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Sample records for high amylose content

  1. Resistant starch: Variation among high amylose rice varieties and its relationship with apparent amylose content, pasting properties and cooking methods.

    Science.gov (United States)

    Chen, Ming-Hsuan; Bergman, Christine J; McClung, Anna M; Everette, Jace D; Tabien, Rodante E

    2017-11-01

    Resistant starch (RS), which is not hydrolyzed in the small intestine, has proposed health benefits. We evaluated 40 high amylose rice varieties for RS content in cooked rice and a 1.9-fold difference was found. Some varieties had more than two-fold greater RS content than a US long-grain intermediate-amylose rice. The high amylose varieties were grouped into four classes according to paste viscosity and gelatinization temperature based on genetic variants of the Waxy and Starch Synthase IIa genes, respectively. RS content was not different between the four paste viscosity-gelatinization temperature classes. Multiple linear regression analysis showed that apparent amylose content and pasting temperature were strong predictors of RS within each class. Two cooking methods, fixed water-to-rice ratio/time and in excess-water/minimum-cook-time, were compared using six rice varieties that were extremes in RS in each of the genetic variant classes, no difference in RS content due to cooking method was observed. Published by Elsevier Ltd.

  2. Amylose content of rice marketed in Portugal

    OpenAIRE

    2014-01-01

    Amylose content is considered to be the most important parameter of cooking quality in rice. Presently, rice cultivars are categorized according to amylose content into three groups: low, medium and high amylose content cultivars. The specific objective of this work is to evaluate the grain amylose content of 77 cultivars, which cover Índica and Japónica subspecies, and different types of commercial rice like, aromatic (basmati and thay), wild rice, medium rice (carlose and risotto), glutinou...

  3. Retrogradation of Maize Starch after High Hydrostatic Pressure Gelation: Effect of Amylose Content and Depressurization Rate

    KAUST Repository

    Yang, Zhi

    2016-05-24

    High hydrostatic pressure (HHP) has been employed to gelatinize or physically modify starch dispersions. In this study, waxy maize starch, normal maize starch, and two high amylose content starch were processed by a HHP of the order of 600 MPa, at 25°C for 15min. The effect of HHP processing on the crystallization of maize starches with various amylose content during storage at 4°C was investigated. Crystallization kinetics of HHP treated starch gels were investigated using rheology and FTIR. The effect of crystallization on the mechanical properties of starch gel network were evaluated in terms of dynamic complex modulus (G*). The crystallization induced increase of short-range helices structures were investigated using FTIR. The pressure releasing rate does not affect the starch retrogradation behaviour. The rate and extent of retrogradation depends on the amylose content of amylose starch. The least retrogradation was observed in HHP treated waxy maize starch. The rate of retrogradation is higher for HHP treated high amylose maize starch than that of normal maize starch. A linear relationship between the extent of retrogradation (phase distribution) measured by FTIR and G* is proposed.

  4. Retrogradation of Maize Starch after High Hydrostatic Pressure Gelation: Effect of Amylose Content and Depressurization Rate.

    Science.gov (United States)

    Yang, Zhi; Swedlund, Peter; Gu, Qinfen; Hemar, Yacine; Chaieb, Sahraoui

    2016-01-01

    High hydrostatic pressure (HHP) has been employed to gelatinize or physically modify starch dispersions. In this study, waxy maize starch, normal maize starch, and two high amylose content starch were processed by a HHP of the order of 600 MPa, at 25°C for 15min. The effect of HHP processing on the crystallization of maize starches with various amylose content during storage at 4°C was investigated. Crystallization kinetics of HHP treated starch gels were investigated using rheology and FTIR. The effect of crystallization on the mechanical properties of starch gel network were evaluated in terms of dynamic complex modulus (G*). The crystallization induced increase of short-range helices structures were investigated using FTIR. The pressure releasing rate does not affect the starch retrogradation behaviour. The rate and extent of retrogradation depends on the amylose content of amylose starch. The least retrogradation was observed in HHP treated waxy maize starch. The rate of retrogradation is higher for HHP treated high amylose maize starch than that of normal maize starch. A linear relationship between the extent of retrogradation (phase distribution) measured by FTIR and G* is proposed.

  5. Retrogradation of Maize Starch after High Hydrostatic Pressure Gelation: Effect of Amylose Content and Depressurization Rate.

    Directory of Open Access Journals (Sweden)

    Zhi Yang

    Full Text Available High hydrostatic pressure (HHP has been employed to gelatinize or physically modify starch dispersions. In this study, waxy maize starch, normal maize starch, and two high amylose content starch were processed by a HHP of the order of 600 MPa, at 25°C for 15min. The effect of HHP processing on the crystallization of maize starches with various amylose content during storage at 4°C was investigated. Crystallization kinetics of HHP treated starch gels were investigated using rheology and FTIR. The effect of crystallization on the mechanical properties of starch gel network were evaluated in terms of dynamic complex modulus (G*. The crystallization induced increase of short-range helices structures were investigated using FTIR. The pressure releasing rate does not affect the starch retrogradation behaviour. The rate and extent of retrogradation depends on the amylose content of amylose starch. The least retrogradation was observed in HHP treated waxy maize starch. The rate of retrogradation is higher for HHP treated high amylose maize starch than that of normal maize starch. A linear relationship between the extent of retrogradation (phase distribution measured by FTIR and G* is proposed.

  6. Amylose Content in Tuber Starch of Wild Potato Species

    Science.gov (United States)

    Approximately 20% of potato tuber fresh weight is starch, which is composed of amylose (straight chains of glucose) and amylopectin (branched chains). Potato starch is low in amylose (~25%), but high amylose starch has superior nutritional qualities. Amylose content has been determined in tuber samp...

  7. Studies of Amylose Content in Potato Starch

    Science.gov (United States)

    Potato starch is typically low in amylose (~20-25%), but high amylose starch has superior nutritional qualities. The ratio between amylose and amylopectin is the most important property influencing the physical properties of starch. There is a strong case to be made for the development of food crops...

  8. Amylose content decreases during tuber development in potato.

    Science.gov (United States)

    Jansky, Shelley; Fajardo, Diego

    2016-10-01

    Potato starch is composed primarily of amylopectin and amylose in an approximately 3:1 ratio. Amylose is considered to be nutritionally desirable in North American and European markets, so there is interest in finding strategies to increase the amylose content of potato starch. There is also interest in marketing 'baby' potatoes, which are harvested when they are physiologically immature. This study was carried out to determine weekly changes in amylose content in potato tubers of 11 North American cultivars during the growing season. The trial was repeated across 3 years. We determined that amylose content is highest early and it decreases in a linear fashion as the growing season progresses. Mean amylose content across cultivars and years declined from 30.0% in late June to 26.8% in late August. The rate of decrease varied across years, with slopes of linear regression plots ranging from -0.17 in 2012 to -0.74 in 2011. Amylose content in tuber starch varied among cultivars, with the highest levels observed in Ranger Russet (30.7%) and White Pearl (31.6%); it was lowest in Kennebec (25.7%) and Langlade (25.6%). This study adds to a growing body of literature on the nutritional value of immature potato tubers. In addition to having higher levels of some phytonutrients, as reported in other studies, immature tubers have a higher proportion of amylose in the starch. This is nutritionally desirable in affluent regions where high fiber content is more important than calories from carbohydrates. Published 2016. This article is a U.S. Government work and is in the public domain in the USA. Published 2016. This article is a U.S. Government work and is in the public domain in the USA.

  9. Development of high amylose wheat through TILLING

    National Research Council Canada - National Science Library

    Slade, Ann J; McGuire, Cate; Loeffler, Dayna; Mullenberg, Jessica; Skinner, Wayne; Fazio, Gia; Holm, Aaron; Brandt, Kali M; Steine, Michael N; Goodstal, John F; Knauf, Vic C

    2012-01-01

    .... Starches with increased levels of amylose are of interest because of the correlation between higher amylose content and elevated levels of resistant starch, which has been shown to have beneficial...

  10. Microstructure changes of on the extruded high-amylose bionanocomposites as affected by moisture content via synchrotron radiation studies

    Science.gov (United States)

    Liu, Huihua; Chaudhary, Deeptangshu

    2014-08-01

    The crystalline domain changes and lamellar structure observations of sorbitol-plasticized starch nanocomposite had been investigated via synchrotron. Strong interactions were found between amylose-sorbitol, resulting in reduced inter-helix spacing of the starch polymer. Achievable dspacing of nanoclay was confirmed to be correlated to the moisture content (mc) within the nanocomposites. SAXS diffraction patterns changed from circular (high mc samples) to elliptical (low mc samples), indicating the formation of long periodic structure and increased heterogeneities of the electron density within the samples. Two different domains sized at around 90 Å and 350 Å were found for the low mc samples. However, only the ~90 Å domain was observed in high mc samples. Formation of the 380 Å domain is attributed to the retrogradation behaviour in the absence of water molecules. Meanwhile, the nucleation effect of nanoclay is another factor leading to the emergence of the larger crystalline domain.

  11. Amylose content decreases during tuber development in potato

    Science.gov (United States)

    Potato starch is composed of amylopectin and amylose in an approximately three to one ratio. Amylose is considered to be nutritionally desirable, so there is interest in finding strategies to increase the amylose content of potatoes. There is also interest in marketing “baby” potatoes, which are har...

  12. Progresses in Researches of the Application of Low-Amylose Content Rice Gene for Breeding

    Institute of Scientific and Technical Information of China (English)

    ZHU Chang-lan; SHEN Wen-biao; ZHAI Hu-qu; WAN Jian-min

    2004-01-01

    Amylose content is a key determinant of eating quality of rice. With the characteristics of fluffy texture, glossy appearance when cooked, remaining soft when cooled and excellent puffing ability, the low-amylose rice with amylose content 5-15% could be served as not only cooked rice directly, but also good material for convenience, mixed rice and puffing foods.Current status on characterization, inheritance, molecular mechanism and breeding of lowamylose content rice was reviewed in this paper, strategy of related researches in the era of glymics was mainly discussed furthermore. The future research should focus on screening and enhancing the germplasm, further elucidating the molecular mechanism on mutation of low amylose content, utilizing the genes independent of Wx on low-amylose content rice breeding program, and developing high quality functional rice cultivars for special usage through pyramiding low amylose gene and other special quality genes.

  13. Effect of high temperature on grain filling period, yield, amylose content and activity of starch biosynthesis enzymes in endosperm of basmati rice.

    Science.gov (United States)

    Ahmed, Nisar; Tetlow, Ian J; Nawaz, Sehar; Iqbal, Ahsan; Mubin, Muhammad; Nawaz ul Rehman, Muhammad Shah; Butt, Aisha; Lightfoot, David A; Maekawa, Masahiko

    2015-08-30

    High temperature during grain filling affects yield, starch amylose content and activity of starch biosynthesis enzymes in basmati rice. To investigate the physiological mechanisms underpinning the effects of high temperature on rice grain, basmati rice was grown under two temperature conditions - 32 and 22 °C - during grain filling. High temperature decreased the grain filling period from 32 to 26 days, reducing yield by 6%, and caused a reduction in total starch (3.1%) and amylose content (22%). Measurable activities of key enzymes involved in sucrose to starch conversion, sucrose synthase, ADP-glucose pyrophosphorylase, starch phosphorylase and soluble starch synthase in endosperms developed at 32 °C were lower than those at 22 °C compared with similar ripening stage on an endosperm basis. In particular, granule-bound starch synthase (GBSS) activity was significantly lower than corresponding activity in endosperms developing at 22 °C during all developmental stages analyzed. Results suggest changes in amylose/amylopectin ratio observed in plants grown at 32 °C was attributable to a reduction in activity of GBSS, the sole enzyme responsible for amylose biosynthesis. © 2014 Society of Chemical Industry.

  14. Starch with high amylose content and low in vitro digestibility increases intestinal nutrient flow and microbial fermentation and selectively promotes bifidobacteria in pigs.

    Science.gov (United States)

    Regmi, Prajwal R; Metzler-Zebeli, Barbara U; Gänzle, Michael G; van Kempen, Theo A T G; Zijlstra, Ruurd T

    2011-07-01

    Diets containing different starch types can affect enzymatic digestion of starch and thereby starch availability for microbial fermentation in the gut. However, the role of starch chemistry in nutrient digestion and flow and microbial profile has been poorly explained. Eight ileal-cannulated pigs (29.4 ± 0.9 kg body weight) were fed 4 diets containing 70% purified starch (amylose content, starch output, postileal crude protein yield, fecal total SCFA and total butyrate content, and gene copies of Bifidobacterium spp. in feces were higher (P starch diet than the remaining 3 starch diets. The in vitro starch digestion rate had a negative, nonlinear relationship with ileal starch flow (R(2) = 0.98; P starch flow was positively related to Bifidobacterium spp. (R(2) = 0.27; P starch with high amylose content and low in vitro digestibility increased postileal nutrient flow and microbial fermentation and selectively promoted Bifidobacterium spp. in the distal gut.

  15. A comparative study of annealing of waxy, normal and high-amylose maize starches: the role of amylose molecules.

    Science.gov (United States)

    Wang, Shujun; Wang, Jinrong; Yu, Jinglin; Wang, Shuo

    2014-12-01

    The effect of annealing on starch structure and functionality of three maize starches (waxy, normal and high-amylose) was investigated, with the aim of understanding the role of amylose molecules during starch annealing. Amylose content, granular morphology and crystallinity of maize starches were little affected by annealing treatment. Annealing treatment did not alter the swelling power of waxy maize starch, but reduced the swelling power of normal and high-amylose maize starches. The thermal transition temperatures were increased, and the temperature range was decreased, but the enthalpy change was not affected greatly. The pasting viscosities of normal and waxy maize starches were decreased significantly, with the pasting temperature being little affected. The in vitro digestibility of three maize starches was not affected significantly by annealing treatment. Our results demonstrated that amylose molecules play an important role in the structural reorganization of starch granules during annealing treatment. Copyright © 2014 Elsevier Ltd. All rights reserved.

  16. Interaction between amylose and tea polyphenols modulates the postprandial glycemic response to high-amylose maize starch.

    Science.gov (United States)

    Chai, Yanwei; Wang, Mingzhu; Zhang, Genyi

    2013-09-11

    High-amylose maize starch (HAM) is a common source material to make resistant starch with its high content of amylose (>70%). In the current investigation, the self-assembly of amylose in the presence of bioactive tea polyphenols (TPLs) and resulting slow digestion property of starch were explored. The experimental results using a mouse model showed a slow digestion property can be achieved with an extended and moderate glycemic response to HAM starch cocooked with TPLs. Further studies using a dilute aqueous amylose solution (0.1%, w/v) revealed an increased hydrodynamic radius of amylose molecules, indicating that TPLs could bridge them together, leading to increased molecular sizes. On the other hand, the bound TPLs interrupted the normal process of amylose recrystallizaiton evidenced by a decreased viscosity and storage modulus (G') of HAM (5%) gel, a rough surface of the cross-section of HAM film, and decreased short-range orders examined by Fourier transform infrared spectral analysis. Single-step degradation curves in the thermal gravimetric profile demonstrated the existence of a self-assembled amylose-TPL complex, which is mainly formed through hydrogen bonding interaction according to the results of iodine binding and X-ray powder diffraction analysis. Collectively, the amylose-TPL complexation influences the normal self-assembling process of amylose, leading to a low-ordered crystalline structure, which is the basis for TPLs' function in modulating the digestion property of HAM starch to produce a slowly digestible starch material that is beneficial to postprandial glycemic control and related health effects.

  17. Genetic controls on starch amylose content in wheat and rice grains

    Indian Academy of Sciences (India)

    Parviz Fasahat; Sadequr Rahman; Wickneswari Ratnam

    2014-04-01

    Starch accumulates in plants as granules in chloroplasts of source organs such as leaves (transitory starch) or in amyloplasts of sink organs such as seeds, tubers and roots (storage starch). Starch is composed of two types of glucose polymers: the essentially linear polymer amylose and highly branched amylopectin. The amylose content of wheat and rice seeds is an important quality trait, affecting the nutritional and sensory quality of two of the world’s most important crops. In this review, we focus on the relationship between amylose biosynthesis and the structure, physical behaviour and functionality of wheat and rice grains. We briefly describe the structure and composition of starch and then in more detail describe what is known about the mechanism of amylose synthesis and how the amount of amylose in starch might be controlled. This more specifically includes analysis of GBSS alleles, the relationship between waxy allelic forms and amylose, and related quantitative trait loci. Finally, different methods for increasing or lowering amylose content are evaluated.

  18. Breeding for improved potato nutrition: High amylose starch potatoes show promise as fiber source

    Science.gov (United States)

    Potato starch is composed of approximately 75% amylopectin and 25% amylose. We are interested in breeding for higher amylose content, which would increase the fiber content of potato and decrease glycemic index. In order to make progress in a breeding program, we have developed a high throughput ass...

  19. Impact of full range of amylose contents on the architecture of starch granules.

    Science.gov (United States)

    Goldstein, Avi; Annor, George; Putaux, Jean-Luc; Hebelstrup, Kim H; Blennow, Andreas; Bertoft, Eric

    2016-08-01

    The effects of amylose deposition on crystalline regions of barley starch granules were studied in granules containing zero to 99.1% amylose using "waxy" (WBS, 0% amylose), normal (NBS, 18% amylose) and amylose-only barley lines (AOS, 99.1% amylose). The effects were probed after hydrolysis of amorphous regions of starch granules in dilute HCl generating lintners, which typically represent the crystalline lamella of starch granules. Compared to NBS and WBS, AOS granules exhibited an irregular, multilobular morphology with a rough surface texture. AOS displayed lower rates of acid hydrolysis than WBS, and AOS reached a plateau at ∼45wt% acid hydrolysis. High-performance anion-exchange chromatography of lintners at equivalent levels of hydrolysis (45wt%) revealed the average degree of polymerization (DP) of AOS lintners was 21, substantially smaller than that of NBS and WBS (DP 42). AOS lintners contained the lowest number of chains (NC) per molecule (1.1) compared to NBS (2.8) and WBS (3.3) and the average chain length of AOS, NBS and WBS lintners was 19, 15 and 13, respectively. Hence, both NC and the average chain length correlated with amylose content. The size distribution profile of AOS lintners revealed a repeat motif in the molecules corresponding to 5-6 glucose residues.

  20. Characterization of the endosperm starch and the pleiotropic effects of biosynthetic enzymes on their properties in novel mutant rice lines with high resistant starch and amylose content.

    Science.gov (United States)

    Itoh, Yuuki; Crofts, Naoko; Abe, Misato; Hosaka, Yuko; Fujita, Naoko

    2017-05-01

    Resistant starch (RS) is beneficial to human health. In order to reduce the current prevalence of diabetes and obesity, several transgenic and mutant crops containing high RS content are being developed. RS content of steamed rice with starch-branching enzyme (BE)IIb-deficient mutant endosperms is considerably high. To understand the mechanisms of RS synthesis and to increase RS content, we developed novel mutant rice lines by introducing the gene encoding starch synthase (SS)IIa and/or granule-bound starch synthase (GBSS)I from an indica rice cultivar into a japonica rice-based BEIIb-deficient mutant line, be2b. Introduction of SSIIa from an indica rice cultivar produced higher levels of amylopectin chains with degree of polymerization (DP) 11-18 than those in be2b; the extent of the change was slight due to the shortage of donor chains for SSIIa (DP 6-12) owing to BEIIb deficiency. The introduction of GBSSI from an indica rice cultivar significantly increased amylose content (by approximately 10%) in the endosperm starch. RS content of the new mutant lines was the same as or slightly higher than that of the be2b parent line. The relationship linking starch structure, RS content, and starch biosynthetic enzymes in the new mutant lines has also been discussed. Copyright © 2017 Elsevier B.V. All rights reserved.

  1. Extruded foams prepared from high amylose starch with sodium stearate to form amylose inclusion complexes

    Science.gov (United States)

    Starch foams were prepared from high amylose corn starch in the presence and absence of sodium stearate and PVOH to determine how the formation of amylose-sodium stearate inclusion complexes and the addition of PVOH would affect foam properties. Low extrusion temperatures were used, and X-ray diffra...

  2. Influence of botanic origin and amylose content on the morphology of starch nanocrystals

    Science.gov (United States)

    LeCorre, Déborah; Bras, Julien; Dufresne, Alain

    2011-12-01

    Starch nanocrystals (SNC) are crystalline platelets resulting from the disruption of the semi-crystalline structure of starch granules by the acid hydrolysis of amorphous parts. The aim of this study was to assess the influence of botanic origin and amylose content of native starches on the morphology and properties of resulting nanoparticles. SNC were prepared from five different starches normal maize, high amylose maize, waxy maize, potato, and wheat; covering three botanic origins, two crystalline types, and three range of amylose content (0, 25, and 70%) for maize starch. Different types of nanocrystals were obtained with a thickness ranging between 4 and 8 nm and diameter from about 50 to 120 nm depending on the source. The comparison of their morphology, crystallinity, and rheological properties is proposed for the first time. For the same amylose content, maize, potato, and wheat resulted in rather similar size and crystallinity of SNC proving the limited influence of the botanic origin. For the same botanic origin (maize), differences in size were more important indicating the influence of the amylopectin content. Also, particles tended to show square shapes with increasing native starch's amylopectin content and A-type crystalinity. Thus, only high amylose content starches should be avoided to prepare SNC.

  3. Effect of cultivar, location and year on total starch, amylose, phosphorus content and starch grain size of high starch potato cultivars for food and industrial processing.

    Science.gov (United States)

    Šimková, Dagmar; Lachman, Jaromír; Hamouz, Karel; Vokál, Bohumil

    2013-12-15

    In recent time the interest of industry increases particularly in processing and use of potato high amylopectin (AMP) starches. Therefore the plant breeders effort to obtain "waxy" potato cultivars with low amylose (AMS) content. In this four-year study sixteen potato cultivars grown on five experimental locations were evaluated on the percentage of AMS/AMP by enzymatic method, starch content by the underwater weight method, phosphorus (P) content in starch digests spectrophotometrically, and starch granule size determined by laser diffraction method. Between enzymatic and iodine-potassium iodide method good correlation has been revealed (r=0.71). The correlation analysis between AMS and P levels showed a clear negative correlation. For all measured parameters (starch, AMS, P, starch granule size) significant impact of cultivar has been determined. Location and year have lower, but significant impact. No statistically significant effect of year on AMS has been found. The cultivar Amado distinguished with the highest AMP and P contents and the cultivar Westamyl showed all positive values interesting for growers and processors.

  4. Different structures of heterogeneous starch granules from high-amylose rice.

    Science.gov (United States)

    Man, Jianmin; Lin, Lingshang; Wang, Zhifeng; Wang, Youping; Liu, Qiaoquan; Wei, Cunxu

    2014-11-19

    High-amylose cereal starches usually have heterogeneous starch granules in morphological structure. In the present study, the polygonal, aggregate, elongated, and hollow starch granules were separated from different regions of the kernels of high-amylose rice, and their structures were investigated. The results showed that the polygonal starch granules had low amylose content and high short branch-chain and branching degree of amylopectin, and exhibited A-type crystallinity. The aggregate starch granules had high long branch-chain of amylopectin, relative crystallinity, and double helix content, and exhibited C-type crystallinity. The elongated starch granules had high amylose content and low branching degree of amylopectin and relative crystallinity, and exhibited C-type crystallinity. The hollow starch granules had very high amylose content, proportion of amorphous conformation, and amylose-lipid complex, and very low branch-chain of amylopectin, branching degree of amylopectin, and double helix content, and exhibited no crystallinity. The different structures of heterogeneous starch granules from high-amylose rice resulted in significantly different thermal properties.

  5. Dosage effect of high-amylose modifier gene(s) on the starch structure of maize amylose-extender mutant.

    Science.gov (United States)

    Jiang, Hongxin; Campbell, Mark; Wu, Yusheng; Du, Shuangkui; Srichuwong, Sathaporn; Jane, Jay-Lin

    2015-01-21

    The objective of this study was to investigate how dosages of high-amylose modifier (HAM) gene(s) affected the structure of maize amylose extender (ae) mutant starch. GEMS-0067 (G), a homozygous mutant of ae and the HAM gene(s), and H99ae (H), an ae single mutant, were self-pollinated or inter-crossed to produce maize endosperms of G/G, G/H, H/G, and H/H with 3, 2, 1, and 0 doses of HAM gene(s), respectively. Endosperm starch was fractionated into amylopectin, amylose, and intermediate component (IC) of large and small molecular weights using 1-butanol precipitation of amylose followed by gel-permeation chromatography. Increases in the dosage of HAM gene(s) from 0 to 3 decreased the amylopectin content. The HAM-gene dosage significantly changed the branch chain-length of small-molecular-weight IC, but had little effect on the branch chain-length distributions of amylopectin and large-molecular-weight IC and the molecular structure of amylose.

  6. Amylose Content and Grain Length of New Rice Transgressive Variants Derived from a Cross Between O. rufipogon and Malaysian Rice Cultivar MR219

    Directory of Open Access Journals (Sweden)

    Parviz Fasahat

    2012-01-01

    Full Text Available Amylose content is one of the important grain quality properties of rice. A total of 10 new rice genotypes (BC2F7 generation derived from a cross between O. rufipogon Griff. accession IRGC105491 and O. sativa subspecies indica cv. MR219 with high yield were evaluated for amylose content in three environments in Peninsular Malaysia. One of the parents, a popular high yielding Malaysian rice cultivar MR219 was used as a check. Based on the average amylose content across the environments, the genotype G13 showed significantly (p < 0.05 different amylose content (23.88 % in comparison to other genotypes. Two genotypes G13 (25.7% and G15 (25.6% were higher than MR219 (25.1% in terms of amylose content in Sungai Besar environment. There was a positive (r2=0.018 but no significant correlation between amylose content and grain length.

  7. Increasing the amylose content of durum wheat through silencing of the SBEIIa genes

    Directory of Open Access Journals (Sweden)

    Masci Stefania

    2010-07-01

    Full Text Available Abstract Background High amylose starch has attracted particular interest because of its correlation with the amount of Resistant Starch (RS in food. RS plays a role similar to fibre with beneficial effects for human health, providing protection from several diseases such as colon cancer, diabetes, obesity, osteoporosis and cardiovascular diseases. Amylose content can be modified by a targeted manipulation of the starch biosynthetic pathway. In particular, the inactivation of the enzymes involved in amylopectin synthesis can lead to the increase of amylose content. In this work, genes encoding starch branching enzymes of class II (SBEIIa were silenced using the RNA interference (RNAi technique in two cultivars of durum wheat, using two different methods of transformation (biolistic and Agrobacterium. Expression of RNAi transcripts was targeted to the seed endosperm using a tissue-specific promoter. Results Amylose content was markedly increased in the durum wheat transgenic lines exhibiting SBEIIa gene silencing. Moreover the starch granules in these lines were deformed, possessing an irregular and deflated shape and being smaller than those present in the untransformed controls. Two novel granule bound proteins, identified by SDS-PAGE in SBEIIa RNAi lines, were investigated by mass spectrometry and shown to have strong homologies to the waxy proteins. RVA analysis showed new pasting properties associated with high amylose lines in comparison with untransformed controls. Finally, pleiotropic effects on other starch genes were found by semi-quantitative and Real-Time reverse transcription-polymerase chain reaction (RT-PCR. Conclusion We have found that the silencing of SBEIIa genes in durum wheat causes obvious alterations in granule morphology and starch composition, leading to high amylose wheat. Results obtained with two different methods of transformation and in two durum wheat cultivars were comparable.

  8. Different structural properties of high-amylose maize starch fractions varying in granule size.

    Science.gov (United States)

    Cai, Canhui; Lin, Lingshang; Man, Jianmin; Zhao, Lingxiao; Wang, Zhifeng; Wei, Cunxu

    2014-12-03

    Large-, medium-, and small-sized granules were separated from normal and high-amylose maize starches using a glycerol centrifugation method. The different-sized fractions of normal maize starch showed similar molecular weight distribution, crystal structure, long- and short-range ordered structure, and lamellar structure of starch, but the different-sized fractions of high-amylose maize starch showed markedly different structural properties. The amylose content, iodine blue value, amylopectin long branch-chain, and IR ratio of 1045/1022 cm(-1) significantly increased with decrease of granule size, but the amylopectin short branch-chain and branching degree, relative crystallinity, IR ratio of 1022/995 cm(-1), and peak intensity of lamellar structure markedly decreased with decrease of granule size for high-amylose maize starch. The large-sized granules of high-amylose maize starch were A-type crystallinity, native and medium-sized granules of high-amylose maize starch were CA-type crystallinity, and small-sized granules of high-amylose maize starch were C-type crystallinity, indicating that C-type starch might contain A-type starch granules.

  9. Induced mutations in the starch branching enzyme II (SBEII) genes increase amylose and resistant starch content in durum wheat.

    Science.gov (United States)

    Hazard, Brittany; Zhang, Xiaoqin; Colasuonno, Pasqualina; Uauy, Cristobal; Beckles, Diane M; Dubcovsky, Jorge

    2012-01-01

    Starch is the largest component of the wheat (Triticum aestivum L.) grain and consists of approximately 70-80% amylopectin and 20-30% amylose. Amylopectin is a highly-branched, readily digested polysaccharide, whereas amylose has few branches and forms complexes that resist digestion and mimic dietary fiber (resistant starch). Down-regulation of the starch branching enzyme II (SBEII) gene by RNA interference (RNAi) was previously shown to increase amylose content in both hexaploid and tetraploid wheat. We generated ethyl methane sulphonate (EMS) mutants for the SBEIIa-A and SBEIIa-B homoeologs in the tetraploid durum wheat variety Kronos (T. turgidum ssp. durum L.). Single-gene mutants showed non-significant increases in amylose and resistant starch content, but a double mutant combining a SBEIIa-A knock-out mutation with a SBEIIa-B splice-site mutation showed a 22% increase in amylose content (P<0.0001) and a 115% increase in resistant starch content (P<0.0001). In addition, we obtained mutants for the A and B genome copies of the paralogous SBEIIb gene, mapped them 1-2 cM from SBEIIa, and generated double SBEIIa-SBEIIb mutants to study the effect of the SBEIIb gene in the absence of SBEIIa. These mutants are available to those interested in increasing amylose content and resistant starch in durum wheat.

  10. Effect of glycerol monostearate on the gelatinization behavior of maize starches with different amylose contents

    OpenAIRE

    2015-01-01

    The effect of different concentrations (1, 2, and 3%w/w) of glycerol monostearate (GMS) on gelatinization behavior of normal maize starch (NMS), waxy maize starch (WMS), and high amylose maize starch (HAMS) was evaluated. Leaching of amylose and solubility decreased in all starches with added GMS. Gelatinization temperatures increased in NMS but there was no change in WMS. During first heating in DSC, only NMS with added GMS displayed the dissociation peak of amylose-lipid complex. In cooling...

  11. Structural properties of hydrolyzed high-amylose rice starch by α-amylase from Bacillus licheniformis.

    Science.gov (United States)

    Qin, Fengling; Man, Jianmin; Xu, Bin; Hu, Maozhi; Gu, Minghong; Liu, Qiaoquan; Wei, Cunxu

    2011-12-14

    High-amylose cereal starch has a great benefit on human health through its resistant starch (RS) content. Enzyme hydrolysis of native starch is very helpful in understanding the structure of starch granules and utilizing them. In this paper, native starch granules were isolated from a transgenic rice line (TRS) enriched with amylose and RS and hydrolyzed by α-amylase. Structural properties of hydrolyzed TRS starches were studied by X-ray powder diffraction, Fourier transform infrared, and differential scanning calorimetry. The A-type polymorph of TRS C-type starch was hydrolyzed faster than the B-type polymorph, but the crystallinity did not significantly change during enzyme hydrolysis. The degree of order in the external region of starch granule increased with increasing enzyme hydrolysis time. The amylose content decreased at first and then went back up during enzyme hydrolysis. The hydrolyzed starches exhibited increased onset and peak gelatinization temperatures and decreased gelatinization enthalpy on hydrolysis. These results suggested that the B-type polymorph and high amylose that formed the double helices and amylose-lipid complex increased the resistance to BAA hydrolysis. Furthermore, the spectrum results of RS from TRS native starch digested by pancreatic α-amylase and amyloglucosidase also supported the above conclusion.

  12. Effect of defatting on acid hydrolysis rate of maize starch with different amylose contents.

    Science.gov (United States)

    Wei, Benxi; Hu, Xiuting; Zhang, Bao; Li, Hongyan; Xu, Xueming; Jin, Zhengyu; Tian, Yaoqi

    2013-11-01

    The effect of defatting on the physiochemical properties and the acid hydrolysis rate of maize starch with different amylose contents was evaluated in this study. The increase in the number of pores and the stripping of starch surface layers were observed after defatting by scanning electron microscopy. X-ray diffraction spectrum showed that the peaks attributing to the amylose-lipid complex disappeared. The relative crystallinity increased by 19% for high-amylose maize starch (HMS) on defatting, while the other tested starches virtually unchanged. Differential scanning calorimetry study indicated an increase in the thermal stability for the defatted starches. Compared with native waxy maize starch, the acid hydrolysis rate of the defatted one increased by 6% after 10 days. For normal maize starch (NMS) and HMS, the higher rate of hydrolysis was observed during the first 5 days. Thereafter, the hydrolysis rate was lower than that of their native counterpart. The increase in susceptibility to acid hydrolysis (in the first 5 days) was mainly attributed to the defective and porous structures formed during defatting process, while the decrease of hydrolysis rate for NMS and HMS samples (after the first 5 days) probably resulted from the increase in the relative crystallinity.

  13. Ordered structure and thermal property of acid-modified high-amylose rice starch.

    Science.gov (United States)

    Man, Jianmin; Qin, Fengling; Zhu, Lijia; Shi, Yong-Cheng; Gu, Minghong; Liu, Qiaoquan; Wei, Cunxu

    2012-10-15

    High-amylose cereal starch has a great benefit on human health. Acid modification is very helpful for application of high-amylose starch in food and non-food industries. In this study, the ordered structure of acid-modified high-amylose rice starch was investigated by GPC, HPAEC, (13)C CP/MAS NMR and XRD. Acid preferentially degraded the amylose, then A chain and short B chain of amylopectin. Relative double helix content and crystallinity both initially increased sharply and then progressively with acid hydrolysis. The relative crystallinity of starches obtained from (13)C CP/MAS NMR was higher than that from XRD. The onset gelatinisation temperature decreased, while the peak and conclusion temperatures increased with increasing hydrolysis time. The endothermic value initially increased and then decreased with acid hydrolysis. The swelling power decreased while solubility increased after acid hydrolysis. These results add to our understanding of the effect of acid hydrolysis on the high-amylose rice starch. Copyright © 2012 Elsevier Ltd. All rights reserved.

  14. Application of Near Infrared Transmittance Spectroscopy (NITS)in Determining Amylose Content of Rice Grain

    Institute of Scientific and Technical Information of China (English)

    XIAO Xin; XIE Xin-hua; CHEN Yi; LUO Weng-yong; CHEN Jian-wei; LIU Yan-zhuo; MAO Xing-xue; LI Xiao-fang

    2004-01-01

    Rice samples were scanned with a Foss Tecator Infratec and their amylose content was determined using a standard wet chemical method. Calibration software along with several mathematical treatments of the sample spectra and several regression methods was used to optimize a near infrared transmittance spectroscopy equation for determining rice amylose content. The standard error of calibration, standard error of cross-validation and regression squared of the calibration were 1.489, 1.761 and 0.885, respectively.

  15. Morphology, structure and gelatinization properties of heterogeneous starch granules from high-amylose maize.

    Science.gov (United States)

    Cai, Canhui; Zhao, Lingxiao; Huang, Jun; Chen, Yifang; Wei, Cunxu

    2014-02-15

    High-amylose cereal endosperm is rich in heterogeneous starch granules. In this paper, we investigated the morphology, structure and gelatinization properties of high-amylose maize endosperm starch. Starch had individual, aggregate and elongated heterogeneous granules. Most of individual granules were round with small size and had one central hilum. Aggregate and elongated granules consisted of many subgranules with central hila, and had irregular and rod/filamentous shapes, respectively. Iodine stained starch granules showed five types of polarization colors: blue, purple, fuchsia, dark red, and interior dark blue and exterior brown. Most of individual and aggregate granules had the color of dark red, that of elongated granules the color of interior dark blue and exterior brown. Amylose was mainly distributed in the hilum region and the circumference of starch granules. Aggregate and elongated granules had higher amylose content than individual granules. Elongated and individual granules had the highest and the lowest gelatinization resistance among high-amylose maize heterogeneous starch granules, respectively. Copyright © 2013 Elsevier Ltd. All rights reserved.

  16. Resistant-starch formation in high-amylose maize starch during Kernel development.

    Science.gov (United States)

    Jiang, Hongxin; Lio, Junyi; Blanco, Mike; Campbell, Mark; Jane, Jay-Lin

    2010-07-14

    The objective of this study was to understand the resistant-starch (RS) formation during kernel development of a high-amylose maize, GEMS-0067 line. The RS content of the starch, determined using AOAC method 991.43 for total dietary fiber, increased with kernel maturation and increase in the amylose/intermediate component (IC) content of the starch. Gelatinization of the native starches showed a major thermal transition with peak temperature at 76.6-81.0 degrees C. An additional peak ( approximately 97.1 degrees C) first appeared 20 days after pollination and then developed into a significant peak on later dates. After removal of lipids from the starch, this peak disappeared, but the conclusion gelatinization temperature remained the same. The proportion of the enthalpy change of the thermal transition above 95 degrees C, calculated from the thermogram of the defatted starch, increased with kernel maturation and was significantly correlated with the RS content of the starch (r = 0.98). These results showed that the increase in crystallites of amylose/IC long-chain double helices in the starch resulted in the increase in the RS content of the starch during kernel development.

  17. Impact of full range of amylose contents on the architecture of starch granules*

    DEFF Research Database (Denmark)

    Goldstein, Avi; Annor, George; Putaux, Jean Luc;

    2016-01-01

    of amorphous regions of starch granules in dilute HCl generating lintners, which typically represent the crystalline lamella of starch granules. Compared to NBS and WBS, AOS granules exhibited an irregular, multilobular morphology with a rough surface texture. AOS displayed lower rates of acid hydrolysis than...... WBS, and AOS reached a plateau at ∼45wt% acid hydrolysis. High-performance anion-exchange chromatography of lintners at equivalent levels of hydrolysis (45wt%) revealed the average degree of polymerization (DP) of AOS lintners was 21, substantially smaller than that of NBS and WBS (DP 42). AOS...... lintners contained the lowest number of chains (NC) per molecule (1.1) compared to NBS (2.8) and WBS (3.3) and the average chain length of AOS, NBS and WBS lintners was 19, 15 and 13, respectively. Hence, both NC and the average chain length correlated with amylose content. The size distribution profile...

  18. QTLs and analysis of the candidate gene for amylose, protein, and moisture content in rice (Oryza sativa L.).

    Science.gov (United States)

    Bruno, Ester; Choi, Yun-Sik; Chung, Il Kyung; Kim, Kyung-Min

    2017-05-01

    In this study, we determined using NIRS the heritability percentage of amylose, protein, and moisture content in polished and unpolished rice in a CNDH population derived from a cross between Cheongcheong and Nagdong rice varieties. The results revealed a higher heritability percentage for the amylose content and compromised heritability for protein and moisture contents. We also conducted QTL analysis of rice for these major components and identified their chromosomal locations on a physical map. We found a total of four QTLs affecting the amylose, protein, and moisture contents of grain on chromosome 7. We constructed physical maps of seven DNA markers responsible for amylose content, six responsible for protein content, and three responsible for moisture content. Furthermore, we classified these genes according to their functions and found 17 genes (over 77%) to be involved in secondary metabolite synthesis, two genes (about 9%), each related to cell function and abiotic stress, and one gene (about 5%) involved in redox signaling.

  19. Detecting relationships between amylose content and amino acid contents of indica rice with conditional approach

    Indian Academy of Sciences (India)

    Chun Hai Shi; Qiong Qiong Zhu; Ke Ming Wang; Guo Ke Ge; Jian Guo Wu; Zhen Ghao Xu

    2010-04-01

    The relationship between the genetic effects of endosperm, cytoplasm and maternal plant on amylose content (AC) and amino acid contents of indica rice was studied using unconditional and conditional analysis methods. The results indicated that the protein content (PC) and brown rice weight (WBR) could significantly affect the relationships between AC and amino acid contents of rice. The phenotypic and genotypic covariances between AC and amino acid contents were most significantly negative under the interference of PC or WBR, but most of the relationships for the paired traits were not significant after excluding the influence of PC or WBR on AC. For the conditional genetic relationship analysis of different genetic systems including endosperm, cytoplasm and maternal plant, visible changes were found in many genetic correlation components between AC and amino acid content after eliminating the influences of PC, especially, for the endosperm or maternal additive effects, endosperm additive or dominance interaction effects and maternal additive interaction effects. The relationships of the paired traits conditioned on WBR were mainly controlled by the endosperm dominance or additive interaction effects.

  20. Biomolecular analyses of starch and starch granule proteins in the high-amylose rice mutant Goami 2.

    Science.gov (United States)

    Butardo, Vito M; Daygon, Venea Dara; Colgrave, Michelle L; Campbell, Peter M; Resurreccion, Adoracion; Cuevas, Rosa Paula; Jobling, Stephen A; Tetlow, Ian; Rahman, Sadequr; Morell, Matthew; Fitzgerald, Melissa

    2012-11-21

    Elevated proportions of amylose in cereals are commonly associated with either the loss of starch branching or starch synthase activity. Goami 2 is a high-amylose mutant of the temperate japonica rice variety Ilpumbyeo. Genotyping revealed that Goami 2 and Ilpumbyeo carry the same alleles for starch synthase IIa and granule-bound starch synthase I genes. Analyses of granule-bound proteins revealed that SSI and SSIIa accumulate inside the mature starch granules of Goami 2, which is similar to the amylose extender mutant IR36ae. However, unlike the amylose extender mutants, SBEIIb was still detectable inside the starch granules of Goami 2. Detection of SBEIIb after protein fractionation revealed that most of the SBEIIb in Goami 2 accumulates inside the starch granules, whereas most of it accumulates at the granule surface in Ilpumbyeo. Exhaustive mass spectrometric characterisations of granule-bound proteins failed to detect any peptide sequence mutation or major post-translational modifications in Goami 2. Moreover, the signal peptide was found to be cleaved normally from the precursor protein, and there is no apparent N-linked glycosylation. Finally, no difference was found in the SBEIIb structural gene sequence of Goami 2 compared with Ilpumbyeo. In contrast, a G-to-A mutation was detected in the SBEIIb gene of IR36ae located at the splice site between exon and intron 11, which could potentially introduce a premature stop codon and produce a truncated form of SBEIIb. It is suggested that the mutation responsible for producing high amylose in Goami 2 is not due to a defect in SBEIIb gene as was observed in IR36ae, even though it produces a phenotype analogous to the amylose extender mutation. Understanding the molecular genetic basis of this mutation will be important in identifying novel targets for increasing amylose and resistant starch contents in rice and other cereals.

  1. Heterogeneous structure and spatial distribution in endosperm of high-amylose rice starch granules with different morphologies.

    Science.gov (United States)

    Cai, Canhui; Huang, Jun; Zhao, Lingxiao; Liu, Qiaoquan; Zhang, Changquan; Wei, Cunxu

    2014-10-15

    Starch granules from high-amylose cereal mutants or transgenic lines usually have different morphologies. It is not clear whether the structure and spatial distribution of starch granules with different morphologies in endosperm is homogeneous or heterogeneous. In the present study, the structure and spatial distribution in endosperm of morphologically different starch granules from high-amylose transgenic rice line (TRS) were investigated. The TRS endosperm had individual, aggregate, elongated, and interior hollow starch granules. The individual and interior hollow granules had the lowest and the highest amylose content and gelatinization resistance, respectively, among the four types of granules. The individual granules were mainly distributed in the middle of the endosperm; the aggregate granules in the starchy endosperm cells between the subaleurone layer and the middle of the endosperm; the elongated granules in the peripheral starchy endosperm cells adjacent to the subaleurone layer; and the interior hollow granules in the subaleurone layer cells.

  2. Molecular Structure and Physicochemical Properties of Starches from Rice with Different Amylose Contents Resulting from Modification of OsGBSSI Activity.

    Science.gov (United States)

    Zhang, Changquan; Chen, Shengjie; Ren, Xinyu; Lu, Yan; Liu, Derui; Cai, Xiuling; Li, Qianfeng; Gao, Jiping; Liu, Qiaoquan

    2017-03-15

    OsGBSSI, encoded by the Waxy (Wx) gene, is the key enzyme in the synthesis of amylose chains. Transgenic rice lines with various GBSSI activities were previously developed via site-directed mutagenesis of the Wx gene in the glutinous cultivar Guanglingxiangnuo (GLXN). In this study, grain morphology, molecular structure, and physicochemical properties were investigated in four transgenic lines with modified OsGBSSI activity and differences in amylose content. A milky opaque appearance was observed in low- and non-amylose rice grains due to air spaces in the starch granules. Gel permeation chromatography (GPC) and high-performance anion-exchange chromatography (HPAEC) analyses showed that although OsGBSSI can synthesize intermediate and extra-long amylopectin chains, it is mainly responsible for the longer amylose chains. Amylose content was positively correlated with trough viscosity, final viscosity, setback viscosity, pasting time, pasting temperature, and gelatinization temperature and negatively with gel consistency, breakdown viscosity, gelatinization enthalpy, and crystallinity. Overall, the findings suggest that OsGBSSI may be also involved in amylopectin biosynthesis, in turn affecting grain appearance, thermal and pasting properties, and the crystalline structure of starches in the rice endosperm.

  3. Morphology and structural properties of high-amylose rice starch residues hydrolysed by amyloglucosidase.

    Science.gov (United States)

    Man, Jianmin; Yang, Yang; Huang, Jun; Zhang, Changquan; Zhang, Fengmin; Wang, Youping; Gu, Minghong; Liu, Qiaoquan; Wei, Cunxu

    2013-06-15

    High-amylose starches are attracting considerable attention because of their potential health benefits and industrial uses. Enzyme hydrolysis of starch is involved in many biological and industrial processes. In this paper, starches were isolated from high-amylose transgenic rice (TRS) and its wild type rice, Te-qing (TQ). The morphological and structural changes of starch residues following Aspergillus niger amyloglucosidase (AAG) hydrolysis were investigated. AAG hydrolysed TQ starch from the granule surface, and TRS starch from the granule interior. During AAG hydrolysis, the content of amorphous structure increased, the contents of ordered structure and single helix decreased, and gelatinisation enthalpy decreased in TQ and TRS starch residues. The A-type polymorph of TRS C-type starch was hydrolysed faster than the B-type polymorph. The short-range ordered structure and B-type polymorph in the peripheral region of the subgranule and the surrounding band of TRS starch increased the resistance of TRS starch to AAG hydrolysis. Copyright © 2012 Elsevier Ltd. All rights reserved.

  4. Presence of amylose crystallites in parboiled rice.

    Science.gov (United States)

    Lamberts, Lieve; Gomand, Sara V; Derycke, Veerle; Delcour, Jan A

    2009-04-22

    Mildly, intermediately, and severely parboiled Jacinto [16% free amylose (FAM) content] and Puntal (26% FAM content) rice samples were submitted to differential scanning calorimetry (DSC) and wide-angle X-ray diffraction (WAXD). DSC thermograms revealed ungelatinized starch only in mildly parboiled rices and retrograded amylopectin in all parboiled samples. Amylose crystallites were present in intermediately and severely parboiled samples but could not be detected due to their high melting temperature. Nonparboiled and parboiled rice DSC profiles showed only type I and type II amylose-lipid complexes, respectively. Intermediately and severely parboiled rice showed a clear V(h)-type (crystalline amylose-lipid complexes) with a superimposed B-type (retrograded amylopectin and/or amylose crystallites) pattern. The mildly parboiled samples showed a mix of A- (native starch crystallites) and V(h)-type patterns (Puntal) and A-, V(h)-, and B-type patterns (Jacinto). Mild acid hydrolysis destroyed the acid labile retrograded amylopectin crystallites and increased the relative abundance of amylose crystallites. Indeed, acid-hydrolyzed intermediately and severely parboiled samples of both cultivars showed a clear B-type diffraction pattern conclusively showing, for the first time, the presence of amylose crystallites. The melting temperature of the amylose crystallites was ca. 135 degrees C, and melting peaks were visible in the DSC thermograms of the intermediately and severely parboiled samples. Their levels depended on the degree of parboiling and FAM content.

  5. Inducing PLA/starch compatibility through butyl-etherification of waxy and high amylose starch.

    Science.gov (United States)

    Wokadala, Obiro Cuthbert; Emmambux, Naushad Mohammad; Ray, Suprakas Sinha

    2014-11-04

    In this study, waxy and high amylose starches were modified through butyl-etherification to facilitate compatibility with polylactide (PLA). Fourier transform infrared spectroscopy, proton nuclear magnetic resonance spectroscopy and wettability tests showed that hydrophobic butyl-etherified waxy and high amylose starches were obtained with degree of substitution values of 2.0 and 2.1, respectively. Differential scanning calorimetry, tensile testing, and scanning electron microscopy (SEM) demonstrated improved PLA/starch compatibility for both waxy and high amylose starch after butyl-etherification. The PLA/butyl-etherified waxy and high amylose starch composite films had higher tensile strength and elongation at break compared to PLA/non-butyl-etherified composite films. The morphological study using SEM showed that PLA/butyl-etherified waxy starch composites had a more homogenous microstructure compared to PLA/butyl-etherified high amylose starch composites. Thermogravimetric analysis showed that PLA/starch composite thermal stability decreased with starch butyl-etherification for both waxy and high amylose starches. This study mainly demonstrates that PLA/starch compatibility can be improved through starch butyl-etherification.

  6. Structure and functional properties of sorghum starches differing in amylose content.

    Science.gov (United States)

    Sang, Yijun; Bean, Scott; Seib, Paul A; Pedersen, Jeff; Shi, Yong-Cheng

    2008-08-13

    Starches were isolated from grains of waxy, heterowaxy, and normal sorghum. To study the relationship between starch structure and functionality and guide applications of these starches, amylose content, amylopectin chain-length distributions, gelatinization and retrogradation, pasting properties, dynamic rheological properties, and in vitro enzyme digestion of raw starches were analyzed. Heterowaxy sorghum starch had intermediate amylose content, pasting properties, and dynamic rheological properties. Stress relaxation was a useful indicator of cooked starch cohesiveness. Cooked heterowaxy sorghum starch (10% solids) had a viscoelastic-solid type of character, whereas cooked waxy sorghum starch behaved like a viscoelastic liquid. Amylopectin of normal sorghum starch had a slightly higher proportion of chains with degree of polymerization (DP) of 6-15 (45.5%) compared with amylopectin of heterowaxy starch (44.1%), which had a gelatinization peak temperature 2 degrees C higher than normal sorghum starch. Heterowaxy sorghum starch contained significantly lower rapidly digestible starch (RDS) and higher resistant starch (RS) than waxy sorghum starch.

  7. Structural changes of high-amylose rice starch residues following in vitro and in vivo digestion.

    Science.gov (United States)

    Man, Jianmin; Yang, Yang; Zhang, Changquan; Zhou, Xinghua; Dong, Ying; Zhang, Fengmin; Liu, Qiaoquan; Wei, Cunxu

    2012-09-12

    High-amylose cereal starch has a great benefit on human health through its resistant starch content. In this paper, starches were isolated from mature grains of high-amylose transgenic rice line (TRS) and its wild-type rice cultivar Te-qing (TQ) and digested in vitro and in vivo. The structural changes of digestive starch residues were characterized using DSC, XRD, (13)C CP/MAS NMR, and ATR-FTIR. TQ starch was very susceptible to digestion; its residues following in vitro and in vivo digestion showed similar structural characteristics with TQ control starch, which suggested that both amorphous and crystalline structures were simultaneously digested. Both amorphous and the long-range order structures were also simultaneously hydrolyzed in TRS starch, but the short-range order (double helix) structure in the external region of TRS starch granule increased with increasing digestion time. The A-type polymorph of TRS C-type starch was hydrolyzed more rapidly than the B-type polymorph. These results suggested that B-type crystallinity and short-range order structure in the external region of starch granule made TRS starch resistant to digestion.

  8. 灌浆结实期高温干旱复合胁迫对稻米直链淀粉及蛋白质含量的影响%Effects of combined high temperature and drought stress on amylose and protein contents at rice grain-filling stage

    Institute of Scientific and Technical Information of China (English)

    高焕晔; 王三根; 宗学凤; 腾中华; 赵芳明; 刘照

    2012-01-01

    Grain-filling stage is a critical stage for rice yield and quality.There have been frequent high temperatures and droughts in several rice production regions in South China due mainly to global climate change but also to local topographic conditions.This has resulted in simultaneous decline in rice yield and quality.This study investigated the combined effects of high temperature and drought stress on rice quality at grain-filling stage via analyzing the changes in amylose and protein contents of indica rice (intro-gression line of H5 with induced genes of Alternanthera hiloxeroides).A pot experiment was conducted in greenhouse conditionswith experimental treatments including optimal temperature plus moderate drought (OT-MD),optimal temperature plus severe drought (OT-SD),high temperature plus well-watered condition (HT-WW),high temperature plus moderate drought (HT-MD),high temperature plus severe drought (HT-SD) and then optimal temperature plus well-watered condition (OT-WW) as the control treatment (CK).In addition to CK,treatment durations were set at 10 days,20 days,30 days and 40 days,respectively.The results showed that while amylose content decreased,that of protein increased during high temperature period.Compared with CK,amylose content dropped by 1.783%~5.987% while that of protein increased by 1.178%~2.741% during 10~40 days heat period.A similartrend was noted for drought conditions.In other words,amylose content decreased while protein content increased during drought.Compared with CK,amylose content decreased by 1.956%~6.270% while protein content increased by 1.153%~2.944% under 10~40 days of OT-MD treatment.Stress-driven changes in amylose and protein contents were higher under OT-SD treatment than under OT-MD treatment.While combined drought and high temperature stress reduced amylose content,it enhanced protein content.The ranges for amylose and protein contents of rice due to combined high temperature and drought stress were higher

  9. Structural and functional properties of alkali-treated high-amylose rice starch.

    Science.gov (United States)

    Cai, Jinwen; Yang, Yang; Man, Jianmin; Huang, Jun; Wang, Zhifeng; Zhang, Changquan; Gu, Minghong; Liu, Qiaoquan; Wei, Cunxu

    2014-02-15

    Native starches were isolated from mature grains of high-amylose transgenic rice TRS and its wild-type rice TQ and treated with 0.1% and 0.4% NaOH for 7 and 14 days at 35 °C. Alkali-treated starches were characterised for structural and functional properties using various physical methods. The 0.1% NaOH treatment had no significant effect on structural and functional properties of starches except that it markedly increased the hydrolysis of starch by amylolytic enzymes. The 0.4% NaOH treatment resulted in some changes in structural and functional properties of starches. The alkali treatment affected granule morphology and decreased the electron density between crystalline and amorphous lamellae of starch. The effect of alkali on the crystalline structure including long- and short-range ordered structure was not pronounced. Compared with control starch, alkali-treated TRS starches had lower amylose content, higher onset and peak gelatinisation temperatures, and faster hydrolysis of starch by HCl and amylolytic enzymes. Copyright © 2013 Elsevier Ltd. All rights reserved.

  10. Morphologies and gelatinization behaviours of high-amylose maize starches during heat treatment.

    Science.gov (United States)

    Chen, Xu; Du, Xianfeng; Chen, Peirong; Guo, Li; Xu, Yang; Zhou, Xiuhong

    2017-02-10

    The granule morphologies and gelatinization behaviours of high-amylose maize starches during heating treatment were investigated by confocal laser scanning microscopy (CLSM) and scanning electron microscopy (SEM). Maltese crosses demonstrated that the high-amylose maize starches maintained a granular structure even at 120°C. The granules of high-amylose maize starches swelled slightly at 100°C and swelled remarkably at approximately 120°C. The destruction of the starch structure began at the centre and expanded rapidly to the periphery. The intense fluorescence of high-amylose maize starch granules gradually became feeble, and the darker region spread outward during heating at 130°C for 30min, indicating that the amylose component may have been damaged and shifted. The starch granules treated at 140°C were substantially destroyed, and the CLSM, normal light microscopy (NL) and SEM images displayed no discernible granules, which indicated that the original starch granules formed a continuous integrated matrix. Copyright © 2016 Elsevier Ltd. All rights reserved.

  11. Effect of nitrogen rate and the environment on physicochemical properties of selected high amylose rice cultivars

    Science.gov (United States)

    Genetic marker haplotypes for the Waxy and alk genes are associated with amylose content and gelatinization temperature, respectively, and are used by breeders to develop rice cultivars that have physicochemical properties desired by the parboiling and canning industries. Cultivars that provide cons...

  12. Structural features and thermal property of propionylated starches with different amylose/amylopectin ratio.

    Science.gov (United States)

    Zhu, Jie; Zhang, Shuyan; Zhang, Binjia; Qiao, Dongling; Pu, Huayin; Liu, Siyuan; Li, Lin

    2017-04-01

    This work concerned the effects of amylose/amylopectin ratio on the structure and thermal stability of propionylated starches with high degree of substitution (DS). Four starches with different amylose content were used to obtain propionylated starches. Acylation partly disrupted granule morphology of native starches, and the imperfection and porous structures of starch granule were intensified along with the increased amylose content. It was noted that the crystalline structure of starch was destroyed and thus intense acylation occurred in both amorphous and crystalline regions. The acylated starch with high-amylose content displayed more ordered region compared to low-amylose starch. Acylation enhanced the thermal stability of starch, and this effect became more evident as the amylose content increased. Thus, the amylose/amylopectin ratio has been confirmed capable of affecting the structure and thermal behaviors of hydrophobic propionylated starch, which is of value for the design of starchy materials with tailored thermal stability.

  13. Understanding the structural features of high-amylose maize starch through hydrothermal treatment.

    Science.gov (United States)

    Yang, Jianing; Xie, Fengwei; Wen, Wenqiang; Chen, Ling; Shang, Xiaoqin; Liu, Peng

    2016-03-01

    In this study, high-amylose starches were hydrothermally-treated and the structural changes were monitored with time (up to 12h) using scanning electron microscopy (SEM), confocal laser scanning microscopy (CLSM), small-angle X-ray scattering (SAXS), X-ray diffraction (XRD), and differential scanning calorimetry (DSC). When high-amylose starches were treated in boiling water, half-shell-like granules were observed by SEM, which could be due to the first hydrolysis of the granule inner region (CLSM). This initial hydrolysis could also immediately (0.5h) disrupt the semi-crystalline lamellar regularity (SAXS) and dramatically reduce the crystallinity (XRD); but with prolonged time of hydrothermal treatment (≥2 h), might allow the perfection or formation of amylose single helices, resulting in slightly increased crystallinity (XRD and DSC). These results show that the inner region of granules is composed of mainly loosely-packed amylopectin growth rings with semi-crystalline lamellae, which are vulnerable under gelatinization or hydrolysis. In contrast, the periphery is demonstrated to be more compact, possibly composed of amylose and amylopectin helices intertwined with amylose molecules, which require greater energy input (higher temperature) for disintegration.

  14. In vitro digestibility and in vivo glucose response of native and physically modified rice starches varying amylose contents.

    Science.gov (United States)

    Van Hung, Pham; Chau, Huynh Thi; Phi, Nguyen Thi Lan

    2016-01-15

    The native and physically modified rice starches with varying amylose contents were subjected to investigate the in vitro digestibility and the in vivo glucose tolerance in mice. The amylose and resistant starch (RS) contents of five native rice starches ranged in 4.7-30.6% and 6.3-11.8%, respectively. The RS contents of rice starches increased to 18.5-23.9% after heat-moisture treatment (HMT) and to 19.5-26.9% after annealing treatment (ANN). The heat-moisture and annealing treatments significantly reduced glycemic index (GI) values of the rice starches. GI values of the native, heat-moisture treated and annealed rice starches ranged in 68.9-100, 61.2-88.9 and 21.2-43.9, respectively. There was no correlation between amylose contents and the RS contents or GI values, while a strong negative correlation between RS contents and GI values was found (R(2)=-0.747, P<0.01).

  15. Poly(vinyl alcohol) composite films with high percent elongation prepared from amylose-fatty ammonium salt inclusion complexes

    Science.gov (United States)

    Amylose inclusion complexes prepared from cationic fatty ammonium salts and jet-cooked high amylose starch were combined with poly(vinyl alcohol) (PVOH) to form glycerol-plasticized films. Their tensile properties were compared with similar films prepared previously with analogous anionic fatty acid...

  16. Extrusion Conditions and Amylose Content Affect Physicochemical Properties of Extrudates Obtained from Brown Rice Grains.

    Science.gov (United States)

    González, Rolando José; Pastor Cavada, Elena; Vioque Peña, Javier; Torres, Roberto Luis; De Greef, Dardo Mario; Drago, Silvina Rosa

    2013-01-01

    The utilization of whole grains in food formulations is nowadays recommended. Extrusion cooking allows obtaining precooked cereal products and a wide range of ready-to-eat foods. Two rice varieties having different amylose content (Fortuna 16% and Paso 144, 27%) were extruded using a Brabender single screw extruder. Factorial experimental design was used to study the effects of extrusion temperature (160, 175, and 190°C) and grits moisture content (14%, 16.5%, and 19%) on extrudate properties. Specific mechanical energy consumption (SMEC), radial expansion (E), specific volume (SV), water absorption (WA), and solubility (S) were determined on each extrudate sample. In general, Fortuna variety showed higher values of SMEC and S (703-409 versus 637-407 J/g; 33.0-21.0 versus 20.1-11.0%, resp.) than those of Paso 144; on the contrary SV (8.64-3.47 versus 8.27-4.53 mL/g) and WA tended to be lower (7.7-5.1 versus 8.4-6.6 mL/g). Both varieties showed similar values of expansion rate (3.60-2.18). Physical characteristics depended on extrusion conditions and rice variety used. The degree of cooking reached by Paso rice samples was lower than that obtained for Fortuna. It is suggested that the presence of germ and bran interfered with the cooking process, decreasing friction level and broadening residence time distribution.

  17. Starch aerogel beads obtained from inclusion complexes prepared from high amylose starch and sodium palmitate

    Science.gov (United States)

    Starch aerogels are a class of low density highly porous renewable materials currently prepared from retrograded starch gels and are of interest for their good surface area, porosity, biocompatibility, and biodegradability. Recently, we have reported on starches containing amylose-fatty acid salt h...

  18. Extrusion Conditions and Amylose Content Affect Physicochemical Properties of Extrudates Obtained from Brown Rice Grains

    Science.gov (United States)

    González, Rolando José; Pastor Cavada, Elena; Vioque Peña, Javier; Torres, Roberto Luis; De Greef, Dardo Mario; Drago, Silvina Rosa

    2013-01-01

    The utilization of whole grains in food formulations is nowadays recommended. Extrusion cooking allows obtaining precooked cereal products and a wide range of ready-to-eat foods. Two rice varieties having different amylose content (Fortuna 16% and Paso 144, 27%) were extruded using a Brabender single screw extruder. Factorial experimental design was used to study the effects of extrusion temperature (160, 175, and 190°C) and grits moisture content (14%, 16.5%, and 19%) on extrudate properties. Specific mechanical energy consumption (SMEC), radial expansion (E), specific volume (SV), water absorption (WA), and solubility (S) were determined on each extrudate sample. In general, Fortuna variety showed higher values of SMEC and S (703–409 versus 637–407 J/g; 33.0–21.0 versus 20.1–11.0%, resp.) than those of Paso 144; on the contrary SV (8.64–3.47 versus 8.27–4.53 mL/g) and WA tended to be lower (7.7–5.1 versus 8.4–6.6 mL/g). Both varieties showed similar values of expansion rate (3.60–2.18). Physical characteristics depended on extrusion conditions and rice variety used. The degree of cooking reached by Paso rice samples was lower than that obtained for Fortuna. It is suggested that the presence of germ and bran interfered with the cooking process, decreasing friction level and broadening residence time distribution. PMID:26904605

  19. Extrusion Conditions and Amylose Content Affect Physicochemical Properties of Extrudates Obtained from Brown Rice Grains

    Directory of Open Access Journals (Sweden)

    Rolando José González

    2013-01-01

    Full Text Available The utilization of whole grains in food formulations is nowadays recommended. Extrusion cooking allows obtaining precooked cereal products and a wide range of ready-to-eat foods. Two rice varieties having different amylose content (Fortuna 16% and Paso 144, 27% were extruded using a Brabender single screw extruder. Factorial experimental design was used to study the effects of extrusion temperature (160, 175, and 190°C and grits moisture content (14%, 16.5%, and 19% on extrudate properties. Specific mechanical energy consumption (SMEC, radial expansion (E, specific volume (SV, water absorption (WA, and solubility (S were determined on each extrudate sample. In general, Fortuna variety showed higher values of SMEC and S (703–409 versus 637–407 J/g; 33.0–21.0 versus 20.1–11.0%, resp. than those of Paso 144; on the contrary SV (8.64–3.47 versus 8.27–4.53 mL/g and WA tended to be lower (7.7–5.1 versus 8.4–6.6 mL/g. Both varieties showed similar values of expansion rate (3.60–2.18. Physical characteristics depended on extrusion conditions and rice variety used. The degree of cooking reached by Paso rice samples was lower than that obtained for Fortuna. It is suggested that the presence of germ and bran interfered with the cooking process, decreasing friction level and broadening residence time distribution.

  20. Development of EMS-induced mutation population for amylose and resistant starch variation in bread wheat (Triticum aestivum) and identification of candidate genes responsible for amylose variation.

    Science.gov (United States)

    Mishra, Ankita; Singh, Anuradha; Sharma, Monica; Kumar, Pankaj; Roy, Joy

    2016-10-06

    Starch is a major part of cereal grain. It comprises two glucose polymer fractions, amylose (AM) and amylopectin (AP), that make up about 25 and 75 % of total starch, respectively. The ratio of the two affects processing quality and digestibility of starch-based food products. Digestibility determines nutritional quality, as high amylose starch is considered a resistant or healthy starch (RS type 2) and is highly preferred for preventive measures against obesity and related health conditions. The topic of nutrition security is currently receiving much attention and consumer demand for food products with improved nutritional qualities has increased. In bread wheat (Triticum aestivum L.), variation in amylose content is narrow, hence its limited improvement. Therefore, it is necessary to produce wheat lines or populations showing wide variation in amylose/resistant starch content. In this study, a set of EMS-induced M4 mutant lines showing dynamic variation in amylose/resistant starch content were produced. Furthermore, two diverse mutant lines for amylose content were used to study quantitative expression patterns of 20 starch metabolic pathway genes and to identify candidate genes for amylose biosynthesis. A population comprising 101 EMS-induced mutation lines (M4 generation) was produced in a bread wheat (Triticum aestivum) variety. Two methods of amylose measurement in grain starch showed variation in amylose content ranging from ~3 to 76 % in the population. The method of in vitro digestion showed variation in resistant starch content from 1 to 41 %. One-way ANOVA analysis showed significant variation (p wheat. It is also useful for the study of the genetic and molecular basis of amylose/resistant starch variation in wheat. Furthermore, gene expression analysis of 20 starch metabolic genes in the two diverse mutant lines (low and high amylose mutants) indicates that in addition to key genes, several other genes (such as phosphorylases, isoamylases, and

  1. A novel wheat variety with elevated content of amylose increases resistant starch formation and may beneficially influence glycaemia in healthy subjects

    Directory of Open Access Journals (Sweden)

    Elin Östman

    2011-08-01

    Full Text Available Previous studies indicate that elevated amylose content in products from rice, corn, and barley induce lower postprandial glycaemic responses and higher levels of resistant starch (RS. Consumption of slowly digestible carbohydrates and RS has been associated with health benefits such as decreased risk of diabetes and cardiovascular disease.To evaluate the postprandial glucose and insulin responses in vivo to bread products based on a novel wheat genotype with elevated amylose content (38%.Bread was baked from a unique wheat genotype with elevated amylose content, using baking conditions known to promote amylose retrogradation. Included test products were bread based on whole grain wheat with elevated amylose content (EAW, EAW with added lactic acid (EAW-la, and ordinary whole grain wheat bread (WGW. All test breads were baked at pumpernickel conditions (20 hours, 120°C. A conventionally baked white wheat bread (REF was used as reference. Resistant starch (RS content was measured in vitro and postprandial glucose and insulin responses were tested in 14 healthy subjects.The results showed a significantly higher RS content (on total starch basis in breads based on EAW than in WGW (p<0.001. Lactic acid further increased RS (p<0.001 compared with both WGW and EAW. Breads baked with EAW induced lower postprandial glucose response than REF during the first 120 min (p<0.05, but there were no significant differences in insulin responses. Increased RS content per test portion was correlated to a reduced glycaemic index (GI (r= − 0.571, p<0.001.This study indicates that wheat with elevated amylose content may be preferable to other wheat genotypes considering RS formation. Further research is needed to test the hypothesis that bread with elevated amylose content can improve postprandial glycaemic response.

  2. Generation of High-Amylose Rice through CRISPR/Cas9-Mediated Targeted Mutagenesis of Starch Branching Enzymes

    Science.gov (United States)

    Sun, Yongwei; Jiao, Guiai; Liu, Zupei; Zhang, Xin; Li, Jingying; Guo, Xiuping; Du, Wenming; Du, Jinlu; Francis, Frédéric; Zhao, Yunde; Xia, Lanqin

    2017-01-01

    Cereals high in amylose content (AC) and resistant starch (RS) offer potential health benefits. Previous studies using chemical mutagenesis or RNA interference have demonstrated that starch branching enzyme (SBE) plays a major role in determining the fine structure and physical properties of starch. However, it remains a challenge to control starch branching in commercial lines. Here, we use CRISPR/Cas9 technology to generate targeted mutagenesis in SBEI and SBEIIb in rice. The frequencies of obtained homozygous or bi-allelic mutant lines with indels in SBEI and SBEIIb in T0 generation were from 26.7 to 40%. Mutations in the homozygous T0 lines stably transmitted to the T1 generation and those in the bi-allelic lines segregated in a Mendelian fashion. Transgene-free plants carrying only the frame-shifted mutagenesis were recovered in T1 generation following segregation. Whereas no obvious differences were observed between the sbeI mutants and wild type, sbeII mutants showed higher proportion of long chains presented in debranched amylopectin, significantly increased AC and RS content to as higher as 25.0 and 9.8%, respectively, and thus altered fine structure and nutritional properties of starch. Taken together, our results demonstrated for the first time the feasibility to create high-amylose rice through CRISPR/Cas9-mediated editing of SBEIIb. PMID:28326091

  3. Lowering Grain Amylose Content in Backcross Offsprings of indica Rice Variety 057 by Molecular Marker-Assisted Selection

    Institute of Scientific and Technical Information of China (English)

    ZHANG Shi-lu; NI Da-hu; YI Cheng-xin; LI Li; WANG Xiu-feng; WANG Zong-yang; YANG Jian-bo

    2005-01-01

    To lower the amylose content (AC) of the indica rice restorer line 057 with high AC, backcrosses were made respectively by using four indica varieties (R367, 91499, Yanhui 559, Hui 527) as low AC donor parents and 057 as the recurrent parent. A molecular marker (PCR-Acc I) was used to identify the genotypes (GG, TT and GT) of the waxy (Wx) gene. Plants with GT genotype were selected and used as female parent and crossed with 057 to advance generation. The ACs of rice grains harvested from plants with different Wx genotypes were measured and compared to analyze the efficiency of marker-assisted selection. The ACs of the rice grain, harvested from the plants of Wx genotypes GG, GT and TT, were higher than 20%, in the range of 17.7-28.5%, and less than 18%, respectively. The PCR-Acc I marker could be used for efficiently lowering the AC of 057 through backcrossing, and there were some influence of parental genetic background on the AC of rice grains with the same Wx genotype.

  4. Sensory characteristics of high-amylose maize-resistant starch in three food products.

    Science.gov (United States)

    Maziarz, Mindy; Sherrard, Melanie; Juma, Shanil; Prasad, Chandan; Imrhan, Victorine; Vijayagopal, Parakat

    2013-03-01

    Type 2 resistant starch from high-amylose maize (HAM-RS2) is considered a functional ingredient due to its positive organoleptic and physiochemical modifications associated with food and physiological benefits related to human health. The sensory characteristics of three types of food products (muffins, focaccia bread, and chicken curry) with and without HAM-RS2 were evaluated using a 9-point hedonic scale. The HAM-RS2-enriched muffins, focaccia bread, and chicken curry contained 5.50 g/100 g, 13.10 g/100 g, and 8.94 g/100 g RS, respectively, based on lyophilized dry weight. The HAM-RS2-enriched muffin had higher moisture content and was perceived as being significantly moister than the control according to the sensory evaluation. The addition of HAM-RS2 to muffins significantly enhanced all sensory characteristics and resulted in a higher mean overall likeability score. The HAM-RS2-enriched focaccia bread appeared significantly darker in color, was more dense, and had the perception of a well-done crust versus the control. A grainer texture was observed with the chicken curry containing HAM-RS2 which did not significantly affect overall likeability. We concluded that the addition of HAM-RS2 may not significantly alter consumer's acceptability in most food products.

  5. Inducing PLA/starch compatibility through butyl-etherification of waxy and high amylose starch

    CSIR Research Space (South Africa)

    Wokadala, OC

    2014-06-01

    Full Text Available Carbohydrate Polymers Vol. 112 Inducing PLA/starch compatibility through butyl-etherification ofwaxy and high amylose starch Obiro Cuthbert Wokadalaa,b, Naushad Mohammad Emmambuxc,Suprakas Sinha Raya,b,c,∗ aDST/CSIR National Centre for Nanostructured... Materials, Council for Scientific and Industrial Research, 1-Meiring Naude Road, Brummeria, Pretoria 0001,South Africa bDepartment of Applied Chemistry, University of Johannesburg, Doornfontein, Johannesburg 2028, South Africa cDepartment of Food Science...

  6. Insights into the hierarchical structure and digestion rate of alkali-modulated starches with different amylose contents.

    Science.gov (United States)

    Qiao, Dongling; Yu, Long; Liu, Hongsheng; Zou, Wei; Xie, Fengwei; Simon, George; Petinakis, Eustathios; Shen, Zhiqi; Chen, Ling

    2016-06-25

    Combined analytical techniques were used to explore the effects of alkali treatment on the multi-scale structure and digestion behavior of starches with different amylose/amylopectin ratios. Alkali treatment disrupted the amorphous matrix, and partial lamellae and crystallites, which weakened starch molecular packing and eventually enhanced the susceptibility of starch to alkali. Stronger alkali treatment (0.5% w/w) made this effect more prominent and even transformed the dual-phase digestion of starch into a triple-phase pattern. Compared with high-amylose starch, regular maize starch, which possesses some unique structure characteristics typically as pores and crystallite weak points, showed evident changes of hierarchical structure and in digestion rate. Thus, alkali treatment has been demonstrated as a simple method to modulate starch hierarchical structure and thus to realize the rational development of starch-based food products with desired digestibility.

  7. Microstructure and ultrastructure of high-amylose rice resistant starch granules modified by antisense RNA inhibition of starch branching enzyme.

    Science.gov (United States)

    Wei, Cunxu; Qin, Fengling; Zhu, Lijia; Zhou, Weidong; Chen, Yifang; Wang, Youping; Gu, Minghong; Liu, Qiaoquan

    2010-01-27

    A high-amylose transgenic rice line (TRS) modified by antisense RNA inhibition of starch branching enzymes revealed a resistant starch-rich quality. Compound starch granules in whole grains of the regular rice cultivar Teqing (TQ) were readily split during fracturing, whereas the starch granules in TRS were structurally intact and showed large voluminous, non-angular rounded bodies and elongated, filamentous structures tolerant of fracturing. In isolated preparation, TQ starch granules broke up into separate polygonal granules, whereas TRS starch granules kept their intactness. TRS starch granules consisted of packed smaller subgranules, some of which located at the periphery of starch granules were fused to each other with adjacent ones forming a thick band or wall encircling the entire circumference of the granules. TQ starch granules had a high concentration of amylose in the concentric hilum, whereas TRS starch granules showed a relatively even distribution of amylose with intense amylose in both hilum and band.

  8. High Amylose White Rice Reduces Post-Prandial Glycemic Response but Not Appetite in Humans

    Directory of Open Access Journals (Sweden)

    Alison M. Zenel

    2015-07-01

    Full Text Available The present study compared the effects of three rice cultivars on postprandial glycemic control and appetite. A single-blind, randomized, crossover clinical trial was performed with 18 healthy subjects, nine males and nine females. Three treatments were administered at three separate study visits: commercially available conventional white rice (short grain, specialty high amylose white rice 1 (Dixiebelle, and specialty high amylose white rice 2 (Rondo. Postprandial capillary blood glucose, venous blood glucose and insulin measurements, and appetite visual analog scale (VAS surveys were done over the course of two hours. The capillary blood glucose concentrations were significantly lower for Rondo compared to short grain rice at 30 min, and for Dixiebelle and Rondo compared to short grain rice at 45, 60, and 120 min. Capillary blood glucose area under the curve (AUC was significantly lower for Dixiebelle and Rondo compared to short grain rice. Subjects were significantly more hungry at 30 min after Dixiebelle intake than Rondo intake, but there were no other significant effects in appetite ratings. The present study determined that intake of high amylose rice with resistant starch (RS can attenuate postprandial blood glucose and insulin response in comparison to short grain rice.

  9. [Effect of dynamic high-pressure micro-fluidization on the structure of maize amylose].

    Science.gov (United States)

    Tu, Zong-Cai; Yin, Yue-Bin; Zhang, Qiu; Wang, Hui

    2013-05-01

    The effect of dynamic high-pressure micro-fluidization (DHPM) at 80, 120, 160, and 200 MPa on the structure of maize amylose was investigated using scanning electron microscopy (SEM), atomic force microscope (AFM), Xray diffraction, and FT-IR spectroscopy. SEM analysis showed that the surface appearances of maize amylose were altered and the starch granules were partially congregated together after DHPM treatment. AFM images showed that the treated starch molecules are cross-linked to each other and arranged in a close mesh structure. Xray diffraction spectra and IR spectra indicated that relative crystallinity declined gradually with the pressure increasing. The results provide a theoretical basis for starch modification of DHPM.

  10. A three generation reproduction study with Sprague-Dawley rats consuming high-amylose transgenic rice.

    Science.gov (United States)

    Zhou, Xing Hua; Dong, Ying; Zhao, Yan Sheng; Xiao, Xiang; Wang, Yun; He, Yuan Qing; Liu, Qiao Quan

    2014-12-01

    The transgenic rice line (TRS) enriched with amylose and resistant starch (RS) was developed by antisense RNA inhibition of starch-branching enzymes. Cereal starch with high amylose has a great benefit on human health through its resistant starch. In order to evaluate the effect of transgenic rice on rats, the rats were fed diets containing 70% TRS rice flour, its near-isogenic rice flour or the standard diet as the control through three generations. In the present study, clinical performance, reproductive capacity and pathological responses including body weight, food consumption, reproductive data, hematological parameters, serum chemistry components, organ relative weights and histopathology were examined. Some statistically significant differences were observed in rats consuming the high amylose rice diet when compared to rats fed the near-isogenic control rice diet or the conventional (non-rice) standard diet. These differences were generally of small magnitude, appeared to be random in nature, and were within normal limits for the strain of rat used, and were therefore not considered to be biologically meaningful or treatment related.

  11. Highly branched dextrin prepared from high-amylose maize starch using waxy rice branching enzyme (WRBE).

    Science.gov (United States)

    Tian, Yaoqi; Chen, Huangli; Zhang, Xiwen; Zhan, Jinling; Jin, Zhengyu; Wang, Jinpeng

    2016-07-15

    Branching enzyme (BE, EC 2.4.1.18) was isolated from the developing waxy rice endosperm and used to prepare a highly branched dextrin based on high-amylose maize starch (HAMS) as a substrate. The molecular mass of the starch initially degraded quickly from 2.5 × 10(7) to 4.1 × 10(5)Da, and then stabilized, with a minimal increase during the BE treatment. The resultant branched dextrin had a narrow size distribution, with a mean molecular weight of 5.1 × 10(5)Da and a polydispersity index (PI) of 1.567. The results of high-performance anion exchange chromatography indicated that the degree of polymerization (DP) of the branched chains ranged from 3 to 27; approximately 75.26% of these chains were short (DPhighly branched dextrins with a narrow size distribution and short side chains. Copyright © 2016 Elsevier Ltd. All rights reserved.

  12. Relationship Between the First Base of the Donor Splice Site of Waxy Gene Intron 1 and Amylose Content in Yunnan Indigenous Rice Varieties

    Institute of Scientific and Technical Information of China (English)

    2007-01-01

    There exists a single nucleotide polymorphism, G or T, at the first base of the donor splice site of waxy gene intron 1 in rice. In order to study the relationship between the first base of the donor splice site of waxy gene intron 1 and amylose content in rice, the one-step PCR method was used to determine whether it is G or T in 220 Yunnan indigenous rice varieties from 14 districts, 55 towns/counties of Yunnan Province, and 101 varieties of which were validated by the PCR-Acc I method. According to the G/T polymorphism, 164 rice varieties showed GG-genotype, while the other 56 fell into TT-genotype, accounting for 74.5% and 25.5% of all the test varieties, respectively. When all the rice varieties were divided into indica and japonica subspecies, it was found that 80.5% of indica rice and 67.0% of japonica rice belonged to GG-genotype. The rice varieties with GG-genotype had significantly higher amylose content (18.95% on average) than those with TT-genotype (all below 16%), but 33 rice varieties with GG-genotype still had low amylose content ranging from 3.91% to 15.93%, and most of them came from the Dai minority area in the Southwest of Yunnan Province. However, there was no significant difference in the mean amylose content of the same GG or TT genotypes between indica and japonica rice,suggesting that different genetic backgrounds, indica or japonica, had no effect on amylose content. The coefficient of correlation between the genotype and amylose content was 0.733 (P<0.01).

  13. Barley starch bioengineering for high phosphate and amylose

    DEFF Research Database (Denmark)

    Blennow, Per Gunnar Andreas; Carciofi, Massimiliano; Shaik, Shahnoor Sultana

    2011-01-01

    of the three genes encoding the starch-branching enzymes SBEI, SBEIIa, and SBEIIb using a triple RNAi chimeric hairpin construct we generated a virtually amylopectin-free barley. The grains of the transgenic lines were shrunken and had a yield of around 80% of the control line. The starch granules were...... irregular and showed no distinct melting enthalpy and very weak X-ray scattering. Hyperphosphorylated barley starch was achieved by endosperm specific overexpression of the potato glucan water dikinase1 (StGWD1). The content of phosphate esters in this starch was tenfold higher than the control lines...

  14. Starch with high amylose and low in vitro digestibility increases short-chain fatty acid absorption, reduces peak insulin secretion, and modulates incretin secretion in pigs.

    Science.gov (United States)

    Regmi, Prajwal R; van Kempen, Theo A T G; Matte, J Jacques; Zijlstra, Ruurd T

    2011-03-01

    Diets containing different starch types affect peripheral glucose and insulin responses. However, the role of starch chemistry in kinetics of nutrient absorption and insulin and incretin secretion is poorly understood. Four portal vein-catheterized pigs (35.0 ± 0.2 kg body weight) consumed 4 diets containing 70% purified starch [0-63.2% amylose content and 0.22 (slowly) to 1.06%/min (rapidly) maximum rate of in vitro digestion] for 7-d periods in a 4 × 4 Latin square. On d 7, blood was collected for 12 h postprandial with simultaneous blood flow measurement for determining the net portal appearance (NPA) of nutrients and hormones. The NPA of glucose, insulin, C-peptide, and glucose-dependent insulinotropic polypeptide (GIP) during 0-4 h postprandial were lower (P starch. The peak NPA of insulin occurred prior to that of glucose when pigs consumed diets containing rapidly digestible starch. The kinetics of insulin secretion had a linear positive relation with kinetics of NPA of glucose (R(2) = 0.50; P starch with high amylose and low in vitro digestibility decreases the kinetics of glucose absorption and insulin and GIP secretion and increases SCFA absorption and glucagon-like peptide-1 secretion. In conclusion, starch with high amylose content and a lower rate and extent of in vitro digestion decreased glucose absorption and insulin secretion and increased SCFA absorption.

  15. Effect of melt-processing and ultrasonic treatment on physical properties of high-amylose maize starch.

    Science.gov (United States)

    Lima, Felipe F; Andrade, Cristina T

    2010-04-01

    High-amylose maize starch (Hylon VII) was submitted to melt-processing in an internal mixer at 100 degrees C and 40 rpm for 8 min. Glycerol was used as a plasticiser at different polymer/glycerol ratios. Torque and temperature curves were obtained. After glycerol extraction with ethyl alcohol, the samples were dispersed at 5 g/L, and treated by ultrasound radiation at the same conditions for 30 min. Samples were characterised by (1)H NMR spectrometry, viscosity measurements, and X-ray diffractometry. The results revealed that both glycerol and water had an important role on the crystallinity properties of the resulting products. Melt-processed and sonicated samples showed similar (1)H NMR spectra. Ultrasound treatment caused a significant reduction in intrinsic viscosity for the sample previously processed with the highest glycerol content, probably because of its higher solubility in water.

  16. Comparative methodologies for measuring metabolizable energy of various types of resistant high amylose corn starch.

    Science.gov (United States)

    Tulley, Richard T; Appel, Marko J; Enos, Tanya G; Hegsted, Maren; McCutcheon, Kathleen L; Zhou, Jun; Raggio, Anne M; Jeffcoat, Roger; Birkett, Anne; Martin, Roy J; Keenan, Michael J

    2009-09-23

    Energy values of high amylose corn starches high in resistant starch (RS) were determined in vivo by two different methodologies. In one study, energy values were determined according to growth relative to glucose-based diets in rats fed diets containing RS(2), heat-treated RS(2) (RS(2)-HT), RS(3), and amylase predigested versions to isolate the RS component. Net metabolizable energy values ranged from 2.68 to 3.06 kcal/g for the RS starches, and 1.91-2.53 kcal/g for the amylase predigested versions. In a second study, rats were fed a diet containing RS(2)-HT and the metabolizable energy value was determined by bomb calorimetry. The metabolizable energy value was 2.80 kcal/g, consistent with Study 1. Thus, high amylose corn based RS ingredients and their amylase predigested equivalents have energy values approximately 65-78% and 47-62% of available starch (Atwater factor), respectively, according to the RS type (Garcia, T. A.; McCutcheon, K. L.; Francis, A. R.; Keenan, M. J.; O'Neil, C. E.; Martin, R. J.; Hegsted, M. The effects of resistant starch on gastrointestinal organs and fecal output in rats. FASEB J. 2003, 17, A335).

  17. In vitro utilization of amylopectin and high-amylose maize (Amylomaize) starch granules by human colonic bacteria.

    Science.gov (United States)

    Wang, X; Conway, P L; Brown, I L; Evans, A J

    1999-11-01

    It has been well established that a certain amount of ingested starch can escape digestion in the human small intestine and consequently enters the large intestine, where it may serve as a carbon source for bacterial fermentation. Thirty-eight types of human colonic bacteria were screened for their capacity to utilize soluble starch, gelatinized amylopectin maize starch, and high-amylose maize starch granules by measuring the clear zones on starch agar plates. The six cultures which produced clear zones on amylopectin maize starch- containing plates were selected for further studies for utilization of amylopectin maize starch and high-amylose maize starch granules A (amylose; Sigma) and B (Culture Pro 958N). Sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) was used to detect bacterial starch-degrading enzymes. It was demonstrated that Bifidobacterium spp., Bacteroides spp., Fusobacterium spp., and strains of Eubacterium, Clostridium, Streptococcus, and Propionibacterium could hydrolyze the gelatinized amylopectin maize starch, while only Bifidobacterium spp. and Clostridium butyricum could efficiently utilize high-amylose maize starch granules. In fact, C. butyricum and Bifidobacterium spp. had higher specific growth rates in the autoclaved medium containing high-amylose maize starch granules and hydrolyzed 80 and 40% of the amylose, respectively. Starch-degrading enzymes were cell bound on Bifidobacterium and Bacteroides cells and were extracellular for C. butyricum. Active staining for starch-degrading enzymes on SDS-PAGE gels showed that the Bifidobacterium cells produced several starch-degrading enzymes with high relative molecular (M(r)) weights (>160,000), medium-sized relative molecular weights (>66,000), and low relative molecular weights (starch.

  18. Particle size fractionation of high-amylose rice (Goami 2) flour as an oil barrier in a batter-coated fried system

    Science.gov (United States)

    The particle size effects of high-amylose rice (Goami 2) flour on quality attributes of frying batters were characterized in terms of physicochemical, rheological, and oil-resisting properties. High-amylose rice flours were fractionated into four fractions (70, 198, 256, and 415 µm) of which morpho...

  19. Acetylated rice starches films with different levels of amylose: Mechanical, water vapor barrier, thermal, and biodegradability properties.

    Science.gov (United States)

    Colussi, Rosana; Pinto, Vânia Zanella; El Halal, Shanise Lisie Mello; Biduski, Bárbara; Prietto, Luciana; Castilhos, Danilo Dufech; Zavareze, Elessandra da Rosa; Dias, Alvaro Renato Guerra

    2017-04-15

    Biodegradable films from native or acetylated starches with different amylose levels were prepared. The films were characterized according to the mechanical, water vapor barrier, thermal, and biodegradability properties. The films from acetylated high amylose starches had higher moisture content and water solubility than the native high amylose starch film. However, the acetylation did not affect acid solubility of the films, regardless of the amylose content. Films made from high and medium amylose rice starches were obtained; however low amylose rice starches, whether native or acetylated, did not form films with desirable characteristics. The acetylation decreased the tensile strength and increased the elongation of the films. The acetylated starch-based films had a lower decomposition temperature and higher thermal stability than native starch films. Acetylated starches films exhibited more rapid degradation as compared with the native starches films. Copyright © 2016 Elsevier Ltd. All rights reserved.

  20. Preparation and characterization of aqueous dispersions of high amylose starch and conjugated linoleic acid complex.

    Science.gov (United States)

    Seo, Tae-Rang; Kim, Hee-Young; Lim, Seung-Taik

    2016-11-15

    Crystalline starch-CLA complexes were prepared by blending an alcoholic solution of conjugated linoleic acid (CLA) in an aqueous high-amylose maize starch dispersion. Recovery yield of CLA in the precipitates obtained by centrifuging the dispersion was dependent on reaction conditions such as temperature, time and pH. The CLA recovery reached a maximum when the reaction was performed at 90°C for 6h at neutral pH, with 67.7% of the initial CLA being co-precipitated with starch. The precipitates contained amylose-CLA complex exhibiting a V6I-type crystalline structure under X-ray diffraction analysis and a type II polymorph under DSC analysis. Ultrasonic treatment for the re-dispersed starch-CLA complex in water resulted in the reduction of hydrodynamic diameter of the complex particles to 201.5nm. The dispersion exhibited a zeta potential of -27.0mV and remained stable in an ambient storage without forming precipitates for more than 4weeks. Copyright © 2016 Elsevier Ltd. All rights reserved.

  1. Impact of micronization on rapidly digestible, slowly digestible, and resistant starch concentrations in normal, high-amylose, and waxy barley.

    Science.gov (United States)

    Emami, Shahram; Meda, Venkatesh; Pickard, Mark D; Tyler, Robert T

    2010-09-08

    This study determined the effect of micronization (high intensity infrared heating) on the concentrations of rapidly digestible starch (RDS), slowly digestible starch (SDS), and resistant starch (RS) in normal barley (NB), high-amylose barley (HAB), and waxy barley (WB). The gelatinized starch contents and the thermal properties of the micronized samples also were determined. Samples of each barley type were tempered to each of three moisture contents (approximately 17, 31, or 41%), and then each tempered sample was micronized to each of three surface temperatures (100, 120, or 140 degrees C). Micronized barley samples were substantially lower in RS and in SDS and, therefore, higher in RDS than corresponding unprocessed samples. In general, higher concentrations of RDS and of gelatinized starch were associated with higher initial moisture contents and higher surface temperatures. The lowest concentrations of RS were observed in micronized WB samples. Similar concentrations of RS were observed in corresponding NB and HAB samples. Micronization resulted in slight increases in the onset (To), peak (Tp), and completion (Tc) gelatinization temperatures and in substantial reductions in the gelatinization enthalpy (DeltaH), the latter reflecting the levels of gelatinized starch in micronized samples, particularly in samples micronized at higher moisture contents and to higher surface temperatures. Endothermic transitions were evident only in samples tempered to 17% moisture or 31% moisture (surface temperature of 100 degrees C only).

  2. Formation of semi-compound C-type starch granule in high-amylose rice developed by antisense RNA inhibition of starch-branching enzyme.

    Science.gov (United States)

    Wei, Cunxu; Qin, Fengling; Zhou, Weidong; Chen, Yifang; Xu, Bin; Wang, Youping; Gu, Minghong; Liu, Qiaoquan

    2010-10-27

    Cereal starch granules with high-amylose and resistant starch (RS) always show irregular morphology and special crystalline structure, but their formation during grain development is not yet clear. In our previous studies, we had generated a transgenic rice line (TRS) enriched with amylose and RS, which contained semi-compound starch showing a C-type crystalline structure. In this study, the formation of semi-compound C-type starch granule during TRS endosperm development was carefully investigated with light, scanning electron, and transmission electron microscopes and X-ray powder diffraction. The results showed that the TRS starch subgranules, each with a central hilum, were individually initiated in amyloplast and showed an A-type crystal at the early stage of starch granule development, which was similar to that in its wild type. However, with the endosperm development, the amylose content in TRS endosperm starch increased and the B-type starch crystal was deposited in the periphery of subgranules; then, the adjacent subgranules fused together and finally formed a continuous outer layer band surrounding the entire circumference of the starch granule. Accordingly, a mechanistic model for the formation of semi-compound C-type starch granules is proposed.

  3. Formation of inclusion complexes between high amylose starch and octadecyl ferulate via steam jet cooking

    Science.gov (United States)

    Amylose can form inclusion complexes with guest molecules and represents an interesting approach to deliver bioactive molecules. However, ferulic acid has been shown not to form single helical inclusion complexes with amylose. To overcome this problem a ferulic acid ester, octadecyl ferulate, posses...

  4. Properties of High Amylose Starch-Beeswax Inclusion Complexes Prepared by Steam Jet Cooking

    Science.gov (United States)

    Amylose is known to form inclusion complexes with a large number of polar and non-polar organic compounds including fatty acids. Amylose inclusion complexes are proposed to be employed as carrier for delivering ligands with desired functional properties in food and nutritional supplement products. ...

  5. Registration of Common Wheat Germplasm with Mutations in SBEII Genes Conferring Increased Grain Amylose and Resistant Starch Content

    OpenAIRE

    2016-01-01

    Starch present in the endosperm of common wheat (Triticum aestivum L.) grains is an important source of carbohydrates worldwide. Starches with a greater proportion of amylose have increased levels of resistant starch, a dietary fiber that can provide human health benefits. Induced mutations in STARCH BRANCHING ENZYME II (SBEII) genes in wheat are associated with increased amylose and resistant starch. Ethyl methane sulfonate mutations in SBEIIa and SBEIIb paralogs were combined in the hexaplo...

  6. Effect of simultaneous inhibition of starch branching enzymes I and IIb on the crystalline structure of rice starches with different amylose contents.

    Science.gov (United States)

    Man, Jianmin; Yang, Yang; Huang, Jun; Zhang, Changquan; Chen, Yifang; Wang, Youping; Gu, Minghong; Liu, Qiaoquan; Wei, Cunxu

    2013-10-16

    Mutating or inhibiting genes encoding starch branching enzymes (SBEs) can increase the amylose content (AC) of cereals. We analyzed endosperm starches from three rice cultivars with different ACs and from transgenic lines derived from them. The transgenic lines had simultaneously inhibited SBE I and IIb genes. Compared with the starch from their wild-type parents, the starch from transgenic lines showed significantly increased apparent ACs and lamella size and decreased relative crystallinity, double helix content, and lamellar peak scattering intensity, and altered short-range ordered structure in the external region. These changes were more prominent in the line derived from the high-AC cultivar than in those derived from waxy and low-AC cultivars. Inhibiting both SBE I and IIb changed the crystalline structure of starch from A-type to CA-type in lines derived from waxy and low-AC cultivars, and from A-type to C-type in that derived from the high-AC cultivar.

  7. Preparation of acetylated waxy, normal, and high-amylose maize starches with intermediate degrees of substitution in aqueous solution and their properties.

    Science.gov (United States)

    Luo, Zhi-Gang; Shi, Yong-Cheng

    2012-09-19

    Acetylated waxy, normal, and high-amylose maize starches with intermediate degrees of substitution (DS) were prepared in aqueous solution with 20% (w/w) sodium hydroxide as a catalyst. The level of DS was in the order high-amylose maize starch > waxy maize starch > normal maize starch. Settling volume indicated that during the early reaction, normal maize starch swelled to a lesser extent compared with waxy and high-amylose maize starches. The settling volume of all three starches increased initially but decreased after long reaction time. Aggregation of granules was observed as DS increased. The A-type X-ray diffraction pattern of acetylated normal and waxy maize starches weakened as DS increased, whereas the diffraction peaks disappeared in acetylated high-amylose starch when DS was 0.95. Low DS promoted the swelling of the starches in water, but at high DS, the starches became more hydrophobic and the peak viscosity of acetylated starches decreased.

  8. Effect of spray drying on the properties of amylose-hexadecylammonium chloride inclusion complexes.

    Science.gov (United States)

    Hay, William T; Behle, Robert W; Fanta, George F; Felker, Frederick C; Peterson, Steven C; Selling, Gordon W

    2017-02-10

    Water soluble amylose-hexadecyl ammonium chloride complexes were prepared from high amylose corn starch and hexadecyl ammonium chloride by excess steam jet cooking. Amylose inclusion complexes were spray dried to determine the viability of spray drying as a production method. The variables tested in the spray drying process were the% solids of the amylose-hexadecyl ammonium chloride complex being fed into the spray dryer, feed rate and the spray dryer outlet temperature. The amylose-inclusion complexes remained intact in all spray drying conditions tested as determined by X-ray diffraction. The rheological properties of solutions of the spray dried amylose-complexes remained unchanged when compared with the freeze dried control. Particle density and moisture content decreased with increased outlet temperature while particle size increased. X-ray diffraction and DSC analysis confirmed the formation of type II amylose inclusion complexes. Spray drying is a high throughput, low cost continuous commercial production method, which when coupled with excess steam jet cooking allows for the industrial scale production of cationic amylose-hexadecyl ammonium chloride complexes which may have value as flocculating and filtration enhancing agents and other aspects of paper production.

  9. Chemical profile, rumen degradation kinetics, and energy value of four hull-less barley cultivars: comparison of the zero-amylose waxy, waxy, high-amylose, and normal starch cultivars.

    Science.gov (United States)

    Damiran, Daalkhaijav; Yu, Peiqiang

    2010-10-13

    The objective of this study was to compare three new Canadian hull-less barley cultivars with altered starch characteristics (zero-amylose waxy, CDC Fibar; waxy, CDC Rattan; and high-amylose, HB08302) with conventional normal starch hull-less barley (HB) cultivar (CDC McGwire) in terms of ruminant feed value. The study revealed that altered starch HB cultivars possessed several desirable feed characteristics, distinct from conventional normal starch HB, although they were similar in some respects: (1) basic chemical and carbohydrate subfraction profiles varied; (2) starch degradation kinetics showed altered starch HB containing higher soluble starch, rumen undegraded starch, lower degradable starch, and slower degradation rate; (3) all altered starch HB cultivars had similar soluble and degradable starch, different from that of conventional normal starch HB; (4) two waxy HB cultivars were lower, whereas the high-amylose cultivar was similar in effective degradability of the starch as compared to conventional normal starch HB; (5) zero-amylose waxy HB had the greater effective degradability of protein among HB cultivars; and (6) amylopectin in HB had a positive relationship with protein supply (increasing amylopectin was correlated with increased effective degradability of protein). Overall, these results demonstrate that the alteration of starch structure in granule affects not only starch fermentation and utilization but also protein value in hull-less barley. In summary, the HB cultivars with modified starch might be a better feed grain for ruminants than the normal starch HB.

  10. High amylose resistant starch diet ameliorates oxidative stress, inflammation, and progression of chronic kidney disease.

    Directory of Open Access Journals (Sweden)

    Nosratola D Vaziri

    Full Text Available Inflammation is a major mediator of CKD progression and is partly driven by altered gut microbiome and intestinal barrier disruption, events which are caused by: urea influx in the intestine resulting in dominance of urease-possessing bacteria; disruption of epithelial barrier by urea-derived ammonia leading to endotoxemia and bacterial translocation; and restriction of potassium-rich fruits and vegetables which are common sources of fermentable fiber. Restriction of these foods leads to depletion of bacteria that convert indigestible carbohydrates to short chain fatty acids which are important nutrients for colonocytes and regulatory T lymphocytes. We hypothesized that a high resistant starch diet attenuates CKD progression. Male Sprague Dawley rats were fed a chow containing 0.7% adenine for 2 weeks to induce CKD. Rats were then fed diets supplemented with amylopectin (low-fiber control or high fermentable fiber (amylose maize resistant starch, HAM-RS2 for 3 weeks. CKD rats consuming low fiber diet exhibited reduced creatinine clearance, interstitial fibrosis, inflammation, tubular damage, activation of NFkB, upregulation of pro-inflammatory, pro-oxidant, and pro-fibrotic molecules; impaired Nrf2 activity, down-regulation of antioxidant enzymes, and disruption of colonic epithelial tight junction. The high resistant starch diet significantly attenuated these abnormalities. Thus high resistant starch diet retards CKD progression and attenuates oxidative stress and inflammation in rats. Future studies are needed to explore the impact of HAM-RS2 in CKD patients.

  11. Optimization of resistant starch formation from high amylose corn starch by microwave irradiation treatments and characterization of starch preparations.

    Science.gov (United States)

    Mutlu, Selime; Kahraman, Kevser; Öztürk, Serpil

    2017-02-01

    The effects of microwave irradiation on resistant starch (RS) formation and functional properties in high-amylose corn starch, Hylon VII, by applying microwave-storing cycles and drying processes were investigated. The Response Surface Methodology (RSM) was used to optimize the reaction conditions, microwave time (2-4min) and power (20-100%), for RS formation. The starch:water (1:10) mixtures were cooked and autoclaved and then different microwave-storing cycles and drying (oven or freeze drying) processes were applied. The RS contents of the samples increased with increasing microwave-storing cycle. The highest RS (43.4%) was obtained by oven drying after 3 cycles of microwave treatment at 20% power for 2min. The F, p (oven-dried samples applied by 1 and 3 cycles of microwave with regression coefficients of 0.65 and 0.62, respectively. Quadratic equation was obtained for freeze-dried samples applied by 3 cycles of microwave with a regression coefficient of 0.83. The solubility, water binding capacity (WBC) and RVA viscosity values of the microwave applied samples were higher than those of native Hylon VII. The WBC and viscosity values of the freeze-dried samples were higher than those of the oven-dried ones.

  12. In Vitro Utilization of Amylopectin and High-Amylose Maize (Amylomaize) Starch Granules by Human Colonic Bacteria

    OpenAIRE

    Wang, Xin; Conway, Patricia Lynne; Brown, Ian Lewis; Evans, Anthony John

    1999-01-01

    It has been well established that a certain amount of ingested starch can escape digestion in the human small intestine and consequently enters the large intestine, where it may serve as a carbon source for bacterial fermentation. Thirty-eight types of human colonic bacteria were screened for their capacity to utilize soluble starch, gelatinized amylopectin maize starch, and high-amylose maize starch granules by measuring the clear zones on starch agar plates. The six cultures which produced ...

  13. Retrogradation behaviour of high-amylose rice starch prepared by improved extrusion cooking technology.

    Science.gov (United States)

    Zhang, Yanjun; Liu, Wei; Liu, Chengmei; Luo, Shunjing; Li, Ti; Liu, Yunfei; Wu, Di; Zuo, Yanna

    2014-09-01

    Native rice starch (NRS, amylose/28.9%) was gelatinized by improved extrusion cooking technology (IECT) and retrograded (RRS) after low temperature storage (4 °C). The retrogradation behaviour of RRS was changed to low retrogradation percentage and low retrogradation rate. The retrogradation resulted in a high compact morphology. The melt enthalpy change and percentage of retrogradation of RRS was 3.68 J/g and 37.7%, respectively, compared to those of NRS (9.75 J/g, 100%). The retrogradation percentage for RRS was low during storage as shown as a low retrogradation rate (0.21 d(-1)) and a high Avrami exponent (0.89). The pattern of rice starch changed from A-type to amorphous and B-type. Both the relative crystallinity of RRS (12.7%) by the X-ray diffractograms and the ratio of the band height (0.63) in the FTIR spectra were low. The analysis of retrogradation structure and short-range molecular order further confirmed the retrogradation behaviour of rice starch after IECT treatment.

  14. Performance of high amylose starch-composited gelatin films influenced by gelatinization and concentration.

    Science.gov (United States)

    Wang, Wenhang; Wang, Kun; Xiao, Jingdong; Liu, Yaowei; Zhao, Yana; Liu, Anjun

    2017-01-01

    In order to study the impact of starch in film performance, high amylose corn starch was composited in gelatin films under different gelatinization conditions and, in high and low concentrations (10 and 50wt.%). It was found that hot water gelatinized starch (Gel-Shw) increased film mechanical strength and was dependent upon the starch concentration. The addition of an alkali component to the starch significantly enhanced the swelling of the starch granules and expedited the gelatinization process. Incorporation of starch, especially the alkalized starch (Sha), into the gelatin films decreased film solubility which improved its water resistance and water vapor permeability (WVP). Multiple techniques (DSC, TGA, FT-IR, and XRD) were used to characterize the process and results, including the crosslinking of the dissolved starch molecules and the particles formed from gelatinized starch during retrogradation process, which played an important role in improving the thermal stability of the composited gelatin films. Overall, the starch-gelatin composition provides a potential approach to improve gelatin film performance and benefit its applications in the food industry. Copyright © 2016 Elsevier B.V. All rights reserved.

  15. High-amylose sodium carboxymethyl starch matrices: development and characterization of tramadol hydrochloride sustained-release tablets for oral administration.

    Science.gov (United States)

    Nabais, Teresa; Leclair, Grégoire

    2014-01-01

    Substituted amylose (SA) polymers were produced from high-amylose corn starch by etherification of its hydroxyl groups with chloroacetate. Amorphous high-amylose sodium carboxymethyl starch (HASCA), the resulting SA polymer, was spray-dried to obtain an excipient (SD HASCA) with optimal binding and sustained-release (SR) properties. Tablets containing different percentages of SD HASCA and tramadol hydrochloride were produced by direct compression and evaluated for dissolution. Once-daily and twice-daily SD HASCA tablets containing two common dosages of tramadol hydrochloride (100 mg and 200 mg), a freely water-soluble drug, were successfully developed. These SR formulations presented high crushing forces, which facilitate further tablet processing and handling. When exposed to both a pH gradient simulating the pH variations through the gastrointestinal tract and a 40% ethanol medium, a very rigid gel formed progressively at the surface of the tablets providing controlled drug-release properties. These properties indicated that SD HASCA was a promising and robust excipient for oral, sustained drug-release, which may possibly minimize the likelihood of dose dumping and consequent adverse effects, even in the case of coadministration with alcohol.

  16. Association mapping of starch chain length distribution and amylose content in pea (Pisum sativum L.) using carbohydrate metabolism candidate genes.

    Science.gov (United States)

    Carpenter, Margaret A; Shaw, Martin; Cooper, Rebecca D; Frew, Tonya J; Butler, Ruth C; Murray, Sarah R; Moya, Leire; Coyne, Clarice J; Timmerman-Vaughan, Gail M

    2017-08-01

    Although starch consists of large macromolecules composed of glucose units linked by α-1,4-glycosidic linkages with α-1,6-glycosidic branchpoints, variation in starch structural and functional properties is found both within and between species. Interest in starch genetics is based on the importance of starch in food and industrial processes, with the potential of genetics to provide novel starches. The starch metabolic pathway is complex but has been characterized in diverse plant species, including pea. To understand how allelic variation in the pea starch metabolic pathway affects starch structure and percent amylose, partial sequences of 25 candidate genes were characterized for polymorphisms using a panel of 92 diverse pea lines. Variation in the percent amylose composition of extracted seed starch and (amylopectin) chain length distribution, one measure of starch structure, were characterized for these lines. Association mapping was undertaken to identify polymorphisms associated with the variation in starch chain length distribution and percent amylose, using a mixed linear model that incorporated population structure and kinship. Associations were found for polymorphisms in seven candidate genes plus Mendel's r locus (which conditions the round versus wrinkled seed phenotype). The genes with associated polymorphisms are involved in the substrate supply, chain elongation and branching stages of the pea carbohydrate and starch metabolic pathways. The association of polymorphisms in carbohydrate and starch metabolic genes with variation in amylopectin chain length distribution and percent amylose may help to guide manipulation of pea seed starch structural and functional properties through plant breeding.

  17. Genetic dissection of grain beta-glucan and amylose content in barley (Hordeum vulgare L.)

    Science.gov (United States)

    High beta glucan (BG) barleys (Hordeum vulgare L.) have major potential as food ingredients due to the well know health benefits. Quantitative trait loci (QTLs) associated with BG have been reported in hulled barley, however no QTL studies have been reported in hulless barley. In this study, QTL an...

  18. Concerted suppression of all starch branching enzyme genes in barley produces amylose-only starch granules

    DEFF Research Database (Denmark)

    Carciofi, Massimiliano; Blennow, Per Gunnar Andreas; Jensen, Susanne Langgård;

    2012-01-01

    Background Starch is stored in higher plants as granules composed of semi-crystalline amylopectin and amorphous amylose. Starch granules provide energy for the plant during dark periods and for germination of seeds and tubers. Dietary starch is also a highly glycemic carbohydrate being degraded...... is preferentially derived from amylose, which can be increased by suppressing amylopectin synthesis by silencing of starch branching enzymes (SBEs). However all the previous works attempting the production of high RS crops resulted in only partly increased amylose-content and/or significant yield loss. Results...... In this study we invented a new method for silencing of multiple genes. Using a chimeric RNAi hairpin we simultaneously suppressed all genes coding for starch branching enzymes (SBE I, SBE IIa, SBE IIb) in barley (Hordeum vulgare L.), resulting in production of amylose-only starch granules in the endosperm...

  19. Insights into the swelling process and drug release mechanisms from cross-linked pectin/high amylose starch matrices

    Directory of Open Access Journals (Sweden)

    Fernanda M. Carbinatto

    2014-02-01

    Full Text Available Cross-linked pectin/high amylose mixtures were evaluated as a new excipient for matrix tablets formulations, since the mixing of polymers and cross-linking reaction represent rational tools to reach materials with modulated and specific properties that meet specific therapeutic needs. Objective: In this work the influence of polymer ratio and cross-linking process on the swelling and the mechanism driving the drug release from swellable matrix tablets prepared with this excipient was investigated. Methods: Cross-linked samples were characterized by their micromeritic properties (size and shape, density, angle of repose and flow rate and liquid uptake ability. Matrix tablets were evaluated according their physical properties and the drug release rates and mechanisms were also investigated. Results: Cross-linked samples demonstrated size homogeneity and irregular shape, with liquid uptake ability insensible to pH. Cross-linking process of samples allowed the control of drug release rates and the drug release mechanism was influenced by both polymer ratio and cross-linking process. The drug release of samples with minor proportion of pectin was driven by an anomalous transport and the increase of the pectin proportion contributed to the erosion of the matrix. Conclusion: The cross-linked mixtures of high amylose and pectin showed a suitable excipient for slowing the drug release rates.

  20. C-type starch from high-amylose rice resistant starch granules modified by antisense RNA inhibition of starch branching enzyme.

    Science.gov (United States)

    Wei, Cunxu; Xu, Bin; Qin, Fengling; Yu, Huaguang; Chen, Chong; Meng, Xianglen; Zhu, Lijia; Wang, Youping; Gu, Minghong; Liu, Qiaoquan

    2010-06-23

    High-amylose starch is a source of resistant starch (RS) which has a great benefit on human health. A transgenic rice line (TRS) enriched amylose and RS had been developed by antisense RNA inhibition of starch branching enzymes. In this study, the native starch granules were isolated from TRS grains as well as the wild type, and their crystalline type was carefully investigated before and after acid hydrolysis. In high-amylose TRS rice, the C-type starch, which might result from the combination of both A-type and B-type starch, was observed and subsequently confirmed by multiple physical techniques, including X-ray powder diffraction, solid-state nuclear magnetic resonance, and Fourier transform infrared. Moreover, the change of starch crystalline structure from C- to B-type during acid hydrolysis was also observed in this RS-rich rice. These data could add to our understanding of not only the polymorph structure of cereal starch but also why high-amylose starch is more resistant to digestion.

  1. Inclusion complexation of flavour compounds by dispersed high-amylose maize starch (HAMS) in an aqueous model system.

    Science.gov (United States)

    Yeo, Lihe; Thompson, Donald B; Peterson, Devin G

    2016-05-15

    This study investigated how hydrophobicity, solubility and the concentration of flavour compounds related to inclusion complexation by dispersed native high amylose maize starch (HAMS). The effect of native lipid on flavour retention and the effect of time (one day to one month) on flavour retention and precipitated starch yield was also examined. Flavour-starch complexation was dependent on the flavour compound hydrophobicity, the flavour concentration in a dose-dependent manner and also influenced by time (increased during storage). Flavour composition also influenced starch complexation; no flavour complexes were reported with limonene by itself but were observed when added in binary flavour mixtures with menthone or thymol. Furthermore, no difference in flavour retention was observed for native and lipid-free starch dispersions. In summary, flavour inclusion complexes with HAMS exhibited cooperativity-type binding behaviour; with a critical ligand concentration needed for a stable physical association between flavour compounds and HAMS.

  2. Comparison of Near Infrared Spectroscopy Models for Determining Protein and Amylose Contents Between Calibration Samples of Recombinant Inbred Lines and Conventional Varieties of Rice

    Institute of Scientific and Technical Information of China (English)

    ZHANG Hong-jiang; WU Jin-hong; LUO Li-jun; LI Ying; YANG Hua; YU Xin-qiao; WANG Xiao-shan; CHEN Liang; MEI Han-wei

    2007-01-01

    The near infrared spectra of 178 recombinant inbred lines (RILs) from the cross of Ⅱ-32B/Yuezaoxian 6 (YZX6) and 511 varieties in rice were acquired. A total of 80 RILs and 96 cultivars were selected as modeling samples by comparing the spectra similarity primarily. Three partial least square (PLS) regression models were developed, based on the RILs (RIL-model), the varieties (Var-model) and their mixture (Mix-model), for protein content (PC) and amylose content (AC),respectively. Cross validation and outer prediction showed that the models were largely influenced by the range and distribution of modeling samples. The regression model of PC based on the cultivars and the model of AC based on RILs had higher coefficient of determination (r2 ≥ 0.9) and lower root mean square error of cross validation (RMSECVs). The disadvantages of RIL samples for PC model and variety samples for AC model were probably caused by the narrow range of variance. Aberrant predictions were obtained for outer sample with PC or AC outside the range or within the distribution gap of modeling samples. The Mix-models gave more reliable prediction as the distribution of RIL and variety modeling samples were complementary to each other.

  3. Physical Characterization Of High Amylose/Pectin Mixtures Cross-Linked With Sodium Trimetaphosphate; Caracterizacao fisica de misturas alta amilose/pectina reticuladas com trimetafosfato de sodio

    Energy Technology Data Exchange (ETDEWEB)

    Carbinatto, F.M.; Cury, B.S.F.; Evangelista, R.C., E-mail: curybsf@fcfar.unesp.b [UNESP, Araraquara, SP (Brazil). Fac. de Ciencias Farmaceuticas

    2010-07-01

    Some researches have reported that pectin and high amylose mixtures presented superior mechanical properties in relation to those of the isolated polymers. In this work, mixtures at different ratios (1:4; 1:1) of pectin and high amylose were crosslinked with sodium trimetaphosphate at different degrees by varying reaction conditions. All samples were characterized by rheological and X-ray diffraction analyses. Samples without cross-linker were prepared as control. The oscillatory dynamic tests showed that all samples exhibited predominant elastic behavior, although cross-linked samples presented higher G' values, suggesting that crosslinking by phosphorylation resulted in more strength structures. The diffractograms showed that cross-linked samples underwent structural modifications that resulted in increase of crystallinity due to cross-linking process. (author)

  4. Effect of the water content on the retention and enantioselectivity of albendazole and fenbendazole sulfoxides using amylose-based chiral stationary phases in organic-aqueous conditions.

    Science.gov (United States)

    Materazzo, Sabrina; Carradori, Simone; Ferretti, Rosella; Gallinella, Bruno; Secci, Daniela; Cirilli, Roberto

    2014-01-31

    Four commercially available immobilized amylose-derived CSPs (Chiralpak IA-3, Chiralpak ID-3, Chiralpak IE-3 and Chiralpak IF-3) were used in the HPLC analysis of the chiral sulfoxides albendazole (ABZ-SO) and fenbendazole (FBZ-SO) and their in vivo sulfide precursor (ABZ and FBZ) and sulfone metabolite (ABZ-SO2 and FBZ-SO2) under organic-aqueous mode. U-shape retention maps, established by varying the water content in the acetonitrile- and ethanol-water mobile phases, were indicative of two retention mechanisms operating on the same CSP. The dual retention behavior of polysaccharide-based CSPs was exploited to design greener enantioselective and chemoselective separations in a short time frame. The enantiomers of ABZ-SO and FBZ-SO were baseline resolved with water-rich mobile phases (with the main component usually being 50-65% water in acetonitrile) on the IF-3 CSP and ethanol-water 100:5 mixture on the IA-3 and IE-3 CSPs. A simultaneous separation of ABZ (or FBZ), enantiomers of the corresponding sulfoxide and sulfone was achieved on the IA-3 using ethanol-water 100:60 (acetonitrile-water 100:100 for FBZ) as a mobile phase.

  5. Characterization of modified high-amylose maize starch-α-naphthol complexes and their influence on rheological properties of wheat starch.

    Science.gov (United States)

    Zhu, Fan; Wang, Ya-Jane

    2013-05-01

    Amylose can form inclusion complexes with diverse small molecules. Modified starch has different and unique properties compared with its native counterpart. In this study, chemically/enzymatically modified high-amylose maize starches were used to make inclusion complexes with α-naphthol, and the physical properties of complexes and their influences on the rheology of wheat starch were characterized. The results showed that modification of starch had little influence on the wide angle X-ray diffraction pattern of complex (eightfold single helix), but did so on the complexation index and precipitation yield. Inclusion complexes with chemically modified starch showed a lower range of thermostability and recrystallization temperatures. Addition of complex considerably influenced the rheological properties of wheat starch, and the effect was dependent on the type of modified starch used. It may be concluded that starch inclusion complexes, with a range of properties and potential food applications, may be feasibly prepared by using diverse modified high-amylose maize starches. Copyright © 2012 Elsevier Ltd. All rights reserved.

  6. Increased Butyrate Production During Long-Term Fermentation of In Vitro-Digested High Amylose Cornstarch Residues with Human Feces.

    Science.gov (United States)

    Li, Li; Jiang, Hongxin; Kim, Hyun-Jung; Yum, Man-Yu; Campbell, Mark R; Jane, Jay-Lin; White, Pamela J; Hendrich, Suzanne

    2015-09-01

    An in vitro semi-continuous long-term (3 wk) anaerobic incubation system simulating lower gut fermentation was used to determine variability in gut microbial metabolism between 4 predigested high amylose-resistant starch residues (SR): SRV, SRVI, SRVII, and SRGEMS in human fecal samples. Subjects participated twice, 5 mo apart: 30 in Phase I (15 lean, 9 overweight and 6 obese), 29 in Phase II (15 lean, 9 overweight, 5 obese); 13 of 15 lean subjects participated in both phases. Of the 4 SRs, SRV displayed the highest gelatinization temperature, peak temperature, enthalpy changes, and the least digestibility compared with the other SRs. In both phases, compared with blank controls, all SRs increased butyrate ∼2-fold which stabilized at week 2 and only SRV caused greater propionate concentration (∼30%) after 3 wk which might have been partly mediated by its lesser digestibility. Fecal samples from lean and overweight/obese subjects incubated with SRs showed similar short-chain fatty acid production across both time points, which suggests that resistant starch may benefit individuals across BMIs.

  7. High performance liquid chromatographic separation of eight drugs collected in Chinese Pharmacopoeia 2010 on amylose ramification chiral stationary phase

    Directory of Open Access Journals (Sweden)

    Yan Wang

    2012-10-01

    Full Text Available The enantiomers separation of eight pharmaceutical racemates collected in Chinese Pharmacopoeia 2010 (Ch.P2010, including nitrendipine, felodipine, omeprazole, praziquantel, sulpiride, clenbuterol hydrochloride, verapamil hydrochloride and chlorphenamine maleate, was performed on chiral stationary phase of amylose ramification by high performance liquid chromatography (HPLC on Chiralpak AD-H column and Chiralpak AS-H column with the mobile phase consisted of isopropanol and n-hexane. The detection wavelength and the flow rate were set at 254 nm and 0.7 mL/min, respectively. The effects of proportion of organic additives, alcohol displacer and temperature on the separation were investigated. The results indicated that eight chiral drugs were separated on chiral stationary phase of amylase ramification in normal phase chromatographic system. The chromatographic retention and resolution of enantiomers were adjusted by factors, including the changes of the concentration of alcohol displacer in mobile phase, organic alkaline modifier and column temperature. It was shown that the resolution was improved with reducing concentration of alcohol displacer. When the concentration of organic alkaline modifier was 0.2%, the resolution and the peak shape were fairly good. Most racemates mentioned above had the best resolution at column temperature of 25 °C. The best temperature should be kept unchanged in the process of separation so as to obtain stable separation results.

  8. Concerted suppression of all starch branching enzyme genes in barley produces amylose-only starch granules

    DEFF Research Database (Denmark)

    Carciofi, Massimiliano; Blennow, Per Gunnar Andreas; Jensen, Susanne Langgård;

    2012-01-01

    Background Starch is stored in higher plants as granules composed of semi-crystalline amylopectin and amorphous amylose. Starch granules provide energy for the plant during dark periods and for germination of seeds and tubers. Dietary starch is also a highly glycemic carbohydrate being degraded...... to glucose and rapidly absorbed in the small intestine. But a portion of dietary starch, termed "resistant starch" (RS) escapes digestion and reaches the large intestine, where it is fermented by colonic bacteria producing short chain fatty acids (SCFA) which are linked to several health benefits. The RS...... is preferentially derived from amylose, which can be increased by suppressing amylopectin synthesis by silencing of starch branching enzymes (SBEs). However all the previous works attempting the production of high RS crops resulted in only partly increased amylose-content and/or significant yield loss. Results...

  9. Dissecting the genetic basis for the effect of rice chalkiness, amylose content, protein content, and rapid viscosity analyzer profile characteristics on the eating quality of cooked rice using the chromosome segment substitution line population across eight environments.

    Science.gov (United States)

    Liu, Xiaolu; Wan, Xiangyuan; Ma, Xiaodong; Wan, Jianmin

    2011-01-01

    Quantitative trait locus (QTL) mapping and stability analysis were carried out for 16 rice (Oryza sativa L.) quality traits across eight environments, by using a set of chromosome segment substitution lines with 'Asominori' as genetic background. The 16 quality traits include percentage of grain with chalkiness (PGWC), area of chalky endosperm (ACE), amylose content (AC), protein content (PC), peak viscosity, hot paste viscosity, cool paste viscosity, breakdown viscosity (BDV), setback viscosity (SBV), consistency viscosity, cooked-rice luster (LT), scent, tenderness (TD), viscosity, elasticity, and the integrated values of organleptic evaluation (IVOE). A total of 132 additive effect QTLs are detected for the 16 quality straits in the eight environments. Among these QTLs, 56 loci were detected repeatedly in at least three environments. Interestingly, several QTL clusters were observed for multiple quality traits. Especially, one QTL cluster near the G1149 marker on chromosome 8 includes nine QTLs: qPGWC-8, qACE-8, qAC-8, qPC-8a, qBDV-8a, qSBV-8b, qLT-8a, qTD-8a, and qIVOE-8a, which control PGWC, ACE, AC, PC, BDV, SBV, LT, TD, and IVOE, respectively. Moreover, this QTL cluster shows high stability and repeatability in all eight environments. In addition, one QTL cluster was located near the C2340 marker on chromosome 1 and another was detected near the XNpb67 marker on chromosome 2; each cluster contained five loci. Near the C563 marker on chromosome 3, one QTL cluster with four loci was found. Also, there were nine QTL clusters that each had two or three loci; however, their repeatability in different environments was relatively lower, and the genetic contribution rate was relatively smaller. Considering the correlations among all of the 16 quality traits with QTL cluster distributions, we can conclude that the stable and major QTL cluster on chromosome 8 is the main genetic basis for the effect of rice chalkiness, AC, PC, and rapid viscosity analyzer profile

  10. Spray-dried high-amylose sodium carboxymethyl starch: impact of α-amylase on drug-release profile.

    Science.gov (United States)

    Nabais, Teresa; Zaraa, Sarra; Leclair, Grégoire

    2016-11-01

    Spray-dried high-amylose sodium carboxymethyl starch (SD HASCA) is a promising pharmaceutical excipient for sustained-release (SR) matrix tablets produced by direct compression. The presence of α-amylase in the gastrointestinal tract and the variations of the gastric residence time of non-disintegrating dosage forms may affect the presystemic metabolism of this excipient and, consequently, the drug-release profile from formulations produced with SD HASCA. In this study, the influence of α-amylase and the residence time in acidic conditions on the drug-release profile was evaluated for a once-daily acetaminophen formulation (Acetaminophen SR) and a once-daily tramadol hydrochloride formulation (Tramadol SR). Both formulations were based on SD HASCA. α-Amylase concentrations ranging from 0 IU/L to 20000 IU/L did not significantly affect the drug-release profiles of acetaminophen and tramadol hydrochloride from SD HASCA tablets (f2 > 50) for all but only one of the studied conditions (f2 = 47). Moreover, the drug-release properties from both SD HASCA formulations were not significantly different when the residence time in acidic medium was 1 h or 3 h. An increase in α-amylase concentration led to an increase in the importance of polymer erosion as the main mechanism of drug-release instead of drug diffusion, for both formulations and both residence times, even if release profiles remained comparable. As such, it is expected that α-amylase concentration and residence time in the stomach will not clinically affect the performance of both SD HASCA SR formulations, even if the mechanism of release itself may be affected.

  11. Concerted suppression of all starch branching enzyme genes in barley produces amylose-only starch granules

    Science.gov (United States)

    2012-01-01

    Background Starch is stored in higher plants as granules composed of semi-crystalline amylopectin and amorphous amylose. Starch granules provide energy for the plant during dark periods and for germination of seeds and tubers. Dietary starch is also a highly glycemic carbohydrate being degraded to glucose and rapidly absorbed in the small intestine. But a portion of dietary starch, termed “resistant starch” (RS) escapes digestion and reaches the large intestine, where it is fermented by colonic bacteria producing short chain fatty acids (SCFA) which are linked to several health benefits. The RS is preferentially derived from amylose, which can be increased by suppressing amylopectin synthesis by silencing of starch branching enzymes (SBEs). However all the previous works attempting the production of high RS crops resulted in only partly increased amylose-content and/or significant yield loss. Results In this study we invented a new method for silencing of multiple genes. Using a chimeric RNAi hairpin we simultaneously suppressed all genes coding for starch branching enzymes (SBE I, SBE IIa, SBE IIb) in barley (Hordeum vulgare L.), resulting in production of amylose-only starch granules in the endosperm. This trait was segregating 3:1. Amylose-only starch granules were irregularly shaped and showed peculiar thermal properties and crystallinity. Transgenic lines retained high-yield possibly due to a pleiotropic upregualtion of other starch biosynthetic genes compensating the SBEs loss. For gelatinized starch, a very high content of RS (65 %) was observed, which is 2.2-fold higher than control (29%). The amylose-only grains germinated with same frequency as control grains. However, initial growth was delayed in young plants. Conclusions This is the first time that pure amylose has been generated with high yield in a living organism. This was achieved by a new method of simultaneous suppression of the entire complement of genes encoding starch branching enzymes. We

  12. Concerted suppression of all starch branching enzyme genes in barley produces amylose-only starch granules

    Directory of Open Access Journals (Sweden)

    Carciofi Massimiliano

    2012-11-01

    Full Text Available Abstract Background Starch is stored in higher plants as granules composed of semi-crystalline amylopectin and amorphous amylose. Starch granules provide energy for the plant during dark periods and for germination of seeds and tubers. Dietary starch is also a highly glycemic carbohydrate being degraded to glucose and rapidly absorbed in the small intestine. But a portion of dietary starch, termed “resistant starch” (RS escapes digestion and reaches the large intestine, where it is fermented by colonic bacteria producing short chain fatty acids (SCFA which are linked to several health benefits. The RS is preferentially derived from amylose, which can be increased by suppressing amylopectin synthesis by silencing of starch branching enzymes (SBEs. However all the previous works attempting the production of high RS crops resulted in only partly increased amylose-content and/or significant yield loss. Results In this study we invented a new method for silencing of multiple genes. Using a chimeric RNAi hairpin we simultaneously suppressed all genes coding for starch branching enzymes (SBE I, SBE IIa, SBE IIb in barley (Hordeum vulgare L., resulting in production of amylose-only starch granules in the endosperm. This trait was segregating 3:1. Amylose-only starch granules were irregularly shaped and showed peculiar thermal properties and crystallinity. Transgenic lines retained high-yield possibly due to a pleiotropic upregualtion of other starch biosynthetic genes compensating the SBEs loss. For gelatinized starch, a very high content of RS (65 % was observed, which is 2.2-fold higher than control (29%. The amylose-only grains germinated with same frequency as control grains. However, initial growth was delayed in young plants. Conclusions This is the first time that pure amylose has been generated with high yield in a living organism. This was achieved by a new method of simultaneous suppression of the entire complement of genes encoding starch

  13. Dietary butyrylated high-amylose starch reduces azoxymethane-induced colonic O(6)-methylguanine adducts in rats as measured by immunohistochemistry and high-pressure liquid chromatography.

    Science.gov (United States)

    Le Leu, Richard K; Scherer, Benjamin L; Mano, Mark T; Winter, Jean M; Lannagan, Tamsin; Head, Richard J; Lockett, Trevor; Clarke, Julie M

    2016-09-01

    O(6)-methyl guanine (O(6)MeG) adducts are major toxic, promutagenic, and procarcinogenic adducts involved in colorectal carcinogenesis. Resistant starch and its colonic metabolite butyrate are known to protect against oncogenesis in the colon. In this study, we hypothesized that a dietary intervention that specifically delivers butyrate to the large bowel (notably butyrylated high-amylose maize starch [HAMSB]) would reduce colonic levels of O(6)MeG in rats shortly after exposure to the deoxyribonucleic acid (DNA) alkylating agent azoxymethane (AOM) when compared with a low-amylose maize starch (LAMS). A further objective was to validate an immunohistochemistry (IHC) method for quantifying O(6)MeG against a high-performance liquid chromatography method using fluorescence and diode array detection. Rats were fed either LAMS or HAMSB diets for 4 weeks followed by a single injection of AOM or saline and killed 6 hours later. After AOM exposure, both IHC and high-performance liquid chromatography method using fluorescence and diode array detection measured a substantially increased quantity of DNA adducts in the colon (Preducing colonic adduct load compared with the LAMS diet (Pload was reduced in the lower third of the crypt compartment in HAMSB-fed rats (P=.036). The apoptotic response to AOM was higher in the HAMSB-fed rats (P=.002). In conclusion, the reduction in O(6)MeG levels and enhancement of the apoptotic response to DNA damage in the colonic epithelium through consumption of HAMSB provide mechanistic insights into how HAMSB protects against colorectal tumorigenesis. Copyright © 2016 Elsevier Inc. All rights reserved.

  14. Lipid partitioning in maize (Zea mays L.) endosperm highlights relationships among starch lipids, amylose, and vitreousness.

    Science.gov (United States)

    Gayral, Mathieu; Bakan, Bénédicte; Dalgalarrondo, Michele; Elmorjani, Khalil; Delluc, Caroline; Brunet, Sylvie; Linossier, Laurent; Morel, Marie-Hélène; Marion, Didier

    2015-04-08

    Content and composition of maize endosperm lipids and their partition in the floury and vitreous regions were determined for a set of inbred lines. Neutral lipids, i.e., triglycerides and free fatty acids, accounted for more than 80% of endosperm lipids and are almost 2 times higher in the floury than in the vitreous regions. The composition of endosperm lipids, including their fatty acid unsaturation levels, as well as their distribution may be related to metabolic specificities of the floury and vitreous regions in carbon and nitrogen storage and to the management of stress responses during endosperm cell development. Remarkably, the highest contents of starch lipids were observed systematically within the vitreous endosperm. These high amounts of starch lipids were mainly due to lysophosphatidylcholine and were tightly linked to the highest amylose content. Consequently, the formation of amylose-lysophosphatidylcholine complexes has to be considered as an outstanding mechanism affecting endosperm vitreousness.

  15. Relationship between Polymorphism of Wx Gene and Amylose Content in Hulless Barley%青稞Wx基因多态性与直链淀粉含量的关系

    Institute of Scientific and Technical Information of China (English)

    吴昆仑; 赵媛; 迟德钊

    2012-01-01

    Hulless barley (Hordeum vulgare L. Var. Nudum Hook, f.) is a typical crop in Tibetan Plateau in China. Starch, including amylopectin and amylose, is the main storage component in hulless barley, of which amylose is in low content or even absent in the endosperm of waxy barley. The Waxy gene (Wx) located on the short arm of chromosome 7H is a key gene responsible for amylose synthesis, and also acts as a favorable gene in breeding of hulless barley. However, it is difficult to select hulless barley germplasm with Wx due to lack of effective molecular markers. This study aimed to find out molecular markers applicable in the, identification of Wx gene. A total of 150 accessions of hulless barley were primarily tested by staining endosperm with I2-KI, and four accessions (IG107028, Puebla, Huzhushuangcaoren, and APM-HC1905) were found as waxy genotypes. The amylose contents (AC) of the 150 accessions, which were measured using dual-wave length spectrophotometry method, varied from 12.4% to 38.5% with an average of 26.0%. The amylose contents of the four waxy genotypes namely IG107028, Brachvtic, Kunlun 2, and Huzhushuangcaoren, were 12.4-18.6% with an average of 16.7%. No genotype without amylase was found. We selected 51 accessions with obvious difference in AC to validate the polymorphism of four pairs of SSR markers. Primers PI and P3 showed no polymorphism among the 51 accessions, and primer P4 exhibited four types of amplified product, and the fragment size positively correlated with amylose content. The P4 primer was designed according to the sequence of Wx gene on chromosome 7H of barley. Primer P4 can be used as an effective marker for selecting waxy hulless barley cultivars.%以150份青稞品种为材料,采用碘-碘化钾染色法进行表型鉴定,筛选出含糯性基因型的4份参试材料,分别是品种IG107028、Puebla、互助双槽人和APM-HC 1905.经双波长法测定,150份参试材料的直链淀粉含量(AC)为12.4%~38.5%,平均26.0

  16. Vibrational dynamics of hydration water in amylose

    CERN Document Server

    Cavatorta, F; Albanese, G; Angelini, N

    2002-01-01

    We present a study of the dynamical properties of hydration water associated with amylose helices, based on low-temperature vibrational spectra collected using the TOSCA inelastic spectrometer at ISIS. The structural constraints of the polysaccharidic chains favour the formation of a high-density structure for water, which has been suggested by Imberty and Perez on the basis of conformational analysis. According to this model, hydration water can only enter the pores formed by six adjacent helices and completely fills the pores at a hydration level of about 0.27-g water/g dry amylose. Our measurements show that the dynamical behaviour of hydration water is similar to that observed in high-density amorphous ice. (orig.)

  17. Effect of temperature and heating duration of drying on quality of low amylose rice

    Directory of Open Access Journals (Sweden)

    Jutarop Yardthaisong

    2014-03-01

    Full Text Available Processed food is mostly made from stale rice which contains high viscosity. However the storage of stale rice takes approximately 4-6 months, so acceleration aging of rice saves time and area in the warehouse. Therefore the study aims to observe effects of temperatures and heating duration on the quality of rice with initial low-amylose. Optimum temperature and heating duration of rice quality similar to stale rice were analyzed. The Khao Dok Mali 105 has been tested under controlled temperatures at 70, 80 and 90 °C with heating duration for 2, 4, 6 and 8 hours. The results showed that final viscosity, color value, amylose content and grain cracking increased, but Breakdown decreased as temperature, heating duration and storage time increased. The optimum temperature at 90 °C and heating duration for 4 hours affected to rice quality in the experiment similar to stale rice after storage for 4 months.

  18. The effects of whole grain high-amylose maize flour as a source of resistant starch on blood glucose, satiety, and food intake in young men.

    Science.gov (United States)

    Luhovyy, Bohdan L; Mollard, Rebecca C; Yurchenko, Svitlana; Nunez, Maria Fernanda; Berengut, Shari; Liu, Ting Ting; Smith, Christopher E; Pelkman, Christine L; Anderson, G Harvey

    2014-12-01

    The objective of this study was to determine the dose response effect of whole grain high-amylose maize (HAM) flour as a source of resistant starch (RS) on blood glucose, appetite and short-term food intake. In a repeated-measures crossover trial, healthy men (n = 30, 22.9 ± 0.6 y, BMI of 22.6 ± 0.3 kg/m(2)) were randomly assigned to consume 1 of 3 cookies once a week for 3 wk. Cookies were control (100% wheat flour), low-dose (63% wheat flour,37% HAM flour), and high-dose (33% wheat flour, 67% HAM flour) providing 53.5, 43.5, and 36.3 g of available carbohydrate, respectively. Ad libitum food intake was measured 120 min at a pizza meal, blood glucose and subjective appetite were measured after consumption of the cookie (0 to 120 min) and after the pizza meal (140 to 200 min). Blood glucose concentrations were lower at 30 and 45 min after high-dose treatment, and at 120 min after both high- and low-dose treatments compared to control (P < 0.05). Blood glucose AUC before the pizza meal (0 to 120 min) was 44% and 14% lower, and higher by 43% and 41% after the pizza meal (140 to 200 min) compared with control. Yet despite the higher response following the meal, cumulative AUC (0 to 200 min) was still 22% lower after the high-dose treatment (P < 0.05). All treatments equally suppressed subjective appetite and there was no effect on food intake. In conclusion, HAM flour as a source of RS and incorporated into a cookie was associated with better glycemic control in young men.

  19. Increased water resistance of paper treated with amylose-fatty ammonium salt inclusion complexes

    Science.gov (United States)

    Amylose inclusion complexes were prepared from high amylose corn starch and the HCl salts of hexadecylamine and octadecylamine. Solutions of the complexes were applied to paper at concentrations of 2-4%. After the treated papers were dried, sodium hydroxide solution was applied to convert the adsorb...

  20. Granule structure and distribution of allomorphs in C-type high-amylose rice starch granule modified by antisense RNA inhibition of starch branching enzyme.

    Science.gov (United States)

    Wei, Cunxu; Qin, Fengling; Zhou, Weidong; Yu, Huaguang; Xu, Bin; Chen, Chong; Zhu, Lijia; Wang, Youping; Gu, Minghong; Liu, Qiaoquan

    2010-11-24

    C-type starch, which is a combination of both A-type and B-type crystal starch, is usually found in legumes and rhizomes. We have developed a high-amylose transgenic line of rice (TRS) by antisense RNA inhibition of starch branching enzymes. The starch in the endosperm of this TRS was identified as typical C-type crystalline starch, but its fine granular structure and allomorph distribution remained unclear. In this study, we conducted morphological and spectroscopic studies on this TRS starch during acid hydrolysis to determine the distribution of A- and B-type allomorphs. The morphology of starch granules after various durations of acid hydrolysis was compared by optical microscopy, scanning electron microscopy, and transmission electron microscopy. The results showed that amorphous regions were located at the center part of TRS starch subgranules. During acid hydrolysis, starch was degraded from the interior of the subgranule to the outer surface, while the peripheral part of the subgranules and the surrounding band of the starch granule were highly resistant to acid hydrolysis. The spectroscopic changes detected by X-ray powder diffraction, 13C cross-polarization magic-angle spinning NMR, and attenuated total reflectance Fourier transform infrared showed that the A-type allomorph was hydrolyzed more rapidly than the B-type, and that the X-ray diffraction profile gradually changed from a native C-type to a CB-type with increasing hydrolysis time. Our results showed that, in TRS starch, the A-type allomorph was located around the amorphous region, and was surrounded by the B-type allomorph located in the peripheral region of the subgranules and the surrounding band of the starch granule. Thus, the positions of A- and B-type allomorphs in the TRS C-type starch granule differ markedly from those in C-type legume and rhizome starch.

  1. Molecular insights into how a deficiency of amylose affects carbon allocation – carbohydrate and oil analyses and gene expression profiling in the seeds of a rice waxy mutant

    Directory of Open Access Journals (Sweden)

    Zhang Ming-Zhou

    2012-12-01

    Full Text Available Abstract Background Understanding carbon partitioning in cereal seeds is of critical importance to develop cereal crops with enhanced starch yields for food security and for producing specified end-products high in amylose, β-glucan, or fructan, such as functional foods or oils for biofuel applications. Waxy mutants of cereals have a high content of amylopectin and have been well characterized. However, the allocation of carbon to other components, such as β-glucan and oils, and the regulation of the altered carbon distribution to amylopectin in a waxy mutant are poorly understood. In this study, we used a rice mutant, GM077, with a low content of amylose to gain molecular insight into how a deficiency of amylose affects carbon allocation to other end products and to amylopectin. We used carbohydrate analysis, subtractive cDNA libraries, and qPCR to identify candidate genes potentially responsible for the changes in carbon allocation in GM077 seeds. Results Carbohydrate analysis indicated that the content of amylose in GM077 seeds was significantly reduced, while that of amylopectin significantly rose as compared to the wild type BP034. The content of glucose, sucrose, total starch, cell-wall polysaccharides and oil were only slightly affected in the mutant as compared to the wild type. Suppression subtractive hybridization (SSH experiments generated 116 unigenes in the mutant on the wild-type background. Among the 116 unigenes, three, AGP, ISA1 and SUSIBA2-like, were found to be directly involved in amylopectin synthesis, indicating their possible roles in redirecting carbon flux from amylose to amylopectin. A bioinformatics analysis of the putative SUSIBA2-like binding elements in the promoter regions of the upregulated genes indicated that the SUSIBA2-like transcription factor may be instrumental in promoting the carbon reallocation from amylose to amylopectin. Conclusion Analyses of carbohydrate and oil fractions and gene expression

  2. Gas Transmission and Water Vapor Transmission Properties of High-Amylose Corn Starch/Chitosan Edible Film%高直链玉米淀粉-壳聚糖复合膜透气透水性能研究

    Institute of Scientific and Technical Information of China (English)

    陈琼; 邱礼平; 马细兰

    2011-01-01

    In this experiment, edible films from high-amylose com starch (HACS) and chitosan (CS) were developed by casting film-solution on leveled trays. The effects of ratio of starch to chitosan, glycerol dosage and methylcellulose (MC) dosage on CO2 and O2 transmission, water vapor transmission (WVT) of edible films were investigated. The result showed that the edible composite fihns had the lowest CO2 and O2 transmission and lower WVT when the ratio of chitosan and content of glycerol reach 2:1. The value of CO2 and O2 transmission increase to the highest and then decrease, and WVT increased while the ratio of chitosan and content of glycerol continued decrease. The increase of content of glycerol improved the CO2, O2 transmission and WVT of edible films first, and then decreased gradually. The addition of 2% methylcellulose decreased the gas permeability properties of the edible film to the lowest When the content of methylcellulose was between 4% and 6%, WVT of the edible film reached the lowest.%本文以高直链玉米淀粉(HACS)和壳聚糖(CS)为基本材料,甘油为增塑剂,甲基纤维素(MC)为增强剂制备可食性复合膜,研究了高直链玉米淀粉与壳聚糖的配比、甘油的添加量以及甲基纤维素的添加量对复合膜的透气透水性能的影响.结果表明,HACS:CS为2:1时,膜的CO2透过量和O2透过量最低,水蒸气透过量(WVT)也处于较低水平.随着HACS:CS的降低,膜的CO2透过量和O2透过量增加到最大值再降低,而WVT值呈增大趋势.甘油量的增加使复合膜的CO2透过量和O2透过量先增加后降低,而WVT变化趋势与透气量一致.MC的添加量为2%时,HACS/CS复合膜的透气量最低,而在MC添加量4%~6%时,膜的WVT最低.

  3. Caracterização físico-química, reológica, morfológica e térmica dos amidos de milho normal, ceroso e com alto teor de amilose Physicochemical, rheological, morphological, and thermal characterization of normal, waxy, and high amylose corn starches

    Directory of Open Access Journals (Sweden)

    Fernanda Hart Weber

    2009-12-01

    Full Text Available O objetivo do presente estudo foi avaliar os amidos de milho normal, ceroso e com alto teor de amilose, fabricados pela National Starch, por meio da determinação das suas características físico-químicas, morfológicas, térmicas e reológicas. O amido de milho com alto teor de amilose (AM apresentou teor de amilose igual a 71%, sendo que os valores obtidos para o amido de milho normal (M e o amido de milho ceroso (AP foram de 27,8 e 1,8%, respectivamente. Traços de proteína e lipídios foram encontrados nas amostras. O amido de milho ceroso apresentou maior viscosidade máxima e uma menor tendência à retrogradação, se comparado ao amido de milho normal. O amido AP apresentou menor entalpia de gelatinização, como pode ser observado nas análises de calorimetria exploratória diferencial (DSC, na qual a temperatura de gelatinização foi de 75 °C e o ΔH de 3,34 J.g-1, e também na análise de RVA (Rapid Visco Analyser, em que a temperatura de pasta foi de 71 °C. Apresentando, dessa forma, valores inferiores aos verificados para os outros amidos. O valor do ΔH de retrogradação do amido AP, mostrou-se 25,8% inferior ao ΔH do amido M. O amido AM apresentou o valor de 26,38 J.g-1, demonstrando o maior envolvimento da molécula de amilose no processo de retrogradação. Isso também foi evidenciado pela medida da força dos géis: o gel de AM apresentou força 99,18% superior, retrogradando mais que os outros amidos. As análises de difração de raio X mostraram que os amidos de milho normal e ceroso apresentaram um padrão de difração do tipo A e o amido de milho com alto teor de amilose apresentou padrão do tipo B.The objective of this work was to evaluate normal, waxy, and high amylose corn starches from National Starch, through the determination of the physicochemical, morphological, thermal, and rheological properties. The high amylose corn starch (AM presented amylose content of 71%, and the value of this component for the

  4. Effect of replacing corn with hulled and hulless or low-amylose hulless barley varieties on growth performance and carcass quality of Italian growing-finishing pig.

    Science.gov (United States)

    Prandini, A; Sigolo, S; Giuberti, G; Moschini, M; Marchetto, G; Della Casa, G

    2015-02-01

    A study was conducted to evaluate the effect of diets based on hulled or hulless (normal- and low-amylose) barley varieties on growth performance and carcass characteristics in heavy growing-finishing pigs for the production of protected designation of origin (PDO) Italian products. The study was performed with 40 gilts and 40 barrows (Italian Duroc × Italian Large White). Four diets were formulated: 1) corn-based diet (control), 2) control diet with 80% of a normal-amylose hulled barley variety named Cometa (Cometa), 3) control diet with 80% of a normal-amylose hulless barley variety named Astartis (Astartis), and 4) control diet with 80% of a low-amylose hulless barley variety named Alamo (Alamo). The diets were formulated according to 3 growth phases (P1, 40 to 80 kg BW; P2, 80 to 120 kg BW; and P3, 120 to 170 kg BW), with the same Lys:DE ratio (2.60, 2.20, and 1.80, respectively in P1, P2, and P3) according to the NRC requirements for P1 and P2 and according to requirements for high-performing pigs for P3. The diets were analyzed for their in vitro starch digestion potentials (predicted glycemic index, pGI) and for their resistant starch (RS) contents. In P1, P2, and P3, the Alamo diet had the numerically lowest RS contents and greatest pGI values, whereas the control diet had the numerically greatest RS contents and the lowest pGI values. Throughout the study, the pigs fed Cometa and Alamo diets grew faster (P 0.05). This study showed that diets based both on hulled and hulless barley might be suitable for the heavy pig breeding intended to the production of Italian PDO products. In addition, hulled or low-amylose hulless barley could be valuable to support maximum pig growth performance without affecting carcass composition.

  5. Starch granule protein (SGP) polymorphism in cultivated naked barley from Qinghai-Tibet Plateau in China and relationship between SGPs and starch/amylose content

    Institute of Scientific and Technical Information of China (English)

    Zhifen PAN; Yixing ZOU; Tao ZHAO; Guangbing DENG; Xuguang ZHAI; Fang WU; Maoqun YU

    2008-01-01

    Starch granule proteins (SGPs) are minor components bound with starch granule, whose variation could impact starch properties. This study investigated, for the first time, the variation of SGPs in the cultivated naked barley from Qinghai-Tibet Plateau in China. The relation-ship between SGPs and starch content was preliminarily dealt with. Ten major SGPs and 16 types of patterns were present in the 66 cultivated naked varieties, indicating that the SGPs in cultivated naked barley from Qinghai-Tibet Plateau in China are polymorphic. The SGPs of naked barley in Tibet and Sichuan were greatly different and the SGP patterns were specific to sampling regions. Significance test analysis demonstrated that the SGPs described in this study, except for SGP1, could be related with the variation of starch content in the different naked barleys.

  6. Structure of branching enzyme- and amylomaltase modified starch produced from well-defined amylose to amylopectin substrates

    DEFF Research Database (Denmark)

    Sorndecha, Waraporn; Sagnelli, Domenico; Meier, Sebastian

    2016-01-01

    Thermostable branching enzyme (BE, EC 2.4.1.18) from Rhodothermus obamensis in combination with amylomaltase (AM, EC 2.4.1.25) from Thermus thermophilus was used to modify starch structure exploring potentials to extensively increase the number of branch points in starch. Amylose is an important...... constituent in starch and the effect of amylose on enzyme catalysis was investigated using amylose-only barley starch (AO) and waxy maize starch (WX) in well-defined ratios. All products were analysed for amylopectin chain length distribution, α-1,6 glucosidic linkages content, molar mass distribution...... by the molar mass rather that the branching density of the glucan per se . Our data demonstrate that a higher amylose content in the substrate starch efficiently produces α-1,6 glucosidic linkages and that the present of amylose generates a higher Μw and more resistant product than amylopectin. The combination...

  7. Solvent-responsive behavior of inclusion complexes between amylose and polytetrahydrofuran.

    Science.gov (United States)

    Rachmawati, Rachmawati; Woortman, Albert J J; Loos, Katja

    2014-01-01

    Highly crystalline amylose-polytetrahydrofuran (PTHF) complexes can be obtained by employing organic solvents as washing agents after complex formation. The X-ray diffraction (XRD) of the washed complexes appear sharp at 12.9°-13.2° and 19.6°-20.1°, clear signs of the presence of V6I -amylose. Other diffraction peaks correlate with V6II -amylose, which indicates that the complexed amylose helices are in the form of an intermediate or a mixture of V6I - and V6II -amylose. SEM imaging reveals that the amylose-PTHF complexes crystallize in the form of lamellae, which aggregate in a round shape on top of one another with a diameter around 4-8 μm. Some lamellas aggregate as flower-like or flat-surface spherulitic crystals. There is a visible matrix in between the aggregated lamellas which shows that a part of the amylose-PTHF complexes is amorphous.

  8. Amylose folding under the influence of lipids

    NARCIS (Netherlands)

    Lopez, Cesar A.; de Vries, Alex H.; Marrink, Siewert J.

    2012-01-01

    The molecular dynamics simulation technique was used to study the folding and complexation process of a short amylose fragment in the presence of lipids. In aqueous solution, the amylose chain remains as an extended left-handed helix. After the addition of lipids in the system, however, we observe s

  9. Effects of oligomeric procyanidins on the retrogradation properties of maize starch with different amylose/amylopectin ratios.

    Science.gov (United States)

    Liu, Rui; Xu, Chen; Cong, Xu; Wu, Tao; Song, Yingshi; Zhang, Min

    2017-04-15

    The effect of oligomeric procyanidins (OPCs) on the retrogradation of maize starch with different amylose/amylopectin ratios was investigated. The apparent amylose contents in high-amylose maize (HAM), normal maize (NM), and amylopectin maize (APM) starches are 79.05%, 25.43% and 0%. Structural characterizations of retrograded maize starches in the presence of OPCs were conducted by differential scanning calorimetry (DSC), Fourier transform infrared spectroscopy (FTIR), X-ray diffraction (XRD) and nuclear magnetic resonance (NMR). The results suggest that OPCs inhibit the retrogradation of maize starches in low concentrations (1.5-2.5%) with different inhibitory effects for HAM, NM and APM starches. It may be attributed to the variations on interaction ways and binding capabilities between different types of starches and OPCs. The in vitro enzymatic digestion result indicates HAM starch and OPCs have stronger interactions with the formation of resistant structures. These findings provide a further evidence for exploring the interactions between starches and phenolic compounds. Copyright © 2016. Published by Elsevier Ltd.

  10. 低支链淀粉品种米的储藏性和食味品质评价%Storability and sensory qualities for rice with low amylose content

    Institute of Scientific and Technical Information of China (English)

    邱硕; 川村周三; 程献丽

    2012-01-01

    Changes of physiological properties and sensory qualities for stored rice are critical to acceptance of consumers.In this research,effects of storage temperatures on the storability and sensory qualities for Yumepirika (a low amylose content rice variety) were invesgated.Storability of rough rice was superior to that of brown rice in terms of changes in free fat acidity.In low temperature storage,there were 2.9 and 15.8 mg increase in the free fat acidity for rough rice and brown rice,which indicated that brown rice was necessary to be stored in even lower temperature.Sensory test showed that brown rice in the room temperature storage had the lowest overall flovar value and stickiness value.With storage in the super-low temperature and low temperature for two years,rice vitality and sensory qualities were maintained at similar values compared to the reference sample.%储藏米的生理品质与食味品质变化程度对于消费者的认可度至关重要.本研究讨论了不同储藏温度对低直链淀粉品种米(Yumepirika)的储藏性和食味品质影响.稻谷具有比糙米更加优越的储藏性.在低温条件下储藏,稻谷脂肪酸含量增加2.9 mg,糙米脂肪酸含量增加15.8 mg,这表明低支链淀粉糙米应该在更低的温度下保存.食味试验表明室温条件下储藏的糙米具有最低黏度值和综合评价值.经过2a的储藏期,超低温储藏和低温储藏能够保持米的活力和食味品质与基准米相似的水平.

  11. INFLUENCE OF AMYLOSE STARCH ON DEVELOPMENT AND LIFESPAN OF FRUIT FLY DROSOPHILA MELANOGASTER

    Directory of Open Access Journals (Sweden)

    Oleksandra Abrat

    2015-05-01

    Full Text Available Last years, the concept of resistant starch (RS has evoked a new interest in researchers in the context of bioavailability of starch and its use as a source of dietary fiber. Based on clinical and animal research, RS has been proposed to be the most potentially beneficial starch fraction for human health. In this study, the effects of amylose starch as a fraction of RS on development and lifespan of fruit fly Drosophila melanogaster were investigated. In both Canton S and w1118 strains, the diet with 20% amylose RS delayed fly development, increased triacylglyceride level in the body of adult insects and reduced their lifespan compared to the diet with 4% amylose starch. Thus, our data clearly demonstrate that amylose starch at high concentrations may negatively affect fruit fly.

  12. 交联酶解高直链玉米淀粉的制备及糊化特性%Study on preparation and pasting properties of crosslinking hydrolysis high amylose corn starch

    Institute of Scientific and Technical Information of China (English)

    李德海; 马莺

    2011-01-01

    The crosslinking hydrolysis high amylose corn starch by the isoamylase was prepared with sodium hexametaphosphate as crosslinking agent By the response surface methodology, the optimal process parameters were obtained, sodium hexametaphosphate was 3.12%, pH was 11, temperature was 50℃, time was 2.2h, subsidence product was 2.34mL.The pasting temperature,the viscosity and stability of the crosslinking hydrolysis high amylose corn starch were improved by the analysis of RVA and DSC.%以异淀粉酶水解玉米淀粉制备的高直链玉米淀粉为原料,采用六偏磷酸钠为交联剂,制备交联酶解高直链玉米淀粉.采用响应面实验设计进行优化,结果表明,最佳工艺条件为:六偏磷酸钠的用量为3.12%、pH为11、温度为50℃、时间为2.2h,在此条件下制备的交联酶解高直链玉米淀粉沉降积为2.34mL.RVA和DSC分析表明,酶解高直链玉米淀粉经交联后淀粉的糊化温度、粘度和粘度稳定性较大程度上得到了提高.

  13. ¬¬OPTIMASI PENGGUNAAN HIDROKOLOID TERHADAP PASTA MAKARONI BERBASIS BERAS BERAMILOSA TINGGI [Hydrocolloid Optimization on Maccaroni Pasta from High Amylose Rice

    Directory of Open Access Journals (Sweden)

    Eko Hari Purnomo

    2015-12-01

    Full Text Available Pasta is an extrusion product which is commonly produced from wheat flour. Gluten is key substance of wheat flour that affect quality of pasta, such as low cooking loss, low adhesiveness and firm pasta structure. However, gluten may cause health problem for consumers with celiac disease or gluten intolerance. Rice is safe for celiac disease sufferer, but it is technologically challenging to develop rice-based pasta. The objective of this research was to evaluate the effect of different ratio between xanthan gum and guar gum (2% on the physical characteristics of macaroni pasta from rice flour. This research consisted of several steps which include flour milling and characterization, formulation, and final product analysis. The result showed that different ratio of xanthan gum and guar gum had significant effect to cooking loss, adhesiveness, springiness and hue parameters (P0.05. The optimum formula was noodle by hydrocolloid ratio 2% of xanthan gum and 0 % of guar gum which had desirability value of 0.798. The selected formula was organoleptically accepted by panelists and containing 9.84 % of water, 1.65% of ash, 12.05% of protein, 1.41% of fat, 75.05% of carbohydrate, 24.49% of amylose, also 33.49 "μm" of pore size.

  14. Evaluating the effects of amylose and Concord grape extract powder substitution on physicochemical properties of wheat flour extrudates produced at different temperatures.

    Science.gov (United States)

    Tacer-Caba, Zeynep; Nilufer-Erdil, Dilara; Boyacioglu, M Hikmet; Ng, Perry K W

    2014-08-15

    In this study, the effects of Concord grape extract powder (CGEP), high-amylose starch, and their combinations on quality parameters of extruded products were investigated by substituting wheat flour with those ingredients in the formulations. Physical quality parameters such as water absorption, bulk density, diametric expansion and hardness of extrudates were evaluated in addition to thermal properties, pasting properties and resistant starch contents. Average values obtained for 90, 120 and 150 °C extrusion temperatures changed respectively as follows: 0.916, 0.987 and 0.467 N for hardness; 2.12, 4.07 and 5.12 ml water/g sample for water absorption; 1.35, 2.09 and 2.51 for diametric expansions and 1286.6, 723.6 and 311.1 kg/m(3) for bulk densities. Extrusion temperature was found to have more distinct effect on physical quality parameters of extrudates than the substitution level of ingredients. Both CGEP and amylose additions negatively affected pasting properties, slightly affected resistant starch content and prevented gelatinization. However retardation of retrogradation was more evident when substitution was with CGEP alone rather than its combination with amylose.

  15. Amylose-iodine complex. I. Sedimentation behavior.

    Science.gov (United States)

    Dintzis, F R; Beckwith, A C; Babcock, G E; Tobin, R

    1976-01-01

    Sedimentation measurements are reported on solutions of blue amylose-iodine complexes in the range of 0.001 to 0.007% amylose. Amylose fractions B and F2, of weight average molecular weight average molecular weight 4.0 X 10(5) and 3.4 X 10(4), respectively, were used in this study. Iodine complexes of these fractions formed polydisperse solutions of limited solubility and stability. Sedimentation coefficients increased as a function of potassium iodide concentration. Values for fraction B complexes varied from (16.3 +/- 1.0) X 10(-13) at 1.2 X 10(-3) M KI to (57.2 +/- 7.5) X 10(-13) at 8.3 X 10(-3) M KI; values for fraction F2 complexes varied from (10.0 +/- 1.2) X 10(-13) at 1.2 X 10(-13) M KI to (24.8 +/- 3.9) X 10(-13) at 9.5 X 10(-3) M KI. At constant potassium iodide concentration, sedimentation coefficients, within our experimental error of 10 to 15% standard deviation, are independent of amylose concentration. Time dependence of sedimentation coefficient values was observed for solutions either saturated or unsaturated with respect to the iodine-binding capacity of amylose. For iodine-saturated complex solutions, sedimentation coefficients extrapolated to zero potassium iodide concentration were two to three times greater than for the parent amylose. Measurements are evaluated in terms of possible polyelectrolytic charge effects and aggregation. Under conditions used in these experiments, aggregation of amylose-iodide complexes appears to be the mechanism responsible for the large increase in sedimentation coefficients.

  16. Estabilidade de géis de amido de milho normal, ceroso e com alto teor de amilose adicionados de gomas guar e xantana durante os processos de congelamento e descongelamento Freeze-thaw stability of normal, waxy and high amylose corn starch gels with added guar and xanthan gums

    Directory of Open Access Journals (Sweden)

    Fernanda Hart Weber

    2008-06-01

    Full Text Available O objetivo do presente trabalho foi estudar os efeitos das gomas guar e xantana sobre a estabilidade dos géis de amido de milho normal, ceroso e com alto teor de amilose submetidos aos processos de congelamento e descongelamento. Os géis desses amidos, com concentração total de sólidos de 10% e adicionados das gomas (0,15; 0,50; 0,85 e 1%, foram submetidos a 5 ciclos de congelamento (20 horas a -18 °C e descongelamento (4 horas a 25 °C, com exceção dos géis com alto teor de amilose, que foram submetidos a apenas 1 ciclo, devido à perda da estrutura de gel. A determinação da sinérese (porcentagem de água liberada foi realizada pela diferença entre a massa inicial e a massa final das amostras. O gel de amido de milho normal liberou 74,45% de água, sendo que a adição de 1% da goma xantana reduziu significativamente a sinérese para 66,43%. A adição de 0,85 e 1% da goma xantana também reduziu a sinérese dos géis de amido ceroso. O menor teor de sinérese foi obtido com a utilização de 1% de goma xantana ao gel de amido de milho com alto teor de amilose, evidenciando a ação crioprotetora desta goma.The objective of the present work was to study the effects of guar and xanthan gums on the stability of normal, waxy and high amylose corn starch gels, submitted to freeze-thaw processes. The gels of these starches with a total solids content of 10% and added gums (0.15;0.50;0.85and1%, were submitted to 5 freezing (20 hours, -18 °C and thawing (4 hours, 25 °C cycles, with exception of the high amylose gels that were submitted to only 1 cycle. Syneresis (% water released was determined by the difference between the initial and final masses of the samples. The normal corn starch gel released 74.45% water and the addition of 1% xanthan gum significantly reduced syneresis to 66.43%. The incorporation of 0.85 and 1% xanthan gum also reduced syneresis of waxy starch gels. The lowest level of syneresis was reached with the use of 1

  17. Facile Preparation Method for Inclusion Complexes between Amylose and Polytetrahydrofurans

    NARCIS (Netherlands)

    Rachmawati, Rachmawati; Woortman, Albert J. J.; Loos, Katja

    Several methods were used to investigate the possibility of preparing inclusion complexes between amylose and polytetrahydrofurans (PTHF) via direct mixing. Potato amylose (M-v similar to 200 kg/mol) and synthetic amylose (M-n 42 kg/mol) were complexed with PTHF having different molecular weights

  18. Two unique ligand-binding clamps of Rhizopus oryzae starch binding domain for helical structure disruption of amylose.

    Directory of Open Access Journals (Sweden)

    Ting-Ying Jiang

    Full Text Available The N-terminal starch binding domain of Rhizopus oryzae glucoamylase (RoSBD has a high binding affinity for raw starch. RoSBD has two ligand-binding sites, each containing a ligand-binding clamp: a polyN clamp residing near binding site I is unique in that it is expressed in only three members of carbohydrate binding module family 21 (CBM21 members, and a Y32/F58 clamp located at binding site II is conserved in several CBMs. Here we characterized different roles of these sites in the binding of insoluble and soluble starches using an amylose-iodine complex assay, atomic force microscopy, isothermal titration calorimetry, site-directed mutagenesis, and structural bioinformatics. RoSBD induced the release of iodine from the amylose helical cavity and disrupted the helical structure of amylose type III, thereby significantly diminishing the thickness and length of the amylose type III fibrils. A point mutation in the critical ligand-binding residues of sites I and II, however, reduced both the binding affinity and amylose helix disruption. This is the first molecular model for structure disruption of the amylose helix by a non-hydrolytic CBM21 member. RoSBD apparently twists the helical amylose strands apart to expose more ligand surface for further SBD binding. Repeating the process triggers the relaxation and unwinding of amylose helices to generate thinner and shorter amylose fibrils, which are more susceptible to hydrolysis by glucoamylase. This model aids in understanding the natural roles of CBMs in protein-glycan interactions and contributes to potential molecular engineering of CBMs.

  19. Chemometric Amylose Modeling and Sample Selection for Global Calibration Using Artificial Neural Networks

    Institute of Scientific and Technical Information of China (English)

    SHIMIZU N; OKADOME H; WADA D; KIMURA T; OHTSUBO K

    2008-01-01

    Chemometric arnylose modeling for global calibration, using whole grain near infrared transmittance spectra andsample selection, was used in an artificial neural network (ANN), to assess the global and local models generated, based onsamples of newly bred Indica, Japonica and rice. Global sample sets had a wide range of sample variation for amylose content(0 to 25.9%). The local sample set, Japonica sample, had relatively low amylose content and a narrow sample variation(amylose; 12.3% to 21.0%). For sample selection the CENTER algorithm was applied to generate calibration, validation andstop sample sets. Spectral preprocessing was found to reduce the optimum number of partial least squares (PLS) componentsfor amylose content and thus enhance the robustness of the local calibration. The best model was found to be an ANN globalcalibration with spectral preprocessing; the next was a PLS global calibration using standard spectra. These results pose thequestion whether an ANN algorithm with spectral preprocessing could be developed for global and local calibration models orwhether PLS without spectral preprocessing should be developed for global calibration models. We suggest that global calibra-tion models incorporating an ANN may be used as a universal calibration model.

  20. Enzyme Kinetics: The Use of Amylose Azure.

    Science.gov (United States)

    Cusimano, Vincent J.

    1978-01-01

    Amylose azure can be used as a chromogenic substrate for alpha-amylase in studying the effects of temperature and pH enzyme action. This is a model system which students can use to measure the energy of activation using the Arrhenius plot. (Author/BB)

  1. Identification of genes encoding granule-bound starch synthase involved in amylose metabolism in banana fruit.

    Directory of Open Access Journals (Sweden)

    Hongxia Miao

    Full Text Available Granule-bound starch synthase (GBSS is responsible for amylose synthesis, but the role of GBSS genes and their encoded proteins remains poorly understood in banana. In this study, amylose content and GBSS activity gradually increased during development of the banana fruit, and decreased during storage of the mature fruit. GBSS protein in banana starch granules was approximately 55.0 kDa. The protein was up-regulated expression during development while it was down-regulated expression during storage. Six genes, designated as MaGBSSI-1, MaGBSSI-2, MaGBSSI-3, MaGBSSI-4, MaGBSSII-1, and MaGBSSII-2, were cloned and characterized from banana fruit. Among the six genes, the expression pattern of MaGBSSI-3 was the most consistent with the changes in amylose content, GBSS enzyme activity, GBSS protein levels, and the quantity or size of starch granules in banana fruit. These results suggest that MaGBSSI-3 might regulate amylose metabolism by affecting the variation of GBSS levels and the quantity or size of starch granules in banana fruit during development or storage.

  2. Efeito do teor de água, amilose, amilopectina e grau de gelatinização no crescimento do biscoito de amido de mandioca obtido por fermentação natural Effect of the water, amylose, amylopectin contents and the degree of gelatinization on the sour cassava (Manihot sculenta, K. starch biscuit growth

    Directory of Open Access Journals (Sweden)

    Claudio Ernani MENDES DA SILVA

    1998-04-01

    Full Text Available O amido de mandioca, assim como o amido de araruta, modificado por fermentação natural, quando formulado com água, sal e gordura vegetal hidrogenada para produzir o biscoito de "polvilho azedo", tem a propriedade de se expandir durante a cocção, como se nessa formulação existisse um agente aerante. O produto final obtido, tem uma estrutura alveolar, crocante e de baixa densidade. Pouco se conhece a respeito do mecanismo que envolve essa expansão e sobre os fatores que interferem na mesma. No presente trabalho, investigamos a influência do teor de água, o efeito da pré-gelatinização do amido fermentado e a adição de amilose e de amilopectina no crescimento do biscoito. O tempo de formação do biscoito, demonstrou ser altamente dependente do teor de água presente na sua formulação. A gelatinização total do amido modificado por fermentação, parece destruir completamente suas propriedades de expansão, pois não foi observado crescimento do biscoito com uma formulação padrão contendo apenas amido totalmente gelatinizado. Biscoitos formulados com amilose ou amilopectina em substituição ao amido fermentado, apresentaram baixo grau de expansão quando comparados ao padrão.The sour cassava starch (and also ararut starch is unique in the ability to produce a biscuit (made of water, shortening and salt that oven springs during baking as if it has in its formulation a leavening agent. The final product has an alveolar structure, it is crocant and low density. The fators that control its growth are unknown. In this paper were investigated the effects of the water, pregelatinized sour cassava starch, amylose and amylopectin contents on the biscuit growth. It has been showed that the time of formation of the biscuit structure depends on the water formulation content. The complete gelatinization of this starch seems to destroy its unique property to grow with heat as if it had a leavening agent in its formulation. Biscuits made of

  3. Biodegradable amylose films reinforced by graphene oxide and polyvinyl alcohol

    Energy Technology Data Exchange (ETDEWEB)

    He, Yongqiang [Department of Applied Chemistry, Yuncheng University, Yuncheng 044000 (China); School of Science, Tianjin University, Tianjin 300072 (China); Wang, Xingrui [School of Science, Tianjin University, Tianjin 300072 (China); Wu, Di [Huanhu Hospital, Tianjin 300060 (China); Gong, Qiaojuan [Department of Applied Chemistry, Yuncheng University, Yuncheng 044000 (China); Qiu, Haixia, E-mail: qhx@tju.edu.cn [School of Science, Tianjin University, Tianjin 300072 (China); Liu, Yue; Wu, Tao; Ma, Junkui [School of Science, Tianjin University, Tianjin 300072 (China); Gao, Jianping, E-mail: jianpinggaols@126.com [School of Science, Tianjin University, Tianjin 300072 (China)

    2013-10-01

    Graphene oxide/amylose (GO/amylose) composite films with different amounts of graphene oxide (GO), glycerol and polyvinyl alcohol (PVA) were prepared by a solution casting method. The structure, morphologies, and properties of the films were characterized by scanning electron microscopy, Fourier transform infrared spectroscopy, X-ray diffraction, thermal gravimetric analysis, UV–vis spectroscopy and tensile tests. The results indicated good dispersion of the GO nanosheets in the GO/amylose composite films and consequently a significant improvement in their mechanical properties. The addition of GO increased the tensile strength of the GO/amylose films, significantly. When glycerol was used as a plasticizer, the elongation at break of the films increased. When PVA was also added to the composite films, the films were mechanically strong and flexible. The incorporation of GO also decreased the moisture absorbability and UV transmittance of the films. The stability of the GO/amylose films in acidic and alkaline solutions was also studied and the films had excellent stability in both acidic and alkaline aqueous mediums. - Highlights: • GO/amylose composite films were prepared by a solution casting method. • GO/amylose composite films had good dispersion of GO in the composite. • GO/amylose composite films had a significant improvement in mechanical properties. • GO/amylose composite films were stable in both acidic and alkaline aqueous mediums.

  4. Amylose-lipid complexes as controlled lipid release agents during starch gelatinization and pasting.

    Science.gov (United States)

    Gelders, Greta G; Goesaert, Hans; Delcour, Jan A

    2006-02-22

    The effect of amylose-lipid (AM-L) complexes consisting of amylose populations with different peak degrees of polymerization (DP) and complexed with glyceryl monostearate (GMS) or docosanoic acid (C22) on the pasting properties of wheat and rice starches was evaluated with a rapid visco analyzer (RVA). AM-L complexes were formed by both (i) addition of lipids to amylose fractions with peak DP 20, 60, 400, or 950 at 60 degrees C or (ii) potato phosphorylase-catalyzed amylose synthesis in the presence of lipids. All AM-L complexes affected pasting properties in line with their dissociation characteristics. AM-L complexes therefore have potential as "controlled lipid release agents" with effects markedly different from those observable with emulsifier addition in starch pasting. More in particular, short chain AM-L complexes resulted in a starch pasting behavior comparable to that of cross-linked starch, as evidenced by reduced granule swelling, good viscosity stability in conditions of high temperature and shear, and a stable cold paste viscosity.

  5. 高直链玉米淀粉的糊化特性研究%Study on gelatinization properties of high amylose corn starch

    Institute of Scientific and Technical Information of China (English)

    徐忠; 刘雪唯; 王志鹏; 徐巧娇; 赵丹

    2015-01-01

    Objective The effect of water bath heating, microwave heating and high pressure heating on the gelatinization properties of high amylase corn starch were studied,the theoretical basis for further study on development and application of high amylase corn starch were provided. Methods High amylase corn starch based starch paste was prepared under excessive water by water bath heating, microwave heating and high pressure heating method,the variation rules of the blue value and enzyme hydrolysability of high amylase corn starch as the increase of gelatinization time under different temperature and microwave power were studied. Results Blue value and enzyme hydrolysability of high amylase corn starch prepared by water bath heating, microwave heating and high pressure heating increased as the prolong of heating time during gelatinization. the blue value and enzyme hydrolysability of high amylase corn starch paste prepared by microwave were lower than those by high pressure heating, and higher than those by water bath heating, and the gelatinization rate of starch prepared by microwave was faster than that by water bath heating and that by high pressure heating. Conclusion The gelatinization effect and degree of starch prepared were better by high pressure heating, which was a good method to make high amylase corn starch gelatinized entirely.%目的:研究水浴加热、微波加热和高压加热方法对高直链玉米淀粉糊化性能的影响,为高直链淀粉的进一步开发和应用提供理论基础。方法以高直链玉米淀粉为原料,在过量水分存在条件下,分别采用水浴加热、微波加热和高压加热制备高直链玉米淀粉糊,分别研究不同温度和微波功率下,高直链玉米淀粉糊碘兰值和酶解力随糊化时间增加的变化规律。结果水浴加热、微波加热和高压加热糊化过程中高直链玉米淀粉的碘兰值和酶解力均随时间的延长呈上升趋势,微波加热高直链玉

  6. Single crystals of V Amylose complexed with glycerol

    NARCIS (Netherlands)

    Hulleman, S.H.D.; Helbert, W.; Chanzy, H.

    1996-01-01

    Lamellar single crystals of amylose V glycerol were grown at 100°C by evaporating water from solutions of amylose in aqueous glycerol. The crystals which were square, with lateral dimensions of several micrometers, gave sharp electron diffraction patterns presenting an orthorhombic symmetry with a p

  7. Hierarchically Self-Assembled Nanofiber Films from Amylose-Grafted Carboxymethyl Cellulose

    Directory of Open Access Journals (Sweden)

    Daisuke Hatanaka

    2014-01-01

    Full Text Available In this paper, we report the formation of hierarchically self-assembled nanofiber films from amylose-grafted sodium carboxymethyl celluloses (NaCMCs that were synthesized by a chemoenzymatic approach. First, maltooligosaccharide primer-grafted NaCMCs were prepared by a chemical reaction using two kinds of NaCMCs with different degrees of polymerization (DPs from Avicel and cotton sources. Then, phosphorylase-catalyzed enzymatic polymerization of α-d-glucose 1-phosphate from the nonreducing ends of the primer chains on the products was conducted to produce the prescribed amylose-grafted NaCMCs. The films were obtained by drying aqueous alkaline solutions of the amylose-grafted NaCMCs. The scanning electron microscopy (SEM image of the film fabricated from the material with the higher DP from the cotton source showed a clear, self-assembled, highly condensed tangle of nanofibers. The SEM image of the material with the lower DP from the Avicel source, on the other hand, showed an unclear nanofiber morphology. These results indicate that the DPs of the main chains in the materials strongly affected the hierarchically self-assembled nanofiber formation. The SEM images of the films after washing out the alkali, furthermore, showed that the fibers partially merged with each other at the interfacial area owing to the double helix formation between the amylose-grafted chains. The mechanical properties of the films under tensile mode also depended on the self-assembled morphologies of the amylose-grafted NaCMCs from the different sources.

  8. New aluminium alloys with high lithium content

    Energy Technology Data Exchange (ETDEWEB)

    Schemme, K.; Velten, B.

    1989-06-01

    Since the early 80's there have been made great efforts to replace the high strength aluminium alloys for the aircraft and space industry by a new generation of aluminium-lithium alloys. The attractivity of this kind of alloys could be increased by a further reduction of their density, caused by an increasing lithium content (/ge/ 5 wt.% Li). Therefore binary high-lithium containing alloys with low density are produced and metallografically investigated. A survey of their strength and wear behavior is given by using tensile tests and pin abrasing tests. (orig.).

  9. Computer vision for high content screening.

    Science.gov (United States)

    Kraus, Oren Z; Frey, Brendan J

    2016-01-01

    High Content Screening (HCS) technologies that combine automated fluorescence microscopy with high throughput biotechnology have become powerful systems for studying cell biology and drug screening. These systems can produce more than 100 000 images per day, making their success dependent on automated image analysis. In this review, we describe the steps involved in quantifying microscopy images and different approaches for each step. Typically, individual cells are segmented from the background using a segmentation algorithm. Each cell is then quantified by extracting numerical features, such as area and intensity measurements. As these feature representations are typically high dimensional (>500), modern machine learning algorithms are used to classify, cluster and visualize cells in HCS experiments. Machine learning algorithms that learn feature representations, in addition to the classification or clustering task, have recently advanced the state of the art on several benchmarking tasks in the computer vision community. These techniques have also recently been applied to HCS image analysis.

  10. Which Starch Fraction is Water-Soluble, Amylose or Amylopectin?

    Science.gov (United States)

    Green, Mark M.; And Others

    1975-01-01

    A survey of 22 popular organic chemistry textbooks showed that only four correctly stated that of the two components of starch, amylopectin is the water-soluble, and amylose is the water-insoluble. (MLH)

  11. Effect of annealing and pressure on microstructure of cornstarches with different amylose/amylopectin ratios.

    Science.gov (United States)

    Liu, Hongsheng; Yu, Long; Simon, George; Zhang, Xiaoqing; Dean, Katherine; Chen, Ling

    2009-02-17

    This work focuses on the effect of annealing and pressure on microstructures of starch, in particular the crystal structure and crystallinity to further explore the mechanisms of annealing and pressure treatment. Cornstarches with different amylose/amylopectin ratios were used as model materials. Since the samples covered both A-type (high amylopectin starch: waxy and maize) and B-type (high amylose starch: G50 and G80) crystals, the results can be used to clarify some previous confusion. The effect of annealing and pressure on the crystallinity and double helices were investigated by X-ray diffraction (XRD) and (13)C CP/MAS NMR spectroscopy. The crystal form of various starches remained unchanged after annealing and pressure treatment. XRD detection showed that the relative crystallinity (RC) of high amylopectin starches was increased slightly after annealing, while the RC of high amylose-rich starches remained unchanged. NMR measurement supported the XRD results. The increase can be explained by the chain relaxation. XRD results also indicated that some of the fixed region in crystallinity was susceptible to outside forces. The effect of annealing and pressure on starch gelatinization temperature and enthalpy are used to explore the mechanisms.

  12. Solvent-Responsive Behavior of Inclusion Complexes Between Amylose and Polytetrahydrofuran

    NARCIS (Netherlands)

    Rachmawati, R; Woortman, Albert J.J.; Loos, Katja

    2014-01-01

    Highly crystalline amylose–polytetrahydrofuran (PTHF) complexes can be obtained by employing organic solvents as washing agents after complex formation. The X-ray diffraction (XRD) of the washed complexes appear sharp at 12.9°–13.2° and 19.6°–20.1°, clear signs of the presence of V6I-amylose. Other

  13. Molecular characteristics of amylose and starch in dimethyl sulfoxide.

    Science.gov (United States)

    Radosta, S; Haberer, M; Vorwerg, W

    2001-01-01

    The aim of this work was the molecular characterization of starch polysaccharides to determine solution structure. Studies of amylose and potato starches of different origins were carried out by the static light scattering, dynamic light scattering, and HPSEC-MALLS methods. Molecular parameters such as Mw, Rg, A2, molar mass distribution, Dz, Rh, the structure-dependent rho-parameter, and osmotic modulus for amylose were determined. The Mw of amylose was found to be in the range from 1 x 10(5) to 1 x 10(6) g mol-1. The Mw of potato starches was much higher, that is, in the range of 23-37 x 10(6) g mol-1. The Rg of the amylose samples was in the range of 24-71 nm, and that of the potato starches was between 130 and 150 nm. The intensity-time correlation function showed one diffusive relaxation motion for amylose as well as for starch. The diffusion coefficients of the amylose prepared from starch by several methods were in the range of 2.7-9.1 x 10(-8) cm2 s-1, and those of the starches were 1 magnitude lower between 4.8 and 6.7 x 10(-9) cm2 s-1. The rho-parameter of amylose was calculated as having values between 1.5 and 2.2, and that of starches was calculated to be an average value of 0.62. The assumed solution behavior of amylose in dimethyl sulfoxide corresponds to that of a flexible chain, while the behavior of starch more closely resembles that of a spherelike structure.

  14. Concerted suppression of all starch branching enzyme genes in barley produces amylose-only starch granules

    DEFF Research Database (Denmark)

    Carciofi, Massimiliano; Blennow, Per Gunnar Andreas; Jensen, Susanne Langgård

    2012-01-01

    In this study we invented a new method for silencing of multiple genes. Using a chimeric RNAi hairpin we simultaneously suppressed all genes coding for starch branching enzymes (SBE I, SBE IIa, SBE IIb) in barley (Hordeum vulgare L.), resulting in production of amylose-only starch granules in the endosperm....... This trait was segregating 3:1. Amylose-only starch granules were irregularly shaped and showed peculiar thermal properties and crystallinity. Transgenic lines retained high-yield possibly due to a pleiotropic upregualtion of other starch biosynthetic genes compensating the SBEs loss. For gelatinized starch...... yield in a living organism. This was achieved by a new method of simultaneous suppression of the entire complement of genes encoding starch branching enzymes. We demonstrate that amylopectin is not essential for starch granule crystallinity and integrity. However the slower initial growth of shoots from...

  15. High content screening in microfluidic devices

    Science.gov (United States)

    Cheong, Raymond; Paliwal, Saurabh; Levchenko, Andre

    2011-01-01

    Importance of the field Miniaturization is key to advancing the state-of-the-art in high content screening (HCS), in order to enable dramatic cost savings through reduced usage of expensive biochemical reagents and to enable large-scale screening on primary cells. Microfluidic technology offers the potential to enable HCS to be performed with an unprecedented degree of miniaturization. Areas covered in this review This perspective highlights a real-world example from the authors’ work of HCS assays implemented in a highly miniaturized microfluidic format. Advantages of this technology are discussed, including cost savings, high throughput screening on primary cells, improved accuracy, the ability to study complex time-varying stimuli, and ease of automation, integration, and scaling. What the reader will gain The reader will understand the capabilities of a new microfluidics-based platform for HCS, and the advantages it provides over conventional plate-based HCS. Take home message Microfluidics technology will drive significant advancements and broader usage and applicability of HCS in drug discovery. PMID:21852997

  16. Enantiomer separation of polychlorinated biphenyls on chiral chromatographic columns of cellulose and amylose by high-performance liquid chromatography%多氯联苯在纤维素和直链淀粉衍生物类手性色谱柱上的拆分

    Institute of Scientific and Technical Information of China (English)

    尹文华; 吴丞往; 方力; 张安平

    2012-01-01

    由于多氯联苯(Polychlorinated biphenyls)的纯对映体样品非常难得,国内外大多数的研究工作仅局限于外消旋体,而较少对其对映体的环境行为、生物毒性进行研究.采用三种不同的手性色谱柱对21种手性多氯联苯在不同流动相体系进行了拆分.最终有17种手性多氯联苯达到基线或部分分离,在纯正己烷流动相体系的拆分效果最佳.直链淀粉-三(5-氯-2-甲基苯基氨基甲酸酯)固定相具有很强的手性识别能力,Lux 3u Amylose-2柱可以作为Lux 3u Cellulose-1柱手性拆分的很好补充.当手性多氯联苯分子只含一个4号位氯代或同时含有5,5,号位氯代时,三种手性色谱柱较难对其分离完全.该方法分离速度快,可以作为纯对映体样品的制备方法.%Due to the enantiomer of polychlorinated biphenyls is rare, most of researches were focused on racemes, rather than environmental behavior or biotoxicity of enantiomer at home and abroad. The work investigated enantiomeric separation of 21 kinds of polychlorinated biphenyls with different chiral chromatographic columns by high-performance liquid chromatography. 17 kinds of PCBs achieved baseline or were at least partially separated. This was proved to be the most efficient for the chiral separation of 100% n-hexane mobile phase. As a kind of chiral stationary phases (CSPs), amylose tris (5-chlorine 2-methylphenylcarbamate) has a strong capacity of chiral recognition. Lux 3u Amylose-2 CSP is a great complementary for the chiral separation of Lux 3u Cellulose-1 CSP. The separations are difficult to be achieved for these three CSPs when polychlorinated biphenyls with chlorine substitution only in 4 position or in 5, 5' positions simultaneously. However, this approach could be used to obtain pure enantiomer of PCBs.

  17. Development of Amylose- and β-Cyclodextrin-Based Chiral Fluorescent Sensors Bearing Terthienyl Pendants

    Directory of Open Access Journals (Sweden)

    Tomoyuki Ikai

    2016-11-01

    Full Text Available Phenylcarbamate derivatives of amylose and β-cyclodextrin show excellent chiral recognition when used as chiral stationary phases (CSPs for high-performance liquid chromatography. To open up new possibilities of carbohydrate-based materials, we developed chiral fluorescent sensors based on amylose and β-cyclodextrin (Am-1b and CyD-1b, respectively by attaching fluorescent π-conjugated units on their side chains. Their recognition abilities toward chiral analytes containing a nitrophenyl unit were evaluated by measuring the enantioselective fluorescence quenching behavior. Both sensors showed the same degree of enantioselective fluorescence response for various aromatic nitro compounds. However, in some cases, their enantioselectivities were different depending on the analytes. The difference in the chiral recognition abilities between Am-1b and CyD-1b seems to be based on the structural difference of their inherent backbones, that is, the one-handed helical structure and cyclic structure, respectively. The study on the resolution ability of the Am-1b-based CSP revealed that the terthienyl-based pendant of Am-1b provides not only a fluorescent functionality but also a different chiral recognition site from that of amylose tris(phenylcarbamate.

  18. Evaluation of Different Analysis Methods for the Encapsulation Efficiency of Amylose Inclusion Compound

    Directory of Open Access Journals (Sweden)

    Tao Feng

    2015-01-01

    Full Text Available Recently amylose has drawn much attention as a potential vehicle for the nanoencapsulation of different flavor molecules, and the encapsulation efficiency of the complex is an important index for the evaluation of its embedding effect. In this study, three different methods for assessing encapsulation efficiency of amylose-flavor complexes were compared. We chose heptanol and menthone as the flavor molecules, as both of them exhibit a typical odor. The complexes were prepared by the melting method, and their structures were characterized by XRD. In addition, the encapsulation efficiency was determined by thermal gravimetric analysis (TGA, potentiometric titration (PT, and headspace solid phase microextraction gas chromatography (HS-SPME-GC, respectively. The results showed that PT results were within the reported literature range while HS-SPME-GC seemed to overestimate the results and TGA results were the lowest. What is more, the operations of TGA and PT were relatively simple and the results were reproducible, while the HS-SPME-GC method displayed excellent high sensitivity. Therefore, PT method is the best method for assessing encapsulation efficiency of amylose-flavor complexes.

  19. High content analysis in amyotrophic lateral sclerosis.

    Science.gov (United States)

    Rinaldi, Federica; Motti, Dario; Ferraiuolo, Laura; Kaspar, Brian K

    2017-04-01

    Amyotrophic lateral sclerosis (ALS) is a devastating disease characterized by the progressive loss of motor neurons. Neurons, astrocytes, oligodendrocytes and microglial cells all undergo pathological modifications in the onset and progression of ALS. A number of genes involved in the etiopathology of the disease have been identified, but a complete understanding of the molecular mechanisms of ALS has yet to be determined. Currently, people affected by ALS have a life expectancy of only two to five years from diagnosis. The search for a treatment has been slow and mostly unsuccessful, leaving patients in desperate need of better therapies. Until recently, most pre-clinical studies utilized the available ALS animal models. In the past years, the development of new protocols for isolation of patient cells and differentiation into relevant cell types has provided new tools to model ALS, potentially more relevant to the disease itself as they directly come from patients. The use of stem cells is showing promise to facilitate ALS research by expanding our understanding of the disease and help to identify potential new therapeutic targets and therapies to help patients. Advancements in high content analysis (HCA) have the power to contribute to move ALS research forward by combining automated image acquisition along with digital image analysis. With modern HCA machines it is possible, in a period of just a few hours, to observe changes in morphology and survival of cells, under the stimulation of hundreds, if not thousands of drugs and compounds. In this article, we will summarize the major molecular and cellular hallmarks of ALS, describe the advancements provided by the in vitro models developed in the last few years, and review the studies that have applied HCA to the ALS field to date. Copyright © 2016 Elsevier Inc. All rights reserved.

  20. V-amylose structural characteristics, methods of preparation, significance, and potential applications

    CSIR Research Space (South Africa)

    Obiro, WC

    2012-02-01

    Full Text Available , and postprandial hyperglycaemia in diabetics. Various aspects of V-amylose structure, methods of preparation, factors that affect its formation, and the significance and potential applications of the V-amylose complexes are reviewed....

  1. Development and evaluation of methods for starch dissolution using asymmetrical flow field-flow fractionation. Part II: Dissolution of amylose.

    Science.gov (United States)

    Perez-Rea, Daysi; Bergenståhl, Björn; Nilsson, Lars

    2016-02-01

    In this paper, we investigate whether dissolution in water under autoclaving conditions (140 °C, 20 min) or in dimethyl sulfoxide, DMSO (100 °C, 1 h), is preferable for characterization of amylose. Two types of amylose, potato and maize, were dissolved either in water using an autoclave or in DMSO. On the aqueous solutions obtained, the extent of molecular dissolution of the sample (referred to as the dissolution yield) was determined by enzymatic analysis as well as the molecular properties, such as molar mass and root-mean-square radius, obtained with asymmetrical flow field-flow fractionation coupled to multi-angle light scattering and differential refractive index detection (AF4-MALS-dRI). The results showed that both dissolution methods are efficient at dissolving amylose. However, AF4-MALS-dRI analysis revealed substantial differences. Amylose aqueous solutions obtained by dissolution in DMSO were relatively stable over time, but the dissolution method in autoclave caused some degradation of the molecules, and their solutions display a high tendency to retrograde.

  2. Growth, Feed Utilization and Blood Metabolic Responses to Different Amylose-amylopectin Ratio Fed Diets in Tilapia (Oreochromis niloticus).

    Science.gov (United States)

    Chen, Meng-Yao; Ye, Ji-Dan; Yang, Wei; Wang, Kun

    2013-08-01

    A feeding trial was conducted in tilapia to determine the growth performance, nutrient digestibility, digestive enzymes, and postprandial blood metabolites in response to different dietary amylose-amylopectin ratios. Five isonitrogenous and isolipidic diets containing an equal starch level with different amylose-amylopectin ratios of 0.11 (diet 1), 0.24 (diet 2), 0.47 (diet 3), 0.76 (diet 4) and 0.98 (diet 5) were formulated using high-amylose corn starch (as the amylose source) and waxy rice (as the amylopectin source). Each diet was hand-fed to six tanks of 15 fish each, three times a day over a 6-wk period. After the growth trial, a postprandial blood metabolic test was carried out. Fish fed diet 2 exhibited the highest percent weight gain and feed efficiency and protein efficiency ratio, whereas fish fed with diet 5 showed the lowest growth and feed utilization among treatments. The digestibility for starch in fish fed diet 1 and 2 was higher than those in fish fed with other diets (pdietary treatments, while the lowest values for these indexes were observed in fish fed the diet 3, diet 5 and diet 4, respectively. The liver glycogen concentrations in fish fed diets 4 and 5 were found higher than in fish fed other diets (pacid time was observed in fish fed with the diets 1 or 2. The lowest peak values for each of the three blood metabolites were observed in fish fed diet 5. The results indicate that high-dietary amylose-amylopectin ratio could compromise growth, but help in reducing the blood glucose stress on fish caused by postprandial starch load.

  3. Effects of molecular characteristics of on konjac glucomannan glass transitions of potato amylose, amylopection and their mixtures.

    Science.gov (United States)

    Guo, Li; Liang, Qin; Du, Xianfeng

    2011-03-15

    The purpose of this study was to explore further the functions of konjac glucomannan (KGM) in starch-based foods. Experiments were carried out using the mixed amylose/amylopectin/KGM system as a model. High-speed differential scanning calorimetry (hyper-DSC) with the support of high-performance size exclusion chromatography (HPSEC) equipped with multi-angle laser light scattering (MALLS) and differential refractive index (RI), X-ray diffractometry (XRD) and viscosimetry was used to investigate the effects of KGM on glass transition temperatures (T(g) s) of mixtures with different amylose/amylopectin ratios. Hyper-DSC results showed that the T(g) s of amylose, amylopection and their mixtures decreased with increasing concentration of KGM. Based on the molecular characteristics of KGM, HPSEC-MALLS-RI, viscosimetry and XRD results showed that the molar masses of KGM ranged from 1.023 × 10(6) to 1.329 × 10(6) g mol(-1) ; the root mean square (RMS) radii were distributed from 110.5 to 129.6 nm, and M(w) /M(n) was 1.017. KGM was a linear molecule with random-coil conformation in solution and the crystallinity was 0.00%. It is suggested that the addition of KGM has plasticizing effects on the structures of amylose and amylopectin, which can increase free volume and molecular movement of amylose and amylopectin chains, resulting in a decrease in their T(g) s. Copyright © 2010 Society of Chemical Industry.

  4. Relationship of Rice Grain Amylose, Gelatinization Temperature and Pasting Properties for Breeding Better Eating and Cooking Quality of Rice Varieties.

    Science.gov (United States)

    Pang, Yunlong; Ali, Jauhar; Wang, Xiaoqian; Franje, Neil Johann; Revilleza, Jastin Edrian; Xu, Jianlong; Li, Zhikang

    2016-01-01

    A total of 787 non-waxy rice lines- 116 hybrids and 671 inbreds-were used to study the apparent amylose content (AAC), gelatinization temperature (GT), and rapid visco analyzer (RVA) pasting viscosity properties of rice starch to understand their importance in breeding better rice varieties. The investigated traits showed a wide range of diversity for both hybrid (HG) and inbred (IG) groups. The combinations of the different categories of AAC and GT were random in HG but were non-random in IG. For inbred lines, the high level of AAC tended to combine with the low level of GT, the intermediate level of AAC tended to have high or intermediate GT, and the low level of AAC tended to have high or low GT. Some stable correlations of the AAC, GT, and RVA properties may be the results derived from the physicochemical relationships among these traits, which rice breeders could utilize for selection in advanced breeding generations. Through cluster analysis, IG and HG were divided into 52 and 31 sub-clusters, respectively. Identifying the cultivars having AAC, GT, and RVA properties similar to that of popular high-quality rice varieties seems to be an interesting strategy and could be directly used for adaptation trials to breed high-quality rice varieties in targeted areas in a more customized manner.

  5. THE EFFECTS OF MILLING DEGREE AND TYPE OF BAG ON FUNGAL INFECTION AND SOME CHEMICAL CONTENTS OF STORED MILLED RICE

    Directory of Open Access Journals (Sweden)

    OKKY SETYAWATI DHARMAPUTRA

    1997-01-01

    that in polypropylene bag, but based on chemical analysis the difference was not significant. Based on statistical analyses, correlation between the m.c. and total lipid content with total fungal population was positive. There was no correlation between glucose, amylose and protein contents with total fungal population. Rice with high milling degree can be stored safely for long period, but it has low chemical (nutritional contents

  6. The effects of amylose and starch phosphate on starch gel retrogradation studied by low-field 1H NMR relaxometry

    DEFF Research Database (Denmark)

    Thygesen, Lisbeth Garbrecht; Blennow, A.; Engelsen, S. B.

    2003-01-01

    ) relaxation curves from the two measurements (day 1 and day 7) could be used as a simple, illustrative way of describing the retrogradation. Three different behaviours were identified: One group of samples (mostly potato starches) slowly changed from a soft to a more rigid gel from day 1 to 7. A second group...... (mostly cereal starches) formed a rigid gel already before the first measurement and changed little after that. A third group comprised a few samples containing little or no amylose aged similarly to the first group of samples, but at a much slower rate. For the potato starches, a weak negative......Low-field Nuclear Magnetic Resonance (23 MHz) was used to study the effects of the degree of phosphorylation, the amylose content and the amylopectin chain length distribution on gel retrogradation for a set of 26 starches, six of which were of crystal polymorph type A, 18 of type B and two of type...

  7. Host-guest interactions in amylose inclusion complexes: photochemistry of surfactant stilbenes in helical cavities of amylose

    Energy Technology Data Exchange (ETDEWEB)

    Hui, Y.; Russell, J.C.; Whitten, D.G.

    1983-03-09

    A series of substituted stilbenes, S/sub n/, in which the stilbene chromophore is incorporated into a surfactant molecule, has been synthesized. It has been found that these stilbenes are sensitive structural probes for organized media. The behavior of three of the surfactant stiblenes in the presence of amylose in aqueous dimethyl sulfoxide is described. The results reveal several interesting features of amylose host-guest interaction, including a clear indication that, at least for the stilbenes, the guest is held in a reasonably constrained site similar to that provided by various bilayer structures.

  8. Assessment of the influence of amylose-LPC complexation on the extent of wheat starch digestibility by size-exclusion chromatography.

    Science.gov (United States)

    Ahmadi-Abhari, S; Woortman, A J J; Hamer, R J; Loos, K

    2013-12-15

    Amylose forms inclusion complexes with lysophosphatidylcholine (LPC), that decrease the susceptibility of amylose to amylase degradation. This study on the influence of complexation on starch susceptibility to amylase explains the nature of this protective effect. Wheat starch suspensions (9% w/w) containing 0.5-5% LPC were subjected to hydrolysis by porcine pancreatic α-amylase at 37 °C for several digestion times. The digesta were analysed by size-exclusion chromatography (SEC). The molar mass distribution was closely dependent on the digestion time and amount of LPC. This study precisely demonstrates the alteration of the digestion profile of starch on a molecular level, influenced by amylose-LPC complexation; however the effect depends on the digestion time. During 15 and 30 min digestion, inclusion complexes not only protect amylopectin in the initial hydrolysis stage, but also demonstrate lower susceptibility of the molecular amylose complexes to amylase hydrolysis. Digestion for 240 min resulted in a lower oligosaccharide peak concentration, in the presence of a high LPC concentration, which is related to less degradation of complexed amylose fraction.

  9. Cast Iron With High Carbon Content

    Science.gov (United States)

    Curreri, P. A.; Hendrix, J. C.; Stefanescu, D. M.

    1986-01-01

    Method proposed for solidifying high-carbon cast iron without carbon particles segregating at upper surface. Solidification carried out in low gravity, for example on airplane flying free-fall parabolic trajectory. Many different microstructures obtained by proposed technique, and percentage by weight of carbon retained in melt much higher than at present.

  10. Systems Genetics Identifies a Novel Regulatory Domain of Amylose Synthesis1[OPEN

    Science.gov (United States)

    Parween, Sabiha; Samson, Irene; de Guzman, Krishna; Alhambra, Crisline Mae; Misra, Gopal

    2017-01-01

    A deeper understanding of the regulation of starch biosynthesis in rice (Oryza sativa) endosperm is crucial in tailoring digestibility without sacrificing grain quality. In this study, significant association peaks on chromosomes 6 and 7 were identified through a genomewide association study (GWAS) of debranched starch structure from grains of a 320 indica rice diversity panel using genotyping data from the high-density rice array. A systems genetics approach that interrelates starch structure data from GWAS to functional pathways from a gene regulatory network identified known genes with high correlation to the proportion of amylose and amylopectin. An SNP in the promoter region of Granule Bound Starch Synthase I was identified along with seven other SNPs to form haplotypes that discriminate samples into different phenotypic ranges of amylose. A GWAS peak on chromosome 7 between LOC_Os07g11020 and LOC_Os07g11520 indexed by a nonsynonymous SNP mutation on exon 5 of a bHLH transcription factor was found to elevate the proportion of amylose at the expense of reduced short-chain amylopectin. Linking starch structure with starch digestibility by determining the kinetics of cooked grain amylolysis of selected haplotypes revealed strong association of starch structure with estimated digestibility kinetics. Combining all results from grain quality genomics, systems genetics, and digestibility phenotyping, we propose target haplotypes for fine-tuning starch structure in rice through marker-assisted breeding that can be used to alter the digestibility of rice grain, thus offering rice consumers a new diet-based intervention to mitigate the impact of nutrition-related noncommunicable diseases. PMID:27881726

  11. Correlation of Plant Morphological and Grain Quality Traits with Mineral Element Contents in Yunnan Rice

    Institute of Scientific and Technical Information of China (English)

    ZENG Ya-wen; SHEN Shi-quan; WANG Lu-xiang; LIU Jia-fu; PU Xiao-ying; DU Juan; QIU Min

    2005-01-01

    Correlations between four grain quality, 24 plant morphological traits and eight element contents of 653 accessions fromYunnan rice were analyzed. P, K, Ca and Mg contents of core collection were closely correlated to the most plant morphologicaland grain quality traits, and there were highly significant correlations (P <0.01) among some traits including P content to number ofstems and tillers, K content and amylose content, Ca content and plant height, Mg content and protein content. Mn, Zn, Cu and Fecontents of core collection were closely related to a few traits, such as Fe content and gel consistency (-0.1121 **), Zn content andseed setting rate (-0.1411 **), Cu content and number of grains per panicle (-0.1398**), Mn content and plant height (-0.2492**).

  12. Chiral Separation of Novel a-Aminophosphonates Containing a Benzothiazole Moiety by Liquid Chromatography Using an Amylose Stationary Phase

    Institute of Scientific and Technical Information of China (English)

    LU Ping; ZHANG Yu-Ping; SONG Bao-An; YANG Song; BHADURY Shankar Pinaki; HU De-Yu; XUE Wei; CHEN Zhuo; JIN Lin-Hong

    2008-01-01

    The present report describes a chiral HPLC method for the enantiomeric separation of a-aminophosphonate derivatives using two new coated and immobilized amylose-based chiral stationary phases (CSP,Chiralpak IA and Chiralpak AD-H).The chromatographic parameters such as retention factor (k),separation factor (a),and resolution (Rs) of the solutes were investigated on these two CSPs.Reasonably good baseline separation for these compounds was achieved using Chiralpak IA column.The influences of temperature,content of ethanol modifier and the structure of analyte were also studied.THF,EtOAc and CH2Cl2 were used as ehients on analytical and semi-preparative columns.Highly enriched enantiomers with purities of up to 96.4%--100% (ee) and yields of 90.2%--95.5% were obtained,respectively.The proposed methods were found to be suitable and accurate for rapid separation and semi-preparation of enantiomeric a-aminophosphonate derivatives available.

  13. Quantification of amylose, amylopectin and β-glucan in the search for genes controlling the three major quality traits in barley using genome-wide association studies

    Directory of Open Access Journals (Sweden)

    Soren K Rasmussen

    2014-05-01

    Full Text Available Genome-wide association studies (GWAS for amylose, amylopectin and β-glucan concentration in a collection of 254 European spring barley varieties allowed to identify 20, 17 and 21 single nucleotide polymorphic (SNP markers, respectively, associated with these important grain quality traits. Negative correlations between the content of amylose and β-glucan (R=-0.62, P<0.01 and amylopectin and β-glucan (R= -0.487, P<0.01 were found in this large collection of spring barley varieties. Besides HvCslF6, amo1 and AGPL2, sex6 and waxy were identified among the major genes responsible for β-glucan, amylose and amylopectin content, respectively. Several minor genes like HvGSL4, HvGSL3 and HvCesA6, PWD were also detected by GWAS for the first time. Furthermore, the gene encoding β-fructofuranosidase, located on the short arm of chromosome 7H at 1.49cM, and SRF6, encoding ‘leucine-rich repeat receptor kinase protein’ on chromosome 2H, are proposed to be new candidate genes for amylopectin formation in barley endosperm. Several of the associated SNPs on chromosome 1H, 5H, 6H and 7H mapped to overlapping regions containing QTLs and genes controlling the three grain constituents. In particular chromosomes 5H and 7H carry many QTLs controlling barley grain quality. Amylose, amylopectin and β-glucan were interacted among each other through a metabolic network connected by UDP showing pleiotropic effects. Taken together, these results showed that cereal quality traits related each other and regulated through an interaction network, the identified major genes and genetic regions for amylose, amylopectin and β-glucan is a helpful for further research on carbohydrates and barley breeding.

  14. Amylose and Amylopectin Influence on Liquor Production%直支链淀粉对白酒生产的影响

    Institute of Scientific and Technical Information of China (English)

    李秋涛; 练顺才; 常亮; 廖勤俭; 叶华夏; 李杨华

    2013-01-01

    本文比较了不同直支链淀粉含量的大米、高粱的糊化情况和蒸煮香气,并进行了实验室和窖池发酵试验。结果发现酿酒微生物代谢出的酶既能水解支链淀粉也能水解直链淀粉;同一品种的粮食直链淀粉越高,淀粉结构越紧密,糊化时间越长,粮香越浓;不同品种的粮食淀粉颗粒大小、结构不同,糊化时间也不同。不管是直链淀粉还是支链淀粉,只要糊化得好,出酒率差别不大。%In this paper, by comparing different amylose and amylopectin starch content of pasting and cooking fragrance of rice, sorghum, and pits fermentation test lab. Found that wine out of microbial metabolism enzyme can hydrolysis of starch hydrolysis can also amylose; The same varieties of grain amylose is higher , the closer starch structure, gelatinization, the longer food is sweet grows; Different varieties of starch grain size, grain structure, gelatinization time is also different. Both amylose and amylopectin, well as long as gelatinization, liquor yield.

  15. Synthesis and characterization of amylose grafted poly(acrylic acid) and its application in ammonia adsorption.

    Science.gov (United States)

    Chen, Qing; Yu, Haojie; Wang, Li; Abdin, Zain-Ul; Yang, Xinpeng; Wang, Junhua; Zhou, Weidong; Zhang, Hongtao; Chen, Xiao

    2016-11-20

    Amylose grafted poly(acrylic acid) (Am-g-PAA) was synthesized by graft copolymerization of amylose with acrylic acid. The structure of Am-g-PAA was confirmed by (1)H NMR and FT-IR spectra. The morphology, crystallinity and thermal properties of amylose and Am-g-PAA were investigated by SEM, XRD and TGA, respectively. The highest degree of substitution (DS) of carboxyl group was 1.96 which was obtained after reacted for 1h at 60°C. Acrylic acid to anhydroglucose mole ratio for DS was 19.81. It was found that a large number of carboxyl groups were grafted on the backbone of amylose. It was also found that ammonia adsorption capacity of amylose increased by grafting poly(acrylic acid) on the backbone of amylose.

  16. Amylose recognition and ring-size determination of amylomaltase

    Science.gov (United States)

    Roth, Christian; Weizenmann, Nicole; Bexten, Nicola; Saenger, Wolfram; Zimmermann, Wolfgang; Maier, Timm; Sträter, Norbert

    2017-01-01

    Starch is a major carbon and energy source throughout all kingdoms of life. It consists of two carbohydrate polymers, branched amylopectin and linear amylose, which are sparingly soluble in water. Hence, the enzymatic breakdown by glycoside hydrolases (GHs) is of great biological and societal importance. Amylomaltases (AMs) are GHs specialized in the hydrolysis of α-1,4–linked sugar chains such as amylose. They are able to catalyze an intramolecular transglycosylation of a bound sugar chain yielding polymeric sugar rings, the cycloamyloses (CAs), consisting of 20 to 100 glucose units. Despite a wealth of data on short oligosaccharide binding to GHs, no structural evidence is available for their interaction with polymeric substrates that better represent the natural polysaccharide. We have determined the crystal structure of Thermus aquaticus AM in complex with a 34-meric CA—one of the largest carbohydrates resolved by x-ray crystallography and a mimic of the natural polymeric amylose substrate. In total, 15 glucose residues interact with the protein in an extended crevice with a length of more than 40 Å. A modified succinimide, derived from aspartate, mediates protein-sugar interactions, suggesting a biological role for this nonstandard amino acid. The structure, together with functional assays, provides unique insights into the interaction of GHs with their polymeric substrate and reveals a molecular ruler mechanism for minimal ring-size determination of CA products. PMID:28097217

  17. AFM images of complexes between amylose and Aspergillus niger glucoamylase mutants, native and mutant starch binding domains: a model for the action of glucoamylase

    DEFF Research Database (Denmark)

    Morris, V. M.; Gunning, A. P.; Faults, C. B.

    2005-01-01

    Atomic force microscopy has been used to investigate the complexes formed between high molecular weight amylose chains and Aspergillus niger glucoamylase mutants (E400Q and W52F), wild-type A. niger starch binding domains (SBDS), and mutant SBDs (W563K and W590K) lacking either of the two starch ...

  18. High throughput screening of starch structures using carbohydrate microarrays

    DEFF Research Database (Denmark)

    Tanackovic, Vanja; Rydahl, Maja Gro; Pedersen, Henriette Lodberg

    2016-01-01

    In this study we introduce the starch-recognising carbohydrate binding module family 20 (CBM20) from Aspergillus niger for screening biological variations in starch molecular structure using high throughput carbohydrate microarray technology. Defined linear, branched and phosphorylated...... maltooligosaccharides, pure starch samples including a variety of different structures with variations in the amylopectin branching pattern, amylose content and phosphate content, enzymatically modified starches and glycogen were included. Using this technique, different important structures, including amylose content...... and branching degrees could be differentiated in a high throughput fashion. The screening method was validated using transgenic barley grain analysed during development and subjected to germination. Typically, extreme branching or linearity were detected less than normal starch structures. The method offers...

  19. The aluminium content of infant formulas remains too high

    OpenAIRE

    2013-01-01

    Background Recent research published in this journal highlighted the issue of the high content of aluminium in infant formulas. The expectation was that the findings would serve as a catalyst for manufacturers to address a significant problem of these, often necessary, components of infant nutrition. It is critically important that parents and other users have confidence in the safety of infant formulas and that they have reliable information to use in choosing a product with a lower content ...

  20. Growth, Feed Utilization and Blood Metabolic Responses to Different Amylose-amylopectin Ratio Fed Diets in Tilapia (

    Directory of Open Access Journals (Sweden)

    Meng-Yao Chen

    2013-08-01

    Full Text Available A feeding trial was conducted in tilapia to determine the growth performance, nutrient digestibility, digestive enzymes, and postprandial blood metabolites in response to different dietary amylose-amylopectin ratios. Five isonitrogenous and isolipidic diets containing an equal starch level with different amylose-amylopectin ratios of 0.11 (diet 1, 0.24 (diet 2, 0.47 (diet 3, 0.76 (diet 4 and 0.98 (diet 5 were formulated using high-amylose corn starch (as the amylose source and waxy rice (as the amylopectin source. Each diet was hand-fed to six tanks of 15 fish each, three times a day over a 6-wk period. After the growth trial, a postprandial blood metabolic test was carried out. Fish fed diet 2 exhibited the highest percent weight gain and feed efficiency and protein efficiency ratio, whereas fish fed with diet 5 showed the lowest growth and feed utilization among treatments. The digestibility for starch in fish fed diet 1 and 2 was higher than those in fish fed with other diets (p<0.05. The highest activities for protease, lipase and amylase were found in fish fed the diet 2, diet 1, and diet 1 respectively among dietary treatments, while the lowest values for these indexes were observed in fish fed the diet 3, diet 5 and diet 4, respectively. The liver glycogen concentrations in fish fed diets 4 and 5 were found higher than in fish fed other diets (p<0.05. The feeding rate, hepatosomatic index, condition factor, and plasma parmeters (glucose, triglyceride, total cholesterol, high-density lipoprotein cholesterol, and low-density lipoprotein cholesterol did not differ across treatments. In terms of postprandial blood responses, peak blood glucose and triglycerides were lower after 3 or 6 h in the fish fed with diets 3–5 than in the fish fed diet 1, but delayed peak blood total amino acid time was observed in fish fed with the diets 1 or 2. The lowest peak values for each of the three blood metabolites were observed in fish fed diet 5. The

  1. Assessing the susceptibility of amylose-lysophosphatidylcholine complexes to amylase by the use of iodine

    NARCIS (Netherlands)

    Ahmadiabhari, Salomeh; Woortman, Albert J. J.; Hamer, Rob J.; Loos, Katja

    2014-01-01

    The formation of amylose-lysophosphatidylcholine (LPC) inclusion complexes renders amylose less susceptible to amylase digestion. In order to better understand this phenomenon on a structural level, the complexation of 9% wheat starch suspensions with 0, 2, 3, and 5% exogenous LPC was developed in R

  2. Facile Synthesis and Structural Characterization of Amylose-Fatty Acid Inclusion Complexes

    NARCIS (Netherlands)

    Cao, Zheng; Woortman, Albert; Rudolf, Petra; Loos, Katja

    2015-01-01

    Amylose-fatty acid inclusion complexes can be easily prepared by simple mixing in hot aqueous solutions. Above a critical chain length (C6) of the fatty acid insoluble complexes between amylose and each fatty acid (C8, C10, C12, C14, C16) were precipitated from the solution, and characterized by FT-

  3. The effect of temperature and time on the formation of amylose- lysophosphatidylcholine inclusion complexes

    NARCIS (Netherlands)

    Ahmadiabhari, Salomeh; Woortman, Albert J. J.; Oudhuis, A. A. C. M. (Lizette); Hamer, Rob J.; Loos, Katja

    The formation of amylose inclusion complexes could help to decrease the susceptibility of starch granules against amylase digestion. We studied the formation of amylose-lysophosphatidylcholine (LPC) inclusion complexes at temperatures at and below the gelatinization temperature of starch, using DSC,

  4. Synthesis, characterization, and comparative analysis of amylose-guest complexes prepared by microwave irradiation.

    Science.gov (United States)

    Ryno, Lisa M; Levine, Yael; Iovine, Peter M

    2014-01-13

    The preparation and characterization of amylose-small molecule complexes is a heavily researched area. There are few reports, however, that compare complexation efficiencies across a matrix of different amylose hosts and guests. We present herein a detailed account of using microwave irradiation to prepare amylose-small molecule complexes in water. Microwave heating reduced the time required to prepare these amylose complexes from hours to minutes. We characterized not only the quantity of complex for each amylose-guest pairing but also the loading of small molecule guest in that complex. Amylose-1-naphthol complexes were found to have the highest loading density compared with other hydrophobic guests studied; in the case of 1-naphthol, there was a linear dependence of guest loading on amylose molecular weight. In addition, complexes featuring 1-naphthol were the most ordered as judged by powder X-ray diffraction (XRD) and differential scanning calorimetry. Further, powder XRD analysis of the microwave-prepared complexes revealed that many contained mixtures of V-form (single helix) and B-form (double helical) amylose. Lastly, untreated Hylon VII complexed the widest variety of small molecules with the overall greatest efficiency.

  5. Morphological characteristics, oxidative stability and enzymic hydrolysis of amylose-fatty acid complexes.

    Science.gov (United States)

    Marinopoulou, Anna; Papastergiadis, Efthimios; Raphaelides, Stylianos N; Kontominas, Michael G

    2016-05-05

    Complexes of amylose with fatty acids varying in carbon chain length and degree of unsaturation were prepared at 30, 50 or 70°C by dissolving amylose in 0.1N KOH and mixing with fatty acid potassium soap solution. The complexes were obtained in solid form as precipitates after neutralization. SEM microscopy revealed that the morphology of the complexes was that of ordered lamellae separated from amorphous regions whereas confocal laser scanning microscopy showed images of the topography of the guest molecules in the complex matrix. FTIR spectroscopy revealed that the absorption peak attributed to carbonyl group of free fatty acid was shifted when the fatty acid was in the form of amylose complex. Thermo-gravimetry showed that the unsaturated fatty acids were effectively protected from oxidation when they were complexed with amylose whereas enzymic hydrolysis experiments showed that the guest molecules were quantitatively released from the amylose complexes.

  6. Shedding light on filovirus infection with high-content imaging.

    Science.gov (United States)

    Pegoraro, Gianluca; Bavari, Sina; Panchal, Rekha G

    2012-08-01

    Microscopy has been instrumental in the discovery and characterization of microorganisms. Major advances in high-throughput fluorescence microscopy and automated, high-content image analysis tools are paving the way to the systematic and quantitative study of the molecular properties of cellular systems, both at the population and at the single-cell level. High-Content Imaging (HCI) has been used to characterize host-virus interactions in genome-wide reverse genetic screens and to identify novel cellular factors implicated in the binding, entry, replication and egress of several pathogenic viruses. Here we present an overview of the most significant applications of HCI in the context of the cell biology of filovirus infection. HCI assays have been recently implemented to quantitatively study filoviruses in cell culture, employing either infectious viruses in a BSL-4 environment or surrogate genetic systems in a BSL-2 environment. These assays are becoming instrumental for small molecule and siRNA screens aimed at the discovery of both cellular therapeutic targets and of compounds with anti-viral properties. We discuss the current practical constraints limiting the implementation of high-throughput biology in a BSL-4 environment, and propose possible solutions to safely perform high-content, high-throughput filovirus infection assays. Finally, we discuss possible novel applications of HCI in the context of filovirus research with particular emphasis on the identification of possible cellular biomarkers of virus infection.

  7. Shedding Light on Filovirus Infection with High-Content Imaging

    Directory of Open Access Journals (Sweden)

    Rekha G. Panchal

    2012-08-01

    Full Text Available Microscopy has been instrumental in the discovery and characterization of microorganisms. Major advances in high-throughput fluorescence microscopy and automated, high-content image analysis tools are paving the way to the systematic and quantitative study of the molecular properties of cellular systems, both at the population and at the single-cell level. High-Content Imaging (HCI has been used to characterize host-virus interactions in genome-wide reverse genetic screens and to identify novel cellular factors implicated in the binding, entry, replication and egress of several pathogenic viruses. Here we present an overview of the most significant applications of HCI in the context of the cell biology of filovirus infection. HCI assays have been recently implemented to quantitatively study filoviruses in cell culture, employing either infectious viruses in a BSL-4 environment or surrogate genetic systems in a BSL-2 environment. These assays are becoming instrumental for small molecule and siRNA screens aimed at the discovery of both cellular therapeutic targets and of compounds with anti-viral properties. We discuss the current practical constraints limiting the implementation of high-throughput biology in a BSL-4 environment, and propose possible solutions to safely perform high-content, high-throughput filovirus infection assays. Finally, we discuss possible novel applications of HCI in the context of filovirus research with particular emphasis on the identification of possible cellular biomarkers of virus infection.

  8. EFFECT OF CARBON CONTENT ON MICROSTRUCTURE AND PROPERTIES OF HIGH STRENGTH AND HIGH ELONGATION STEELS

    Institute of Scientific and Technical Information of China (English)

    Y.Chen; X.Chen; 等

    2003-01-01

    The microstructure and mechanical properties of new kind of hot-rolled high strength and high elongation steels with retained austenite were studied by discussing the in-fluence of different carbon content.The research results indicate that carbon content has a significant effect on retaining austenite and consequently resulting in high elon-gation.Besides,new findings about relationship between carbon content and retained austenite as well as properties were discussed in the paper.

  9. Evaluation of dissolution rate on high plutonium content MOX fuel

    Energy Technology Data Exchange (ETDEWEB)

    Sugaya, Shinichi; Kurita, Ichiro; Endo, Hideo; Higuchi, Hidetoshi; Kihara, Yoshiyuki [Japan Nuclear Cycle Development Inst., Tokai Works, Tokai, Ibaraki (Japan); Ogasawara, Masahiro; Shinada, Masanori; Kowata, Masato [Inspection Development Company Ltd., Tokai, Ibaraki (Japan)

    2002-06-01

    The dissolution rate of high Pu content MOX fuel into nitric acid was measured as a function of Pu content. MOX fuel samples, pressed and sintered, were dissolved in 7 M of boiling nitric acid, and the dissolution rate was measured by analyzing the Pu and U concentration in the solution. The dissolution rate of MOX fuel tended to decrease with the increase in the Pu content and was reduced after 6 hours of dissolution. These results agreed well with previous ones, but the dissolution rate was 3-6 times faster than those. It is estimated that the cause of this difference was due to underestimation of the surface area of MOX fuel powder and the difference of the MOX O/M ratio. (author)

  10. Preparation and properties of films cast from mixtures of poly(vinyl alcohol) and submicron particles prepared from amylose-palmitic acid inclusion complexes.

    Science.gov (United States)

    Fanta, George F; Selling, Gordon W; Felker, Frederick C; Kenar, James A

    2015-05-05

    The use of starch in polymer composites for film production has been studied for increasing biodegradability, improving film properties and reducing cost. In this study, submicron particles were prepared from amylose-sodium palmitate complexes both by rapidly cooling jet-cooked starch-palmitic acid mixtures and by acidifying solutions of starch-sodium palmitate complexes. Films were cast containing poly(vinyl alcohol) (PVOH) with up to 50% starch particles. Tensile strength decreased and Young's modulus increased with starch concentration, but percent elongations remained similar to controls regardless of preparation method or starch content. Microscopy showed particulate starch distribution in films made with rapidly cooled starch-palmitic acid particles but smooth, diffuse starch staining with acidified sodium palmitate complexes. The mild effects on tensile properties suggest that submicron starch particles prepared from amylose-palmitic acid complexes provide a useful, commercially viable approach for PVOH film modification.

  11. Developmental toxicity assay using high content screening of zebrafish embryos.

    Science.gov (United States)

    Lantz-McPeak, Susan; Guo, Xiaoqing; Cuevas, Elvis; Dumas, Melanie; Newport, Glenn D; Ali, Syed F; Paule, Merle G; Kanungo, Jyotshna

    2015-03-01

    Typically, time-consuming standard toxicological assays using the zebrafish (Danio rerio) embryo model evaluate mortality and teratogenicity after exposure during the first 2 days post-fertilization. Here we describe an automated image-based high content screening (HCS) assay to identify the teratogenic/embryotoxic potential of compounds in zebrafish embryos in vivo. Automated image acquisition was performed using a high content microscope system. Further automated analysis of embryo length, as a statistically quantifiable endpoint of toxicity, was performed on images post-acquisition. The biological effects of ethanol, nicotine, ketamine, caffeine, dimethyl sulfoxide and temperature on zebrafish embryos were assessed. This automated developmental toxicity assay, based on a growth-retardation endpoint should be suitable for evaluating the effects of potential teratogens and developmental toxicants in a high throughput manner. This approach can significantly expedite the screening of potential teratogens and developmental toxicants, thereby improving the current risk assessment process by decreasing analysis time and required resources.

  12. Enantiomeric separation of iridium (III) complexes using HPLC chiral stationary phases based on amylose derivatives

    Energy Technology Data Exchange (ETDEWEB)

    Kim, Hee Eun; Seo, Na Hyeon; Hyun, Myung Ho [Dept. of Chemistry and Chemistry Institute for Functional Materials, Pusan National University, Busan (Korea, Republic of)

    2016-12-15

    Cyclometalated iridium (III) complexes formed with three identical cyclometalating (C-N) ligands (homoleptic) or formed with two cyclometalating (C-N) ligands and one ancillary (LX) ligand (heteroleptic) have been known as highly phosphorescent materials and, thus, they have been utilized as efficient phosphorescent dopants in organic light emitting diodes (OLEDs) 1–3 or as effective phosphorescent chemosensors. 4–7 Cylometalated iridium (III) complexes are chiral compounds consisting of lambda (Λ, left-handed) and delta (Δ, right-handed) isomers. Racemic cyclometa- lated iridium (III) complexes emit light with no net polarization, but optically active cyclometalated iridium (III) complexes emit circularly polarized light. 8,9 Circularly polarized light can be used in various fields including highly efficient three dimensional electronic devices, photo nic devices for optical data storage, biological assays, and others. 8,9 In order to obtain optically active cylometalated iridium (III) complexes and to determine the enantiomeric composition of optically active cylometalated iridium (III) complexes, liquid chromatogr aphic enantiomer separation method on chiral stationary phases (CSPs) has been used. For example, Okamoto and coworkers first reported the high performance liquid chromatographic (HPLC) direct enantiomeric separation of two homoleptic cylometalated iridium (III) complexes on immobilized amylose tris(3,5- dimethylphenylcarbamate) (Chiralpak IA), coated cellulose tris(3,5-dimethylphenylcarbamate) (Chiralc el OD), and coated cellulose tris(4-methylbenzoate) (Chiralce l OJ). 10 Supercritical fluid chromatography (SFC) was also used by Bernhard and coworkers for the enantiomeric separation of cylometalated iridium (III) complexes on coated amylose tris(3,5-dimethylphenylcarbamate) (Chiralpak AD-H). 8 However, the general use of the HPLC method for the direct enantiomeric separation of homoleptic.

  13. Molecular Dynamics of Materials Possessing High Energy Content.

    Science.gov (United States)

    1988-01-26

    I -RI90 634 MOLECULAR DYNAMICS OF MATERIALS POSSESSING HIGH ENERGY 1/1 r CONTENTCU) COLUMBIA UNIV MENd YORK N J TURRO 26 JAN GO I RFOSR-TR-88-0168...Bolling Air Force Base, D.C. 2 61102F_ 2303 I B2 11 T,TL.E (Inciuoe Security Classification) Molecular Dynamics of Materials Possessing High Energy...York 10027 (212) 280-2175 TITLE: MOLECULAR DYNAMICS OF MATERIALS POSSESSING HIGH ENERGY CONTENT .. 0 0 88 2 ... "" ’% ,i u , . .. .. ....... ŝ" ;! ,i

  14. Information management for high content live cell imaging

    Directory of Open Access Journals (Sweden)

    White Michael RH

    2009-07-01

    Full Text Available Abstract Background High content live cell imaging experiments are able to track the cellular localisation of labelled proteins in multiple live cells over a time course. Experiments using high content live cell imaging will generate multiple large datasets that are often stored in an ad-hoc manner. This hinders identification of previously gathered data that may be relevant to current analyses. Whilst solutions exist for managing image data, they are primarily concerned with storage and retrieval of the images themselves and not the data derived from the images. There is therefore a requirement for an information management solution that facilitates the indexing of experimental metadata and results of high content live cell imaging experiments. Results We have designed and implemented a data model and information management solution for the data gathered through high content live cell imaging experiments. Many of the experiments to be stored measure the translocation of fluorescently labelled proteins from cytoplasm to nucleus in individual cells. The functionality of this database has been enhanced by the addition of an algorithm that automatically annotates results of these experiments with the timings of translocations and periods of any oscillatory translocations as they are uploaded to the repository. Testing has shown the algorithm to perform well with a variety of previously unseen data. Conclusion Our repository is a fully functional example of how high throughput imaging data may be effectively indexed and managed to address the requirements of end users. By implementing the automated analysis of experimental results, we have provided a clear impetus for individuals to ensure that their data forms part of that which is stored in the repository. Although focused on imaging, the solution provided is sufficiently generic to be applied to other functional proteomics and genomics experiments. The software is available from: fhttp://code.google.com/p/livecellim/

  15. Aggressive content of high school students' TV viewing.

    Science.gov (United States)

    Yoon, Jina S; Somers, Cheryl L

    2003-12-01

    The purpose of this study was to examine high school students' exposure to television programming with aggressive content and to explore whether consumption of aggressive TV varied by sex and ethnicity. Participants were 472 boys and girls from two high schools, one urban and one suburban. Definitions of both direct and indirect aggression were used to rate TV programs, and the participants' exposure to both was assessed. Analysis yielded a statistically significant effect for sex but not ethnicity as girls watched more TV programs containing indirect aggression. Also, exposure to aggressive TV content peaked in Grade 10 and fell sharply thereafter. The importance of educating adolescents about the images they view is highlighted. Implications for research are discussed.

  16. Method for creating high carbon content products from biomass oil

    Science.gov (United States)

    Parker, Reginald; Seames, Wayne

    2012-12-18

    In a method for producing high carbon content products from biomass, a biomass oil is added to a cracking reactor vessel. The biomass oil is heated to a temperature ranging from about 100.degree. C. to about 800.degree. C. at a pressure ranging from about vacuum conditions to about 20,700 kPa for a time sufficient to crack the biomass oil. Tar is separated from the cracked biomass oil. The tar is heated to a temperature ranging from about 200.degree. C. to about 1500.degree. C. at a pressure ranging from about vacuum conditions to about 20,700 kPa for a time sufficient to reduce the tar to a high carbon content product containing at least about 50% carbon by weight.

  17. The aluminium content of infant formulas remains too high.

    Science.gov (United States)

    Chuchu, Nancy; Patel, Bhavini; Sebastian, Blaise; Exley, Christopher

    2013-10-08

    Recent research published in this journal highlighted the issue of the high content of aluminium in infant formulas. The expectation was that the findings would serve as a catalyst for manufacturers to address a significant problem of these, often necessary, components of infant nutrition. It is critically important that parents and other users have confidence in the safety of infant formulas and that they have reliable information to use in choosing a product with a lower content of aluminium. Herein, we have significantly extended the scope of the previous research and the aluminium content of 30 of the most widely available and often used infant formulas has been measured. Both ready-to-drink milks and milk powders were subjected to microwave digestion in the presence of 15.8 M HNO3 and 30% w/v H2O2 and the aluminium content of the digests was measured by TH GFAAS. Both ready-to-drink milks and milk powders were contaminated with aluminium. The concentration of aluminium across all milk products ranged from ca 100 to 430 μg/L. The concentration of aluminium in two soya-based milk products was 656 and 756 μg/L. The intake of aluminium from non-soya-based infant formulas varied from ca 100 to 300 μg per day. For soya-based milks it could be as high as 700 μg per day. All 30 infant formulas were contaminated with aluminium. There was no clear evidence that subsequent to the problem of aluminium being highlighted in a previous publication in this journal that contamination had been addressed and reduced. It is the opinion of the authors that regulatory and other non-voluntary methods are now required to reduce the aluminium content of infant formulas and thereby protect infants from chronic exposure to dietary aluminium.

  18. Engineering properties for high kitchen waste content municipal solid waste

    Institute of Scientific and Technical Information of China (English)

    Wu Gao; Yunmin Chen; Liangtong Zhan; Xuecheng Bian

    2015-01-01

    Engineering properties of municipal solid waste (MSW) depend largely on the waste’s initial composition and degree of degradation. MSWs in developing countries usually have a high kitchen waste content (called HKWC MSW). After comparing and analyzing the laboratory and field test results of physical composition, hydraulic properties, gas generation and gas permeability, and mechanical properties for HKWC MSW and low kitchen waste content MSW (called LKWC MSW), the following findings were obtained: (1) HKWC MSW has a higher initial water content (IWC) than LKWC MSW, but the field ca-pacities of decomposed HKWC and LKWC MSWs are similar; (2) the hydraulic conductivity and gas permeability for HKWC MSW are both an order of magnitude smaller than those for LKWC MSW; (3) compared with LKWC MSW, HKWC MSW has a higher landfill gas (LFG) generation rate but a shorter duration and a lower potential capacity; (4) the primary compression feature for decomposed HKWC MSW is similar to that of decomposed LKWC MSW, but the compression induced by degradation of HKWC MSW is greater than that of LKWC MSW; and (5) the shear strength of HKWC MSW changes significantly with time and strain. Based on the differences of engineering properties between these two kinds of MSWs, the geo-environmental issues in HKWC MSW landfills were analyzed, including high leachate production, high leachate mounds, low LFG collection efficiency, large settlement and slope stability problem, and corresponding advice for the management and design of HKWC MSW landfills was recommended.

  19. Liquid alternative diesel fuels with high hydrogen content

    Energy Technology Data Exchange (ETDEWEB)

    Hancsok, Jenoe; Varga, Zoltan; Eller, Zoltan; Poelczmann, Gyoergy [Pannonia Univ., Veszprem (Hungary). MOL Dept. of Hydrocarbon Processing; Kasza, Tamas [MOL Hungarian Oil and Gas Plc., Szazhalombatta (Hungary)

    2013-06-01

    Mobility is a keystone of the sustainable development. In the operation of the vehicles as the tools of mobility internal combustion engines, so thus Diesel engines will play a remarkable role in the next decades. Beside fossil fuels - used for power these engines - liquid alternative fuels have higher and higher importance, because of their known advantages. During the presentation the categorization possibilities based on the chronology of their development and application will be presented. The importance of fuels with high hydrogen content will be reviewed. Research and development activity in the field of such kind of fuels will be presented. During this developed catalytic systems and main performance properties of the product will be presented which were obtained in case of biogasoils produced by special hydrocracking of natural triglycerides and in case of necessity followed by isomerization; furthermore in case of synthetic biogasoils obtained by the isomerization hydrocracking of Fischer-Tropsch paraffins produced from biomass based synthesis gas. Excellent combustion properties (cetane number > 65-75), good cold flow properties and reduced harmful material emission due to the high hydrogen content (C{sub n}H{sub 2n+2}) are highlighted. Finally production possibilities of linear and branched paraffins based on lignocelluloses are briefly reviewed. Summarizing it was concluded that liquid hydrocarbons with high isoparaffin content are the most suitable fuels regarding availability, economical and environmental aspects, namely the sustainable development. (orig.)

  20. Engineering properties for high kitchen waste content municipal solid waste

    Directory of Open Access Journals (Sweden)

    Wu Gao

    2015-12-01

    Full Text Available Engineering properties of municipal solid waste (MSW depend largely on the waste's initial composition and degree of degradation. MSWs in developing countries usually have a high kitchen waste content (called HKWC MSW. After comparing and analyzing the laboratory and field test results of physical composition, hydraulic properties, gas generation and gas permeability, and mechanical properties for HKWC MSW and low kitchen waste content MSW (called LKWC MSW, the following findings were obtained: (1 HKWC MSW has a higher initial water content (IWC than LKWC MSW, but the field capacities of decomposed HKWC and LKWC MSWs are similar; (2 the hydraulic conductivity and gas permeability for HKWC MSW are both an order of magnitude smaller than those for LKWC MSW; (3 compared with LKWC MSW, HKWC MSW has a higher landfill gas (LFG generation rate but a shorter duration and a lower potential capacity; (4 the primary compression feature for decomposed HKWC MSW is similar to that of decomposed LKWC MSW, but the compression induced by degradation of HKWC MSW is greater than that of LKWC MSW; and (5 the shear strength of HKWC MSW changes significantly with time and strain. Based on the differences of engineering properties between these two kinds of MSWs, the geo-environmental issues in HKWC MSW landfills were analyzed, including high leachate production, high leachate mounds, low LFG collection efficiency, large settlement and slope stability problem, and corresponding advice for the management and design of HKWC MSW landfills was recommended.

  1. ‘Hierarchical self-assembly’ of helical amylose/SWNTs complex

    Institute of Scientific and Technical Information of China (English)

    2008-01-01

    Helical amylose/SWNTs complexes (A/S-C) of various sizes, a single nanotube wrapped by amylose in particular, were demonstrated. The formation process of the helical A/S-C was further explained by a novel hierarchical self-assembly model, including the wrapping of amylose chains around SWNT and the hierarchical self-assembly of wrapped-SWNTs into the superstructural A/S-C. Besides the hydrophobic interaction, the hydrogen bonding also plays a certain role in the self-assembly process.

  2. Contents

    Directory of Open Access Journals (Sweden)

    Editor IJRED

    2012-11-01

    Full Text Available International Journal of Renewable Energy Development www.ijred.com Volume 1             Number 3            October 2012                ISSN 2252- 4940   CONTENTS OF ARTICLES page Design and Economic Analysis of a Photovoltaic System: A Case Study 65-73 C.O.C. Oko , E.O. Diemuodeke, N.F. Omunakwe, and E. Nnamdi     Development of Formaldehyde Adsorption using Modified Activated Carbon – A Review 75-80 W.D.P Rengga , M. Sudibandriyo and M. Nasikin     Process Optimization for Ethyl Ester Production in Fixed Bed Reactor Using Calcium Oxide Impregnated Palm Shell Activated Carbon (CaO/PSAC 81-86 A. Buasri , B. Ksapabutr, M. Panapoy and N. Chaiyut     Wind Resource Assessment in Abadan Airport in Iran 87-97 Mojtaba Nedaei       The Energy Processing by Power Electronics and its Impact on Power Quality 99-105 J. E. Rocha and B. W. D. C. Sanchez       First Aspect of Conventional Power System Assessment for High Wind Power Plants Penetration 107-113 A. Merzic , M. Music, and M. Rascic   Experimental Study on the Production of Karanja Oil Methyl Ester and Its Effect on Diesel Engine 115-122 N. Shrivastava,  , S.N. Varma and M. Pandey  

  3. Structure and function of starch and resistant starch from corn with different doses of mutant amylose-extender and floury-1 alleles.

    Science.gov (United States)

    Yao, Ni; Paez, Alix V; White, Pamela J

    2009-03-11

    Four corn types with different doses of mutant amylose-extender (ae) and floury-1 (fl1) alleles, in the endosperm, including no. 1, aeaeae; no. 2, fl1fl1fl1; no. 3, aeaefl1; and no. 4, fl1fl1ae, were developed for use in making Hispanic food products with high resistant starch (RS) content. The RS percentages in the native starch (NS) of 1-4 were 55.2, 1.1, 5.7, and 1.1%, respectively. All NS were evaluated for pasting properties with a rapid viscoanalyzer (RVA) and for thermal properties with a differential scanning calorimeter (DSC). NS 1 had a low peak viscosity (PV) caused by incomplete gelatinization, whereas NS 3 had the greatest PV and breakdown of all four starch types. On the DSC, NS 2 had the lowest onset temperature and greatest enthalpy. NS 1 and 3 had similar onset and peak temperatures, both higher than those of NS 2 and 4. The gel strength of NS heated with a RVA was evaluated by using a texture analyzer immediately after RVA heating (fresh, RVA-F) and after the gel had been stored at 4 degrees C for 10 days (retrograded, RVA-R). NS 1 gel was watery and had the lowest strength (30 g) among starch gel types. NS 3 gel, although exhibiting syneresis, had greater gel strength than NS 2 and 4. The structures of the NS, the RS isolated from the NS (RS-NS), the RS isolated from RVA-F (RS-RVA-F), and the RS isolated from RVA-R (RS-RVA-R) were evaluated by using size exclusion chromatography. NS 1 had a greater percentage of amylose (AM) (58.3%) than the other NS (20.4-26.8%). The RS from all NS types (RS-NS) had a lower percentage of amylopectin (AP) and a greater percentage of low molecular weight (MW) AM than was present in the original NS materials. The RS-RVA-R from all starches had no AP or high MW AM. The percentages of longer chain lengths (DP 35-60) of NS were greater in 1 and 3 than in 2 and 4, and the percentages of smaller chain lengths (DP 10-20) were greater in 2 and 4 than in 1 and 3. In general, NS 3 seemed to have inherited some pasting

  4. Content

    DEFF Research Database (Denmark)

    Keiding, Tina Bering

    Aim, content and methods are fundamental categories of both theoretical and practical general didactics. A quick glance in recent pedagogical literature on higher education, however, reveals a strong preoccupation with methods, i.e. how teaching should be organized socially (Biggs & Tang, 2007......; Race, 2001; Ramsden, 2003). This trend appears closely related to the ‘from-teaching-to-learning’ movement, which has had a strong influence on pedagogy since the early nineties (Keiding, 2007; Terhart, 2003). Another interpretation of the current interest in methodology can be derived from...... for selection of content (Klafki, 1985, 2000; Myhre, 1961; Nielsen, 2006). These attempts all share one feature, which is that criteria for selection of content appear very general and often, more or less explicitly, deal with teaching at the first Bologna-cycle; i.e. schooling at the primary and lower...

  5. Fruit characterization of high oil content avocado varieties

    Directory of Open Access Journals (Sweden)

    Gómez-López Vicente Manuel

    2002-01-01

    Full Text Available To expand the data bank on avocado (Persea americana Mill. varieties all over the world, and to select good varieties for commercial or improving purposes, a partial fruit characterization of 13 high oil content (11.23-18.80% was performed. The chosen varieties are growing in a Venezuelan germplasm bank: Fuerte, Peruano, Lula, Ortega, Red Collinson, Alcemio, Araira 1, Pope, Ettinger, Gripiña 5, Barker, Duke, and Ryan. They were characterized for pulp oil and moisture; weight (whole fruit, seed, pulp and peel; length, width and fruit shape; peel characteristics (roughness, color and hand peeling; and ripeness time. The variety Ryan showed the highest oil content (18.80% and calorific value (191 Kcal/100 g wet flesh. Avocado varieties grown in Venezuela have generally less oil content and are generally lighter than those from other countries. Most of the varieties had low pulp proportion, and were pyriform, with rough green peel and difficult to hand peel. Red Collinson had an uncommon reddish peel. The ripening time was between 4 and 10 days after harvest.

  6. Registration of Durum Wheat Germplasm Lines with Combined Mutations in SBEIIa and SBEIIb Genes Conferring Increased Amylose and Resistant Starch.

    Science.gov (United States)

    Hazard, Brittany; Zhang, Xiaoqin; Naemeh, Mahmoudreza; Dubcovsky, Jorge

    2014-08-25

    Durum wheat [Triticum turgidum L. subsp. durum (Desf.) Husn.], used in pasta, couscous, and flatbread production, is an important source of starch food products worldwide. The amylose portion of the starch forms resistant starch complexes that resist digestion and contribute to dietary fiber. Increasing the amount of amylose and resistant starch in wheat by mutating the STARCH BRANCHING ENZYME II (SBEII) genes has potential to provide human health benefits. Ethyl methane sulfonate mutations in the linked SBEIIa and SBEIIb paralogs were combined on chromosomes 2A (SBEIIa/b-A; Reg. No. GP-968, PI 670159), 2B (SBEIIa/b-B; Reg. No. GP-970, PI 670161), and on both chromosomes (SBEIIa/b-AB; Reg. No. GP-969, PI 670160) in the tetraploid wheat cultivar Kronos, a semidwarf durum wheat cultivar that has high yield potential and excellent pasta quality. These three double and quadruple SBEII-mutant lines were compared with a control sib line with no SBEII mutations in two field locations in California. The SBEIIa/b-AB line with four mutations showed dramatic increases in amylose (average 66%) and resistant starch (average 753%) relative to the control. However, the SBEIIa/b-AB line also showed an average 7% decrease in total starch and an 8% decrease in kernel weight. The release by the University of California-Davis of the durum wheat germplasm combining four SBEIIa and SBEIIb mutations will accelerate the deployment of these mutations in durum wheat breeding programs and the development of durum wheat varieties with increased resistant starch.

  7. EFFECT OF CARBON CONTENT ON MICROSTRUCTURE AND PROPERTIES OF HIGH STRENGTH AND HIGH ELONGATION STEELS

    Institute of Scientific and Technical Information of China (English)

    Y. Chen; X. Chen; P.H. Li; S.K. Pu; Z.X. Yuan; B.F. Xu; D.X. Lou; A.M. Guo; S.B.Zhou

    2003-01-01

    The microstructure and mechanical properties of new kind of hot-rolled high strengthand high elongation steels with retained austenite were studied by discussing the in-fluence of different carbon content. The research results indicate that carbon contenthas a significant effect on retaining austenite and consequently resulting in high elon-gation. Besides, new findings about relationship between carbon content and retainedaustenite as well as properties were discussed in the paper.

  8. Image analysis benchmarking methods for high-content screen design.

    Science.gov (United States)

    Fuller, C J; Straight, A F

    2010-05-01

    The recent development of complex chemical and small interfering RNA (siRNA) collections has enabled large-scale cell-based phenotypic screening. High-content and high-throughput imaging are widely used methods to record phenotypic data after chemical and small interfering RNA treatment, and numerous image processing and analysis methods have been used to quantify these phenotypes. Currently, there are no standardized methods for evaluating the effectiveness of new and existing image processing and analysis tools for an arbitrary screening problem. We generated a series of benchmarking images that represent commonly encountered variation in high-throughput screening data and used these image standards to evaluate the robustness of five different image analysis methods to changes in signal-to-noise ratio, focal plane, cell density and phenotype strength. The analysis methods that were most reliable, in the presence of experimental variation, required few cells to accurately distinguish phenotypic changes between control and experimental data sets. We conclude that by applying these simple benchmarking principles an a priori estimate of the image acquisition requirements for phenotypic analysis can be made before initiating an image-based screen. Application of this benchmarking methodology provides a mechanism to significantly reduce data acquisition and analysis burdens and to improve data quality and information content.

  9. Localization and dynamics of amylose-lipophilic molecules inclusion complex formation in starch granules

    NARCIS (Netherlands)

    Manca, Marianna; Woortman, Albert J. J.; Mura, Andrea; Loos, Katja; Loi, Maria Antonietta

    2015-01-01

    Inclusion complex formation between lipophilic dye molecules and amylose polymers in starch granules is investigated using laser spectroscopy and microscopy. By combining confocal laser scanning microscopy (CLSM) with spatial resolved photoluminescence (PL) spectroscopy, we are able to discriminate

  10. Binding interaction between rice glutelin and amylose: Hydrophobic interaction and conformational changes.

    Science.gov (United States)

    Xu, Xingfeng; Liu, Wei; Zhong, Junzhen; Luo, Liping; Liu, Chengmei; Luo, Shunjing; Chen, Lin

    2015-11-01

    The interaction of rice glutelin (RG) with amylose was characterized by spectroscopic and molecular docking studies. The intrinsic fluorescence of RG increased upon the addition of amylose. The binding sites, binding constant and thermodynamic features indicated that binding process was spontaneous and the main driving force of the interaction was hydrophobic interaction. The surface hydrophobicity of RG decreased with increasing amount of amylose. Furthermore, synchronous fluorescence and circular dichroism (CD) spectra provided data concerning conformational and micro-environmental changes of RG. With the concentration of amylose increasing, the polarity around the tyrosine residues increased while the hydrophobicity decreased. Alteration of protein conformation was observed with increasing of α-helix and reducing of β-sheet. Finally, a visual representation of two binding sites located in the amorphous area of RG was presented by molecular modeling studies.

  11. The effect of temperature and time on the formation of amylose- lysophosphatidylcholine inclusion complexes

    NARCIS (Netherlands)

    Ahmadi-Abhari, S.; Woortman, A.J.J.; Oudhuis, A.A.C.M.; Hamer, R.J.; Loos, K.

    2014-01-01

    The formation of amylose inclusion complexes could help to decrease the susceptibility of starch granules against amylase digestion. We studied the formation of amyloselysophosphatidylcholine (LPC) inclusion complexes at temperatures at and below the gelatinization temperature of starch, using DSC,

  12. New routes to the synthesis of amylose-block-polystyrene rod-coil block copolymers

    NARCIS (Netherlands)

    Loos, Katja; Müller, Axel H.E.

    2002-01-01

    Hybrid block copolymers amylose-block-polystyrene were synthesized by covalent attachment of maltoheptaose derivatives to end-functionalized polystyrene and subsequent enzymatic grafting from polymerization. The maltoheptaose derivatives were attached by reductive amination or hydrosilation to amino

  13. High resolution DNA content measurements of mammalian sperm

    Energy Technology Data Exchange (ETDEWEB)

    Pinkel, D.; Lake, S.; Gledhill, B.L.; Van Dilla, M.A.; Stephenson, D.; Watchmaker, G.

    1982-01-01

    The high condensation and flat shape of the mammalian sperm nucleus present unique difficulties to flow cytometric measurement of DNA content. Chromatin compactness makes quantitative fluorescent staining for DNA difficult and causes a high index of refraction. The refractive index makes optical measurements sensitive to sperm head orientation. We demonstrate that the optical problems can be overcome using the commercial ICP22 epiillumination flow cytometer (Ortho Instruments, Westwood, MA) or a specially built cell orientating flow cytometer (OFCM). The design and operation of the OFCM are described. Measurements of the angular dependence of fluorescence from acriflavine stained rabbit sperm show that it is capable of orienting flat sperm with a tolerance of +-7/sup 0/. Differences in the angular dependence for the similarly shaped bull and rabbit sperm allow discrimination of these cells. We show that DNA staining with 4-6 diamidino-2-phenylindole (DAPI) or an ethidium bromide mithramycin combination allows resolution of the X and Y populations in mouse sperm. They have also been successful with sperm from the bull, ram, rabbit, and boar. Reliable results with human sperm are not obtained. The accuracy of the staining and measurement techniques are verified by the correct determination of the relative content of these two populations in sperm from normal mice and those with the Cattanach (7 to X) translocation. Among the potential uses of these techniques are measurement of DNA content errors induced in sperm due to mutagen exposure, and assessment of the fractions of X and Y sperm in semen that may have one population artifically enriched.

  14. Parameterizing amylose chain-length distributions for biosynthesis-structure-property relations.

    Science.gov (United States)

    Nada, Sharif S; Zou, Wei; Li, Changfeng; Gilbert, Robert G

    2017-09-25

    Amylose, one of the components of starch, is a glucose polymer consisting largely of long, linear chains with a few long-chain branch points. The chain-length (molecular weight) distribution (CLD) of the component chains of amylose can provide information on amylose biosynthesis-structure-property relations, as has been done previously by fitting amylopectin CLDs to a model with physically meaningful parameters. Due to the presence of long chains, the CLD of amylose can currently best be obtained by size-exclusion chromatography, a technique that suffers from band-broadening effects which alter the observed distribution. The features of the multiple regions present in amylose chain-length distributions are also difficult to resolve, an issue that combines with band broadening to compound the difficulty of analysis and subsequent parameterization of the structural characteristics of amylose. A new method is presented to fit these distributions with biologically meaningful parameters in a way that accounts for band broadening. This is achieved by assuming that band broadening takes the form of a simple Gaussian over a relatively small region and that chain stoppage is a random process independent of the length of the substrate chain over the same region; these assumptions are relatively weak and expected to be frequently applicable. The method provides inbuilt consistency tests for its applicability to a given data set and, in cases where it is applicable, allows for the first nonempirical parameterization of amylose biosynthesis-structure-property relations from CLDs by using parameters directly linked to the activities of the enzymes responsible for chain growth and chain stoppage. Graphical abstract Model calculation illustrating the method described and showing the division between the three characteristic regions of a typical amylose chain-length distribution.

  15. Strong and moldable cellulose magnets with high ferrite nanoparticle content.

    Science.gov (United States)

    Galland, Sylvain; Andersson, Richard L; Ström, Valter; Olsson, Richard T; Berglund, Lars A

    2014-11-26

    A major limitation in the development of highly functional hybrid nanocomposites is brittleness and low tensile strength at high inorganic nanoparticle content. Herein, cellulose nanofibers were extracted from wood and individually decorated with cobalt-ferrite nanoparticles and then for the first time molded at low temperature (ferrite and cellulose material. A nanocomposite with 70 wt % ferrite, 20 wt % cellulose nanofibers, and 10 wt % epoxy showed a modulus of 12.6 GPa, a tensile strength of 97 MPa, and a strain at failure of ca. 4%. Magnetic characterization was performed in a vibrating sample magnetometer, which showed that the coercivity was unaffected and that the saturation magnetization was in proportion with the ferrite content. The used ferrite, CoFe2O4, is a magnetically hard material, demonstrated by that the composite material behaved as a traditional permanent magnet. The presented processing route is easily adaptable to prepare millimeter-thick and moldable magnetic objects. This suggests that the processing method has the potential to be scaled-up for industrial use for the preparation of a new subcategory of magnetic, low-cost, and moldable objects based on cellulose nanofibers.

  16. The Gray Institute 'open' high-content, fluorescence lifetime microscopes.

    Science.gov (United States)

    Barber, P R; Tullis, I D C; Pierce, G P; Newman, R G; Prentice, J; Rowley, M I; Matthews, D R; Ameer-Beg, S M; Vojnovic, B

    2013-08-01

    We describe a microscopy design methodology and details of microscopes built to this 'open' design approach. These demonstrate the first implementation of time-domain fluorescence microscopy in a flexible automated platform with the ability to ease the transition of this and other advanced microscopy techniques from development to use in routine biology applications. This approach allows easy expansion and modification of the platform capabilities, as it moves away from the use of a commercial, monolithic, microscope body to small, commercial off-the-shelf and custom made modular components. Drawings and diagrams of our microscopes have been made available under an open license for noncommercial use at http://users.ox.ac.uk/~atdgroup. Several automated high-content fluorescence microscope implementations have been constructed with this design framework and optimized for specific applications with multiwell plates and tissue microarrays. In particular, three platforms incorporate time-domain FLIM via time-correlated single photon counting in an automated fashion. We also present data from experiments performed on these platforms highlighting their automated wide-field and laser scanning capabilities designed for high-content microscopy. Devices using these designs also form radiation-beam 'end-stations' at Oxford and Surrey Universities, showing the versatility and extendibility of this approach. © 2013 The Authors. Journal of Microscopy published by John Wiley & Sons Ltd on behalf of Royal Microscopical Society.

  17. Runaway electron dynamics in tokamak plasmas with high impurity content

    Science.gov (United States)

    Martín-Solís, J. R.; Loarte, A.; Lehnen, M.

    2015-09-01

    The dynamics of high energy runaway electrons is analyzed for plasmas with high impurity content. It is shown that modified collision terms are required in order to account for the collisions of the relativistic runaway electrons with partially stripped impurity ions, including the effect of the collisions with free and bound electrons, as well as the scattering by the full nuclear and the electron-shielded ion charge. The effect of the impurities on the avalanche runaway growth rate is discussed. The results are applied, for illustration, to the interpretation of the runaway electron behavior during disruptions, where large amounts of impurities are expected, particularly during disruption mitigation by massive gas injection. The consequences for the electron synchrotron radiation losses and the resulting runaway electron dynamics are also analyzed.

  18. High-content screening of functional genomic libraries.

    Science.gov (United States)

    Rines, Daniel R; Tu, Buu; Miraglia, Loren; Welch, Genevieve L; Zhang, Jia; Hull, Mitchell V; Orth, Anthony P; Chanda, Sumit K

    2006-01-01

    Recent advances in functional genomics have enabled genome-wide genetic studies in mammalian cells. These include the establishment of high-throughput transfection and viral propagation methodologies, the production of large-scale cDNA and siRNA libraries, and the development of sensitive assay detection processes and instrumentation. The latter has been significantly facilitated by the implementation of automated microscopy and quantitative image analysis, collectively referred to as high-content screening (HCS), toward cell-based functional genomics application. This technology can be applied to whole genome analysis of discrete molecular and phenotypic events at the level of individual cells and promises to significantly expand the scope of functional genomic analyses in mammalian cells. This chapter provides a comprehensive guide for curating and preparing function genomics libraries and performing HCS at the level of the genome.

  19. Barley starch bioengineering for high phosphate and amylose

    DEFF Research Database (Denmark)

    Blennow, Per Gunnar Andreas; Carciofi, Massimiliano; Shaik, Shahnoor Sultana

    2011-01-01

    of the three genes encoding the starch-branching enzymes SBEI, SBEIIa, and SBEIIb using a triple RNAi chimeric hairpin construct we generated a virtually amylopectin-free barley. The grains of the transgenic lines were shrunken and had a yield of around 80% of the control line. The starch granules were...

  20. Effect of drying conditions on crystallinity of amylose nanoparticles prepared by nanoprecipitation.

    Science.gov (United States)

    Yan, Xiaoxia; Chang, Yanjiao; Wang, Qian; Fu, Youjia; Zhou, Jiang

    2017-04-01

    In this study, amylose nanoparticles prepared by nanoprecipitation were dried at different conditions. The crystalline structure, crystallinity, re-dispersibility and morphological characteristic of the amylose nanoparticles after drying were investigated. X-ray diffraction analysis revealed that the V-type crystalline structure of the amylose nanoparticles formed in the drying process instead of the precipitation process, and drying condition significantly affects the crystallinity. The temperature cycles drying at 4°C and 40°C considerably increased crystallinity of the amylose nanoparticles, 24h (4/40°C, 12h/12h) drying under 11% relative humidity could give rise to a crystallinity up to 50.05%. The applied drying procedures had no obvious effect on the appearance of the amylose nanoparticles. The Z average-size (d. nm) and polydispersity index (PDI) obtained from dynamic light scattering analysis suggested that the drying processes caused some aggregates, but the dried amylose nanoparticles could be well dispersed in water. Copyright © 2017 Elsevier B.V. All rights reserved.

  1. Optimization of process parameters for extrusion cooking of low amylose rice flour blended with seeded banana and carambola pomace for development of minerals and fiber rich breakfast cereal.

    Science.gov (United States)

    Borah, Anjan; Lata Mahanta, Charu; Kalita, Dipankar

    2016-01-01

    The low-amylose rice flour, seeded banana (Musa balbisiana, ABB) and carambola (Averrhoa carambola L.) pomace blends were extruded to prepare ready to eat breakfast cereal in a single-screw extruder. Response surface methodology using a central composite design was used to evaluate effect of independent variables, namely blend ratio (80:10:10 - 60:30:10 of low-amylose rice flour, seeded banana and carambola pomace), screw speed (200 - 400 rpm), barrel temperature (90 - 130 (°)C) and feed moisture content (9 - 21 g/100 g, wet basis) on product responses. Quadratic polynomial equations were also obtained by multiple regression analysis. The predicted models were adequate based on lack-of-fit test and coefficient of determination obtained. The feed moisture content had critical effect on all response variables. The compromised optimal conditions obtained by numerical integration for development of extrudates were: screw speed of 350 rpm, barrel temperature of 120 (°)C, feed moisture content of 12 g/100 g and 65:25:10 of blend ratio of feed. In the optimized condition low-amylose rice blend is found to have better physicochemical properties (water absorption index of 481.79 g/100 g; water solubility index of 44.13 g/100 g) and dietary fiber content of 21.35 g/100 g respectively. The developed breakfast cereal showed considerable amount of minerals (Mg and K) and overall acceptability was found to be 7.8.

  2. The dust content of QSO hosts at high redshift

    CERN Document Server

    Calura, F; Vignali, C; Pozzi, F; Pipino, A; Matteucci, F

    2013-01-01

    Infrared observations of high-z quasar (QSO) hosts indicate the presence of large masses of dust in the early universe. When combined with other observables, such as neutral gas masses and star formation rates, the dust content of z~6 QSO hosts may help constraining their star formation history. We have collected a database of 58 sources from the literature discovered by various surveys and observed in the FIR. We have interpreted the available data by means of chemical evolution models for forming proto-spheroids, investigating the role of the major parameters regulating star formation and dust production. For a few systems, given the derived small dynamical masses, the observed dust content can be explained only assuming a top-heavy initial mass function, an enhanced star formation efficiency and an increased rate of dust accretion. However, the possibility that, for some systems, the dynamical mass has been underestimated cannot be excluded. If this were the case, the dust mass can be accounted for by stan...

  3. Superparamagnetic Iron Oxide Nanoparticles-Complexed Cationic Amylose for In Vivo Magnetic Resonance Imaging Tracking of Transplanted Stem Cells in Stroke.

    Science.gov (United States)

    Lin, Bing-Ling; Zhang, Jun-Zhao; Lu, Lie-Jing; Mao, Jia-Ji; Cao, Ming-Hui; Mao, Xu-Hong; Zhang, Fang; Duan, Xiao-Hui; Zheng, Chu-Shan; Zhang, Li-Ming; Shen, Jun

    2017-05-10

    Cell-based therapy with mesenchymal stem cells (MSCs) is a promising strategy for acute ischemic stroke. In vivo tracking of therapeutic stem cells with magnetic resonance imaging (MRI) is imperative for better understanding cellular survival and migrational dynamics over time. In this study, we develop a novel biocompatible nanocomplex (ASP-SPIONs) based on cationic amylose, by introducing spermine and the image label, ultrasmall superparamagnetic iron oxide nanoparticles (SPIONs), to label MSCs. The capacity, efficiency, and cytotoxicity of the nanocomplex in transferring SPIONs into green fluorescence protein-modified MSCs were tested; and the performance of in vivo MRI tracking of the transplanted cells in acute ischemic stroke was determined. The results demonstrated that the new class of SPIONs-complexed nanoparticles based on biodegradable amylose can serve as a highly effective and safe carrier to transfer magnetic label into stem cells. A reliable tracking of transplanted stem cells in stroke was achieved by MRI up to 6 weeks, with the desirable therapeutic benefit of stem cells on stroke retained. With the advantages of a relatively low SPIONs concentration and a short labeling period, the biocompatible complex of cationic amylose with SPIONs is highly translatable for clinical application. It holds great promise in efficient, rapid, and safe labeling of stem cells for subsequent cellular MRI tracking in regenerative medicine.

  4. Structural investigation of amylose complexes with small ligands: helical conformation, crystalline structure and thermostability.

    Science.gov (United States)

    Le Bail, P; Rondeau, C; Buléon, A

    2005-03-01

    Crystalline amylose complexes were prepared with decanal, 1-butanol, menthone and alpha-naphtol. Their crystalline structure and the related helical conformation, determined by wide angle X-ray diffraction (WAXD) and 13C CPMAS solid state NMR, were assigned to V6I, V6II, V6III and V8 types, respectively. It was possible to propose some hypotheses on the possible nature of interactions and especially intra-/inter-helical inclusion. Some shifts in the NMR C1 carbon signals were attributed to the presence of ligand in specific sites inside the structure for a same type of V6 helical conformation. Moreover, the crystallinity and polymorphic changes induced by desorption/rehydration were studied. A general increase of the carbon resonances sharpness upon rehydration has been observed, but also a V6II-V6I transition when decreasing the water content. Differential scanning calorimetry (DSC) experiments were also performed to approach the thermostability of the four types of complex and also the way they form again after melting/cooling sequences.

  5. Semisolid Slurry Preparation of Die Steel with High Chromium Content

    Institute of Scientific and Technical Information of China (English)

    MAO Wei-min; ZHAO Ai-min; ZHANG Li-juan; ZHONG Xue-you

    2004-01-01

    The semisolid slurry preparation of die steels Cr12 and Cr12MoV with high chromium content was studied. The results show that the semisolid slurry of both steels with solid of 40 %-60 % can be made by electromagnetic stirring method and is easy to be discharged from the bottom little hole of the stirring chamber. The sizes of the spherical primary austenite in the slurry of die steels Cr12 and Cr12MoV are 50-100 μm and 80-150 μm, respectively. The homogeneous temperature field and solute field for both steel melts are obtained. The strong temperature fluctuation in the melt with many fine primary austenite grains occurs and the remelting of the secondary arm roots at the same time is accelerated because of the electromagnetic stirring. These are the most important reasons for deposition of spherical primary austenite grains.

  6. High-Content Screening for Quantitative Cell Biology.

    Science.gov (United States)

    Mattiazzi Usaj, Mojca; Styles, Erin B; Verster, Adrian J; Friesen, Helena; Boone, Charles; Andrews, Brenda J

    2016-08-01

    High-content screening (HCS), which combines automated fluorescence microscopy with quantitative image analysis, allows the acquisition of unbiased multiparametric data at the single cell level. This approach has been used to address diverse biological questions and identify a plethora of quantitative phenotypes of varying complexity in numerous different model systems. Here, we describe some recent applications of HCS, ranging from the identification of genes required for specific biological processes to the characterization of genetic interactions. We review the steps involved in the design of useful biological assays and automated image analysis, and describe major challenges associated with each. Additionally, we highlight emerging technologies and future challenges, and discuss how the field of HCS might be enhanced in the future.

  7. Preparation of Garlic Powder with High Allicin Content

    Institute of Scientific and Technical Information of China (English)

    LI Yu; XU Shi-ying

    2007-01-01

    Garlic powder with high allicin content was prepared using microwave-vacuum and vacuum drying as well as microencapsulation to protect alliinase activity throughout the stomach and improve the ratio of alliin transforming into allicin. The results showed that the optimal drying condition was 376.1 W for 3 min, 282.1 W for 3 min, 188 W for 9 min, and 94 W for 3 min. The thiosulfinates retention after drying was 90.2%. Following drying, the garlic powder was microencapsulated by modified fluidized bed technique. Scanning electron microscope revealed good integrity and core materials that were embedded in the microcapsules. Studies on the release kinetics of microencapsulated garlic granulates in vitro using simulated intestinal fluid indicated that release of garlic powder could be controlled in the intestine by passing stomach conditions.

  8. Automation in high-content flow cytometry screening.

    Science.gov (United States)

    Naumann, U; Wand, M P

    2009-09-01

    High-content flow cytometric screening (FC-HCS) is a 21st Century technology that combines robotic fluid handling, flow cytometric instrumentation, and bioinformatics software, so that relatively large numbers of flow cytometric samples can be processed and analysed in a short period of time. We revisit a recent application of FC-HCS to the problem of cellular signature definition for acute graft-versus-host-disease. Our focus is on automation of the data processing steps using recent advances in statistical methodology. We demonstrate that effective results, on par with those obtained via manual processing, can be achieved using our automatic techniques. Such automation of FC-HCS has the potential to drastically improve diagnosis and biomarker identification.

  9. High-content analysis for drug delivery and nanoparticle applications.

    Science.gov (United States)

    Brayden, David J; Cryan, Sally-Ann; Dawson, Kenneth A; O'Brien, Peter J; Simpson, Jeremy C

    2015-08-01

    High-content analysis (HCA) provides quantitative multiparametric cellular fluorescence data. From its origins in discovery toxicology, it is now addressing fundamental questions in drug delivery. Nanoparticles (NPs), polymers, and intestinal permeation enhancers are being harnessed in drug delivery systems to modulate plasma membrane properties and the intracellular environment. Identifying comparative mechanistic cytotoxicity on sublethal events is crucial to expedite the development of such systems. NP uptake and intracellular routing pathways are also being dissected using chemical and genetic perturbations, with the potential to assess the intracellular fate of targeted and untargeted particles in vitro. As we discuss here, HCA is set to make a major impact in preclinical delivery research by elucidating the intracellular pathways of NPs and the in vitro mechanistic-based toxicology of formulation constituents.

  10. Oxy-combustion of high water content fuels

    Science.gov (United States)

    Yi, Fei

    As the issues of global warming and the energy crisis arouse extensive concern, more and more research is focused on maximizing energy efficiency and capturing CO2 in power generation. To achieve this, in this research, we propose an unconventional concept of combustion - direct combustion of high water content fuels. Due to the high water content in the fuels, they may not burn under air-fired conditions. Therefore, oxy-combustion is applied. Three applications of this concept in power generation are proposed - direct steam generation for the turbine cycle, staged oxy-combustion with zero flue gas recycle, and oxy-combustion in a low speed diesel-type engine. The proposed processes could provide alternative approaches to directly utilize fuels which intrinsically have high water content. A large amount of energy to remove the water, when the fuels are utilized in a conventional approach, is saved. The properties and difficulty in dewatering high water content fuels (e.g. bioethanol, microalgae and fine coal) are summarized. These fuels include both renewable and fossil fuels. In addition, the technique can also allow for low-cost carbon capture due to oxy-combustion. When renewable fuel is utilized, the whole process can be carbon negative. To validate and evaluate this concept, the research focused on the investigation of the flame stability and characteristics for high water content fuels. My study has demonstrated the feasibility of burning fuels that have been heavily diluted with water in a swirl-stabilized burner. Ethanol and 1-propanol were first tested as the fuels and the flame stability maps were obtained. Flame stability, as characterized by the blow-off limit -- the lowest O2 concentration when a flame could exist under a given oxidizer flow rate, was determined as a function of total oxidizer flow rate, fuel concentration and nozzle type. Furthermore, both the gas temperature contour and the overall ethanol concentration in the droplets along the

  11. CONTENTS

    Institute of Scientific and Technical Information of China (English)

    2012-01-01

    The Development and Evolution of the Idea of the Mandate of Heaven in the Zhou Dynasty The changes in the idea of Mandate of Heaven during the Shang and Zhou dynasties are of great significance in the course of the development of traditional Chinese culture. The quickening and awakening of the humanistic spirit was not the entire content of the Zhou idea of Mandate of Heaven. In the process of annihilating the Shang dynasty and setting up their state, the Zhou propagated the idea of the Mandate of Heaven out of practical needs. Their idea of the Mandate of Heaven was not very different from that of the Shang. From the Western Zhou on, the Zhou idea of Mandate of Heaven by no means developed in a linear way along a rational track. The intermingling of rationality and irrationality and of awakening and non-awakening remained the overall state of the Zhou intellectual superstructure after their "spiritual awakening".

  12. Isolation and characterization of potato-tomato somatic hybrids using an amylose-free potato mutant as parental genotype.

    Science.gov (United States)

    Jacobsen, E; Reinhout, P; Bergervoet, J E; de Looff, J; Abidin, P E; Huigen, D J; Ramanna, M S

    1992-11-01

    Using different genotypes of tomato and diploid potato, possessing alien selectable markers as well as endogenous markers, very high frequencies of protoplast fusion hybrids were obtained. One endogenous genetic marker, the amylose-free (amf) mutant of potato, was helpful not only for the confirmation of fusion products but also for the study of genetic complementation and the segregation of amylose-free starch in microspores. Cytological analysis of the fusion hybrids indicated that except for one which was hexaploid, all of them had a perfectly balanced chromosome number of allotetraploid constitution (2n = 4x = 48). Despite normal chromosome pairing and a diploid behaviour, the microspores in some of the fusion hybrids segregated for the recessive amf-locus. This anomalous segregation of a recessive character in these hybrids was shown not to be due to chromosome elimination or to the absence of the wild-type tomato Amf gene. Although all fusion hybrids were totally sterile, the hexaploid produced stainable pollen and berries with badly developed seeds. Embryo rescue has so far failed to produce backcross progeny.

  13. Diversity in the Content of Some Nutritional Components in Husked Seeds of Three Wild Rice Species and Rice Varieties in Yunnan Province of China

    Institute of Scientific and Technical Information of China (English)

    Zai-Quan CHENG; Xing-Qi HUANG; Yi-Zheng ZHANG; Jun QIAN; Ming-Zhi YANG; Cheng-Jun WU; Jia-Fu LIU

    2005-01-01

    , especially high protein and ideal amylose content, of Yunnan wild rice species may be useful in improving the nutritional value of rice. This is the first report regarding the amino acid, mineral element, protein and amylose content of husked seeds of some Yunnan wild rice species that have important genetic characteristics for rice quality and nutritional value.

  14. An oral multispecies biofilm model for high content screening applications

    Science.gov (United States)

    Kommerein, Nadine; Stumpp, Sascha N.; Müsken, Mathias; Ehlert, Nina; Winkel, Andreas; Häussler, Susanne; Behrens, Peter; Buettner, Falk F. R.; Stiesch, Meike

    2017-01-01

    Peri-implantitis caused by multispecies biofilms is a major complication in dental implant treatment. The bacterial infection surrounding dental implants can lead to bone loss and, in turn, to implant failure. A promising strategy to prevent these common complications is the development of implant surfaces that inhibit biofilm development. A reproducible and easy-to-use biofilm model as a test system for large scale screening of new implant surfaces with putative antibacterial potency is therefore of major importance. In the present study, we developed a highly reproducible in vitro four-species biofilm model consisting of the highly relevant oral bacterial species Streptococcus oralis, Actinomyces naeslundii, Veillonella dispar and Porphyromonas gingivalis. The application of live/dead staining, quantitative real time PCR (qRT-PCR), scanning electron microscopy (SEM) and urea-NaCl fluorescence in situ hybridization (urea-NaCl-FISH) revealed that the four-species biofilm community is robust in terms of biovolume, live/dead distribution and individual species distribution over time. The biofilm community is dominated by S. oralis, followed by V. dispar, A. naeslundii and P. gingivalis. The percentage distribution in this model closely reflects the situation in early native plaques and is therefore well suited as an in vitro model test system. Furthermore, despite its nearly native composition, the multispecies model does not depend on nutrient additives, such as native human saliva or serum, and is an inexpensive, easy to handle and highly reproducible alternative to the available model systems. The 96-well plate format enables high content screening for optimized implant surfaces impeding biofilm formation or the testing of multiple antimicrobial treatment strategies to fight multispecies biofilm infections, both exemplary proven in the manuscript. PMID:28296966

  15. Development of automatic image analysis methods for high-throughput and high-content screening

    NARCIS (Netherlands)

    Di, Zi

    2013-01-01

    This thesis focuses on the development of image analysis methods for ultra-high content analysis of high-throughput screens where cellular phenotype responses to various genetic or chemical perturbations that are under investigation. Our primary goal is to deliver efficient and robust image analysis

  16. Development of automatic image analysis methods for high-throughput and high-content screening

    NARCIS (Netherlands)

    Di, Zi

    2013-01-01

    This thesis focuses on the development of image analysis methods for ultra-high content analysis of high-throughput screens where cellular phenotype responses to various genetic or chemical perturbations that are under investigation. Our primary goal is to deliver efficient and robust image analysis

  17. High-resolution time-of-flight mass spectrometry fingerprinting of metabolites from cecum and distal colon contents of rats fed resistant starch

    Energy Technology Data Exchange (ETDEWEB)

    Anderson, Timothy J. [Ames Laboratory; Jones, Roger W. [Ames Laboratory; Ai, Yongfeng [Iowa State University; Houk, Robert S. [Ames Laboratory; Jane, Jay-lin [Iowa State University; Zhao, Yinsheng [Iowa State University; Birt, Diane F. [Iowa State University; McClelland, John F. [Ames Laboratory

    2013-12-04

    Time-of-flight mass spectrometry along with statistical analysis was utilized to study metabolic profiles among rats fed resistant starch (RS) diets. Fischer 344 rats were fed four starch diets consisting of 55 % (w/w, dbs) starch. A control starch diet consisting of corn starch was compared against three RS diets. The RS diets were high-amylose corn starch (HA7), HA7 chemically modified with octenyl succinic anhydride, and stearic-acid-complexed HA7 starch. A subgroup received antibiotic treatment to determine if perturbations in the gut microbiome were long lasting. A second subgroup was treated with azoxymethane (AOM), a carcinogen. At the end of the 8-week study, cecal and distal colon content samples were collected from the sacrificed rats. Metabolites were extracted from cecal and distal colon samples into acetonitrile. The extracts were then analyzed on an accurate-mass time-of-flight mass spectrometer to obtain their metabolic profile. The data were analyzed using partial least-squares discriminant analysis (PLS-DA). The PLS-DA analysis utilized a training set and verification set to classify samples within diet and treatment groups. PLS-DA could reliably differentiate the diet treatments for both cecal and distal colon samples. The PLS-DA analyses of the antibiotic and no antibiotic-treated subgroups were well classified for cecal samples and modestly separated for distal colon samples. PLS-DA analysis had limited success separating distal colon samples for rats given AOM from those not treated; the cecal samples from AOM had very poor classification. Mass spectrometry profiling coupled with PLS-DA can readily classify metabolite differences among rats given RS diets.

  18. Trapping by amylose of the aliphatic chain grafted onto chlorogenic acid: importance of the graft position.

    Science.gov (United States)

    Le-Bail, P; Lorentz, C; Pencreac'h, G; Soultani-Vigneron, S; Pontoire, B; López Giraldo, L J; Villeneuve, P; Hendrickx, J; Tran, V

    2015-03-06

    5-Caffeoylquinic acid (chlorogenic acid), is classified in acid-phenols family and as polyphenolic compounds it possesses antioxidant activity. The oxydative modification of chlorogenic acid in foods may lead to alteration of their qualities; to counteract these degradation effects, molecular encapsulation was used to protect chlorogenic acid. Amylose can interact strongly with a number of small molecules, including lipids. In order to enable chlorogenic acid complexation by amylose, a C16 aliphatic chain was previously grafted onto the cycle of quinic acid. This work showed that for the two lipophilic derivatives of chlorogenic acid: hexadecyl chlorogenate obtained by alkylation and 3-O-palmitoyl chlorogenic acid obtained by acylation; only the 3-O-palmitoyl chlorogenic acid complexed amylose. The chlorogenic acid derivatives were studied by X-ray diffraction, differential scanning calorimetry and NMR to elucidate the interaction. By comparing the results with previous work on the complexation of amylose by 4-O-palmitoyl chlorogenic acid, the importance of the aliphatic chain position on the cycle of the quinic acid is clearly highlighted. A study in molecular modeling helped to understand the difference in behavior relative to amylose of these three derivatives of chlorogenic acid.

  19. Architecture of Amylose Supramolecules in Form of Inclusion Complexes by Phosphorylase-Catalyzed Enzymatic Polymerization

    Science.gov (United States)

    Kadokawa, Jun-ichi

    2013-01-01

    This paper reviews the architecture of amylose supramolecules in form of inclusion complexes with synthetic polymers by phosphorylase-catalyzed enzymatic polymerization. Amylose is known to be synthesized by enzymatic polymerization using α-d-glucose 1-phosphate as a monomer, by phosphorylase catalysis. When the phosphorylase-catalyzed enzymatic polymerization was conducted in the presence of various hydrophobic polymers, such as polyethers, polyesters, poly(ester-ether), and polycarbonates as a guest polymer, such inclusion supramolecules were formed by the hydrophobic interaction in the progress of polymerization. Because the representation of propagation in the polymerization is similar to the way that a vine of a plant grows, twining around a rod, this polymerization method for the formation of amylose-polymer inclusion complexes was proposed to be named “vine-twining polymerization”. To yield an inclusion complex from a strongly hydrophobic polyester, the parallel enzymatic polymerization system was extensively developed. The author found that amylose selectively included one side of the guest polymer from a mixture of two resemblant guest polymers, as well as a specific range in molecular weights of the guest polymers poly(tetrahydrofuran) (PTHF) in the vine-twining polymerization. Selective inclusion behavior of amylose toward stereoisomers of chiral polyesters, poly(lactide)s, also appeared in the vine-twining polymerization. PMID:24970172

  20. Molecular Dynamics Simulations of a Cyclic DP-240 Amylose Fragment in a Periodic Cell: Glass Transition Temperature and Water Diffusion

    Science.gov (United States)

    Molecular dynamics simulations using AMB06C, an in-house carbohydrate force field, (NPT ensembles, 1atm) were carried out on a periodic cell that contained a cyclic-DP-240 amylose fragment and TIP3P water molecules. Molecular conformation and movement of the amylose fragment and water molecules at ...

  1. The amylose-free potato mutant as a model plant to study gene expression and gene silencing.

    NARCIS (Netherlands)

    Flipse, E.

    1995-01-01

    In this thesis, gene-expression and gene silencing were examined for Granule Bound Starch Synthase (GBSS) which catalyses the formation of amylose and Branching Enzyme (BE) which catalyses the formation of amylopectin. The (GBSS) deficient, with iodine, red staining amylose-free (amf) potato mutant

  2. Physical stability and moisture sorption of aqueous chitosan-amylose starch films plasticized with polyols

    DEFF Research Database (Denmark)

    Cervera, Mirna Fernández; Karjalainen, Milja; Airaksinen, Sari

    2004-01-01

    The short-term stability and the water sorption of films prepared from binary mixtures of chitosan and native amylose maize starch (Hylon VII) were evaluated using free films. The aqueous polymer solutions of the free films contained 2% (w/w) film formers, glycerol, or erythritol as a plasticizer...... in the crystallinity of the films are evident within a 3-month period of storage, and the changes in the solid state are dependent on the plasticizer and storage conditions. When stored at ambient conditions for 3 months, the aqueous chitosan-amylose starch films plasticized with erythritol exhibited a partly...

  3. An objective method for High Dynamic Range source content selection

    DEFF Research Database (Denmark)

    Narwaria, Manish; Mantel, Claire; Da Silva, Matthieu Perreira

    2014-01-01

    component of such validation studies is the selection of a challenging and balanced set of source (reference) HDR content. In order to facilitate this, we present an objective method based on the premise that a more challenging HDR scene encapsulates higher contrast, and as a result will show up more...

  4. Preparation of starch-stabilized silver nanoparticles from amylose-sodium palmitate inclusion complexes

    Science.gov (United States)

    Starch-stabilized silver nanoparticles were prepared from amylose-sodium palmitate complexes by first converting sodium palmitate to silver palmitate by reaction with silver nitrate and then reducing the silver ion to metallic silver. This process produced water solutions that could be dried and the...

  5. Rheological properties of wheat starch influenced by amylose-lysophosphatidylcholine complexation at different gelation phases

    NARCIS (Netherlands)

    Ahmadiabhari, Salomeh; Woortman, Albert; Hamer, Rob; Loos, Katja

    2015-01-01

    Amylose is able to form helical inclusion complexes with lysophosphatidylcholine (LPC). This complexation influences the functional and rheological properties of wheat starch; however it is well known that the formation of these complexes lead the starchy systems to a slower enzymatic hydrolysis. Ba

  6. Phenotypic and genotypic characterization of an amylose-free starch mutant of the potato

    NARCIS (Netherlands)

    Jacobsen, E.; Hovenkamp-Hermelink, J.H.M; KRIJGSHELD, HT; NIJDAM, H; Pijnacker, L.P.; Witholt, B.; Feenstra, W.J.

    1989-01-01

    The amylose-free (amf) potato mutant 86.040 has been characterized phenotypically and genotypically . Not only storage starch in tubers and metabolic starch in leaves but also starch in cells with specific functions, such as columella cells in the root cap and guard cells of stomata, was

  7. Rheological properties of wheat starch influenced by amylose-lysophosphatidylcholine complexation at different gelation phases.

    Science.gov (United States)

    Ahmadi-Abhari, S; Woortman, A J J; Hamer, R J; Loos, K

    2015-05-20

    Amylose is able to form helical inclusion complexes with lysophosphatidylcholine (LPC). This complexation influences the functional and rheological properties of wheat starch; however it is well known that the formation of these complexes lead the starchy systems to a slower enzymatic hydrolysis. Based on this, to benefit from both the structuring properties of starch and also lower digestibility of the inclusion complexes, the objective of this study is the formation of amylose-LPC inclusion complexes while developing a firm network providing the desired functional properties in a starchy system. To investigate the influence of amylose-LPC complex formation at different stages of starch gelation on the viscosity behavior of wheat starch, 3% (w/w) LPC was added at three different points of the viscosity profile, obtained by rapid visco analyzer (RVA). LPC addition at all points affected the gelation behavior of wheat starch as compared with the reference. LPC addition at half-peak and peak of the viscosity profile resulted in a viscosity increase during cooling. Measuring the dynamic rheological properties of the freshly prepared gelatinized samples showed a decrease of storage modulus (G') and loss modulus (G") in the presence of LPC. During storage, in the presence of LPC, a lower elasticity was observed which indicates a lower rate of amylose retrogradation due to complexation with LPC.

  8. Molecular basis of the amylose-like polymer formation catalyzed by Neisseria polysaccharea amylosucrase

    DEFF Research Database (Denmark)

    Albenne, Cécile; Skov, Lars; Mirza, Osman Asghar;

    2004-01-01

    Amylosucrase from Neisseria polysaccharea is a remarkable transglucosidase from family 13 of the glycoside-hydrolases that synthesizes an insoluble amylose-like polymer from sucrose in the absence of any primer. Amylosucrase shares strong structural similarities with alpha-amylases. Exactly how t...

  9. Occurrence of amylose-lipid complexes in teff and maize starch biphasic pastes

    CSIR Research Space (South Africa)

    Wokadala, OC

    2012-09-01

    Full Text Available acid followed by thermo-stable alpha-amylase hydrolysis in a rapid visco-analyzer. X-ray diffraction analysis of pastes before and residues after hydrolysis showed crystalline V-amylose diffraction patterns for the starches pasted for a prolonged time...

  10. Behaviour of genetically modified amylose free potato clones as progenitors in a breeding program.

    NARCIS (Netherlands)

    Heeres, P.; Jacobsen, E.; Visser, R.G.F.

    1997-01-01

    Three amylose-free genetically modified potato clones were used both as male and female parents in a breeding program with non-GMO potato clones. Segregation data on the expression of the inserted antisense gene construct in tubers of progeny plants were in agreement with previous molecular analysis

  11. Not any type of rice performs equally to improve lactose-induced diarrhea characteristics in rats: is amylose an antidiarrheal factor? No tratamento das diarréias induzidas por lactose em ratos, nem todas as variedades de arroz agem da mesma forma: poderia ser a amilose um fator antidiarreico?

    Directory of Open Access Journals (Sweden)

    Ana Lia Felipoff

    2012-06-01

    Full Text Available The effectiveness of different types of rice in relation to their ability to accelerate diarrhea recovering was evaluated in a rat model of osmotic diarrhea (OD. Animals (90-100 g received protein free diet until reaching up to 20% weight loss, followed by lactose rich diet (LRD to induce osmotic diarrhea. Rats presenting osmotic diarrhea were divided into 4 groups, which received lactose rich diet for 4 days from 8 am to 8 pm, and one of three experimental products containing 6% rice flour differing in amylose content during the night: high (HA, intermediate (IA, and low (LA. A group fed stock diet containing equivalent amount of lactose was taken as control and allowed to recover spontaneously. Amylose and viscosity (cp at 25 °C, 10 rpm of final products were determined. Effectiveness was expressed as the ratio between percentages of normal vs. diarrheic stools during the treatment. Fecal characteristics in this rat model improved only as result of feeding high amylose content (HA type of rice. In this experimental model of osmotic diarrhea in young rats, the antidiarrheal effects of rice were strongly dependent on the type of diet used and appear to be related to its amylose content.Avaliou-se a eficiência de diferentes tipos de arroz quanto a sua habilidade de acelerar a recuperação de um episódio de diarreia em um modelo de indução de diarreia osmótica (DO em ratos. Animais (90-100 g receberam dieta isenta de proteína até perderem 20% do seu peso, seguida de uma dieta rica em lactose para indução de diarreia. Os ratos que apresentaram diarreia osmótica foram divididos em quatro grupos, os quais receberam uma dieta rica em lactose durante quatro dias das 8 às 20 hours e, durante a noite, receberam um dos produtos experimentais, com 6% de farinha de arroz e diferentes quantidades de amilose: alto (AA, intermediário (IA e baixo (BA teor de amilose. Um grupo alimentado com ração comercial foi escolhido como controle e para

  12. High water content in primitive continental flood basalts

    Science.gov (United States)

    Xia, Qun-Ke; Bi, Yao; Li, Pei; Tian, Wei; Wei, Xun; Chen, Han-Lin

    2016-01-01

    As the main constituent of large igneous provinces, the generation of continental flood basalts (CFB) that are characterized by huge eruption volume (>105 km3) within short time span (basaltic melts and the partition coefficient of H2O between cpx and basaltic melt. The arc-like H2O content (4.82 ± 1.00 wt.%) provides the first clear evidence that H2O plays an important role in the generation of CFB. PMID:27143196

  13. Decomposition kinetics of expanded austenite with high nitrogen contents

    DEFF Research Database (Denmark)

    Christiansen, Thomas; Somers, Marcel A. J.

    2006-01-01

    This paper addresses the decomposition kinetics of synthesized homogeneous expanded austenite formed by gaseous nitriding of stainless steel AISI 304L and AISI 316L with nitrogen contents up to 38 at.% nitrogen. Isochronal annealing experiments were carried out in both inert (N2) and reducing (H2......) atmospheres. Differential thermal analysis (DTA) and thermogravimetry were applied for identification of the decomposition reactions and X-ray diffraction analysis was applied for phase analysis. CrN precipitated upon annealing; the activation energies are 187 kJ/mol and 128 kJ/mol for AISI 316L and AISI 304L...

  14. Determination of Stabiliser Contents in Advanced Gun Propellants by Reverse Phase High Performance Liquid Chromatography

    Science.gov (United States)

    1994-03-01

    HIGH PERFORMANCE LIQUID CHROMATOGRAPHY N"m A.R. TURNER AND A. WHITE...TO biEPROOU.; AND SELL THIS REPORT Determination of Stabiliser Contents in Advanced Gun Propellants by Reverse Phase High Performance Liquid Chromatography A.R...8217/......... .. Availability Cooes Dist Avaiardlo A-i Determination of Stabiliser Contents in Advanced Gun Propellants by Reverse Phase High Performance Liquid Chromatography

  15. Electric-arc synthesis of soot with high content of higher fullerenes in parallel arc

    Science.gov (United States)

    Dutlov, A. E.; Nekrasov, V. M.; Sergeev, A. G.; Bubnov, V. P.; Kareev, I. E.

    2016-12-01

    Soot with a relatively high content of higher fullerenes (C76, C78, C80, C82, C84, C86, etc.) is synthesized in a parallel arc upon evaporation of pure carbon electrodes. The content of higher fullerenes in soot extract amounts to 13.8 wt % when two electrodes are simultaneously burnt in electric-arc reactor. Such a content is comparable with the content obtained upon evaporation of composite graphite electrodes with potassium carbonate impurity.

  16. High content screening as high quality assay for biological evaluation of photosensitizers in vitro.

    Directory of Open Access Journals (Sweden)

    Gisela M F Vaz

    Full Text Available A novel single step assay approach to screen a library of photdynamic therapy (PDT compounds was developed. Utilizing high content analysis (HCA technologies several robust cellular parameters were identified, which can be used to determine the phototoxic effects of porphyrin compounds which have been developed as potential anticancer agents directed against esophageal carcinoma. To demonstrate the proof of principle of this approach a small detailed study on five porphyrin based compounds was performed utilizing two relevant esophageal cancer cell lines (OE21 and SKGT-4. The measurable outputs from these early studies were then evaluated by performing a pilot screen using a set of 22 compounds. These data were evaluated and validated by performing comparative studies using a traditional colorimetric assay (MTT. The studies demonstrated that the HCS assay offers significant advantages over and above the currently used methods (directly related to the intracellular presence of the compounds by analysis of their integrated intensity and area within the cells. A high correlation was found between the high content screening (HCS and MTT data. However, the HCS approach provides additional information that allows a better understanding of the behavior of these compounds when interacting at the cellular level. This is the first step towards an automated high-throughput screening of photosensitizer drug candidates and the beginnings of an integrated and comprehensive quantitative structure action relationship (QSAR study for photosensitizer libraries.

  17. Pedagogical content knowledge and preparation of high school physics teachers

    Directory of Open Access Journals (Sweden)

    Eugenia Etkina

    2010-08-01

    Full Text Available This paper contains a scholarly description of pedagogical practices of the Rutgers Physics/Physical Science Teacher Preparation program. The program focuses on three aspects of teacher preparation: knowledge of physics, knowledge of pedagogy, and knowledge of how to teach physics (pedagogical content knowledge—PCK. The program has been in place for 7 years and has a steady production rate of an average of six teachers per year who remain in the profession. The main purpose of the paper is to provide information about a possible structure, organization, and individual elements of a program that prepares physics teachers. The philosophy of the program and the coursework can be implemented either in a physics department or in a school of education. The paper provides details about the program course work and teaching experiences and suggests ways to adapt it to other local conditions.

  18. A multi-channel high time resolution detector for high content imaging

    CERN Document Server

    Lapington, J S; Miller, G M; Ashton, T J R; Jarron, P; Despeisse, M; Powolny, F; Howorth, J; Milnes, J

    2009-01-01

    Medical imaging has long benefited from advances in photon counting detectors arising from space and particle physics. We describe a microchannel plate-based detector system for high content (multi-parametric) analysis, specifically designed to provide a step change in performance and throughput for measurements in imaged live cells and tissue for the ‘omics’. The detector system integrates multi-channel, high time resolution, photon counting capability into a single miniaturized detector with integrated ASIC electronics, comprising a fast, low power amplifier discriminator and TDC for every channel of the discrete pixel electronic readout, and achieving a pixel density improvement of order two magnitudes compared with current comparable devices. The device combines high performance, easy reconfigurability, and economy within a compact footprint. We present simulations and preliminary measurements in the context of our ultimate goals of 20 ps time resolution with multi-channel parallel analysis (1024 chan...

  19. Effect of dietary amylose/amylopectin ratio on growth performance, carcass traits, and meat quality in finishing pigs.

    Science.gov (United States)

    Yang, Can; Chen, Daiwen; Yu, Bing; Huang, Zhiqing; Mao, Xiangbing; Yu, Jie; Zheng, Ping; He, Jun

    2015-10-01

    The present study was conducted to evaluate the effect of dietary amylose/amylopectin ratio (DAR) on body health and meat quality in finishing pigs. A total of forty-eight DLY pigs (initial body weight of 74.9±5.0kg) were randomly allotted to two treatments, and fed either with LR (DAR: 12/88) or HR (DAR: 30/70) diet. Results showed that ingestion of a HR diet not only decreased the triacylglycerol and cholesterol concentrations in plasma (P<0.05), but also reduced the lipid contents in liver (P<0.05). Interestingly, ingestion of a HR diet tended to reduce the intramuscular fat content (P=0.06), and significantly increased the firmness (P<0.05) and loin-eye area (P<0.01). Moreover, ingestion of a HR diet significantly decreased the levels of MyHC I (P<0.05), and elevated the levels of MyHCIIb (P<0.05) gene expression in longissimus dorsi. Ingestion of a HR diet has resulted in down-regulation of the FAS3 gene in liver and longissimus dorsi (P<0.05). These findings suggested that a HR diet is helpful to reduce the lipogenesis both in liver and muscle.

  20. Thermal Analysis of ZPPR High Pu Content Stored Fuel

    Directory of Open Access Journals (Sweden)

    Charles W. Solbrig

    2014-01-01

    Full Text Available The Zero Power Physics Reactor (ZPPR operated from April 18, 1969, until 1990. ZPPR operated at low power for testing nuclear reactor designs. This paper examines the temperature of Pu content ZPPR fuel while it is in storage. Heat is generated in the fuel due to Pu and Am decay and is a concern for possible cladding damage. Damage to the cladding could lead to fuel hydriding and oxidizing. A series of computer simulations were made to determine the range of temperatures potentially occuring in the ZPPR fuel. The maximum calculated fuel temperature is 292°C (558°F. Conservative assumptions in the model intentionally overestimate temperatures. The stored fuel temperatures are dependent on the distribution of fuel in the surrounding storage compartments, the heat generation rate of the fuel, and the orientation of fuel. Direct fuel temperatures could not be measured but storage bin doors, storage sleeve doors, and storage canister temperatures were measured. Comparison of these three temperatures to the calculations indicates that the temperatures calculated with conservative assumptions are, as expected, higher than the actual temperatures. The maximum calculated fuel temperature with the most conservative assumptions is significantly below the fuel failure criterion of 600°C (1,112°F.

  1. High dynamic range images for enhancing low dynamic range content

    OpenAIRE

    Banterle, Francesco; Dellepiane, Matteo; Scopigno, Roberto

    2011-01-01

    This poster presents a practical system for enhancing the quality of Low Dynamic Range (LDR) videos using High Dynamic Range (HDR) background images. Our technique relies on the assumption that the HDR information is static in the video footage. This assumption can be valid in many scenarios where moving subjects are the main focus of the footage and do not have to interact with moving light sources or highly reflective objects. Another valid scenario is teleconferencing via webcams, where th...

  2. Degradation of the starch components amylopectin and amylose by barley α-amylase 1: Role of surface binding site 2

    DEFF Research Database (Denmark)

    Nielsen, Jonas Willum; Kramhøft, Birte; Bozonnet, Sophie

    2012-01-01

    of amylose progressed mono-exponentially. β-Cyclodextrin, however, inhibited only one of the two reaction rates of amylopectin and β-limit dextrin hydrolysis, whereas hydrolysis of amylose was unaffected. The Y380A enzyme showed no detectable inhibition by β-cyclodextrin but displayed similar kinetics...... is required for binding of the amylose helix mimic, β-cyclodextrin. Also, mutant enzymes altered at position 380 displayed reduced binding to starch granules. Similarly, binding of wild type AMY1 to starch granules was suppressed in the presence of β-cyclodextrin. We investigated the role of SBS2 by comparing...... kinetic properties of the wild type AMY1 and the Y380A mutant enzyme in hydrolysis of amylopectin, amylose and β-limit dextrin, and the inhibition by β-cyclodextrin. Progress curves of the release of reducing ends revealed a bi-exponential hydrolysis of amylopectin and β-limit dextrin, whereas hydrolysis...

  3. Increasing the amylose content of maize through silencing of sbe2a ...

    African Journals Online (AJOL)

    Yomi

    2012-04-12

    Apr 12, 2012 ... African Journal of Biotechnology Vol. 11(30), pp. 7628-7637, 12 ... vector was constructed based on plant expression plasmid pCAMBIA1301. Then the ... SBEIIb, indicating that the functions of SBEIIa and. SBEIIb cannot be ...

  4. A parallel microfluidic flow cytometer for high-content screening.

    Science.gov (United States)

    McKenna, Brian K; Evans, James G; Cheung, Man Ching; Ehrlich, Daniel J

    2011-05-01

    A parallel microfluidic cytometer (PMC) uses a high-speed scanning photomultiplier-based detector to combine low-pixel-count, one-dimensional imaging with flow cytometry. The 384 parallel flow channels of the PMC decouple count rate from signal-to-noise ratio. Using six-pixel one-dimensional images, we investigated protein localization in a yeast model for human protein misfolding diseases and demonstrated the feasibility of a nuclear-translocation assay in Chinese hamster ovary (CHO) cells expressing an NFκB-EGFP reporter.

  5. Click modification of helical amylose by poly(L-lysine) dendrons for non-viral gene delivery

    Energy Technology Data Exchange (ETDEWEB)

    Pang, Jia-Dong [PCFM Lab and GDHPPC Lab, Institute of Polymer Science, Department of Polymer and Materials Science, School of Chemistry and Chemical Engineering, Sun Yat-sen (Zhongshan) University, Guangzhou 510275 (China); Zhuang, Bao-Xiong [Second Affiliated Hospital, Sun Yat-sen (Zhongshan) University, Guangzhou 510102 (China); Mai, Kaijin [PCFM Lab and GDHPPC Lab, Institute of Polymer Science, Department of Polymer and Materials Science, School of Chemistry and Chemical Engineering, Sun Yat-sen (Zhongshan) University, Guangzhou 510275 (China); Chen, Ru-Fu [Second Affiliated Hospital, Sun Yat-sen (Zhongshan) University, Guangzhou 510102 (China); Wang, Jie, E-mail: sumsjw@163.com [Second Affiliated Hospital, Sun Yat-sen (Zhongshan) University, Guangzhou 510102 (China); Zhang, Li-Ming, E-mail: ceszhlm@mail.sysu.edu.cn [PCFM Lab and GDHPPC Lab, Institute of Polymer Science, Department of Polymer and Materials Science, School of Chemistry and Chemical Engineering, Sun Yat-sen (Zhongshan) University, Guangzhou 510275 (China)

    2015-04-01

    Although amylose as a naturally-occurring helical polysaccharide has been widely used for biomedical applications, few studies have dealt with its chemical modification for non-viral gene delivery. In this work, the click modification of amylose by poly(L-lysine) dendrons was carried out and then characterized by Fourier transform infrared spectroscopy, wide-angle X-ray diffraction and elemental analyses. Such a modified polysaccharide exhibited excellent ability to condense plasmid pMSCV-GFP-PARK2 into compact and spherical nanoparticles. Moreover, it displayed much lower cytotoxicity when compared to branched polyethylenimine (bPEI, 25 kDa), a commercially available gene vector. Similar to bPEI, it had a dose-dependent gene transfection activity in human embryonic kidney 293T cells, as observed by confocal laser scanning microscopy and flow cytometry. At each optimized N/P ratio, the percentage of transfected cells by this modified polysaccharide was found to be comparable to that by bPEI. Western blot and cell apoptosis analyses confirmed its effectiveness for the delivery of plasmid pMSCV-GFP-PARK2 to 293T cells. - Highlights: • The click modification of amylose by poly(L-lysine) dendrons was carried out. • This modified amylose could condense plasmid pMSCV-GFP-PARK2 into nanocomplexes. • This modified amylose exhibited much lower cytotoxicity than commercial polyethylenimine. • This modified amylose could delivery efficiently plasmid pMSCV-GFP-PARK2 to 293T cells.

  6. High content image cytometry in the context of subnuclear organization.

    Science.gov (United States)

    De Vos, W H; Van Neste, L; Dieriks, B; Joss, G H; Van Oostveldt, P

    2010-01-01

    The organization of proteins in space and time is essential to their function. To accurately quantify subcellular protein characteristics in a population of cells with regard for the stochasticity of events in a natural context, there is a fast-growing need for image-based cytometry. Simultaneously, the massive amount of data that is generated by image-cytometric analyses, calls for tools that enable pattern recognition and automated classification. In this article, we present a general approach for multivariate phenotypic profiling of individual cell nuclei and quantification of subnuclear spots using automated fluorescence mosaic microscopy, optimized image processing tools, and supervised classification. We demonstrate the efficiency of our analysis by determination of differential DNA damage repair patterns in response to genotoxic stress and radiation, and we show the potential of data mining in pinpointing specific phenotypes after transient transfection. The presented approach allowed for systematic analysis of subnuclear features in large image data sets and accurate classification of phenotypes at the level of the single cell. Consequently, this type of nuclear fingerprinting shows potential for high-throughput applications, such as functional protein assays or drug compound screening.

  7. Decreased adipose tissue zinc content is associated with metabolic parameters in high fat fed Wistar rats

    OpenAIRE

    Alexey A. Tinkov; Elizaveta V. Popova; Evgenia R. Gatiatulina; Anastasia A. Skalnaya; Elena N. Yakovenko; Irina B. Alchinova; Mikhail Y. Karganov; Anatoly V. Skalny; Nikonorov, Alexandr A.

    2016-01-01

    Background. Limited data on adipose tissue zinc content in obesity exist. At the same time, the association between adipose tissue zinc content and metabolic parameters in dietary-induced obesity is poorly studied. Therefore, the primary objective of this study is to assess adipose tissue zinc content and its association  with morphometric parameters, adipokine spectrum, proinflammatory cytokines, and apolipoprotein profile in high fat fed Wistar rats. Material and method...

  8. Effects of surfactants on size and structure of amylose nanoparticles prepared by precipitation

    Indian Academy of Sciences (India)

    Yan Dong; Yanjiao Chang; Qian Wang; Jin Tong; Jiang Zhou

    2016-02-01

    The present work investigated the influence of surfactants on size and structure of amylose nanoparticles (ANPs) prepared through precipitation. ANPs were fabricated using absolute ethanol containing surfactants (Tween80, Span80 and mixtures of Tween80 and Span80 with ratios of 25/75, 50/50 and 75/25, respectively) as non-solvents. The obtained ANPs were characterized using dynamic light scattering (DLS), scanning electron microscopy and X-ray diffraction. The results showed that surfactant type, concentration and hydrophilic–lipophilic balance (HLB) value had great impact on size of precipitated ANPs. The smallest ANPs with mean size of 155 nm determined by DLS were obtained by using 0.5% (in proportion of the amylose solution volume) of Tween80/Span80 mixture (HLB = 12.33). The precipitated ANPs possessed the V-type crystalline structure no matter whether using the surfactants or not.

  9. Trend in Plutonium Content of MOX in Thermal Reactor Use and Irradiation Behavior of MOX with High Plutonium Content

    Energy Technology Data Exchange (ETDEWEB)

    Nakae, N.; Baba, T.; Kamimura, K. [Japan Nuclear Energy Safety Organization - JNES, TOKYU REIT Toranomon Bldg., 3-17-1, Toranomon, Minato-ku, Tokyo, 105-0001 (Japan); Verwerft, M.; Jutier, F. [SCK-CEN (Belgium)

    2009-06-15

    The uranium enrichment of UO{sub 2} fuel for the current power reactors, both PWR and BWR, tends to increase because of increasing burn-up target. The plutonium content of MOX fuel used in thermal reactors shall be determined in order to have reactivity worth equivalent to enriched UO{sub 2} fuel based on physical accounting method for adjusting fissile enrichment, thus the plutonium content tends to increase according to the increment of the uranium enrichment of UO{sub 2} fuel and this trend shall further be accentuated due to the fact that Pu recovered from reprocessing of the spent high burnup UO{sub 2} fuel contains less fissile isotopes. The plutonium content is calculated by use of the physical accounting method with the plutonium having several kinds of isotope ratios and the calculation results indicate that the plutonium content in MOX will evolve to ratios in excess of 10%. It shall be, therefore, important to know the irradiation behavior of MOX with high plutonium content of more than 10 wt%. MOX fuel rods having a plutonium content of about 14 wt% and fabricated by use of MIMAS process have been irradiated under PWR conditions in the Belgian test reactors BR-3 and BR-2. The peak fuel rod burn-up of the fuel rods studied in this paper ranges from 31 to 37 GWd/t-HM, and their average burnup is about 22-26 GWd/t-HM with the rod averaged linear heat generation rate of about 15-21 kW/m. The MOX rods are investigated by destructive and non-destructive post irradiation examinations and some of them are now continued to be irradiated in BR-2. Mixed Oxide (U,Pu)O{sub 2} fuel produced by the MIMAS process results in a fine dispersion of Pu enriched particles in a UO{sub 2} matrix and effectively gives three enrichment classes: low, medium and high enriched. The high enriched particles (often called 'Pu spots'), have an enrichment of around 25 wt% Pu, the low enriched phase is the UO{sub 2} matrix and contains only trace amounts of Pu. An

  10. Concerted suppression of all starch branching enzyme genes in barley produces amylose-only starch granules

    DEFF Research Database (Denmark)

    Carciofi, Massimiliano; Blennow, Andreas; Jensen, Susanne L;

    2012-01-01

    yield in a living organism. This was achieved by a new method of simultaneous suppression of the entire complement of genes encoding starch branching enzymes. We demonstrate that amylopectin is not essential for starch granule crystallinity and integrity. However the slower initial growth of shoots from...... amylose-only grains may be due to an important physiological role played by amylopectin ordered crystallinity for rapid starch remobilization explaining the broad conservation in the plant kingdom of the amylopectin structure....

  11. Synthesis and Characterization of Mesoporous Silicon Oxynitride MCM-41 with High Nitrogen Content

    Institute of Scientific and Technical Information of China (English)

    ZHANG Cunman; XU Zheng; LIU Qian

    2005-01-01

    Mesoporous silicon oxynitrides MCM-41 were synthesized successfully. The resulting materials not only have high nitrogen contents and good structural characteristics of MCM-41 (high surface area, narrow pore size distribution and good order), but also are amorphous. The composition and structure of the materials were investigated by CNH element analysis, XPS, Si MAS NMR, XRD, HRTEM and N2 sorption, respectively. Mesoporous silicon oxynitrides MCM-41 with a high nitrogen content are still non-crystal (amorphous).

  12. The influence of amylose-LPC complex formation on the susceptibility of wheat starch to amylase.

    Science.gov (United States)

    Ahmadi-Abhari, S; Woortman, A J J; Oudhuis, A A C M; Hamer, R J; Loos, K

    2013-09-12

    This study was aimed to assess the role of lysophosphatidylcholine (LPC) in the development of slowly digestible starch (SDS). The influence of LPC, on the enzymatic degradation of diluted 9% wheat starch suspensions (w/w) was investigated, using an in vitro digestion method. Wheat starch suspensions containing 0.5-5% LPC (based on starch) were heated in a Rapid Visco Analyser (RVA) till 95 °C and subjected to enzyme hydrolysis by porcine pancreatic α-amylase at 37 °C for several digestion periods. In vitro digestion measurements demonstrated that complexing starch with 5% LPC leads to a 22% decrease in rate of reducing sugar compared to the reference while the samples containing 0.5% LPC showed an equal digestibility comparable to the control. A clear decrease in the formation of reducing sugars was observed in presence of 2-5% LPC, since the results after 15 min digestion imply the formation of SDS due to the formation of amylose-LPC inclusion complexes. The DSC measurements proved the presence of amylose-LPC inclusion complexes even after 240 min digestion demonstrating the low susceptibility of amylose-V complexes to amylase.

  13. Method of preparing a high solids content, low viscosity ceramic slurry

    Science.gov (United States)

    Tiegs, Terry N.; Wittmer, Dale E.

    1995-01-01

    A method for producing a high solids content, low viscosity ceramic slurry composition comprises turbomilling a dispersion of a ceramic powder in a liquid to form a slurry having a viscosity less than 100 centipoise and a solids content equal to or greater than 48 volume percent.

  14. Content-Based Curriculum for High-Ability Learners, Second Edition

    Science.gov (United States)

    VanTassel-Baska, Joyce, Ed.; Little, Catherine A., Ed.

    2011-01-01

    The newly updated "Content-Based Curriculum for High-Ability Learners" provides a solid introduction to curriculum development in gifted and talented education. Written by experts in the field of gifted education, this text uses cutting-edge design techniques and aligns the core content with national and state standards. In addition to a revision…

  15. Devclopment of the Forage Riees WithHigh Protein Gontent in Hunan

    Institute of Scientific and Technical Information of China (English)

    2000-01-01

    @@The meaning of the high protein forage rices Rices may be classified by itsuses as human'sfood.animal's on poultry's feed,or the raw materials of various industries.For ricesused as people's food.its breeding objectives are focused on the varietal characters such as medium amylose content .high rale of head rice.hyaline smoothmilled grains and delicious taste:for those used in making rice meal.beer,gourmet powder,etc.specially on high amylose content:while in wine making,it should be focused on big white belly and white beart,but low protein content in particular.As for the rices used as feed,the most important is its high rate of pre -protein in the brown rice ,leaving its grain appearance out of consideration.Thcrefore,the so called forage rice (FR)sgiykd be a kind of paddy rice with high pre-protein content of brown rice(≥8.25%)and high grain yicld (≥8.25t/ha),to be used as the composition of the animal feed by applying cultivation management oplimized under the suitable growth duration and strong pest resistance.

  16. Composition and Content of High-Molecular-Weight Glutenin Subunits and Their Effects on Wheat Quality

    Institute of Scientific and Technical Information of China (English)

    SONG Jian-min; LIU Ai-feng; WU Xiang-yun; LIU Jian-jun; ZHAO Zhen-dong; LIU Guang-tian

    2002-01-01

    Sedimentation values, flour glutenin macropolymer (GMP) contents, composition and contents of high-molecular-weight (HMW) glutenin subunits (GS) of 233 flour samples were determined. Our data indicated that subunit 1 occurred more frequently at Glu-A1, subunit pair 7 + 8 at Glu- B1 and 2 + 12 at Glu-D1. The significant relationships between Glu-1 quality score and total HMW glutenin content, sedimentation value and GMP content suggested that the composition of HMW-GS affects wheat quality strongly. Moreover,the total content of HMW-GS was correlated with certain quality parameters more significantly. Relationship between subunit 5 + 10 content and breadmaking quality was better than others, but 2 + 12, 7 + 8, 7 + 9 and 4 + 12 also correlated with certain quality parameters significantly. The contents of total HMW-glutenin, x-type subunits and y-type subunits related with sedimentation value, flour GMP content, and Glu-1 quality score more strongly than that of individual subunit or subunit pair. The flour GMP content, with excellent correlation to sedimentation value, total contents of HMW glutenin, x- and y-type subunits and many other quality parameters, could be an ideal indicator of breadmaking quality at earlier generations for breeding purpose for its simple procedure and small scale.

  17. High Seas High Schoolers: Creating ERESE Content on an Expedition to Samoa

    Science.gov (United States)

    Delaney, R.; English, B.; Staudigel, D.; Staudigel, H.; Koppers, A.; Hart, S.

    2005-12-01

    As part of the ERESE program, three high school seniors aboard the ALIA expedition generated contents and published a live trip website with a wide range of information about the science and personal aspects of the cruise. These activities served to relate as much meaningful information about the month-long research cruise in the South Pacific as possible, to people of all ages and skills. The website http://earthref.org/ERESE/projects/ALIA/ has reports on almost every aspect of the research cruise; from what it is like staying on the Research Vessel Kilo Moana for a month, to operating machinery, to interviews with the captain and chief scientists, and even how the equipment aboard works, in less than technical terms. An effective way to relay what was actually going on aboard the Kilo Moana, were the daily reports, written by the high school students, complete with the pictures and videos taken that day. This website connected the ALIA cruise to high school students and classrooms, who were following the expedition through the website both in the United States and in Samoa. High school seniors designed and implemented the "CruiseWatch" feature on the Alia website. This "applet" extracts data from the shipboard datastream and relays them to the ERESE website at the San Diego Supercomputing center via satellite, where they are prepared for real-time display on the cruise website. Data displayed include the ships' location on the map, geographic coordinates, heading, speed and wind speed. During dredging operations it displays the length of wire deployed, wire speed and wire tension. Overall the website with the daily reports and photographs, in addition to other web media, gave this trip a unique ability to engage people from around the world in researching oceanographic and geological phenomena.

  18. Adapting human pluripotent stem cells to high-throughput and high-content screening.

    Science.gov (United States)

    Desbordes, Sabrina C; Studer, Lorenz

    2013-01-01

    The increasing use of human pluripotent stem cells (hPSCs) as a source of cells for drug discovery, cytotoxicity assessment and disease modeling requires their adaptation to large-scale culture conditions and screening formats. Here, we describe a simple and robust protocol for the adaptation of human embryonic stem cells (hESCs) to high-throughput screening (HTS). This protocol can also be adapted to human induced pluripotent stem cells (hiPSCs) and high-content screening (HCS). We also describe a 7-d assay to identify compounds with an effect on hESC self-renewal and differentiation. This assay can be adapted to a variety of applications. The procedure involves the culture expansion of hESCs, their adaptation to 384-well plates, the addition of small molecules or other factors, and finally data acquisition and processing. In this protocol, the optimal number of hESCs plated in 384-well plates has been adapted to HTS/HCS assays of 7 d.

  19. REQUIREMENT OF FLUIDITY OF HIGH WATER CONTENT MATERIALS FORTHE GETWAY-SIDE BACKFILLING TECHNIQUE

    Institute of Scientific and Technical Information of China (English)

    QiTaiyue; MaNianjie

    1996-01-01

    Through analyzing the effects of water consumption, diameter of solid particle, and flow velocity on the fluidity of high water content material slurry, the relationship among the fluidity, the isotropy of the slurry, and the pumping facilities applied in getway-side backfilling has been found. And the requirment of fluidity of high water content material for the design of getway-side backfilling technique is put forward in the paper.

  20. A degradation model for high kitchen waste content municipal solid waste.

    Science.gov (United States)

    Chen, Yunmin; Guo, Ruyang; Li, Yu-Chao; Liu, Hailong; Zhan, Tony Liangtong

    2016-12-01

    Municipal solid waste (MSW) in developing countries has a high content of kitchen waste (KW), and therefore contains large quantities of water and non-hollocellulose degradable organics. The degradation of high KW content MSW cannot be well simulated by the existing degradation models, which are mostly established for low KW content MSW in developed countries. This paper presents a two-stage anaerobic degradation model for high KW content MSW with degradations of hollocellulose, sugars, proteins and lipids considered. The ranges of the proportions of chemical compounds in MSW components are summarized with the recommended values given. Waste components are grouped into rapidly or slowly degradable categories in terms of the degradation rates under optimal water conditions for degradation. In the proposed model, the unionized VFA inhibitions of hydrolysis/acidogenesis and methanogenesis are considered as well as the pH inhibition of methanogenesis. Both modest and serious VFA inhibitions can be modeled by the proposed model. Default values for the parameters in the proposed method can be used for predictions of degradations of both low and high KW content MSW. The proposed model was verified by simulating two laboratory experiments, in which low and high KW content MSW were used, respectively. The simulated results are in good agreement with the measured data of the experiments. The results show that under low VFA concentrations, the pH inhibition of methanogenesis is the main inhibition to be considered, while the inhibitions of both hydrolysis/acidogenesis and methanogenesis caused by unionized VFA are significant under high VFA concentrations. The model is also used to compare the degradation behaviors of low and high KW content MSW under a favorable environmental condition, and it shows that the gas potential of high KW content MSW releases more quickly.

  1. Enhanced ethanol fermentation by engineered Saccharomyces cerevisiae strains with high spermidine contents.

    Science.gov (United States)

    Kim, Sun-Ki; Jo, Jung-Hyun; Jin, Yong-Su; Seo, Jin-Ho

    2017-05-01

    Construction of robust and efficient yeast strains is a prerequisite for commercializing a biofuel production process. We have demonstrated that high intracellular spermidine (SPD) contents in Saccharomyces cerevisiae can lead to improved tolerance against various fermentation inhibitors, including furan derivatives and acetic acid. In this study, we examined the potential applicability of the S. cerevisiae strains with high SPD contents under two cases of ethanol fermentation: glucose fermentation in repeated-batch fermentations and xylose fermentation in the presence of fermentation inhibitors. During the sixteen times of repeated-batch fermentations using glucose as a sole carbon source, the S. cerevisiae strains with high SPD contents maintained higher cell viability and ethanol productivities than a control strain with lower SPD contents. Specifically, at the sixteenth fermentation, the ethanol productivity of a S. cerevisiae strain with twofold higher SPD content was 31% higher than that of the control strain. When the SPD content was elevated in an engineered S. cerevisiae capable of fermenting xylose, the resulting S. cerevisiae strain exhibited much 40-50% higher ethanol productivities than the control strain during the fermentations of synthetic hydrolysate containing high concentrations of fermentation inhibitors. These results suggest that the strain engineering strategy to increase SPD content is broadly applicable for engineering yeast strains for robust and efficient production of ethanol.

  2. Development of a New Foxtail Millet Germplasm with Super Early Maturity and High Iron Content

    Institute of Scientific and Technical Information of China (English)

    LIU Zheng-li; SUN Shi-xian; CHENG Ru-hong; HUANG Wen-sheng; LIU Jun-xin; QU Zhu-feng; XIA Xue-yan; SHI Zhi-gang

    2006-01-01

    Super Early Maturation No.2 is a new foxtail millet germplasm developed by using the targeted-character-gene-bankbreeding method. It has several outstanding characteristics. (1) Super early maturity. It can normally mature in Bashang,Hebei Province, China, where the altitude is around 1 400 meters, and it needs 1 650℃ of effective accumulated temperature in the growing period. (2) Millet is rich in iron. The iron content of the millet of Super Early Maturation No.2 is 54.10 mg kg-1,which is 62.0% higher than the average iron content of the foxtail millet varieties in China. (3) High crude fat content. Its crude fat content is 6.24%, which is 54.1% higher than the average content of foxtail millet varieties in China. (4) High crude protein content. The average of the crude protein content of all the foxtail millet varieties in China is 12.71%, only5% varieties surpass 14%, however, the crude protein content of Super Early Maturation No.2 is 14.36%, which is rare in improved varieties of foxtail millet in China. (5) Overall characteristics are good.

  3. High-content screening of yeast mutant libraries by shotgun lipidomics

    DEFF Research Database (Denmark)

    Tarasov, Kirill; Stefanko, Adam; Casanovas, Albert;

    2014-01-01

    To identify proteins with a functional role in lipid metabolism and homeostasis we designed a high-throughput platform for high-content lipidomic screening of yeast mutant libraries. To this end, we combined culturing and lipid extraction in 96-well format, automated direct infusion nanoelectrosp......To identify proteins with a functional role in lipid metabolism and homeostasis we designed a high-throughput platform for high-content lipidomic screening of yeast mutant libraries. To this end, we combined culturing and lipid extraction in 96-well format, automated direct infusion...... factor KAR4 precipitated distinct lipid metabolic phenotypes. These results demonstrate that the high-throughput shotgun lipidomics platform is a valid and complementary proxy for high-content screening of yeast mutant libraries....

  4. Effect of high temperature and excessive light on glutathione content in apple peel

    Institute of Scientific and Technical Information of China (English)

    Jianguang ZHANG; Shaochun CHEN; Yingli LI; Bao DI; Jianqiang ZHANG; Yufang LIU

    2008-01-01

    The present experiment was conducted to examine the changing patterns of glutathione (GSH) contents in apple peel stressed by high temperature and excessive solar radiation. By comparing the parameters of temperature and light conditions where fruits grow with the GSH contents in them, the mutual relationship was disclosed. Meanwhile, the changes of antioxidant capacity of fruits stressed at different levels were studied under artificially controlled conditions in a laboratory. Also, the effect of applying various types of exogenous substances was evaluated on endogenous GSH contents. The results indicated that within a certain range, a positive correlation was found between the stressed extents to which fruits were subject by high temperature and exces-sive light, and GSH contents in fruit peel. Moreover, fruits on southwest (SW) exposure contained a very significantly higher amount of GSH than those on other exposures. In laboratory experiments, it was proved that fruit GSH contents increased with temperatures within a certain range but they declined beyond a given limit. The temperature rising modes had a great influence on fruit GSH contents, and gradual tem-perature increase was favorable to an increase of antioxidant capability in fruit peel, thus providing a theoretical basis for exerting appropriate acclimation on fruits. It was also docu-mented that application of four exogenous formulations could significantly increase the endogenous GSH contents, among which AsA (ascorbit acid)+BA (benzoic acid) and SA (sali-cylic acid) treatments exhibited better results, 33.97% and 31.81% higher than the control, respectively.

  5. DSC studies of gamma irradiation influence on gelatinisation and amylose-lipid complex transition occurring in wheat starch[Wheat starch; Gelatinisation; Amylose-lipid complex transition; Gamma irradiation; Differential scanning calorimetry, DSC

    Energy Technology Data Exchange (ETDEWEB)

    Ciesla, K. E-mail: kciesla@orange.ichtj.waw.pl; Eliasson, A.-C

    2003-12-01

    Differential scanning calorimetry studies are presented dealing with the influence of gamma irradiation (carried out in the solid state) on the structure of amylose-lipid complex in wheat starch. Suspensions of the control and the wheat starch irradiated with a 30 kGy gamma rays (characterised by starch-to-water ratio of 1:1 and ca. 1:4) were examined during several courses of heating and cooling at rates of 2.5 and 10 deg. C min{sup -1}. Differences were observed between enthalpy and temperature of gelatinisation and amylose-lipid complex transition as well as retrogradation taking place in the suspensions and gels of the control and the irradiated starch. The influence of the preceding heating and cooling on further transformations of the amylose-lipid complex differs for the control and the irradiated samples.

  6. Optimisation of rubberised concrete with high rubber content: an experimental investigation

    OpenAIRE

    Raffoul, S.; Garcia, R; Pilakoutas, K.; Guadagnini, M.; Flores Medina, N.

    2016-01-01

    This article investigates experimentally the behaviour of rubberised concrete (RuC) with high rubber content so as to fully utilise the mechanical properties of vulcanised rubber. The fresh properties and short-term uniaxial compressive strength of 40 rubberised concrete mixes were assessed. The parameters examined included the volume (0–100%) and type of mineral aggregate replacement (fine or coarse), water or admixture contents, type of binder, rubber particle properties, and rubber surface...

  7. Assessment of the influence of amylose-LPC complexation on the extent of wheat starch digestibility by size-exclusion chromatography

    NARCIS (Netherlands)

    Ahmadiabhari, Salomeh; Woortman, A. J. J.; Hamer, R. J.; Loos, K.

    2013-01-01

    Amylose forms inclusion complexes with lysophosphatidylcholine (LPC), that decrease the susceptibility of amylose to amylase degradation. This study on the influence of complexation on starch susceptibility to amylase explains the nature of this protective effect. Wheat starch suspensions (9% w/w) c

  8. Assessment of the influence of amylose-LPC complexation on the extent of wheat starch digestibility by size-exclusion chromatography

    NARCIS (Netherlands)

    Ahmadi-Abhari, S.; Woortman, A.J.J.; Hamer, R.J.; Loos, K.

    2013-01-01

    Amylose forms inclusion complexes with lysophosphatidylcholine (LPC), that decrease the susceptibility of amylose to amylase degradation. This study on the influence of complexation on starch susceptibility to amylase explains the nature of this protective effect. Wheat starch suspensions (9% w/w) c

  9. High and Low Consensus Groups: A Content and Relational Interaction Analysis.

    Science.gov (United States)

    DeStephen, Rolayne S.

    1983-01-01

    Analyzed the complete interaction of high and low consensus groups in a basic small group course. Interaction analysis indicated that both the relational and content levels of communication are significantly different for high versus low consensus groups. The conclusion that increased feedback leads to decision satisfaction was confirmed. (JAC)

  10. Innovation management and marketing in the high-tech sector: A content analysis of advertisements

    DEFF Research Database (Denmark)

    Gerhard, D.; Brem, Alexander; Baccarella, Ch.

    2011-01-01

    Advertizing high-technology products is a tricky and critical task for every company, since it means operating in an environment with high market uncertainty. The work presents results of a content analysis of 110 adverts for consumer electronics products which examines how these products and the...

  11. Effect of high temperature on the expressions of genes encoding starch synthesis enzymes in developing rice endosperms

    Institute of Scientific and Technical Information of China (English)

    CAO Zhen-zhen; PAN Gang; WANG Fu-biao; WEI Ke-su; LI Zhao-wei; SHI Chun-hai; GENG Wei; CHENG Fang-min

    2015-01-01

    High temperature is the major environmental factor affecting grain starch properties of cooking rice cultivars. In this study, two non-waxy indica rice genotypes, cv. 9311 and its mutant with extremely high amylose phenotype (9311eha) were used to study the differential expressions of genes in starch synthesis and their responses to high temperature (HT). Signiifcant increase in apparent amylose content and hot-water-soluble starch content in mutant 9311eha were genetical y caused by a substitution from AGTTATA to AGGTATA at the leader intron 5´ splice site in Wx gene. This mutation resulted in different mRNA transcript levels, mRNA splicing efifciencies and protein levels of Wx between the two rice genotypes, which also lead to the genotype-dependent alteration in the temporal pattern of Wx transcription and granule-bound starch synthase (GBSS) activity in response to HT. However, changes in the activities of other starch synthesizing enzymes and their expressions of distinct isoform genes were not signiifcant with the Wx gene mutation, thus only minor difference in the particle size of starch granule, chain-length distribution and gelatinization enthalpy were found between the two genotypes. The tempo-ral-speciifc expression of multiple isoform genes responsive to different temperature regiments indicated that the reduction of GBSS transcript expression under HT was general y accompanied by the decreased expressions of SSSIIa, SSSIIIa and SBEIIb. Consequently, high temperature-ripened grains in 9311eha showed high proportion of intermediate and long B chains and somewhat lower level of short A chain compared to the wildtype. The temperature-dependent alteration of amylose content was not only attributed to the reduced expression of GBSS, but also associated with the complimentary effect of SSSIIa and SBEIIb.

  12. Evaluation of Compatibility of ToxCast High-Throughput/High-Content Screening Assays with Engineered Nanomaterials

    Science.gov (United States)

    High-throughput and high-content screens are attractive approaches for prioritizing nanomaterial hazards and informing targeted testing due to the impracticality of using traditional toxicological testing on the large numbers and varieties of nanomaterials. The ToxCast program a...

  13. DSC studies of gamma irradiation influence on gelatinisation and amylose-lipid complex transition occurring in wheat starch

    Science.gov (United States)

    Cieśla, K.; Eliasson, A.-C.

    2003-12-01

    Differential scanning calorimetry studies are presented dealing with the influence of gamma irradiation (carried out in the solid state) on the structure of amylose-lipid complex in wheat starch . Suspensions of the control and the wheat starch irradiated with a 30 kGy gamma rays (characterised by starch-to-water ratio of 1:1 and ca. 1:4) were examined during several courses of heating and cooling at rates of 2.5 and 10°C min -1. Differences were observed between enthalpy and temperature of gelatinisation and amylose-lipid complex transition as well as retrogradation taking place in the suspensions and gels of the control and the irradiated starch. The influence of the preceding heating and cooling on further transformations of the amylose-lipid complex differs for the control and the irradiated samples.

  14. Calculation Method to Determine the Group Composition of Vacuum Distillate with High Content of Saturated Hydrocarbons

    Directory of Open Access Journals (Sweden)

    Nazarova Galina

    2016-01-01

    Full Text Available Calculation method to determine the group composition of the heavy fraction of vacuum distillate with high content of saturated hydrocarbons, obtained by vacuum distillation of the residue from the West Siberian oil with subsequent hydrotreating, are given in this research. The method is built on the basis of calculation the physico-chemical characteristics and the group composition of vacuum distillate according to the fractional composition and density considering with high content of saturated hydrocarbons in the fraction. Calculation method allows to determine the content of paraffinic, naphthenic, aromatic hydrocarbons and the resins in vacuum distillate with high accuracy and can be used in refineries for rapid determination of the group composition of vacuum distillate.

  15. Graph cut and image intensity-based splitting improves nuclei segmentation in high-content screening

    Science.gov (United States)

    Farhan, Muhammad; Ruusuvuori, Pekka; Emmenlauer, Mario; Rämö, Pauli; Yli-Harja, Olli; Dehio, Christoph

    2013-02-01

    Quantification of phenotypes in high-content screening experiments depends on the accuracy of single cell analysis. In such analysis workflows, cell nuclei segmentation is typically the first step and is followed by cell body segmentation, feature extraction, and subsequent data analysis workflows. Therefore, it is of utmost importance that the first steps of high-content analysis are done accurately in order to guarantee correctness of the final analysis results. In this paper, we present a novel cell nuclei image segmentation framework which exploits robustness of graph cut to obtain initial segmentation for image intensity-based clump splitting method to deliver the accurate overall segmentation. By using quantitative benchmarks and qualitative comparison with real images from high-content screening experiments with complicated multinucleate cells, we show that our method outperforms other state-of-the-art nuclei segmentation methods. Moreover, we provide a modular and easy-to-use implementation of the method for a widely used platform.

  16. Optimization of the Content of Tricalcium Silicate of High Cementing Clinker

    Institute of Scientific and Technical Information of China (English)

    CHEN Lin; SHEN Xiaodong; MA Suhua; HUANG Yeping; ZHONG Baiqian

    2011-01-01

    Optimization of the content of tricalcium silicate (C3S) of high cementing clinker was investigated. The content of free-CaO(f-CaO), mineral composite, the content of C3S in the clinker and the hydration product were analyzed by chemical analysis and X-ray diffraction (XRD). "K Value" method of QXRD was selected as a quantitative analysis way to measure the content of C3S, and the strength of cement paste was determined. The results show that at a water cement ratio of 0.29, the strength of cement paste with 73% C3S can be up to 97.5 MPa at 28 days age. The strength at 28 d of cement with 73% C3S is 16% higher than that with 78% C3S at water requirement for normal consistency. The relationship between the strength of high cementing Portland cement and the content of C3S in the clinker is nonlinear. According to the strength of cement paste, the optimal content of C3S in cement clinker is around 73% in this paper.

  17. Decreased adipose tissue zinc content is associated with metabolic parameters in high fat fed Wistar rats

    Directory of Open Access Journals (Sweden)

    Alexey A. Tinkov

    2016-03-01

    Full Text Available Background. Limited data on adipose tissue zinc content in obesity exist. At the same time, the association between adipose tissue zinc content and metabolic parameters in dietary-induced obesity is poorly studied. Therefore, the primary objective of this study is to assess adipose tissue zinc content and its association  with morphometric parameters, adipokine spectrum, proinflammatory cytokines, and apolipoprotein profile in high fat fed Wistar rats. Material and methods. A total of 48 adult female Wistar rats were used in the present study. Rats were fed either control (10% of fat or high fat diet (31.6% of fat. Adipose tissue zinc content was assessed using inductively coupled plasma mass spectrometry. Rats’ serum was examined for adiponectin, leptin, insulin, interleukin-6, and tumor necrosis factor-α using enzyme-linked immunosorbent assay kits. Serum glucose and apolipoprotein spectrum were also evaluated. Results. High fat feeding resulted in a significant 34% decrease in adipose tissue zinc content in comparison to the control values. Fat pad zinc levels were significantly inversely associated with morphometric param- eters, circulating leptin, insulin, tumor necrosis factor-α levels and HOMA-IR values. At the same time,      a significant correlation with apolipoprotein A1 concentration was observed. Conclusion. Generally, the obtained data indicate that (1 high fat feeding results in decreased adipose tis- sue zinc content; (2 adipose tissue zinc content is tightly associated with excessive adiposity, inflammation, insulin resistance and potentially atherogenic changes.

  18. Low phytic acid 1 mutation in maize modifies density, starch properties, cations, and fiber contents in the seed.

    Science.gov (United States)

    Landoni, Michela; Cerino Badone, Francesco; Haman, Nabil; Schiraldi, Alberto; Fessas, Dimitrios; Cesari, Valentina; Toschi, Ivan; Cremona, Roberta; Delogu, Chiara; Villa, Daniela; Cassani, Elena; Pilu, Roberto

    2013-05-15

    Monogastric animals are unable to digest phytic acid, so it represents an antinutritional factor and also an environmental problem. One strategy to solve this problem is the utilization of low phytic acid (lpa) mutants that accumulate low levels of phytic P and high levels of free phosphate in the seeds; among the lpa maize mutants lpa1 exhibited the highest reduction of phytic acid in the seed. This study indicated that the low phytic acid mutations exerted pleiotropic effects not directly connected to the phytic acid pathway, such as on seed density, content of ions, and the antioxidant compounds present in the kernels. Furthermore some nutritional properties of the flour were altered by the lpa1 mutations, in particular lignin and protein content, while the starch does not seem to be modified as to the total amount and in the amylose/amylopectin ratio, but alterations were noticed in the structure and size of granules.

  19. Magnetic and mechanical properties of FeSi alloys with high Si content

    Institute of Scientific and Technical Information of China (English)

    LU Feng-shuang; QIAO Liang; BI Xiao-fang

    2006-01-01

    The chemical vapor(CVD) deposition-diffusion method was applied to prepare FeSi alloys with high silicon content up to 6.5%. In spite of various deposition and post-annealing, the sample remains α-Fe bcc structure. The cross section of the composition was analyzed to evaluate the Si content and distribution before and after annealing. The results show that the soft magnetic properties are improved by increasing the silicon content. For the samples containing about 6.5% Si, the coercivity decreases to 60 from 237.3 A/m of the original. It is also obtained that, in addition to the Si content, Si distribution has a large influence on the core loss due to the effect of resistivity. The micro-hardnesses were also evaluated along the cross-section after various annealings.

  20. High-content single-cell analysis on-chip using a laser microarray scanner.

    Science.gov (United States)

    Zhou, Jing; Wu, Yu; Lee, Sang-Kwon; Fan, Rong

    2012-12-07

    High-content cellomic analysis is a powerful tool for rapid screening of cellular responses to extracellular cues and examination of intracellular signal transduction pathways at the single-cell level. In conjunction with microfluidics technology that provides unique advantages in sample processing and precise control of fluid delivery, it holds great potential to transform lab-on-a-chip systems for high-throughput cellular analysis. However, high-content imaging instruments are expensive, sophisticated, and not readily accessible. Herein, we report on a laser scanning cytometry approach that exploits a bench-top microarray scanner as an end-point reader to perform rapid and automated fluorescence imaging of cells cultured on a chip. Using high-content imaging analysis algorithms, we demonstrated multiplexed measurements of morphometric and proteomic parameters from all single cells. Our approach shows the improvement of both sensitivity and dynamic range by two orders of magnitude as compared to conventional epifluorescence microscopy. We applied this technology to high-throughput analysis of mesenchymal stem cells on an extracellular matrix protein array and characterization of heterotypic cell populations. This work demonstrates the feasibility of a laser microarray scanner for high-content cellomic analysis and opens up new opportunities to conduct informative cellular analysis and cell-based screening in the lab-on-a-chip systems.

  1. Enzymatic Hydrolysis of biomasses having a high dry matter (DM) content

    DEFF Research Database (Denmark)

    2010-01-01

    The present invention relates to a process for liquefaction and saccharification of polysaccharide containing biomasses, having a relatively high dry matter content. The present invention combines enzymatic hydrolysis with a type of mixing relying on the principle of gravity ensuring that the bio......The present invention relates to a process for liquefaction and saccharification of polysaccharide containing biomasses, having a relatively high dry matter content. The present invention combines enzymatic hydrolysis with a type of mixing relying on the principle of gravity ensuring...

  2. Multi Feature Content Based Video Retrieval Using High Level Semantic Concept

    Directory of Open Access Journals (Sweden)

    Hamdy K. Elminir

    2012-07-01

    Full Text Available Content-based retrieval allows finding information by searching its content rather than its attributes. The challenge facing content-based video retrieval (CBVR is to design systems that can accurately and automatically process large amounts of heterogeneous videos. Moreover, content-based video retrieval system requires in its first stage to segment the video stream into separate shots. Afterwards features are extracted for video shots representation. And finally, choose a similarity/distance metric and an algorithm that is efficient enough to retrieve query - related videos results. There are two main issues in this process; the first is how to determine the best way for video segmentation and key frame selection. The second is the features used for video representation. Various features can be extracted for this sake including either low or high level features. A key issue is how to bridge the gap between low and high level features. This paper proposes a system for a content based video retrieval system that tries to address the aforementioned issues by using adaptive threshold for video segmentation and key frame selection as well as using both low level features together with high level semantic object annotation for video representation. Experimental results show that the use of multi features increases both precision and recall rates by about 13% to 19 % than traditional system that uses only color feature for video retrieval.

  3. Innovation management and marketing in the high-tech sector: A content analysis of advertisements

    DEFF Research Database (Denmark)

    Gerhard, D.; Brem, Alexander; Baccarella, Ch.

    2011-01-01

    Advertizing high-technology products is a tricky and critical task for every company, since it means operating in an environment with high market uncertainty. The work presents results of a content analysis of 110 adverts for consumer electronics products which examines how these products...... and the incorporated technology are communicated to the customer. Based on established coding schemes, the content and the appeals of the adverts are evaluated by coders. The results show that these adverts are very informative, mainly have rational appeals and feature products being in the early stage of their life...... cycles. Regarding the specific content, the ‘mother brand’ is shown to play a very important role. On the other hand, the results show that incorporated technology, its superiority and functionality do not play an important role in the advertisements...

  4. DSC studies of retrogradation and amylose lipid complex transition taking place in gamma irradiated wheat starch

    Science.gov (United States)

    Cieśla, K.; Eliasson, A. C.

    2007-12-01

    The effect of gamma irradiation ( 60Co) with doses of 5-30 kGy on the amylose-lipid complex transition and retrogradation occurring in gels containing ca. 50% and ca. 20% wheat starch was studied by differential scanning calorimetry (DSC) during heating-cooling-heating cycles (up to three cycles). Transition of the amylose-lipid complex occurs in all the irradiated samples at a lower temperature as compared to the non-irradiated starch. That effect was larger when the radiation dose was higher. A further thermal treatment causes a decrease of the transition temperature in the irradiated samples, with no effect or increase of that temperature observed for the non-irradiated ones. Irradiation hinders retrogradation taking place in 50% gels but facilitates the process occurring in 20% gels. The differences between the irradiated and the non-irradiated samples are more evident in the every next heating or cooling cycle as well as after storage and in the case of ca. 50% suspensions as compared to ca. 20% suspensions. The results point out to the deterioration of the structure of the complexes formed in the irradiated starch as compared to the non-irradiated one.

  5. Effect of waxy (Low Amylose) on Fungal Infection of Sorghum Grain.

    Science.gov (United States)

    Funnell-Harris, Deanna L; Sattler, Scott E; O'Neill, Patrick M; Eskridge, Kent M; Pedersen, Jeffrey F

    2015-06-01

    Loss of function mutations in waxy, encoding granule bound starch synthase (GBSS) that synthesizes amylose, results in starch granules containing mostly amylopectin. Low amylose grain with altered starch properties has increased usability for feed, food, and grain-based ethanol. In sorghum, two classes of waxy (wx) alleles had been characterized for absence or presence of GBSS: wx(a) (GBSS(-)) and wx(b) (GBSS(+), with reduced activity). Field-grown grain of wild-type; waxy, GBSS(-); and waxy, GBSS(+) plant introduction accessions were screened for fungal infection. Overall, results showed that waxy grains were not more susceptible than wild-type. GBSS(-) and wild-type grain had similar infection levels. However, height was a factor with waxy, GBSS(+) lines: short accessions (wx(b) allele) were more susceptible than tall accessions (undescribed allele). In greenhouse experiments, grain from accessions and near-isogenic wx(a), wx(b), and wild-type lines were inoculated with Alternaria sp., Fusarium thapsinum, and Curvularia sorghina to analyze germination and seedling fitness. As a group, waxy lines were not more susceptible to these pathogens than wild-type, supporting field evaluations. After C. sorghina and F. thapsinum inoculations most waxy and wild-type lines had reduced emergence, survival, and seedling weights. These results are valuable for developing waxy hybrids with resistance to grain-infecting fungi.

  6. Preparation and structural characterization of turbostratic-carbon/graphene derived from amylose film

    Science.gov (United States)

    Sazali, N. E. S.; Deraman, M.; Omar, R.; Othman, M. A. R.; Suleman, M.; Shamsudin, S. A.; Tajuddin, N. S. M.; Hanappi, M. F. Y. M.; Hamdan, E.; Nor, N. S. M.; Basri, N. H.

    2016-11-01

    In this study, we report the preparation of turbostratic-carbon/graphene from biomass amylose film by carbonization (N2 gas) and activation (CO2 gas) over different temperatures 600, 700, 800, 900, and 1000 °C, respectively. The Raman spectroscopy results of the produced samples show that the values of the ID/IG ratio ranging from 0.75 to 0.99 are comparable to that of the commercial multilayer graphene and KOH treated multilayer graphene. The X-ray diffraction results of the produced samples show that a small decrease in the d002 (˜0.62 %) and d100 (˜0.57 %) values and a larger decrease in Lc (˜8.6 %) and La (˜27.2 %) values occurs as the carbonization and activation temperature increases, indicating that the increase in temperature has an effect on the growth of microcrystallites during carbonization and activation. This study demonstrates the potential of the amylose film to be used as a precursor for producing graphene flakes.

  7. Ethanol production from food waste at high solid contents with vacuum recovery technology

    Science.gov (United States)

    Ethanol production from food wastes does not only solve the environmental issues but also provide renewable biofuel to partially substitute fossil fuels. This study investigated the feasibility of utilization of food wastes for producing ethanol at high solid contents (35%, w/w). Vacuum recovery sys...

  8. Cultural Parallax and Content Analysis: Images of Black Women in High School History Textbooks

    Science.gov (United States)

    Woyshner, Christine; Schocker, Jessica B.

    2015-01-01

    This study investigates the representation of Black women in high school history textbooks. To examine the extent to which Black women are represented visually and to explore how they are portrayed, the authors use a mixed-methods approach that draws on analytical techniques in content analysis and from visual culture studies. Their findings…

  9. Exceptional heat stability of high protein content dispersions containing whey protein particles

    NARCIS (Netherlands)

    Saglam, D.; Venema, P.; Vries, de R.J.; Linden, van der E.

    2014-01-01

    Due to aggregation and/or gelation during thermal treatment, the amount of whey proteins that can be used in the formulation of high protein foods e.g. protein drinks, is limited. The aim of this study was to replace whey proteins with whey protein particles to increase the total protein content and

  10. The content and role of formal contracts in high-tech alliances

    NARCIS (Netherlands)

    Jong, G. de; Klein Woolthuis, R.J.A.

    2009-01-01

    In this study we investigate the governance structure of innovation processes in high-tech alliances, focusing on the content and role of formal contracts. The design of a formal agreement is one of the most important strategic decisions for alliance partners. Drawing upon transaction cost arguments

  11. [Determination of high content of tin in geochemical samples by solid emission spectrometry].

    Science.gov (United States)

    Yao, Jian-Zhen; Hao, Zhi-Hong; Tang, Rui-Ling; Li, Xiao-Jing; Li, Wen-Ge; Zhang, Qin

    2013-11-01

    A method for the determination of high content of tin in geochemical samples by solid emission spectrometry was presented. The dedicated high content tin spectrum standard series was developed. K2S2O7, NaF, Al2O3 and carbon powder were used as buffers and Ge was used as internal standard, and the ratio of sample/matrix/buffer is 1 : 1 : 2. A weak sensitive line (Sn 242. 170 0 nm) was used as the analytical line. The technologies of vertical electrodes, AC arc overlap spectrograph, interception of the exposure, quantitative computer translation spectrum and background correction were used. The determination range is 100-22 350 microg x g(-1), the detection limit is 16.64 microg x g(-1), and the precision is (RSD, n = 12) 4.11%-6.46%. The accuracy of the method has been verified by determination of high content of tin in national geochemical standard samples and the results are in agreement with certified value. The method can be used for measurement directly without dilution of high content of tin in geochemical samples, and it greatly improved the detection upper limit for the determination of tin with solid emission spectroscopy and has certain practical value.

  12. The content and role of formal contracts in high-tech alliances

    NARCIS (Netherlands)

    de Jong, Gjalt; Woolthuis, Rosalinde Ja Klein

    2009-01-01

    In this study we investigate the governance structure of innovation processes in high-tech alliances, focusing on the content and role of formal contracts. The design of a formal agreement is one of the most important strategic decisions for alliance partners. Drawing upon transaction cost arguments

  13. Nanoscale high-content analysis using compositional heterogeneities of single proteoliposomes

    DEFF Research Database (Denmark)

    Mathiasen, Signe; Christensen, Sune M.; Fung, Juan José

    2014-01-01

    heterogeneities can severely skew ensemble-average proteoliposome measurements but also enable ultraminiaturized high-content screens. We took advantage of this screening capability to map the oligomerization energy of the β2-adrenergic receptor using ∼10(9)-fold less protein than conventional assays....

  14. Cultural Parallax and Content Analysis: Images of Black Women in High School History Textbooks

    Science.gov (United States)

    Woyshner, Christine; Schocker, Jessica B.

    2015-01-01

    This study investigates the representation of Black women in high school history textbooks. To examine the extent to which Black women are represented visually and to explore how they are portrayed, the authors use a mixed-methods approach that draws on analytical techniques in content analysis and from visual culture studies. Their findings…

  15. Adhesive performance of washed cottonseed meal at high solid contents and low temperatures

    Science.gov (United States)

    Water-washed cottonseed meal (WCSM) has been shown as a promising biobased wood adhesive. Recently, we prepared WSCM in a pilot scale for promoting its industrial application. In this work, we tested the adhesive strength and viscosity of the adhesive preparation with high solid contents (up to 30%...

  16. Evolution of undissolved phases in high-zinc content super-high strength aluminum alloy during ageing

    Institute of Scientific and Technical Information of China (English)

    张坤; 刘志义; 叶呈武; 许晓嫦; 郑青春

    2004-01-01

    The evolution of undissolved phases in the high-zinc content super-high strength aluminum alloy during ageing was investigated by means of SEM and EIS. The results show that undissolved phases of Cu-rich M(AlZnMgCu) exist in the silver-free alloy at solid-solution state. With increasing the ageing time, the precipitation of agehardening precipitates MgZn2 stimulates Zn atoms within the undissolved phases to diffuse into the matrix, and thus the Cu content in the M(AlZnMgCu) phase increases relatively. For the silver-bearing alloy, small addition of Ag promotes the formation of Ag-rich M(A1ZnMgCuAg) undissolved phases and deteriorates mechanical properties of the alloy. At the early stage of ageing, Ag content within the M(AlZnMgCuAg) phases greatly decreases due to rapid diffusing of Ag atoms into the matrix and the co-clustering of Ag and Mg atoms. As the ageing time prolonging, the precipitation of MgZn2 results in the decrease of Zn content in the undissolved phases, and the relative increase of Ag and Mg contents.

  17. High Water Content Material Based on Ba-Bearing Sulphoaluminate Cement

    Institute of Scientific and Technical Information of China (English)

    CHANG Jun; CHENG Xin; LU Lingchao; HUANG Shifeng; YE Zhengmao

    2005-01-01

    A new type of high water content material which is made up of two pastes is prepared, one is made from lime and gypsum, and another is based on Ba-bearing stdphoaluminate cement. It has excellent properties such as slow single paste solidifing,fast double pastes solidifing,fast coagulating and hardening, high early strength, good suspension property at high W/C ratio and low cost. Meanwhile, the properties and hydration mechanism of the material were analyzed by using XRD , DTA- TG and SEM. The hydrated products of new type of high water content material are Ba-bearing ettringite, BaSO4 , aluminum gel and C-S-H gel.

  18. The effect of High Pressure and High Temperature processing on carotenoids and chlorophylls content in some vegetables.

    Science.gov (United States)

    Sánchez, Celia; Baranda, Ana Beatriz; Martínez de Marañón, Iñigo

    2014-11-15

    The effect of High Pressure (HP) and High Pressure High Temperature (HPHT) processing on carotenoid and chlorophyll content of six vegetables was evaluated. In general, carotenoid content was not significantly influenced by HP or HPHT treatments (625 MPa; 5 min; 20, 70 and 117 °C). Regarding chlorophylls, HP treatment caused no degradation or slight increases, while HPHT processes degraded both chlorophylls. Chlorophyll b was more stable than chlorophyll a at 70 °C, but both of them were highly degraded at 117 °C. HPHT treatment at 117 °C provided products with a good retention of carotenoids and colour in the case of red vegetables. Even though the carotenoids also remained in the green vegetables, their chlorophylls and therefore their colour were so affected that milder temperatures need to be applied. As an industrial scale equipment was used, results will be useful for future industrial implementation of this technology.

  19. High School Science Teachers' Perceptions of Teaching Content-Related Reading Comprehension Instruction

    Science.gov (United States)

    Williams, Theresa

    In order to achieve academic success, students must be able to comprehend written material in content-area textbooks. However, a large number of high school students struggle to comprehend science content. Research findings have demonstrated that students make measurable gains in comprehending content-area textbooks when provided quality reading comprehension instruction. The purpose of this study was to gain an understanding of how high school science teachers perceived their responsibility to provide content-related comprehension instruction and 10 high school science teachers were interviewed for this study. Data analysis consisted of open, axial, and selective coding. The findings revealed that 8 out of the 10 participants believed that it is their responsibility to provide reading comprehension. However, the findings also revealed that the participants provided varying levels of reading comprehension instruction as an integral part of their science instruction. The potential for positive social change could be achieved by teachers and administrators. Teachers may use the findings to reflect upon their own personal feelings and beliefs about providing explicit reading comprehension. In addition to teachers' commitment to reading comprehension instruction, administrators could deliberate about professional development opportunities that might improve necessary skills, eventually leading to better comprehension skills for students and success in their education.

  20. Fast repurposing of high-resolution stereo video content for mobile use

    Science.gov (United States)

    Karaoglu, Ali; Lee, Bong Ho; Boev, Atanas; Cheong, Won-Sik; Gotchev, Atanas

    2012-06-01

    3D video content is captured and created mainly in high resolution targeting big cinema or home TV screens. For 3D mobile devices, equipped with small-size auto-stereoscopic displays, such content has to be properly repurposed, preferably in real-time. The repurposing requires not only spatial resizing but also properly maintaining the output stereo disparity, as it should deliver realistic, pleasant and harmless 3D perception. In this paper, we propose an approach to adapt the disparity range of the source video to the comfort disparity zone of the target display. To achieve this, we adapt the scale and the aspect ratio of the source video. We aim at maximizing the disparity range of the retargeted content within the comfort zone, and minimizing the letterboxing of the cropped content. The proposed algorithm consists of five stages. First, we analyse the display profile, which characterises what 3D content can be comfortably observed in the target display. Then, we perform fast disparity analysis of the input stereoscopic content. Instead of returning the dense disparity map, it returns an estimate of the disparity statistics (min, max, meanand variance) per frame. Additionally, we detect scene cuts, where sharp transitions in disparities occur. Based on the estimated input, and desired output disparity ranges, we derive the optimal cropping parameters and scale of the cropping window, which would yield the targeted disparity range and minimize the area of cropped and letterboxed content. Once the rescaling and cropping parameters are known, we perform resampling procedure using spline-based and perceptually optimized resampling (anti-aliasing) kernels, which have also a very efficient computational structure. Perceptual optimization is achieved through adjusting the cut-off frequency of the anti-aliasing filter with the throughput of the target display.

  1. Selection of hybrids and edible citrus species with a high content in the diosmin functional compound. Modulating effect of plant growth regulators on contents.

    Science.gov (United States)

    Marín, F R; Del Río, J A

    2001-07-01

    The purpose of this study is to identify species, hybrids, and cultivars of edible Citrus species with high contents of diosmin as a functional compound and also to identify the developmental progress of the fruit in which it reaches maximum levels; these findings would be useful for extraction purposes and for the modulating effect of plant growth regulators on diosmin content to increase the level of this flavone. The results obtained reveal that the highest contents of diosmin are present in immature fruits of certain varieties of citron (Buda's finger) and lemon (Meyer), whereas the contents in the edible parts of the fruits are irrelevant from a pharmacological point of view. Similarly, it is shown that it is possible to increase the content of this flavone using hormonal treatments (6-benzylaminopurine and 2,4-dichlorophenoxyacetic acid) during the early stages of fruit growth.

  2. Photoluminescence efficiency of BGaN epitaxial layers with high boron content

    Energy Technology Data Exchange (ETDEWEB)

    Jurkevičius, J.; Mickevičius, J., E-mail: juras.mickevicius@ff.vu.lt; Kadys, A.; Kolenda, M.; Tamulaitis, G.

    2016-07-01

    High-boron-content epitaxial layers of BGaN intended for lattice-matching with AlGaN in UV light emitters were grown on SiC substrate and GaN and AlN templates on sapphire. Photoluminescence (PL) of these layers was studied under quasi-steady-state conditions by varying temperature and excitation intensity. The PL spectra in the samples with different boron content and their dynamics evidence formation of boron-rich regions occupying a small fraction of the total layer volume and acting as the emission killers. The room-temperature PL efficiency of the BGaN epilayers was estimated and shown to drastically decrease at increasing boron content with no significant correlation with either the type of substrate/template or technological conditions of the layer deposition.

  3. Determination of Ge content in high concentration Ge-doped Czochralski Si single crystals by FTIR

    Institute of Scientific and Technical Information of China (English)

    JIANG Zhongwei; ZHANG Weilian; NIU Xinhuan

    2005-01-01

    SiGe single crystals with different Ge concentrations were measured by Fourier transform infrared (FTIR) spectroscopy at room temperature (RT) and 10 K. A new peak appears at the wave number of 710 cm-1 and the spectroscopy becomes clearer with an increase in Ge content. The absorption strength and wave sharp of the 710 cm-1 peak are independent of temperature. The relation of the absorption coefficient amax, the band width of half maximum (BWHM) W1/2 of the 710 cm-1 peak, and the Ge concentration is determined with the Ge content obtained by SEM-EDX. The conversion factor is k = 1.211 at 10 K. Therefore, the Ge content in high concentration Ge doped CZ-Si single crystals can be determined by FTIR.

  4. Structure and Content Analysis for Vocational High School Website in Indonesia

    Science.gov (United States)

    Subagja, H.; Abdullah, A. G.; Trisno, B.; Nandiyanto, A. B. D.

    2017-03-01

    Statistics about the condition of the school’s website in Indonesia is still difficult. This study aims to determine website quality in terms of completeness of content’s criteria of Vocational High School (VHS) in West Java, Indonesia. The method used is the content analysis and survey. Content analysis is reviewing the documents comprising the general category, while the survey is a observation process to get the facts from 272 school websites. Aspects of the structure and content of school website are including institutional information, educators and education personnel, curriculum, student, infrastructure, school achievement, and public access. The results of this study showed the average quality of the VHS website in West Java is still low. The recommendations are needed to improve the quality of the school website.

  5. Deposition of High Conductivity Low Silver Content Materials by Screen Printing

    Directory of Open Access Journals (Sweden)

    Eifion Jewell

    2015-05-01

    Full Text Available A comprehensive experimental investigation has been carried out into the role of film thickness variation and silver material formulation on printing capability in the screen printing process. A full factorial experiment was carried out where two formulations of silver materials were printed through a range of screens to a polyester substrate under a set of standard conditions. The materials represented a novel low silver content (45%–49% polymer material and traditional high silver content (65%–69% paste. The resultant prints were characterised topologically and electrically. The study shows that more cost effective use of the silver in the ink was obtained with the low silver polymer materials, but that the electrical performance was more strongly affected by the mesh being used (and hence film thickness. Thus, while optimum silver use could be obtained using materials with a lower silver content, this came with the consequence of reduced process robustness.

  6. A High Resolution Capacitive Sensing System for the Measurement of Water Content in Crude Oil

    Directory of Open Access Journals (Sweden)

    Muhammad Zubair Aslam

    2014-06-01

    Full Text Available This paper presents the design of a non-intrusive system to measure ultra-low water content in crude oil. The system is based on a capacitance to phase angle conversion method. Water content is measured with a capacitance sensor comprising two semi-cylindrical electrodes mounted on the outer side of a glass tube. The presence of water induces a capacitance change that in turn converts into a phase angle, with respect to a main oscillator. A differential sensing technique is adopted not only to ensure high immunity against temperature variation and background noise, but also to eliminate phase jitter and amplitude variation of the main oscillator that could destabilize the output. The complete capacitive sensing system was implemented in hardware and experiment results using crude oil samples demonstrated that a resolution of ±50 ppm of water content in crude oil was achieved by the proposed design.

  7. Reduction of phorbol ester content in jatropha cake using high energy gamma radiation

    Directory of Open Access Journals (Sweden)

    Runumi Gogoi

    2014-07-01

    Full Text Available In this paper, an attempt has been made to remove phorbol ester present in jatropha cake by exposing it to gamma radiation. A sensitizer was also used to accelerate the degradation of phorbol esters. The phorbol ester content in the cake was estimated by high performance liquid chromatography (HPLC. It was observed that gamma irradiation of the jatropha seed cake was effective in reducing the phorbol ester content. Originally, the phorbol ester content in the cake was found as 0.29 mg/g, which on exposure to radiation was reduced by 33.4% and 96% with radiation dose of 30 and 125 kGy respectively. The presence of a sensitizer was found to enhances the susceptibility of phorbol esters degradation by oxidative degradation on exposure to ionizing radiation.

  8. Structure of branching enzyme- and amylomaltase modified starch produced from well-defined amylose to amylopectin substrates

    DEFF Research Database (Denmark)

    Sorndecha, Waraporn; Sagnelli, Domenico; Meier, Sebastian

    2016-01-01

    Thermostable branching enzyme (BE, EC 2.4.1.18) from Rhodothermus obamensis in combination with amylomaltase (AM, EC 2.4.1.25) from Thermus thermophilus was used to modify starch structure exploring potentials to extensively increase the number of branch points in starch. Amylose is an important...

  9. Second-harmonic generation from thin films of mixtures of an aggregated chiral 4-nitroazobenzene dye and amylose acetate

    NARCIS (Netherlands)

    Schoondorp, Monique A.; Schouten, Arend Jan; Hulshof, Johannes; Schudde, Ebe P.; Feringa, Ben L.

    1994-01-01

    Second-harmonic generation (SHG) from both Langmuir-Blodgett (LB) films and solvent-cast films of mixtures of a chiral nonlinear optical (NLO) dye, an ester of palmitic acid and 4-nitro-4'-[(3R)-hydroxypyrrolidinyl]azobenzene (KMES16) and amylose acetate is investigated. Results are discussed concer

  10. Rheological characterization of solutions and thin films made from amylose-hexadecylammonium chloride inclusion complexes and polyvinyl alcohol

    Science.gov (United States)

    The rheological properties of aqueous solutions and films made from blends of polyvinyl alcohol (PVOH) and amylose-hexadecylammonium chloride inclusion complexes (Hex-Am) were investigated to better understand the polymer interactions and processing parameters. Aqueous solutions of Hex-Am displayed ...

  11. DFT Conformation and Energies of Amylose Fragments at Atomic Resolution Part I: Syn Forms of Alpha-Maltotetraose

    Science.gov (United States)

    DFT optimization studies of ninety syn '-maltotetraose (DP-4) amylose fragments have been carried out at the B3LYP/6-311++G** level of theory. The DP-4 fragments studied include V-helix, tightly bent conformations, a boat, and a 1C4 conformer. The standard hydroxymethyl rotamers (gg, gt, tg) were ...

  12. Revertants of the amylose-free (amf) potato clone 86.040 (2n=1x=12)

    NARCIS (Netherlands)

    Jacobsen, Evert; KRIJGSHELD, HT; Hermelink, J; Ponstein, A.S.; Witholt, Bernard; Feenstra, W.J.

    1990-01-01

    The amylose-free (amf) potato clone 86.040 (2n = 1x = 12), in which the enzyme granule bound starch synthase (GBSS) is affected, has been used for the induction and isolation of revertants with loosely branched amylopectin. Screening of 5500 microtubers, which were induced on stem segments of 685 ir

  13. Plant α-glucan phosphatases SEX4 and LSF2 display different affinity for amylopectin and amylose

    DEFF Research Database (Denmark)

    Wilkens, Casper; Auger, Kyle D.; Anderson, Nolan T.;

    2016-01-01

    The plant glucan phosphatases Starch EXcess 4 (SEX4) and Like Sex Four2 (LSF2) apply different starch binding mechanisms. SEX4 contains a carbohydrate binding module, and LSF2 has two surface binding sites (SBSs). We determined KDapp for amylopectin and amylose, and KD for β-cyclodextrin and vali...

  14. High-Reliability Low-Ag-Content Sn-Ag-Cu Solder Joints for Electronics Applications

    Science.gov (United States)

    Shnawah, Dhafer Abdulameer; Said, Suhana Binti Mohd; Sabri, Mohd Faizul Mohd; Badruddin, Irfan Anjum; Che, Fa Xing

    2012-09-01

    Sn-Ag-Cu (SAC) alloy is currently recognized as the standard lead-free solder alloy for packaging of interconnects in the electronics industry, and high- Ag-content SAC alloys are the most popular choice. However, this choice has been encumbered by the fragility of the solder joints that has been observed in drop testing as well as the high cost of the Ag itself. Therefore, low-Ag-content SAC alloy was considered as a solution for both issues. However, this approach may compromise the thermal-cycling performance of the solders. Therefore, to enhance the thermal-cycling reliability of low-Ag-content SAC alloys without sacrificing their drop-impact performance, alloying elements such as Mn, Ce, Ti, Bi, In, Sb, Ni, Zn, Al, Fe, and Co were selected as additions to these alloys. However, research reports related to these modified SAC alloys are limited. To address this paucity, the present study reviews the effect of these minor alloying elements on the solder joint reliability of low-Ag-content SAC alloys in terms of thermal cycling and drop impact. Addition of Mn, Ce, Bi, and Ni to low-Ag-content SAC solder effectively improves the thermal-cycling reliability of joints without sacrificing the drop-impact performance. Taking into consideration the improvement in the bulk alloy microstructure and mechanical properties, wetting properties, and growth suppression of the interface intermetallic compound (IMC) layers, addition of Ti, In, Sb, Zn, Al, Fe, and Co to low-Ag-content SAC solder has the potential to improve the thermal-cycling reliability of joints without sacrificing the drop-impact performance. Consequently, further investigations of both thermal-cycling and drop reliability of these modified solder joints must be carried out in future work.

  15. S-RHT FIXED-BED HYDROTREATING TECHNOLOGY FOR RESIDUE WITH HIGH SULFUR CONTENT

    Institute of Scientific and Technical Information of China (English)

    2001-01-01

    To meet the demands of processing residue with high sulfur content, Fushun Research Institute of Petroleum and Petrochemicals (FRIPP) successfully developed the fixed-bed residue hydrotreating technology (S-RHT), which is suitable for treating high sulfur residue to produce diesel oil with low sulfur content. the hydrotreated 350 ℃+ residue is also a good feedstock for RFCC. Based on this technology, Maoming Petrochemical Company constructed the hydrotreating unit with a capacity of 2 Mt/a to treat high sulfur residue, in which loaded FZC series catalysts were developed by FRIPP. The unit was first put into commercial operation at the end of 1999. The commercial operation showed that the catalysts have good activities and the products meet the designed specifications.

  16. Environmental factors that affect the ability of amylose to contribute to retrogradation in gels made from rice flour.

    Science.gov (United States)

    Philpot, Kim; Martin, Margrit; Butardo, Vito; Willoughby, Doug; Fitzgerald, Melissa

    2006-07-12

    Retrogradation in rice is a trait that describes the hardening of cooked rice after storage or cooling, and it has significant implications for many consumers of rice, since many people cook rice in the morning and consume it several hours later or the next day. Tools to select against retrogradation in breeding programs are yet to be described. Here, we aim to determine the effect on retrogradation of storage time and temperature and the role of starch, protein, and lipids using gels made from Koshihikari grown in either Australia or Japan. Immediately after cooking, cooling from 60 to 40 degrees C had a minimal effect on firmness, but cooling to 20 degrees C led to significantly firmer gels. Storing the gels at low temperatures did not have an additional effect on the firmness as compared with storing the gels at 20, 40, or 60 degrees C. The removal of proteins led to significantly softer gels at all storage treatments but did not affect the change in firmness on cooling. The removal of lipids increased the rate of retrogradation and the firmness of gels significantly for all treatments. Koshihikari grown in Japan retrograded much less than Koshihikari grown in Australia. The amount of amylose that could be washed from gels made from Australian flour was much greater than for gels made from Japanese flour. After storage, only low molecular weight amylose chains were released from the gel and only after rewarming them to 60 degrees C. Despite the fact that flours from both origins were 18% amylose, the amount of long amylose chains that were complexed with lipids was much greater for the Japanese rice, and the unavailability of the complexed long amylose chains explained the lack of retrogradation in the Japanese rice. Once the long chains were released from amylose-lipid complexes, the Japanese rice retrograded. Thus, the environmental factor affecting retrogradation in this variety is type or amount of lipids synthesized, and the degree of retrogradation was

  17. Effect of religious context on the content of visual hallucinations in individuals high in religiosity.

    Science.gov (United States)

    Reed, Phil; Clarke, Natasha

    2014-03-30

    This study investigated the interaction between the current environment and personality factors associated with religiosity in determining the content of false perceptions (used as a model for hallucinations). A primed word-detection task was used to investigate the effect of a 'religious' context on false perceptions in individuals scoring highly on religiosity. After a subliminal prime, participants viewed letter strings, and stated any words that they saw. The prime and the actual words could have a religious connotation or not. Participants measuring high on religiosity were more likely to report false perceptions of a religious type than participants low on religiosity. It is suggested that context affects the content of false perceptions through the activation of stored beliefs and values, which vary between individuals, offering a mechanism for the effect of context on idiosyncratic content of hallucinations in schizophrenia. The effect of context and individual differences on false-perception content in the current study provides possibilities for future work regarding the underlying nature of hallucinations and their treatment.

  18. Effect of droplet heat content distribution on humping formation in high speed GMAW

    Institute of Scientific and Technical Information of China (English)

    Ji CHEN; Chuansong WU

    2011-01-01

    The momentum of strong backward flowing melt jet and the thermal action from transferred droplets are two dominating factors affecting the formation of humping bead in high speed gas metal arc welding (GMAW).Appropriate describing the influence of the distribution mode of droplet heat content in the weld pool is essential to understand the physical mechanism of humping bead formation.Based on the experimental results,four kinds of droplet heat content distribution modes are proposed and employed to calculate the transient evolution of the temperature field and weld pool during high speed GMAW process.Through making comparison of predicted and measured weld bead dimensions,a suitable and adaptive distribution mode of droplet heat content is found,i.e.,droplet heat content is distributed in bottom layer of gouging region at the front of weld pool,and is averagely distributed in the whole layer at the rear of weld pool.The proposed mode is also validated by experimental observation of the weld pool images and measured by geometric dimensions of the weld bead.

  19. Influence of Ta Content in High Purity Niobium on Cavity Performance Preliminary Results*

    CERN Document Server

    Kneisel, P

    2004-01-01

    In a previous paper* a program designed to study the influence of the residual tantalum content on the superconducting properties of pure niobium metal for RF cavities was outlined. The main rationale for this program was based on a potential cost reduction for high purity niobium, if a less strict limit on the chemical specification for Ta content, which is not significantly affecting the RRR–value, could be tolerated for high performance cavities. Four ingots with different Ta contents have been melted and transformed into sheets. In each manufacturing step the quality of the material has been monitored by employing chemical analysis, neutron activation analysis, thermal conductivity measurements and evaluation of the mechanical properties. The niobium sheets have been scanned for defects by an eddy current device. From three of the four ingots—Ta contents 100, 600 and 1,200 wppm—two single cell cavities each of the CEBAF variety have been fabricated and a series of tests on each ...

  20. A Categorical Content Analysis of Highly Cited Literature Related to Trends and Issues in Special Education.

    Science.gov (United States)

    Arden, Sarah V; Pentimonti, Jill M; Cooray, Rochana; Jackson, Stephanie

    2017-07-01

    This investigation employs categorical content analysis processes as a mechanism to examine trends and issues in a sampling of highly cited (100+) literature in special education journals. The authors had two goals: (a) broadly identifying trends across publication type, content area, and methodology and (b) specifically identifying articles with disaggregated outcomes for students with learning disabilities (LD). Content analyses were conducted across highly cited (100+) articles published during a 20-year period (1992-2013) in a sample ( n = 3) of journals focused primarily on LD, and in one broad, cross-categorical journal recognized for its impact in the field. Results indicated trends in the article type (i.e., commentary and position papers), content (i.e., reading and behavior), and methodology (i.e., small proportions of experimental and quasi-experimental designs). Results also revealed stability in the proportion of intervention research studies when compared to previous analyses and a decline in the proportion of those that disaggregated data specifically for students with LD.

  1. Optimizing Cationic and Neutral Lipids for Efficient Gene Delivery at High Serum Content

    Science.gov (United States)

    Majzoub, Ramsey N.; Hwu, Yeu-kuang; Liang, Keng S.; Leal, Cecília; Safinya, Cyrus R.

    2014-01-01

    Background Cationic liposome (CL)-DNA complexes are promising gene delivery vectors with potential applications in gene therapy. A key challenge in creating CL-DNA complexes for applications is that their transfection efficiency (TE) is adversely affected by serum. In particular, little is known about the effects of high serum contents on TE even though this may provide design guidelines for applications in vivo. Methods We prepared CL-DNA complexes in which we varied the neutral lipid (DOPC, glycerol-monooleate (GMO), cholesterol), the headgroup charge and chemical structure of the cationic lipid, and the ratio of neutral to cationic lipid; we then measured the TE of these complexes as a function of serum content and assessed their cytotoxicity. We tested selected formulations in two human cancer cell lines (M21/melanoma and PC-3/prostate cancer). Results In the absence of serum, all CL-DNA complexes of custom-synthesized multivalent lipids show high TE. Certain combinations of multivalent lipids and neutral lipids, such as MVL5(5+)/GMO-DNA complexes or complexes based on the dendritic-headgroup lipid TMVLG3(8+) exhibited high TE both in the absence and presence of serum. Although their TE still dropped to a small extent in the presence of serum, it reached or surpassed that of benchmark commercial transfection reagents, in particular at high serum content. Conclusions Two-component vectors (one multivalent cationic lipid and one neutral lipid) can rival or surpass benchmark reagents at low and high serum contents (up to 50%, v/v). We suggest guidelines for optimizing the serum resistance of CL-DNA complexes based on a given cationic lipid. PMID:24753287

  2. Active Learning Strategies for Phenotypic Profiling of High-Content Screens.

    Science.gov (United States)

    Smith, Kevin; Horvath, Peter

    2014-06-01

    High-content screening is a powerful method to discover new drugs and carry out basic biological research. Increasingly, high-content screens have come to rely on supervised machine learning (SML) to perform automatic phenotypic classification as an essential step of the analysis. However, this comes at a cost, namely, the labeled examples required to train the predictive model. Classification performance increases with the number of labeled examples, and because labeling examples demands time from an expert, the training process represents a significant time investment. Active learning strategies attempt to overcome this bottleneck by presenting the most relevant examples to the annotator, thereby achieving high accuracy while minimizing the cost of obtaining labeled data. In this article, we investigate the impact of active learning on single-cell-based phenotype recognition, using data from three large-scale RNA interference high-content screens representing diverse phenotypic profiling problems. We consider several combinations of active learning strategies and popular SML methods. Our results show that active learning significantly reduces the time cost and can be used to reveal the same phenotypic targets identified using SML. We also identify combinations of active learning strategies and SML methods which perform better than others on the phenotypic profiling problems we studied.

  3. Variations in pore characteristics in high volatile bituminous coals: Implications for coal bed gas content

    Science.gov (United States)

    Mastalerz, Maria; Drobniak, A.; Strapoc, D.; Solano-Acosta, W.; Rupp, J.

    2008-01-01

    The Seelyville Coal Member of the Linton Formation (Pennsylvanian) in Indiana was studied to: 1) understand variations in pore characteristics within a coal seam at a single location and compare these variations with changes occurring between the same coal at different locations, 2) elaborate on the influence of mineral-matter and maceral composition on mesopore and micropore characteristics, and 3) discuss implications of these variations for coal bed gas content. The coal is high volatile bituminous rank with R0 ranging from 0.57% to 0.60%. BET specific surface areas (determined by nitrogen adsorption) of the coals samples studied range from 1.8 to 22.9??m2/g, BJH adsorption mesopore volumes from 0.0041 to 0.0339??cm3/g, and micropore volumes (determined by carbon dioxide adsorption) from 0.0315 to 0.0540??cm3/g. The coals that had the largest specific surface areas and largest mesopore volumes occur at the shallowest depths, whereas the smallest values for these two parameters occur in the deepest coals. Micropore volumes, in contrast, are not depth-dependent. In the coal samples examined for this study, mineral-matter content influenced both specific surface area as well as mesopore and micropore volumes. It is especially clear in the case of micropores, where an increase in mineral-matter content parallels the decrease of micropore volume of the coal. No obvious relationships were observed between the total vitrinite content and pore characteristics but, after splitting vitrinite into individual macerals, we see that collotelinite influences both meso- and micropore volume positively, whereas collodetrinite contributes to the reduction of mesopore and micropore volumes. There are large variations in gas content within a single coal at a single location. Because of this variability, the entire thickness of the coal must be desorbed in order to determine gas content reliably and to accurately calculate the level of gas saturation. ?? 2008 Elsevier B.V. All

  4. Non-isothermal Crystallization Kinetics of Spinels in Vanadium Slag with High CaO Content

    Science.gov (United States)

    Zhou, Wang; Xie, Bing; Tan, Wen-Feng; Diao, Jiang; Zhang, Xie; Li, Hong-Yi

    2016-09-01

    This paper investigated the non-isothermal crystallization kinetics of the spinel crystals in vanadium slags containing high CaO content. Experiments were performed in combination with theoretical calculation to address this issue, and statistical analyses based on the Crystal Size Distribution theory. The results indicate that low cooling rate and high CaO content benefit the growth of spinel crystals. The growth mechanism is revealed to be controlled by interface reactions and diffusion at the cooling rates of 5 K/min and 15 K/min, respectively. However, at higher temperatures (>1673 K), the growth of spinel crystals is controlled by nucleation. While the temperature is decreased to 1523 K at the cooling rate of 5 K/min, the mean diameter of spinel crystals could reach 36.44 μm. Experimental results combining with theoretical reveal that low cooling rate benefits spinels growth, especially for the interval of 1523 K-1200 K.

  5. Nonisothermal Thermogravimetric Analysis of Thai Lignite with High CaO Content

    Directory of Open Access Journals (Sweden)

    Pakamon Pintana

    2013-01-01

    Full Text Available Thermal behaviors and combustion kinetics of Thai lignite with different SO3-free CaO contents were investigated. Nonisothermal thermogravimetric method was carried out under oxygen environment at heating rates of 10, 30, and 50°C min−1 from ambient up to 1300°C. Flynn-Wall-Ozawa (FWO and Kissinger-Akahira-Sunose (KAS methods were adopted to estimate the apparent activation energy (E for the thermal decomposition of these coals. Different thermal degradation behaviors were observed in lignites with low (14% and high (42% CaO content. Activation energy of the lignite combustion was found to vary with the conversion fraction. In comparison with the KAS method, higher E values were obtained by the FWO method for all conversions considered. High CaO lignite was observed to have higher activation energy than the low CaO coal.

  6. Aquatic heterotrophic bacteria have highly flexible phosphorus content and biomass stoichiometry.

    Science.gov (United States)

    Godwin, Casey M; Cotner, James B

    2015-10-01

    Bacteria are central to the cycling of carbon (C), nitrogen (N) and phosphorus (P) in every ecosystem, yet our understanding of how tightly these cycles are coupled to bacterial biomass composition is based upon data from only a few species. Bacteria are commonly assumed to have high P content, low biomass C:P and N:P ratios, and inflexible stoichiometry. Here, we show that bacterial assemblages from lakes exhibit unprecedented flexibility in their P content (3% to less than 0.01% of dry mass) and stoichiometry (C:N:P of 28: 7: 1 to more than 8500: 1200: 1). The flexibility in C:P and N:P stoichiometry was greater than any species or assemblage, including terrestrial and aquatic autotrophs, and suggests a highly dynamic role for bacteria in coupling multiple element cycles.

  7. Effect of spinel content on the properties of phosphoric acid bonded high alumina castables

    Institute of Scientific and Technical Information of China (English)

    Zichun Yang; Hongwei Duan; Lin Li; Shuqin Li; Wen Ni

    2003-01-01

    In order to study the effect of fused spinel on the properties of phosphoric acid bonded high alumina castables, samples with different contents of fused spinel were prepared. The results show that when the contents of the fused spinel are between 8% and 16% (mass fraction), the castables have good properties. The castables overcome the shortages of the phosphoric acid bonded high alumina castables with bauxite cement as a hardening promoter. The experiments demonstrate that most of the service properties of the castables with fused spinel are better than those of the normal phosphoric acid bonded castables which use bauxite cement as a hardening promoter. The examination of the materials indicates that free MgO inclusions in the spinel powder can promote the hardening of the castables.

  8. Electrodeposition of Sm–Co film with high Sm content from aqueous solution

    Energy Technology Data Exchange (ETDEWEB)

    Long, Xiong-fei; Guo, Guang-hua, E-mail: guogh@mail.csu.edu.cn; Li, Xin-hua; Xia, Qing-lin; Zhang, Jin-fang

    2013-12-02

    Sm–Co films with high Sm content were electrodeposited by potentiostat technique from the aqueous solution containing glycine as a complexing agent. The Cyclic Voltammetry measurements showed that the glycine plays a crucial role in the electrodeposition of Sm–Co films. The forming of stable complex [Co{sup II}Sm{sup III}(Gly{sup −}){sub 2}(HGly{sup ±})]{sup 3+} facilitated the codeposition of Sm with Co at relatively low potential, which made it possible to fabricate the Sm–Co films with high Sm content. The Sm–Co film with 43 at.% Sm had been obtained. X-ray diffraction showed that the as-deposited Sm–Co films were amorphous. After annealing at 600 °C for 2 h in Ar atmosphere, the films became crystalline and the permanent Sm{sub 2}Co{sub 17} phase was formed, which significantly enhanced the coercivity of the films. - Highlights: • The Sm–Co film with high Sm content is electrodeposited from aqueous solutions. • The addition of glycine facilitates the codeposition of Sm with Co at relatively low potential. • The Sm{sub 2}Co{sub 17} phase is formed in the annealed Sm–Co film.

  9. High-Content Microscopy Analysis of Subcellular Structures: Assay Development and Application to Focal Adhesion Quantification.

    Science.gov (United States)

    Kroll, Torsten; Schmidt, David; Schwanitz, Georg; Ahmad, Mubashir; Hamann, Jana; Schlosser, Corinne; Lin, Yu-Chieh; Böhm, Konrad J; Tuckermann, Jan; Ploubidou, Aspasia

    2016-07-01

    High-content analysis (HCA) converts raw light microscopy images to quantitative data through the automated extraction, multiparametric analysis, and classification of the relevant information content. Combined with automated high-throughput image acquisition, HCA applied to the screening of chemicals or RNAi-reagents is termed high-content screening (HCS). Its power in quantifying cell phenotypes makes HCA applicable also to routine microscopy. However, developing effective HCA and bioinformatic analysis pipelines for acquisition of biologically meaningful data in HCS is challenging. Here, the step-by-step development of an HCA assay protocol and an HCS bioinformatics analysis pipeline are described. The protocol's power is demonstrated by application to focal adhesion (FA) detection, quantitative analysis of multiple FA features, and functional annotation of signaling pathways regulating FA size, using primary data of a published RNAi screen. The assay and the underlying strategy are aimed at researchers performing microscopy-based quantitative analysis of subcellular features, on a small scale or in large HCS experiments. © 2016 by John Wiley & Sons, Inc.

  10. Functional genomic and high-content screening for target discovery and deconvolution

    Science.gov (United States)

    Heynen-Genel, Susanne; Pache, Lars; Chanda, Sumit K

    2014-01-01

    Introduction Functional genomic screens apply knowledge gained from the sequencing of the human genome toward rapid methods of identifying genes involved in cellular function based on a specific phenotype. This approach has been made possible through the use of advances in both molecular biology and automation. The utility of this approach has been further enhanced through the application of image-based high content screening, an automated microscopy and quantitative image analysis platform. These approaches can significantly enhance acquisition of novel targets for drug discovery. Areas covered Both the utility and potential issues associated with functional genomic screening approaches are discussed along with examples that illustrate both. The considerations for high content screening applied to functional genomics are also presented. Expert opinion Functional genomic and high content screening are extremely useful in the identification of new drug targets. However, the technical, experimental, and computational parameters have an enormous influence on the results. Thus, although new targets are identified, caution should be applied toward interpretation of screening data in isolation. Genomic screens should be viewed as an integral component of a target identification campaign that requires both the acquisition of orthogonal data, as well as a rigorous validation strategy. PMID:22860749

  11. Effects of sorghum [Sorghum bicolor (L.) Moench] crude extracts on starch digestibility, Estimated Glycemic Index (EGI), and Resistant Starch (Rs) contents of porridges.

    Science.gov (United States)

    Lemlioglu-Austin, Dilek; Turner, Nancy D; McDonough, Cassandra M; Rooney, Lloyd W

    2012-09-17

    Bran extracts (70% aqueous acetone) of specialty sorghum varieties (tannin, black, and black with tannin) were used to investigate the effects of sorghum phenolic compounds on starch digestibility, Estimated Glycemic Index (EGI), and Resistant Starch (RS) of porridges made with normal corn starch, enzyme resistant high amylose corn starch, and ground whole sorghum flours. Porridges were cooked with bran extracts in a Rapid Visco-analyser (RVA). The cooking trials indicated that bran extracts of phenolic-rich sorghum varieties significantly reduced EGI, and increased RS contents of porridges. Thus, there could be potential health benefits associated with the incorporation of phenolic-rich sorghum bran extracts into foods to slow starch digestion and increase RS content.

  12. Effects of Sorghum [Sorghum bicolor (L. Moench] Crude Extracts on Starch Digestibility, Estimated Glycemic Index (EGI, and Resistant Starch (RS Contents of Porridges

    Directory of Open Access Journals (Sweden)

    Dilek Lemlioglu-Austin

    2012-09-01

    Full Text Available Bran extracts (70% aqueous acetone of specialty sorghum varieties (tannin, black, and black with tannin were used to investigate the effects of sorghum phenolic compounds on starch digestibility, Estimated Glycemic Index (EGI, and Resistant Starch (RS of porridges made with normal corn starch, enzyme resistant high amylose corn starch, and ground whole sorghum flours. Porridges were cooked with bran extracts in a Rapid Visco-analyser (RVA. The cooking trials indicated that bran extracts of phenolic-rich sorghum varieties significantly reduced EGI, and increased RS contents of porridges. Thus, there could be potential health benefits associated with the incorporation of phenolic-rich sorghum bran extracts into foods to slow starch digestion and increase RS content.

  13. New formulations of sunflower based bio-lubricants with high oleic acid content – VOSOLUB project

    Directory of Open Access Journals (Sweden)

    Leao J. D.

    2016-09-01

    Full Text Available VOSOLUB project is a demonstration project supported by Executive Agency for Small and Medium-sized Enterprises (EASME that aims at testing under real operating conditions new formulations of sunflower-based biolubricants with high oleic acid content. These biolubricant formulations (including hydraulic fluids, greases, and neat oil metal-working fluids will be tested in three European demonstrating sites. Their technical performance will be evaluated and compared to corresponding mineral lubricants ones. In order to cover the demand for the sunflower base oil, a European SMEs network will be established to ensure the supply of the base at a competitive market price. Results presented concerns the base oil quality confirmed to be in accordance with the specification required, in particular on Free Fatty acid content, Phosphorus content, rancimat induction time and oleic acid content (ITERG. The oil characteristics specific for lubricant application analyzed by BfB Oil Research under normalized methods, match with lubricant specifications requirement such as viscosity, cold & hot properties, surface properties, anti-oxidant properties and thermal stability, anti-wear and EP properties, anti-corrosion properties Performance of the new biolubricant have been assessed by formulators and TEKNIKER First results on the use of new lubricant on real condition for rail Grease (produced by RS CLARE and tested with Sheffield Supertram, Hydraulic oil (produced by BRUGAROLAS and cutting oil (produced by MOTUL TECH and tested with innovative machining, turning are described.

  14. Analysis of the origins of content non-uniformity in high-shear wet granulation.

    Science.gov (United States)

    Oka, Sarang; Smrčka, David; Kataria, Anjali; Emady, Heather; Muzzio, Fernando; Štěpánek, František; Ramachandran, Rohit

    2017-08-07

    In this study, the origins of granule content non-uniformity in the high-shear wet granulation of a model two-component pharmaceutical blend were investigated. Using acetaminophen as the active pharmaceutical ingredient (API) and microcrystalline cellulose as the excipient, the distribution of the API across the granule size classes was measured for a range of conditions that differed in the duration of the initial dry mixing stage, the overall composition of the blend and the wet massing time. The coarse granule fractions were found to be systematically sub-potent, while the fines were enriched in the API. The extent of content non-uniformity was found to be dependent on two factors - powder segregation during dry mixing and redistribution of the API between the granule size fractions during the wet massing phase. The latter was demonstrated in an experiment where the excipient was pre-granulated, the API was added later and wet massed. The content non-uniformity in this case was comparable to that obtained when both components were present in the granulator from the beginning. With increasing wet massing time, the extent of content non-uniformity decreased, indicating that longer wet massing times might be a solution for systems with a natural tendency for component segregation. Copyright © 2017 Elsevier B.V. All rights reserved.

  15. Preparation of chitosan oligomers COS and their effect on the retrogradation of intermediate amylose rice starch.

    Science.gov (United States)

    Wu, Yue; Lin, Qin Lu; Chen, Zheng Xing; Wu, Wei; Xiao, Hua Xi

    2012-12-01

    Chitosan oligomers (COS) were obtained by enzymatic hydrolysis and H2O2 oxidative treatment, and then separated into different fractions using ultra-filtration membranes. Each COSM fraction prepared using enzymatic hydrolysis retained its structure, especially the reduced end residue (-NH2 group), and had a peak for molecular weight. On the other hand, each COSH fraction prepared by oxidative treatment had partly damaged -NH2 groups and two peaks for molecular weight. These results indicate that the same COS fractions prepared by the two methods differ in their amino groups and in their molecular weights, though they can both pass through the same size ultra-filtration membrane. The effect of COS on the retrogradation of intermediate amylose rice starch (IA-RS) was also investigated. The 5 k COS determined its anti-retrogradation capability. All COSH fractions from oxidative treatment had no effect on the retrogradation.

  16. Nanocomplexation of thrombin with cationic amylose derivative for improved stability and hemostatic efficacy

    Directory of Open Access Journals (Sweden)

    Zhuang B

    2015-01-01

    Full Text Available Baoxiong Zhuang,1,* Zhihua Li,1,* Jiadong Pang,2,* Wenbin Li,1 Pinbo Huang,1 Jie Wang,1 Yu Zhou,1 Qing Lin,1 Quanbo Zhou,1 Xiao Ye,1 Huilin Ye,1 Yimin Liu,1 Li-Ming Zhang,2 Rufu Chen1 1Department of Hepato-Pancreato-Billiary Surgery, Department of Medical Oncology, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, Guangzhou, People’s Republic of China; 2DSAPM Lab and PCFM Lab, Institute of Polymer Science, Department of Polymer and Materials Science, School of Chemistry and Chemical Engineering, Sun Yat-sen University, Guangzhou, People’s Republic of China *Authors share co-first authorship Abstract: As a topical hemostatic agent, thrombin has wide application for many surgical treatments. However, native thrombin always suffers from its physical and chemical instabilities. In this work, a nanocomplexation strategy was developed for modifying the stability and hemostatic efficacy of thrombin, in which a water-soluble cationic amylose derivative containing poly(l-lysine dendrons was prepared by a click reaction and then used to complex thrombin in an aqueous system. For resultant thrombin nanocomplexes, their morphology and particle size distribution were investigated. Their stabilities were studied in terms of activity retention percentages under different storage time, pH values, and illumination time. In addition, their ability to achieve in vitro fibrinogen and blood coagulation were evaluated. Via a rat hepatic hemorrhage model and a rat iliac artery hemorrhage model, these thrombin nanocomplexes were confirmed to have good tissue biocompatibility and in vivo hemostatic effectiveness. Keywords: thrombin, nanoparticles, amylose derivative, complexation, stability, hemostatic activity

  17. Predicting In Vivo Anti-Hepatofibrotic Drug Efficacy Based on In Vitro High-Content Analysis

    OpenAIRE

    2011-01-01

    BACKGROUND/AIMS: Many anti-fibrotic drugs with high in vitro efficacies fail to produce significant effects in vivo. The aim of this work is to use a statistical approach to design a numerical predictor that correlates better with in vivo outcomes. METHODS: High-content analysis (HCA) was performed with 49 drugs on hepatic stellate cells (HSCs) LX-2 stained with 10 fibrotic markers. ~0.3 billion feature values from all cells in >150,000 images were quantified to reflect the drug effects. A sy...

  18. High-throughput analysis of total nitrogen content that replaces the classic Kjeldahl method.

    Science.gov (United States)

    Yasuhara, T; Nokihara, K

    2001-10-01

    A high-throughput method for determination of total nitrogen content has been developed. The method involves decomposition of samples, followed by trapping and quantitative colorimetric determination of the resulting ammonia. The present method is rapid, facile, and economical. Thus, it can replace the classic Kjeldahl method through its higher efficiency for determining multiple samples. Compared to the classic method, the present method is economical and environmentally friendly. Based on the present method, a novel reactor was constructed to realize routine high-throughput analyses of multiple samples such as those found for pharmaceutical materials, foods, and/or excrements.

  19. Electrical resistance stability of high content carbon fiber reinforced cement composite

    Institute of Scientific and Technical Information of China (English)

    YANG Zai-fu; TANG Zu-quan; LI Zhuo-qiu; QIAN Jue-shi

    2005-01-01

    The influences of curing time, the content of free evaporable water in cement paste, environmental temperature, and alternative heating and cooling on the electrical resistance of high content carbon fiber reinforced cement (CFRC) paste are studied by experiments with specimens of Portland cement 42.5 with 10 mm PAN-based carbon fiber and methylcellulose. Experimental results indicate that the electrical resistance of CFRC increases relatively by 24% within a hydration time of 90 d and almost keeps constant after 14 d, changes hardly with the mass loss of free evaporable water in the concrete dried at 50℃C, increases relatively by 4% when ambient temperature decreases from 15℃ to-20℃, and decreases relatively by 13% with temperature increasing by 88℃. It is suggested that the electric resistance of the CFRC is stable, which is testified by the stable power output obtained by electrifying the CFRC slab with a given voltage. This implies that such kind of high content carbon fiber reinforced cement composite is potentially a desirable electrothermal material for airfield runways and road surfaces deicing.

  20. Effect of skin care with an emollient containing a high water content on mild uremic pruritus.

    Science.gov (United States)

    Okada, Kazuyoshi; Matsumoto, Koichi

    2004-10-01

    Skin care is very important for preventing uremic pruritus. However, mild uremic pruritus has usually been treated with antihistamine and urea-containing ointments. We therefore examined the effects of an aqueous gel with higher water content. Twenty hemodialysis patients with mild pruritus who were not being treated with any emollient were divided into two groups of 10 each. Patients in one group were treated with an aqueous gel containing 80% water. This emollient was applied twice daily for 2 weeks. No emollient was applied for the next 2 weeks. The other group of patients were not treated with any emollient for the 4 weeks. Visual analog scale scores for itching in the experimental group at week 2 were significantly decreased compared with that at week 0 (3.5 +/- 0.3 vs 0.6 +/- 0.2, P emollient was stopped. There were no significant changes in the control group during the study. It is concluded that the aqueous gel with high water content reduced itching and improved xerosis in patients with mild uremic pruritus. It is reasonable that skin care with an emollient containing a high water content is first started for hemodialysis patients with xerosis, even if they do not feel itching.

  1. Pulsed Nd:YAG laser cladding of high silicon content coating on low silicon steel

    Institute of Scientific and Technical Information of China (English)

    Danyang Dong; Changsheng Liu; Bin Zhang; Jun Miao

    2007-01-01

    A pulsed Nd:YAG (yttrium aluminum garnet) laser-based technique was employed to clad low silicon steel with preplaced Si and Fe mixed powders for high Si content. The surface morphology, microstructural evolution, phase composition, and Si distribution,within the obtained cladding coatings, were characterized by optical microscopy (OM), field emission scanning electron microscopy (FE-SEM), with associated energy dispersive spectroscopy (EDS), transmission electron microscopy (TEM), and X-ray diffraction (XRD). The microhardness was also measured along the depth direction of the specimens. A crack- and pore-free cladding coating through excellent metallurgical bonding with the substrate was successfully prepared on low silicon steel by means of optimized single-track and multi-track laser cladding. The phases of the coating are α-Fe, γ-Fe, and FeSi. The high microhardness of the lasercladding zone is considered as an increase in Si content and as the refined microstructure produced by the laser treatment. The Si contents of the cladding coatings were about 5.8wt% in the single-track cladding and 6.5wt% in the multi-track cladding, respectively.

  2. Utilization of potato starch processing wastes to produce animal feed with high lysine content.

    Science.gov (United States)

    Li, Ying; Liu, Bingnan; Song, Jinzhu; Jiang, Cheng; Yang, Qian

    2015-02-01

    This work aims to utilize wastes from the potato starch industry to produce single-cell protein (SCP) with high lysine content as animal feed. In this work, S-(2-aminoethyl)-L-cysteine hydrochloride-resistant Bacillus pumilus E1 was used to produce SCP with high lysine content, whereas Aspergillus niger was used to degrade cellulose biomass and Candida utilis was used to improve the smell and palatability of the feed. An orthogonal design was used to optimize the process of fermentation for maximal lysine content. The optimum fermentation conditions were as follows: temperature of 40°C, substrate concentration of 3%, and natural pH of about 7.0. For unsterilized potato starch wastes, the microbial communities in the fermentation process were determined by terminal restriction fragment length polymorphism analysis of bacterial 16S rRNA genes. Results showed that the dominant population was Bacillus sp. The protein quality as well as the amino acid profile of the final product was found to be significantly higher compared with the untreated waste product at day 0. Additionally, acute toxicity test showed that the SCP product was non-toxic, indicating that it can be used for commercial processing.

  3. High Water Contents in the Siberian Cratonic Mantle: An FTIR Study of Udachnaya Peridotite Xenoliths

    Science.gov (United States)

    Doucet, Luc S.; Peslier, Anne H.; Ionov, Dimitri A.; Brandon, Alan D.; Golovin, Alexander V.; Ashchepkov, Igor V.

    2013-01-01

    Water is believed to be a key factor controlling the long-term stability of cratonic lithosphere, but mechanisms responsible for the water content distribution in the mantle remain poorly constrained. Water contents were obtained by FTIR in olivine, pyroxene and garnet for 20 well-characterized peridotite xenoliths from the Udachnaya kimberlite (central Siberian craton) and equilibrated at 2-7 GPa. Water contents in minerals do not appear to be related to interaction with the host kimberlite. Diffusion modeling indicates that the core of olivines preserved their original water contents. The Udachnaya peridotites show a broad range of water contents in olivine (6.5 +/- 1.1 to 323 +- 65 ppm H2O (2 sigma)), and garnet (0 - 23 +/- 6 ppm H2O). The water contents of olivine and garnet are positively correlated with modal clinopyroxene, garnet and FeO in olivine. Water-rich garnets are also rich in middle rare earth elements. This is interpreted as the result of interaction between residual peridotites and water rich-melts, consistent with modal and cryptic metasomatism evidenced in the Siberian cratonic mantle. The most water-rich Udachnaya minerals contain 2 to 3 times more water than those from the Kaapvaal craton, the only craton with an intact mantle root for which water data is available. The highest water contents in olivine and orthopyroxene in this study (>= 300 ppm) are found at the bottom of the lithosphere (> 6.5 GPa). This is in contrast with the Kaapvaal craton where the olivines of peridotites equilibrated at > 6.4 GPa have 6 GPa is lower or similar (8.4× 10(exp 16) to 8.0× 10(exp 18) Pa./s) to that of the asthenosphere (<= 3.7x10(exp 18) Pa./s ). Such lithologies would not be able to resist delamination by the convecting asthenosphere. However, seismology studies as well as the high equilibration pressures of our samples indicate that the Udachnaya cratonic lithosphere is 220-250 km thick. Consequently, the water-rich peridotites are likely not

  4. Recent advances in quantitative high throughput and high content data analysis.

    Science.gov (United States)

    Moutsatsos, Ioannis K; Parker, Christian N

    2016-01-01

    High throughput screening has become a basic technique with which to explore biological systems. Advances in technology, including increased screening capacity, as well as methods that generate multiparametric readouts, are driving the need for improvements in the analysis of data sets derived from such screens. This article covers the recent advances in the analysis of high throughput screening data sets from arrayed samples, as well as the recent advances in the analysis of cell-by-cell data sets derived from image or flow cytometry application. Screening multiple genomic reagents targeting any given gene creates additional challenges and so methods that prioritize individual gene targets have been developed. The article reviews many of the open source data analysis methods that are now available and which are helping to define a consensus on the best practices to use when analyzing screening data. As data sets become larger, and more complex, the need for easily accessible data analysis tools will continue to grow. The presentation of such complex data sets, to facilitate quality control monitoring and interpretation of the results will require the development of novel visualizations. In addition, advanced statistical and machine learning algorithms that can help identify patterns, correlations and the best features in massive data sets will be required. The ease of use for these tools will be important, as they will need to be used iteratively by laboratory scientists to improve the outcomes of complex analyses.

  5. Iodine content of infant formulas and iodine intake of premature babies: high risk of iodine deficiency.

    Science.gov (United States)

    Ares, S; Quero, J; Durán, S; Presas, M J; Herruzo, R; Morreale de Escobar, G

    1994-11-01

    As part of a study of thyroid function in premature babies, the iodine content of their mothers' breast milk, that of 32 formulas from different brands used in Spain, and that of 127 formulas used in other countries was determined. Breast milk contained more iodine--mean (SEM) 10 (1) microgram/dl--than most of the formulas, especially those for premature babies. Iodine intakes were therefore below the recommended daily amount (RDA) for newborns: babies of 27-30 weeks' gestational age took 3.1 (1.1) micrograms/day at 5 days of age and 29.8 (2.7) micrograms by 2 months of age. This problem is not exclusive to Spanish premature babies as the iodine content of many of the formulas on sale in other countries was also inadequate. It is concluded that preterm infants who are formula fed are at high risk of iodine deficiency.

  6. Data and prediction of water content of high pressure nitrogen, methane and natural gas

    DEFF Research Database (Denmark)

    Folas, Georgios; Froyna, E.W.; Lovland, J.;

    2007-01-01

    New data for the equilibrium water content of nitrogen, methane and one natural gas mixture are presented. The new binary data and existing binary sets were compared to calculated values of dew point temperature using both the CPA (Cubic-Plus-Association) EoS and the GERG-water EoS. CPA is purely...... predictive (i.e. all binary interaction parameters are set equal to 0), while GERG-water uses a temperature dependent interaction parameter fitted to published data. The GERG-water model is proposed as an ISO standard for determining the water content of natural gas. The data sets for nitrogen cover...... they have large scatter. The data sets that have been measured at low pressures extrapolate well towards the ideal equilibrium values. The two models show similar results, but differ at high pressure and/or temperature. CPA is shown to extrapolate well for methane-water to 1000 bar and 573 K, and our...

  7. Development of High Strength Steel Designed for Carbonitriding with High Nitrogen Content to Be Used for Automatic Transmission Gears

    Institute of Scientific and Technical Information of China (English)

    Youichi Watanabe

    2004-01-01

    To downsize and lighten automatic transmission components, the gears installed must be strengthened in terms of pitting endurance and/or wear resistance. The most important metallurgical factor affecting fractures is well known to be resistance to softening when steel is tempered at approximately 573 K. Carbonitriding with a high anount of nitrogen is a very effective production technique because nitrogen increases the resistance during tempering. However, structural anomalies begin to appear in the surface layer when the nitrogen content exceeds 0.6 mass% in the chromium steel generally used. To address this, we have developed new high-strength chromium steel with an optimized chemical composition that effectively inhibits anomalies even when carbonitriding with a nitrogen content of more than 0.6 mass%.We performed a drivetrain durability test on an automatic transmission component designed to have excellent contact fatigue strength and a tooth root bending impact and fatigue strength. We found that the developed steel that was carbonitrided with a content of about 0.9 mass%, and then shot peened hard, has a pitting life of roughly 4.5 times that of conventionally manufactured steel.

  8. High N-content a-C:N films elaborated by femtosecond PLD with plasma assistance

    Energy Technology Data Exchange (ETDEWEB)

    Maddi, C. [Université de Lyon, F-69003, Lyon, France, Université de Saint-Étienne, Laboratoire Hubert Curien (UMR 5516 CNRS) , 42000 Saint-Étienne (France); Donnet, C., E-mail: Christophe.Donnet@univ-st-etienne.fr [Université de Lyon, F-69003, Lyon, France, Université de Saint-Étienne, Laboratoire Hubert Curien (UMR 5516 CNRS) , 42000 Saint-Étienne (France); Loir, A.-S.; Tite, T. [Université de Lyon, F-69003, Lyon, France, Université de Saint-Étienne, Laboratoire Hubert Curien (UMR 5516 CNRS) , 42000 Saint-Étienne (France); Barnier, V. [Laboratoire Georges Friedel, Ecole Nationale Supérieure des Mines, 42023 Saint-Etienne (France); Rojas, T.C.; Sanchez-Lopez, J.C. [Instituto de Ciencia de Materiales de Sevilla (CSIC-US) , Avda. Américo Vespucio 49, 41092 Sevilla (Spain); Wolski, K. [Laboratoire Georges Friedel, Ecole Nationale Supérieure des Mines, 42023 Saint-Etienne (France); Garrelie, F. [Université de Lyon, F-69003, Lyon, France, Université de Saint-Étienne, Laboratoire Hubert Curien (UMR 5516 CNRS) , 42000 Saint-Étienne (France)

    2015-03-30

    Graphical abstract: - Highlights: • Nitrogen doped amorphous carbon films were deposited by DC reactive plasma femtosecond (fs) -PLD and conventional fs-PLD. • High nitrogen content in plasma assisted films. • More ordered sp2 rich graphitic clusters both in terms of structural and topological order. • Correlation length La of the clusters increases with nitrogen incorporation. • Formation of CN bonds at the expense of CC bonds with N content. • At the highest nitrogen concentration, terminal C≡N groups are incorporated in the film. • Correlation between film composition and plasma process. - Abstract: Amorphous carbon nitride (a-C:N) thin films are a interesting class of carbon-based electrode materials. Therefore, synthesis and characterization of these materials have found lot of interest in environmental analytical microsystems. Herein, we report the nitrogen-doped amorphous carbon thin film elaboration by femtosecond pulsed laser deposition (fs-PLD) both with and without a plasma assistance. The chemical composition and atomic bonding configuration of the films were investigated by multi-wavelength (MW) Raman spectroscopy, X-ray photoelectron spectroscopy (XPS) and electron energy-loss spectroscopy (EELS). The highest nitrogen content, 28 at.%, was obtained with plasma assistance. The I(D)/I(G) ratio and the G peak position increased as a function of nitrogen concentration, whereas the dispersion and full width at half maximum (FWHM) of G peak decreased. This indicates more ordered graphitic like structures in the films both in terms of topological and structural, depending on the nitrogen content. EELS investigations were correlated with MW Raman results. The interpretation of XPS spectra of carbon nitride films remains a challenge. Plasma assisted PLD in the femtosecond regime led to a significant high nitrogen concentration, which is highlighted on the basis of collisional processes in the carbon plasma plume interacting with the nitrogen

  9. Microspheres with an ultra high holmium content for brachytherapy of malignancies

    Energy Technology Data Exchange (ETDEWEB)

    Lira, Raphael A.; Myamoto, Douglas M.; Souza, Jaime R.; Nascimento, Nanci; Azevedo, Mariangela de Burgos M. de [Instituto de Pesquisas Energeticas e Nucleares (IPEN/CNEN-SP), Sao Paulo, SP (Brazil). Centro de Biotecnologia; Osso Junior, Joao A. [Instituto de Pesquisas Energeticas e Nucleares (IPEN/CNEN-SP), Sao Paulo, SP (Brazil). Centro de Radiofarmacia; Martinelli, Jose R. [Instituto de Pesquisas Energeticas e Nucleares (IPEN/CNEN-SP), Sao Paulo, SP (Brazil). Centro de Ciencias e Tecnologia de Materiais

    2011-07-01

    The overall objective of this work is to develop biodegradable microspheres intended for internal radiation therapy which provides an improved treatment for hepatic carcinomas. The most studied brachytherapy system employing microspheres made of holmium-biopolymer system is composed by poly(L-lactic acid) (PLLA) and holmium acetylacetonate (HoAcAc). The importance of the holmium high content in the microspheres can be interpreted as follow from a therapeutic standpoint, to achieve an effective use of microspheres loaded with HoAcAc, a high content of holmium is required to yield enough radioactivity with a relatively low amount of microspheres.The usual amounts of holmium that are incorporated in the microspheres composed by poly(L-lactic acid) and HoAcAc are 17.0 {+-} 0.5% (w/w) of holmium, which corresponds to a loading of about 50% of HoAcAc. Different approaches have been investigated to increase that value. One updated approach towards this direction is the production of microspheres with ultrahigh holmium as matrix using HoAcAc crystals as the sole starting material without the use of biopolymer. Likewise, in the search of microspheres with increased holmium content , it has been demonstrated that by changing the HoAcAc crystal structure by its recrystallization from crystal phase to the amorphous there is lost of acetylacetonate and water molecules causing the increasing of the holmium content. Microspheres were prepared by solvent evaporation, using holmium acetylacetonate (HoAcAc) crystals as the sole ingredient. Microspheres were characterized by using light and scanning electron microscopy, infrared and Raman spectroscopy, differential scanning calorimetry, X-rays diffraction, and confocal laser scanning microscopy. (author)

  10. A Place for Content Literacy: Incorporating Vocabulary and Comprehension Strategies in the High School Science Classroom

    Science.gov (United States)

    Misulis, Katherine E.

    2011-01-01

    To help students learn and apply science content, teachers can embed content literacy instruction within science instruction. This involves teaching the content and the literacy skills students need to learn that content, such as vocabulary and comprehension. In this article, the author provides tips on how to incorporate content literacy…

  11. High content analysis of phagocytic activity and cell morphology with PuntoMorph.

    Science.gov (United States)

    Al-Ali, Hassan; Gao, Han; Dalby-Hansen, Camilla; Peters, Vanessa Ann; Shi, Yan; Brambilla, Roberta

    2017-11-01

    Phagocytosis is essential for maintenance of normal homeostasis and healthy tissue. As such, it is a therapeutic target for a wide range of clinical applications. The development of phenotypic screens targeting phagocytosis has lagged behind, however, due to the difficulties associated with image-based quantification of phagocytic activity. We present a robust algorithm and cell-based assay system for high content analysis of phagocytic activity. The method utilizes fluorescently labeled beads as a phagocytic substrate with defined physical properties. The algorithm employs statistical modeling to determine the mean fluorescence of individual beads within each image, and uses the information to conduct an accurate count of phagocytosed beads. In addition, the algorithm conducts detailed and sophisticated analysis of cellular morphology, making it a standalone tool for high content screening. We tested our assay system using microglial cultures. Our results recapitulated previous findings on the effects of microglial stimulation on cell morphology and phagocytic activity. Moreover, our cell-level analysis revealed that the two phenotypes associated with microglial activation, specifically cell body hypertrophy and increased phagocytic activity, are not highly correlated. This novel finding suggests the two phenotypes may be under the control of distinct signaling pathways. We demonstrate that our assay system outperforms preexisting methods for quantifying phagocytic activity in multiple dimensions including speed, accuracy, and resolution. We provide a framework to facilitate the development of high content assays suitable for drug screening. For convenience, we implemented our algorithm in a standalone software package, PuntoMorph. Copyright © 2017 Elsevier B.V. All rights reserved.

  12. Foraminiferal indicators of high OC content in marine sediments; a question of OC source?

    Science.gov (United States)

    Lo Giudice Cappelli, Elena; Austin, William; Smith, Laura; Ward, Hannah; Clarke, Jess; Green, Jade; Smeaton, Craig

    2017-04-01

    West Shetland voes (sea inlets), on Scotland northern maritime periphery, represent a range of environmental and depositional settings in an area of coastal ocean which is characterised by a generally high organic carbon content in marine sediments. Possible sources of organic carbon are fish farms, as this region is experiencing a large expansion in marine aquaculture, and/or erosion of peatland. Twenty-one sites in six voes were sampled in August 2015 following an organic carbon gradient. The aims of this study are: 1) to establish the modern biogeography of benthic foraminifera in west Shetland voes, 2) to explore the use of these organisms as bio-indicators of high organic carbon content in marine sediments, and 3) to trace the source of organic carbon and its transportation between different habitats and pools (e.g.: terrestrial to marine; marine aquaculture to sediments). To achieve this, we paired together spatial variations in the composition of benthic foraminiferal assemblages (species abundance and diversity) with changes in the physical properties of marine sediments determined by carbon stable isotope measurements and loss on ignition analysis. Preliminary results show a positive relationship between high abundance of the agglutinated benthic foraminifera Eggerelloides scaber, high organic carbon content in the sediments and proximity to fish farms. Although aquaculture farming in these areas may be a contributing factor, radiocarbon dates demonstrate that organic enrichment in the sediments pre-dates the introduction of aquaculture, while carbon stable isotope measurements point to peat erosion as a more likely source of organic carbon in west Shetland voes. Therefore, peatland erosion is a significant source of organic carbon in marine sediments and may be an important contributor to the store of blue carbon in west Shetland voes and, more in general, in the coastal ocean.

  13. New Literacies and Pedagogical Migration: Exploring Impacts of New Literacies on Instruction and Learning in High School Content Classrooms

    Science.gov (United States)

    Mooney, Melody Anne

    2013-01-01

    The purpose of this study is to examine the impacts of integrating new literacies practices into high school curriculum content classrooms. This study examined data collected through observations and semi-structured interviews conducted with four high school content curriculum teachers. Analysis of the data resulted in essential findings emerging…

  14. Molecular Assisted Breeding and Adaptability Analysis of Zhongyouza 11 with Super High Oil Content

    Institute of Scientific and Technical Information of China (English)

    2007-01-01

    Using a three-line system of Shaan 2A cytoplasmic male sterility, a hybrid variety rapeseed, Zhongyouza 11, was developed by the combination of traditional methods and a molecular marker-assisted breeding technique. This hybrid variety had high grain yield, high oil content, wide adaptability, and good quality. The oil content of Zhongyouza 11 is steadily above 43% in the three ecological regions along the Yangtze River valley, which is the largest winter oilseed production area in China. The highest oil content of Zhongyouza 11 reached 46.68% in the upper reaches of the Yangtze River valley in 2003-2004, which was the highest among all lines involved in the national regional rapeseed variety trials. In the regional yield trials in Hubei Province, the average yield of Zhongyouza 11 reached 2 853 kg ha-1 (2002-2004), yielding more than the control variety Zhongshuang 6 by 11.34%. In the national trials, the yield of Zhongyouza 11 reached 2 405.7, 2 697.3, and 2 770.2 kg ha-1 in the upper, middle, and lower reaches of the Yangtze River valley, yielding more than the control varieties by 11.52, 12.9, and 14.92%, respectively, in 2003-2005. Both the high oil content and high grain yield contributed to the high oil yield of Zhongyouza 11. The oil yield of Zhongyouza 11 in the national trials reached 1083.3, 1210.2, and 1224.8 kg ha-1, yielding more than the controls by 29.42, 27.65, and 20.98%, respectively, in the upper, middle, and lower reaches of the Yangtze River valley. The highest oil yield reached 1369.65 kg ha-1 in the middle reach of the Yangtze River valley(2003-2004), with an increase of 46.21% compared to the control. The experimental sites distributed widely along the Yangtze River valley, cover most of the Chinese winter rapeseed production areas. Among the 89 experimental location/years, the yield of Zhongyouza 11 surpassed the controls at 77 location/years in the trials, indicating its wide adaptability.Zhongyouza 11 was the only one that passed the

  15. High phosphorylase activity is correlated with increased potato minituber formation and starch content during extended clinorotation

    Science.gov (United States)

    Nedukha, O. M.; Schnyukova, E. I.; Leach, J. E.

    2003-05-01

    The major purpose of these experiments were to investigate growth of potato storage organs and starch synthesis in minitubers at slow horizontal clinorotation (2 rpm), which partly mimics microgravity, and a secondary goal was to study the activity and localization of phosphorylase (EC 2.4.1.1) in storage parenchyma under these conditions. Miniplants of Solanum tuberosum L. (cv Adreta) were grown in culture for 30 days for both the vertical control and the horizontal clinorotation. During long-term clinorotation, an acceleration of minituber formation, and an increase of amyloplast number and size in storage parenchyma cells, as well as increased starch content, was observed in the minitubers. The differences among cytochemical reaction intensity, activity of phosphorylase, and carbohydrate content in storage parenchyma cells of minitubers grown in a horizontal clinostat were established by electron-cytochemical and biochemical methods. It is shown that high phosphorylase activity is correlated with increased starch content during extended clinorotation. The results demonstrate the increase in carbohydrate metabolism and possible accelerated growth of storage organs under the influence of microgravity, as mimicked by clinorotation; therefore, clinorotation can be used as a basis for future studies on mechanisms of starch synthesis under microgravity.

  16. Thermogravimetric Analysis of Effects of High-Content Limstone Addition on Combustion Characteristics of Taixi Anthracite

    Institute of Scientific and Technical Information of China (English)

    ZHANG Hong; LI Mei; SUN Min; WEI Xian-yong

    2004-01-01

    Combustion characteristics of Taixi anthracite admixed with high content of limestone addition were investigated with thermogravimetric analysis. The results show that limestone addition has a little promoting effect on the ignition of raw coals as a whole. The addition of limestone is found to significantly accelerate the combustion and burnout of raw coals. The higher the sample mass is, the more significant the effect will be. The results also show that the change of limestone proportion between 45%-80% has little effect on ignition temperatures of coal in the blended samples. Increasing limestone content lowers the temperature corresponding to the maximum weight loss. Although higher maximum mass loss rates are observed with higher limestone content, the effect is found not ascribed to changing limestone addition, but to the decrease of absolute coal mass in the sample. The change of limestone proportion has little effect on its burnout temperature. Mechanism analysis indicates that these phenomena result mainly from improved heat conduction due to limestone addition.

  17. Biodiesel from the seed oil of Treculia africana with high free fatty acid content

    Energy Technology Data Exchange (ETDEWEB)

    Adewuyi, Adewale [Redeemer' s University, Department of Chemical Sciences, Faculty of Natural Sciences, Redemption City, Ogun State (Nigeria); Oderinde, Rotimi A.; Ojo, David F.K. [University of Ibadan, Industrial Unit, Department of Chemistry, Ibadan, Oyo State (Nigeria)

    2012-12-15

    Oil was extracted from the seed of Treculia africana using hexane. The oil was characterized and used in the production of biodiesel. Biodiesel was produced from the seed oil of T. africana using a two-step reaction system. The first step was a pretreatment which involved the use of 2 % sulfuric acid in methanol, and secondly, transesterification reaction using KOH as catalyst. Saponification value of the oil was 201.70 {+-} 0.20 mg KOH/g, free fatty acid was 8.20 {+-} 0.50 %, while iodine value was 118.20 {+-} 0.50 g iodine/100 g. The most dominant fatty acid was C18:2 (44 %). The result of the method applied showed a conversion which has ester content above 98 %, flash point of 131 {+-} 1.30 C, and phosphorus content below 1 ppm in the biodiesel. The biodiesel produced exhibited properties that were in agreement with the European standard (EN 14214). This study showed that the high free fatty acid content of T. africana seed oil can be reduced in a one-step pretreatment of esterification reaction using H{sub 2}SO{sub 4} as catalyst. (orig.)

  18. Factor analysis in optimization of formulation of high content uniformity tablets containing low dose active substance.

    Science.gov (United States)

    Lukášová, Ivana; Muselík, Jan; Franc, Aleš; Goněc, Roman; Mika, Filip; Vetchý, David

    2017-09-11

    Warfarin is intensively discussed drug with narrow therapeutic range. There have been cases of bleeding attributed to varying content or altered quality of the active substance. Factor analysis is useful for finding suitable technological parameters leading to high content uniformity of tablets containing low amount of active substance. The composition of tabletting blend and technological procedure were set with respect to factor analysis of previously published results. The correctness of set parameters was checked by manufacturing and evaluation of tablets containing 1-10mg of warfarin sodium. The robustness of suggested technology was checked by using "worst case scenario" and statistical evaluation of European Pharmacopoeia (EP) content uniformity limits with respect to Bergum division and process capability index (Cpk). To evaluate the quality of active substance and tablets, dissolution method was developed (water; EP apparatus II; 25rpm), allowing for statistical comparison of dissolution profiles. Obtained results prove the suitability of factor analysis to optimize the composition with respect to batches manufactured previously and thus the use of metaanalysis under industrial conditions is feasible. Copyright © 2017 Elsevier B.V. All rights reserved.

  19. Mutational breeding and genetic engineering in the development of high grain protein content.

    Science.gov (United States)

    Wenefrida, Ida; Utomo, Herry S; Linscombe, Steve D

    2013-12-04

    Cereals are the most important crops in the world for both human consumption and animal feed. Improving their nutritional values, such as high protein content, will have significant implications, from establishing healthy lifestyles to helping remediate malnutrition problems worldwide. Besides providing a source of carbohydrate, grain is also a natural source of dietary fiber, vitamins, minerals, specific oils, and other disease-fighting phytocompounds. Even though cereal grains contain relatively little protein compared to legume seeds, they provide protein for the nutrition of humans and livestock that is about 3 times that of legumes. Most cereal seeds lack a few essential amino acids; therefore, they have imbalanced amino acid profiles. Lysine (Lys), threonine (Thr), methionine (Met), and tryptophan (Trp) are among the most critical and are a limiting factor in many grain crops for human nutrition. Tremendous research has been put into the efforts to improve these essential amino acids. Development of high protein content can be outlined in four different approaches through manipulating seed protein bodies, modulating certain biosynthetic pathways to overproduce essential and limiting amino acids, increasing nitrogen relocation to the grain through the introduction of transgenes, and exploiting new genetic variance. Various technologies have been employed to improve protein content including conventional and mutational breeding, genetic engineering, marker-assisted selection, and genomic analysis. Each approach involves a combination of these technologies. Advancements in nutrigenomics and nutrigenetics continue to improve public knowledge at a rapid pace on the importance of specific aspects of food nutrition for optimum fitness and health. An understanding of the molecular basis for human health and genetic predisposition to certain diseases through human genomes enables individuals to personalize their nutritional requirements. It is critically important

  20. Comparison of three cell fixation methods for high content analysis assays utilizing quantum dots.

    Science.gov (United States)

    Williams, Y; Byrne, S; Bashir, M; Davies, A; Whelan, A; Gun'ko, Y; Kelleher, D; Volkov, Y

    2008-10-01

    Semiconductor nanoparticles or quantum dots are being increasingly utilized as fluorescent probes in cell biology both in live and fixed cell assays. Quantum dots possess an immense potential for use in multiplexing assays that can be run on high content screening analysers. Depending on the nature of the biological target under investigation, experiments are frequently required on cells retaining an intact cell membrane or also on those that have been fixed and permeabilized to expose intracellular antigens. Fixation of cell lines before or after the addition of quantum dots may affect their localization, emission properties and stability. Using a high content analysis platform we perform a quantitative comparative analysis of three common fixation techniques in two different cell lines exposed to carboxylic acid stabilized CdTe quantum dots. Our study demonstrates that in prefixed and permeabilized cells, quantum dots are readily internalized regardless of cell type, and their intracellular location is primarily determined by the properties of the quantum dots themselves. However, if the fixation procedures are preformed on live cells previously incubated with quantum dots, other important factors have to be considered. The choice of the fixative significantly influences the fluorescent characteristics of the quantum dots. Fixatives, regardless of their chemical nature, negatively affected quantum dots fluorescence intensity. Comparative analysis of gluteraldehyde, methanol and paraformaldehyde demonstrated that 2% paraformaldehyde was the fixative of choice. The presence of protein in the media did not significantly alter the quantum dot fluorescence. This study indicates that multiplexing assays utilizing quantum dots, despite being a cutting edge tool for high content cell imaging, still require careful consideration of the basic steps in biological sample processing.

  1. [Characteristics of anaerobic sequencing batch reactor for the treatment of high-solids-content waste].

    Science.gov (United States)

    Wang, Zhi-jun; Wang, Wei; Zhang, Xi-hui

    2006-06-01

    Based on the experiments of digestion of thermo-hydrolyzed sewage sludge in both mesophilic and thermophilic anaerobic sequencing batch reactors (ASBRs) with 20, 10, 7.5, 5d hydraulic retention time (HRT), operating characteristics of ASBR for treatment of high-solids-content waste were investigated. ASBR can efficiently accumulates suspended solids and keep high concentration solids, however there exists a "critical point" of ASBR, which means the maximum capability to accumulate suspended solids without negative effects on ASBR stability, and beyond which the performance deteriorates. Under steady condition, ASBR can sustains high solid retention time (SRT) and mean cell retention time (MCRT), the SRT and MCRT is 2.53 approximately 3.73 and 2.03 approximately 3.14 times of hydraulic retention time (HRT) when treating thermo-hydrolyzed sludge, respectively. Therefore, compared to traditional continuous-flow stirred tank reactor (CSTR), the efficiency of ASBR enhances about 7.13% approximately 34.68%.

  2. FBC desulfurization process using coal with low sulfur content, high oxidizing conditions and metamorphic limestones

    Directory of Open Access Journals (Sweden)

    S. R. Bragança

    2009-06-01

    Full Text Available A metamorphic limestone and a dolomite were employed as SO2 sorbents in the desulfurization of gas from coal combustion. The tests were performed in a fluidized bed reactor on a bench and pilot scale. Several parameters such as bed temperature, sorbent type, and sorbent particle size at different Ca/S molar ratios were analyzed. These parameters were evaluated for the combustion of coal with low-sulfur/high-ash content, experimental conditions of high air excess and high O2 level in fluidization air. Under these conditions, typical of furnaces, few published data can be found. In this work, a medium level of desulfurization efficiency (~60% for Ca/S = 2 was obtained.

  3. FBC desulfurization process using coal with low sulfur content, high oxidizing conditions and metamorphic limestones

    Energy Technology Data Exchange (ETDEWEB)

    Braganca, S.R.; Castellan, J.L. [Universidade Federal do Rio Grande do Sul, Porto Alegre (Brazil)

    2009-04-15

    A metamorphic limestone and a dolomite were employed as SO{sub 2} sorbents in the desulfurization of gas from coal combustion. The tests were performed in a fluidized bed reactor on a bench and pilot scale. Several parameters such as bed temperature, sorbent type, and sorbent particle size at different Ca/S molar ratios were analyzed. These parameters were evaluated for the combustion of coal with low-sulfur/high-ash content, experimental conditions of high air excess and high O{sub 2} level in fluidization air. Under these conditions, typical of furnaces, few published data can be found. In this work, a medium level of desulfurization efficiency (similar to 60%) for Ca/S = 2 was obtained.

  4. FBC desulfurization process using coal with low sulfur content, high oxidizing conditions and metamorphic limestones

    Energy Technology Data Exchange (ETDEWEB)

    S.R. Braganca; J.L. Castellan [Federal University of Rio Grande do Sul, Porto Alegre (Brazil)

    2009-07-01

    A metamorphic limestone and a dolomite were employed as SO{sub 2} sorbents in the desulfurization of gas from coal combustion. The tests were performed in a fluidised bed reactor on a bench and pilot scale. Several parameters such as bed temperature, sorbent type, and sorbent particle size at different Ca/S molar ratios were analyzed. These parameters were evaluated for the combustion of coal with low-sulfur/high-ash content, experimental conditions of high air excess and high O{sub 2} level in fluidization air. Under these conditions, typical of furnaces, few published data can be found. In this work, a medium level of desulfurization efficiency (about 60%) for Ca/S = 2 was obtained. 25 refs., 5 figs.

  5. Automated analysis of high-content microscopy data with deep learning.

    Science.gov (United States)

    Kraus, Oren Z; Grys, Ben T; Ba, Jimmy; Chong, Yolanda; Frey, Brendan J; Boone, Charles; Andrews, Brenda J

    2017-04-18

    Existing computational pipelines for quantitative analysis of high-content microscopy data rely on traditional machine learning approaches that fail to accurately classify more than a single dataset without substantial tuning and training, requiring extensive analysis. Here, we demonstrate that the application of deep learning to biological image data can overcome the pitfalls associated with conventional machine learning classifiers. Using a deep convolutional neural network (DeepLoc) to analyze yeast cell images, we show improved performance over traditional approaches in the automated classification of protein subcellular localization. We also demonstrate the ability of DeepLoc to classify highly divergent image sets, including images of pheromone-arrested cells with abnormal cellular morphology, as well as images generated in different genetic backgrounds and in different laboratories. We offer an open-source implementation that enables updating DeepLoc on new microscopy datasets. This study highlights deep learning as an important tool for the expedited analysis of high-content microscopy data. © 2017 The Authors. Published under the terms of the CC BY 4.0 license.

  6. High-content analysis screening for cell cycle regulators using arrayed synthetic crRNA libraries.

    Science.gov (United States)

    Strezoska, Žaklina; Perkett, Matthew R; Chou, Eldon T; Maksimova, Elena; Anderson, Emily M; McClelland, Shawn; Kelley, Melissa L; Vermeulen, Annaleen; Smith, Anja van Brabant

    2017-06-10

    The CRISPR-Cas9 system has been utilized for large-scale, loss-of-function screens mainly using lentiviral pooled formats and cell-survival phenotypic assays. Screening in an arrayed format expands the types of phenotypic readouts that can be used to now include high-content, morphology-based assays, and with the recent availability of synthetic crRNA libraries, new studies are emerging. Here, we use a cell cycle reporter cell line to perform an arrayed, synthetic crRNA:tracrRNA screen targeting 169 genes (>600 crRNAs) and used high content analysis (HCA) to identify genes that regulate the cell cycle. Seven parameters were used to classify cells into cell cycle categories and multiple parameters were combined using a new analysis technique to identify hits. Comprehensive hit follow-up experiments included target gene expression analysis, confirmation of DNA insertions/deletions, and validation with orthogonal reagents. Our results show that most hits had three or more independent crRNAs per gene that demonstrated a phenotype with consistent individual parameters, indicating that our screen produced high-confidence hits with low off-target effects and allowed us to identify hits with more subtle phenotypes. The results of our screen demonstrate the power of using arrayed, synthetic crRNAs for functional phenotypic screening using multiparameter HCA assays. Copyright © 2017 The Author(s). Published by Elsevier B.V. All rights reserved.

  7. Detection of abnormally high amygdalin content in food by an enzyme immunoassay.

    Science.gov (United States)

    Cho, A-Yeon; Yi, Kye Sook; Rhim, Jung-Hyo; Kim, Kyu-Il; Park, Jae-Young; Keum, Eun-Hee; Chung, Junho; Oh, Sangsuk

    2006-04-30

    Amygdalin is a cyanogenic glycoside compound which is commonly found in the pits of many fruits and raw nuts. Although amygdalin itself is not toxic, it can release cyanide (CN) after hydrolysis when the pits and nuts are crushed, moistened and incubated, possibly within the gastrointestinal tract. CN reversibly inhibits cellular oxidizing enzymes and cyanide poisoning generates a range of clinical symptoms. As some pits and nuts may contain unusually high levels of amygdalin such that there is a sufficient amount to induce critical CN poisoning in humans, the detection of abnormal content of amygdalin in those pits and nuts can be a life-saving measure. Although there are various methods to detect amygdalin in food extracts, an enzyme immunoassay has not been developed for this purpose. In this study we immunized New Zealand White rabbits with an amygdalin-KLH (keyhole limpet hemocyanin) conjugate and succeeded in raising anti-sera reactive to amygdalin, proving that amygdalin can behave as a hapten in rabbits. Using this polyclonal antibody, we developed a competition enzyme immunoassay for determination of amygdalin concentration in aqueous solutions. This technique was able to effectively detect abnormally high amygdalin content in various seeds and nuts. In conclusion, we proved that enzyme immunoassay can be used to determine the amount of amygdalin in food extracts, which will allow automated analysis with high throughput.

  8. Tenside-free preparation of nanogels with high functional β-cyclodextrin content.

    Science.gov (United States)

    Kettel, Markus J; Hildebrandt, Haika; Schaefer, Karola; Moeller, Martin; Groll, Juergen

    2012-09-25

    We present the preparation of ultrafine (R(h), 50 -150 nm) nanogels through tenside-free condensation of reactive prepolymers with β-cyclodextrin (β-CD) in water. These nanogels possess a maximum content of 60 wt % functional β-CD that can form inclusion complexes as demonstrated by dye sorption with phenolphthalein. Aside of this extremely high uptake capacity to hydrophobic molecules, the nanogels also show good adhesion to surfaces in homogeneous distribution with size of R(h) of 25 nm under dry conditions.

  9. Process Modules for GeSn Nanoelectronics with high Sn-contents

    OpenAIRE

    Schulte-Braucks, C; Glass, S; Hofmann, E; Stange, D; Von Den Driesch, N; Hartmann, JM; Ikonic, Z; Zhao, GT; Buca, D.; Mantl, S

    2017-01-01

    This paper systematically studies GeSn n-FETs, from individual process modules to a complete device. High-k gate stacks and NiGeSn metallic contacts for source and drain are characterized in independent experiments. To study both direct and indirect bandgap semiconductors, a range of 0 at.% to 14.5 at.% Sn-content GeSn alloys are investigated. Special emphasis is placed on capacitance-voltage (C-V) characteristics and Schottky-barrier optimization. GeSn n-FET devices are presented including t...

  10. Desulphurisation of high moisture content fuel-gases derived from low-rank coals

    Energy Technology Data Exchange (ETDEWEB)

    Hodges, S.; Anderson, B. [HRL Technology, Mulgrave, Vic. (Australia); Abbasian, J.; Slimane, R.B. [Inst. of Gas Technology, Des Plaines, IL (United States)

    1999-07-01

    Regenerable sulphur sorbent materials have been developed specifically for fluidised-bed desulphurisation of high moisture content fuel-gases derived from the gasification of low-rank coals. Selection of the most appropriate sorbents was based on thermodynamic limitations, strength/attrition resistance, reactivity and sulphur capacity. Pilot-scale tests showed that sorbents based on iron and copper were able to reduce the level of H{sub 2}S in the fuel-gas (up to 2.5 MPa, 350 C) from about 3000 ppmv to less than 100 ppmv. (orig.)

  11. Optimal Dearsenification Parameters of Gold Sulfide Concentrate with a High As Content

    Institute of Scientific and Technical Information of China (English)

    Yaozhong LAN; Rose W. Smith

    2005-01-01

    The gold sulfide concentrate with a high As content in Liangshan District, Sichuan Province, China, is a potentially important resource. This paper describes experiments of dearsenification of gold concentrate in a weakly reduced atmosphere in a rotary pipe furnace. The results showed that the optimal parameters were a temperature range of 650~700℃, 15%~16% CO2 of gas and a reaction time of 30~40 min. The removal rate of arsenic and sulfur was over 95% and 25%~28%, respectively. With further oxidization and roasting, residue sulfur in the roasted materials was dropped to below 4%, and the cyanide leaching recovery of gold was over 92%.

  12. Non-metallic inclusions structure dimension in high quality steel with medium carbon contents

    Directory of Open Access Journals (Sweden)

    T. Lipiński

    2009-07-01

    Full Text Available The experimental material consisted of semi-finished products of high-grade, medium-carbon structural steel. The production process involved two melting technologies: steel melting in a 140-ton basic arc furnace with desulfurization and argon refining variants, and in a 100-ton oxygen converter. Billet samples were collected to analyze the content of non-metallic inclusions with the use of an optical microscope and a video inspection microscope. The results were processed and presented in graphic form.

  13. Identification of Novel Macropinocytosing Human Antibodies by Phage Display and High-Content Analysis.

    Science.gov (United States)

    Ha, K D; Bidlingmaier, S M; Su, Y; Lee, N-K; Liu, B

    2017-01-01

    Internalizing antibodies have great potential for the development of targeted therapeutics. Antibodies that internalize via the macropinocytosis pathway are particularly promising since macropinocytosis is capable of mediating rapid, bulk uptake and is selectively upregulated in many cancers. We hereby describe a method for identifying antibodies that internalize via macropinocytosis by screening phage-displayed single-chain antibody selection outputs with an automated fluorescent microscopy-based high-content analysis platform. Furthermore, this method can be similarly applied to other endocytic pathways if other fluorescent, pathway-specific, soluble markers are available. © 2017 Elsevier Inc. All rights reserved.

  14. Thermal expansion behavior of A- and B-type amylose crystals in the low-temperature region.

    Science.gov (United States)

    Kobayashi, Kayoko; Kimura, Satoshi; Naito, Philip-Kunio; Togawa, Eiji; Wada, Masahisa

    2015-10-20

    The thermal expansion behaviors of A-type and B-type amylose crystals, which were prepared by recrystallization of short amylose chains synthesized by phosphorylase, were investigated using synchrotron X-ray powder diffraction between 100 and 300K. For both types of crystals, the room-temperature phase (RT phase), which is the usually observed phase, transitioned to a low-temperature phase (LT phase), on cooling. The phase transitions took place reversibly with rapid changes in the unit-cell parameters around 200-270K. The differences between the RT and LT phase were investigated using solid-state (13)C NMR spectroscopy, which revealed there were changes in molecular chain conformations. These results suggest that the phase transition of water molecules on the crystalline surfaces affects the thermal behavior and structure of polysaccharide crystals.

  15. Allelic variants of the amylose extender mutation of maize demonstrate phenotypic variation in starch structure resulting from modified protein–protein interactions

    Science.gov (United States)

    Liu, Fushan; Ahmed, Zaheer; Lee, Elizabeth A.; Donner, Elizabeth; Liu, Qiang; Ahmed, Regina; Morell, Matthew K.; Emes, Michael J.; Tetlow, Ian J.

    2012-01-01

    amylose extender (ae−) starches characteristically have modified starch granule morphology resulting from amylopectin with reduced branch frequency and longer glucan chains in clusters, caused by the loss of activity of the major starch branching enzyme (SBE), which in maize endosperm is SBEIIb. A recent study with ae− maize lacking the SBEIIb protein (termed ae1.1 herein) showed that novel protein–protein interactions between enzymes of starch biosynthesis in the amyloplast could explain the starch phenotype of the ae1.1 mutant. The present study examined an allelic variant of the ae− mutation, ae1.2, which expresses a catalytically inactive form of SBEIIb. The catalytically inactive SBEIIb in ae1.2 lacks a 28 amino acid peptide (Val272–Pro299) and is unable to bind to amylopectin. Analysis of starch from ae1.2 revealed altered granule morphology and physicochemical characteristics distinct from those of the ae1.1 mutant as well as the wild-type, including altered apparent amylose content and gelatinization properties. Starch from ae1.2 had fewer intermediate length glucan chains (degree of polymerization 16–20) than ae1.1. Biochemical analysis of ae1.2 showed that there were differences in the organization and assembly of protein complexes of starch biosynthetic enzymes in comparison with ae1.1 (and wild-type) amyloplasts, which were also reflected in the composition of starch granule-bound proteins. The formation of stromal protein complexes in the wild-type and ae1.2 was strongly enhanced by ATP, and broken by phosphatase treatment, indicating a role for protein phosphorylation in their assembly. Labelling experiments with [γ-32P]ATP showed that the inactive form of SBEIIb in ae1.2 was phosphorylated, both in the monomeric form and in association with starch synthase isoforms. Although the inactive SBEIIb was unable to bind starch directly, it was strongly associated with the starch granule, reinforcing the conclusion that its presence in the

  16. Experiences of High School Students about the Predictors of Tobacco Use: a Directed Qualitative Content Analysis

    Directory of Open Access Journals (Sweden)

    Mahmoud Ghasemi

    2015-12-01

    Full Text Available Background and Objectives: Tobacco use is one of the most important risk factors that increases the burden of diseases worldwide. Based on the increasing speed of tobacco use, the aim of the present study was to explain the experiences of high school students about the determiners of use and non-use of tobacco (cigarettes and hookah based on the theory of protection motivation. Materials and Methods: The present study is a qualitative study based on content analysis that has been carried out for five months from 22, November of 2014 to 20, April of 2015 on male high schools in Noshahr. Data were collected in the form of semi-structured interviews from 21 male high school students of whom 7 smoked cigarettes, 7 used hookah and 7 of them did not use any type of tobacco. Data analysis was carried out through the use of directed qualitative content analysis. Results: Data analysis led to the extraction of 99 primary codes that were categorized into 9 predetermined levels of protection motivation theory including perceived sensitivity, perceived intensity, fear, perceived self-efficacy, response expense, efficiency of the perceived answer, external perceived reward, internal perceived reward, protection motivation. The findings of the study showed that the most important predictors for the use of tobacco were the structures of response expense and high perceived rewards and the most important predictors for non-use of tobacco were perceived sensitivity, perceived intensity and high self-efficacy of students. Conclusions: the findings of the present study showed that the pressure from peers, being present in a group using tobacco and the absence of alternative recreational activities are among the most important factors of using tobacco. So, it is suggested that planners of the health department take the comprehensive interventions to improve effective individual and environmental factors of using tobacco so that they could reduce smoking cigarettes

  17. Impact of local hydrothermal treatment during bread baking on soluble amylose, firmness, amylopectin retrogradation and water mobility during bread staling.

    Science.gov (United States)

    Besbes, Emna; Le Bail, Alain; Seetharaman, Koushik

    2016-01-01

    The impact of hydrothermal processing undergone by bread dough during baking on the degree of starch granule disruption, on leaching of soluble amylose, on water mobility, on firmness and on amylopectin retrogradation during staling has been investigated. Two heating rates during baking have been considered (4.67 and 6.31 °C/min) corresponding respectively to baking temperature of 220 and 240 °C. An increase in firmness and in the amount of retrogradated amylopectin accompanied by a decrease in freezable water has been observed during staling. Although a lower heating rate yielded in larger amount of retrogradated amylopectin retrogradation, it resulted in a lower firmness. Additionally, the amount of soluble amylose and the relaxation times of water measured by Nuclear Magnetic Resonance NMR (T20, T21 and T22) decreased during staling. It was demonstrated that the amount of soluble amylose was higher for bread crumb baked at lower heating rate, indicating that an increasing amount of amylose is leached outside the starch granules. This was corresponding to a greater amount of retrograded amylopectin during staling. Moreover, it was found that the degree of gelatinization differs locally in a same bread slice between the top, the centre and the bottom locations in the crumb. This was attributed to the differences in kinetics of heating, the availability of water during baking and the degree of starch granule disruption during baking. Based on first order kinetic model, it was found that staling kinetics were faster for samples baked at higher heating rate.

  18. Biochemistry in the High School Textbook: A Distance Between Content And Students Reality?

    Directory of Open Access Journals (Sweden)

    A. Simões-Pires

    2012-05-01

    Full Text Available Several  contents  have  been  taught  in  a  decontextualized  way  within  the  area  of biology,  one  of  these  contents  is  Biochemistry.  Biochemistry  is  one  of  the  most present subjects in the student’s daily lives, because it can explain a huge number of  processes  that  happens  in  their  routine.  The  textbook  is  the  main  tool  in  the Brazilian  public  high  schools  classrooms,  so  a  huge  number  of  programs  to improve the textbooks were created by the government, like the National Program of the Textbook or PNLD( translated from the Portuguese ‘’Programa Nacional do Livro Didático’’. But despite the efforts to improve the textbook, their quality is still questionable, for such reasons like the distance between contents showed in the textbook and student’s reality. The main objective of this work is to evaluate how the  high  school  textbooks  show  the  content  related  to  biochemistry  and  how  this content is contextualized in the student’s reality.  To achieve this goal we analyzed four  textbooks  that  are  most  frequently  used  in  the  schools  today  and  evaluated parameters  related  with  contextualization  between  the  biochemistry  content  and students  daily  lives  situations.  The  analysis  was  done  on  a  qualitative  way.  We observed  a  lack  of  daily  examples  in  the  biochemical  contents,  an  excess  of scientific terms without clear explanations and also a huge presence of conceptual errors  in  all  four  textbooks.  The  data  showed  here  leads  us  to  conclude  that  the science’s textbooks analyzed in this study are inappropriate to teach biochemistry in an interesting way for the students.

  19. Fluorescence correlation spectroscopy as tool for high-content-screening in yeast (HCS-FCS)

    Science.gov (United States)

    Wood, Christopher; Huff, Joseph; Marshall, Will; Yu, Elden Qingfeng; Unruh, Jay; Slaughter, Brian; Wiegraebe, Winfried

    2011-03-01

    To measure protein interactions, diffusion properties, and local concentrations in single cells, Fluorescence Correlation Spectroscopy (FCS) is a well-established and widely accepted method. However, measurements can take a long time and are laborious. Therefore investigations are typically limited to tens or a few hundred cells. We developed an automated system to overcome these limitations and make FCS available for High Content Screening (HCS). We acquired data in an auto-correlation screen of more than 4000 of the 6000 proteins of the yeast Saccharomyces cerevisiae, tagged with eGFP and expanded the HCS to use cross-correlation between eGFP and mCherry tagged proteins to screen for molecular interactions. We performed all high-content FCS screens (HCS-FCS) in a 96 well plate format. The system is based on an extended Carl Zeiss fluorescence correlation spectrometer ConfoCor 3 attached to a confocal microscope LSM 510. We developed image-processing software to control these hardware components. The confocal microscope obtained overview images and we developed an algorithm to search for and detect single cells. At each cell, we positioned a laser beam at a well-defined point and recorded the fluctuation signal. We used automatic scoring of the signal for quality control. All data was stored and organized in a database based on the open source Open Microscopy Environment (OME) platform. To analyze the data we used the image processing language IDL and the open source statistical software package R.

  20. BioSig3D: High Content Screening of Three-Dimensional Cell Culture Models.

    Directory of Open Access Journals (Sweden)

    Cemal Cagatay Bilgin

    Full Text Available BioSig3D is a computational platform for high-content screening of three-dimensional (3D cell culture models that are imaged in full 3D volume. It provides an end-to-end solution for designing high content screening assays, based on colony organization that is derived from segmentation of nuclei in each colony. BioSig3D also enables visualization of raw and processed 3D volumetric data for quality control, and integrates advanced bioinformatics analysis. The system consists of multiple computational and annotation modules that are coupled together with a strong use of controlled vocabularies to reduce ambiguities between different users. It is a web-based system that allows users to: design an experiment by defining experimental variables, upload a large set of volumetric images into the system, analyze and visualize the dataset, and either display computed indices as a heatmap, or phenotypic subtypes for heterogeneity analysis, or download computed indices for statistical analysis or integrative biology. BioSig3D has been used to profile baseline colony formations with two experiments: (i morphogenesis of a panel of human mammary epithelial cell lines (HMEC, and (ii heterogeneity in colony formation using an immortalized non-transformed cell line. These experiments reveal intrinsic growth properties of well-characterized cell lines that are routinely used for biological studies. BioSig3D is being released with seed datasets and video-based documentation.

  1. Human pluripotent stem cells on artificial microenvironments: a high content perspective.

    Directory of Open Access Journals (Sweden)

    Priyalakshmi eViswanathan

    2014-07-01

    Full Text Available Self-renewing stem cell populations are increasingly considered as resources for cell therapy and tools for drug discovery. Human pluripotent stem (hPS cells in particular offer a virtually unlimited reservoir of homogeneous cells and can be differentiated towards diverse lineages. Many diseases show impairment in self-renewal or differentiation, abnormal lineage choice or other aberrant cell behavior in response to chemical or physical cues. To investigate these responses, there is a growing interest in the development of specific assays using hPS cells artificial microenvironments and high content analysis. Several hurdles need to be overcome that can be grouped in: (i availability of robust, homogeneous and consistent cell populations as a starting point; (ii appropriate understanding and use of chemical and physical microenvironments; (iii development of assays that dissect the complexity of cell populations in tissues while mirroring specific aspects of their behavior. Here we review recent progress in the culture of hPS cells and we detail the importance of the environment surrounding the cells with a focus on synthetic material and suitable high content analysis approaches. The technologies described if properly combined have the potential to create a paradigm shift in the way diseases are modelled and drug discovery is performed.

  2. A Liposomal Formulation Able to Incorporate a High Content of Paclitaxel and Exert Promising Anticancer Effect

    Directory of Open Access Journals (Sweden)

    Pei Kan

    2011-01-01

    Full Text Available A liposome formulation for paclitaxel was developed in this study. The liposomes, composed of naturally unsaturated and hydrogenated phosphatidylcholines, with significant phase transition temperature difference, were prepared and characterized. The liposomes exhibited a high content of paclitaxel, which was incorporated within the segregated microdomains coexisting on phospholipid bilayer of liposomes. As much as 15% paclitaxel to phospholipid molar ratio were attained without precipitates observed during preparation. In addition, the liposomes remained stable in liquid form at 4∘C for at least 6 months. The special composition of liposomal membrane which could reduce paclitaxel aggregation could account for such a capacity and stability. The cytotoxicity of prepared paclitaxel liposomes on the colon cancer C-26 cell culture was comparable to Taxol. Acute toxicity test revealed that LD50 for intravenous bolus injection in mice exceeded by 40 mg/kg. In antitumor efficacy study, the prepared liposomal paclitaxel demonstrated the increase in the efficacy against human cancer in animal model. Taken together, the novel formulated liposomes can incorporate high content of paclitaxel, remaining stable for long-term storage. These animal data also demonstrate that the liposomal paclitaxel is promising for further clinical use.

  3. Quantitative high content imaging of cellular adaptive stress response pathways in toxicity for chemical safety assessment.

    Science.gov (United States)

    Wink, Steven; Hiemstra, Steven; Huppelschoten, Suzanna; Danen, Erik; Niemeijer, Marije; Hendriks, Giel; Vrieling, Harry; Herpers, Bram; van de Water, Bob

    2014-03-17

    Over the past decade, major leaps forward have been made on the mechanistic understanding and identification of adaptive stress response landscapes underlying toxic insult using transcriptomics approaches. However, for predictive purposes of adverse outcome several major limitations in these approaches exist. First, the limited number of samples that can be analyzed reduces the in depth analysis of concentration-time course relationships for toxic stress responses. Second these transcriptomics analysis have been based on the whole cell population, thereby inevitably preventing single cell analysis. Third, transcriptomics is based on the transcript level, totally ignoring (post)translational regulation. We believe these limitations are circumvented with the application of high content analysis of relevant toxicant-induced adaptive stress signaling pathways using bacterial artificial chromosome (BAC) green fluorescent protein (GFP) reporter cell-based assays. The goal is to establish a platform that incorporates all adaptive stress pathways that are relevant for toxicity, with a focus on drug-induced liver injury. In addition, cellular stress responses typically follow cell perturbations at the subcellular organelle level. Therefore, we complement our reporter line panel with reporters for specific organelle morphometry and function. Here, we review the approaches of high content imaging of cellular adaptive stress responses to chemicals and the application in the mechanistic understanding and prediction of chemical toxicity at a systems toxicology level.

  4. High-content analysis of single cells directly assembled on CMOS sensor based on color imaging.

    Science.gov (United States)

    Tanaka, Tsuyoshi; Saeki, Tatsuya; Sunaga, Yoshihiko; Matsunaga, Tadashi

    2010-12-15

    A complementary metal oxide semiconductor (CMOS) image sensor was applied to high-content analysis of single cells which were assembled closely or directly onto the CMOS sensor surface. The direct assembling of cell groups on CMOS sensor surface allows large-field (6.66 mm×5.32 mm in entire active area of CMOS sensor) imaging within a second. Trypan blue-stained and non-stained cells in the same field area on the CMOS sensor were successfully distinguished as white- and blue-colored images under white LED light irradiation. Furthermore, the chemiluminescent signals of each cell were successfully visualized as blue-colored images on CMOS sensor only when HeLa cells were placed directly on the micro-lens array of the CMOS sensor. Our proposed approach will be a promising technique for real-time and high-content analysis of single cells in a large-field area based on color imaging.

  5. Development of high-content assays for kidney progenitor cell expansion in transgenic zebrafish.

    Science.gov (United States)

    Sanker, Subramaniam; Cirio, Maria Cecilia; Vollmer, Laura L; Goldberg, Natasha D; McDermott, Lee A; Hukriede, Neil A; Vogt, Andreas

    2013-12-01

    Reactivation of genes normally expressed during organogenesis is a characteristic of kidney regeneration. Enhancing this reactivation could potentially be a therapeutic target to augment kidney regeneration. The inductive events that drive kidney organogenesis in zebrafish are similar to the initial steps in mammalian kidney organogenesis. Therefore, quantifying embryonic signals that drive zebrafish kidney development is an attractive strategy for the discovery of potential novel therapeutic modalities that accelerate kidney regeneration. The Lim1 homeobox protein, Lhx1, is a marker of kidney development that is also expressed in the regenerating kidneys after injury. Using a fluorescent Lhx1a-EGFP transgene whose phenotype faithfully recapitulates that of the endogenous protein, we developed a high-content assay for Lhx1a-EGFP expression in transgenic zebrafish embryos employing an artificial intelligence-based image analysis method termed cognition network technology (CNT). Implementation of the CNT assay on high-content readers enabled automated real-time in vivo time-course, dose-response, and variability studies in the developing embryo. The Lhx1a assay was complemented with a kidney-specific secondary CNT assay that enables direct measurements of the embryonic renal tubule cell population. The integration of fluorescent transgenic zebrafish embryos with automated imaging and artificial intelligence-based image analysis provides an in vivo analysis system for structure-activity relationship studies and de novo discovery of novel agents that augment innate regenerative processes.

  6. Two-step in situ biodiesel production from microalgae with high free fatty acid content.

    Science.gov (United States)

    Dong, Tao; Wang, Jun; Miao, Chao; Zheng, Yubin; Chen, Shulin

    2013-05-01

    The yield of fatty acid methyl ester (FAME) from microalgae biomass is generally low via traditional extraction-conversion route due to the deficient solvent extraction. In this study a two-step in situ process was investigated to obtain a high FAME yield from microalgae biomass that had high free fatty acids (FFA) content. This was accomplished with a pre-esterification process using heterogeneous catalyst to reduce FFA content prior to the base-catalyzed transesterification. The two-step in situ process resulted in a total FAME recovery up to 94.87±0.86%, which was much higher than that obtained by a one-step acid or base catalytic in situ process. The heterogeneous catalyst, Amberlyst-15, could be used for 8 cycles without significant loss in activity. This process have the potential to reduce the production cost of microalgae-derived FAME and be more environmental compatible due to the higher FAME yield with reduced catalyst consumption.

  7. Optical High Content Nanoscopy of Epigenetic Marks Decodes Phenotypic Divergence in Stem Cells

    Science.gov (United States)

    Kim, Joseph J.; Bennett, Neal K.; Devita, Mitchel S.; Chahar, Sanjay; Viswanath, Satish; Lee, Eunjee A.; Jung, Giyoung; Shao, Paul P.; Childers, Erin P.; Liu, Shichong; Kulesa, Anthony; Garcia, Benjamin A.; Becker, Matthew L.; Hwang, Nathaniel S.; Madabhushi, Anant; Verzi, Michael P.; Moghe, Prabhas V.

    2017-01-01

    While distinct stem cell phenotypes follow global changes in chromatin marks, single-cell chromatin technologies are unable to resolve or predict stem cell fates. We propose the first such use of optical high content nanoscopy of histone epigenetic marks (epi-marks) in stem cells to classify emergent cell states. By combining nanoscopy with epi-mark textural image informatics, we developed a novel approach, termed EDICTS (Epi-mark Descriptor Imaging of Cell Transitional States), to discern chromatin organizational changes, demarcate lineage gradations across a range of stem cell types and robustly track lineage restriction kinetics. We demonstrate the utility of EDICTS by predicting the lineage progression of stem cells cultured on biomaterial substrates with graded nanotopographies and mechanical stiffness, thus parsing the role of specific biophysical cues as sensitive epigenetic drivers. We also demonstrate the unique power of EDICTS to resolve cellular states based on epi-marks that cannot be detected via mass spectrometry based methods for quantifying the abundance of histone post-translational modifications. Overall, EDICTS represents a powerful new methodology to predict single cell lineage decisions by integrating high content super-resolution nanoscopy and imaging informatics of the nuclear organization of epi-marks. PMID:28051095

  8. BioSig3D: High Content Screening of Three-Dimensional Cell Culture Models.

    Science.gov (United States)

    Bilgin, Cemal Cagatay; Fontenay, Gerald; Cheng, Qingsu; Chang, Hang; Han, Ju; Parvin, Bahram

    2016-01-01

    BioSig3D is a computational platform for high-content screening of three-dimensional (3D) cell culture models that are imaged in full 3D volume. It provides an end-to-end solution for designing high content screening assays, based on colony organization that is derived from segmentation of nuclei in each colony. BioSig3D also enables visualization of raw and processed 3D volumetric data for quality control, and integrates advanced bioinformatics analysis. The system consists of multiple computational and annotation modules that are coupled together with a strong use of controlled vocabularies to reduce ambiguities between different users. It is a web-based system that allows users to: design an experiment by defining experimental variables, upload a large set of volumetric images into the system, analyze and visualize the dataset, and either display computed indices as a heatmap, or phenotypic subtypes for heterogeneity analysis, or download computed indices for statistical analysis or integrative biology. BioSig3D has been used to profile baseline colony formations with two experiments: (i) morphogenesis of a panel of human mammary epithelial cell lines (HMEC), and (ii) heterogeneity in colony formation using an immortalized non-transformed cell line. These experiments reveal intrinsic growth properties of well-characterized cell lines that are routinely used for biological studies. BioSig3D is being released with seed datasets and video-based documentation.

  9. The Gray Institute ‘open’ high-content, fluorescence lifetime microscopes

    Science.gov (United States)

    BARBER, PR; TULLIS, IDC; PIERCE, GP; NEWMAN, RG; PRENTICE, J; ROWLEY, MI; MATTHEWS, DR; AMEER-BEG, SM; VOJNOVIC, B

    2013-01-01

    Summary We describe a microscopy design methodology and details of microscopes built to this ‘open’ design approach. These demonstrate the first implementation of time-domain fluorescence microscopy in a flexible automated platform with the ability to ease the transition of this and other advanced microscopy techniques from development to use in routine biology applications. This approach allows easy expansion and modification of the platform capabilities, as it moves away from the use of a commercial, monolithic, microscope body to small, commercial off-the-shelf and custom made modular components. Drawings and diagrams of our microscopes have been made available under an open license for noncommercial use at http://users.ox.ac.uk/~atdgroup. Several automated high-content fluorescence microscope implementations have been constructed with this design framework and optimized for specific applications with multiwell plates and tissue microarrays. In particular, three platforms incorporate time-domain FLIM via time-correlated single photon counting in an automated fashion. We also present data from experiments performed on these platforms highlighting their automated wide-field and laser scanning capabilities designed for high-content microscopy. Devices using these designs also form radiation-beam ‘end-stations’ at Oxford and Surrey Universities, showing the versatility and extendibility of this approach. PMID:23772985

  10. Corrosion Behavior of the Stressed Sensitized Austenitic Stainless Steels of High Nitrogen Content in Seawater

    Directory of Open Access Journals (Sweden)

    A. Almubarak

    2013-01-01

    Full Text Available The purpose of this paper is to study the effect of high nitrogen content on corrosion behavior of austenitic stainless steels in seawater under severe conditions such as tensile stresses and existence of sensitization in the structure. A constant tensile stress has been applied to sensitized specimens types 304, 316L, 304LN, 304NH, and 316NH stainless steels. Microstructure investigation revealed various degrees of stress corrosion cracking. SCC was severe in type 304, moderate in types 316L and 304LN, and very slight in types 304NH and 316NH. The electrochemical polarization curves showed an obvious second current peak for the sensitized alloys which indicated the existence of second phase in the structure and the presence of intergranular stress corrosion cracking. EPR test provided a rapid and efficient nondestructive testing method for showing passivity, degree of sensitization and determining IGSCC for stainless steels in seawater. A significant conclusion was obtained that austenitic stainless steels of high nitrogen content corrode at a much slower rate increase pitting resistance and offer an excellent resistance to stress corrosion cracking in seawater.

  11. Influence of complexation between amylose and a flavored model sponge cake on the degree of aroma compound release.

    Science.gov (United States)

    Pozo-Bayon, María-Angeles; Biais, Benoît; Rampon, Vincent; Cayot, Nathalie; Le Bail, Patricia

    2008-08-13

    Flavoring is used in the food industry to reinforce the aroma profile of baked cereal goods. During the processing of such products, interactions between starch and aroma compounds can occur, and this may have an impact on aroma release and perception. In the present study, 20 aroma compounds were tested to establish whether they formed complexes with amylose. The structure of the complexes was determined by wide-angle X-ray scattering (WAXS). A cocomplexation study proved that several complexing compounds could be present in the same crystalline aggregate. WAXS and differential scanning calorimetry (DSC) experiments were performed in a flavored model sponge cake at different steps of processing and showed that aroma compounds might form complexes with amylose in a sponge cake as they can do in simple system containing only amylose. Some of the aroma compounds trapped in the sponge cake were quantified, and their release behavior was followed by headspace analysis. The V-type structure could partly explain aroma retention in the product and the rate of aroma release.

  12. Amylose Phase Composition As Analyzed By FTIR In A Temperature Ramp: Influence Of Short Range Order On The Thermodynamic Properties

    Science.gov (United States)

    Bernazzani, Paul; Delmas, Genevieve

    1998-03-01

    Amylose, a major component of starch, is one of the most important biopolymers, being mainly associated with the pharmacological and food industries. Although widely studied, a complete control and understanding of the physical properties of amylose is still lacking. It is well known that structure and phase transition are important aspects of the functionality of biopolymers since they influence physical attributes such as appearance, digestibility, water holding capacity, etc. In the past, we have studied polyethylene phase composition by DSC in a very slow temperature (T) ramp (1K/h) and have demonstrated the presence and importance of short-range order on the polymer and its characteristics. In this study, we evaluated the phase composition of potato amylose and associated the thermodynamic properties with the presence of short-range order. Two methods were correlated, DSC (in a 1K/h T-ramp) and FTIR as a function of temperature, also in a 1K/h T-ramp. The effects of the various phases on thermodynamic properties such as gelation and enzyme or chemical resistance are discussed.

  13. Interaction between amylose and 1-butanol during 1-butanol-hydrochloric acid hydrolysis of normal rice starch.

    Science.gov (United States)

    Hu, Xiuting; Wei, Benxi; Zhang, Bao; Li, Hongyan; Xu, Xueming; Jin, Zhengyu; Tian, Yaoqi

    2013-10-01

    The aim of this study was to examine the interaction between amylose and 1-butanol during the 1-butanol-hydrochloric acid (1-butanol-HCl) hydrolysis of normal rice starch. The interaction model between amylose and 1-butanol was proposed using gas chromatography-mass spectrometry (GC-MS), (13)C cross polarization and magic angle spinning NMR analysis ((13)C CP/MAS NMR), differential scanning calorimetry (DSC), and thermalgravimetric analysis (TGA). GC-MS data showed that another form of 1-butanol existed in 1-butanol-HCl-hydrolyzed normal rice starch, except in the form of free molecules absorbed on the starch granules. The signal of 1-butanol-HCl-hydrolyzed starch at 100.1 ppm appeared in the (13)C CP/MAS NMR spectrum, indicating that the amylose-1-butanol complex was formed. DSC and TGA data also demonstrated the formation of the complex, which significantly affected the thermal properties of normal rice starch. These findings revealed that less dextrin with low molecular weight formed might be attributed to resistance of this complex to acid during 1-butanol-HCl hydrolysis.

  14. Preparation and characterization of new and improved soluble-starches, -amylose, and -amylopectin by reaction with benzaldehyde/zinc chloride.

    Science.gov (United States)

    Johnston, David A; Mukerjea, Rupendra; Robyt, John F

    2011-12-13

    Seven different starches from potato, rice, maize, waxymaize, amylomaize-VII, shoti, and tapioca, and potato amylose and potato amylopectin have been reacted with benzaldehyde, catalyzed by ZnCl(2), to give new water-soluble starches and water soluble-amylose and soluble-amylopectin. In contrast to the native starches, aqueous solutions of the modified starches could not be precipitated with 2-, 3-, or 4-volumes of ethanol. β-Amylase gave no reaction with the modified starches, in contrast to the native starches, indicating that the modification occurred exclusively at the nonreducing-ends, giving 4,6-benzylidene-D-glucopyranose at the nonreducing-ends. Reactions of α-amylase with native and modified potato and rice starches gave a decrease in the triiodide blue color and an increase in the reducing-value that were similar for the native- and modified-starches, indicating the modified starches had not been significantly altered by the modification. The benzaldehyde-modified starches and benzaldehyde-modified potato amylose and potato amylopectin components, therefore, have a starch structure very much like their native counterparts, in contrast to the Lintner, Small, and the alcohol/acid-hydrolyzed soluble-starches that have undergone acid hydrolysis. The benzaldehyde-modified starches and starch components have significantly higher water solubility than their native counterparts even though the structures of the modified starches had only been slightly altered from the structures of their native counterparts. They all gave crystal-clear solutions that did not retrograde.

  15. Kenaf Powder Filled Recycled High Density Polyethylene/Natural Rubber Biocomposites: The Effect of Filler Content

    Directory of Open Access Journals (Sweden)

    Xuan Viet Cao

    2012-09-01

    Full Text Available The performance of kenaf powder (KP as filler for recycled high density polyethylene (rHDPE/natural rubber (NR thermoplastic elastomer (TPE composites was investigated. The composites with different filler loading were prepared in a Haake internal mixer. Increasing KP loading in rHDPE/NR/KP biocomposites reduced the tensile strength, elongation at break but increased the stabilization torque and the tensile modulus. SEM study of fracture surface indicated that fibrillation of rHDPE was reduced and detachment of kenaf powder from polymer matrix was present particularly at high filler loading. These observations were responsible for the deterioration of tensile strength and elongation at break of rHDPE/NR/KP biocomposites. Water absorption study also showed that the water absorption of these biocomposites increased with increasing KP content.

  16. High-Content Analysis of CRISPR-Cas9 Gene-Edited Human Embryonic Stem Cells

    Directory of Open Access Journals (Sweden)

    Jared Carlson-Stevermer

    2016-01-01

    Full Text Available CRISPR-Cas9 gene editing of human cells and tissues holds much promise to advance medicine and biology, but standard editing methods require weeks to months of reagent preparation and selection where much or all of the initial edited samples are destroyed during analysis. ArrayEdit, a simple approach utilizing surface-modified multiwell plates containing one-pot transcribed single-guide RNAs, separates thousands of edited cell populations for automated, live, high-content imaging and analysis. The approach lowers the time and cost of gene editing and produces edited human embryonic stem cells at high efficiencies. Edited genes can be expressed in both pluripotent stem cells and differentiated cells. This preclinical platform adds important capabilities to observe editing and selection in situ within complex structures generated by human cells, ultimately enabling optical and other molecular perturbations in the editing workflow that could refine the specificity and versatility of gene editing.

  17. Comparison of multivariate data analysis strategies for high-content screening.

    Science.gov (United States)

    Kümmel, Anne; Selzer, Paul; Beibel, Martin; Gubler, Hanspeter; Parker, Christian N; Gabriel, Daniela

    2011-03-01

    High-content screening (HCS) is increasingly used in biomedical research generating multivariate, single-cell data sets. Before scoring a treatment, the complex data sets are processed (e.g., normalized, reduced to a lower dimensionality) to help extract valuable information. However, there has been no published comparison of the performance of these methods. This study comparatively evaluates unbiased approaches to reduce dimensionality as well as to summarize cell populations. To evaluate these different data-processing strategies, the prediction accuracies and the Z' factors of control compounds of a HCS cell cycle data set were monitored. As expected, dimension reduction led to a lower degree of discrimination between control samples. A high degree of classification accuracy was achieved when the cell population was summarized on well level using percentile values. As a conclusion, the generic data analysis pipeline described here enables a systematic review of alternative strategies to analyze multiparametric results from biological systems.

  18. Selective-plane illumination microscopy for high-content volumetric biological imaging

    Science.gov (United States)

    McGorty, Ryan; Huang, Bo

    2016-03-01

    Light-sheet microscopy, also named selective-plane illumination microscopy, enables optical sectioning with minimal light delivered to the sample. Therefore, it allows one to gather volumetric datasets of developing embryos and other light-sensitive samples over extended times. We have configured a light-sheet microscope that, unlike most previous designs, can image samples in formats compatible with high-content imaging. Our microscope can be used with multi-well plates or with microfluidic devices. In designing our optical system to accommodate these types of sample holders we encounter large optical aberrations. We counter these aberrations with both static optical components in the imaging path and with adaptive optics. Potential applications of this microscope include studying the development of a large number of embryos in parallel and over long times with subcellular resolution and doing high-throughput screens on organisms or cells where volumetric data is necessary.

  19. Performance of a commercial inoculum for the aerobic biodegradation of a high fat content dairy wastewater.

    Science.gov (United States)

    Loperena, Lyliam; Ferrari, Mario Daniel; Saravia, Verónica; Murro, Daiman; Lima, Cynthia; Ferrando, Lucía; Fernández, Ana; Lareo, Claudia

    2007-03-01

    The effectiveness of a commercial inoculum for degrading a dairy wastewater with high fat content was evaluated, and compared with an activated sludge inoculum from a dairy wastewater treatment pond. Both inocula reached similar chemical oxygen demand removal in batch experiments. The population dynamics was also studied by determining heterotrophic counts. Predominant microorganisms were differentiated by colony morphology and genomic fingerprinting (BOX-PCR) analysis. The higher population diversity and the wider range of CO2 production rate observed in batch reactors inoculated with activated-sludge, indicated that microorganisms from this inoculum were well adapted and may have had synergic activity for the degradation of the dairy effluent. When the bioreactor was operated with the commercial inoculum in continuous mode, according to its microbial growth kinetics, other microorganisms became predominant. These results showed that inoculated microorganisms did not persist in the open system and periodic addition of microorganisms may be needed to achieve a high performance treatment.

  20. Construction and validation of two metagenomic DNA libraries from Cerrado soil with high clay content.

    Science.gov (United States)

    de Castro, Alinne Pereira; Quirino, Betania Ferraz; Allen, Heather; Williamson, Lynn L; Handelsman, Jo; Krüger, Ricardo Henrique

    2011-11-01

    A challenge of metagenomic studies is in the extraction and purification of DNA from environmental samples. The soils of the Cerrado region of Brazil present several technical difficulties to DNA extraction: high clay content (>55% w/w), low pH (4.7) and high iron levels (146 ppm). Here we describe for the first time the efficient recovery and purification of microbial DNA associated with these unusual soil characteristics and the construction and validation of two metagenomic libraries: a 150,000 clones library with insert size of approximately 8 kb and a 65,000 clones library with insert size of approximately 35 kb. The construction of these metagenomic libraries will allow the biotechnological exploitation of the microbial community present in the soil from this endangered biome.

  1. High-Content Analysis of CRISPR-Cas9 Gene-Edited Human Embryonic Stem Cells.

    Science.gov (United States)

    Carlson-Stevermer, Jared; Goedland, Madelyn; Steyer, Benjamin; Movaghar, Arezoo; Lou, Meng; Kohlenberg, Lucille; Prestil, Ryan; Saha, Krishanu

    2016-01-12

    CRISPR-Cas9 gene editing of human cells and tissues holds much promise to advance medicine and biology, but standard editing methods require weeks to months of reagent preparation and selection where much or all of the initial edited samples are destroyed during analysis. ArrayEdit, a simple approach utilizing surface-modified multiwell plates containing one-pot transcribed single-guide RNAs, separates thousands of edited cell populations for automated, live, high-content imaging and analysis. The approach lowers the time and cost of gene editing and produces edited human embryonic stem cells at high efficiencies. Edited genes can be expressed in both pluripotent stem cells and differentiated cells. This preclinical platform adds important capabilities to observe editing and selection in situ within complex structures generated by human cells, ultimately enabling optical and other molecular perturbations in the editing workflow that could refine the specificity and versatility of gene editing.

  2. Salvinorin A content in legal high products of Salvia divinorum sold in Mexico.

    Science.gov (United States)

    Hernández-Bello, Rafael; García-Rodríguez, Rosa Virginia; García-Sosa, Karlina; Peña-Rodríguez, Luis Manuel; Vázquez-Hernández, Maribel; Ramos-Morales, Fernando Rafael; Corcoran, Olivia; Sánchez-Medina, Alberto

    2015-04-01

    Salvia divinorum (Lamiaceae) is a herb native to Mexico where it is used by Mazatec shamans for spiritual and divination purposes. S. divinorum products are easily available to consumers and are used worldwide as legal highs because of the hallucinogenic effects caused mainly by salvinorin A. Highly popular videos and websites on the internet depicting the use of S. divinorum products have contributed to an increase in their consumption. Recent reports have highlighted the potential of these products to induce psychosis in consumers. In Mexico, dried leaf extracts of S. divinorum are sold in different strengths, claiming to correlate with increasing amounts of salvinorin A. In order to determine the variability of salvinorin A content between brands and to investigate possible correlation between brand strengths, this study sought to quantify salvinorin A in commercial products available in Mexico using an HPLC method. The HPLC analytical method showed a correlation coefficient R(2)>0.99, with LOD of 0.44 μg/mL and LOQ of 1.34 μg/mL. The retention time for salvinorin A was 23.09±0.95 min and the measured concentrations ranged between 8.32±0.65 and 56.52±3.77 mg/g dried leaf. The results for brand c did not show an agreement between the declared and the calculated amount of salvinorin A. Additionally, the emergence in Mexico of high strength salvia products (100×), the lack of regulation and the observed variability of salvinorin A content between brands of commercial legal highs products of S. divinorum could result in a health problem for consumers.

  3. High-content analysis of sequential events during the early phase of influenza A virus infection.

    Science.gov (United States)

    Banerjee, Indranil; Yamauchi, Yohei; Helenius, Ari; Horvath, Peter

    2013-01-01

    Influenza A virus (IAV) represents a worldwide threat to public health by causing severe morbidity and mortality every year. Due to high mutation rate, new strains of IAV emerge frequently. These IAVs are often drug-resistant and require vaccine reformulation. A promising approach to circumvent this problem is to target host cell determinants crucial for IAV infection, but dispensable for the cell. Several RNAi-based screens have identified about one thousand cellular factors that promote IAV infection. However, systematic analyses to determine their specific functions are lacking. To address this issue, we developed quantitative, imaging-based assays to dissect seven consecutive steps in the early phases of IAV infection in tissue culture cells. The entry steps for which we developed the assays were: virus binding to the cell membrane, endocytosis, exposure to low pH in endocytic vacuoles, acid-activated fusion of viral envelope with the vacuolar membrane, nucleocapsid uncoating in the cytosol, nuclear import of viral ribonucleoproteins, and expression of the viral nucleoprotein. We adapted the assays to automated microscopy and optimized them for high-content screening. To quantify the image data, we performed both single and multi-parametric analyses, in combination with machine learning. By time-course experiments, we determined the optimal time points for each assay. Our quality control experiments showed that the assays were sufficiently robust for high-content analysis. The methods we describe in this study provide a powerful high-throughput platform to understand the host cell processes, which can eventually lead to the discovery of novel anti-pathogen strategies.

  4. Interaction genotype by season and its influence on the identification of beans with high content of zinc and iron

    Directory of Open Access Journals (Sweden)

    Camila Andrade Silva

    2012-01-01

    Full Text Available The mineral contents in common bean seeds are influenced, in addition to genetic variation, by environmental crop conditions, especially by the soil type and chemical composition and by the genotype x environment interaction. This study was carried out to verify if the zinc and iron contents are affected by the crop growing period. Ten lines with high iron and zinc contents and ten with low contents were assessed in three seasons: "wet season" of 2009/2010 (sowing in November; "dry season" of 2010 (sowing in February and "winter season" of 2010 (sowing in July, in Lavras, Minas Gerais State, Brazil. The experimental design used was randomized blocks with three replications and plots consisting of two rows of two meters, with a spacing of 0.50 m. The seeds harvested were assessed in regard to iron and zinc mineral contents. The greatest contents were observed in the winter season and the smallest ones in the dry season, with sowing in February. It was observed that in the mean of the three harvests, the lines classified as having high iron and zinc content exhibited an iron quantity 11.0% and a zinc quantity 6.8% above those of low content. The lines by seasons interaction occurs. However, its interference in identification of the groups with high and low content of the two nutrients is not great.

  5. Low Temperature Deposition of High-k/Metal Gate Stacks on High-Sn Content (Si)GeSn-Alloys.

    Science.gov (United States)

    Schulte-Braucks, C; von den Driesch, N; Glass, S; Tiedemann, A T; Breuer, U; Besmehn, A; Hartmann, J-M; Ikonic, Z; Zhao, Q T; Mantl, S; Buca, D

    2016-05-25

    (Si)GeSn is an emerging group IV alloy system offering new exciting properties, with great potential for low power electronics due to the fundamental direct band gap and prospects as high mobility material. In this Article, we present a systematic study of HfO2/TaN high-k/metal gate stacks on (Si)GeSn ternary alloys and low temperature processes for large scale integration of Sn based alloys. Our investigations indicate that SiGeSn ternaries show enhanced thermal stability compared to GeSn binaries, allowing the use of the existing Si technology. Despite the multielemental interface and large Sn content of up to 14 atom %, the HfO2/(Si)GeSn capacitors show small frequency dispersion and stretch-out. The formed TaN/HfO2/(Si)GeSn capacitors present a low leakage current of 2 × 10(-8) A/cm(2) at -1 V and a high breakdown field of ∼8 MV/cm. For large Sn content SiGeSn/GeSn direct band gap heterostructures, process temperatures below 350 °C are required for integration. We developed an atomic vapor deposition process for TaN metal gate on HfO2 high-k dielectric and validated it by resistivity as well as temperature and frequency dependent capacitance-voltage measurements of capacitors on SiGeSn and GeSn. The densities of interface traps are deduced to be in the low 10(12) cm(-2) eV(-1) range and do not depend on the Sn-concentration. The new processes developed here are compatible with (Si)GeSn integration in large scale applications.

  6. A multi-functional imaging approach to high-content protein interaction screening.

    Directory of Open Access Journals (Sweden)

    Daniel R Matthews

    Full Text Available Functional imaging can provide a level of quantification that is not possible in what might be termed traditional high-content screening. This is due to the fact that the current state-of-the-art high-content screening systems take the approach of scaling-up single cell assays, and are therefore based on essentially pictorial measures as assay indicators. Such phenotypic analyses have become extremely sophisticated, advancing screening enormously, but this approach can still be somewhat subjective. We describe the development, and validation, of a prototype high-content screening platform that combines steady-state fluorescence anisotropy imaging with fluorescence lifetime imaging (FLIM. This functional approach allows objective, quantitative screening of small molecule libraries in protein-protein interaction assays. We discuss the development of the instrumentation, the process by which information on fluorescence resonance energy transfer (FRET can be extracted from wide-field, acceptor fluorescence anisotropy imaging and cross-checking of this modality using lifetime imaging by time-correlated single-photon counting. Imaging of cells expressing protein constructs where eGFP and mRFP1 are linked with amino-acid chains of various lengths (7, 19 and 32 amino acids shows the two methodologies to be highly correlated. We validate our approach using a small-scale inhibitor screen of a Cdc42 FRET biosensor probe expressed in epidermoid cancer cells (A431 in a 96 microwell-plate format. We also show that acceptor fluorescence anisotropy can be used to measure variations in hetero-FRET in protein-protein interactions. We demonstrate this using a screen of inhibitors of internalization of the transmembrane receptor, CXCR4. These assays enable us to demonstrate all the capabilities of the instrument, image processing and analytical techniques that have been developed. Direct correlation between acceptor anisotropy and donor FLIM is observed for FRET

  7. High water contents in basaltic melt inclusions from Arenal volcano, Costa Rica

    Science.gov (United States)

    Wade, J. A.; Plank, T.; Hauri, E. H.; Melson, W. G.; Soto, G. J.

    2004-12-01

    Despite the importance of water to arc magma genesis, fractionation and eruption, few quantitative constraints exist on the water content of Arenal magmas. Early estimates, by electron microprobe sum deficit, suggested up to 4 wt% H2O in olivine-hosted basaltic andesite melt inclusions (MI) from pre-historic ET-6 tephra (Melson, 1982), and up to 7 wt% H2O in plagioclase and orthopyroxene-hosted dacitic MI from 1968 lapilli (Anderson, 1979). These high water contents are consistent with abundant hornblende phenocrysts in Arenal volcanics, but inconsistent with geochemical tracers such as 10Be and Ba/La that suggest a low flux of recycled material (and presumably water) from the subduction zone. In order to test these ideas, and provide the first direct measurements of water in mafic Arenal magmas, we have studied olivine-hosted MI from the prehistoric (900 yBP; Soto et al., 1998) ET3 tephra layer. MI range from andesitic (> 58% SiO2) to basaltic compositions ( 4 wt%) found here for Arenal basaltic MI support the semi-quantitative data from earlier studies, but are somewhat unexpected given predictions from slab tracers. Arenal water contents (4%) approach those of the 1995 eruption of Cerro Negro in Nicaragua (4-5 wt% in basaltic MI; Roggensack et al., 1997), despite the fact that the latter has Ba/La of > 100, while Arenal has Ba/La Boletin de Volcanologia; Roggensack et al. (1997) Science; Soto et al. (1998) OSIVAM; Williams-Jones et al. (2001) Journal of Volc. and Geoth. Res.

  8. Noble strain of Sparassis latifolia produces high content of β-glucan

    Institute of Scientific and Technical Information of China (English)

    Dong; Ju; Lee; Min; Cheol; Jang; A; Ra; Jo; Hyun; Jun; Choi; Kwang-Sang; Kim; Youn-Tae; Chi

    2015-01-01

    Objective: To classify four new Sparassis strains(CLM1, CKM1, CKM2, and KJM1) using the internal transcribed spacer sequence and to elucidate their β-glucan content and mycelial growth.Methods: Two different microbiological media were used to determine growth rate. The β-glucan contents were analyzed using the Megazyme Mushroom and Yeast Beta-Glucan kit. To determine the genetic relationships, phylogenetic trees were constructed using ClustalX. Multiple sequence alignments were printed and shaded with the BOXSHADE 3.21 program. Results: In this study, four new Sparassis strains were isolated from the southern region of the Korea Peninsula. They were all classified into the Sparassis latifolia clade as a monophyletic group based on the internal transcribed spacer sequence. Mycelial growth rate of the CLM1 strain was highest in potato dextrose agar and potato dextrose agar larch. The β-glucan content of the CLM1 strain was highest at 29.5%(w/w). A high degree of sequence divergence was detected in the RNA polymerase second largest subunit II gene(RPB2) within Sparassis spp. tested. The putative amino acid sequences of the RPB2 had a distinct sequence. The nucleotide sequences of the RPB2’s intron were also divergent among Sparassis spp., even though their nucleotide length was well conserved within Sparassis latifolia. Conclusions: These results indicate that the nucleotide sequences and the amino acid sequences of RPB2 can be used to identify individual Sparassis sp. The Sparassis strain CLM1 may be best for developing a remedy to prevent or treat cancer and other chronic diseases.

  9. Fat content increases the lethality of ultra-high-pressure homogenization on Listeria monocytogenes in milk.

    Science.gov (United States)

    Roig-Sagués, A X; Velázquez, R M; Montealegre-Agramont, P; López-Pedemonte, T J; Briñez-Zambrano, W J; Guamis-López, B; Hernandez-Herrero, M M

    2009-11-01

    Listeria monocytogenes CCUG 15526 was inoculated at a concentration of approximately 7.0 log(10) cfu/mL in milk samples with 0.3, 3.6, 10, and 15% fat contents. Milk samples with 0.3 and 3.6% fat content were also inoculated with a lower load of approximately 3.0 log(10) cfu/mL. Inoculated milk samples were subjected to a single cycle of ultra-high-pressure homogenization (UHPH) treatment at 200, 300, and 400 MPa. Microbiological analyses were performed 2 h after the UHPH treatments and after 5, 8, and 15 d of storage at 4 degrees C. Maximum lethality values were observed in samples treated at 400 MPa with 15 and 10% fat (7.95 and 7.46 log(10) cfu/mL), respectively. However, in skimmed and 3.6% fat milk samples, complete inactivation was not achieved and, during the subsequent 15 d of storage at 4 degrees C, L. monocytogenes was able to recover and replicate until achieving initial counts. In milk samples with 10 and 15% fat, L. monocytogenes recovered to the level of initial counts only in the milk samples treated at 200 MPa but not in the milk samples treated at 300 and 400 MPa. When the load of L. monocytogenes was approximately 3.0 log(10) cfu/mL in milk samples with 0.3 and 3.6% fat, complete inactivation was not achieved and L. monocytogenes was able to recover and grow during the subsequent cold storage. Fat content increased the maximum temperature reached during UHPH treatment; this could have contributed to the lethal effect achieved, but the amount of fat of the milk had a stronger effect than the temperature on obtaining a higher death rate of L. monocytogenes.

  10. High-resolution prediction of soil available water content within the crop root zone

    Science.gov (United States)

    Haghverdi, Amir; Leib, Brian G.; Washington-Allen, Robert A.; Ayers, Paul D.; Buschermohle, Michael J.

    2015-11-01

    A detailed understanding of soil hydraulic properties, particularly soil available water content (AWC) within the effective root zone, is needed to optimally schedule irrigation in fields with substantial spatial heterogeneity. However, it is difficult and time consuming to directly measure soil hydraulic properties. Therefore, easily collected and measured soil properties, such as soil texture and/or bulk density, that are well correlated with hydraulic properties are used as proxies to develop pedotransfer functions (PTF). In this study, multiple modeling scenarios were developed and evaluated to indirectly predict high resolution AWC maps within the effective root zone. The modeling techniques included kriging, co-kriging, regression kriging, artificial neural networks (NN) and geographically weighted regression (GWR). The efficiency of soil apparent electrical conductivity (ECa) as proximal data in the modeling process was assessed. There was a good agreement (root mean square error (RMSE) = 0.052 cm3 cm-3 and r = 0.88) between observed and point prediction of water contents using pseudo continuous PTFs. We found that both GWR (mean RMSE = 0.062 cm3 cm-3) and regression kriging (mean RMSE = 0.063 cm3 cm-3) produced the best water content maps with these accuracies improved up to 19% when ECa was used as an ancillary soil attribute in the interpolation process. The maps indicated fourfold differences in AWC between coarse- and fine-textured soils across the study site. This provided a template for future investigations for evaluating the efficiency of variable rate irrigation management scenarios in accounting for the spatial heterogeneity of soil hydraulic attributes.

  11. Auxiliary units for refining of high nitrogen content oils: Premium II refinery case

    Energy Technology Data Exchange (ETDEWEB)

    Nicolato, Paolo Contim; Pinotti, Rafael [Petroleo Brasileiro S.A. (PETROBRAS), Rio de Janeiro, RJ (Brazil)

    2012-07-01

    PETROBRAS is constantly investing on its refining park in order to increase the production of clean and stable fuels and to be capable to process heavier oils with high contaminants content. Sulfur and nitrogen are the main heteroatoms present in petroleum. They are responsible for some undesirable fuels properties like corrosivity and instability, and also emit pollutants when burnt. Hydrotreating and hydrocracking processes are designed to remove these contaminants and adjust other fuel properties, generating, as byproduct, sour gases and sour water streams rich in H{sub 2}S and NH{sub 3}, which are usually sent to Sour Water Treatment Units and Sulfur Recovery Units. The regeneration of the amine used for the light streams treatment, as fuel gas and LPG, also generates sour gas streams that must be also sent to Sulfur Recovery Units. As the ammonia content in the sour streams increases, some design parameters must be adjusted to avoid increasing the Refinery emissions. Sulfur Recovery Units must provide proper NH3 destruction. Sour Water Treatment must have a proper segregation between H{sub 2}S and ammonia streams, whenever desirable. Amine Regeneration Systems must have an efficient procedure to avoid the ammonia concentration in the amine solution. This paper presents some solutions usually applied to the Petroleum Industry and analyses some aspects related to Premium II Refinery Project and how its design will help the Brazilian refining park to meet future environmental regulation and market demands. (author)

  12. Live Broadcasting of High Definition Audiovisual Content Using HDTV over Broadband IP Networks

    Directory of Open Access Journals (Sweden)

    C. E. Vegiris

    2008-01-01

    Full Text Available The current paper focuses on validating an implementation of a state-of-the art audiovisual (AV technologies setup for live broadcasting of cultural shows, via broadband Internet. The main objective of the work was to study, configure, and setup dedicated audio-video equipment for the processes of capturing, processing, and transmission of extended resolution and high fidelity AV content in order to increase realism and achieve maximum audience sensation. Internet2 and GEANT broadband telecommunication networks were selected as the most applicable technology to deliver such traffic workloads. Validation procedures were conducted in combination with metric-based quality of service (QoS and quality of experience (QoE evaluation experiments for the quantification and the perceptual interpretation of the quality achieved during content reproduction. The implemented system was successfully applied in real-world applications, such as the transmission of cultural events from Thessaloniki Concert Hall throughout Greece as well as the reproduction of Philadelphia Orchestra performances (USA via Internet2 and GEANT backbones.

  13. Effect of ammonium concentration on alcoholic fermentation kinetics by wine yeasts for high sugar content.

    Science.gov (United States)

    Taillandier, Patricia; Ramon Portugal, Felipe; Fuster, André; Strehaiano, Pierre

    2007-02-01

    Kinetics of alcoholic fermentation by Saccharomyces cerevisiae wine strains in a synthetic medium with high sugar content were established for different nitrogen initial content and are presented for four strains. The composition of the medium was close to grape must except that the nitrogen source consisted mainly in ammonium and was varied from 120 to 290 mg N/l assimilable nitrogen. The overall nitrogen consumed was also estimated in order to determine nitrogen requirement variability. The effect of assimilable nitrogen was in general greater on sugar consumption rates than on growth and three kinds of effect on sugar consumption rates were observed: (i) existence of an optimal initial nitrogen level for a maximal sugar consumption rate (inhibition if excess), (ii) no effect of nitrogen beyond the intermediary level (saturation), (iii) sugar consumption rate proportional to the initial nitrogen level (activation). In all cases, the amount of consumed nitrogen increased with its initial concentration and so did the fructophilic capacity of the strains. The optimal requirement varied from 0.62 to 0.91 mg N/g of sugars according to different strains. There was no general correlation between the sugar assimilation rates and the nitrogen requirement.

  14. Fuel-N Evolution during the Pyrolysis of Industrial Biomass Wastes with High Nitrogen Content

    Directory of Open Access Journals (Sweden)

    Kunio Yoshikawa

    2012-12-01

    Full Text Available In this study, sewage sludge and mycelial waste from antibiotic production were pyrolyzed in a batch scale fixed-bed reactor as examples of two kinds of typical industrial biomass wastes with high nitrogen content. A series of experiments were conducted on the rapid pyrolysis and the slow pyrolysis of these wastes in the temperature range from 500–800 °C to investigate the Fuel-N transformation behavior among pyrolysis products. The results showed that Fuel-N conversion to Char-N intimately depended on the pyrolysis temperature and the yield of Char-N reduced with the increase of the pyrolysis temperature. Under the same pyrolysis conditions, Tar-N production mainly depended on complex properties of the different biomasses, including volatile matter, nitrogen content and biomass functional groups. HCN was the predominant NOx precursor in the rapid pyrolysis of biomass, whereas in the slow pyrolysis of mycelial waste, more NH3 was produced than HCN due to the additional NH3 formation through the hydrogenation reaction of Char-N, HCN and H radicals. At the same time, some part of the char was analyzed by Fourier Transform infrared spectroscopy (FTIR to get more information on the nitrogen functionality changes and the tar was also characterized by Gas Chromatography and Mass Spectrometry (GCMS to identify typical nitrogenous tar compounds. Finally, the whole nitrogen distribution in products was discussed.

  15. Processing and Characterization of High Density Polyethylene/Ethylene Vinyl Acetate Blends with Different VA Contents

    Directory of Open Access Journals (Sweden)

    Othman Y. Alothman

    2012-01-01

    Full Text Available Different series of high density Polyethylene/Ethylene Vinyl Acetate (HDPE/EVA blends were prepared via melt blending in a corotating intermeshing twin screw extruder. The effects of VA percentage and EVA loading ratio on the thermal, rheological viscoelastic, mechanical, and fracture toughness of the blends were analyzed. The results showed that the addition of EVA to HDPE reduces the thermal, elastic, and viscoelastic properties of the blends. The microscopic examination of the fracture surface confirmed the ductile fracture of HDPE/EVA blends for all blend ratios and VA percentages. Increasing the EVA ratio and VA content caused a significant reduction in the blend crystallinity but had no significant effect on melting temperature. The complex viscosity increased with increasing the percentage of EVA due to the restriction of molecular mobility and reduction of free volume, induced by the addition of EVA. The storage modulus decreased with increasing the EVA ratio and temperature, while it increased with increasing the frequency. Young’s modulus, yield strength, and fracture strain decreased with increasing the EVA ratio. Similarly, the fracture toughness decreased proportional to the EVA percentage. Finally the results indicated that the VA content has significant effects on the mechanical, thermal, and dynamic properties of HDPE/EVA blends.

  16. Protein adsorption of dialdehyde cellulose-crosslinked chitosan with high amino group contents.

    Science.gov (United States)

    Kim, Ung-Jin; Lee, Yeong Ro; Kang, Tong Ho; Choi, Joon Weon; Kimura, Satoshi; Wada, Masahisa

    2017-05-01

    Crosslinked chitosan was prepared by Schiff base formation between the aldehyde groups of dialdehyde cellulose (DAC) and the amino groups of chitosan and a subsequent reduction. DAC was obtained through periodate oxidation of cellulose and solubilization in hot water at 100°C for 1h. Three grades of DAC-crosslinked chitosan were prepared by adding various amounts DAC. The degrees of crosslinking as determined by amino group content were 3.8, 8.3, and 12.1%, respectively. DAC-crosslinked chitosan showed higher stability in the pH 2-9 range and no cytotoxicity was identified over the course of a 21-day long-term stability test. Also, DAC-crosslinked chitosan showed remarkably high bovine serum albumin (BSA) adsorption capacity at pH 5.5 as a result of the increased amino group content, due to the reaction between DAC and chitosan molecular chains occurring at multiple points even though DAC-crosslinked chitosan showed a lower degree of crosslinking.

  17. Quantitative characterization of mitosis-blocked tetraploid cells using high content analysis.

    Science.gov (United States)

    Grove, Linnette E; Ghosh, Richik N

    2006-08-01

    A range of cellular evidence supporting a G1 tetraploidy checkpoint was obtained from different assay methods including flow cytometry, immunoblotting, and microscopy. Cancer research would benefit if these cellular properties could instead be measured by a single, quantitative, automated assay method, such as high content analysis (HCA). Thus, nocodazole-treated cells were fluorescently labeled for different cell cycle-associated properties, including DNA content, retinoblastoma (Rb) and histone H3 phosphorylation, p53 and p21(WAF1) expression, nuclear and cell sizes, and cell morphology, and automatically imaged, analyzed, and correlated using HCA. HCA verified that nocodazole-induced mitosis block resulted in tetraploid cells. Rb and histone H3 were maximally hyperphosphorylated by 24 h of nocodazole treatment, accompanied by cell and nuclear size decreases and cellular rounding. Cells remained tetraploid and mononucleated with longer treatments, but other targets reverted to G1 levels, including Rb and histone H3 dephosphorylation accompanied by cellular respreading. This was accompanied by increased p53 and p21(WAF1) expression levels. The range of effects accompanying nocodazole-induced block of mitosis and the resulting tetraploid cells' reversal to a pseudo-G1 state can be quantitatively measured by HCA in an automated manner, recommending this assay method for the large-scale biology challenges of modern cancer drug discovery.

  18. Covalent Triazine-Based Frameworks with Ultramicropores and High Nitrogen Contents for Highly Selective CO2 Capture.

    Science.gov (United States)

    Wang, Keke; Huang, Hongliang; Liu, Dahuan; Wang, Chang; Li, Jinping; Zhong, Chongli

    2016-05-03

    Porous organic frameworks (POFs) are a class of porous materials composed of organic precursors linked by covalent bonds. The objective of this work is to develop POFs with both ultramicropores and high nitrogen contents for CO2 capture. Specifically, two covalent triazine-based frameworks (CTFs) with ultramicropores (pores of width capture CO2 due to ultramicroporous nature. Especially, CTF-FUM-350 has the highest nitrogen content (27.64%) and thus the highest CO2 adsorption capacity (57.2 cc/g at 298 K) and selectivities for CO2 over N2 and CH4 (102.4 and 20.5 at 298 K, respectively) among all CTF-FUM and CTF-DCN. More impressively, as far as we know, the CO2/CH4 selectivity is larger than that of all reported CTFs and ranks in top 10 among all reported POFs. Dynamic breakthrough curves indicate that both CTFs could indeed separate gas mixtures of CO2/N2 and CO2/CH4 completely.

  19. Effect of enzyme activity on the starch structure and processing quality of selected rice varieties

    Science.gov (United States)

    Although most commercialized long grain rice varieties have intermediate amylose content (~22%), high amylose (>25%) varieties are important for the canning and parboiling industry. Research has shown that high amylose rice varieties that have the best processing quality have high setback and low br...

  20. Analysis of Information Content in High-Spectral Resolution Sounders using Subset Selection Analysis

    Science.gov (United States)

    Velez-Reyes, Miguel; Joiner, Joanna

    1998-01-01

    In this paper, we summarize the results of the sensitivity analysis and data reduction carried out to determine the information content of AIRS and IASI channels. The analysis and data reduction was based on the use of subset selection techniques developed in the linear algebra and statistical community to study linear dependencies in high dimensional data sets. We applied the subset selection method to study dependency among channels by studying the dependency among their weighting functions. Also, we applied the technique to study the information provided by the different levels in which the atmosphere is discretized for retrievals and analysis. Results from the method correlate well with intuition in many respects and point out to possible modifications for band selection in sensor design and number and location of levels in the analysis process.

  1. THE CRYSTALLIZATION OF POTASSIUM GERMANATE GLASS WITH HIGH CONTENT OF NIOBIUM OXIDE

    Directory of Open Access Journals (Sweden)

    SRĐAN D.MATIJAŠEVIĆ

    2012-03-01

    Full Text Available Potassium germanate glass with molar ratio [GeO2]/[K2O] = 1.2 and Nb2O5 content of 34 mol% have been synthesized by a melt-quenching method. The crystallization behavior under non-isothermal and isothermal crystallization conditions was investigated. The results showed that this glass exposed complex primary crystallization. In the temperature range 800 °C. K10Nb22Ge4O68 and metastable KNbO3 and K4Nb6O17 were formed as secondary phases. The crystallization commenced at T > 640 °C with high homogeneous nucleation rate and spherulite crystal growth morphology. DTA curves recorded for powder samples particle size 0.1 mm showed two exothermic peaks and two endothermic peaks within temperature range of T = 640-1020 °C. The analysis of the dominant crystallization mechanism of powder glass sample and kinetics of crystallization is presented.

  2. Bench-scale synthesis of zeolite A from subbituminous coal ashes with high crystalline silica content

    Energy Technology Data Exchange (ETDEWEB)

    Chareonpanich, M.; Jullaphan, O.; Tang, C. [Kasetsart University, Bangkok (Thailand). Dept. of Chemical Engineering

    2011-01-15

    In this present work, fly ash and bottom ash with high crystalline silica content were obtained from the coal-fired boilers within the paper industries in Thailand. These coal ashes were used as the basic raw materials for synthetic zeolite production. The crystal type and crystallinity, specific surface area and pore size, and textural properties of zeolite products were characterized by using X-ray diffraction spectroscopy (XRD), N{sub 2} sorption analysis, and Scanning Electron Microscopy (SEM), respectively. It was found that sodalite octahydrate was selectively formed via the direct conventional (one-step) synthesis, whereas through a two-step, sodium silicate preparation and consecutive zeolite A synthesis process, 94 and 72 wt.% zeolite A products could be produced from the fly ash and bottom ash, respectively. The cation-exchange capacity (CEC) of fly ash and bottom ash-derived zeolite A products were closely similar to that of the commercial grade zeolite A.

  3. Process modules for GeSn nanoelectronics with high Sn-contents

    Science.gov (United States)

    Schulte-Braucks, C.; Glass, S.; Hofmann, E.; Stange, D.; von den Driesch, N.; Hartmann, J. M.; Ikonic, Z.; Zhao, Q. T.; Buca, D.; Mantl, S.

    2017-02-01

    This paper systematically studies GeSn n-FETs, from individual process modules to a complete device. High-k gate stacks and NiGeSn metallic contacts for source and drain are characterized in independent experiments. To study both direct and indirect bandgap semiconductors, a range of 0-14.5 at.% Sn-content GeSn alloys are investigated. Special emphasis is placed on capacitance-voltage (C-V) characteristics and Schottky-barrier optimization. GeSn n-FET devices are presented including temperature dependent I-V characteristics. Finally, as an important step towards implementing GeSn in tunnel-FETs, negative differential resistance in Ge0.87Sn0.13 tunnel-diodes is demonstrated at cryogenic temperatures. The present work provides a base for further optimization of GeSn FETs and novel tunnel FET devices.

  4. High solids content, soap-free, film-forming latexes stabilized by laponite clay platelets.

    Science.gov (United States)

    Bourgeat-Lami, Elodie; Guimarães, Thiago Rodrigues; Pereira, Ana Maria Cenacchi; Alves, Gizelda Maria; Moreira, José Carlos; Putaux, Jean-Luc; Dos Santos, Amilton Martins

    2010-11-01

    High solids content film-forming poly[styrene-co-(n-butyl acrylate)] [poly(Sty-co-BuA)] latexes armored with Laponite clay platelets have been synthesized by soap-free emulsion copolymerization of styrene and n-butyl acrylate. The polymerizations were performed in batch in the presence of Laponite and a methyl ether acrylate-terminated poly(ethylene glycol) macromonomer in order to promote polymer/clay association. The overall polymerization kinetics showed a pronounced effect of clay on nucleation and stabilization of the latex particles. Cryo-transmission electron microscopy observation confirmed the armored morphology and indicated that the majority of Laponite platelets were located at the particle surface. The resulting nanostructured films displayed enhanced mechanical properties.

  5. Colloidal processing of Fe-based metal ceramic composites with high content of ceramic reinforcement

    Energy Technology Data Exchange (ETDEWEB)

    Escribano, J. A.; Ferrari, B.; Alvaredo, P.; Gordo, E.; Sanchez-Herencia, A. J.

    2013-07-01

    Major difficulties of processing metal-matrix composites by means of conventional powder metallurgy techniques are the lack of dispersion of the phases within the final microstructure. In this work, processing through colloidal techniques of the Fe-based metal-matrix composites, with a high content of a ceramic reinforcement (Ti(C,N) ), is presented for the first time in the literature. The colloidal approach allows a higher control of the powders packing and a better homogenization of phases since powders are mixed in a liquid medium. The chemical stability of Fe in aqueous medium determines the dispersion conditions of the mixture. The Fe slurries were formulated by optimising their zeta potential and their rheology, in order to shape bulk pieces by slip-casting. Preliminary results demonstrate the viability of this procedure, also opening new paths to the microstructural design of fully sintered Fe-based hard metal, with 50 vol. % of Ti(C,N) in its composition. (Author)

  6. tranSMART: An Open Source Knowledge Management and High Content Data Analytics Platform.

    Science.gov (United States)

    Scheufele, Elisabeth; Aronzon, Dina; Coopersmith, Robert; McDuffie, Michael T; Kapoor, Manish; Uhrich, Christopher A; Avitabile, Jean E; Liu, Jinlei; Housman, Dan; Palchuk, Matvey B

    2014-01-01

    The tranSMART knowledge management and high-content analysis platform is a flexible software framework featuring novel research capabilities. It enables analysis of integrated data for the purposes of hypothesis generation, hypothesis validation, and cohort discovery in translational research. tranSMART bridges the prolific world of basic science and clinical practice data at the point of care by merging multiple types of data from disparate sources into a common environment. The application supports data harmonization and integration with analytical pipelines. The application code was released into the open source community in January 2012, with 32 instances in operation. tranSMART's extensible data model and corresponding data integration processes, rapid data analysis features, and open source nature make it an indispensable tool in translational or clinical research.

  7. Organosilica hybrid nanomaterials with a high organic content: syntheses and applications of silsesquioxanes

    KAUST Repository

    Croissant, Jonas G.

    2016-11-07

    Organic-inorganic hybrid materials garner properties from their organic and inorganic matrices as well as synergistic features, and therefore have recently attracted much attention at the nanoscale. Non-porous organosilica hybrid nanomaterials with a high organic content such as silsesquioxanes (R-SiO, with R organic groups) and bridged silsesquioxanes (OSi-R-SiO) are especially attractive hybrids since they provide 20 to 80 weight percent of organic functional groups in addition to the known chemistry and stability of silica. In the organosilica family, silsesquioxanes (R-SiO) stand between silicas (SiO) and silicones (RSiO), and are variously called organosilicas, ormosil (organically-modified silica), polysilsesquioxanes and silica hybrids. Herein, we comprehensively review non-porous silsesquioxane and bridged silsesquioxane nanomaterials and their applications in nanomedicine, electro-optics, and catalysis.

  8. Subfamily logos: visualization of sequence deviations at alignment positions with high information content

    Directory of Open Access Journals (Sweden)

    Beitz Eric

    2006-06-01

    Full Text Available Abstract Background Recognition of relevant sequence deviations can be valuable for elucidating functional differences between protein subfamilies. Interesting residues at highly conserved positions can then be mutated and experimentally analyzed. However, identification of such sites is tedious because automated approaches are scarce. Results Subfamily logos visualize subfamily-specific sequence deviations. The display is similar to classical sequence logos but extends into the negative range. Positive, upright characters correspond to residues which are characteristic for the subfamily, negative, upside-down characters to residues typical for the remaining sequences. The symbol height is adjusted to the information content of the alignment position. Residues which are conserved throughout do not appear. Conclusion Subfamily logos provide an intuitive display of relevant sequence deviations. The method has proven to be valid using a set of 135 aligned aquaporin sequences in which established subfamily-specific positions were readily identified by the algorithm.

  9. MALDI-TOF MS for quality control of high protein content sport supplements.

    Science.gov (United States)

    De Ceglie, Cristina; Calvano, Cosima D; Zambonin, Carlo G

    2015-06-01

    High protein content sport nutritional supplements are found as powder products containing, as ingredients, amino acids and proteins with important nutritional values as milk, soy and egg proteins. An EU Food Supplements Directive (2002) requires that supplements should be safe, both in dosages and in purity. It is important, then, to develop rapid and sensitive methods to be employed for the quality control of these substances. In this work, we apply, for the first time, matrix-assisted laser desorption ionization-mass spectrometry as a fast, reproducible and sensitive method for the quality control of sport nutritional supplements based on proteins. To this aim, several commercial egg- and/or milk-based powder products have been processed by in gel or in solution digestion and analyzed in comparison to pure standard products. This strategy allowed to assess the reliability of the indications on proteins (as caseins, whey proteins and ovalbumin) declared in the label of several sport nutritional supplements.

  10. High Stellar FUV/NUV Ratio and Oxygen Contents in the Atmospheres of Potentially Habitable Planets

    CERN Document Server

    Tian, Feng; Linsky, Jeffrey L; Mauas, Pablo J D; Vieytes, Mariela C

    2013-01-01

    Recent observations of several planet-hosting M dwarfs show that most have FUV/NUV flux ratios 1000 times greater than that of the Sun. Here we show that the atmospheric oxygen contents (O2 and O3) of potentially habitable planets in this type of UV environment could be 2~3 orders of magnitude greater than those of their counterparts around Sun-like stars as a result of decreased photolysis of O3, H2O2, and HO2. Thus detectable levels of atmospheric oxygen, in combination with the existence of H2O and CO2, may not be the most promising biosignatures on planets around stars with high FUV/NUV ratios such as the observed M dwarfs.

  11. Understanding a High School Physics Teacher's Pedagogical Content Knowledge of Argumentation

    Science.gov (United States)

    Wang, Jianlan; Buck, Gayle A.

    2016-08-01

    Scientific argumentation is an important learning objective in science education. It is also an effective instructional approach to constructivist science learning. The implementation of argumentation in school settings requires science teachers, who are pivotal agents of transforming classroom practices, to develop sophisticated knowledge of argumentation. However, there is a lack of understanding about science teachers' knowledge of argumentation, especially the dialogic meaning of argumentation. In this case study, we closely examine a high school physics teacher's argumentation-related pedagogic content knowledge (PCK) in the context of dialogic argumentation. We synthesize the teacher's performed PCK from his argumentation practices and narrated PCK from his reflection on the argumentation practices, from which we summarize his PCK of argumentation from the perspectives of orientation, instructional strategies, students, curriculum, and assessment. Finally, we describe the teacher's perception and adaption of argumentation in his class. We also identity the barriers to argumentation implementation in this particular case and suggest solutions to overcome these barriers.

  12. High content screening for G protein-coupled receptors using cell-based protein translocation assays

    DEFF Research Database (Denmark)

    Grånäs, Charlotta; Lundholt, Betina Kerstin; Heydorn, Arne

    2005-01-01

    G protein-coupled receptors (GPCRs) have been one of the most productive classes of drug targets for several decades, and new technologies for GPCR-based discovery promise to keep this field active for years to come. While molecular screens for GPCR receptor agonist- and antagonist-based drugs...... as valuable discovery tools for several years. The application of high content cell-based screening to GPCR discovery has opened up additional possibilities, such as direct tracking of GPCRs, G proteins and other signaling pathway components using intracellular translocation assays. These assays provide...... the capability to probe GPCR function at the cellular level with better resolution than has previously been possible, and offer practical strategies for more definitive selectivity evaluation and counter-screening in the early stages of drug discovery. The potential of cell-based translocation assays for GPCR...

  13. Modeling of Flow Stress of High Titanium Content 6061 Aluminum Alloy Under Hot Compression

    Science.gov (United States)

    Chen, Wei; Guan, Yingping; Wang, Zhenhua

    2016-09-01

    Hot compression tests were performed on high titanium content 6061 aluminum alloy (AA 6061-Ti) using a Gleeble-3500 thermomechanical testing system at temperatures from 350 to 510 °C with a constant strain rate in the range of 0.001-10 s-1. Three types of flow stress models were established from the experimental stress-strain curves, the correlation coefficient ( R), mean absolute relative error ( MARE), and root mean square deviation ( RMSD) between the predicted data and the experimental data were also calculated. The results show that the Fields-Backofen model, which includes a softening factor, was the simplest mathematical expression with a level of precision appropriate for the numerical simulations. However, the Arrhenius and artificial neural network (ANN) models were also consistent with the experimental results but they are more limited in their application in terms of their accuracy and the mathematical expression of the models.

  14. Doping of GaN{sub 1-x}As{sub x} with high As content

    Energy Technology Data Exchange (ETDEWEB)

    Levander, A.X.; Novikov, S.V.; Liliental-Weber, Z.; dos Reis, R.; Dubon, O.D.; Wu, J.; Foxon, C.T.; Yu, K.M.; Walukiewicz, W.

    2011-09-22

    Recent work has shown that GaN{sub 1-x}As{sub x} can be grown across the entire composition range by low temperature molecular beam epitaxy with intermediate compositions being amorphous, but control of the electrical properties through doping is critical for functionalizing this material. Here we report the bipolar doping of GaN{sub 1-x}As{sub x} with high As content to conductivities above 4 S/cm at room temperature using Mg or Te. The carrier type was confirmed by thermopower measurements. Doping requires an increase in Ga flux during growth resulting in a mixed phase material of polycrystalline GaAs:N embedded in amorphous GaN{sub 1-x}As{sub x}.

  15. Skin-effect down hole electric heater for heavy oil and high wax content oil applications

    Energy Technology Data Exchange (ETDEWEB)

    Zhu, Chenglin; Wang, Hui; Liu, Yanhua [Liaoning Huafu Petroleum High-Tech Co., Ltd. (China); Xiao, Jon H; Klotz, Eric [ANDMIR Environmental Group Canada Inc. (Canada)

    2011-07-01

    With the increased production of oil and the depletion of conventional reserves, operators have started to exploit heavy oil and high wax content oil. Adequate production of such oils is difficult to achieve due to viscosity increase and mobility decrease during lifting as a result of heat loss. The down-hole electric heater has been developed to resolve these issues with the application of skin-effect electric heating technology. The aim of this paper is to present how this technology improves the production of heavy oil and waxy oil. Applications of the technology to wells in Chinese oilfields are studied. Results proved the technology to be efficient while being based on a simple process and operating in an easy and safe manner. This paper showed that the down-hole electric heater is a breakthrough technology, resolving the issues encountered in the heavy oil and waxy oil exploitation field, with broad application prospects.

  16. Characterization of SPAD Array for Multifocal High-Content Screening Applications

    Directory of Open Access Journals (Sweden)

    Anthony Tsikouras

    2016-10-01

    Full Text Available Current instruments used to detect specific protein-protein interactions in live cells for applications in high-content screening (HCS are limited by the time required to measure the lifetime. Here, a 32 × 1 single-photon avalanche diode (SPAD array was explored as a detector for fluorescence lifetime imaging (FLIM in HCS. Device parameters and characterization results were interpreted in the context of the application to determine if the SPAD array could satisfy the requirements of HCS-FLIM. Fluorescence lifetime measurements were performed using a known fluorescence standard; and the recovered fluorescence lifetime matched literature reported values. The design of a theoretical 32 × 32 SPAD array was also considered as a detector for a multi-point confocal scanning microscope.

  17. Amylose-potassium oleate inclusion complex in plain set-style yogurt.

    Science.gov (United States)

    Singh, Mukti; Byars, Jeffrey A; Kenar, James A

    2014-05-01

    Health and wellness aspirations of U.S. consumers continue to drive the demand for lower fat from inherently beneficial foods such as yogurt. Removing fat from yogurt negatively affects the gel strength, texture, syneresis, and storage of yogurt. Amylose-potassium oleate inclusion complexes (AIC) were used to replace skim milk solids to improve the quality of nonfat yogurt. The effect of AIC on fermentation of yogurt mix and strength of yogurt gel was studied and compared to full-fat samples. Texture, storage modulus, and syneresis of yogurt were observed over 4 weeks of storage at 4 °C. Yogurt mixes having the skim milk solids partially replaced by AIC fermented at a similar rate as yogurt samples with no milk solids replaced and full-fat milk. Initial viscosity was higher for yogurt mixes with AIC. The presence of 3% AIC strengthened the yogurt gel as indicated by texture and rheology measurements. Yogurt samples with 3% AIC maintained the gel strength during storage and resulted in low syneresis after storage for 4 wk.

  18. Effects of Leached Amylose and Amylopectin in Rice Cooking Liquidon Texture and Structure of Cooked Rice

    Directory of Open Access Journals (Sweden)

    Liu Yang

    Full Text Available ABSTRACT Effects of leached amylose (AM and amylopectin (AP on textural and morphological properties of cooked rice were investigated separately by replacing cooking liquid with AM and AP separated from pouring cooking liquid. The pouring of cooking water reduced the hardness (from 28.45 to 19.42N and stickiness (from 1.74 to 1.19N·s significantly. However, the addition of AM and AP enhanced the hardness (27.63N and stickiness (1.71N·s.Scanning electron microscopy show that the leached short-chain AM entered the surface hollows in the cooked rice after water evaporation. Meanwhile, the Long-chain AM cross-linked to formed a three-dimensional network structures, which covered on the filled hollows. This distribution led to a harder texture of cooked rice. The leached AP absorbed water and swelledto form masses. Atthe gelatinization temperature,theAPmassesagglomeratedtoformafilmlayer,whichcoveredtheunevenstructure, the thicker and smoother film contributed to the sticky texture.

  19. Identifying Content Knowledge for Teaching Energy: Examples from High School Physics

    Science.gov (United States)

    Robertson, Amy D.; Scherr, Rachel E.; Goodhew, Lisa M.; Daane, Abigail R.; Gray, Kara E.; Aker, Leanna B.

    2017-01-01

    "Content knowledge for teaching" is the specialized content knowledge that teachers use in practice the content knowledge that serves them for tasks of teaching such as revoicing students' ideas, choosing an instructional activity to address a student misunderstanding, and evaluating student statements. We describe a methodology for…

  20. Identifying Content Knowledge for Teaching Energy: Examples from High School Physics

    Science.gov (United States)

    Robertson, Amy D.; Scherr, Rachel E.; Goodhew, Lisa M.; Daane, Abigail R.; Gray, Kara E.; Aker, Leanna B.

    2017-01-01

    "Content knowledge for teaching" is the specialized content knowledge that teachers use in practice the content knowledge that serves them for tasks of teaching such as revoicing students' ideas, choosing an instructional activity to address a student misunderstanding, and evaluating student statements. We describe a methodology for…

  1. Solar activity variability in the IRI at high latitudes: Comparisons with GPS total electron content

    Science.gov (United States)

    Themens, David R.; Jayachandran, P. T.

    2016-04-01

    Total electron content (TEC) measurements from 10 dual-frequency GPS receivers in the Canadian High Arctic Ionospheric Network (CHAIN) are used to evaluate the performance of International Reference Ionosphere (IRI)-2007 within the Canadian sector. Throughout the region, we see systematic underestimation of daytime TEC, particularly at solar maximum, where summer and equinox root-mean-square errors reach as high as 14 total electron content units, 1 TECU = 1016 el m-2 (TECU). It is also shown that the use of a monthly IG index, in place of the IRI's standard IG12 index, leads to an improvement in TEC specification by up to 3 TECU in the polar cap and up to 6 TECU in the subauroral region during periods of short-term, large amplitude changes in solar activity. On diurnal timescales, variability in TEC is found to be underestimated by the IRI, during equinox periods, by up to 40% at subauroral latitudes and up to 70% in the polar cap region. During the winter, diurnal variations are overestimated by up to 40% in the subauroral region and are underestimated within the polar cap by up to 80%. Using collocated ionosonde data, we find IRI bottomside TEC to be within 1 TECU of observation with errors largest during the equinoxes. For the topside we find good agreement during the winter but significant underestimation of topside TEC by the IRI during summer and equinox periods, exceeding 6 TECU at times. By ingesting measured NmF2 into the IRI, we show that the topside thickness parameterization is the source of the bulk of the observed TEC errors.

  2. High-throughput retrotransposon-based fluorescent markers: improved information content and allele discrimination

    Directory of Open Access Journals (Sweden)

    Baker David

    2009-07-01

    Full Text Available Abstract Background Dense genetic maps, together with the efficiency and accuracy of their construction, are integral to genetic studies and marker assisted selection for plant breeding. High-throughput multiplex markers that are robust and reproducible can contribute to both efficiency and accuracy. Multiplex markers are often dominant and so have low information content, this coupled with the pressure to find alternatives to radio-labelling, has led us to adapt the SSAP (sequence specific amplified polymorphism marker method from a 33P labelling procedure to fluorescently tagged markers analysed from an automated ABI 3730 xl platform. This method is illustrated for multiplexed SSAP markers based on retrotransposon insertions of pea and is applicable for the rapid and efficient generation of markers from genomes where repetitive element sequence information is available for primer design. We cross-reference SSAP markers previously generated using the 33P manual PAGE system to fluorescent peaks, and use these high-throughput fluorescent SSAP markers for further genetic studies in Pisum. Results The optimal conditions for the fluorescent-labelling method used a triplex set of primers in the PCR. These included a fluorescently labelled specific primer together with its unlabelled counterpart, plus an adapter-based primer with two bases of selection on the 3' end. The introduction of the unlabelled specific primer helped to optimise the fluorescent signal across the range of fragment sizes expected, and eliminated the need for extensive dilutions of PCR amplicons. The software (GeneMarker Version 1.6 used for the high-throughput data analysis provided an assessment of amplicon size in nucleotides, peak areas and fluorescence intensity in a table format, so providing additional information content for each marker. The method has been tested in a small-scale study with 12 pea accessions resulting in 467 polymorphic fluorescent SSAP markers of which

  3. Terahertz-dependent evaluation of water content in high-water-cut crude oil using additive-manufactured samplers

    Science.gov (United States)

    Guan, LiMei; Zhan, HongLei; Miao, XinYang; Zhu, Jing; Zhao, Kun

    2017-04-01

    The evaluation of water content in crude oil is of significance to petroleum exploration and transportation. Terahertz (THz) waves are sensitive to fluctuations in the dipole moment of water. However, due to the strong absorption of water in the THz range, it is difficult for the THz spectrum to determine high water content with the common sampler. In this research, micron-grade samplers for THz detection were designed and manufactured using additive manufacturing (AM) technology. Oil-water mixtures with water content from 1.8% to 90.6% were measured with the THz-TDS system using sample cells. In addition, a detailed analysis was performed of the relationships among THz parameters such as signal peak, time delay, and refractive index as well as absorption coefficient and high water content (>60%). Results suggest that the combination of THz spectroscopy and AM technique is effective for water content evaluation in crude oil and can be further applied in the petroleum industry.

  4. Terahertz-dependent evaluation of water content in high-water-cut crude oil using additive-manufactured samplers

    Science.gov (United States)

    Guan, LiMei; Zhan, HongLei; Miao, XinYang; Zhu, Jing; Zhao, Kun

    2017-04-01

    The evaluation of water content in crude oil is of significance to petroleum exploration and transportation. Terahertz (THz) waves are sensitive to fluctuations in the dipole moment of water. However, due to the strong absorption of water in the THz range, it is difficult for the THz spectrum to determine high water content with the common sampler. In this research, micron-grade samplers for THz detection were designed and manufactured using additive manufacturing (AM) technology. Oil-water mixtures with water content from 1.8% to 90.6% were measured with the THz-TDS system using sample cells. In addition, a detailed analysis was performed of the relationships among THz parameters such as signal peak, time delay, and refractive index as well as absorption coefficient and high water content (>60%). Results suggest that the combination of THz spectroscopy and AM technique is effective for water content evaluation in crude oil and can be further applied in the petroleum industry.

  5. High temperature ultralow water content carbon dioxide-in-water foam stabilized with viscoelastic zwitterionic surfactants.

    Science.gov (United States)

    Alzobaidi, Shehab; Da, Chang; Tran, Vu; Prodanović, Maša; Johnston, Keith P

    2017-02-15

    Ultralow water content carbon dioxide-in-water (C/W) foams with gas phase volume fractions (ϕ) above 0.95 (that is foams may be stabilized with viscoelastic aqueous phases formed with a single zwitterionic surfactant at a concentration of only 1% (w/v) in DI water and over a wide range of salinity. Moreover, they are stable with a foam quality ϕ up to 0.98 even for temperatures up to 120°C. The properties of aqueous viscoelastic solutions and foams containing these solutions are examined for a series of zwitterionic amidopropylcarbobetaines, R-ONHC3H6N(CH3)2CH2CO2, where R is varied from C12-14 (coco) to C18 (oleyl) to C22 (erucyl). For the surfactants with long C18 and C22 tails, the relaxation times from complex rheology indicate the presence of viscoelastic wormlike micelles over a wide range in salinity and pH, given the high surfactant packing fraction. The apparent viscosities of these ultralow water content foams reached more than 120cP with stabilities more than 30-fold over those for foams formed with the non-viscoelastic C12-14 surfactant. At 90°C, the foam morphology was composed of ∼35μm diameter bubbles with a polyhedral texture. The apparent foam viscosity typically increased with ϕ and then dropped at ϕ values higher than 0.95-0.98. The Ostwald ripening rate was slower for foams with viscoelastic versus non-viscoelastic lamellae as shown by optical microscopy, as a consequence of slower lamellar drainage rates. The ability to achieve high stabilities for ultralow water content C/W foams over a wide temperature range is of interest in various technologies including polymer and materials science, CO2 enhanced oil recovery, CO2 sequestration (by greater control of the CO2 flow patterns), and possibly even hydraulic fracturing with minimal use of water to reduce the requirements for wastewater disposal.

  6. Spatial variability in the soil water content of a Mediterranean agroforestry system with high soil heterogeneity

    Science.gov (United States)

    Molina, Antonio Jaime; Llorens, Pilar; Aranda, Xavier; Savé, Robert; Biel, Carmen

    2013-04-01

    Variability of soil water content is known to increase with the size of spatial domain in which measurements are taken. At field scale, heterogeneity in soil, vegetation, topography, water input volume and management affects, among other factors, hydrologic plot behaviour under different mean soil water contents. The present work studies how the spatial variability of soil water content (SWC) is affected by soil type (texture, percentage of stones and the combination of them) in a timber-orientated plantation of cherry tree (Prunus avium) under Mediterranean climatic conditions. The experimental design is a randomized block one with 3 blocks * 4 treatments, based on two factors: irrigation (6 plots irrigated versus 6 plots not irrigated) and soil management (6 plots tillaged versus 6 plots not tillaged). SWC is continuously measured at 25, 50 and 100 cm depth with FDR sensors, located at two positions in each treatment: under tree influence and 2.5 m apart. This study presents the results of the monitoring during 2012 of the 24 sensors located at the 25 cm depth. In each of the measurement point, texture and percentage of stones were measured. Sandy-loam, sandy-clay-loam and loam textures were found together with a percentage of stones ranging from 20 to 70 %. The results indicated that the relationship between the daily mean SWC and its standard deviation, a common procedure used to study spatial variability, changed with texture, percentage of stones and the estimation of field capacity from the combination of both. Temporal stability analysis of SWC showed a clear pattern related to field capacity, with the measurement points of the sandy-loam texture and the high percentage of stones showing the maximun negative diference with the global mean. The high range in the mean relative difference observed (± 75 %), could indicate that the studied plot may be considered as a good field-laboratory to extrapolate results at higher spatial scales. Furthermore, the

  7. Cultivation Methods for Tomato (Lycopersicon esculentum Mill.) with High Soluble Solids Content Using the Vertically Split Root System

    National Research Council Canada - National Science Library

    HAYASHI, Hiroyuki; TOYOFUKU, Kyoko; TAGUCHI, Takiko; OGAWA, Atsushi

    2014-01-01

    For the cultivation of tomatoes with high soluble solids content, the root system was split vertically and irrigation to the upper part of the root system was stopped to create split vertically (SR treatment...

  8. BioSig3D: High Content Screening of Three-Dimensional Cell Culture Models: e0148379

    National Research Council Canada - National Science Library

    Cemal Cagatay Bilgin; Gerald Fontenay; Qingsu Cheng; Hang Chang; Ju Han; Bahram Parvin

    2016-01-01

    ...) cell culture models that are imaged in full 3D volume. It provides an end-to-end solution for designing high content screening assays, based on colony organization that is derived from segmentation of nuclei in each colony...

  9. High nitrogen supply and carbohydrate content reduce fungal endophyte and alkaloid concentration in Lolium perenne.

    Science.gov (United States)

    Rasmussen, Susanne; Parsons, Anthony J; Bassett, Shalome; Christensen, Michael J; Hume, David E; Johnson, Linda J; Johnson, Richard D; Simpson, Wayne R; Stacke, Christina; Voisey, Christine R; Xue, Hong; Newman, Jonathan A

    2007-01-01

    The relationship between cool-season grasses and fungal endophytes is widely regarded as mutualistic, but there is growing uncertainty about whether changes in resource supply and environment benefit both organisms to a similar extent. Here, we infected two perennial ryegrass (Lolium perenne) cultivars (AberDove, Fennema) that differ in carbohydrate content with three strains of Neotyphodium lolii (AR1, AR37, common strain) that differ intrinsically in alkaloid profile. We grew endophyte-free and infected plants under high and low nitrogen (N) supply and used quantitative PCR (qPCR) to estimate endophyte concentrations in harvested leaf tissues. Endophyte concentration was reduced by 40% under high N supply, and by 50% in the higher sugar cultivar. These two effects were additive (together resulting in 75% reduction). Alkaloid production was also reduced under both increased N supply and high sugar cultivar, and for three of the four alkaloids quantified, concentrations were linearly related to endophyte concentration. The results stress the need for wider quantification of fungal endophytes in the grassland-foliar endophyte context, and have implications for how introducing new cultivars, novel endophytes or increasing N inputs affect the role of endophytes in grassland ecosystems.

  10. Halophilic properties of metal binding protein characterized by high histidine content from Chromohalobacter salexigens DSM3043.

    Science.gov (United States)

    Yamaguchi, Rui; Arakawa, Tsutomu; Tokunaga, Hiroko; Ishibashi, Matsujiro; Tokunaga, Masao

    2012-02-01

    Periplasmic metal binding protein characterized by high histidine content was cloned from moderate halophile, Chromohalobacter salexigens. The protein, termed histidine-rich metal binding protein (HP), was expressed in and purified from E. coli as a native form. HP bound to Ni- and Cu-loaded chelate columns with high affinity, and Co- and Zn-columns with moderate affinity. Although the secondary structure was not grossly altered by the addition of 0.2-2.0 M NaCl, the thermal transition pattern was considerably shifted to higher temperature with increasing salt concentration: melting temperature was raised by ~20 °C at 2.0 M NaCl over the melting temperature at 0.2 M NaCl. HP showed reversible refolding from thermal melting in 0.2-1.15 M NaCl, while it formed irreversible aggregates upon thermal melting at 2 M NaCl. Addition of 0.01-0.1 mM NiSO₄ stabilized HP against thermal melting with high reversibility, while addition above 0.5 mM resulted in irreversible melting due to aggregation.

  11. Development and freeze-thaw durability of high flyash-content concrete

    Energy Technology Data Exchange (ETDEWEB)

    Sajadi, J.

    1987-01-01

    Objectives were to investigate the effects on concrete strength, drying shrinkage, freeze-thaw durability, and air-void system parameters of replacing various amounts of portland cement with different types of fly ash and to compare selected characteristics of such fly-ash concretes and fly-ash concretes containing a high-range water-reducing admixture to those of a control mixture. It was concluded that concrete mixtures with 90-day compressive strengths equal to the control could be produced when large amounts of cement were replaced by fly ash. In addition, when the high-range water-reducing admixtures was employed, very large amounts of cement could be replaced by fly ash to yield mixtures whose compressive strengths were equal to or greater than the strengths of the control mix at all ages. The maximum amount of cement that could be replaced for equal-strength mixtures depended upon the nature of the fly ash. Drying shrinkage of plain fly-ash concretes and fly-ash concretes containing the high-range water-reducing admixture were similar to those of the control mix. The optimum fly-ash content in a concrete is comparable in strength and durability to a conventional (control) concrete was influenced by the chemical and physical characteristics of the fly ash.

  12. Evaluation of Mechanical Properties According to Nb Content of High Strength Steel Manufactured in VIM

    Institute of Scientific and Technical Information of China (English)

    Byung-Hui Choi; Byung-Ki Choi

    2008-01-01

    As the aircraft and aerospace industry and the automobile industry are developed, the demand of reliable materials with high strength and high toughness is steadily increased. The grain miniature method which improves the ductility and the toughness simultaneously under high strength is the miniature of the casting microstructure. In this paper, the Nb which affects the austenite grain miniature is added by 0.00%, 0.03% and 0.06% in this steel and the ingot is manufactured in a vacuum induction melting furnace (VIM). The castingmi crostructure and the mechanical property of the maraging steel according to Nb contents are analyzed by conducting the solution annealing and the age hardening after hot rolling. In this result, a specimen containing 0.03% Nb is most miniature. When it does the long time age hardening, the precipitation estimated as the carbide is appeared. The mechanical properties are excellent if a specimen containing 0.06% Nb does the age hardening during 8 h in 482℃.

  13. Predicting In Vivo Anti-Hepatofibrotic Drug Efficacy Based on In Vitro High-Content Analysis

    Science.gov (United States)

    Zheng, Baixue; Tan, Looling; Mo, Xuejun; Yu, Weimiao; Wang, Yan; Tucker-Kellogg, Lisa; Welsch, Roy E.; So, Peter T. C.; Yu, Hanry

    2011-01-01

    Background/Aims Many anti-fibrotic drugs with high in vitro efficacies fail to produce significant effects in vivo. The aim of this work is to use a statistical approach to design a numerical predictor that correlates better with in vivo outcomes. Methods High-content analysis (HCA) was performed with 49 drugs on hepatic stellate cells (HSCs) LX-2 stained with 10 fibrotic markers. ∼0.3 billion feature values from all cells in >150,000 images were quantified to reflect the drug effects. A systematic literature search on the in vivo effects of all 49 drugs on hepatofibrotic rats yields 28 papers with histological scores. The in vivo and in vitro datasets were used to compute a single efficacy predictor (Epredict). Results We used in vivo data from one context (CCl4 rats with drug treatments) to optimize the computation of Epredict. This optimized relationship was independently validated using in vivo data from two different contexts (treatment of DMN rats and prevention of CCl4 induction). A linear in vitro-in vivo correlation was consistently observed in all the three contexts. We used Epredict values to cluster drugs according to efficacy; and found that high-efficacy drugs tended to target proliferation, apoptosis and contractility of HSCs. Conclusions The Epredict statistic, based on a prioritized combination of in vitro features, provides a better correlation between in vitro and in vivo drug response than any of the traditional in vitro markers considered. PMID:22073152

  14. Solution-Processable Organic Molecule for High-Performance Organic Solar Cells with Low Acceptor Content.

    Science.gov (United States)

    Wang, Kun; Guo, Bing; Xu, Zhuo; Guo, Xia; Zhang, Maojie; Li, Yongfang

    2015-11-11

    A new planar D2-A-D1-A-D2 structured organic molecule with bithienyl benzodithiophene (BDT) as central donor unit D1 and fluorine-substituted benzothiadiazole (BTF) as acceptor unit and alkyl-dithiophene as end group and donor unit D2, BDT-BTF, was designed and synthesized for the application as donor material in organic solar cells (OSCs). BDT-BTF shows a broad absorption in visible region, suitable highest occupied molecular orbital energy level of -5.20 eV, and high hole mobility of 1.07 × 10(-2) cm(2)/(V s), benefitted from its high coplanarity and strong crystallinity. The OSCs based on BDT-BTF as donor (D) and PC71BM as acceptor (A) at a D/A weight ratio of 3:1 without any extra treatment exhibit high photovoltaic performance with Voc of 0.85 V, Jsc of 10.48 mA/cm(2), FF of 0.66, and PCE of 5.88%. The morphological study by transmission electron microscopy reveals that the blend of BDT-BTF and PC71BM (3:1, w/w) possesses an appropriate interpenetrating D/A network for the exciton separation and charge carrier transport, which agrees well with the good device performance. The optimized D/A weight ratio of 3:1 is the lowest acceptor content in the active layer reported so far for the high-performance OSCs, and the organic molecules with the molecular structure like BDT-BTF could be promising high-performance donor materials in solution-processable OSCs.

  15. NeuriteQuant: An open source toolkit for high content screens of neuronal Morphogenesis

    Directory of Open Access Journals (Sweden)

    Hwang Eric

    2011-10-01

    Full Text Available Abstract Background To date, some of the most useful and physiologically relevant neuronal cell culture systems, such as high density co-cultures of astrocytes and primary hippocampal neurons, or differentiated stem cell-derived cultures, are characterized by high cell density and partially overlapping cellular structures. Efficient analytical strategies are required to enable rapid, reliable, quantitative analysis of neuronal morphology in these valuable model systems. Results Here we present the development and validation of a novel bioinformatics pipeline called NeuriteQuant. This tool enables fully automated morphological analysis of large-scale image data from neuronal cultures or brain sections that display a high degree of complexity and overlap of neuronal outgrowths. It also provides an efficient web-based tool to review and evaluate the analysis process. In addition to its built-in functionality, NeuriteQuant can be readily extended based on the rich toolset offered by ImageJ and its associated community of developers. As proof of concept we performed automated screens for modulators of neuronal development in cultures of primary neurons and neuronally differentiated P19 stem cells, which demonstrated specific dose-dependent effects on neuronal morphology. Conclusions NeuriteQuant is a freely available open-source tool for the automated analysis and effective review of large-scale high-content screens. It is especially well suited to quantify the effect of experimental manipulations on physiologically relevant neuronal cultures or brain sections that display a high degree of complexity and overlap among neurites or other cellular structures.

  16. [Effects of high temperature on Bt protein content and nitrogen metabolic physiology in boll wall of Bt cotton].

    Science.gov (United States)

    Wang, Jun; Abidallah, Eltayib H M A; Hua, Ming-ming; Heng, Li; Lyu, Chun-hua; Chen, De-hua

    2015-10-01

    Bt cotton cultivar Sikang 1 (a conventional cultivar) and Sikang 3 (a hybrid cultivar) from China, and 99B (a conventional cultivar) and Daiza 1 (a hybrid cultivar) from USA were selected as experimental materials, the ball wall Bt protein content and nitrogen metabolic physiology were investigated under different high temperature levels at peak boll stage. The results showed that the Bt protein content of boll wall decreased with the increasing temperature. Compared with the control (32 °C, the boll wall Bt protein content decreased significantly when the temperature was above 38 °C for the conventional cultivars and above 40 °C for the hybrid cultivars. The Bt protein contents of cultivar Sikang 1 and 99B decreased by 53.0% and 69.5% respectively with the temperature at 38 °C, and that of cultivar Sikang 3 and Daiza 1 decreased by 64.8% and 54.1% respectively with the temperature at 40 °C. Greater reductions in the boll wall soluble protein contents and GPT activities, larger increments for the boll wall free amino acid contents and proteinsase activities were also observed when the boll wall Bt protein content was significantly reduced. Therefore, high temperature resulted in the reduction of Bt protein synthesis and increase of the insecticidal protein degradation in the boll wall significantly, which caused the reductions in boll wall Bt protein content and insect resistance.

  17. Association mapping of grain hardness, polyphenol oxidase, total phenolics, amylose content, and ß-glucan in US barley breeding germplasm

    Science.gov (United States)

    A renewed interest in breeding barley specifically for food end-uses is being driven by increased consumer interest in healthier foods. We conducted association mapping on physicochemical properties of barley that play a role in food quality and processing including, grain hardness, polyphenol oxid...

  18. Wild plants as tools for the remediation of abandoned mining sites with a high arsenic content

    Science.gov (United States)

    Martínez-Lopez, Salvadora; Martínez-Sanchez, MJose; Perez-Sirvent, Carmen; Martínez, Lucia B.; Bech, Jaume

    2014-05-01

    The aim of this study was to assess the environmental risk posed by arsenic when new vegetation types are introduced, analyzing the transfer of arsenic in different plant species that grow spontaneously in mining areas of SE Spain (Sierra Minera of Cartagena), and the contribution of such plants to the environmental risk represented by their ingestion by animals living in the same ecosystems. When dealing with remediation projects in zones affected by mining activities, the risk posed by the ingestion of the plants by fauna is often forgotten. To study the transfer to the trophic chain, two mammals, sheep and vole, were selected. The risk analysis was centered in the contribution of these natural plants to the ingestion calculated. For this study, 21 vegetal species naturally growing in the soils were collected from the Sierra Minera. The vegetal material studied is clearly associated with the Mediterranean Region (S.E. of Spain) and the plant species collected are endemisms and plants characteristic of the zone. Physico-chemical properties were obtained by means of the usual procedures. To determine the arsenic content, the soil samples and plant materials were digested in a microwave system and the arsenic concentration was determined using atomic fluorescence spectrometry with an automated continuous flow hydride generation system. A semiquantitative estimation of the mineralogical composition of the samples was made by X Ray Diffraction analysis. The soils were classified into three groups: Low (group 1) (7-35 mg/kg) medium (group 2) (35-327 mg/kg) and high (group 3) (> 327 mg/kg), according to their As content. The mineralogy and As content of the soils studied depends on the materials related with mining activity. The descriptive statistical analysis of the population of plants studied showed the As range in roots to be 0.31-150 mg/kg while leaf concentrations were lower (0.21-83.4 mg/kg). The potential risk of As entering the food chain through of the plant

  19. Aromatic claw: A new fold with high aromatic content that evades structural prediction.

    Science.gov (United States)

    Sachleben, Joseph R; Adhikari, Aashish N; Gawlak, Grzegorz; Hoey, Robert J; Liu, Gaohua; Joachimiak, Andrzej; Montelione, Gaetano T; Sosnick, Tobin R; Koide, Shohei

    2017-02-01

    We determined the NMR structure of a highly aromatic (13%) protein of unknown function, Aq1974 from Aquifex aeolicus (PDB ID: 5SYQ). The unusual sequence of this protein has a tryptophan content five times the normal (six tryptophan residues of 114 or 5.2% while the average tryptophan content is 1.0%) with the tryptophans occurring in a WXW motif. It has no detectable sequence homology with known protein structures. Although its NMR spectrum suggested that the protein was rich in β-sheet, upon resonance assignment and solution structure determination, the protein was found to be primarily α-helical with a small two-stranded β-sheet with a novel fold that we have termed an Aromatic Claw. As this fold was previously unknown and the sequence unique, we submitted the sequence to CASP10 as a target for blind structural prediction. At the end of the competition, the sequence was classified a hard template based model; the structural relationship between the template and the experimental structure was small and the predictions all failed to predict the structure. CSRosetta was found to predict the secondary structure and its packing; however, it was found that there was little correlation between CSRosetta score and the RMSD between the CSRosetta structure and the NMR determined one. This work demonstrates that even in relatively small proteins, we do not yet have the capacity to accurately predict the fold for all primary sequences. The experimental discovery of new folds helps guide the improvement of structural prediction methods.

  20. The high-ion content and kinematics of low-redshift Lyman limit systems

    Energy Technology Data Exchange (ETDEWEB)

    Fox, Andrew J.; Tumlinson, Jason; Bordoloi, Rongmon [Space Telescope Science Institute, 3700 San Martin Drive, Baltimore, MD 21218 (United States); Lehner, Nicolas; Howk, J. Christopher [Department of Physics, University of Notre Dame, 225 Nieuwland Science Hall, Notre Dame, IN 46556 (United States); Tripp, Todd M.; Katz, Neal [Department of Astronomy, University of Massachusetts, Amherst, MA 01003 (United States); Prochaska, J. Xavier; Werk, Jessica K. [UCO/Lick Observatory, University of California, Santa Cruz, CA 95064 (United States); O' Meara, John M. [Department of Physics, Saint Michael' s College, One Winooski Park, Colchester, VT 05439 (United States); Oppenheimer, Benjamin D. [Leiden Observatory, Leiden University, NL-2300 RA Leiden (Netherlands); Davé, Romeel, E-mail: afox@stsci.edu [University of the Western Cape, Robert Sobukwe Road, Bellville 7535 (South Africa)

    2013-12-01

    We study the high-ion content and kinematics of the circumgalactic medium around low-redshift galaxies using a sample of 23 Lyman limit systems (LLSs) at 0.08 < z < 0.93 observed with the Cosmic Origins Spectrograph on board the Hubble Space Telescope. In Lehner et al., we recently showed that low-z LLSs have a bimodal metallicity distribution. Here we extend that analysis to search for differences between the high-ion and kinematic properties of the metal-poor and metal-rich branches. We find that metal-rich LLSs tend to show higher O VI columns and broader O VI profiles than metal-poor LLSs. The total H I line width (Δv {sub 90} statistic) in LLSs is not correlated with metallicity, indicating that the H I kinematics alone cannot be used to distinguish inflow from outflow and gas recycling. Among the 17 LLSs with O VI detections, all but two show evidence of kinematic sub-structure, in the form of O VI-H I centroid offsets, multiple components, or both. Using various scenarios for how the metallicities in the high-ion and low-ion phases of each LLS compare, we constrain the ionized hydrogen column in the O VI phase to lie in the range log N(H II) ∼ 17.6-20. The O VI phase of LLSs is a substantial baryon reservoir, with M(high-ion) ∼ 10{sup 8.5-10.9} (r/150 kpc){sup 2} M {sub ☉}, similar to the mass in the low-ion phase. Accounting for the O VI phase approximately doubles the contribution of low-z LLSs to the cosmic baryon budget.

  1. Evidence for high fluid/melt content beneath Krakatau volcano (Indonesia) from local earthquake tomography

    Science.gov (United States)

    Jaxybulatov, Kairly; Koulakov, Ivan; Seht, Malte Ibs-von; Klinge, Klaus; Reichert, Christian; Dahren, Börje; Troll, Valentin R.

    2011-09-01

    Within the KRAKMON project for multiparameter monitoring of Anak Krakatau volcano (Indonesia), a network of temporary stations was installed on the islands of the Krakatau complex as well as in the surrounding areas of the Sunda Strait, Sumatra and Java. The network was operated from June 2005 until January 2006. More than 700 local events were recorded during this experiment, and travel times from these events were used to perform a tomographic inversion for P and S velocities and for the Vp/Vs ratio. In this study, special attention was paid to the validation of the computed model based on different tests, such as inversion of independent data subsets and synthetic modeling. Although the network configuration and the distribution of the events are not favorable for high-quality tomographic imaging, we have obtained some important and robust features which give information about sources of volcanic activity in the Krakatau complex. The most interesting feature of this study is a zone of high Vp/Vs ratio beneath the Krakatau complex. At depths down to 4 km depth we observe anticorrelation of higher P- and lower S-velocities that leads to Vp/Vs ratio higher than 2. This is a probable indicator of the presence of partially molten and/or with high fluid content material with a composition corresponding to deeper layers. It is important that the anomaly of high Vp/Vs ratio beneath the Krakatau complex appears to be separated in two parts at a depth of 5-6 km. This fits to results of geobarometric analysis that presume the existence of several levels of magma chambers beneath Anak Krakatau.

  2. Effect of Simulated High Hydrogen Content Combustion Environments on Abradable Properties of Ceramic Turbine Coatings

    Science.gov (United States)

    Basu Majumder, Madhura

    Air plasma sprayed (APS) abradable coatings are used in the turbine hot section to reduce the stator-rotor gap, minimizing gas leakage. These coatings are designed to exhibit controlled removal of material in thin layers when the turbine blades sweep through the coating, which protects the mechanical integrity of the turbine blade. In an effort to lower CO2 emissions, high H2 content fuel is being explored. This change in chemical composition of the fuel may affect the microstructure, abradability and durability of the coatings at turbine operational temperatures. The presence of high water vapor in the combustion chamber leads to accelerated degradation of the sacrificial coating materials. In this work, zirconia based composite materials with a machinable phase and varied porosity have been used to study microstructural evolution, thermal and chemical stability of the phases and abradable characteristics of baseline coating systems in both humid and dry environments. Investigation of the mechanisms that control the removal of materials and performance of abradable coatings through thermo-mechanical tests will be discussed.

  3. Teachable, high-content analytics for live-cell, phase contrast movies.

    Science.gov (United States)

    Alworth, Samuel V; Watanabe, Hirotada; Lee, James S J

    2010-09-01

    CL-Quant is a new solution platform for broad, high-content, live-cell image analysis. Powered by novel machine learning technologies and teach-by-example interfaces, CL-Quant provides a platform for the rapid development and application of scalable, high-performance, and fully automated analytics for a broad range of live-cell microscopy imaging applications, including label-free phase contrast imaging. The authors used CL-Quant to teach off-the-shelf universal analytics, called standard recipes, for cell proliferation, wound healing, cell counting, and cell motility assays using phase contrast movies collected on the BioStation CT and BioStation IM platforms. Similar to application modules, standard recipes are intended to work robustly across a wide range of imaging conditions without requiring customization by the end user. The authors validated the performance of the standard recipes by comparing their performance with truth created manually, or by custom analytics optimized for each individual movie (and therefore yielding the best possible result for the image), and validated by independent review. The validation data show that the standard recipes' performance is comparable with the validated truth with low variation. The data validate that the CL-Quant standard recipes can provide robust results without customization for live-cell assays in broad cell types and laboratory settings.

  4. Toward high-content screening of mitochondrial morphology and membrane potential in living cells.

    Science.gov (United States)

    Iannetti, Eligio F; Willems, Peter H G M; Pellegrini, Mina; Beyrath, Julien; Smeitink, Jan A M; Blanchet, Lionel; Koopman, Werner J H

    2015-06-01

    Mitochondria are double membrane organelles involved in various key cellular processes. Governed by dedicated protein machinery, mitochondria move and continuously fuse and divide. These "mitochondrial dynamics" are bi-directionally linked to mitochondrial and cell functional state in space and time. Due to the action of the electron transport chain (ETC), the mitochondrial inner membrane displays a inside-negative membrane potential (Δψ). The latter is considered a functional readout of mitochondrial "health" and required to sustain normal mitochondrial ATP production and mitochondrial fusion. During the last decade, live-cell microscopy strategies were developed for simultaneous quantification of Δψ and mitochondrial morphology. This revealed that ETC dysfunction, changes in Δψ and aberrations in mitochondrial structure often occur in parallel, suggesting they are linked potential targets for therapeutic intervention. Here we discuss how combining high-content and high-throughput strategies can be used for analysis of genetic and/or drug-induced effects at the level of individual organelles, cells and cell populations. This article is part of a Directed Issue entitled: Energy Metabolism Disorders and Therapies.

  5. Multiplexed high-content analysis of mitochondrial morphofunction using live-cell microscopy.

    Science.gov (United States)

    Iannetti, Eligio F; Smeitink, Jan A M; Beyrath, Julien; Willems, Peter H G M; Koopman, Werner J H

    2016-09-01

    Mitochondria have a central role in cellular (patho)physiology, and they display a highly variable morphology that is probably coupled to their functional state. Here we present a protocol that allows unbiased and automated quantification of mitochondrial 'morphofunction' (i.e., morphology and membrane potential), cellular parameters (size, confluence) and nuclear parameters (number, morphology) in intact living primary human skin fibroblasts (PHSFs). Cells are cultured in 96-well plates and stained with tetramethyl rhodamine methyl ester (TMRM), calcein-AM (acetoxy-methyl ester) and Hoechst 33258. Next, multispectral fluorescence images are acquired using automated microscopy and processed to extract 44 descriptors. Subsequently, the descriptor data are subjected to a quality control (QC) algorithm based upon principal component analysis (PCA) and interpreted using univariate, bivariate and multivariate analysis. The protocol requires a time investment of ∼4 h distributed over 2 d. Although it is specifically developed for PHSFs, which are widely used in preclinical research, the protocol is portable to other cell types and can be scaled up for implementation in high-content screening.

  6. Designs and concept reliance of a fully automated high-content screening platform.

    Science.gov (United States)

    Radu, Constantin; Adrar, Hosna Sana; Alamir, Ab; Hatherley, Ian; Trinh, Trung; Djaballah, Hakim

    2012-10-01

    High-content screening (HCS) is becoming an accepted platform in academic and industry screening labs and does require slightly different logistics for execution. To automate our stand-alone HCS microscopes, namely, an alpha IN Cell Analyzer 3000 (INCA3000), originally a Praelux unit hooked to a Hudson Plate Crane with a maximum capacity of 50 plates per run, and the IN Cell Analyzer 2000 (INCA2000), in which up to 320 plates could be fed per run using the Thermo Fisher Scientific Orbitor, we opted for a 4 m linear track system harboring both microscopes, plate washer, bulk dispensers, and a high-capacity incubator allowing us to perform both live and fixed cell-based assays while accessing both microscopes on deck. Considerations in design were given to the integration of the alpha INCA3000, a new gripper concept to access the onboard nest, and peripheral locations on deck to ensure a self-reliant system capable of achieving higher throughput. The resulting system, referred to as Hestia, has been fully operational since the new year, has an onboard capacity of 504 plates, and harbors the only fully automated alpha INCA3000 unit in the world.

  7. Ethanol production from food waste at high solids content with vacuum recovery technology.

    Science.gov (United States)

    Huang, Haibo; Qureshi, Nasib; Chen, Ming-Hsu; Liu, Wei; Singh, Vijay

    2015-03-18

    Ethanol production from food wastes does not only solve environmental issues but also provides renewable biofuels. This study investigated the feasibility of producing ethanol from food wastes at high solids content (35%, w/w). A vacuum recovery system was developed and applied to remove ethanol from fermentation broth to reduce yeast ethanol inhibition. A high concentration of ethanol (144 g/L) was produced by the conventional fermentation of food waste without a vacuum recovery system. When the vacuum recovery is applied to the fermentation process, the ethanol concentration in the fermentation broth was controlled below 100 g/L, thus reducing yeast ethanol inhibition. At the end of the conventional fermentation, the residual glucose in the fermentation broth was 5.7 g/L, indicating incomplete utilization of glucose, while the vacuum fermentation allowed for complete utilization of glucose. The ethanol yield for the vacuum fermentation was found to be 358 g/kg of food waste (dry basis), higher than that for the conventional fermentation at 327 g/kg of food waste (dry basis).

  8. Laser-based single-axon transection for high-content axon injury and regeneration studies.

    Directory of Open Access Journals (Sweden)

    Darío Kunik

    Full Text Available The investigation of the regenerative response of the neurons to axonal injury is essential to the development of new axoprotective therapies. Here we study the retinal neuronal RGC-5 cell line after laser transection, demonstrating that the ability of these cells to initiate a regenerative response correlates with axon length and cell motility after injury. We show that low energy picosecond laser pulses can achieve transection of unlabeled single axons in vitro and precisely induce damage with micron precision. We established the conditions to achieve axon transection, and characterized RGC-5 axon regeneration and cell body response using time-lapse microscopy. We developed an algorithm to analyze cell trajectories and established correlations between cell motility after injury, axon length, and the initiation of the regeneration response. The characterization of the motile response of axotomized RGC-5 cells showed that cells that were capable of repair or regrowth of damaged axons migrated more slowly than cells that could not. Moreover, we established that RGC-5 cells with long axons could not recover their injured axons, and such cells were much more motile. The platform we describe allows highly controlled axonal damage with subcellular resolution and the performance of high-content screening in cell cultures.

  9. High-Content Analysis of Breast Cancer Using Single-Cell Deep Transfer Learning.

    Science.gov (United States)

    Kandaswamy, Chetak; Silva, Luís M; Alexandre, Luís A; Santos, Jorge M

    2016-03-01

    High-content analysis has revolutionized cancer drug discovery by identifying substances that alter the phenotype of a cell, which prevents tumor growth and metastasis. The high-resolution biofluorescence images from assays allow precise quantitative measures enabling the distinction of small molecules of a host cell from a tumor. In this work, we are particularly interested in the application of deep neural networks (DNNs), a cutting-edge machine learning method, to the classification of compounds in chemical mechanisms of action (MOAs). Compound classification has been performed using image-based profiling methods sometimes combined with feature reduction methods such as principal component analysis or factor analysis. In this article, we map the input features of each cell to a particular MOA class without using any treatment-level profiles or feature reduction methods. To the best of our knowledge, this is the first application of DNN in this domain, leveraging single-cell information. Furthermore, we use deep transfer learning (DTL) to alleviate the intensive and computational demanding effort of searching the huge parameter's space of a DNN. Results show that using this approach, we obtain a 30% speedup and a 2% accuracy improvement.

  10. High-content analysis to leverage a robust phenotypic profiling approach to vascular modulation.

    Science.gov (United States)

    Isherwood, Beverley J; Walls, Rebecca E; Roberts, Mark E; Houslay, Thomas M; Brave, Sandra R; Barry, Simon T; Carragher, Neil O

    2013-12-01

    Phenotypic screening seeks to identify substances that modulate phenotypes in a desired manner with the aim of progressing first-in-class agents. Successful campaigns require physiological relevance, robust screening, and an ability to deconvolute perturbed pathways. High-content analysis (HCA) is increasingly used in cell biology and offers one approach to prosecution of phenotypic screens, but challenges exist in exploitation where data generated are high volume and complex. We combine development of an organotypic model with novel HCA tools to map phenotypic responses to pharmacological perturbations. We describe implementation for angiogenesis, a process that has long been a focus for therapeutic intervention but has lacked robust models that recapitulate more completely mechanisms involved. The study used human primary endothelial cells in co-culture with stromal fibroblasts to model multiple aspects of angiogenic signaling: cell interactions, proliferation, migration, and differentiation. Multiple quantitative descriptors were derived from automated microscopy using custom-designed algorithms. Data were extracted using a bespoke informatics platform that integrates processing, statistics, and feature display into a streamlined workflow for building and interrogating fingerprints. Ninety compounds were characterized, defining mode of action by phenotype. Our approach for assessing phenotypic outcomes in complex assay models is robust and capable of supporting a range of phenotypic screens at scale.

  11. Combination of Sardine and Shark Oil High Content of Omega-3 and Squalene

    Directory of Open Access Journals (Sweden)

    Muhamad Musbah

    2017-05-01

    Full Text Available Sardine oil contain high concentration of  EPA but low of  DHA while shark is reverse. Shark oil  high contain of DHA and squalene but low EPA. This research aim to fortify the quality of  fish oil withomega-3 and squalen and improve the quality of fish oil. The combination of fish oil (sardine:shark 1: 1, 1: 2, 1: 3, 1: 4, 2: 1, 3: 1 and 4:1 showed significant results on peroxide, anisidine, and total oxidation value, however free fatty acids analysis did not show the influence to the content value.  The best oxidation parameters value werefound (sardine: shark (1:4 with peroxide was 5.44±0.06 mEq/kg, anisidine was 8.3±0.72 mEq/kg and total oxidation was 19.27±0.7mEq/kg. Fatty acids profile between  sardines and shark oil containedvarious SFA, MUFA and PUFA. Sardine oil which was added more to combination ratio will increase omega-3. Sample 1:4 had 43.16% squalene.

  12. GPS scintillations and total electron content climatology in the southern low, middle and high latitude regions

    Directory of Open Access Journals (Sweden)

    Luca Spogli

    2013-06-01

    Full Text Available In recent years, several groups have installed high-frequency sampling receivers in the southern middle and high latitude regions, to monitor ionospheric scintillations and the total electron content (TEC changes. Taking advantage of the archive of continuous and systematic observations of the ionosphere on L-band by means of signals from the Global Positioning System (GPS, we present the first attempt at ionospheric scintillation and TEC mapping from Latin America to Antarctica. The climatology of the area considered is derived through Ground-Based Scintillation Climatology, a method that can identify ionospheric sectors in which scintillations are more likely to occur. This study also introduces the novel ionospheric scintillation 'hot-spot' analysis. This analysis first identifies the crucial areas of the ionosphere in terms of enhanced probability of scintillation occurrence, and then it studies the seasonal variation of the main scintillation and TEC-related parameters. The results produced by this sophisticated analysis give significant indications of the spatial/ temporal recurrences of plasma irregularities, which contributes to the extending of current knowledge of the mechanisms that cause scintillations, and consequently to the development of efficient tools to forecast space-weather-related ionospheric events.

  13. Activated carbon fibers with a high heteroatom content by chemical activation of PBO with phosphoric acid.

    Science.gov (United States)

    Vázquez-Santos, M B; Suárez-García, F; Martínez-Alonso, A; Tascón, J M D

    2012-04-03

    The preparation of activated carbon fibers (ACFs) by phosphoric acid activation of poly(p-phenylene benzobisoxazole) (PBO) fibers was studied, with particular attention to the effects of impregnation ratio and carbonization temperature on porous texture. Phosphoric acid has a strong effect on PBO degradation, lowering the temperature range at which the decomposition takes place and changing the number of mass loss steps. Chemical analysis results indicated that activation with phosphoric acid increases the concentration of oxygenated surface groups; the resulting materials also exhibiting high nitrogen content. ACFs are obtained with extremely high yields; they have well-developed porosity restricted to the micropore and narrow mesopore range and with a significant concentration of phosphorus incorporated homogeneously in the form of functional groups. An increase in the impregnation ratio leads to increases in both pore volume and pore size, maximum values of surface area (1250 m(2)/g) and total pore volume (0.67 cm(3)/g) being attained at the highest impregnation ratio (210 wt % H(3)PO(4)) and lowest activation temperature (650 °C) used; the corresponding yield was as large as 83 wt %. The obtained surface areas and pore volumes were higher than those achieved in previous works by physical activation with CO(2) of PBO chars.

  14. High amylose resistant starch diet ameliorates oxidative stress, inflammation, and progression of chronic kidney disease (CKD)

    Science.gov (United States)

    Patients with advanced CKD exhibit profound changes in the composition and function of the gut microbiome. This is, in part, mediated by: I- heavy influx of urea in the intestinal tract leading to the dominance of urease-possessing bacteria and II- dietary restriction of potassium-rich fruits and ve...

  15. High amylose resistant starch diet ameliorates oxidative stress, inflammation, and progression of chronic kidney disease

    Science.gov (United States)

    Inflammation is a major mediator of CKD progression and is partly driven by altered gut microbiome and intestinal barrier disruption, events which are caused by: urea influx in the intestine resulting in dominance of urease-possessing bacteria; disruption of epithelial barrier by urea-derived ammoni...

  16. Is there variation in resistant starch among high amylose rice varieties?

    Science.gov (United States)

    Resistant starch (RS) is the fraction of the starch and the products of starch degradation that resist digestion in the small intestines of healthy humans and is partially or entirely fermented in the colon by the microbiota. RS in food lowers postprandial glucose concentration and has potential in ...

  17. High-content live cell imaging with RNA probes: advancements in high-throughput antimalarial drug discovery

    Directory of Open Access Journals (Sweden)

    Cervantes Serena

    2009-06-01

    Full Text Available Abstract Background Malaria, a major public health issue in developing nations, is responsible for more than one million deaths a year. The most lethal species, Plasmodium falciparum, causes up to 90% of fatalities. Drug resistant strains to common therapies have emerged worldwide and recent artemisinin-based combination therapy failures hasten the need for new antimalarial drugs. Discovering novel compounds to be used as antimalarials is expedited by the use of a high-throughput screen (HTS to detect parasite growth and proliferation. Fluorescent dyes that bind to DNA have replaced expensive traditional radioisotope incorporation for HTS growth assays, but do not give additional information regarding the parasite stage affected by the drug and a better indication of the drug's mode of action. Live cell imaging with RNA dyes, which correlates with cell growth and proliferation, has been limited by the availability of successful commercial dyes. Results After screening a library of newly synthesized stryrl dyes, we discovered three RNA binding dyes that provide morphological details of live parasites. Utilizing an inverted confocal imaging platform, live cell imaging of parasites increases parasite detection, improves the spatial and temporal resolution of the parasite under drug treatments, and can resolve morphological changes in individual cells. Conclusion This simple one-step technique is suitable for automation in a microplate format for novel antimalarial compound HTS. We have developed a new P. falciparum RNA high-content imaging growth inhibition assay that is robust with time and energy efficiency.

  18. Environmental implications of high metal content in soils of a titanium mining zone in Kenya.

    Science.gov (United States)

    Maina, David M; Ndirangu, Douglas M; Mangala, Michael M; Boman, Johan; Shepherd, Keith; Gatari, Michael J

    2016-11-01

    Mining activities contribute to an increase of specific metal contaminants in soils. This may adversely affect plant life and consequently impact on animal and human health. The objective of this study was to obtain the background metal concentrations in soils around the titanium mining in Kwale County for monitoring its environmental impacts. Forty samples were obtained with half from topsoils and the other from subsoils. X-ray fluorescence spectrometry was used to determine the metal content of the soil samples. High concentrations of Ti, Mn, Fe, and Zr were observed where Ti concentrations ranged from 0.47 to 2.8 %; Mn 0.02 to 3.1 %; Fe 0.89 to 3.1 %; and Zr 0.05 to 0.85 %. Using ratios of elemental concentrations in topsoil to subsoil method and enrichment factors concept, the metals were observed to be of geogenic origin with no anthropogenic input. The high concentrations of Mn and Fe may increase their concentration levels in the surrounding agricultural lands through deposition, thereby causing contamination on the land and the cultivated food crops. The latter can cause adverse human health effects. In addition, titanium mining will produce tailings containing low-level titanium concentrations, which will require proper disposal to avoid increasing titanium concentrations in the soils of the region since it has been observed to be phytotoxic to plants at high concentrations. The results of this study will serve as reference while monitoring the environmental impact by the titanium mining activities.

  19. Assessment of Cr(VI-induced cytotoxicity and genotoxicity using high content analysis.

    Directory of Open Access Journals (Sweden)

    Chad M Thompson

    Full Text Available Oral exposure to high concentrations of hexavalent chromium [Cr(VI] induces intestinal redox changes, villus cytotoxicity, crypt hyperplasia, and intestinal tumors in mice. To assess the effects of Cr(VI in a cell model relevant to the intestine, undifferentiated (proliferating and differentiated (confluent Caco-2 cells were treated with Cr(VI, hydrogen peroxide or rotenone for 2-24 hours. DNA damage was then assessed by nuclear staining intensity of 8-hydroxydeoxyguanosine (8-OHdG and phosphorylated histone variant H2AX (γ-H2AX measured by high content analysis methods. In undifferentiated Caco-2, all three chemicals increased 8-OHdG and γ-H2AX staining at cytotoxic concentrations, whereas only 8-OHdG was elevated at non-cytotoxic concentrations at 24 hr. Differentiated Caco-2 were more resistant to cytotoxicity and DNA damage than undifferentiated cells, and there were no changes in apoptotic markers p53 or annexin-V. However, Cr(VI induced a dose-dependent translocation of the unfolded protein response transcription factor ATF6 into the nucleus. Micronucleus (MN formation was assessed in CHO-K1 and A549 cell lines. Cr(VI increased MN frequency in CHO-K1 only at highly cytotoxic concentrations. Relative to the positive control Mitomycin-C, Cr(VI only slightly increased MN frequency in A549 at mildly cytotoxic concentrations. The results demonstrate that Cr(VI genotoxicity correlates with cytotoxic concentrations, and that H2AX phosphorylation occurs at higher concentrations than oxidative DNA damage in proliferating Caco-2 cells. The findings suggest that in vitro genotoxicity of Cr(VI is primarily oxidative in nature at low concentrations. Implications for in vivo intestinal toxicity of Cr(VI will be discussed.

  20. Susceptibility Contrast in High Field MRI of Human Brain as a Function of Tissue Iron Content

    Science.gov (United States)

    Yao, Bing; Li, Tie-Qiang; van Gelderen, Peter; Shmueli, Karin; de Zwart, Jacco A.; Duyn, Jeff H.

    2009-01-01

    Magnetic susceptibility provides an important contrast mechanism for MRI. Increasingly, susceptibility-based contrast is being exploited to investigate brain tissue microstructure and to detect abnormal levels of brain iron as these have been implicated in a variety of neuro-degenerative diseases. However, it remains unclear to what extent magnetic susceptibility-related contrast at high field relates to actual brain iron concentrations. In this study, we performed susceptibility weighted imaging as a function of field strength on healthy brains in vivo and post-mortem brain tissues at 1.5T, 3T and 7T. Iron histology was performed on the tissue samples for comparison. The calculated susceptibility-related parameters R2* and signal frequency shift in four iron-rich regions (putamen, globus pallidus, caudate, and thalamus) showed an almost linear dependence (r=0.90 for R2*; r=0.83 for phase, p<0.01) on field strength, suggesting that potential ferritin saturation effects are not relevant to susceptibility-weighted contrast for field strengths up to 7T. The R2* dependence on the putative (literature-based) iron concentration was 0.048 Hz/Tesla/ppm. The histological data from brain samples confirmed the linear dependence of R2* on field strength and showed a slope against iron concentration of 0.0099 Hz/Tesla/ppm dry-weight, which is equivalent to 0.05 Hz/Tesla/ppm wet-weight and closely matched the calculated value in vivo. These results confirm the validity of using susceptibility-weighted contrast as an indicator of iron content in iron-rich brain regions. The absence of saturation effects opens the way to exploit the benefits of MRI at high field strengths for the detection of iron distributions with high sensitivity and resolution. PMID:19027861