guide) trees provided by the SILVA database: the SSU Ref NR99 inferred from high-quality, full-length small subunit sequences, clustered at 99% sequence identity and the LSU Ref inferred from high-quality, full-length large subunit sequences. The Tree Viewer provides tree navigation, search and browse tools as well as an interactive feedback system to collect any kinds of requests ranging from taxonomy to data curation and improving the tool itself.

Heron Island, Australia

Science.gov (United States)

2002-01-01

Heron Island is located at the sourthern end of Australia's 2,050 km-long Great Barrier Reef. Surrounded by coral reef and home to over 1000 species of fish, scuba divers and scientists alike are drawn to the island's resort and research station. The true-color image above was taken by Space Imaging's Ikonos satellite with a resolution of 4 meters per pixel-high enough to see individual boats tied up at the small marina. The narrow channel leading from the marina to the ocean was blasted and dredged decades ago, before the island became a national park. Since then the Australian government has implemented conservation measures, such as limiting the number of tourists and removing or recycling, instead of incinerating, all trash. One of the applications of remote sensing data from Ikonos is environmental monitoring, including studies of coral reef health. For more information about the island, read Heron Island. Image by Robert Simmon, based on data copyright Space Imaging

D2-tree

DEFF Research Database (Denmark)

Brodal, Gerth Stølting; Sioutas, Spyros; Pantazos, Kostas

2015-01-01

We present a new overlay, called the Deterministic Decentralized tree (D2-tree). The D2-tree compares favorably to other overlays for the following reasons: (a) it provides matching and better complexities, which are deterministic for the supported operations; (b) the management of nodes (peers...

Tree felling 2014

CERN Multimedia

2014-01-01

With a view to creating new landscapes and making its population of trees safer and healthier, this winter CERN will complete the tree-felling campaign started in 2010.   Tree felling will take place between 15 and 22 November on the Swiss part of the Meyrin site. This work is being carried out above all for safety reasons. The trees to be cut down are at risk of falling as they are too old and too tall to withstand the wind. In addition, the roots of poplar trees are very powerful and spread widely, potentially damaging underground networks, pavements and roadways. Compensatory tree planting campaigns will take place in the future, subject to the availability of funding, with the aim of creating coherent landscapes while also respecting the functional constraints of the site. These matters are being considered in close collaboration with the Geneva nature and countryside directorate (Direction générale de la nature et du paysage, DGNP). GS-SE Group

Phylogenetic trees

OpenAIRE

Baños, Hector; Bushek, Nathaniel; Davidson, Ruth; Gross, Elizabeth; Harris, Pamela E.; Krone, Robert; Long, Colby; Stewart, Allen; Walker, Robert

2016-01-01

We introduce the package PhylogeneticTrees for Macaulay2 which allows users to compute phylogenetic invariants for group-based tree models. We provide some background information on phylogenetic algebraic geometry and show how the package PhylogeneticTrees can be used to calculate a generating set for a phylogenetic ideal as well as a lower bound for its dimension. Finally, we show how methods within the package can be used to compute a generating set for the join of any two ideals.

Formation and adjustment of typhoon-impacted reef islands interpreted from remote imagery: Nadikdik Atoll, Marshall Islands

Science.gov (United States)

Ford, Murray R.; Kench, Paul S.

2014-06-01

In 1905, a devastating typhoon hit Nadikdik Atoll (5°54‧ N and 172°09‧ E) in the southern Marshall Islands. Evidence suggests that large sections of reef islands on Nadikdik were overwashed and destroyed. Comparison of aerial photographs taken in 1945 and modern satellite imagery provides a unique record of the geomorphic adjustment of islands after the typhoon. Between 1945 and 2010 the vegetated area of islands on Nadikdik grew from 0.74 to 0.90 km2. Observed changes to Nadikdik reef islands manifested through a range of styles and were largely accretionary. Of note, the formation of a new island was tracked from an embryonic deposit to a fully vegetated and stable island over a 61 year period. Similarly, a number of previously discrete islands have agglomerated and formed a single larger island. These changes were rapid and indicate that reef island formation can occur quickly. Evidence suggests that despite the typhoon occurring over a century ago the geomorphic adjustment of islands is still on-going.

Identifying the rooted species tree from the distribution of unrooted gene trees under the coalescent.

Science.gov (United States)

Allman, Elizabeth S; Degnan, James H; Rhodes, John A

2011-06-01

Gene trees are evolutionary trees representing the ancestry of genes sampled from multiple populations. Species trees represent populations of individuals-each with many genes-splitting into new populations or species. The coalescent process, which models ancestry of gene copies within populations, is often used to model the probability distribution of gene trees given a fixed species tree. This multispecies coalescent model provides a framework for phylogeneticists to infer species trees from gene trees using maximum likelihood or Bayesian approaches. Because the coalescent models a branching process over time, all trees are typically assumed to be rooted in this setting. Often, however, gene trees inferred by traditional phylogenetic methods are unrooted. We investigate probabilities of unrooted gene trees under the multispecies coalescent model. We show that when there are four species with one gene sampled per species, the distribution of unrooted gene tree topologies identifies the unrooted species tree topology and some, but not all, information in the species tree edges (branch lengths). The location of the root on the species tree is not identifiable in this situation. However, for 5 or more species with one gene sampled per species, we show that the distribution of unrooted gene tree topologies identifies the rooted species tree topology and all its internal branch lengths. The length of any pendant branch leading to a leaf of the species tree is also identifiable for any species from which more than one gene is sampled.

Spiders on a Hot Volcanic Roof: Colonisation Pathways and Phylogeography of the Canary Islands Endemic Trap-Door Spider Titanidiops canariensis (Araneae, Idiopidae)

Science.gov (United States)

Opatova, Vera; Arnedo, Miquel A.

2014-01-01

Studies conducted on volcanic islands have greatly contributed to our current understanding of how organisms diversify. The Canary Islands archipelago, located northwest of the coast of northern Africa, harbours a large number of endemic taxa. Because of their low vagility, mygalomorph spiders are usually absent from oceanic islands. The spider Titanidiops canariensis, which inhabits the easternmost islands of the archipelago, constitutes an exception to this rule. Here, we use a multi-locus approach that combines three mitochondrial and four nuclear genes to investigate the origins and phylogeography of this remarkable trap-door spider. We provide a timeframe for the colonisation of the Canary Islands using two alternative approaches: concatenation and species tree inference in a Bayesian relaxed clock framework. Additionally, we investigate the existence of cryptic species on the islands by means of a Bayesian multi-locus species delimitation method. Our results indicate that T. canariensis colonised the Canary Islands once, most likely during the Miocene, although discrepancies between the timeframes from different approaches make the exact timing uncertain. A complex evolutionary history for the species in the archipelago is revealed, which involves two independent colonisations of Fuerteventura from the ancestral range of T. canariensis in northern Lanzarote and a possible back colonisation of southern Lanzarote. The data further corroborate a previously proposed volcanic refugium, highlighting the impact of the dynamic volcanic history of the island on the phylogeographic patterns of the endemic taxa. T. canariensis includes at least two different species, one inhabiting the Jandia peninsula and central Fuerteventura and one spanning from central Fuerteventura to Lanzarote. Our data suggest that the extant northern African Titanidiops lineages may have expanded to the region after the islands were colonised and, hence, are not the source of colonisation. In

Spiders on a Hot Volcanic Roof: Colonisation Pathways and Phylogeography of the Canary Islands Endemic Trap-Door Spider Titanidiops canariensis (Araneae, Idiopidae.

Directory of Open Access Journals (Sweden)

Vera Opatova

Full Text Available Studies conducted on volcanic islands have greatly contributed to our current understanding of how organisms diversify. The Canary Islands archipelago, located northwest of the coast of northern Africa, harbours a large number of endemic taxa. Because of their low vagility, mygalomorph spiders are usually absent from oceanic islands. The spider Titanidiops canariensis, which inhabits the easternmost islands of the archipelago, constitutes an exception to this rule. Here, we use a multi-locus approach that combines three mitochondrial and four nuclear genes to investigate the origins and phylogeography of this remarkable trap-door spider. We provide a timeframe for the colonisation of the Canary Islands using two alternative approaches: concatenation and species tree inference in a Bayesian relaxed clock framework. Additionally, we investigate the existence of cryptic species on the islands by means of a Bayesian multi-locus species delimitation method. Our results indicate that T. canariensis colonised the Canary Islands once, most likely during the Miocene, although discrepancies between the timeframes from different approaches make the exact timing uncertain. A complex evolutionary history for the species in the archipelago is revealed, which involves two independent colonisations of Fuerteventura from the ancestral range of T. canariensis in northern Lanzarote and a possible back colonisation of southern Lanzarote. The data further corroborate a previously proposed volcanic refugium, highlighting the impact of the dynamic volcanic history of the island on the phylogeographic patterns of the endemic taxa. T. canariensis includes at least two different species, one inhabiting the Jandia peninsula and central Fuerteventura and one spanning from central Fuerteventura to Lanzarote. Our data suggest that the extant northern African Titanidiops lineages may have expanded to the region after the islands were colonised and, hence, are not the source

Spiders on a Hot Volcanic Roof: Colonisation Pathways and Phylogeography of the Canary Islands Endemic Trap-Door Spider Titanidiops canariensis (Araneae, Idiopidae).

Science.gov (United States)

Opatova, Vera; Arnedo, Miquel A

2014-01-01

Studies conducted on volcanic islands have greatly contributed to our current understanding of how organisms diversify. The Canary Islands archipelago, located northwest of the coast of northern Africa, harbours a large number of endemic taxa. Because of their low vagility, mygalomorph spiders are usually absent from oceanic islands. The spider Titanidiops canariensis, which inhabits the easternmost islands of the archipelago, constitutes an exception to this rule. Here, we use a multi-locus approach that combines three mitochondrial and four nuclear genes to investigate the origins and phylogeography of this remarkable trap-door spider. We provide a timeframe for the colonisation of the Canary Islands using two alternative approaches: concatenation and species tree inference in a Bayesian relaxed clock framework. Additionally, we investigate the existence of cryptic species on the islands by means of a Bayesian multi-locus species delimitation method. Our results indicate that T. canariensis colonised the Canary Islands once, most likely during the Miocene, although discrepancies between the timeframes from different approaches make the exact timing uncertain. A complex evolutionary history for the species in the archipelago is revealed, which involves two independent colonisations of Fuerteventura from the ancestral range of T. canariensis in northern Lanzarote and a possible back colonisation of southern Lanzarote. The data further corroborate a previously proposed volcanic refugium, highlighting the impact of the dynamic volcanic history of the island on the phylogeographic patterns of the endemic taxa. T. canariensis includes at least two different species, one inhabiting the Jandia peninsula and central Fuerteventura and one spanning from central Fuerteventura to Lanzarote. Our data suggest that the extant northern African Titanidiops lineages may have expanded to the region after the islands were colonised and, hence, are not the source of colonisation. In

Accuracy of LiDAR-based tree height estimation and crown recognition in a subtropical evergreen broad-leaved forest in Okinawa, Japan

Directory of Open Access Journals (Sweden)

Azita Ahmad Zawawi

2015-04-01

Full Text Available Aim of study: To present an approach for estimating tree heights, stand density and crown patches using LiDAR data in a subtropical broad-leaved forest. Area of study: The study was conducted within the Yambaru subtropical evergreen broad-leaved forest, Okinawa main island, Japan. Materials and methods: A digital canopy height model (CHM was extracted from the LiDAR data for tree height estimation and a watershed segmentation method was applied for the individual crown delineation. Dominant tree canopy layers were estimated using multi-scale filtering and local maxima detection. The LiDAR estimation results were then compared to the ground inventory data and a high resolution orthophoto image for accuracy assessment. Main results: A Wilcoxon matched pair test suggests that LiDAR data is highly capable of estimating tree height in a subtropical forest (z = 4.0, p = 0.345, but has limitation to detect small understory trees and a single tree delineation. The results show that there is a statistically significant different type of crown detection from LiDAR data over forest inventory (z = 0, p = 0.043. We also found that LiDAR computation results underestimated the stand density and overestimated the crown size. Research highlights: Most studies involving crown detection and tree height estimation have focused on the analysis of plantations, boreal forests and temperate forests, and less was conducted on tropical and/or subtropical forests. Our study tested the capability of LiDAR as an effective application for analyzing a highly dense forest

Seed germination responses in a temperate rain forest of Chiloé, Chile: effects of a gap and the tree canopy

OpenAIRE

Figueroa, Javier A; Hernández, Juan F

2001-01-01

This study determined germination responses of 19 species, including trees, shrubs, vines, and herbs, under natural gap and non-gap conditions, in a secondary forest in Chiloé Island, southern Chile, in order to assess if there is any association between the habitat where the seedlings of these plant species occur and their germination requirements. Statistical differences in percentage seed germination were detected in six species in a gap habitat compared to the understory. Five forest edge...

Genetic connectivity of the moth pollinated tree Glionnetia sericea in a highly fragmented habitat.

Science.gov (United States)

Finger, Aline; Kaiser-Bunbury, Christopher N; Kettle, Chris J; Valentin, Terence; Ghazoul, Jaboury

2014-01-01

Long-distance gene flow is thought to be one prerequisite for the persistence of plant species in fragmented environments. Human influences have led to severe fragmentation of native habitats in the Seychelles islands, with many species surviving only in small and isolated populations. The endangered Seychelles endemic tree Glionnetia sericea is restricted to altitudes between 450 m and 900 m where the native forest vegetation has been largely lost and replaced with exotic invasives over the last 200 years. This study explores the genetic and ecological consequences of population fragmentation in this species by analysing patterns of genetic diversity in a sample of adults, juveniles and seeds, and by using controlled pollination experiments. Our results show no decrease in genetic diversity and no increase in genetic structuring from adult to juvenile cohorts. Despite significant inbreeding in some populations, there is no evidence of higher inbreeding in juvenile cohorts relative to adults. A Bayesian structure analysis and a tentative paternity analysis indicate extensive historical and contemporary gene flow among remnant populations. Pollination experiments and a paternity analysis show that Glionnetia sericea is self-compatible. Nevertheless, outcrossing is present with 7% of mating events resulting from pollen transfer between populations. Artificial pollination provided no evidence for pollen limitation in isolated populations. The highly mobile and specialized hawkmoth pollinators (Agrius convolvuli and Cenophodes tamsi; Sphingidae) appear to promote extensive gene flow, thus mitigating the potential negative ecological and genetic effects of habitat fragmentation in this species. We conclude that contemporary gene flow is sufficient to maintain genetic connectivity in this rare and restricted Seychelles endemic, in contrast to other island endemic tree species with limited contemporary gene flow.

Genetic connectivity of the moth pollinated tree Glionnetia sericea in a highly fragmented habitat.

Directory of Open Access Journals (Sweden)

Aline Finger

Full Text Available Long-distance gene flow is thought to be one prerequisite for the persistence of plant species in fragmented environments. Human influences have led to severe fragmentation of native habitats in the Seychelles islands, with many species surviving only in small and isolated populations. The endangered Seychelles endemic tree Glionnetia sericea is restricted to altitudes between 450 m and 900 m where the native forest vegetation has been largely lost and replaced with exotic invasives over the last 200 years. This study explores the genetic and ecological consequences of population fragmentation in this species by analysing patterns of genetic diversity in a sample of adults, juveniles and seeds, and by using controlled pollination experiments. Our results show no decrease in genetic diversity and no increase in genetic structuring from adult to juvenile cohorts. Despite significant inbreeding in some populations, there is no evidence of higher inbreeding in juvenile cohorts relative to adults. A Bayesian structure analysis and a tentative paternity analysis indicate extensive historical and contemporary gene flow among remnant populations. Pollination experiments and a paternity analysis show that Glionnetia sericea is self-compatible. Nevertheless, outcrossing is present with 7% of mating events resulting from pollen transfer between populations. Artificial pollination provided no evidence for pollen limitation in isolated populations. The highly mobile and specialized hawkmoth pollinators (Agrius convolvuli and Cenophodes tamsi; Sphingidae appear to promote extensive gene flow, thus mitigating the potential negative ecological and genetic effects of habitat fragmentation in this species. We conclude that contemporary gene flow is sufficient to maintain genetic connectivity in this rare and restricted Seychelles endemic, in contrast to other island endemic tree species with limited contemporary gene flow.

Covering tree with stars

DEFF Research Database (Denmark)

Baumbach, Jan; Guo, Jiong; Ibragimov, Rashid

2015-01-01

We study the tree edit distance problem with edge deletions and edge insertions as edit operations. We reformulate a special case of this problem as Covering Tree with Stars (CTS): given a tree T and a set of stars, can we connect the stars in by adding edges between them such that the resulting...... tree is isomorphic to T? We prove that in the general setting, CST is NP-complete, which implies that the tree edit distance considered here is also NP-hard, even when both input trees having diameters bounded by 10. We also show that, when the number of distinct stars is bounded by a constant k, CTS...

On the detection of thermohygrometric differences of Juniperus turbinata habitat between north and south faces in the island of El Hierro (Canary Islands)

Science.gov (United States)

Salva-Catarineu, Montserrat; Salvador-Franch, Ferran; Lopez-Bustins, Joan A.; Padrón-Padrón, Pedro A.; Cortés-Lucas, Amparo

2016-04-01

The current extent of Juniperus turbinata in the island of El Hierro is very small due to heavy exploitation for centuries. The recovery of its natural habitat has such a high environmental and scenic interest since this is a protected species in Europe. The study of the environmental factors that help or limit its recovery is indispensable. Our research project (JUNITUR) studied the populations of juniper woodlands in El Hierro from different environments. These environments are mainly determined by their altitude and exposure to north-easterly trade winds. The main objective of this study was to compare the thermohygrometric conditions of three juniper woodlands: La Dehesa (north-west face at 528 m a.s.l.), El Julan (south face at 996 m a.s.l.) and Sabinosa (north face at 258 m a.s.l.). They are located at different altitude and orientation in El Hierro and present different recovery rates. We used air sensor data loggers fixed to tree branches for recording hourly temperature and humidity data in the three study areas. We analysed daily data of three annual cycles (from September 2012 to August 2015). Similar thermohygrometric annual cycles among the three study areas were observed. We detected the largest differences in winter temperature and summer humidity between the north (to windward) (Sabinosa and La Dehesa) and south (to leeward) (El Julan) faces of the island. The juniper woodland with a highest recovery rate (El Julan) showed the most extreme temperature conditions in both winter and summer seasons. The results of this project might contribute to the knowledge of the juniper bioclimatology in El Hierro, where there is the biggest population of Juniperus turbinata throughout the Canary Islands.

Trees in the city: valuing street trees in Portland, Oregon

Science.gov (United States)

G.H. Donovan; D.T. Butry

2010-01-01

We use a hedonic price model to simultaneously estimate the effects of street trees on the sales price and the time-on-market (TOM) of houses in Portland. Oregon. On average, street trees add $8,870 to sales price and reduce TOM by 1.7 days. In addition, we found that the benefits of street trees spill over to neighboring houses. Because the provision and maintenance...

Bryophytes from Simeonof Island in the Shumagin Islands, southwestern Alaska

Science.gov (United States)

Schofield, W.B.; Talbot, S. S.; Talbot, S.L.

2004-01-01

Simeonof Island is located south of the Alaska Peninsula in the hyperoceanic sector of the middle boreal subzone. We examined the bryoflora of Simeonof Island to determine species composition in an area where no previous collections had been reported. This field study was conducted in sites selected to represent the spectrum of environmental variation within Simeonof Island. Data were analyzed using published reports to compare bryophyte distribution patterns at three levels, the Northern Hemisphere, North America, and Alaska. A total of 271 bryophytes were identified: 202 mosses and 69 liverworts. The annotated list of species for Simeonof Island expands the known range for many species and fills distribution gaps within Hulte??n's Western Pacific Coast district. Maps and notes on the distribution of 14 significant distribution records are presented. Compared with bryophyte distribution in the Northern Hemisphere, the bryoflora of Simeonof Island primarily includes taxa of boreal (55%), temperate (20%), arctic (10%), and cosmopolitan (8%) distribution; 6% of the moss flora are western North America endemics. A description of the bryophytes present in the vegetation and habitat types is provided as is a quantitative analysis of the most frequently occurring bryophytes in crowberry heath.

On the form of species–area relationships in habitat islands and true islands

DEFF Research Database (Denmark)

Matthews, Thomas J.; Guilhaumon, François; Triantis, Kostas A.

2016-01-01

and c vary between different island types. Location: Global. Methods: We used an information theoretic approach to compare the fit of 20 ISAR models to 207 habitat island datasets. Model performance was ranked according to pre-set criteria, including metrics of generality and efficiency. We also fitted......, and was the highest ranked model overall. In general, the more complex models performed badly. Average z-values were significantly lower for habitat island datasets than for true islands, and were higher for mountaintop and urban habitat islands than for other habitat island types. Average c-values were significantly...... multimodel comparisons demonstrated the nonlinear implementation of the power model to be the best overall model and thus to be a sensible choice for general use. As the z-value of the log–log power model varied in relation to ecological and geographical properties of the study systems, caution should...

Island formation without attractive interaction

NARCIS (Netherlands)

Jansen, A.P.J.

2008-01-01

We show that adsorbates on surfaces can form islands even if there are no attractive interactions. Instead, strong repulsion between adsorbates at short distances can lead to islands, because such islands increase the entropy of the adsorbates that are not part of the islands. We suggest that this

Urban tree growth modeling

Science.gov (United States)

E. Gregory McPherson; Paula J. Peper

2012-01-01

This paper describes three long-term tree growth studies conducted to evaluate tree performance because repeated measurements of the same trees produce critical data for growth model calibration and validation. Several empirical and process-based approaches to modeling tree growth are reviewed. Modeling is more advanced in the fields of forestry and...

Electron Tree

DEFF Research Database (Denmark)

Appelt, Ane L; Rønde, Heidi S

2013-01-01

The photo shows a close-up of a Lichtenberg figure – popularly called an “electron tree” – produced in a cylinder of polymethyl methacrylate (PMMA). Electron trees are created by irradiating a suitable insulating material, in this case PMMA, with an intense high energy electron beam. Upon discharge......, during dielectric breakdown in the material, the electrons generate branching chains of fractures on leaving the PMMA, producing the tree pattern seen. To be able to create electron trees with a clinical linear accelerator, one needs to access the primary electron beam used for photon treatments. We...... appropriated a linac that was being decommissioned in our department and dismantled the head to circumvent the target and ion chambers. This is one of 24 electron trees produced before we had to stop the fun and allow the rest of the accelerator to be disassembled....

Classification and regression trees

CERN Document Server

Breiman, Leo; Olshen, Richard A; Stone, Charles J

1984-01-01

The methodology used to construct tree structured rules is the focus of this monograph. Unlike many other statistical procedures, which moved from pencil and paper to calculators, this text's use of trees was unthinkable before computers. Both the practical and theoretical sides have been developed in the authors' study of tree methods. Classification and Regression Trees reflects these two sides, covering the use of trees as a data analysis method, and in a more mathematical framework, proving some of their fundamental properties.

Patterns of diversification in islands: A comparative study across three gecko genera in the Socotra Archipelago.

Science.gov (United States)

Garcia-Porta, Joan; Morales, Hernán E; Gómez-Díaz, Elena; Sindaco, Roberto; Carranza, Salvador

2016-05-01

In this study we used the complete fauna of geckos of the Socotra Archipelago to test whether the three gecko genera co-occurring in the islands (Pristurus, Hemidactylus and Haemodracon) produced similar outcomes of morphological and climatic diversification. To test this, we produced a time-calibrated tree of 346 geckos including all 16 endemic species of the archipelago and 26 potential close-relatives in the continent. Our dating estimates revealed that most of the diversity of geckos in the archipelago was the consequence of in situ diversification. However not all genera shared similar patterns of diversification. While in Hemidactylus and Haemodracon this involved great differences in body size and low levels of climatic diversification (mostly involving sympatric distributions), an opposite pattern appeared in Pristurus in which most of the diversification involved shifts in climatic envelopes (mostly involving allopatric and parapatric distributions) but almost no size differentiation. Consistently with this, Pristurus was the only genus in which rates of size diversification in islands were substantially lower than in the continent. This illustrates how different groups can greatly differ in their patterns of intra-island diversification and highlights the importance of taxon-dependent factors at determining different patterns of diversification in the same insular context. Copyright © 2016 Elsevier Inc. All rights reserved.

FB-Tree: A B+-Tree for Flash-Based SSDs

DEFF Research Database (Denmark)

Jørgensen, Martin V.; Rasmussen, René B.; Saltenis, Simonas

2011-01-01

Due to their many advantages, flash-based SSDs (Solid-State Drives) have become a mainstream alternative to magnetic disks for database servers. Nevertheless, database systems, designed and optimized for magnetic disks, still do not fully exploit all the benefits of the new technology. We propose....... As a consequence, the FB-tree outperforms a regular B+-tree in all scenarios tested. For instance, the throughput of a random workload of 75% updates increases by a factor of three using only two times the space of the B+-tree....

Tales of island tails

NARCIS (Netherlands)

Groot, de Alma V.; Oost, Albert P.; Veeneklaas, Roos M.; Lammerts, Evert Jan; Duin, van Willem E.; Wesenbeeck, van Bregje K.

2016-01-01

The Frisian islands (Southern North Sea) have extensive island tails, i.e. the entire downdrift side of an island consisting of salt marshes, dunes, beaches and beach plains, and green beaches. Currently, large parts of these tails are ageing and losing dynamics, partly due to human influence.

Benefit-based tree valuation

Science.gov (United States)

E.G. McPherson

2007-01-01

Benefit-based tree valuation provides alternative estimates of the fair and reasonable value of trees while illustrating the relative contribution of different benefit types. This study compared estimates of tree value obtained using cost- and benefit-based approaches. The cost-based approach used the Council of Landscape and Tree Appraisers trunk formula method, and...

Fragmentation of random trees

International Nuclear Information System (INIS)

Kalay, Z; Ben-Naim, E

2015-01-01

We study fragmentation of a random recursive tree into a forest by repeated removal of nodes. The initial tree consists of N nodes and it is generated by sequential addition of nodes with each new node attaching to a randomly-selected existing node. As nodes are removed from the tree, one at a time, the tree dissolves into an ensemble of separate trees, namely, a forest. We study statistical properties of trees and nodes in this heterogeneous forest, and find that the fraction of remaining nodes m characterizes the system in the limit N→∞. We obtain analytically the size density ϕ s of trees of size s. The size density has power-law tail ϕ s ∼s −α with exponent α=1+(1/m). Therefore, the tail becomes steeper as further nodes are removed, and the fragmentation process is unusual in that exponent α increases continuously with time. We also extend our analysis to the case where nodes are added as well as removed, and obtain the asymptotic size density for growing trees. (paper)

Energy Self-Sufficient Island

International Nuclear Information System (INIS)

Bratic, S.; Krajacic, G.; Duic, N.; Cotar, A.; Jardas, D.

2011-01-01

In order to analyze energy self-sufficient island, example of a smaller island, connected to the power system of a bigger island with an undersea cable, was taken. Mounting substation 10/0,4 is situated on the island and for the moment it provides enough electricity using the medium voltage line. It is assumed that the island is situated on the north part of the Adriatic Sea. The most important problem that occurs on the island is the population drop that occurs for a significant number of years, therefore, life standard needs to be improved, and economic development needs to be encouraged immediately. Local authorities to stimulate sustainable development on the island through different projects, to breath in a new life to the island, open new jobs and attract new people to come live there. Because of the planned development and increase of the population, energy projects, planned as a support to sustainable development, and later achievement of the energy self-sufficiency, is described in this paper. Therefore, Rewisland methodology appliance is described taking into the account three possible scenarios of energy development. Each scenario is calculated until year 2030. Also, what is taken into the account is 100% usage of renewable sources of energy in 2030. Scenario PTV, PP, EE - This scenario includes installation of solar photovoltaic modules and solar thermal collectors on the buildings roofs, as well as well as implementation of energy efficiency on the island (replacement of the street light bulbs with LED lightning, replacement of the old windows and doors on the houses, as well as the installation of the thermal insulation). Scenario PV island - This scenario, similarly to the previous one, includes installation of solar photovoltaic modules and solar thermal collectors an the residential buildings, as well as the 2 MW photovoltaic power plant and ''Green Hotel'', a building that satisfies all of its energy needs completely from renewable energy sources

FTAP, Minimal Cut Sets of Arbitrary Fault Trees. FRTPLT, Fault Tree Structure and Logical Gates Plot for Program FTAP. FRTGEN, Fault Trees by Sub-tree Generator from Parent Tree for Program FTAP

International Nuclear Information System (INIS)

Willie, Randall R.; Rabien, U.

1997-01-01

1 - Description of problem or function: FTAP is a general-purpose program for deriving minimal reliability cut and path set families from the fault tree for a complex system. The program has a number of useful features that make it well-suited to nearly all fault tree applications. An input fault tree may specify the system state as any logical function of subsystem or component state variables or complements of these variables; thus, for instance, 'exclusive-or' type relations may be formed. When fault tree logical relations involve complements of state variables, the analyst may instruct FTAP to produce a family of prime implicants, a generalization of the minimal cut set concept. The program offers the flexibility of several distinct methods of generating cut set families. FTAP can also identify certain subsystems as system modules and provide a collection of minimal cut set families that essentially expresses the system state as a function of these module state variables. Another feature allows a useful subfamily to be obtained when the family of minimal cut sets or prime implicants is too large to be found in its entirety; this subfamily may consist of only those sets not containing more than some fixed number of elements or only those sets 'interesting' to the analyst in some special sense. Finally, the analyst can modify the input fault tree in various ways by declaring state variables identically true or false. 2 - Method of solution: Fault tree methods are based on the observation that the system state, either working or failed, can usually be expressed as a Boolean relation between states of several large, readily identifiable subsystems. The state of each subsystem in turn depends on states of simpler subsystems and components which compose it, so that the state of the system itself is determined by a hierarchy of logical relationships between states of subsystems. A fault tree is a graphical representation of these relationships. 3 - Restrictions on the

One million served: Rhode Island`s recycling facility

Energy Technology Data Exchange (ETDEWEB)

Malloy, M.G.

1997-11-01

Rhode Island`s landfill and adjacent materials recovery facility (MRF) in Johnston, both owned by the quasi-public Rhode Island Resource Recovery Corp. (RIRRC, Johnston), serve the entire state. The $12-million recycling facility was built in 1989 next to the state`s sole landfill, the Central Landfill, which accepts only in-state trash. The MRF is operated for RIRRC by New England CRInc. (Hampton, N.H.), a unit of Waste Management, Inc. (WMI, Oak Brook, Ill.). It handles a wide variety of materials, from the usual newspaper, cardboard, and mixed containers to new streams such as wood waste, scrap metal, aseptic packaging (milk and juice boxes), and even textiles. State municipalities are in the process of adding many of these new recyclable streams into their curbside collection programs, all of which feed the facility.

Winter Birch Trees

Science.gov (United States)

Sweeney, Debra; Rounds, Judy

2011-01-01

Trees are great inspiration for artists. Many art teachers find themselves inspired and maybe somewhat obsessed with the natural beauty and elegance of the lofty tree, and how it changes through the seasons. One such tree that grows in several regions and always looks magnificent, regardless of the time of year, is the birch. In this article, the…

36 CFR 223.4 - Exchange of trees or portions of trees.

Science.gov (United States)

2010-07-01

... 36 Parks, Forests, and Public Property 2 2010-07-01 2010-07-01 false Exchange of trees or portions of trees. 223.4 Section 223.4 Parks, Forests, and Public Property FOREST SERVICE, DEPARTMENT OF AGRICULTURE SALE AND DISPOSAL OF NATIONAL FOREST SYSTEM TIMBER General Provisions § 223.4 Exchange of trees or...

How many trees are enough? Tree death and the urban canopy

Science.gov (United States)

Lara A. Roman

2014-01-01

Massive city tree planting campaigns have invigorated the urban forestry movement, and engaged politicians, planners, and the public in urban greening. Million tree initiatives have been launched in Los Angeles, CA; Denver, CO; New York City, NY; Philadelphia, PA, and other cities. Sacramento, CA even has a five million tree program. These...

Keeping trees as assets

Science.gov (United States)

Kevin T. Smith

2009-01-01

Landscape trees have real value and contribute to making livable communities. Making the most of that value requires providing trees with the proper care and attention. As potentially large and long-lived organisms, trees benefit from commitment to regular care that respects the natural tree system. This system captures, transforms, and uses energy to survive, grow,...

Immigrants, islandness and perceptions of quality-of-life on Prince Edward Island, Canada

Directory of Open Access Journals (Sweden)

Peter Kitchen

2014-11-01

Full Text Available This paper explores perceptions of immigrant quality-of-life (QOL and islandness in Charlottetown, Prince Edward Island, Canada, and compares these perceptions to those of Canadian-born residents of the same provincial capital. The study employed a mixed-methods approach, including a household telephone survey conducted in the summer of 2012 (n=302, focus group interviews with immigrants in late 2012 and observations on preliminary results by the staff of the PEI Association of Newcomers to Canada (PEIANC, the primary immigrant settlement service agency on the island. The analysis of the results suggests that immigrants have a high and undifferentiated assessment of their own QOL, sense of belonging and sense of place compared to Canadian-born islanders; immigrants are also critical of the quality of education and of the range of recreational and cultural events underway on the Island. While they express positive sentiments regarding life on the Island, immigrants still feel excluded from social and economic opportunities.

Visualization of Uncertain Contour Trees

DEFF Research Database (Denmark)

Kraus, Martin

2010-01-01

Contour trees can represent the topology of large volume data sets in a relatively compact, discrete data structure. However, the resulting trees often contain many thousands of nodes; thus, many graph drawing techniques fail to produce satisfactory results. Therefore, several visualization methods...... were proposed recently for the visualization of contour trees. Unfortunately, none of these techniques is able to handle uncertain contour trees although any uncertainty of the volume data inevitably results in partially uncertain contour trees. In this work, we visualize uncertain contour trees...... by combining the contour trees of two morphologically filtered versions of a volume data set, which represent the range of uncertainty. These two contour trees are combined and visualized within a single image such that a range of potential contour trees is represented by the resulting visualization. Thus...

Evolution on a volcanic conveyor belt: using phylogeographic reconstructions and K-Ar-based ages of the Hawaiian Islands to estimate molecular evolutionary rates.

Science.gov (United States)

Fleischer, R C; McIntosh, C E; Tarr, C L

1998-04-01

The Hawaiian Islands form as the Pacific Plate moves over a 'hot spot' in the earth's mantle where magma extrudes through the crust to build huge shield volcanos. The islands subside and erode as the plate carries them to the north-west, eventually to become coral atolls and seamounts. Thus islands are ordered linearly by age, with the oldest islands in the north-west (e.g. Kauai at 5.1 Ma) and the youngest in the south-east (e.g. Hawaii at 0.43 Ma). K-Ar estimates of the date of an island's formation provide a maximum age for the taxa inhabiting the island. These ages can be used to calibrate rates of molecular change under the following assumptions: (i) K-Ar dates are accurate; (ii) tree topologies show that derivation of taxa parallels the timing of island formation; (iii) populations do not colonize long after island emergence; (iv) the coalescent point for sister taxa does not greatly predate the formation of the colonized younger island; (v) saturation effects and (vi) among-lineage rate variation are minimal or correctable; and (vii) unbiased standard errors of distances and regressions can be estimated from multiple pairwise comparisons. We use the approach to obtain overall corrected rate calibrations for: (i) part of the mitochondrial cytochrome b gene in Hawaiian drepanidines (0.016 sequence divergence/Myr); (ii) the Yp1 gene in Hawaiian Drosophila (0.019/Myr Kambysellis et al. 1995); and (iii) parts of the mitochondrial 12S and 16S rRNA and tRNAval in Laupala crickets (0.024-0.102/Myr, Shaw 1996). We discuss the reliability of the estimates given the assumptions (i-vii) above and contrast the results with previous calibrations of Adh in Hawaiian Drosophila and chloroplast DNA in lobeliods.

Pathogenicity island mobility and gene content.

Energy Technology Data Exchange (ETDEWEB)

Williams, Kelly Porter

2013-10-01

Key goals towards national biosecurity include methods for analyzing pathogens, predicting their emergence, and developing countermeasures. These goals are served by studying bacterial genes that promote pathogenicity and the pathogenicity islands that mobilize them. Cyberinfrastructure promoting an island database advances this field and enables deeper bioinformatic analysis that may identify novel pathogenicity genes. New automated methods and rich visualizations were developed for identifying pathogenicity islands, based on the principle that islands occur sporadically among closely related strains. The chromosomally-ordered pan-genome organizes all genes from a clade of strains; gaps in this visualization indicate islands, and decorations of the gene matrix facilitate exploration of island gene functions. A %E2%80%9Clearned phyloblocks%E2%80%9D method was developed for automated island identification, that trains on the phylogenetic patterns of islands identified by other methods. Learned phyloblocks better defined termini of previously identified islands in multidrug-resistant Klebsiella pneumoniae ATCC BAA-2146, and found its only antibiotic resistance island.

Molecular and optical properties of tree-derived dissolved organic matter in throughfall and stemflow from live oaks and eastern red cedar

Science.gov (United States)

Stubbins, Aron; Silva, Leticia M.; Dittmar, Thorsten; Van Stan, John T.

2017-03-01

Studies of dissolved organic matter (DOM) transport through terrestrial aquatic systems usually start at the stream. However, the interception of rainwater by vegetation marks the beginning of the terrestrial hydrological cycle making trees the headwaters of aquatic carbon cycling. Rainwater interacts with trees picking up tree-DOM, which is then exported from the tree in stemflow and throughfall. Stemflow denotes water flowing down the tree trunk, while throughfall is the water that drips through the leaves of the canopy. We report the concentrations, optical properties (light absorbance) and molecular signatures (ultrahigh resolution mass spectrometry) of tree-DOM in throughfall and stemflow from two tree species (live oak and eastern red cedar) with varying epiphyte cover on Skidaway Island, Savannah, Georgia, USA. Both stemflow and throughfall were enriched in DOM compared to rainwater, indicating trees were a significant source of DOM. The optical and molecular properties of tree-DOM were broadly consistent with those of DOM in other aquatic ecosystems. Stemflow was enriched in highly colored DOM compared to throughfall. Elemental formulas identified clustered the samples into three groups: oak stemflow, oak throughfall and cedar. The molecular properties of each cluster are consistent with an autochthonous aromatic-rich source associated with the trees, their epiphytes and the microhabitats they support. Elemental formulas enriched in oak stemflow were more diverse, enriched in aromatic formulas, and of higher molecular mass than for other tree-DOM classes, suggesting greater contributions from fresh and partially modified plant-derived organics. Oak throughfall was enriched in lower molecular weight, aliphatic and sugar formulas, suggesting greater contributions from foliar surfaces. While the optical properties and the majority of the elemental formulas within tree-DOM were consistent with vascular plant-derived organics, condensed aromatic formulas were

Increased water use efficiency does not prevent growth decline of Pinus canariensis in a semi-arid treeline ecotone in Tenerife, Canary Islands (Spain).

Science.gov (United States)

Brito, Patricia; Grams, Thorsten E E; Matysssek, Rainer; Jimenez, Maria S; Gonzalez-Rodríguez, Agueda M; Oberhuber, Walter; Wieser, Gerhard

2016-09-01

Intrinsic water-use efficiency of Pinus canariensis (Sweet ex Spreng.) growing at a semi-arid treeline has increased during the past 37 years. Tree-ring width by contrast has declined, likely caused by reduced stomatal conductance due to increasing aridity. Rising atmospheric CO 2 concentration ( C a ) has been related to tree growth enhancement accompanied by increasing intrinsic water-use-efficiency (iWUE). Nevertheless, the extent of rising C a on long-term changes in iWUE and growth has remained poorly understood to date in Mediterranean treeline ecosystems. This study aimed to examine radial growth and physiological responses of P. canariensis in relation to rising C a and increasing aridity at treeline in Tenerife, Canary Islands, Spain. We evaluated temporal changes in secondary growth (tree-ring width; TRW) and tree ring stable C isotope signature for assessing iWUE from 1975 through 2011. Precipitation was the main factor controlling secondary growth. Over the last 36 years P. canariensis showed a decline in TRW at enhanced iWUE, likely caused by reduced stomatal conductance due to increasing aridity. Our results indicate that increasing aridity has overridden the potential CO 2 fertilization on tree growth of P. canariensis at its upper distribution limit.

First record of the mycoheterotrophic orchid Gastrodia fontinalis (Orchidaceae from Takeshima Island, the Ryukyu Islands, Japan

Directory of Open Access Journals (Sweden)

Kenji Suetsugu

2014-12-01

Full Text Available We found Gastrodia fontinalis T. P. Lin in a bamboo forest from Takeshima Island, which is the northernmost island of the Ryukyu Islands in Japan. This species is apparently rare and was previously considered to be an endemic Taiwanese species. Because there are a few minor differences between the original description and our specimens collected in Takeshima Island, here we report Gastrodia fontinalis from Takeshima Island as the first record outside of Taiwan, with a description of the specimens from Takeshima Island.

Forest FIRE and FIRE wood : tools for tree automata and tree algorithms

NARCIS (Netherlands)

Cleophas, L.G.W.A.; Piskorski, J.; Watson, B.W.; Yli-Jyrä, A.

2009-01-01

Pattern matching, acceptance, and parsing algorithms on node-labeled, ordered, ranked trees ('tree algorithms') are important for applications such as instruction selection and tree transformation/term rewriting. Many such algorithms have been developed. They often are based on results from such

Renewable energy islands in Europe

Energy Technology Data Exchange (ETDEWEB)

Oestergaard, Iben [ed.

1998-12-31

This publication includes a compiled presentation of various aspects concerning the possible transformation of some European islands into renewable energy communities and these projects were presented by a selection of pioneer islands at the first European Seminar on Renewable Energy Islands, held on the Danish island of Samsoee, 29-30 June 1998. This issue has increased in importance with the presentation of the ambitious EU-White Paper: `Energy for the future: Renewable Sources of Energy` which was adopted in 1998. One of the key elements of the strategy for an accelerated implementation of renewable energy is to transform 100 localities within Europe into communities which are to be 100% self-sufficient with renewable energy before 2010. In line with this strategy, the Danish Government appointed the island of Samsoe towards the end of 1997 to be the first `official` Danish, renewable energy island. This is to serve as a demonstration project for other local communities, both in Denmark as well as in the rest Europe. Gothland, Madeira, Canary Islands, Cape Verde, Arki, Crete, Minorca and Orkney Islands were represented. Environmental advantages of wind, solar and wave power for distant island communities were indicated. Serious savings would be achieved by limitation of fossil fuel import and utilization of local resources. (EG)

Barrier island habitat map and vegetation survey—Dauphin Island, Alabama, 2015

Science.gov (United States)

Enwright, Nicholas M.; Borchert, Sinéad M.; Day, Richard H.; Feher, Laura C.; Osland, Michael J.; Wang, Lei; Wang, Hongqing

2017-08-04

Barrier islands are dynamic environments due to their position at the land-sea interface. Storms, waves, tides, currents, and relative sea-level rise are powerful forces that shape barrier island geomorphology and habitats (for example, beach, dune, marsh, and forest). Hurricane Katrina in 2005 and the Deep Water Horizon oil spill in 2010 are two major events that have affected habitats and natural resources on Dauphin Island, Alabama. The latter event prompted a collaborative effort between the U.S. Geological Survey, the U.S. Army Corps of Engineers, and the State of Alabama funded by the National Fish and Wildlife Foundation to investigate viable, sustainable restoration options that protect and restore the natural resources of Dauphin Island, Alabama.In order to understand the feasibility and sustainability of various restoration scenarios, it is important to understand current conditions on Dauphin Island. To further this understanding, a detailed 19-class habitat map for Dauphin Island was produced from 1-foot aerial infrared photography collected on December 4, 2015, and lidar data collected in January 2015. We also conducted a ground survey of habitat types, vegetation community structure, and elevations in November and December 2015. These products provide baseline data regarding the ecological and general geomorphological attributes of the area, which can be compared with observations from other dates for tracking changes over time.

Monitoring Million Trees LA: Tree performance during the early years and future benefits

Science.gov (United States)

E. Gregory McPherson

2014-01-01

Million Trees LA (MTLA) is one of several large-scale mayoral tree planting initiatives striving to create more livable cities through urban forestry. This study combined field sampling of tree survival and growth with numerical modeling of future benefits to assess performance of MTLA plantings. From 2006 to 2010 MTLA planted a diverse mix of 91,786 trees....

33 CFR 80.712 - Morris Island, SC to Hilton Head Island, SC.

Science.gov (United States)

2010-07-01

... 33 Navigation and Navigable Waters 1 2010-07-01 2010-07-01 false Morris Island, SC to Hilton Head..., SC to Hilton Head Island, SC. (a) A line drawn from the easternmost tip of Folley Island to the... easternmost extremity of Hilton Head at latitude 32°13.0′ N. longitude 80°40.1′ W. [CGD 77-118a, 42 FR 35784...

Island dynamics and Minoan expansion in the Aegean: the Kythera Island Project

Directory of Open Access Journals (Sweden)

Cyprian Broodbank

1999-11-01

Full Text Available In recent years archaeologists have become increasingly interested in the investigation of island societies. At a global level, discoveries in the Pacific, Caribbean, Mediterranean and elsewhere have greatly improved our understanding of the antiquity and dynamics of island life. Now archaeologists at the Institute, together with other colleagues, have embarked on a long-term interdisciplinary study of the island of Kythera in the Aegean.

Skewed Binary Search Trees

DEFF Research Database (Denmark)

Brodal, Gerth Stølting; Moruz, Gabriel

2006-01-01

It is well-known that to minimize the number of comparisons a binary search tree should be perfectly balanced. Previous work has shown that a dominating factor over the running time for a search is the number of cache faults performed, and that an appropriate memory layout of a binary search tree...... can reduce the number of cache faults by several hundred percent. Motivated by the fact that during a search branching to the left or right at a node does not necessarily have the same cost, e.g. because of branch prediction schemes, we in this paper study the class of skewed binary search trees....... For all nodes in a skewed binary search tree the ratio between the size of the left subtree and the size of the tree is a fixed constant (a ratio of 1/2 gives perfect balanced trees). In this paper we present an experimental study of various memory layouts of static skewed binary search trees, where each...

The ghosts of trees past: savanna trees create enduring legacies in plant species composition.

Science.gov (United States)

Stahlheber, Karen A; Crispin, Kimberly L; Anton, Cassidy; D'Antonio, Carla M

2015-09-01

Isolated trees in savannas worldwide are known to modify their local environment and interact directly with neighboring plants. Less is known about how related tree species differ in their impacts on surrounding communities, how the effects of trees vary between years, and how composition might change following loss of the tree. To address these knowledge gaps, we explored the following questions: How do savanna trees influence the surrounding composition of herbaceous plants? Is the influence of trees consistent across different species and years? How does this change following the death of the tree? We surveyed herbaceous species composition and environmental attributes surrounding living and dead evergreen and deciduous Quercus trees in California (USA) savannas across several years that differed in their total precipitation. Oak trees of all species created distinct, homogenous understory communities dominated by exotic grasses across several sites. The composition of the low-diversity understory communities showed less interannual variation than open grassland, despite a two-fold difference in precipitation between the driest and wettest year. Vegetation composition was correlated with variation in soil properties, which were strongly affected by trees. Oaks also influenced the communities beyond the edge of the crown, but this depended on site and oak species. Low-diversity understory communities persisted up to 43 years following the death of the tree. A gradual decline in the effect of trees on the physical, environment following death did not result in vegetation becoming more similar to open grassland over time. The presence of long-lasting legacies of past tree crowns highlights the difficulty of assigning control of the current distribution of herbaceous species in grassland to their contemporary environment.

Vegetation and checklist of Inaccessible Island, central South Atlantic Ocean, with notes on Nightingale Island

Directory of Open Access Journals (Sweden)

J. P. Roux

1992-10-01

Full Text Available The physiography and climate of Inaccessible and Nightingale Islands are briefly discussed. The vegetation and the major plant associations are described. Notes are given on the ecology and distribution of each taxon. Taxa newly recorded for Inaccessible Island include Agrostis goughensis, A.holgateana, A. wacei, Calamagrostis deschampsiiformis, Carex thouarsii var.  recurvata, Conyza albida, Elaphoglossum campylolepium and  Uncinia meridensis. One species, C.  albida, is alien to the Tristan group. Two native ferns Asplenium platybasis var.  subnudum and Blechnum australe were found on Nightingale Island for the first time, and the presence of introduced Malus domestica orchards was recorded. Two unidentified taxa were found that may represent new species:  Elaphoglossum sp. at Inaccessible Island and Apium sp. at both Inaccessible and Nightingale Islands. The total number of vascular plant species recorded at Inaccessible and Nightingale Islands now stands at 98 and 43, respectively, of which 26 (28% and seven (16% are introduced species. Only Airiplex plebeja and two species of Cotula occur at Nightingale Island but are absent from Inaccessible Island.

Marshall Islands

OpenAIRE

World Bank

2015-01-01

This note aims to build understanding of the existing disaster risk financing and insurance (DRFI) tools in use in The Marshall Islands and to identify gaps where potential engagement could further develop financial resilience. The likelihood that a hazardous event will have a significant impact on the Marshall Islands has risen with the increasing levels of population and assets in the urban ...

Recursive Trees for Practical ORAM

Directory of Open Access Journals (Sweden)

Moataz Tarik

2015-06-01

Full Text Available We present a new, general data structure that reduces the communication cost of recent tree-based ORAMs. Contrary to ORAM trees with constant height and path lengths, our new construction r-ORAM allows for trees with varying shorter path length. Accessing an element in the ORAM tree results in different communication costs depending on the location of the element. The main idea behind r-ORAM is a recursive ORAM tree structure, where nodes in the tree are roots of other trees. While this approach results in a worst-case access cost (tree height at most as any recent tree-based ORAM, we show that the average cost saving is around 35% for recent binary tree ORAMs. Besides reducing communication cost, r-ORAM also reduces storage overhead on the server by 4% to 20% depending on the ORAM’s client memory type. To prove r-ORAM’s soundness, we conduct a detailed overflow analysis. r-ORAM’s recursive approach is general in that it can be applied to all recent tree ORAMs, both constant and poly-log client memory ORAMs. Finally, we implement and benchmark r-ORAM in a practical setting to back up our theoretical claims.

A man and his island: The island mirror in Michael Crummey’s Sweetland

Directory of Open Access Journals (Sweden)

Laurie Brinklow

2016-05-01

Full Text Available Between 1946 and 1975, dozens of islands and outports in the Canadian province of Newfoundland and Labrador were abandoned as part of a government resettlement policy. Families and communities were torn apart, and a culture and way of life that revolved around the fishery changed irrevocably. The practice, which continues to this day, has been well documented, particularly by artists and writers. Michael Crummey’s 2014 novel Sweetland is a recent iteration. The relationship between humans and place is complex: on an island, with compressed space and a very real boundary that is the ocean, emotional attachments to one’s place are often heightened and distilled. What happens when a person is displaced from his or her island; when bonds of attachment are severed and one’s mirrored double is destroyed? Sweetland offers a fictional lens through which we see an example of a mirrored relationship between an island protagonist and his island setting. Exploring themes of attachment to place, and what Barry Lopez calls a “storied” or “reciprocal” relationship with the land, this paper examines what happens to a man when confronted with leaving an island he knows as deeply as his own body and soul; and how the island reacts.

Genetic consequences of anagenetic speciation in Acer okamotoanum (Sapindaceae) on Ullung Island, Korea.

Science.gov (United States)

Takayama, Koji; Sun, Byung-Yun; Stuessy, Tod F

2012-02-01

Anagenesis (also known as phyletic speciation) is an important process of speciation in endemic species of oceanic islands. We investigated genetic variation in Acer okamotoanum, an anagenetically derived species endemic to Ullung Island, South Korea, to infer genetic consequences of anagenesis in comparison with other groups that have undergone cladogenesis (and adaptive radiation). We examined genetic variation based on eight polymorphic microsatellite markers from 145 individuals of A. okamotoanum and 134 individuals of its putative progenitor A. mono. We employed standard population genetic analyses, clustering analyses, Bayesian clustering analyses in STRUCTURE and bottleneck analyses. Based on both the Neighbor-Joining tree and Bayesian clustering analyses, clear genetic distinctions were found between the two species. Genetic diversity in terms of allelic richness and heterozygosity shows slightly lower levels in A. okamotoanum in comparison with A. mono. Bayesian clustering analyses showed a relatively high F-value in the cluster of A. okamotoanum, suggesting a strong episode of genetic drift during colonization and speciation. There was no clear evidence of a bottleneck based on allelic frequency distribution and excess of observed heterozygotes, but the M-ratio indicated a historical bottleneck in several populations of A. okamotoanum. No geographical genetic structure within the island was found, and the genetic variation among populations of A. okamotoanum was quite low. We hypothesized that genetic consequences of oceanic-endemic plants derived via anagenesis would be quite different from those derived via cladogenesis. Populations of A. okamotoanum form a cluster and are clearly differentiated from A. mono, which suggests a single origin for the anagenetically derived island endemic. No pattern of geographical differentiation of populations occurs in A. okamotoanum, which supports the concept of initial founder populations diverging through time by

Tree Transduction Tools for Cdec

Directory of Open Access Journals (Sweden)

Austin Matthews

2014-09-01

Full Text Available We describe a collection of open source tools for learning tree-to-string and tree-to-tree transducers and the extensions to the cdec decoder that enable translation with these. Our modular, easy-to-extend tools extract rules from trees or forests aligned to strings and trees subject to different structural constraints. A fast, multithreaded implementation of the Cohn and Blunsom (2009 model for extracting compact tree-to-string rules is also included. The implementation of the tree composition algorithm used by cdec is described, and translation quality and decoding time results are presented. Our experimental results add to the body of evidence suggesting that tree transducers are a compelling option for translation, particularly when decoding speed and translation model size are important.

Island development: Local governance under globalization

Directory of Open Access Journals (Sweden)

Huei-Min Tsai

2014-12-01

Full Text Available Issues surrounding island development have generated a growing volume of research. What does it mean to develop? How can island communities maintain control over development processes to the benefit of the local economy, rather than seeing economic flows enter and exit the island with little or a primarily negative impact? And how important is local knowledge for edifying local governance and enhancing potentials for innovation in island development? Island histories have repeatedly been forwarded as exemplars and ‘lessons’ for global learning on (unsustainability. To consider these issues, we have selected a number of papers from among the presentations given at the International Geographical Union’s Commission on Islands Conference, Island Development: Local Economy, Culture, Innovation and Sustainability, which took place in the Penghu Archipelago, Taiwan, 1–5 October 2013. These papers serve as examples of how the processes of globalization have penetrated the borders and changed the political and economic structures of islands. They also explore how island-based innovations in science, technology, culture, and formal or informal governance might contribute to sustainable island development.

Bird Pollinator Visitation is Equivalent in Island and Plantation Planting Designs in Tropical Forest Restoration Sites

Directory of Open Access Journals (Sweden)

Ginger M. Thurston

2013-03-01

Full Text Available Active restoration is one strategy to reverse tropical forest loss. Given the dynamic nature of climates, human populations, and other ecosystem components, the past practice of using historical reference sites as restoration targets is unlikely to result in self-sustaining ecosystems. Restoring sustainable ecological processes like pollination is a more feasible goal. We investigated how flower cover, planting design, and landscape forest cover influenced bird pollinator visits to Inga edulis trees in young restoration sites in Costa Rica. I. edulis trees were located in island plantings, where seedlings had been planted in patches, or in plantation plantings, where seedlings were planted to cover the restoration area. Sites were located in landscapes with scant (10–21% or moderate (35–76% forest cover. Trees with greater flower cover received more visits from pollinating birds; neither planting design nor landscape forest cover influenced the number of pollinator visits. Resident hummingbirds and a migratory bird species were the most frequent bird pollinators. Pollination in the early years following planting may not be as affected by details of restoration design as other ecological processes like seed dispersal. Future work to assess the quality of various pollinator species will be important in assessing this idea.

Energy Transition Initiative, Island Energy Snapshot - British Virgin Islands (Fact Sheet)

Energy Technology Data Exchange (ETDEWEB)

2015-03-01

This profile provides a snapshot of the energy landscape of the British Virgin Islands (BVI), one of three sets of the Virgin Island territories in an archipelago making up the northern portion of the Lesser Antilles.

City of Pittsburgh Trees

Data.gov (United States)

Allegheny County / City of Pittsburgh / Western PA Regional Data Center — Trees cared for and managed by the City of Pittsburgh Department of Public Works Forestry Division. Tree Benefits are calculated using the National Tree Benefit...

Flowering Trees

Indian Academy of Sciences (India)

user

Flowering Trees. Gliricidia sepium(Jacq.) Kunta ex Walp. (Quickstick) of Fabaceae is a small deciduous tree with. Pinnately compound leaves. Flower are prroduced in large number in early summer on terminal racemes. They are attractive, pinkish-white and typically like bean flowers. Fruit is a few-seeded flat pod.

Drawing Trees

DEFF Research Database (Denmark)

Halkjær From, Andreas; Schlichtkrull, Anders; Villadsen, Jørgen

2018-01-01

We formally prove in Isabelle/HOL two properties of an algorithm for laying out trees visually. The first property states that removing layout annotations recovers the original tree. The second property states that nodes are placed at least a unit of distance apart. We have yet to formalize three...

Interspecific variation in tree seedlings establishment in canopy gaps in relation to tree density

Energy Technology Data Exchange (ETDEWEB)

Reader, R.J.; Bonser, S.P.; Duralia, T.E.; Bricker, B.D. [Guelph Univ., ON (Canada). Dept. of Botany

1995-10-01

We tested whether interspecific variation in tree seedling establishment in canopy gaps was significantly related to interspecific variation in tree density, for seven deciduous forest tree species (Quercus alba, Hamamelis virginiana, Acer rubrum, Sassafras albidum, Quercus rubra, Prunus serotina, Ostrya virginiana). For each species, seedling establishment was calculated as the difference in seedling density before experimental gap creation versus three years after gap creation. In each of the six experimentally-created gap types (33% or 66% removal of tree basal area from 0.01ha, 0.05ha or 0.20ha patches), differences in seedling establishment among species were significantly related to differences in their density in the tree canopy. A regression model with log{sub e} tree density as the independent variable accounted for between 93% and 98% of interspecific variation in seedling establishment. Our results provide empirical support for models of tree dynamics in gaps that assume seedling establishment depends on canopy tree density. 17 refs, 1 fig, 3 tabs

Demographic Ageing on Croatian Islands

Directory of Open Access Journals (Sweden)

Ivo Nejašmić

2013-08-01

Full Text Available This paper analyses the changes in the population structure of the Croatian islands by age, warns of the degree of ageing, provides spatial differentiation of this process and presents perspective of ageing at the level of settlement. Typing of population ageing is based on scores and has seven types. The total island population in 2011 belongs to the type 5 – very old population. Almost a half of the settlements (out of 303 have been affected by the highest levels of ageing (types 6 and 7. It was found that a quarter of island settlements will become “dead villages” in a foreseeable future; most of them are on small islands but also in the interior of larger islands. These are villages decaying in every respect, in which the way of life, as we know it, veins and goes out. The present ageing villagers are their last residents in most cases. Eve¬rything suggests that demographic recovery of the islands is not possible with the forces in situ. It is important to strike a balance between the needs and opportunities in order to successfully organize life on the islands, both small and large ones, and the fact is that there is a continuing disparity, which is especially profound in small islands. A sensitive and selective approach is needed to overcome the unfavourable demographic trends. Therefore it is necessary to respect the particularities of indi¬vidual islands and island groups in devising development strategy. Solutions to the problems must come of the local and wider community in synergy with relevant professional and scientific institutions. However, if the solutions are not found or measures do not give results, if the islands are left to desorganisation and senilisation, a part of the islands will become a wasteland. With regard to the value of this area whose wealth are people in the first place, this would be an intolerable civilization decline.

The Island Smart Energy System and Market

DEFF Research Database (Denmark)

Ma, Zheng; Billanes, Joy Dalmacio; Jørgensen, Bo Nørregaard

2017-01-01

developing island smart energy systems with the integration of renewable energy resources can increase the energy supply and address the global island energy issues. The island smart energy system operates either in a single-island or in multi-islands. However the island characteristics and influ...

Terrestrial bird population trends on Aguiguan (Goat Island), Mariana Islands

Science.gov (United States)

Amidon, Fred; Camp, Richard J.; Marshall, Ann P.; Pratt, Thane K.; Williams, Laura; Radley, Paul; Cruz, Justine B.

2014-01-01

The island of Aguiguan is part of the Mariana archipelago and currently supports populations of four endemic species, including one endemic genus, Cleptornis. Bird population trends since 1982 were recently assessed on the neighbouring islands of Saipan, Tinian, and Rota indicating declines in some native species. Point-transect surveys were conducted in 2008 by the U.S. Fish and Wildlife Service to assess population densities and trends on Aguiguan. Densities for six of the nine native birds—White-throated Ground-dove Gallicolumba xanthonura, Collared Kingfisher Todiramphus chloris, Rufous Fantail Rhipidura rufifrons, Golden White-eye Cleptornis marchei, Bridled White-eye Zosterops conspicillatus and Micronesian Starling Aplonis opaca—and the non-native bird—Island Collared-dove Streptopelia bitorquata—were significantly greater in 2008 than in 1982. No differences in densities were detected among the surveys for Mariana Fruit-dove Ptilinopus roseicapilla, and Micronesian MyzomelaMyzomela rubratra. Three federally and locally listed endangered birds—Nightingale Reed-warbler Acrocephalus luscinius, Mariana Swiftlet Collocalia bartschi, and Micronesian Megapode Megapodius laperous)—were either not detected during the point-transect counts, the surveys were not appropriate for the species, or the numbers of birds detected were too small to estimate densities. The factors behind the increasing trends for some species are unknown but may be related to increased forest cover on the island since 1982. With declining trends for some native species on neighbouring islands, the increasing and stable trends on Aguiguan is good news for forest bird populations in the region, as Aguiguan populations can help support conservation efforts on other islands in the archipelago.

Diversity hotspots of the laurel forest on Tenerife, Canary Islands: a phylogeographic study of Laurus and Ixanthus.

Science.gov (United States)

Betzin, Anja; Thiv, Mike; Koch, Marcus A

2016-09-01

Macaronesian laurel forest is among the worldwide hotspots of threatened biodiversity. With increasing evidence that woodland composition on the Canary Islands changed dramatically during the last few thousand years, the aim of this study was to find evidence for substantial recent population dynamics of two representative species from laurel forest. Amplified fragment length polymorphism (AFLP) was used to evaluate fine-scaled genetic variation of the paradigmatic tree Laurus novocanariensis (Lauraceae) and a long-lived herbaceous gentian from core laurel forest, Ixanthus viscosus (Gentianaceae), on Tenerife. Bioclimatic variables were analysed to study the respective climate niches. A chloroplast DNA screening was performed to evaluate additional genetic variation. Genetic diversity of the laurel tree showed severe geographic partitioning. On Tenerife, fine-scaled Bayesian clustering of genetic variation revealed a western and an eastern gene pool, separated by a zone of high admixture and with a third major gene pool. Compared with genetic clusters found on the other Canary Islands, the East-West differentiation on Tenerife seems to be more recent than differentiation between islands. This is substantiated by the finding of extremly low levels of chloroplast DNA-based polymorphisms. Ixanthus showed no geographic structuring of genetic variation. Genetic data from Tenerife indicate contemporary gene flow and dispersal on a micro/local scale rather than reflecting an old and relic woodland history. In particular for Laurus, it is shown that this species occupies a broad bioclimatic niche. This is not correlated with its respective distribution of genetic variation, therefore indicating its large potential for contemporary rapid and effective colonization. Ixanthus is more specialized to humid conditions and is mostly found in the natural Monteverde húmedo vegetation types, but even for this species indications for long-term persistence in the respective

Phylogeography of Quercus variabilis based on chloroplast DNA sequence in East Asia: multiple glacial refugia and Mainland-migrated island populations.

Directory of Open Access Journals (Sweden)

Dongmei Chen

Full Text Available The biogeographical relationships between far-separated populations, in particular, those in the mainland and islands, remain unclear for widespread species in eastern Asia where the current distribution of plants was greatly influenced by the Quaternary climate. Deciduous Oriental oak (Quercus variabilis is one of the most widely distributed species in eastern Asia. In this study, leaf material of 528 Q. variabilis trees from 50 populations across the whole distribution (Mainland China, Korea Peninsular as well as Japan, Zhoushan and Taiwan Islands was collected, and three cpDNA intergenic spacer fragments were sequenced using universal primers. A total of 26 haplotypes were detected, and it showed a weak phylogeographical structure in eastern Asia populations at species level, however, in the central-eastern region of Mainland China, the populations had more haplotypes than those in other regions, with a significant phylogeographical structure (N(ST= 0.751> G(ST= 0.690, P<0.05. Q. variabilis displayed high interpopulation and low intrapopulation genetic diversity across the distribution range. Both unimodal mismatch distribution and significant negative Fu's F(S indicated a demographic expansion of Q. variabilis populations in East Asia. A fossil calibrated phylogenetic tree showed a rapid speciation during Pleistocene, with a population augment occurred in Middle Pleistocene. Both diversity patterns and ecological niche modelling indicated there could be multiple glacial refugia and possible bottleneck or founder effects occurred in the southern Japan. We dated major spatial expansion of Q. variabilis population in eastern Asia to the last glacial cycle(s, a period with sea-level fluctuations and land bridges in East China Sea as possible dispersal corridors. This study showed that geographical heterogeneity combined with climate and sea-level changes have shaped the genetic structure of this wide-ranging tree species in East Asia.

Phylogenetic trees in bioinformatics

Energy Technology Data Exchange (ETDEWEB)

Burr, Tom L [Los Alamos National Laboratory

2008-01-01

Genetic data is often used to infer evolutionary relationships among a collection of viruses, bacteria, animal or plant species, or other operational taxonomic units (OTU). A phylogenetic tree depicts such relationships and provides a visual representation of the estimated branching order of the OTUs. Tree estimation is unique for several reasons, including: the types of data used to represent each OTU; the use ofprobabilistic nucleotide substitution models; the inference goals involving both tree topology and branch length, and the huge number of possible trees for a given sample of a very modest number of OTUs, which implies that fmding the best tree(s) to describe the genetic data for each OTU is computationally demanding. Bioinformatics is too large a field to review here. We focus on that aspect of bioinformatics that includes study of similarities in genetic data from multiple OTUs. Although research questions are diverse, a common underlying challenge is to estimate the evolutionary history of the OTUs. Therefore, this paper reviews the role of phylogenetic tree estimation in bioinformatics, available methods and software, and identifies areas for additional research and development.

Fast Tree: Computing Large Minimum-Evolution Trees with Profiles instead of a Distance Matrix

OpenAIRE

N. Price, Morgan

2009-01-01

Gene families are growing rapidly, but standard methods for inferring phylogenies do not scale to alignments with over 10,000 sequences. We present FastTree, a method for constructing large phylogenies and for estimating their reliability. Instead of storing a distance matrix, FastTree stores sequence profiles of internal nodes in the tree. FastTree uses these profiles to implement neighbor-joining and uses heuristics to quickly identify candidate joins. FastTree then uses nearest-neighbor i...

FastTree: Computing Large Minimum Evolution Trees with Profiles instead of a Distance Matrix

OpenAIRE

Price, Morgan N.; Dehal, Paramvir S.; Arkin, Adam P.

2009-01-01

Gene families are growing rapidly, but standard methods for inferring phylogenies do not scale to alignments with over 10,000 sequences. We present FastTree, a method for constructing large phylogenies and for estimating their reliability. Instead of storing a distance matrix, FastTree stores sequence profiles of internal nodes in the tree. FastTree uses these profiles to implement Neighbor-Joining and uses heuristics to quickly identify candidate joins. FastTree then uses nearest neighbor in...

Flowering Trees

Indian Academy of Sciences (India)

Flowering Trees. Acrocarpus fraxinifolius Wight & Arn. (PINK CEDAR, AUSTRALIAN ASH) of. Caesalpiniaceae is a lofty unarmed deciduous native tree that attains a height of 30–60m with buttresses. Bark is thin and light grey. Leaves are compound and bright red when young. Flowers in dense, erect, axillary racemes.

Renewable technologies for generation systems in islands and their application to Cozumel Island, Mexico

OpenAIRE

Mendoza Vizcaino, Javier; Sumper, Andreas; Sudrià Andreu, Antoni; Ramirez, J.M.

2016-01-01

The electric generation systems on islands are based generally on fossil fuel. This fact and its supply make the electricity cost higher than in systems used in the continent. In this article, we present a review of the renewable energy generation systems on islands. To do it we analysed 77 islands from 45 different countries. This work will allow us to know how the implementation of renewable energy sources could help these islands in developing a renewable and sustainable energy sector, inc...

On Tree-Based Phylogenetic Networks.

Science.gov (United States)

Zhang, Louxin

2016-07-01

A large class of phylogenetic networks can be obtained from trees by the addition of horizontal edges between the tree edges. These networks are called tree-based networks. We present a simple necessary and sufficient condition for tree-based networks and prove that a universal tree-based network exists for any number of taxa that contains as its base every phylogenetic tree on the same set of taxa. This answers two problems posted by Francis and Steel recently. A byproduct is a computer program for generating random binary phylogenetic networks under the uniform distribution model.

CRED Gridded Bathymetry near Laysan Island (100-006), Northwestern Hawaiian Islands

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — File 100-006b is a 60-m ASCII grid of depth data collected near Laysan Island in the Northwestern Hawaiian Islands as of May 2003. This grid has been produced as...

CRED Gridded Bathymetry near Lisianski Island (100-001), Northwestern Hawaiian Islands

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — File 100-001b is a 60-m ASCII grid of depth data collected near Lisianski Island in the Northwestern Hawaiian Islands as of May 2003. This grid has been produced as...

75 FR 61993 - Amendment of Class E Airspace; Kwajalein Island, Marshall Islands, RMI

Science.gov (United States)

2010-10-07

...This action removes the reference to the Kwajalein Tactacial Air Navigation (TACAN) System from the legal description of the Class E airspace areas for Kwajalein Island, Bucholz AAF, Marshall Islands, RMI. The U.S. Army notified the FAA that the Kwajalein TACAN was decommissioned. This action corrects the legal descriptions for the Class E airspace areas in the vicinity of the Marshall Islands.

Hydroclimate variability in southwestern Japan over the last 1500 years reconstructed from oxygen isotope ratios in tree rings

Science.gov (United States)

Sano, Masaki; Yasue, Koh; Kimura, Katsuhiko; Nakatsuka, Takeshi

2015-04-01

Recent progress in isotope dendroclimatology indicates that tree-ring δ18O is a promising proxy to precisely reconstruct hydroclimate variability in monsoon Asia. Here we present a 1500-year-long tree-ring δ18O chronology constructed using living and fallen dead trees (Cryptomeria japonia) that were collected in Yakushima Island, southwestern Japan. Core or disc samples were cross-dated by visually matching ring-width patterns. Then, a total of 14 trees were selected for isotopic analysis. We employed the 'plate method' to extract cellulose directly from a 1.0-mm thick wood plate, in order to facilitate the processing of hundreds of rings simultaneously. Each annual ring of cellulose was separated using a razor blade, and its δ18O value was determined using a continuous flow isotope ratio mass spectrometer coupled to an elemental analyzer. The resultant δ18O time series were highly correlated with one another (Rbar: 0.66), indicating that common signals related to regional climate are preserved in all the sampled trees. Since the δ18O series did not show prominent age-related trends, all the series were simply normalized to have the same mean for the overlapping segments. The resulting series were then averaged to build the final chronology. Response analysis with ambient meteorological records for the last 50 years indicates that tree-ring δ18O is mainly controlled by summer (May-September) relative humidity. We therefore interpret our record as a proxy of hydroclimate related to East Asian summer monsoon. Overall low-frequency variations in our chronology are similar to those of a Northern Hemisphere temperature reconstruction. Specifically our record shows a relatively dry (wet) condition during the Medieval Warm Period (the Little Ice Age). Centennial-scale fluctuations of sea surface temperatures in the equatorial Pacific may play a role in modulating long-term hydroclimate changes in southwestern Japan.

A Metric on Phylogenetic Tree Shapes.

Science.gov (United States)

Colijn, C; Plazzotta, G

2018-01-01

The shapes of evolutionary trees are influenced by the nature of the evolutionary process but comparisons of trees from different processes are hindered by the challenge of completely describing tree shape. We present a full characterization of the shapes of rooted branching trees in a form that lends itself to natural tree comparisons. We use this characterization to define a metric, in the sense of a true distance function, on tree shapes. The metric distinguishes trees from random models known to produce different tree shapes. It separates trees derived from tropical versus USA influenza A sequences, which reflect the differing epidemiology of tropical and seasonal flu. We describe several metrics based on the same core characterization, and illustrate how to extend the metric to incorporate trees' branch lengths or other features such as overall imbalance. Our approach allows us to construct addition and multiplication on trees, and to create a convex metric on tree shapes which formally allows computation of average tree shapes. © The Author(s) 2017. Published by Oxford University Press, on behalf of the Society of Systematic Biologists.

Bacteria Removal from Stormwater Runoff Using Tree Filters: A Comparison of a Conventional and an Innovative System

Directory of Open Access Journals (Sweden)

Laura A. Schifman

2016-03-01

Full Text Available Non-point source pollution of stormwater contributes high contaminant loads into surface water bodies and poses a threat to the ecosystem, public health and economy. Although (pretreatment standards have not been introduced at the federal level, Rhode Island (RI has set minimal contaminant reduction standards for stormwater using structural best management practices (BMP. As BMP performance depends highly on geographical location and climate, and the Northeastern United States experiences broad ranges of temperatures throughout the year along with long intermittent periods between precipitation events, stormwater treatment can be challenging. In this field study, two tree filters were evaluated: a conventional unit (CTF with sand/shale mix as filter media, and a modified tree filter (ITF with an added layer of red cedar wood chips amended with 3-(trihydroxysilylpropyldimethyloctadecyl ammonium chloride. Both BMPs were monitored for 346 days primarily for Escherichia coli and polycyclic aromatic hydrocarbons (PAH. Both tree filters met or outperformed RI’s standards for bacteria removal (60% and TSS (85%, making them a good choice for BMP use in this climate. Total suspended solids, E. coli, PAHs, nitrate, and phosphate removal is higher in ITF. A controlled field scale tracer test using E. coli confirmed these results.

Origin and diversification of Hibiscus glaber, species endemic to the oceanic Bonin Islands, revealed by chloroplast DNA polymorphism.

Science.gov (United States)

Takayama, Koji; Ohi-Toma, Tetsuo; Kudoh, Hiroshi; Kato, Hidetoshi

2005-04-01

Abstract Two woody Hibiscus species co-occur in the Bonin Islands of the northwestern Pacific Ocean: Hibiscus glaber Matsum. is endemic to the islands, and its putative ancestral species, Hibiscus tiliaceus L., is widely distributed in coastal areas of the tropics and subtropics. To infer isolating mechanisms that led to speciation of H. glaber and the processes that resulted in co-occurrence of the two closely related species on the Bonin Islands, we conducted molecular phylogenetic analyses on chloroplast DNA (cpDNA) sequences. Materials collected from a wide area of the Pacific and Indian Oceans were used, and two closely related species, Hibiscus hamabo Siebold Zucc. and Hibiscus macrophyllus Roxb., were also included in the analyses. The constructed tree suggested that H. glaber has been derived from H. tiliaceus, and that most of the modern Bonin populations of H. tiliaceus did not share most recent ancestry with H. glaber. Geographic isolation appears to be the most important mechanism in the speciation of H. glaber. The co-occurrence of the two species can be attributed to multiple migrations of different lineages into the islands. While a wide and overlapping geographical distribution of haplotypes was found in H. tiliaceus, localized geographical distribution of haplotypes was detected in H. glaber. It is hypothesized that a shift to inland habitats may have affected the mode of seed dispersal from ocean currents to gravity and hence resulted in geographical structuring of H. glaber haplotypes.

Visualizing phylogenetic tree landscapes.

Science.gov (United States)

Wilgenbusch, James C; Huang, Wen; Gallivan, Kyle A

2017-02-02

Genomic-scale sequence alignments are increasingly used to infer phylogenies in order to better understand the processes and patterns of evolution. Different partitions within these new alignments (e.g., genes, codon positions, and structural features) often favor hundreds if not thousands of competing phylogenies. Summarizing and comparing phylogenies obtained from multi-source data sets using current consensus tree methods discards valuable information and can disguise potential methodological problems. Discovery of efficient and accurate dimensionality reduction methods used to display at once in 2- or 3- dimensions the relationship among these competing phylogenies will help practitioners diagnose the limits of current evolutionary models and potential problems with phylogenetic reconstruction methods when analyzing large multi-source data sets. We introduce several dimensionality reduction methods to visualize in 2- and 3-dimensions the relationship among competing phylogenies obtained from gene partitions found in three mid- to large-size mitochondrial genome alignments. We test the performance of these dimensionality reduction methods by applying several goodness-of-fit measures. The intrinsic dimensionality of each data set is also estimated to determine whether projections in 2- and 3-dimensions can be expected to reveal meaningful relationships among trees from different data partitions. Several new approaches to aid in the comparison of different phylogenetic landscapes are presented. Curvilinear Components Analysis (CCA) and a stochastic gradient decent (SGD) optimization method give the best representation of the original tree-to-tree distance matrix for each of the three- mitochondrial genome alignments and greatly outperformed the method currently used to visualize tree landscapes. The CCA + SGD method converged at least as fast as previously applied methods for visualizing tree landscapes. We demonstrate for all three mtDNA alignments that 3D

Human decision error (HUMDEE) trees

International Nuclear Information System (INIS)

Ostrom, L.T.

1993-01-01

Graphical presentations of human actions in incident and accident sequences have been used for many years. However, for the most part, human decision making has been underrepresented in these trees. This paper presents a method of incorporating the human decision process into graphical presentations of incident/accident sequences. This presentation is in the form of logic trees. These trees are called Human Decision Error Trees or HUMDEE for short. The primary benefit of HUMDEE trees is that they graphically illustrate what else the individuals involved in the event could have done to prevent either the initiation or continuation of the event. HUMDEE trees also present the alternate paths available at the operator decision points in the incident/accident sequence. This is different from the Technique for Human Error Rate Prediction (THERP) event trees. There are many uses of these trees. They can be used for incident/accident investigations to show what other courses of actions were available and for training operators. The trees also have a consequence component so that not only the decision can be explored, also the consequence of that decision

Tree felling: a necessary evil

CERN Multimedia

CERN Bulletin

2013-01-01

CERN started a campaign of tree felling in 2010 for safety reasons, and it will continue this year in various parts of the Meyrin site. As in previous years, the trees cut down in 2013 will be recycled and some will be replaced.   Diseased tree that had to be cut down on the Meyrin site. In association with the Geneva nature and countryside directorate (Direction générale de la nature et du paysage, DGNP), CERN commissioned the Geneva school of landscaping, engineering and architecture (Haute école du paysage, d’ingénierie et d’architecture, HEPIA) to compile an inventory of the trees on the Meyrin site. In total, 1285 trees (excluding poplars) were recorded. 75.5% of these trees were declared to be in a good state of health (i.e. 971 trees), 21.5% in a moderate state of health (276 trees) and 3% in a poor state of health (38 trees). As for the poplars, the 236 specimens recorded on the Meyrin site were judged to be too old, to...

Per tree estimates with n-tree distance sampling: an application to increment core data

Science.gov (United States)

Thomas B. Lynch; Robert F. Wittwer

2002-01-01

Per tree estimates using the n trees nearest a point can be obtained by using a ratio of per unit area estimates from n-tree distance sampling. This ratio was used to estimate average age by d.b.h. classes for cottonwood trees (Populus deltoides Bartr. ex Marsh.) on the Cimarron National Grassland. Increment...

High macroalgal cover and low coral recruitment undermines the potential resilience of the world's southernmost coral reef assemblages

KAUST Repository

Hoey, Andrew; Pratchett, Morgan S.; Cvitanovic, Christopher

2011-01-01

Coral reefs are under increasing pressure from anthropogenic and climate-induced stressors. The ability of reefs to reassemble and regenerate after disturbances (i.e., resilience) is largely dependent on the capacity of herbivores to prevent macroalgal expansion, and the replenishment of coral populations through larval recruitment. Currently there is a paucity of this information for higher latitude, subtropical reefs. To assess the potential resilience of the benthic reef assemblages of Lord Howe Island (31°32?S, 159°04?E), the worlds' southernmost coral reef, we quantified the benthic composition, densities of juvenile corals (as a proxy for coral recruitment), and herbivorous fish communities. Despite some variation among habitats and sites, benthic communities were dominated by live scleractinian corals (mean cover 37.4%) and fleshy macroalgae (20.9%). Live coral cover was higher than in most other subtropical reefs and directly comparable to lower latitude tropical reefs. Juvenile coral densities (0.8 ind.m -2), however, were 5-200 times lower than those reported for tropical reefs. Overall, macroalgal cover was negatively related to the cover of live coral and the density of juvenile corals, but displayed no relationship with herbivorous fish biomass. The biomass of herbivorous fishes was relatively low (204 kg.ha -1), and in marked contrast to tropical reefs was dominated by macroalgal browsing species (84.1%) with relatively few grazing species. Despite their extremely low biomass, grazing fishes were positively related to both the density of juvenile corals and the cover of bare substrata, suggesting that they may enhance the recruitment of corals through the provision of suitable settlement sites. Although Lord Howe Islands' reefs are currently coral-dominated, the high macroalgal cover, coupled with limited coral recruitment and low coral growth rates suggest these reefs may be extremely susceptible to future disturbances. © 2011 Hoey et al.

High macroalgal cover and low coral recruitment undermines the potential resilience of the world's southernmost coral reef assemblages

KAUST Repository

Hoey, Andrew

2011-10-03

Coral reefs are under increasing pressure from anthropogenic and climate-induced stressors. The ability of reefs to reassemble and regenerate after disturbances (i.e., resilience) is largely dependent on the capacity of herbivores to prevent macroalgal expansion, and the replenishment of coral populations through larval recruitment. Currently there is a paucity of this information for higher latitude, subtropical reefs. To assess the potential resilience of the benthic reef assemblages of Lord Howe Island (31°32?S, 159°04?E), the worlds\\' southernmost coral reef, we quantified the benthic composition, densities of juvenile corals (as a proxy for coral recruitment), and herbivorous fish communities. Despite some variation among habitats and sites, benthic communities were dominated by live scleractinian corals (mean cover 37.4%) and fleshy macroalgae (20.9%). Live coral cover was higher than in most other subtropical reefs and directly comparable to lower latitude tropical reefs. Juvenile coral densities (0.8 ind.m -2), however, were 5-200 times lower than those reported for tropical reefs. Overall, macroalgal cover was negatively related to the cover of live coral and the density of juvenile corals, but displayed no relationship with herbivorous fish biomass. The biomass of herbivorous fishes was relatively low (204 kg.ha -1), and in marked contrast to tropical reefs was dominated by macroalgal browsing species (84.1%) with relatively few grazing species. Despite their extremely low biomass, grazing fishes were positively related to both the density of juvenile corals and the cover of bare substrata, suggesting that they may enhance the recruitment of corals through the provision of suitable settlement sites. Although Lord Howe Islands\\' reefs are currently coral-dominated, the high macroalgal cover, coupled with limited coral recruitment and low coral growth rates suggest these reefs may be extremely susceptible to future disturbances. © 2011 Hoey et al.

High macroalgal cover and low coral recruitment undermines the potential resilience of the world's southernmost coral reef assemblages.

Directory of Open Access Journals (Sweden)

Andrew S Hoey

Full Text Available Coral reefs are under increasing pressure from anthropogenic and climate-induced stressors. The ability of reefs to reassemble and regenerate after disturbances (i.e., resilience is largely dependent on the capacity of herbivores to prevent macroalgal expansion, and the replenishment of coral populations through larval recruitment. Currently there is a paucity of this information for higher latitude, subtropical reefs. To assess the potential resilience of the benthic reef assemblages of Lord Howe Island (31°32'S, 159°04'E, the worlds' southernmost coral reef, we quantified the benthic composition, densities of juvenile corals (as a proxy for coral recruitment, and herbivorous fish communities. Despite some variation among habitats and sites, benthic communities were dominated by live scleractinian corals (mean cover 37.4% and fleshy macroalgae (20.9%. Live coral cover was higher than in most other subtropical reefs and directly comparable to lower latitude tropical reefs. Juvenile coral densities (0.8 ind.m(-2, however, were 5-200 times lower than those reported for tropical reefs. Overall, macroalgal cover was negatively related to the cover of live coral and the density of juvenile corals, but displayed no relationship with herbivorous fish biomass. The biomass of herbivorous fishes was relatively low (204 kg.ha(-1, and in marked contrast to tropical reefs was dominated by macroalgal browsing species (84.1% with relatively few grazing species. Despite their extremely low biomass, grazing fishes were positively related to both the density of juvenile corals and the cover of bare substrata, suggesting that they may enhance the recruitment of corals through the provision of suitable settlement sites. Although Lord Howe Islands' reefs are currently coral-dominated, the high macroalgal cover, coupled with limited coral recruitment and low coral growth rates suggest these reefs may be extremely susceptible to future disturbances.

Returning from the Horizon: Introducing Urban Island Studies

Directory of Open Access Journals (Sweden)

Xavier Barceló Pinya

2015-12-01

Full Text Available Island studies tends to focus on peripheral, isolated, and marginal aspects of island communities, while urban studies has showed scant awareness of islandness: Although many people research cities on islands, there is little tradition of researching island cities or urban archipelagos per se. Island cities (densely populated small islands and population centres of larger islands and archipelagos nevertheless play import cultural, economic, political, and environmental roles on local, regional, and global scales. Many major cities and ports have developed on small islands, and even villages can fulfil important urban functions on lightly populated islands. Island concepts are also deployed to metaphorically describe developments in urban space. The journal Urban Island Studies explores island and urban processes around the world, taking an island approach to urban research and an urban approach to island research.

Barrier island facies models and recognition criteria

Science.gov (United States)

Mulhern, J.; Johnson, C. L.

2017-12-01

Barrier island outcrops record transgressive shoreline motion at geologic timescales, providing integral clues to understanding how coastlines respond to rising sea levels. However, barrier island deposits are difficult to recognize. While significant progress has been made in understanding the modern coastal morphodynamics, this insight is not fully leveraged in existing barrier island facies models. Excellent outcrop exposures of the paralic Upper Cretaceous Straight Cliffs Formation of southern Utah provide an opportunity to revise facies models and recognition criteria for barrier island deposits. Preserved barrier islands are composed of three main architectural elements (shorefaces, tidal inlets, and tidal channels) which occur independently or in combination to create larger-scale barrier island deposits. Barrier island shorefaces record progradation, while barrier island tidal inlets record lateral migration, and barrier island tidal channels record aggradation within the tidal inlet. Four facies associations are used to describe and characterize these barrier island architectural elements. Barrier islands occur in association with backarrier fill and internally contain lower and upper shoreface, high-energy upper shoreface, and tidal channel facies. Barrier islands bound lagoons or estuaries, and are distinguished from other shoreface deposits by their internal facies and geometry, association with backbarrier facies, and position within transgressive successions. Tidal processes, in particular tidal inlet migration and reworking of the upper shoreface, also distinguish barrier island deposits. Existing barrier island models highlight the short term heterogeneous and dynamic nature of barrier island systems, yet overlook processes tied to geologic time scales, such as multi-directional motion, erosion, and reworking, and their expressions in preserved barrier island strata. This study uses characteristic outcrop expressions of barrier island successions to

Interactive Tree Of Life v2: online annotation and display of phylogenetic trees made easy.

Science.gov (United States)

Letunic, Ivica; Bork, Peer

2011-07-01

Interactive Tree Of Life (http://itol.embl.de) is a web-based tool for the display, manipulation and annotation of phylogenetic trees. It is freely available and open to everyone. In addition to classical tree viewer functions, iTOL offers many novel ways of annotating trees with various additional data. Current version introduces numerous new features and greatly expands the number of supported data set types. Trees can be interactively manipulated and edited. A free personal account system is available, providing management and sharing of trees in user defined workspaces and projects. Export to various bitmap and vector graphics formats is supported. Batch access interface is available for programmatic access or inclusion of interactive trees into other web services.

Maximum Gene-Support Tree

Directory of Open Access Journals (Sweden)

Yunfeng Shan

2008-01-01

Full Text Available Genomes and genes diversify during evolution; however, it is unclear to what extent genes still retain the relationship among species. Model species for molecular phylogenetic studies include yeasts and viruses whose genomes were sequenced as well as plants that have the fossil-supported true phylogenetic trees available. In this study, we generated single gene trees of seven yeast species as well as single gene trees of nine baculovirus species using all the orthologous genes among the species compared. Homologous genes among seven known plants were used for validation of the finding. Four algorithms—maximum parsimony (MP, minimum evolution (ME, maximum likelihood (ML, and neighbor-joining (NJ—were used. Trees were reconstructed before and after weighting the DNA and protein sequence lengths among genes. Rarely a gene can always generate the “true tree” by all the four algorithms. However, the most frequent gene tree, termed “maximum gene-support tree” (MGS tree, or WMGS tree for the weighted one, in yeasts, baculoviruses, or plants was consistently found to be the “true tree” among the species. The results provide insights into the overall degree of divergence of orthologous genes of the genomes analyzed and suggest the following: 1 The true tree relationship among the species studied is still maintained by the largest group of orthologous genes; 2 There are usually more orthologous genes with higher similarities between genetically closer species than between genetically more distant ones; and 3 The maximum gene-support tree reflects the phylogenetic relationship among species in comparison.

Tree Rings: Timekeepers of the Past.

Science.gov (United States)

Phipps, R. L.; McGowan, J.

One of a series of general interest publications on science issues, this booklet describes the uses of tree rings in historical and biological recordkeeping. Separate sections cover the following topics: dating of tree rings, dating with tree rings, tree ring formation, tree ring identification, sample collections, tree ring cross dating, tree…

Flowering Trees

Indian Academy of Sciences (India)

Cassia siamia Lamk. (Siamese tree senna) of Caesalpiniaceae is a small or medium size handsome tree. Leaves are alternate, pinnately compound and glandular, upto 18 cm long with 8–12 pairs of leaflets. Inflorescence is axillary or terminal and branched. Flowering lasts for a long period from March to February. Fruit is ...

Flowering Trees

Indian Academy of Sciences (India)

Flowering Trees. Cerbera manghasL. (SEA MANGO) of Apocynaceae is a medium-sized evergreen coastal tree with milky latex. The bark is grey-brown, thick and ... Fruit is large. (5–10 cm long), oval containing two flattened seeds and resembles a mango, hence the name Mangas or. Manghas. Leaves and fruits contain ...

Talking Trees

Science.gov (United States)

Tolman, Marvin

2005-01-01

Students love outdoor activities and will love them even more when they build confidence in their tree identification and measurement skills. Through these activities, students will learn to identify the major characteristics of trees and discover how the pace--a nonstandard measuring unit--can be used to estimate not only distances but also the…

ELB-trees an efficient and lock-free B-tree derivative

DEFF Research Database (Denmark)

Bonnichsen, Lars Frydendal; Karlsson, Sven; Probst, Christian W.

2013-01-01

overhead. All lock-free data structures are based on simple atomic operations that, though supported by modern processors, are expensive in execution time. We present a lock-free data structure, ELB-trees, which under certain assumptions can be used as multimaps as well as priority queues. Specifically...... it cannot store duplicate key-value pairs, and it is not linearizable. Compared to existing data structures, ELB-trees require fewer atomic operations leading to improved performance. We measure the parallel performance of ELB-trees using a set of benchmarks and observe that ELB-trees are up to almost 30......As computer systems scale in the number of processors, scalable data structures with good parallel performance become increasingly important. Lock-free data structures promise such improved parallel performance at the expense of higher algorithmic complexity and higher sequential execution time...

A support vector machine based test for incongruence between sets of trees in tree space

Science.gov (United States)

2012-01-01

Background The increased use of multi-locus data sets for phylogenetic reconstruction has increased the need to determine whether a set of gene trees significantly deviate from the phylogenetic patterns of other genes. Such unusual gene trees may have been influenced by other evolutionary processes such as selection, gene duplication, or horizontal gene transfer. Results Motivated by this problem we propose a nonparametric goodness-of-fit test for two empirical distributions of gene trees, and we developed the software GeneOut to estimate a p-value for the test. Our approach maps trees into a multi-dimensional vector space and then applies support vector machines (SVMs) to measure the separation between two sets of pre-defined trees. We use a permutation test to assess the significance of the SVM separation. To demonstrate the performance of GeneOut, we applied it to the comparison of gene trees simulated within different species trees across a range of species tree depths. Applied directly to sets of simulated gene trees with large sample sizes, GeneOut was able to detect very small differences between two set of gene trees generated under different species trees. Our statistical test can also include tree reconstruction into its test framework through a variety of phylogenetic optimality criteria. When applied to DNA sequence data simulated from different sets of gene trees, results in the form of receiver operating characteristic (ROC) curves indicated that GeneOut performed well in the detection of differences between sets of trees with different distributions in a multi-dimensional space. Furthermore, it controlled false positive and false negative rates very well, indicating a high degree of accuracy. Conclusions The non-parametric nature of our statistical test provides fast and efficient analyses, and makes it an applicable test for any scenario where evolutionary or other factors can lead to trees with different multi-dimensional distributions. The

Gridded multibeam bathymetry of Howland Island, Pacific Remote Island Areas, Central Pacific

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Gridded bathymetry at 40m resolution surrounding Howland Island, within the Pacific Remote Island Areas - Central Pacific Ocean. Bottom coverage was achieved in...

Experimental Evaluation of PV Inverter Anti-Islanding with Grid Support Functions in Multi-Inverter Island Scenarios

Energy Technology Data Exchange (ETDEWEB)

Hoke, Anderson [National Renewable Energy Lab. (NREL), Golden, CO (United States); Nelson, Austin [National Renewable Energy Lab. (NREL), Golden, CO (United States); Miller, Brian [National Renewable Energy Lab. (NREL), Golden, CO (United States); Chakraborty, Sudipta [National Renewable Energy Lab. (NREL), Golden, CO (United States); Bell, Frances [SolarCity, San Mateo, CA (United States); McCarty, Michael [SolarCity, San Mateo, CA (United States)

2016-07-01

As PV and other DER systems are connected to the grid at increased penetration levels, island detection may become more challenging for two reasons: 1.) In islands containing many DERs, active inverter-based anti-islanding methods may have more difficulty detecting islands because each individual inverter's efforts to detect the island may be interfered with by the other inverters in the island. 2.) The increasing numbers of DERs are leading to new requirements that DERs ride through grid disturbances and even actively try to regulate grid voltage and frequency back towards nominal operating conditions. These new grid support requirements may directly or indirectly interfere with anti-islanding controls. This report describes a series of tests designed to examine the impacts of both grid support functions and multi-inverter islands on anti-islanding effectiveness. Crucially, the multi-inverter anti-islanding tests described in this report examine scenarios with multiple inverters connected to multiple different points on the grid. While this so-called 'solar subdivision' scenario has been examined to some extent through simulation, this is the first known work to test it using hardware inverters. This was accomplished through the use of power hardware-in-the-loop (PHIL) simulation, which allows the hardware inverters to be connected to a real-time transient simulation of an electric power system that can be easily reconfigured to test various distribution circuit scenarios. The anti-islanding test design was a modified version of the unintentional islanding test in IEEE Standard 1547.1, which creates a balanced, resonant island with the intent of creating a highly challenging condition for island detection. Three common, commercially available single-phase PV inverters from three different manufacturers were tested. The first part of this work examined each inverter individually using a series of pure hardware resistive-inductive-capacitive (RLC