WorldWideScience

Sample records for hierarchical domain structures

  1. Concept Vector for Similarity Measurement Based on Hierarchical Domain Structure

    OpenAIRE

    Hong Zhe Liu; Hong Bao; Xu

    2012-01-01

    The concept vector model generalizes standard representations of similarity concept in terms of tree-like structure. In the model, each concept node in the hierarchical tree has ancestor and descendent concept nodes composing its relevancy nodes, thus a concept node is represented as a concept vector according to its relevancy nodes' density and the similarity of the two concepts is obtained by computing cosine similarity between their vectors. In addition, the model is adjusted in terms of l...

  2. Time-domain analysis of neural tracking of hierarchical linguistic structures.

    Science.gov (United States)

    Zhang, Wen; Ding, Nai

    2017-02-01

    When listening to continuous speech, cortical activity measured by MEG concurrently follows the rhythms of multiple linguistic structures, e.g., syllables, phrases, and sentences. This phenomenon was previously characterized in the frequency domain. Here, we investigate the waveform of neural activity tracking linguistic structures in the time domain and quantify the coherence of neural response phases over subjects listening to the same stimulus. These analyses are achieved by decomposing the multi-channel MEG recordings into components that maximize the correlation between neural response waveforms across listeners. Each MEG component can be viewed as the recording from a virtual sensor that is spatially tuned to a cortical network showing coherent neural activity over subjects. This analysis reveals information not available from previous frequency-domain analysis of MEG global field power: First, concurrent neural tracking of hierarchical linguistic structures emerges at the beginning of the stimulus, rather than slowly building up after repetitions of the same sentential structure. Second, neural tracking of the sentential structure is reflected by slow neural fluctuations, rather than, e.g., a series of short-lasting transient responses at sentential boundaries. Lastly and most importantly, it shows that the MEG responses tracking the syllabic rhythm are spatially separable from the MEG responses tracking the sentential and phrasal rhythms.

  3. Hierarchical Porous Structures

    Energy Technology Data Exchange (ETDEWEB)

    Grote, Christopher John [Los Alamos National Lab. (LANL), Los Alamos, NM (United States)

    2016-06-07

    Materials Design is often at the forefront of technological innovation. While there has always been a push to generate increasingly low density materials, such as aero or hydrogels, more recently the idea of bicontinuous structures has gone more into play. This review will cover some of the methods and applications for generating both porous, and hierarchically porous structures.

  4. Hierarchically Structured Electrospun Fibers

    Directory of Open Access Journals (Sweden)

    Nicole E. Zander

    2013-01-01

    Full Text Available Traditional electrospun nanofibers have a myriad of applications ranging from scaffolds for tissue engineering to components of biosensors and energy harvesting devices. The generally smooth one-dimensional structure of the fibers has stood as a limitation to several interesting novel applications. Control of fiber diameter, porosity and collector geometry will be briefly discussed, as will more traditional methods for controlling fiber morphology and fiber mat architecture. The remainder of the review will focus on new techniques to prepare hierarchically structured fibers. Fibers with hierarchical primary structures—including helical, buckled, and beads-on-a-string fibers, as well as fibers with secondary structures, such as nanopores, nanopillars, nanorods, and internally structured fibers and their applications—will be discussed. These new materials with helical/buckled morphology are expected to possess unique optical and mechanical properties with possible applications for negative refractive index materials, highly stretchable/high-tensile-strength materials, and components in microelectromechanical devices. Core-shell type fibers enable a much wider variety of materials to be electrospun and are expected to be widely applied in the sensing, drug delivery/controlled release fields, and in the encapsulation of live cells for biological applications. Materials with a hierarchical secondary structure are expected to provide new superhydrophobic and self-cleaning materials.

  5. Detecting Hierarchical Structure in Networks

    DEFF Research Database (Denmark)

    Herlau, Tue; Mørup, Morten; Schmidt, Mikkel Nørgaard;

    2012-01-01

    a generative Bayesian model that is able to infer whether hierarchies are present or not from a hypothesis space encompassing all types of hierarchical tree structures. For efficient inference we propose a collapsed Gibbs sampling procedure that jointly infers a partition and its hierarchical structure......Many real-world networks exhibit hierarchical organization. Previous models of hierarchies within relational data has focused on binary trees; however, for many networks it is unknown whether there is hierarchical structure, and if there is, a binary tree might not account well for it. We propose....... On synthetic and real data we demonstrate that our model can detect hierarchical structure leading to better link-prediction than competing models. Our model can be used to detect if a network exhibits hierarchical structure, thereby leading to a better comprehension and statistical account the network....

  6. Trees and Hierarchical Structures

    CERN Document Server

    Haeseler, Arndt

    1990-01-01

    The "raison d'etre" of hierarchical dustering theory stems from one basic phe­ nomenon: This is the notorious non-transitivity of similarity relations. In spite of the fact that very often two objects may be quite similar to a third without being that similar to each other, one still wants to dassify objects according to their similarity. This should be achieved by grouping them into a hierarchy of non-overlapping dusters such that any two objects in ~ne duster appear to be more related to each other than they are to objects outside this duster. In everyday life, as well as in essentially every field of scientific investigation, there is an urge to reduce complexity by recognizing and establishing reasonable das­ sification schemes. Unfortunately, this is counterbalanced by the experience of seemingly unavoidable deadlocks caused by the existence of sequences of objects, each comparatively similar to the next, but the last rather different from the first.

  7. Structural integrity of hierarchical composites

    Directory of Open Access Journals (Sweden)

    Marco Paggi

    2012-01-01

    Full Text Available Interface mechanical problems are of paramount importance in engineering and materials science. Traditionally, due to the complexity of modelling their mechanical behaviour, interfaces are often treated as defects and their features are not explored. In this study, a different approach is illustrated, where the interfaces play an active role in the design of innovative hierarchical composites and are fundamental for their structural integrity. Numerical examples regarding cutting tools made of hierarchical cellular polycrystalline materials are proposed, showing that tailoring of interface properties at the different scales is the way to achieve superior mechanical responses that cannot be obtained using standard materials

  8. Computer Domain Term Automatic Extraction and Hierarchical Structure Building%计算机领域术语的自动获取与层次构建

    Institute of Scientific and Technical Information of China (English)

    林源; 陈志泊; 孙俏

    2011-01-01

    This paper presents a computer domain term automatic extraction method based on roles and statistics.It uses computer book titles from Amazon.com website as corpus, data are preprocessed by words splitting, stop words and special characters filtering.Terms are extracted by a set of rules and frequency statistics and inserted into a word tree from ODP to build the hierarchical structure.Experimental results show high precision and recall of the automatically extracted results compared with manual tagged terms.%设计一种能够自动获取计算机领域术语的方案,提出基于规则与统计相结合的抽取方法,使用亚马逊网站的计算机类图书作为语料库,通过分词、去停止词预处理以及词频统计的方法提取出计算机类领域术语,并插入到由ODP构建的树中,形成计算机领域术语的层次结构.实验结果表明,与人工标注结果相比,使用该方法自动获取的术语有很高的准确率与召回率.

  9. Hierarchically Structured Electrospun Fibers

    Science.gov (United States)

    2013-01-07

    range of fluorescence could be tuned from yellow-green to blue , making these fibers ideal for micro- and nano-optoelectronic devices [144]. Figure 7...forces. Rapid phase separation of the distorted droplet and energy minimization may lead to the formation of the spider -web-like structure of the fiber...engineering cellularized blood vessels. Biomaterials 2010, 31, 4313–4321. 59. Thorvaldsson, A.; Stenhamre, H.; Gatenholm, P.; Walkenstrom, P

  10. Treatment Protocols as Hierarchical Structures

    Science.gov (United States)

    Ben-Bassat, Moshe; Carlson, Richard W.; Puri, Vinod K.; Weil, Max Harry

    1978-01-01

    We view a treatment protocol as a hierarchical structure of therapeutic modules. The lowest level of this structure consists of individual therapeutic actions. Combinations of individual actions define higher level modules, which we call routines. Routines are designed to manage limited clinical problems, such as the routine for fluid loading to correct hypovolemia. Combinations of routines and additional actions, together with comments, questions, or precautions organized in a branching logic, in turn, define the treatment protocol for a given disorder. Adoption of this modular approach may facilitate the formulation of treatment protocols, since the physician is not required to prepare complex flowcharts. This hierarchical approach also allows protocols to be updated and modified in a flexible manner. By use of such a standard format, individual components may be fitted together to create protocols for multiple disorders. The technique is suited for computer implementation. We believe that this hierarchical approach may facilitate standarization of patient care as well as aid in clinical teaching. A protocol for acute pancreatitis is used to illustrate this technique.

  11. Hierarchical structure of biological systems

    Science.gov (United States)

    Alcocer-Cuarón, Carlos; Rivera, Ana L; Castaño, Victor M

    2014-01-01

    A general theory of biological systems, based on few fundamental propositions, allows a generalization of both Wierner and Berthalanffy approaches to theoretical biology. Here, a biological system is defined as a set of self-organized, differentiated elements that interact pair-wise through various networks and media, isolated from other sets by boundaries. Their relation to other systems can be described as a closed loop in a steady-state, which leads to a hierarchical structure and functioning of the biological system. Our thermodynamical approach of hierarchical character can be applied to biological systems of varying sizes through some general principles, based on the exchange of energy information and/or mass from and within the systems. PMID:24145961

  12. Modeling hierarchical structures - Hierarchical Linear Modeling using MPlus

    CERN Document Server

    Jelonek, M

    2006-01-01

    The aim of this paper is to present the technique (and its linkage with physics) of overcoming problems connected to modeling social structures, which are typically hierarchical. Hierarchical Linear Models provide a conceptual and statistical mechanism for drawing conclusions regarding the influence of phenomena at different levels of analysis. In the social sciences it is used to analyze many problems such as educational, organizational or market dilemma. This paper introduces the logic of modeling hierarchical linear equations and estimation based on MPlus software. I present my own model to illustrate the impact of different factors on school acceptation level.

  13. Modeling hierarchical structures - Hierarchical Linear Modeling using MPlus

    OpenAIRE

    Jelonek, Magdalena

    2006-01-01

    The aim of this paper is to present the technique (and its linkage with physics) of overcoming problems connected to modeling social structures, which are typically hierarchical. Hierarchical Linear Models provide a conceptual and statistical mechanism for drawing conclusions regarding the influence of phenomena at different levels of analysis. In the social sciences it is used to analyze many problems such as educational, organizational or market dilemma. This paper introduces the logic of m...

  14. APPLICATION OF HIERARCHICAL REINFORCEMENT LEARNING IN ENGINEERING DOMAIN

    Institute of Scientific and Technical Information of China (English)

    WEI LI; Qingtai YE; Changming ZHU

    2005-01-01

    The slow convergence rate of reinforcement learning algorithms limits their wider application.In engineering domains, hierarchical reinforcement learning is developed to perform actions temporally according to prior knowledge. This system can converge fast due to reduced state space.There is a test of elevator group control to show the power of the new system. Two conventional group control algorithms are adopted as prior knowledge. Performance indicates that hierarchical reinforcement learning can reduce the learning time dramatically.

  15. Hierarchical Structures in Hypertext Learning Environments

    NARCIS (Netherlands)

    Bezdan, Eniko; Kester, Liesbeth; Kirschner, Paul A.

    2011-01-01

    Bezdan, E., Kester, L., & Kirschner, P. A. (2011, 9 September). Hierarchical Structures in Hypertext Learning Environments. Presentation for the visit of KU Leuven, Open University, Heerlen, The Netherlands.

  16. Urban pattern: Layout design by hierarchical domain splitting

    KAUST Repository

    Yang, Yongliang

    2013-11-01

    We present a framework for generating street networks and parcel layouts. Our goal is the generation of high-quality layouts that can be used for urban planning and virtual environments. We propose a solution based on hierarchical domain splitting using two splitting types: streamline-based splitting, which splits a region along one or multiple streamlines of a cross field, and template-based splitting, which warps pre-designed templates to a region and uses the interior geometry of the template as the splitting lines. We combine these two splitting approaches into a hierarchical framework, providing automatic and interactive tools to explore the design space.

  17. Discovering hierarchical structure in normal relational data

    DEFF Research Database (Denmark)

    Schmidt, Mikkel Nørgaard; Herlau, Tue; Mørup, Morten

    2014-01-01

    Hierarchical clustering is a widely used tool for structuring and visualizing complex data using similarity. Traditionally, hierarchical clustering is based on local heuristics that do not explicitly provide assessment of the statistical saliency of the extracted hierarchy. We propose a non-param...

  18. Nanodomain structures with hierarchical inhomogeneities in PMN-PT.

    Science.gov (United States)

    Kurushima, Kosuke; Kobayashi, Keisuke; Mori, Shigeo

    2012-09-01

    The nanometric domain configuration of (1 - x) Pb(Mg(1/3)Nb(2/3))O(3-x)PbTiO(3) [(1 - x)PMN-xPT] single crystals in the monoclinic phase around a morphotropic phase boundary (MPB) has been examined thoroughly by means of transmission electron microscopy (TEM). Domain structures with hierarchically inhomogeneous configuration were found in the monoclinic phase near the MPB region around x ~ 0.32, which are characterized as nanoscaled lamella-type domain structures with ~10 nm width inside macroscopic-sized banded domains with 100 to 200 nm width. To elucidate formation processes of the domain structures with hierarchically inhomogeneous configuration, an in situ TEM observation of changes of the domain structures in the temperature window between 298K and 500K was carried out. It is revealed that these nanoscaled lamella-type domain structures with ~10 nm width appear inside the banded domains as a result of the tetragonal structure and are inherent to the monoclinic phase.

  19. Hierarchically structured, nitrogen-doped carbon membranes

    KAUST Repository

    Wang, Hong

    2017-08-03

    The present invention is a structure, method of making and method of use for a novel macroscopic hierarchically structured, nitrogen-doped, nano-porous carbon membrane (HNDCMs) with asymmetric and hierarchical pore architecture that can be produced on a large-scale approach. The unique HNDCM holds great promise as components in separation and advanced carbon devices because they could offer unconventional fluidic transport phenomena on the nanoscale. Overall, the invention set forth herein covers a hierarchically structured, nitrogen-doped carbon membranes and methods of making and using such a membranes.

  20. SafeZone: A Hierarchical Inter-Domain Authenticated Source Address Validation Solution

    CERN Document Server

    Li, Jie; Xu, Ke

    2011-01-01

    Next generation Internet is highly concerned about the issue of reliability. Principally, the foundation of reliability is authentication of the source IP address. With the signature-and-verification based defense mechanisms available today, unfortunately, there is a lack of hierarchical architecture, which makes the structure of the trust alliance excessively flat and single. Moreover, with the increasing scale of the trust alliance, costs of validation grow so quickly that they do not adapt to incremental deployment. Via comparison with traditional solutions, this article proposes a hierarchical, inter-domain authenticated source address validation solution named SafeZone. SafeZone employs two intelligent designs, lightweight tag replacement and a hierarchical partitioning scheme, each of which helps to ensure that SafeZone can construct trustworthy and hierarchical trust alliances without the negative influences and complex operations on de facto networks. Extensive experiments also indicate that SafeZone ...

  1. Evaluating Hierarchical Structure in Music Annotations.

    Science.gov (United States)

    McFee, Brian; Nieto, Oriol; Farbood, Morwaread M; Bello, Juan Pablo

    2017-01-01

    Music exhibits structure at multiple scales, ranging from motifs to large-scale functional components. When inferring the structure of a piece, different listeners may attend to different temporal scales, which can result in disagreements when they describe the same piece. In the field of music informatics research (MIR), it is common to use corpora annotated with structural boundaries at different levels. By quantifying disagreements between multiple annotators, previous research has yielded several insights relevant to the study of music cognition. First, annotators tend to agree when structural boundaries are ambiguous. Second, this ambiguity seems to depend on musical features, time scale, and genre. Furthermore, it is possible to tune current annotation evaluation metrics to better align with these perceptual differences. However, previous work has not directly analyzed the effects of hierarchical structure because the existing methods for comparing structural annotations are designed for "flat" descriptions, and do not readily generalize to hierarchical annotations. In this paper, we extend and generalize previous work on the evaluation of hierarchical descriptions of musical structure. We derive an evaluation metric which can compare hierarchical annotations holistically across multiple levels. sing this metric, we investigate inter-annotator agreement on the multilevel annotations of two different music corpora, investigate the influence of acoustic properties on hierarchical annotations, and evaluate existing hierarchical segmentation algorithms against the distribution of inter-annotator agreement.

  2. Evaluating Hierarchical Structure in Music Annotations

    Directory of Open Access Journals (Sweden)

    Brian McFee

    2017-08-01

    Full Text Available Music exhibits structure at multiple scales, ranging from motifs to large-scale functional components. When inferring the structure of a piece, different listeners may attend to different temporal scales, which can result in disagreements when they describe the same piece. In the field of music informatics research (MIR, it is common to use corpora annotated with structural boundaries at different levels. By quantifying disagreements between multiple annotators, previous research has yielded several insights relevant to the study of music cognition. First, annotators tend to agree when structural boundaries are ambiguous. Second, this ambiguity seems to depend on musical features, time scale, and genre. Furthermore, it is possible to tune current annotation evaluation metrics to better align with these perceptual differences. However, previous work has not directly analyzed the effects of hierarchical structure because the existing methods for comparing structural annotations are designed for “flat” descriptions, and do not readily generalize to hierarchical annotations. In this paper, we extend and generalize previous work on the evaluation of hierarchical descriptions of musical structure. We derive an evaluation metric which can compare hierarchical annotations holistically across multiple levels. sing this metric, we investigate inter-annotator agreement on the multilevel annotations of two different music corpora, investigate the influence of acoustic properties on hierarchical annotations, and evaluate existing hierarchical segmentation algorithms against the distribution of inter-annotator agreement.

  3. Quantum transport through hierarchical structures.

    Science.gov (United States)

    Boettcher, S; Varghese, C; Novotny, M A

    2011-04-01

    The transport of quantum electrons through hierarchical lattices is of interest because such lattices have some properties of both regular lattices and random systems. We calculate the electron transmission as a function of energy in the tight-binding approximation for two related Hanoi networks. HN3 is a Hanoi network with every site having three bonds. HN5 has additional bonds added to HN3 to make the average number of bonds per site equal to five. We present a renormalization group approach to solve the matrix equation involved in this quantum transport calculation. We observe band gaps in HN3, while no such band gaps are observed in linear networks or in HN5. We provide a detailed scaling analysis near the edges of these band gaps.

  4. Automatic layout of structured hierarchical reports.

    Science.gov (United States)

    Bakke, Eirik; Karger, David R; Miller, Robert C

    2013-12-01

    Domain-specific database applications tend to contain a sizable number of table-, form-, and report-style views that must each be designed and maintained by a software developer. A significant part of this job is the necessary tweaking of low-level presentation details such as label placements, text field dimensions, list or table styles, and so on. In this paper, we present a horizontally constrained layout management algorithm that automates the display of structured hierarchical data using the traditional visual idioms of hand-designed database UIs: tables, multi-column forms, and outline-style indented lists. We compare our system with pure outline and nested table layouts with respect to space efficiency and readability, the latter with an online user study on 27 subjects. Our layouts are 3.9 and 1.6 times more compact on average than outline layouts and horizontally unconstrained table layouts, respectively, and are as readable as table layouts even for large datasets.

  5. Hierarchical Neural Network Structures for Phoneme Recognition

    CERN Document Server

    Vasquez, Daniel; Minker, Wolfgang

    2013-01-01

    In this book, hierarchical structures based on neural networks are investigated for automatic speech recognition. These structures are evaluated on the phoneme recognition task where a  Hybrid Hidden Markov Model/Artificial Neural Network paradigm is used. The baseline hierarchical scheme consists of two levels each which is based on a Multilayered Perceptron. Additionally, the output of the first level serves as a second level input. The computational speed of the phoneme recognizer can be substantially increased by removing redundant information still contained at the first level output. Several techniques based on temporal and phonetic criteria have been investigated to remove this redundant information. The computational time could be reduced by 57% whilst keeping the system accuracy comparable to the baseline hierarchical approach.

  6. Hierarchical structure of nanofibers by bubbfil spinning

    Directory of Open Access Journals (Sweden)

    Liu Chang

    2015-01-01

    Full Text Available A polymer bubble is easy to be broken under a small external force, various different fragments are formed, which can be produced to different morphologies of products including nanofibers and plate-like strip. Polyvinyl-alcohol/honey solution is used in the experiment to show hierarchical structure by the bubbfil spinning.

  7. Design of Hierarchical Structures for Synchronized Deformations

    Science.gov (United States)

    Seifi, Hamed; Javan, Anooshe Rezaee; Ghaedizadeh, Arash; Shen, Jianhu; Xu, Shanqing; Xie, Yi Min

    2017-01-01

    In this paper we propose a general method for creating a new type of hierarchical structures at any level in both 2D and 3D. A simple rule based on a rotate-and-mirror procedure is introduced to achieve multi-level hierarchies. These new hierarchical structures have remarkably few degrees of freedom compared to existing designs by other methods. More importantly, these structures exhibit synchronized motions during opening or closure, resulting in uniform and easily-controllable deformations. Furthermore, a simple analytical formula is found which can be used to avoid collision of units of the structure during the closing process. The novel design concept is verified by mathematical analyses, computational simulations and physical experiments.

  8. Electronic Properties in a Hierarchical Multilayer Structure

    Institute of Scientific and Technical Information of China (English)

    ZHU Chen-Ping; XIONG Shi-Jie

    2001-01-01

    We investigate electronic properties of a hierarchical multilayer structure consisting of stacking of barriers and wells. The structure is formed in a sequence of generations, each of which is constructed with the same pattern but with the previous generation as the basic building blocks. We calculate the transmission spectrum which shows the multifractal behavior for systems with large generation index. From the analysis of the average resistivity and the multifractal structure of the wavefunctions, we show that there exist different types of states exhibiting extended, localized and intermediate characteristics. The degree of localization is sensitive to the variation of the structural parameters.Suggestion of the possible experimental realization is discussed.

  9. Hierarchical community structure in complex (social) networks

    CERN Document Server

    Massaro, Emanuele

    2014-01-01

    The investigation of community structure in networks is a task of great importance in many disciplines, namely physics, sociology, biology and computer science where systems are often represented as graphs. One of the challenges is to find local communities from a local viewpoint in a graph without global information in order to reproduce the subjective hierarchical vision for each vertex. In this paper we present the improvement of an information dynamics algorithm in which the label propagation of nodes is based on the Markovian flow of information in the network under cognitive-inspired constraints \\cite{Massaro2012}. In this framework we have introduced two more complex heuristics that allow the algorithm to detect the multi-resolution hierarchical community structure of networks from a source vertex or communities adopting fixed values of model's parameters. Experimental results show that the proposed methods are efficient and well-behaved in both real-world and synthetic networks.

  10. Hierarchical mutual information for the comparison of hierarchical community structures in complex networks

    CERN Document Server

    Perotti, Juan Ignacio; Caldarelli, Guido

    2015-01-01

    The quest for a quantitative characterization of community and modular structure of complex networks produced a variety of methods and algorithms to classify different networks. However, it is not clear if such methods provide consistent, robust and meaningful results when considering hierarchies as a whole. Part of the problem is the lack of a similarity measure for the comparison of hierarchical community structures. In this work we give a contribution by introducing the {\\it hierarchical mutual information}, which is a generalization of the traditional mutual information, and allows to compare hierarchical partitions and hierarchical community structures. The {\\it normalized} version of the hierarchical mutual information should behave analogously to the traditional normalized mutual information. Here, the correct behavior of the hierarchical mutual information is corroborated on an extensive battery of numerical experiments. The experiments are performed on artificial hierarchies, and on the hierarchical ...

  11. Hierarchical processing in the prefrontal cortex in a variety of cognitive domains

    Directory of Open Access Journals (Sweden)

    Hyeon-Ae eJeon

    2014-11-01

    Full Text Available This review scrutinizes several findings on human hierarchical processing within the prefrontal cortex (PFC in diverse cognitive domains. Converging evidence from previous studies has shown that the PFC, specifically Brodmann area (BA 44, may function as the essential region for hierarchical processing across the domains. In language fMRI studies, BA 44 was significantly activated for the hierarchical processing of center-embedded sentences and this pattern of activations was also observed in artificial grammar. The same pattern was observed in the visuo-spatial domain where BA44 was actively involved in the processing of hierarchy for the visual symbol. Musical syntax, which is the rule-based arrangement of musical sets, has also been construed as hierarchical processing as in the language domain such that the activation in BA44 was observed in a chord sequence paradigm. P600 ERP was also engendered during the processing of musical hierarchy. Along with a longstanding idea that a human’s number faculty is developed as a by-product of language faculty, BA44 was closely involved in hierarchical processing in mental arithmetic. This review extended its discussion of hierarchical processing to hierarchical behavior, that is, human action which has been referred to as being hierarchically composed. Several lesion and TMS studies supported the involvement of BA44 for hierarchical processing in the action domain. Lastly, the hierarchical organization of cognitive controls was discussed within the PFC, forming a cascade of top-down hierarchical processes operating along a posterior-to-anterior axis of the lateral PFC including BA44 within the network. It is proposed that PFC is actively involved in different forms of hierarchical processing and specifically BA44 may play an integral role in the process. Taking levels of proficiency and subcortical areas into consideration may provide further insight into the functional role of BA44 for hierarchical

  12. Additive Manufacturing of Hierarchical Porous Structures

    Energy Technology Data Exchange (ETDEWEB)

    Grote, Christopher John [Los Alamos National Lab. (LANL), Los Alamos, NM (United States). Materials Science and Technology Division. Polymers and Coatings

    2016-08-30

    Additive manufacturing has become a tool of choice for the development of customizable components. Developments in this technology have led to a powerful array of printers that t serve a variety of needs. However, resin development plays a crucial role in leading the technology forward. This paper addresses the development and application of printing hierarchical porous structures. Beginning with the development of a porous scaffold, which can be functionalized with a variety of materials, and concluding with customized resins for metal, ceramic, and carbon structures.

  13. Hierarchical modeling and its numerical implementation for layered thin elastic structures

    Energy Technology Data Exchange (ETDEWEB)

    Cho, Jin-Rae [Hongik University, Sejong (Korea, Republic of)

    2017-05-15

    Thin elastic structures such as beam- and plate-like structures and laminates are characterized by the small thickness, which lead to classical plate and laminate theories in which the displacement fields through the thickness are assumed linear or higher-order polynomials. These classical theories are either insufficient to represent the complex stress variation through the thickness or may encounter the accuracy-computational cost dilemma. In order to overcome the inherent problem of classical theories, the concept of hierarchical modeling has been emerged. In the hierarchical modeling, the hierarchical models with different model levels are selected and combined within a structure domain, in order to make the modeling error be distributed as uniformly as possible throughout the problem domain. The purpose of current study is to explore the potential of hierarchical modeling for the effective numerical analysis of layered structures such as laminated composite. For this goal, the hierarchical models are constructed and the hierarchical modeling is implemented by selectively adjusting the level of hierarchical models. As well, the major characteristics of hierarchical models are investigated through the numerical experiments.

  14. The hierarchical structure of chemical engineering

    Institute of Scientific and Technical Information of China (English)

    Mooson; KWAUK

    2007-01-01

    Around the turn of the present century,scholars began to recognize chemical engineering as a com-plex system,and have been searching for a convenient point of entry for refreshing its knowledge base.From our study of the dynamic structures of dispersed particles in fluidization and the resultingmulti-scale method,we have been attempting to extend our findings to structures prevailing in othermultiphase systems as well as in the burgeoning industries producing functional materials.Chemicalengineering itself is hierarchically structured.Besides structures based on space and time,such hier-archy could be built from ChE history scaled according to science content,or from ChE operation ac-cording to the expenditure of manpower and capital investment.

  15. The hierarchical structure of chemical engineering

    Institute of Scientific and Technical Information of China (English)

    Mooson KWAUK

    2007-01-01

    Around the turn of the present century, scholars began to recognize chemical engineering as a complex system, and have been searching for a convenient point of entry for refreshing its knowledge base. From our study of the dynamic structures of dispersed particles in fluidization and the resulting multi-scale method, we have been attempting to extend our findings to structures prevailing in other multiphase systems as well as in the burgeoning industries producing functional materials. Chemical engineering itself is hierarchically structured. Besides structures based on space and time, such hierarchy could be built from ChE history scaled according to science content, or from ChE operation according to the expenditure of manpower and capital investment.

  16. Rule weights in a neuro-fuzzy system with a hierarchical domain partition

    National Research Council Canada - National Science Library

    Krzysztof Siminski

    2010-01-01

      Rule weights in a neuro-fuzzy system with a hierarchical domain partition The paper discusses the problem of rule weight tuning in neuro-fuzzy systems with parameterized consequences in which rule...

  17. The Hierarchical Structure and Dynamics of Voids

    CERN Document Server

    Aragon-Calvo, M A

    2012-01-01

    Contrary to the common view voids have very complex internal structure and dynamics. Here we show how the hierarchy of structures in the density field inside voids is reflected by a similar hierarchy of structures in the velocity field. Voids defined by dense filaments and clusters can de described as simple expanding domains with coherent flows everywhere except at their boundaries. At scales smaller that the void radius the velocity field breaks into expanding sub-domains corresponding to sub- voids. These sub-domains break into even smaller sub-sub domains at smaller scales resulting in a nesting hierarchy of locally expanding domains. The ratio between the magnitude of the velocity field responsible for the expansion of the void and the velocity field defining the sub voids is approximately one order of magnitude. The small-scale components of the velocity field play a minor role in the shaping of the voids but they define the local dynamics directly affecting the processes of galaxy formation and evoluti...

  18. Hierarchical structures in fully developed turbulence

    Science.gov (United States)

    Liu, Li

    Analysis of the probability density functions (PDFs) of the velocity increment dvl and of their deformation is used to reveal the statistical structure of the intermittent energy cascade dynamics of turbulence. By analyzing a series of turbulent data sets including that of an experiment of fully developed low temperature helium turbulent gas flow (Belin, Tabeling, & Willaime, Physica D 93, 52, 1996), of a three-dimensional isotropic Navier-Stokes simulation with a resolution of 2563 (Cao, Chen, & She, Phys. Rev. Lett. 76, 3711, 1996) and of a GOY shell model simulation (Leveque & She, Phys. Rev. E 55, 1997) of a very big sample size (up to 5 billions), the validity of the Hierarchical Structure model (She & Leveque, Phys. Rev. Lett. 72, 366, 1994) for the inertial-range is firmly demonstrated. Furthermore, it is shown that parameters in the Hierarchical Structure model can be reliably measured and used to characterize the cascade process. The physical interpretations of the parameters then allow to describe differential changes in different turbulent systems so as to address non-universal features of turbulent systems. It is proposed that the above study provides a framework for the study of non-homogeneous turbulence. A convergence study of moments and scaling exponents is also carried out with detailed analysis of effects of finite statistical sample size. A quantity Pmin is introduced to characterize the resolution of a PDF, and hence the sample size. The fact that any reported scaling exponent depends on the PDF resolution suggests that the validation (or rejection) of a model of turbulence needs to carry out a resolution dependence analysis on its scaling prediction.

  19. Hierarchical structure of the otolith of adult wild carp

    Energy Technology Data Exchange (ETDEWEB)

    Li Zhuo; Gao Yonghua [State key laboratory of new ceramics and fine processing, Department of Materials Science and Engineering, Tsinghua University, Beijing 100084 (China); Feng Qingling, E-mail: biomater@mail.tsinghua.edu.cn [State key laboratory of new ceramics and fine processing, Department of Materials Science and Engineering, Tsinghua University, Beijing 100084 (China)

    2009-04-30

    The otolith of adult wild carp contains a pair of asterisci, a pair of lappilli and a pair of sagittae. Current research works are mainly restricted to the field of the daily ring structure. The purpose of this work is to explore the structural characteristics of carp's otolith in terms of hierarchy from nanometer to millimeter scale by transmission election microscope (TEM) and scanning electron microscope (SEM). Based on the observation, carp's lapillus is composed of ordered aragonite crystals. Seven hierarchical levels of the microstructure were proposed and described with the scheme representing a complete organization in detail. SEM studies show not only the clear daily growth increment, but also the morphology within the single daily increment. The domain structure of crystal orientation in otolith was observed for the first time. Furthermore, TEM investigation displays that the lapillus is composed of aragonite crystals with nanometer scale. Four hierarchical levels of the microstructure of the sagitta are also proposed. The asteriscus which is composed of nanometer scale vaterite crystals is considered to have a uniform structure.

  20. Crack Propagation in Bamboo's Hierarchical Cellular Structure

    Science.gov (United States)

    Habibi, Meisam K.; Lu, Yang

    2014-07-01

    Bamboo, as a natural hierarchical cellular material, exhibits remarkable mechanical properties including excellent flexibility and fracture toughness. As far as bamboo as a functionally graded bio-composite is concerned, the interactions of different constituents (bamboo fibers; parenchyma cells; and vessels.) alongside their corresponding interfacial areas with a developed crack should be of high significance. Here, by using multi-scale mechanical characterizations coupled with advanced environmental electron microscopy (ESEM), we unambiguously show that fibers' interfacial areas along with parenchyma cells' boundaries were preferred routes for crack growth in both radial and longitudinal directions. Irrespective of the honeycomb structure of fibers along with cellular configuration of parenchyma ground, the hollow vessels within bamboo culm affected the crack propagation too, by crack deflection or crack-tip energy dissipation. It is expected that the tortuous crack propagation mode exhibited in the present study could be applicable to other cellular natural materials as well.

  1. Hierarchical structure and biomineralization in cricket tooth

    CERN Document Server

    Xing, Xueqing; Cai, Quan; Mo, Guang; Du, Rong; Chen, Zhongjun; Wu, Zhonghua

    2012-01-01

    Cricket is a truculent insect with stiff and sharp teeth as a fighting weapon. The structure and possible biomineralization of the cricket teeth are always interested. Synchrotron radiation X-ray fluorescence, X-ray diffraction and small angle X-ray scattering techniques were used to probe the element distribution, possible crystalline structures and size distribution of scatterers in cricket teeth. Scanning electron microscope was used to observe the nanoscaled structure. The results demonstrate that Zn is the main heavy element in cricket teeth. The surface of the cricket teeth has a crystalline compound like ZnFe2(AsO4)2(OH)2(H2O)4. While, the interior of the teeth has a crystalline compound like ZnCl2, which is from the biomineralization. The ZnCl2-like biomineral forms nanoscaled microfibrils and their axial direction points at the top of tooth cusp. The microfibrils aggregate random into intermediate filaments, forming a hierarchical structure. A sketch map of the cricket tooth cusp was proposed and a d...

  2. Hierarchical structure of moral stages assessed by a sorting task

    NARCIS (Netherlands)

    Boom, J.; Brugman, D.; Van der Heijden, P.G.M.

    2001-01-01

    Following criticism of Kohlberg’s theory of moral judgment, an empirical re-examination of hierarchical stage structure was desirable. Utilizing Piaget’s concept of reflective abstraction as a basis, the hierarchical stage structure was investigated using a new method. Study participants (553 Dutch

  3. The chromosome axis controls meiotic events through a hierarchical assembly of HORMA domain proteins.

    Science.gov (United States)

    Kim, Yumi; Rosenberg, Scott C; Kugel, Christine L; Kostow, Nora; Rog, Ofer; Davydov, Vitaliy; Su, Tiffany Y; Dernburg, Abby F; Corbett, Kevin D

    2014-11-24

    Proteins of the HORMA domain family play central, but poorly understood, roles in chromosome organization and dynamics during meiosis. In Caenorhabditis elegans, four such proteins (HIM-3, HTP-1, HTP-2, and HTP-3) have distinct but overlapping functions. Through combined biochemical, structural, and in vivo analysis, we find that these proteins form hierarchical complexes through binding of their HORMA domains to cognate peptides within their partners' C-terminal tails, analogous to the "safety belt" binding mechanism of Mad2. These interactions are critical for recruitment of HIM-3, HTP-1, and HTP-2 to chromosome axes. HTP-3, in addition to recruiting the other HORMA domain proteins to the axis, plays an independent role in sister chromatid cohesion and double-strand break formation. Finally, we find that mammalian HORMAD1 binds a motif found both at its own C terminus and at that of HORMAD2, indicating that this mode of intermolecular association is a conserved feature of meiotic chromosome structure in eukaryotes. Copyright © 2014 Elsevier Inc. All rights reserved.

  4. Hierarchical Data Structures, Institutional Research, and Multilevel Modeling

    Science.gov (United States)

    O'Connell, Ann A.; Reed, Sandra J.

    2012-01-01

    Multilevel modeling (MLM), also referred to as hierarchical linear modeling (HLM) or mixed models, provides a powerful analytical framework through which to study colleges and universities and their impact on students. Due to the natural hierarchical structure of data obtained from students or faculty in colleges and universities, MLM offers many…

  5. Cortical tracking of hierarchical linguistic structures in connected speech.

    Science.gov (United States)

    Ding, Nai; Melloni, Lucia; Zhang, Hang; Tian, Xing; Poeppel, David

    2016-01-01

    The most critical attribute of human language is its unbounded combinatorial nature: smaller elements can be combined into larger structures on the basis of a grammatical system, resulting in a hierarchy of linguistic units, such as words, phrases and sentences. Mentally parsing and representing such structures, however, poses challenges for speech comprehension. In speech, hierarchical linguistic structures do not have boundaries that are clearly defined by acoustic cues and must therefore be internally and incrementally constructed during comprehension. We found that, during listening to connected speech, cortical activity of different timescales concurrently tracked the time course of abstract linguistic structures at different hierarchical levels, such as words, phrases and sentences. Notably, the neural tracking of hierarchical linguistic structures was dissociated from the encoding of acoustic cues and from the predictability of incoming words. Our results indicate that a hierarchy of neural processing timescales underlies grammar-based internal construction of hierarchical linguistic structure.

  6. Mechanically robust superhydrophobicity on hierarchically structured Si surfaces

    Energy Technology Data Exchange (ETDEWEB)

    Xiu Yonghao; Hess, Dennis W [School of Chemical and Biomolecular Engineering, Georgia Institute of Technology, 311 Ferst Drive, Atlanta, GA 30332-0100 (United States); Liu Yan; Wong, C P, E-mail: dennis.hess@chbe.gatech.edu, E-mail: cp.wong@mse.gatech.edu [School of Materials Science and Engineering, Georgia Institute of Technology, 771 Ferst Drive, Atlanta, GA 30332-0245 (United States)

    2010-04-16

    Improvement of the robustness of superhydrophobic surfaces is critical in order to achieve commercial applications of these surfaces in such diverse areas as self-cleaning, water repellency and corrosion resistance. In this study, the mechanical robustness of superhydrophobic surfaces was evaluated on hierarchically structured silicon surfaces. The effect of two-scale hierarchical structures on robustness was investigated using an abrasion test and the results compared to those of superhydrophobic surfaces fabricated from polymeric materials and from silicon that contains only nanostructures. Unlike the polymeric and nanostructure-only surfaces, the hierarchical structures retained superhydrophobic behavior after mechanical abrasion.

  7. Alligator osteoderms: Mechanical behavior and hierarchical structure

    Energy Technology Data Exchange (ETDEWEB)

    Chen, Irene H. [Materials Science and Engineering Program, University of California, San Diego, La Jolla, CA 92093 (United States); Yang, Wen, E-mail: wey005@eng.ucsd.edu [Materials Science and Engineering Program, University of California, San Diego, La Jolla, CA 92093 (United States); Meyers, Marc A. [Materials Science and Engineering Program, University of California, San Diego, La Jolla, CA 92093 (United States); Departments of Mechanical and Aerospace Engineering and Nanoengineering, University of California, San Diego, La Jolla, CA 92093 (United States)

    2014-02-01

    Osteoderms are bony scutes embedded underneath the dermal layers of the skin acting as a protection of the alligator (Archosauria: Crocodylia) internal organs and tissues. Additionally, these scutes function as an aid in temperature regulation. The scutes are inter-linked by fibrous connective tissue. They have properties similar to bone and thus have the necessary toughness to provide protection against predators. The scutes consist of hydroxyapatite and have a porosity of approximately 12%. They have a disc-like morphology with a ridge along the middle of the plate, called the keel; the outer perimeter of the disc has depressions, grooves, and jagged edges which anchor the collagen and act as sutures. Computerized tomography reveals the pattern of elongated pores, which emanate from the keel in a radial pattern. Micro-indentation measurements along the cross-section show a zigzag behavior due to the porosity. Compression results indicate that the axial direction is the strongest (UTS ∼ 67 MPa) and toughest (11 MJ/m{sup 3}); this is the orientation in which they undergo the largest external compression forces from predator teeth. Toughening mechanisms are identified through observation of the damage progression and interpreted in mechanistic terms. They are: flattening of pores, microcrack opening, and microcrack growth and coalescence. Collagen plays an essential role in toughening and plasticity by providing bridges that impede the opening of the cracks and prevent their growth. - Highlights: • We characterized the hierarchical structure of alligator scute. • The anisotropic mechanical behavior of alligator scute was studied. • Toughening mechanisms were identified at the micro- and nano-levels.

  8. Hierarchically Structured Monolithic ZSM-5 through Macroporous Silica Gel Zeolitization

    Institute of Scientific and Technical Information of China (English)

    Lei Qian; Zhao Tianbo; Li Fengyan; Zong Baoning; Tong Yangchuan

    2006-01-01

    The hierarchically structured ZSM-5 monolith was prepared through transforming the skeletons of the macroporous silica gel into ZSM-5 by the steam-assisted conversion method. The morphology and monolithic shapes of macroporous silica gel were well preserved. The hierarchically structured ZSM-5 monolith exhibited the hierarchical porosity, with mesopores and macropores existing inside the macroporous silica gel, and micropores formed by the ZSM-5. The products have been characterized properly by using the XRD, SEM and N2 adsorption-desorption methods.

  9. Hierarchical Optimization of Material and Structure

    DEFF Research Database (Denmark)

    Rodrigues, Helder C.; Guedes, Jose M.; Bendsøe, Martin P.

    2002-01-01

    This paper describes a hierarchical computational procedure for optimizing material distribution as well as the local material properties of mechanical elements. The local properties are designed using a topology design approach, leading to single scale microstructures, which may be restricted...... in various ways, based on design and manufacturing criteria. Implementation issues are also discussed and computational results illustrate the nature of the procedure....

  10. Hierarchical structure of moral stages assessed by a sorting task

    OpenAIRE

    Van Boom, J; Brugman, D.; Heijden, P.G.M. van der

    2001-01-01

    Following criticism of Kohlberg’s theory of moral judgment, an empirical re-examination of hierarchical stage structure was desirable. Utilizing Piaget’s concept of reflective abstraction as a basis, the hierarchical stage structure was investigated using a new method. Study participants (553 Dutch university students and 196 Russian high school students) sorted statements in terms of moral sophistication. These statements were typical for the different stages of moral development as defined ...

  11. Road Network Selection Based on Road Hierarchical Structure Control

    Directory of Open Access Journals (Sweden)

    HE Haiwei

    2015-04-01

    Full Text Available A new road network selection method based on hierarchical structure is studied. Firstly, road network is built as strokes which are then classified into hierarchical collections according to the criteria of betweenness centrality value (BC value. Secondly, the hierarchical structure of the strokes is enhanced using structural characteristic identification technique. Thirdly, the importance calculation model was established according to the relationships among the hierarchical structure of the strokes. Finally, the importance values of strokes are got supported with the model's hierarchical calculation, and with which the road network is selected. Tests are done to verify the advantage of this method by comparing it with other common stroke-oriented methods using three kinds of typical road network data. Comparision of the results show that this method had few need to semantic data, and could eliminate the negative influence of edge strokes caused by the criteria of BC value well. So, it is better to maintain the global hierarchical structure of road network, and suitable to meet with the selection of various kinds of road network at the same time.

  12. Domains and facets: hierarchical personality assessment using the revised NEO personality inventory.

    Science.gov (United States)

    Costa, P T; McCrae, R R

    1995-02-01

    Personality traits are organized hierarchically, with narrow, specific traits combining to define broad, global factors. The Revised NEO Personality Inventory (NEO-PI-R; Costa & McCrae, 1992c) assesses personality at both levels, with six specific facet scales in each of five broad domains. This article describes conceptual issues in specifying facets of a domain and reports evidence on the validity of NEO-PI-R facet scales. Facet analysis-the interpretation of a scale in terms of the specific facets with which it correlates-is illustrated using alternative measures of the five-factor model and occupational scales. Finally, the hierarchical interpretation of personality profiles is discussed. Interpretation on the domain level yields a rapid understanding of the individual interpretation of specific facet scales gives a more detailed assessment.

  13. 3D Printing of Hierarchical Silk Fibroin Structures.

    Science.gov (United States)

    Sommer, Marianne R; Schaffner, Manuel; Carnelli, Davide; Studart, André R

    2016-12-21

    Like many other natural materials, silk is hierarchically structured from the amino acid level up to the cocoon or spider web macroscopic structures. Despite being used industrially in a number of applications, hierarchically structured silk fibroin objects with a similar degree of architectural control as in natural structures have not been produced yet due to limitations in fabrication processes. In a combined top-down and bottom-up approach, we exploit the freedom in macroscopic design offered by 3D printing and the template-guided assembly of ink building blocks at the meso- and nanolevel to fabricate hierarchical silk porous materials with unprecedented structural control. Pores with tunable sizes in the range 40-350 μm are generated by adding sacrificial organic microparticles as templates to a silk fibroin-based ink. Commercially available wax particles or monodisperse polycaprolactone made by microfluidics can be used as microparticle templates. Since closed pores are generated after template removal, an ultrasonication treatment can optionally be used to achieve open porosity. Such pore templating particles can be further modified with nanoparticles to create a hierarchical template that results in porous structures with a defined nanotopography on the pore walls. The hierarchically porous silk structures obtained with this processing technique can potentially be utilized in various application fields from structural materials to thermal insulation to tissue engineering scaffolds.

  14. Hierarchical Self-Assembled Structures from POSS-Containing Block Copolymers Synthesized by Living Anionic Polymerization

    Energy Technology Data Exchange (ETDEWEB)

    Hirai, Tomoyasu; Leolukman, Melvina; Jin, Sangwoo; Goseki, Raita; Ishida, Yoshihito; Kakimoto, Masa-aki; Hayakawa, Teruaki; Ree, Moonhor; Gopalan, Padma; (Tokyo Inst. Tech.); (UW); (POSTECH)

    2010-03-16

    Two kinds of polyhedral oligomeric silsesquioxane (POSS)-containing block copolymers (BCPs), namely PS-b-PMAPOSS and PMMA-b-PMAPOSS, were synthesized by living anionic polymerization. A wide range of molecular weights were obtained with a very narrow polydispersity index of less than 1.09. The bulk samples prepared by slow evaporation from a polymer solution in chloroform exhibit well-defined microphase-separated structures with long-range order. Thermal annealing induced hierarchical structures consisting of a smaller length scale ordered crystalline POSS domains within the larger microphase-separated structures. We report detailed structural characterization of these hierarchical structures in bulk and thin films by transmission electron microscopy and grazing incidence wide-angle X-ray scattering (GIWAXS). On the basis of this structural analysis, we propose a model for the formation of an orthorhombic lattice structure through the aggregation of POSS segments which formed a helix-like structure.

  15. Detect overlapping and hierarchical community structure in networks

    CERN Document Server

    Shen, Huawei; Cai, Kai; Hu, Mao-Bin

    2008-01-01

    Clustering and community structure is crucial for many network systems and the related dynamic processes. It has been shown that communities are usually overlapping and hierarchical. However, previous methods investigate these two properties of community structure separately. This paper propose an algorithm (EAGLE) to detect both the overlapping and hierarchical properties of complex community structure together. This algorithm deals with the set of maximal cliques and adopts an agglomerative framework. The quality function of modularity is extended to evaluate the goodness of a cover. The examples of application to real world networks give excellent results.

  16. Trait anxiety, disgust sensitivity, and the hierarchic structure of fears.

    Science.gov (United States)

    McDonald, Scott D; Hartman, Nathan S; Vrana, Scott R

    2008-08-01

    This paper describes an evaluation of Taylor's (1998) hierarchic model of fears and its relationship to trait anxiety and disgust sensitivity (DS). In Study 1 (N=420), a confirmatory factor analysis supported a hierarchic structure of fears. Next, an analysis using structural equation modeling indicated that trait anxiety is associated with claustrophobic and social fears, whereas DS is associated with all four fear subtypes examined (claustrophobic, social, blood-injection-injury and animal). However, trait anxiety and DS did not account for all variance shared by fear subtypes. The addition of a generalized "fear factor" accounted for significant residual shared variance between the four fear subtypes, beyond that accounted for by trait anxiety and DS. Study 2 (N=213) generally replicated these results. Findings suggest that the hierarchic structural model of fears would benefit from inclusion of trait anxiety and DS as higher-order contributors to fearfulness.

  17. Structure of axionic domain walls

    Science.gov (United States)

    Huang, M. C.; Sikivie, P.

    1985-09-01

    The structure of axionic domain walls is investigated using the low-energy effective theory of axions and pions. We derive the spatial dependence of the phases of the Peccei-Quinn scalar field and the QCD quark-antiquark condensates inside an axionic domain wall. Thence an accurate estimate of the wall surface energy density is obtained. The equations of motion for axions, photons, leptons, and baryons in the neighborhood of axionic domain walls are written down and estimates are given for the wall reflection and transmission coefficients of these particles. Finally, we discuss the energy dissipation by axionic domain walls oscillating in the early universe due to the reflection of particles in the primordial soup.

  18. Structure of axionic domain walls

    Energy Technology Data Exchange (ETDEWEB)

    Huang, M.C.; Sikivie, P.

    1985-09-15

    The structure of axionic domain walls is investigated using the low-energy effective theory of axions and pions. We derive the spatial dependence of the phases of the Peccei-Quinn scalar field and the QCD quark-antiquark condensates inside an axionic domain wall. Thence an accurate estimate of the wall surface energy density is obtained. The equations of motion for axions, photons, leptons, and baryons in the neighborhood of axionic domain walls are written down and estimates are given for the wall reflection and transmission coefficients of these particles. Finally, we discuss the energy dissipation by axionic domain walls oscillating in the early universe due to the reflection of particles in the primordial soup.

  19. Micro-nanofibers with hierarchical structure by bubbfil-spinning

    Directory of Open Access Journals (Sweden)

    Liu Peng

    2015-01-01

    Full Text Available Bubbfil spinning is used to fabricate micro/nanofibers with hierarchical structure. The wall of a polymer film is attenuated unevenly by a blowing air. The burst of the bubble results in film fragments with different thickness, as a result, different sizes of fibers are obtained.

  20. Hierarchically structured superoleophobic surfaces with ultralow contact angle hysteresis.

    Science.gov (United States)

    Kota, Arun K; Li, Yongxin; Mabry, Joseph M; Tuteja, Anish

    2012-11-14

    Hierarchically structured, superoleophobic surfaces are demonstrated that display one of the lowest contact angle hysteresis values ever reported - even with extremely low-surface-tension liquids such as n-heptane. Consequently, these surfaces allow, for the first time, even ≈2 μL n-heptane droplets to bounce and roll-off at tilt angles. ≤ 2°.

  1. Content Consumption and Hierarchical Structures of Web-Supported Courses

    Science.gov (United States)

    Hershkovitz, Arnon; Hardof-Jaffe, Sharon; Nachmias, Rafi

    2014-01-01

    This study presents an empirical investigation of the relationship between the hierarchical structure of content delivered to students within a Learning Management System (LMS) and its actual consumption. To this end, campus-wide data relating to 1,203 courses were collected from the LMS' servers and were subsequently analyzed using data mining…

  2. Hierarchical structures of ZnO spherical particles synthesized solvothermally

    Science.gov (United States)

    Saito, Noriko; Haneda, Hajime

    2011-12-01

    We review the solvothermal synthesis, using a mixture of ethylene glycol (EG) and water as the solvent, of zinc oxide (ZnO) particles having spherical and flower-like shapes and hierarchical nanostructures. The preparation conditions of the ZnO particles and the microscopic characterization of the morphology are summarized. We found the following three effects of the ratio of EG to water on the formation of hierarchical structures: (i) EG restricts the growth of ZnO microcrystals, (ii) EG promotes the self-assembly of small crystallites into spheroidal particles and (iii) the high water content of EG results in hollow spheres.

  3. Hierarchical structures of ZnO spherical particles synthesized solvothermally

    Directory of Open Access Journals (Sweden)

    Noriko Saito and Hajime Haneda

    2011-01-01

    Full Text Available We review the solvothermal synthesis, using a mixture of ethylene glycol (EG and water as the solvent, of zinc oxide (ZnO particles having spherical and flower-like shapes and hierarchical nanostructures. The preparation conditions of the ZnO particles and the microscopic characterization of the morphology are summarized. We found the following three effects of the ratio of EG to water on the formation of hierarchical structures: (i EG restricts the growth of ZnO microcrystals, (ii EG promotes the self-assembly of small crystallites into spheroidal particles and (iii the high water content of EG results in hollow spheres.

  4. Evaluating Hierarchical Structure in Music Annotations

    OpenAIRE

    Brian McFee; Oriol Nieto; Morwaread M. Farbood; Juan Pablo Bello

    2017-01-01

    Music exhibits structure at multiple scales, ranging from motifs to large-scale functional components. When inferring the structure of a piece, different listeners may attend to different temporal scales, which can result in disagreements when they describe the same piece. In the field of music informatics research (MIR), it is common to use corpora annotated with structural boundaries at different levels. By quantifying disagreements between multiple annotators, previous research has yielded...

  5. Auction-based resource allocation game under a hierarchical structure

    Science.gov (United States)

    Cui, Yingying; Zou, Suli; Ma, Zhongjing

    2016-01-01

    This paper studies a class of auction-based resource allocation games under a hierarchical structure, such that each supplier is assigned a certain amount of resource from a single provider and allocates it to its buyers with auction mechanisms. To implement the efficient allocations for the underlying hierarchical system, we first design an auction mechanism, for each local system composed of a supplier and its buyers, which inherits the advantages of the progressive second price mechanism. By employing a dynamic algorithm, each local system converges to its own efficient Nash equilibrium, at which the efficient resource allocation is achieved and the bidding prices of all the buyers in this local system are identical with each other. After the local systems reach their own equilibria respectively, the resources assigned to suppliers are readjusted via a dynamic hierarchical algorithm with respect to the bidding prices associated with the implemented equilibria of local systems. By applying the proposed hierarchical process, the formulated hierarchical system can converge to the efficient allocation under certain mild conditions. The developed results in this work are demonstrated with simulations.

  6. Mapping the hierarchical layout of the structural network of the macaque prefrontal cortex.

    Science.gov (United States)

    Goulas, Alexandros; Uylings, Harry B M; Stiers, Peter

    2014-05-01

    A consensus on the prefrontal cortex (PFC) holds that it is pivotal for flexible behavior and the integration of the cognitive, affective, and motivational domains. Certain models have been put forth and a dominant model postulates a hierarchical anterior-posterior gradient. The structural connectivity principles of this model dictate that increasingly anterior PFC regions exhibit more efferent connections toward posterior ones than vice versa. Such hierarchical asymmetry principles are thought to pertain to the macaque PFC. Additionally, the laminar patterns of the connectivity of PFC regions can be used for defining hierarchies. In the current study, we formally tested the asymmetry-based hierarchical principles of the anterior-posterior model by employing an exhaustive dataset on macaque PFC connectivity and tools from network science. On the one hand, the asymmetry-based principles and predictions of the hierarchical anterior-posterior model were not confirmed. The wiring of the macaque PFC does not fully correspond to the principles of the model, and its asymmetry-based hierarchical layout does not follow a strict anterior-posterior gradient. On the other hand, our results suggest that the laminar-based hierarchy seems a more tenable working hypothesis for models advocating an anterior-posterior gradient. Our results can inform models of the human PFC.

  7. Zeólitas hierarquicamente estruturadas Hierarchically structured zeolites

    Directory of Open Access Journals (Sweden)

    Saulo de Tarso Figueiredo Grecco

    2013-01-01

    Full Text Available This review presents the main characteristics and properties of microporous (zeolites and ordered mesoporous materials, focusing on structural aspects and preparation. In addition, their use as heterogeneous catalysts are also discussed, with emphasis on their advantages and disadvantages. Due to difficulty in application of zeolites in the conversion of bulky molecules, the most relevant strategies of synthesis for the preparation of zeolitic materials with hierarchical pore structure was also analyzed, which allow this limitation to be overcome.

  8. Hierarchical semantic structures for medical NLP.

    Science.gov (United States)

    Taira, Ricky K; Arnold, Corey W

    2013-01-01

    We present a framework for building a medical natural language processing (NLP) system capable of deep understanding of clinical text reports. The framework helps developers understand how various NLP-related efforts and knowledge sources can be integrated. The aspects considered include: 1) computational issues dealing with defining layers of intermediate semantic structures to reduce the dimensionality of the NLP problem; 2) algorithmic issues in which we survey the NLP literature and discuss state-of-the-art procedures used to map between various levels of the hierarchy; and 3) implementation issues to software developers with available resources. The objective of this poster is to educate readers to the various levels of semantic representation (e.g., word level concepts, ontological concepts, logical relations, logical frames, discourse structures, etc.). The poster presents an architecture for which diverse efforts and resources in medical NLP can be integrated in a principled way.

  9. Information and hierarchical structure in financial markets

    Science.gov (United States)

    Mantegna, R. N.

    1999-09-01

    I investigate the information content present in the time series of stock prices of a portfolio of stocks traded in a financial market. By investigating the correlation coefficient between pairs of stocks I provide a working definition of a generalized distance between the stocks of the portfolio. This generalized distance is used to obtain an ultrametric distance matrix between the stocks. The ultrametric structure of the portfolio investigated has associated a taxonomy which is meaningful from an economic point of view.

  10. Rapid fabrication of hierarchically structured supramolecular nanocomposite thin films in one minute

    Science.gov (United States)

    Xu, Ting; Kao, Joseph

    2016-11-08

    Functional nanocomposites containing nanoparticles of different chemical compositions may exhibit new properties to meet demands for advanced technology. It is imperative to simultaneously achieve hierarchical structural control and to develop rapid, scalable fabrication to minimize degradation of nanoparticle properties and for compatibility with nanomanufacturing. The assembly kinetics of supramolecular nanocomposite in thin films is governed by the energetic cost arising from defects, the chain mobility, and the activation energy for inter-domain diffusion. By optimizing only one parameter, the solvent fraction in the film, the assembly kinetics can be precisely tailored to produce hierarchically structured thin films of supramolecular nanocomposites in approximately one minute. Moreover, the strong wavelength dependent optical anisotropy in the nanocomposite highlights their potential applications for light manipulation and information transmission. The present invention opens a new avenue in designing manufacture-friendly continuous processing for the fabrication of functional nanocomposite thin films.

  11. Rapid fabrication of hierarchically structured supramolecular nanocomposite thin films in one minute

    Energy Technology Data Exchange (ETDEWEB)

    Xu, Ting; Kao, Joseph

    2016-11-08

    Functional nanocomposites containing nanoparticles of different chemical compositions may exhibit new properties to meet demands for advanced technology. It is imperative to simultaneously achieve hierarchical structural control and to develop rapid, scalable fabrication to minimize degradation of nanoparticle properties and for compatibility with nanomanufacturing. The assembly kinetics of supramolecular nanocomposite in thin films is governed by the energetic cost arising from defects, the chain mobility, and the activation energy for inter-domain diffusion. By optimizing only one parameter, the solvent fraction in the film, the assembly kinetics can be precisely tailored to produce hierarchically structured thin films of supramolecular nanocomposites in approximately one minute. Moreover, the strong wavelength dependent optical anisotropy in the nanocomposite highlights their potential applications for light manipulation and information transmission. The present invention opens a new avenue in designing manufacture-friendly continuous processing for the fabrication of functional nanocomposite thin films.

  12. Spatio-temporal map generalizations with the hierarchical Voronoi data structure

    DEFF Research Database (Denmark)

    Mioc, Darka; Anton, François; Gold, Christopher M.

    of map objects, together with their temporal and spatial adjacency relationships. In this paper, we present new solutions to the problems of spatio-temporal generalizations using the hierarchical Voronoi spatio-temporal data structure. The application of the hierarchical Voronoi data structure presented...... in this research is in spatio-temporal map generalization, which is needed for reasoning about dynamic aspects of the world, primarily about actions, events and processes. This provides an advance in the domain of map generalization as we are able to deal not only with the cartographic objects, but also...... implemented in commercial GIS systems. In this research, we used the Voronoi spatial data model for map generalizations. We were able to demonstrate that the map generalization does not affect only spatial objects (points, lines or polygons), but also the events corresponding to the creation and modification...

  13. Growth Mechanism of Pumpkin-Shaped Vaterite Hierarchical Structures

    Science.gov (United States)

    Ma, Guobin; Xu, Yifei; Wang, Mu

    2015-03-01

    CaCO3-based biominerals possess sophisticated hierarchical structures and promising mechanical properties. Recent researches imply that vaterite may play an important role in formation of CaCO3-based biominerals. However, as a less common polymorph of CaCO3, the growth mechanism of vaterite remains not very clear. Here we report the growth of a pumpkin-shaped vaterite hierarchical structure with a six-fold symmetrical axis and lamellar microstructure. We demonstrate that the growth is controlled by supersaturation and the intrinsic crystallographic anisotropy of vaterite. For the scenario of high supersaturation, the nucleation rate is higher than the lateral extension rate, favoring the ``double-leaf'' spherulitic growth. Meanwhile, nucleation occurs preferentially in as determined by the crystalline structure of vaterite, modulating the grown products with a hexagonal symmetry. The results are beneficial for an in-depth understanding of the biomineralization of CaCO3. The growth mechanism may also be applicable to interpret the formation of similar hierarchical structures of other materials. The authors gratefully acknowledge the financial support from National Science Foundation of China (Grant Nos. 51172104 and 50972057) and National Key Basic Research Program of China (Grant No. 2010CB630705).

  14. Simulating Self-organization and Interference between Certain Hierarchical Structures.

    Science.gov (United States)

    Raczynski, Stanislaw

    2014-10-01

    A model of the dynamics and interactions between organizations with self-organizing hierarchical structures is presented for discrete events. The active objects of the model are individuals (people, organization members). The parameters of an individual are ability, corruption level, resources, and lust for power, among others. Three organizations are generated and interact with each other, attempting to gain more members and power. The individuals appear and disappear, due to a simple 'birth-and-death' process. If an individual disappears from the model, a corresponding reconfiguration in the hierarchical structure occurs. The organization's growth and macro-patterns are the result of the activities of the individuals. The aim of the simulation is to visualize the evolution of the organizations and the stability of the whole system. A 'steady state' for the model is rare; instead, in most parameter configurations, the model enters into oscillations.

  15. Hierarchical Cellular Structures in High-Capacity Cellular Communication Systems

    CERN Document Server

    Jain, R K; Agrawal, N K

    2011-01-01

    In the prevailing cellular environment, it is important to provide the resources for the fluctuating traffic demand exactly in the place and at the time where and when they are needed. In this paper, we explored the ability of hierarchical cellular structures with inter layer reuse to increase the capacity of mobile communication network by applying total frequency hopping (T-FH) and adaptive frequency allocation (AFA) as a strategy to reuse the macro and micro cell resources without frequency planning in indoor pico cells [11]. The practical aspects for designing macro- micro cellular overlays in the existing big urban areas are also explained [4]. Femto cells are inducted in macro / micro / pico cells hierarchical structure to achieve the required QoS cost effectively.

  16. Hierarchical structure of biological systems: A bioengineering approach

    OpenAIRE

    Alcocer-Cuarón, Carlos; Rivera, Ana L; Castaño, Victor M.

    2013-01-01

    A general theory of biological systems, based on few fundamental propositions, allows a generalization of both Wierner and Berthalanffy approaches to theoretical biology. Here, a biological system is defined as a set of self-organized, differentiated elements that interact pair-wise through various networks and media, isolated from other sets by boundaries. Their relation to other systems can be described as a closed loop in a steady-state, which leads to a hierarchical structure and function...

  17. Osteoblast Behavior on Hierarchical Micro-/Nano-Structured Titanium Surface

    Institute of Scientific and Technical Information of China (English)

    Weiyan Meng; Yanmin Zhou; Yanjing Zhang; Qing Cai; Liming Yang; Jinghui Zhao; Chnnyan Li

    2011-01-01

    In the present work, osteoblast behavior on a hierarchical micro-/nano-structured titanium surface was investigated. A hierarchical hybrid micro-/nano-structured titanium surface topography was produced via Electrolytic Etching (EE). MG-63 cells were cultured on disks for 2 h to 7 days. The osteoblast response to the hierarchical hybrid micro-/nano-structured titanium surface was evaluated through the osteoblast cell morphology, attachment and proliferation. For comparison, MG-63 cells were also cultured on Sandblasted and Acid-etched (SLA) as well as Machined (M) surfaces respectively. The results show significant differences in the adhesion rates and proliferation levels of MG-63 cells on EE, SLA, and M surfaces. Both adhesion rate and proliferation level on EE surface are higher than those on SLA and M surfaces. Therefore, we may expect that, comparing with SLA and M surfaces, bone growth on EE surface could be accelerated and bone formation could be promoted at an early stage, which could be applied in the clinical practices for immediate and early-stage loadings.

  18. An ambiguity principle for assigning protein structural domains

    Science.gov (United States)

    Postic, Guillaume; Ghouzam, Yassine; Chebrek, Romain; Gelly, Jean-Christophe

    2017-01-01

    Ambiguity is the quality of being open to several interpretations. For an image, it arises when the contained elements can be delimited in two or more distinct ways, which may cause confusion. We postulate that it also applies to the analysis of protein three-dimensional structure, which consists in dividing the molecule into subunits called domains. Because different definitions of what constitutes a domain can be used to partition a given structure, the same protein may have different but equally valid domain annotations. However, knowledge and experience generally displace our ability to accept more than one way to decompose the structure of an object—in this case, a protein. This human bias in structure analysis is particularly harmful because it leads to ignoring potential avenues of research. We present an automated method capable of producing multiple alternative decompositions of protein structure (web server and source code available at www.dsimb.inserm.fr/sword/). Our innovative algorithm assigns structural domains through the hierarchical merging of protein units, which are evolutionarily preserved substructures that describe protein architecture at an intermediate level, between domain and secondary structure. To validate the use of these protein units for decomposing protein structures into domains, we set up an extensive benchmark made of expert annotations of structural domains and including state-of-the-art domain parsing algorithms. The relevance of our “multipartitioning” approach is shown through numerous examples of applications covering protein function, evolution, folding, and structure prediction. Finally, we introduce a measure for the structural ambiguity of protein molecules. PMID:28097215

  19. An ambiguity principle for assigning protein structural domains.

    Science.gov (United States)

    Postic, Guillaume; Ghouzam, Yassine; Chebrek, Romain; Gelly, Jean-Christophe

    2017-01-01

    Ambiguity is the quality of being open to several interpretations. For an image, it arises when the contained elements can be delimited in two or more distinct ways, which may cause confusion. We postulate that it also applies to the analysis of protein three-dimensional structure, which consists in dividing the molecule into subunits called domains. Because different definitions of what constitutes a domain can be used to partition a given structure, the same protein may have different but equally valid domain annotations. However, knowledge and experience generally displace our ability to accept more than one way to decompose the structure of an object-in this case, a protein. This human bias in structure analysis is particularly harmful because it leads to ignoring potential avenues of research. We present an automated method capable of producing multiple alternative decompositions of protein structure (web server and source code available at www.dsimb.inserm.fr/sword/). Our innovative algorithm assigns structural domains through the hierarchical merging of protein units, which are evolutionarily preserved substructures that describe protein architecture at an intermediate level, between domain and secondary structure. To validate the use of these protein units for decomposing protein structures into domains, we set up an extensive benchmark made of expert annotations of structural domains and including state-of-the-art domain parsing algorithms. The relevance of our "multipartitioning" approach is shown through numerous examples of applications covering protein function, evolution, folding, and structure prediction. Finally, we introduce a measure for the structural ambiguity of protein molecules.

  20. Evolution studied through protein structural domains

    OpenAIRE

    YANG, SONG

    2007-01-01

    A protein structural domain is defined as a compact, spatially distinct part of a protein that can fold independently of neighboring sequences. Since the number of protein domains is limited, and protein domains are evolutionarily more conserved than protein sequences, protein domains play an important role in our understanding of the structure, function and evolution of proteins. As fundamental evolutionary units, protein domains are associated with a variety of evolutionary processes such a...

  1. Towards Domain Ontology Creation Based on a Taxonomy Structure in Computer Vision

    Directory of Open Access Journals (Sweden)

    Sadgal mohamed

    2016-02-01

    Full Text Available In computer vision to create a knowledge base usable by information systems, we need a data structure facilitating the information access. Artificial intelligence community uses the ontologies to structure and represent the domain knowledge. This information structure can be used as a database of many geographic information systems (GIS or information systems treating real objects for example road scenes, besides it can be utilized by other systems. For this, we provide a process to create a taxonomy structure based on new hierarchical image clustering method. The hierarchical relation is based on visual object features and contributes to build domain ontology.

  2. Hierarchical structure of moral stages assessed by a sorting task.

    Science.gov (United States)

    Boom, J; Brugman, D; van der Heijden, P G

    2001-01-01

    Following criticism of Kohlberg's theory of moral judgment, an empirical re-examination of hierarchical stage structure was desirable. Utilizing Piaget's concept of reflective abstraction as a basis, the hierarchical stage structure was investigated using a new method. Study participants (553 Dutch university students and 196 Russian high school students) sorted statements in terms of moral sophistication. These statements were typical for the different stages of moral development as defined in Colby and Kohlberg. The rank ordering performed by participants confirmed the hypotheses. First, despite large individual variation, the ordering of the statements that gave the best fit revealed that each consecutive Kohlbergian stage was perceived to be more morally sophisticated. Second, the lower the stage as represented by the items, the higher the agreement among the participants in their ranking; and the higher the stage as represented by the items, the lower the agreement among the participants in the rankings. Moreover, the pivotal point depended on the developmental characteristics of the sample, which demonstrated a developmental effect: The ordering of statements representative of moral stages below one's own current stage was straightforward, whereas the ordering of statements above one's own stage was difficult. It was concluded that the Piagetian idea of reflective abstraction can be used successfully to operationalize and measure the hierarchical nature of moral development.

  3. Hierarchical structuring of liquid crystal polymer-Laponite hybrid materials.

    Science.gov (United States)

    Tritschler, Ulrich; Zlotnikov, Igor; Zaslansky, Paul; Aichmayer, Barbara; Fratzl, Peter; Schlaad, Helmut; Cölfen, Helmut

    2013-09-03

    Biomimetic organic-inorganic composite materials were fabricated via one-step self-organization on three hierarchical levels. The organic component was a polyoxazoline with pendent cholesteryl and carboxyl (N-Boc-protected amino acid) side chains that was able to form a chiral nematic lyotropic phase and bind to positively charged inorganic faces of Laponite. The Laponite particles formed a mesocrystalline arrangement within the liquid-crystal (LC) polymer phase upon shearing a viscous dispersion of Laponite nanoparticles and LC polymer in DMF. Complementary analytical and mechanical characterization techniques (AUC, POM, TEM, SEM, SAXS, μCT, and nanoindentation) covering the millimeter, micrometer, and nanometer length scales reveal the hierarchical structures and properties of the composite materials consisting of different ratios of Laponite nanoparticles and liquid-crystalline polymer.

  4. Study on Hierarchical Structure of Detailed Control Planning

    Institute of Scientific and Technical Information of China (English)

    2010-01-01

    Using case studies,this paper analyzes the characteristics of detailed control planning and its hierarchical controls,the form and composition of plan content,and methodological innovations.It then suggests improvements to the planning structure that are oriented at adaptability,fairness,centrality,and scientific principles with regard to the content,methods,and results of the planning.Regarding the hierarchical control system,the paper suggests that the detailed control plan should be composed of "block planning" and "plot planning".It is believed that through a combination of block and plot planning,the problem of joining long-term and short-term planning will be solved and it will be possible to address the need for adjustment and revision of detailed control plan.

  5. An interference cancellation strategy for broadcast in hierarchical cell structure

    KAUST Repository

    Yang, Yuli

    2014-12-01

    In this paper, a hierarchical cell structure is considered, where public safety broadcasting is fulfilled in a femtocell located within a macrocell. In the femtocell, also known as local cell, an access point broadcasts to each local node (LN) over an orthogonal frequency sub-band independently. Since the local cell shares the spectrum licensed to the macrocell, a given LN is interfered by transmissions of the macrocell user (MU) in the same sub-band. To improve the broadcast performance in the local cell, a novel scheme is proposed to mitigate the interference from the MU to the LN while achieving diversity gain. For the sake of performance evaluation, ergodic capacity of the proposed scheme is quantified and a corresponding closed-form expression is obtained. By comparing with the traditional scheme that suffers from the MU\\'s interference, numerical results substantiate the advantage of the proposed scheme and provide a useful tool for the broadcast design in hierarchical cell systems.

  6. A Method to Examine Content Domain Structures

    Science.gov (United States)

    D'Agostino, Jerome; Karpinski, Aryn; Welsh, Megan

    2011-01-01

    After a test is developed, most content validation analyses shift from ascertaining domain definition to studying domain representation and relevance because the domain is assumed to be set once a test exists. We present an approach that allows for the examination of alternative domain structures based on extant test items. In our example based on…

  7. Gene function prediction based on the Gene Ontology hierarchical structure.

    Science.gov (United States)

    Cheng, Liangxi; Lin, Hongfei; Hu, Yuncui; Wang, Jian; Yang, Zhihao

    2014-01-01

    The information of the Gene Ontology annotation is helpful in the explanation of life science phenomena, and can provide great support for the research of the biomedical field. The use of the Gene Ontology is gradually affecting the way people store and understand bioinformatic data. To facilitate the prediction of gene functions with the aid of text mining methods and existing resources, we transform it into a multi-label top-down classification problem and develop a method that uses the hierarchical relationships in the Gene Ontology structure to relieve the quantitative imbalance of positive and negative training samples. Meanwhile the method enhances the discriminating ability of classifiers by retaining and highlighting the key training samples. Additionally, the top-down classifier based on a tree structure takes the relationship of target classes into consideration and thus solves the incompatibility between the classification results and the Gene Ontology structure. Our experiment on the Gene Ontology annotation corpus achieves an F-value performance of 50.7% (precision: 52.7% recall: 48.9%). The experimental results demonstrate that when the size of training set is small, it can be expanded via topological propagation of associated documents between the parent and child nodes in the tree structure. The top-down classification model applies to the set of texts in an ontology structure or with a hierarchical relationship.

  8. A stochastic model for detecting overlapping and hierarchical community structure.

    Directory of Open Access Journals (Sweden)

    Xiaochun Cao

    Full Text Available Community detection is a fundamental problem in the analysis of complex networks. Recently, many researchers have concentrated on the detection of overlapping communities, where a vertex may belong to more than one community. However, most current methods require the number (or the size of the communities as a priori information, which is usually unavailable in real-world networks. Thus, a practical algorithm should not only find the overlapping community structure, but also automatically determine the number of communities. Furthermore, it is preferable if this method is able to reveal the hierarchical structure of networks as well. In this work, we firstly propose a generative model that employs a nonnegative matrix factorization (NMF formulization with a l(2,1 norm regularization term, balanced by a resolution parameter. The NMF has the nature that provides overlapping community structure by assigning soft membership variables to each vertex; the l(2,1 regularization term is a technique of group sparsity which can automatically determine the number of communities by penalizing too many nonempty communities; and hence the resolution parameter enables us to explore the hierarchical structure of networks. Thereafter, we derive the multiplicative update rule to learn the model parameters, and offer the proof of its correctness. Finally, we test our approach on a variety of synthetic and real-world networks, and compare it with some state-of-the-art algorithms. The results validate the superior performance of our new method.

  9. Hierarchical optimisation on scissor seat suspension characteristic and structure

    Science.gov (United States)

    Wang, Chunlei; Zhang, Xinjie; Guo, Konghui; Lv, Jiming; Yang, Yi

    2016-11-01

    Scissor seat suspension has been applied widely to attenuate the cab vibrations of commercial vehicles, while its design generally needs a trade-off between the seat acceleration and suspension travel, which creates a typical optimisation issue. A complexity for this issue is that the optimal dynamics parameters are not easy to approach solutions fast and unequivocally. Hence, the hierarchical optimisation on scissor seat suspension characteristic and structure is proposed, providing a top-down methodology with the globally optimal and fast convergent solutions to compromise these design contradictions. In details, a characteristic-oriented non-parametric dynamics model of the scissor seat suspension is formulated firstly via databases, describing its vertical dynamics accurately. Then, the ideal vertical stiffness-damping characteristic is cascaded via the characteristic-oriented model, and the structure parameters are optimised in accordance with a structure-oriented multi-body dynamics model of the scissor seat suspension. Eventually, the seat effective amplitude transmissibility factor, suspension travel and the CPU time for solving are evaluated. The results show the seat suspension performance and convergent speed of the globally optimal solutions are improved well. Hence, the proposed hierarchical optimisation methodology regarding characteristic and structure of the scissor seat suspension is promising for its virtual development.

  10. Connectivity independent protein-structure alignment: a hierarchical approach

    Directory of Open Access Journals (Sweden)

    Schmidt-Goenner Tobias

    2006-11-01

    Full Text Available Abstract Background Protein-structure alignment is a fundamental tool to study protein function, evolution and model building. In the last decade several methods for structure alignment were introduced, but most of them ignore that structurally similar proteins can share the same spatial arrangement of secondary structure elements (SSE but differ in the underlying polypeptide chain connectivity (non-sequential SSE connectivity. Results We perform protein-structure alignment using a two-level hierarchical approach implemented in the program GANGSTA. On the first level, pair contacts and relative orientations between SSEs (i.e. α-helices and β-strands are maximized with a genetic algorithm (GA. On the second level residue pair contacts from the best SSE alignments are optimized. We have tested the method on visually optimized structure alignments of protein pairs (pairwise mode and for database scans. For a given protein structure, our method is able to detect significant structural similarity of functionally important folds with non-sequential SSE connectivity. The performance for structure alignments with strictly sequential SSE connectivity is comparable to that of other structure alignment methods. Conclusion As demonstrated for several applications, GANGSTA finds meaningful protein-structure alignments independent of the SSE connectivity. GANGSTA is able to detect structural similarity of protein folds that are assigned to different superfamilies but nevertheless possess similar structures and perform related functions, even if these proteins differ in SSE connectivity.

  11. Numerical analysis on mechanical behaviors of hierarchical cellular structures with negative Poisson’s ratio

    Science.gov (United States)

    Li, Dong; Yin, Jianhua; Dong, Liang; Lakes, Roderic S.

    2017-02-01

    Two-dimensional hierarchical re-entrant honeycomb structures were designed and the mechanical behaviors of the structures were studied using a finite element method. Hierarchical re-entrant structure of order n (n ≥ 1) was constructed by replacing each vertex of a lower order (n - 1) hierarchical re-entrant structure with a smaller re-entrant hexagon with identical strut aspect ratio. The Poisson’s ratio and energy absorption capacity of re-entrant structures of different hierarchical orders were studied under different compression velocities. The results showed that the Poisson’s ratio of the first and second order hierarchical structures can reach -1.36 and -1.33 with appropriate aspect ratio, 13.8% and 12.1% lower than that of the zeroth order hierarchical structure. The energy absorption capacity of the three models increased with an increasing compression velocity; the second order hierarchical structure exhibited the highest rate of increase in energy absorption capacity with an increasing compression velocity. The plateau stresses of the first and second order hierarchical structures were slightly lower than that of the zeroth order hierarchical structure; however the second order hierarchical structure exhibited the highest energy absorption capacity at high compression velocity (60 m s-1).

  12. Analysis of stability of community structure across multiple hierarchical levels

    CERN Document Server

    Li, Hui-Jia

    2015-01-01

    The analysis of stability of community structure is an important problem for scientists from many fields. Here, we propose a new framework to reveal hidden properties of community structure by quantitatively analyzing the dynamics of Potts model. Specifically we model the Potts procedure of community structure detection by a Markov process, which has a clear mathematical explanation. Critical topological information regarding to multivariate spin configuration could also be inferred from the spectral significance of the Markov process. We test our framework on some example networks and find it doesn't have resolute limitation problem at all. Results have shown the model we proposed is able to uncover hierarchical structure in different scales effectively and efficiently.

  13. Self-Concepts in Reading, Writing, Listening, and Speaking: A Multidimensional and Hierarchical Structure and Its Generalizability across Native and Foreign Languages

    Science.gov (United States)

    Arens, A. Katrin; Jansen, Malte

    2016-01-01

    Academic self-concept has been conceptualized as a multidimensional and hierarchical construct. Previous research has mostly focused on its multidimensionality, distinguishing between verbal and mathematical self-concept domains, and only a few studies have examined the factorial structure within specific self-concept domains. The present study…

  14. A mechanism for the cortical computation of hierarchical linguistic structure.

    Science.gov (United States)

    Martin, Andrea E; Doumas, Leonidas A A

    2017-03-01

    Biological systems often detect species-specific signals in the environment. In humans, speech and language are species-specific signals of fundamental biological importance. To detect the linguistic signal, human brains must form hierarchical representations from a sequence of perceptual inputs distributed in time. What mechanism underlies this ability? One hypothesis is that the brain repurposed an available neurobiological mechanism when hierarchical linguistic representation became an efficient solution to a computational problem posed to the organism. Under such an account, a single mechanism must have the capacity to perform multiple, functionally related computations, e.g., detect the linguistic signal and perform other cognitive functions, while, ideally, oscillating like the human brain. We show that a computational model of analogy, built for an entirely different purpose-learning relational reasoning-processes sentences, represents their meaning, and, crucially, exhibits oscillatory activation patterns resembling cortical signals elicited by the same stimuli. Such redundancy in the cortical and machine signals is indicative of formal and mechanistic alignment between representational structure building and "cortical" oscillations. By inductive inference, this synergy suggests that the cortical signal reflects structure generation, just as the machine signal does. A single mechanism-using time to encode information across a layered network-generates the kind of (de)compositional representational hierarchy that is crucial for human language and offers a mechanistic linking hypothesis between linguistic representation and cortical computation.

  15. Colloidal quantum dot solar cells exploiting hierarchical structuring

    KAUST Repository

    Labelle, André J.

    2015-02-11

    Extremely thin-absorber solar cells offer low materials utilization and simplified manufacture but require improved means to enhance photon absorption in the active layer. Here, we report enhanced-absorption colloidal quantum dot (CQD) solar cells that feature transfer-stamped solution-processed pyramid-shaped electrodes employed in a hierarchically structured device. The pyramids increase, by up to a factor of 2, the external quantum efficiency of the device at absorption-limited wavelengths near the absorber band edge. We show that absorption enhancement can be optimized with increased pyramid angle with an appreciable net improvement in power conversion efficiency, that is, with the gain in current associated with improved absorption and extraction overcoming the smaller fractional decrease in open-circuit voltage associated with increased junction area. We show that the hierarchical combination of micron-scale structured electrodes with nanoscale films provides for an optimized enhancement at absorption-limited wavelengths. We fabricate 54.7° pyramid-patterned electrodes, conformally apply the quantum dot films, and report pyramid CQD solar cells that exhibit a 24% improvement in overall short-circuit current density with champion devices providing a power conversion efficiency of 9.2%.

  16. A mechanism for the cortical computation of hierarchical linguistic structure

    Science.gov (United States)

    Doumas, Leonidas A. A.

    2017-01-01

    Biological systems often detect species-specific signals in the environment. In humans, speech and language are species-specific signals of fundamental biological importance. To detect the linguistic signal, human brains must form hierarchical representations from a sequence of perceptual inputs distributed in time. What mechanism underlies this ability? One hypothesis is that the brain repurposed an available neurobiological mechanism when hierarchical linguistic representation became an efficient solution to a computational problem posed to the organism. Under such an account, a single mechanism must have the capacity to perform multiple, functionally related computations, e.g., detect the linguistic signal and perform other cognitive functions, while, ideally, oscillating like the human brain. We show that a computational model of analogy, built for an entirely different purpose—learning relational reasoning—processes sentences, represents their meaning, and, crucially, exhibits oscillatory activation patterns resembling cortical signals elicited by the same stimuli. Such redundancy in the cortical and machine signals is indicative of formal and mechanistic alignment between representational structure building and “cortical” oscillations. By inductive inference, this synergy suggests that the cortical signal reflects structure generation, just as the machine signal does. A single mechanism—using time to encode information across a layered network—generates the kind of (de)compositional representational hierarchy that is crucial for human language and offers a mechanistic linking hypothesis between linguistic representation and cortical computation. PMID:28253256

  17. On the structure of order domains

    DEFF Research Database (Denmark)

    Geil, Olav; Pellikaan, Ruud

    2002-01-01

    The notion of an order domain is generalized. The behaviour of an order domain by taking a subalgebra, the extension of scalars, and the tensor product is studied. The relation of an order domain with valuation theory, Gröbner algebras, and graded structures is given. The theory of Gröbner bases ...

  18. HD-RNAS: An automated hierarchical database of RNA structures

    Directory of Open Access Journals (Sweden)

    Shubhra Sankar eRay

    2012-04-01

    Full Text Available One of the important goals of most biological investigations is to classify and organize the experimental findings so that they are readily useful for deriving generalized rules. Although there is a huge amount of information on RNA structures in PDB, there are redundant files, ambiguous synthetic sequences etc. Moreover, a systematic hierarchical organization, reflecting RNA classification, is missing in PDB. In this investigation, we have classified all the available RNA crystal structures from PDB through a programmatic approach. Hence, it would be now a simple assignment to regularly update the classification as and when new structures are released. The classification can further determine (i a non-redundant set of RNA structures and (ii if available, a set of structures of identical sequence and function, which can highlight structural polymorphism, ligand-induced conformational alterations etc. Presently, we have classified the available structures (2095 PDB entries having RNA chain longer than 9 nucleotides solved by X-ray crystallography or NMR spectroscopy into nine functional classes. The structures of same function and same source are mostly seen to be similar with subtle differences depending on their functional complexation. The web-server is available online at http://www.saha.ac.in/biop/www/HD-RNAS.html and is updated regularly.

  19. Motion Tree Delineates Hierarchical Structure of Protein Dynamics Observed in Molecular Dynamics Simulation.

    Directory of Open Access Journals (Sweden)

    Kei Moritsugu

    Full Text Available Molecular dynamics (MD simulations of proteins provide important information to understand their functional mechanisms, which are, however, likely to be hidden behind their complicated motions with a wide range of spatial and temporal scales. A straightforward and intuitive analysis of protein dynamics observed in MD simulation trajectories is therefore of growing significance with the large increase in both the simulation time and system size. In this study, we propose a novel description of protein motions based on the hierarchical clustering of fluctuations in the inter-atomic distances calculated from an MD trajectory, which constructs a single tree diagram, named a "Motion Tree", to determine a set of rigid-domain pairs hierarchically along with associated inter-domain fluctuations. The method was first applied to the MD trajectory of substrate-free adenylate kinase to clarify the usefulness of the Motion Tree, which illustrated a clear-cut dynamics picture of the inter-domain motions involving the ATP/AMP lid and the core domain together with the associated amplitudes and correlations. The comparison of two Motion Trees calculated from MD simulations of ligand-free and -bound glutamine binding proteins clarified changes in inherent dynamics upon ligand binding appeared in both large domains and a small loop that stabilized ligand molecule. Another application to a huge protein, a multidrug ATP binding cassette (ABC transporter, captured significant increases of fluctuations upon binding a drug molecule observed in both large scale inter-subunit motions and a motion localized at a transmembrane helix, which may be a trigger to the subsequent structural change from inward-open to outward-open states to transport the drug molecule. These applications demonstrated the capabilities of Motion Trees to provide an at-a-glance view of various sizes of functional motions inherent in the complicated MD trajectory.

  20. Emergence of hierarchical structural complexities in nanoparticles and their assembly

    Science.gov (United States)

    Zeng, Chenjie; Chen, Yuxiang; Kirschbaum, Kristin; Lambright, Kelly J.; Jin, Rongchao

    2016-12-01

    We demonstrate that nanoparticle self-assembly can reach the same level of hierarchy, complexity, and accuracy as biomolecules. The precise assembly structures of gold nanoparticles (246 gold core atoms with 80 p-methylbenzenethiolate surface ligands) at the atomic, molecular, and nanoscale levels were determined from x-ray diffraction studies. We identified the driving forces and rules that guide the multiscale assembly behavior. The protecting ligands self-organize into rotational and parallel patterns on the nanoparticle surface via C-Hṡṡṡπ interaction, and the symmetry and density of surface patterns dictate directional packing of nanoparticles into crystals with orientational, rotational, and translational orders. Through hierarchical interactions and symmetry matching, the simple building blocks evolve into complex structures, representing an emergent phenomenon in the nanoparticle system.

  1. Genomic analysis of the hierarchical structure of regulatory networks

    Science.gov (United States)

    Yu, Haiyuan; Gerstein, Mark

    2006-01-01

    A fundamental question in biology is how the cell uses transcription factors (TFs) to coordinate the expression of thousands of genes in response to various stimuli. The relationships between TFs and their target genes can be modeled in terms of directed regulatory networks. These relationships, in turn, can be readily compared with commonplace “chain-of-command” structures in social networks, which have characteristic hierarchical layouts. Here, we develop algorithms for identifying generalized hierarchies (allowing for various loop structures) and use these approaches to illuminate extensive pyramid-shaped hierarchical structures existing in the regulatory networks of representative prokaryotes (Escherichia coli) and eukaryotes (Saccharomyces cerevisiae), with most TFs at the bottom levels and only a few master TFs on top. These masters are situated near the center of the protein–protein interaction network, a different type of network from the regulatory one, and they receive most of the input for the whole regulatory hierarchy through protein interactions. Moreover, they have maximal influence over other genes, in terms of affecting expression-level changes. Surprisingly, however, TFs at the bottom of the regulatory hierarchy are more essential to the viability of the cell. Finally, one might think master TFs achieve their wide influence through directly regulating many targets, but TFs with most direct targets are in the middle of the hierarchy. We find, in fact, that these midlevel TFs are “control bottlenecks” in the hierarchy, and this great degree of control for “middle managers” has parallels in efficient social structures in various corporate and governmental settings. PMID:17003135

  2. Hybrid Direct Write Lithographic Strategies for Complex Hierarchical Structures

    Science.gov (United States)

    Singer, Jonathan P.

    With the number of alternative lithographic techniques for high resolution and 3D patterning rapidly increasing, there is a need to identify a set of scalable techniques which balances the ability to arbitrarily control every detail of a target pattern and to produce these complex patterns at a high rate. It is in this way that metamaterial devices put forward on a lab scale for applications such as phononics, photonics, and plasmonics can be realized in the industrial scale. This thesis, in approaching this challenge, utilizes combinations of patterning techniques, leveraging the ability for "large" scale alternative lithographic techniques, such as interference lithography or self-assembly, to create the same nanostructured morphology over a large area combined with laser direct write. The process of drawing a single line or isolated voxel can result in a hierarchical pattern defined by the latent motif of the larger-scale technique. The net resuh is to shift the burden of high resolution patterning from the direct write to the large scale technique, effectively decoupling the correlation between the level of detail and the patterning speed and control. More specifically, the following combinations with laser direct writing were investigated: (1) proximity field nanopatterning for the predefinition of diffraction-order-defined 3D resonators which were applied as "stand-up" plasmodic microresonators, (2) dewetting to conduct development-free 2D patterning of isolated sub-micron lines, and, via overlap effects, nanoscale ( <1 00 nm) gratings, (3) block copolymer self-assembly to initiate the simultaneous annealing and alignment of near-equilibrium microdomains from a metastable starting morphology, and (4) interference lithography to fabricate 3D sub-micron periodic and quasiperiodic hierarchical structures with controllable positioning and tunable fill fraction that has potential for applications to microphotonics. In conjunction with the experimental components

  3. Nonstationary Interference Excision in Time-Frequency Domain Using Adaptive Hierarchical Lapped Orthogonal Transform for Direct Sequence Spread Spectrum Communications

    Directory of Open Access Journals (Sweden)

    Zhu Yi-Sheng

    2003-01-01

    Full Text Available An adaptive hierarchical lapped orthogonal transform (HLOT exciser is proposed for tracking, localizing, and rejecting the nonstationary interference in direct sequence spread spectrum (DSSS communications. The method is based on HLOT. It utilizes a fast dynamic programming algorithm to search for the best basis, which matches the interference structure best, in a library of lapped orthogonal bases. The adaptive HLOT differs from conventional block transform and the more advanced modulated lapped transform (MLT in that the former produces arbitrary time-frequency tiling, which can be adapted to the signal structure, while the latter yields fixed tilings. The time-frequency tiling of the adaptive HLOT can be time varying, so it is also able to track the variations of the signal time-frequency structure. Simulation results show that the proposed exciser brings significant performance improvement in the presence of nonstationary time-localized interference with or without instantaneous frequency (IF information compared with the existing block transform domain excisers. Also, the proposed exciser is effective in suppressing narrowband interference and combined narrowband and time-localized impulsive interference.

  4. The structure of dark matter halos in hierarchical clustering theories

    CERN Document Server

    Subramanian, K; Ostriker, J P; Subramanian, Kandaswamy; Cen, Renyue; Ostriker, Jeremiah P.

    1999-01-01

    During hierarchical clustering, smaller masses generally collapse earlier than larger masses and so are denser on the average. The core of a small mass halo could be dense enough to resist disruption and survive undigested, when it is incorporated into a bigger object. We explore the possibility that a nested sequence of undigested cores in the center of the halo, which have survived the hierarchical, inhomogeneous collapse to form larger and larger objects, determines the halo structure in the inner regions. For a flat universe with $P(k) \\propto k^n$, scaling arguments then suggest that the core density profile is, $\\rho \\propto r^{-\\alpha}$ with $\\alpha = (9+3n)/(5+n)$. But whether such behaviour obtains depends on detailed dynamics. We first examine the dynamics using a fluid approach to the self-similar collapse solutions for the dark matter phase space density, including the effect of velocity dispersions. We highlight the importance of tangential velocity dispersions to obtain density profiles shallowe...

  5. Mesopore quality determines the lifetime of hierarchically structured zeolite catalysts

    Science.gov (United States)

    Milina, Maria; Mitchell, Sharon; Crivelli, Paolo; Cooke, David; Pérez-Ramírez, Javier

    2014-05-01

    Deactivation due to coking limits the lifetime of zeolite catalysts in the production of chemicals and fuels. Superior performance can be achieved through hierarchically structuring the zeolite porosity, yet no relation has been established between the mesopore architecture and the catalyst lifetime. Here we introduce a top-down demetallation strategy to locate mesopores in different regions of MFI-type crystals with identical bulk porous and acidic properties. In contrast, well-established bottom-up strategies as carbon templating and seed silanization fail to yield materials with matching characteristics. Advanced characterization tools capable of accurately discriminating the mesopore size, distribution and connectivity are applied to corroborate the concept of mesopore quality. Positron annihilation lifetime spectroscopy proves powerful to quantify the global connectivity of the intracrystalline pore network, which, as demonstrated in the conversions of methanol or of propanal to hydrocarbons, is closely linked to the lifetime of zeolite catalysts. The findings emphasize the need to aptly tailor hierarchical materials for maximal catalytic advantage.

  6. Uncovering hierarchical data structure in single molecule transport

    Science.gov (United States)

    Wu, Ben H.; Ivie, Jeffrey A.; Johnson, Tyler K.; Monti, Oliver L. A.

    2017-03-01

    Interpretation of single molecule transport data is complicated by the fact that all such data are inherently highly stochastic in nature. Features are often broad, seemingly unstructured and distributed over more than an order of magnitude. However, the distribution contains information necessary for capturing the full variety of processes relevant in nanoscale transport, and a better understanding of its hierarchical structure is needed to gain deeper insight into the physics and chemistry of single molecule electronics. Here, we describe a novel data analysis approach based on hierarchical clustering to aid in the interpretation of single molecule conductance-displacement histograms. The primary purpose of statistically partitioning transport data is to provide avenues for unbiased hypothesis generation in single molecule break junction experiments by revealing otherwise potentially hidden aspects in the conductance data. Our approach is generalizable to the analysis of a wide variety of other single molecule experiments in molecular electronics, as well as in single molecule fluorescence spectroscopy, force microscopy, and ion-channel conductance measurements.

  7. Nanowire-based polypyrrole hierarchical structures synthesized by a two-step electrochemical method.

    Science.gov (United States)

    Ge, Dongtao; Huang, Sanqing; Qi, Rucai; Mu, Jing; Shen, Yuqing; Shi, Wei

    2009-08-03

    A simple two-step electrochemical method is proposed for the synthesis of nanowire-based polypyrrole hierarchical structures. In the first step, microstructured polypyrrole films are prepared by electropolymerization. Then, polypyrrole nanowires are electrodeposited on the surface of the as-synthesized microstructured polypyrrole films. As a result, hierarchical structures of polypyrrole nanowires on polypyrrole microstructures are obtained. The surface wettabilities of the resulting nanowire-based polypyrrole hierarchical structures are examined. It is expected that this two-step method can be developed into a versatile route to produce nanowire-based polypyrrole hierarchical structures with different morphologies and surface properties.

  8. YAP-mediated mechanotransduction regulates osteogenic and adipogenic differentiation of BMSCs on hierarchical structure.

    Science.gov (United States)

    Pan, Houhua; Xie, Youtao; Zhang, Zequan; Li, Kai; Hu, Dandan; Zheng, Xuebin; Fan, Qiming; Tang, Tingting

    2017-04-01

    Hierarchical structure mimicking the natural bone microenvironment has been considered as a promising platform to regulate cell functions. We have previously fabricated hierarchical macropore/nanowire structure and evidence has shown that it can better manipulate the cytoskeleton status and osteogenic performance of osteoblasts. However, how cues of hierarchical structure are translated and ultimately linked to BMSC lineage commitment have still remained elusive, which hinders the accurate knowledge and further development of the hierarchical structure. In this study, bone marrow-derived mesenchymal stem cells (BMSCs) fate on hierarchical structure was investigated as well as the detailed mechanisms. It was shown that well-developed cytoskeleton and focal adhesion were observed for BMSCs on hierarchical structure, which was accompanied by enhanced osteogenic and depressed adipogenic potential. Evidence of increased YAP activity and nuclear translocation were exhibited on hierarchical structure and YAP knockdown inhibited osteogenic differentiation and promoted adipogenic differentiation induced by hierarchical structure. Further remove of cytoskeleton tension inhibited YAP function, which confirmed the key role of YAP-mediated mechanotransduction in the BMSC differentiation. These results together provide information of the stem cell fate commitment on hierarchical structure and a promising approach to design advanced biomaterials by focusing on specific mechanotransduction process.

  9. Hierarchical Structure in Semicrystalline Polymers Tethered to Nanospheres

    KAUST Repository

    Kim, Sung A

    2014-01-28

    We report on structural and dynamic transitions of polymers tethered to nanoparticles. In particular, we use X-ray diffraction, vibrational spectroscopy, and thermal measurements to investigate multiscale structure and dynamic transitions of poly(ethylene glycol) (PEG) chains densely grafted to SiO2 nanoparticles. The approach used for synthesizing these hybrid particles leads to homogeneous SiO2-PEG composites with polymer grafting densities as high as 1.5 chains/nm2, which allows the hybrid materials to exist as self-suspended suspensions with distinct hierarchical structure and thermal properties. On angstrom and nanometer length scales, the tethered PEG chains exhibit more dominant TTG conformations and helix unit cell structure, in comparison to the untethered polymer. The nanoparticle tethered PEG chains are also reported to form extended crystallites on tens of nanometers length scales and to exhibit more stable crystalline structure on small dimensions. On length scales comparable to the size of each hybrid SiO 2-PEG unit, the materials are amorphous presumably as a result of the difficulty fitting the nanoparticle anchors into the PEG crystal lattice. This structural change produces large effects on the thermal transitions of PEG molecules tethered to nanoparticles. © 2014 American Chemical Society.

  10. Robust Face Recognition by Hierarchical Kernel Associative Memory Models Based on Spatial Domain Gabor Transforms

    Directory of Open Access Journals (Sweden)

    Bai-ling Zhang

    2006-07-01

    Full Text Available Face recognition can be studied as an associative memory (AM problem and kernel-based AM models have been proven efficient. In this paper, a hierarchical Kernel Associative Memory (KAM face recognition scheme with a multiscale Gabor transform, is proposed. The pyramidal multiscale Gabor decomposition proposed by Nestares, Navarro, Portilla and Tabernero not only provides a very efficient implementation of the Gabor transform in the spatial domain, but also permits a fast reconstruction of images. In our method, face images of each person are first decomposed into their multiscale representations by a quasicomplete Gabor transform, which are then modelled by Kernel Associative Memories. In the recognition stage, a query face image is also represented by a Gabor multiresolution pyramid and the reconstructions from different KAM models corresponding to even Gabor channels are then simply summed to give the recall. The recognition scheme was thoroughly tested using several benchmarking face datasets, including the AR faces, UMIST faces, JAFFE faces and Yale A faces, which include different kind of face variations from occlusions, pose, expression and illumination. The experiment results show that the proposed method demonstrated strong robustness in recognizing faces under different conditions, particularly under occlusions, pose alterations and expression changes.

  11. Hierarchical Sets: Analyzing Pangenome Structure through Scalable Set Visualizations

    DEFF Research Database (Denmark)

    Pedersen, Thomas Lin

    2017-01-01

    The increase in available microbial genome sequences has resulted in an increase in the size of the pangenomes being analyzed. Current pangenome visualizations are not intended for the pangenome sizes possible today and new approaches are necessary in order to convert the increase in available...... information to increase in knowledge. As the pangenome data structure is essentially a collection of sets we explore the potential for scalable set visualization as a tool for pangenome analysis. We present a new hierarchical clustering algorithm based on set arithmetics that optimizes the intersection sizes...... along the branches. The intersection and union sizes along the hierarchy are visualized using a composite dendrogram and icicle plot, which, in pangenome context, shows the evolution of pangenome and core size along the evolutionary hierarchy. Outlying elements, i.e. elements whose presence pattern do...

  12. Tensegrity I. Cell structure and hierarchical systems biology

    Science.gov (United States)

    Ingber, Donald E.

    2003-01-01

    In 1993, a Commentary in this journal described how a simple mechanical model of cell structure based on tensegrity architecture can help to explain how cell shape, movement and cytoskeletal mechanics are controlled, as well as how cells sense and respond to mechanical forces (J. Cell Sci. 104, 613-627). The cellular tensegrity model can now be revisited and placed in context of new advances in our understanding of cell structure, biological networks and mechanoregulation that have been made over the past decade. Recent work provides strong evidence to support the use of tensegrity by cells, and mathematical formulations of the model predict many aspects of cell behavior. In addition, development of the tensegrity theory and its translation into mathematical terms are beginning to allow us to define the relationship between mechanics and biochemistry at the molecular level and to attack the larger problem of biological complexity. Part I of this two-part article covers the evidence for cellular tensegrity at the molecular level and describes how this building system may provide a structural basis for the hierarchical organization of living systems--from molecule to organism. Part II, which focuses on how these structural networks influence information processing networks, appears in the next issue.

  13. The fragmentation and stability of hierarchical structure in Serpens South

    CERN Document Server

    Friesen, R K; Di Francesco, J; Gutermuth, R; Myers, P C

    2016-01-01

    Filamentary structures are ubiquitous in molecular clouds, and have been recently argued to play an important role in regulating the size and mass of embedded clumps through fragmentation and mass accretion. Here, we reveal the dynamical state and fragmentation of filamentary molecular gas associated with the Serpens South protocluster through analysis of wide (~4 x 4 pc) observations of NH3 (1,1) and (2,2) inversion transitions with the Green Bank Telescope. Detailed modeling of the NH3 lines reveals that the kinematics of the cluster and surrounding filaments are complex. We identify hierarchical structure using a dendrogram analysis of the NH3 emission. The distance between neighbour structures that are embedded within the same parent structure is generally greater than expected from a spherical Jeans analysis, and is in better agreement with cylindrical fragmentation models. The NH3 line width-size relation is flat, and average gas motions are sub- or trans-sonic over all physical scales observed. Subsoni...

  14. Tensegrity I. Cell structure and hierarchical systems biology

    Science.gov (United States)

    Ingber, Donald E.

    2003-01-01

    In 1993, a Commentary in this journal described how a simple mechanical model of cell structure based on tensegrity architecture can help to explain how cell shape, movement and cytoskeletal mechanics are controlled, as well as how cells sense and respond to mechanical forces (J. Cell Sci. 104, 613-627). The cellular tensegrity model can now be revisited and placed in context of new advances in our understanding of cell structure, biological networks and mechanoregulation that have been made over the past decade. Recent work provides strong evidence to support the use of tensegrity by cells, and mathematical formulations of the model predict many aspects of cell behavior. In addition, development of the tensegrity theory and its translation into mathematical terms are beginning to allow us to define the relationship between mechanics and biochemistry at the molecular level and to attack the larger problem of biological complexity. Part I of this two-part article covers the evidence for cellular tensegrity at the molecular level and describes how this building system may provide a structural basis for the hierarchical organization of living systems--from molecule to organism. Part II, which focuses on how these structural networks influence information processing networks, appears in the next issue.

  15. Amino acids assisted hydrothermal synthesis of hierarchically structured ZnO with enhanced photocatalytic activities

    Science.gov (United States)

    Guo, Yanxia; Lin, Siwen; Li, Xuan; Liu, Yuping

    2016-10-01

    Novel hierarchically structured ZnO, including rose-like, dandelion-like and flower-like, have been synthesized through a simple hydrothermal process using different amino acids (glutamine, histidine and glycine) as structure-directing agents and urea as deposition agent, followed by subsequent calcination. Amino acids played a crucial role in the formation of hierarchically structured ZnO, and different amino acids could induce different exquisite shapes and assembly ways, as well as more oxygen defects. The prepared hierarchically structured ZnO exhibited excellent photocatalytic activities for the photodegradation of Rhodamine B, which was associated with their special hierarchical structures, large BET surface area and the existence of more oxygen defects. Amino acid-assisted growth mechanism of hierarchically structured ZnO was also discussed.

  16. Interaction of light with hematite hierarchical structures: Experiments and simulations

    Science.gov (United States)

    Distaso, Monica; Zhuromskyy, Oleksander; Seemann, Benjamin; Pflug, Lukas; Mačković, Mirza; Encina, Ezequiel; Taylor, Robin Klupp; Müller, Rolf; Leugering, Günter; Spiecker, Erdmann; Peschel, Ulf; Peukert, Wolfgang

    2017-03-01

    Mesocrystalline particles have been recognized as a class of multifunctional materials with potential applications in different fields. However, the internal organization of nanocomposite mesocrystals and its influence on the final properties have not yet been investigated. In this paper, a novel strategy based on electrodynamic simulations is developed to shed light on how the internal structure of mesocrystals influences their optical properties. In a first instance, a unified design protocol is reported for the fabrication of hematite/PVP particles with different morphologies such as pseudo-cubes, rods-like and apple-like structures and controlled particle size distributions. The optical properties of hematite/PVP mesocrystals are effectively simulated by taking their aggregate and nanocomposite structure into consideration. The superposition T-Matrix approach accounts for the aggregate nature of mesocrystalline particles and validate the effective medium approximation used in the framework of the Mie theory and electromagnetic simulation such as Finite Element Method. The approach described in our paper provides the framework to understand and predict the optical properties of mesocrystals and more general, of hierarchical nanostructured particles.

  17. Hierarchical spatial structure of stream fish colonization and extinction

    Science.gov (United States)

    Hitt, N.P.; Roberts, J.H.

    2012-01-01

    Spatial variation in extinction and colonization is expected to influence community composition over time. In stream fish communities, local species richness (alpha diversity) and species turnover (beta diversity) are thought to be regulated by high extinction rates in headwater streams and high colonization rates in downstream areas. We evaluated the spatiotemporal structure of fish communities in streams originally surveyed by Burton and Odum 1945 (Ecology 26: 182-194) in Virginia, USA and explored the effects of species traits on extinction and colonization dynamics. We documented dramatic changes in fish community structure at both the site and stream scales. Of the 34 fish species observed, 20 (59%) were present in both time periods, but 11 (32%) colonized the study area and three (9%) were extirpated over time. Within streams, alpha diversity increased in two of three streams but beta diversity decreased dramatically in all streams due to fish community homogenization caused by colonization of common species and extirpation of rare species. Among streams, however, fish communities differentiated over time. Regression trees indicated that reproductive life-history traits such as spawning mound construction, associations with mound-building species, and high fecundity were important predictors of species persistence or colonization. Conversely, native fishes not associated with mound-building exhibited the highest rates of extirpation from streams. Our results demonstrate that stream fish colonization and extinction dynamics exhibit hierarchical spatial structure and suggest that mound-building fishes serve as keystone species for colonization of headwater streams.

  18. Decoupled Hierarchical Structures for Suppression of Leidenfrost Phenomenon.

    Science.gov (United States)

    Farokhnia, Nazanin; Sajadi, Seyed Mohammad; Irajizad, Peyman; Ghasemi, Hadi

    2017-03-14

    Thermal management of high temperature systems through cooling droplets is limited by the existence of the Leidenfrost point (LFP), at which the formation of a continuous vapor film between a hot solid and a cooling droplet diminishes the heat transfer rate. This limit results in a bottleneck for the advancement of the wide spectrum of systems including high-temperature power generation, electronics/photonics, reactors, and spacecraft. Despite a long time effort on development of surfaces for suppression of this phenomenon, this limit has only shifted to higher temperatures, but still exists. Here, we report a new multiscale decoupled hierarchical structure that suppress the Leidenfrost state and provide efficient heat dissipation at high temperatures. The architecture of these structures is composed of a nanomembrane assembled on top of a deep micropillar structure. This architecture allows to independently tune the involved forces and to suppress LFP. Once a cooling droplet contacts these surfaces, by rerouting the path of vapor flow, the cooling droplet remains attached to the hot solid substrates even at high temperatures (up to 570 °C) for heat dissipation with no existence of Leidenfrost phenomenon. These new surfaces offer unprecedented heat dissipation capacity at high temperatures (2 orders of magnitude higher than the other state-of-the-art surfaces). We envision that these surfaces open a new avenue in thermal management of high-temperature systems through spray cooling.

  19. Structure of urban movements: polycentric activity and entangled hierarchical flows.

    Directory of Open Access Journals (Sweden)

    Camille Roth

    Full Text Available The spatial arrangement of urban hubs and centers and how individuals interact with these centers is a crucial problem with many applications ranging from urban planning to epidemiology. We utilize here in an unprecedented manner the large scale, real-time 'Oyster' card database of individual person movements in the London subway to reveal the structure and organization of the city. We show that patterns of intraurban movement are strongly heterogeneous in terms of volume, but not in terms of distance travelled, and that there is a polycentric structure composed of large flows organized around a limited number of activity centers. For smaller flows, the pattern of connections becomes richer and more complex and is not strictly hierarchical since it mixes different levels consisting of different orders of magnitude. This new understanding can shed light on the impact of new urban projects on the evolution of the polycentric configuration of a city and the dense structure of its centers and it provides an initial approach to modeling flows in an urban system.

  20. Growth Mechanism of a Unique Hierarchical Vaterite Structure

    Science.gov (United States)

    Ma, Guobin; Xu, Yifei; Wang, Mu

    2013-03-01

    Calcium carbonate is one of the most significant minerals in nature as well as in biogenic sources. Calcium carbonate occurs naturally in three crystalline polymorphs, i.e., calcite, aragonite, and vaterite. Although it has been attracted much research attention to understanding of the formation mechanisms of the material, the properties of the vaterite polymorph is not well known. Here we report synthesis and formation mechanism of a unique hierarchical structure of vaterite. The material is grown by a controlled diffusion method. The structure possesses a core and an outer part. The core is convex lens-like and is formed by vaterite nanocrystals that have small misorientations. The outer part is separated into six garlic clove-like segments. Each segment possesses piles of plate-like vaterite crystals, and the orientations of the plates continuously change from pile to pile. Based on real-time experimental results and the structural analysis, a growth mechanism is presented. Work supported by NSFC (Grant No. 51172104) and MOST of China (Grant No. 2101CB630705)

  1. Structural principles governing domain motions in proteins

    NARCIS (Netherlands)

    Hayward, S

    1999-01-01

    With the use of a recently developed method, twenty-four proteins for which two or more X-ray conformers are known have been analyzed to reveal structural principles that govern domain motions in proteins. In all 24 cases, the domain motion is a rotation about a physical axis created through local i

  2. Structural principles governing domain motions in proteins

    NARCIS (Netherlands)

    Hayward, S

    1999-01-01

    With the use of a recently developed method, twenty-four proteins for which two or more X-ray conformers are known have been analyzed to reveal structural principles that govern domain motions in proteins. In all 24 cases, the domain motion is a rotation about a physical axis created through local

  3. Generation of Hierarchically Ordered Structures on a Polymer Film by Electrohydrodynamic Structure Formation.

    Science.gov (United States)

    Tian, Hongmiao; Shao, Jinyou; Hu, Hong; Wang, Li; Ding, Yucheng

    2016-06-29

    The extensive applications of hierarchical structures in optoelectronics, micro/nanofluidics, energy conservation, etc., have led to the development of a variety of approaches for their fabrication, which can be categorized as bottom-up or top-down strategies. Current bottom-up and top-down strategies bear a complementary relationship to each other due to their processing characteristics, i.e., the advantages of one method correspond to the disadvantages of the other, and vice versa. Here we propose a novel method based on electrohydrodynamic structure formation, aimed at combining the main advantages of the two strategies. The method allows the fabrication of a hierarchically ordered structure with well-defined geometry and high mechanical durability on a polymer film, through a simple and low-cost process also suitable for mass-production. In this approach, upon application of an electric field between a template and a substrate sandwiching an air gap and a polymer film, the polymer is pulled toward the template and further flows into the template cavities, resulting in a hierarchical structure with primary and secondary patterns determined by electrohydrodynamic instability and by the template features, respectively. In this work, the fabrication of a hierarchical structure by electrohydrodynamic structure formation is studied using numerical simulations and experimental tests. The proposed method is then employed for the one-step fabrication of a hierarchical structure exhibiting a gradual transition in the periodicity of the primary structure using a slant template and a flat polymer film, which presents an excellent performance on controllable wettability.

  4. Structuring very large domain models

    DEFF Research Database (Denmark)

    Störrle, Harald

    2010-01-01

    View/Viewpoint approaches like IEEE 1471-2000, or Kruchten's 4+1-view model are used to structure software architectures at a high level of granularity. While research has focused on architectural languages and with consistency between multiple views, practical questions such as the structuring a...

  5. Copper oxide assisted cysteine hierarchical structures for immunosensor application

    Energy Technology Data Exchange (ETDEWEB)

    Pandey, Chandra Mouli [Biomedical Instrumentation Section, CSIR-National Physical Laboratory, New Delhi 110012 (India); Department of Chemistry, Faculty of Science, Banaras Hindu University, Varanasi 221005 (India); Sumana, Gajjala, E-mail: sumanagajjala@gmail.com [Biomedical Instrumentation Section, CSIR-National Physical Laboratory, New Delhi 110012 (India); Tiwari, Ida [Department of Chemistry, Faculty of Science, Banaras Hindu University, Varanasi 221005 (India)

    2014-09-08

    The present work describes the promising electrochemical immunosensing strategy based on copper (II) assisted hierarchical cysteine structures (CuCys) varying from star to flower like morphology. The CuCys having average size of 10 μm have been synthesised using L-Cysteine as initial precursor in presence of copper oxide under environmentally friendly conditions in aqueous medium. To delineate the synthesis mechanism, detailed structural investigations have been carried out using characterization techniques such as X-ray diffraction, transmission electron microscopy, and Fourier transform infrared spectroscopy. The electrochemical behaviour of self-assembled CuCys on gold electrode shows surface controlled electrode reaction with an apparent electron transfer rate constant of 3.38 × 10{sup −4 }cm s{sup −1}. This innovative platform has been utilized to fabricate an immunosensor by covalently immobilizing monoclonal antibodies specific for Escherichia coli O157:H7 (E. coli). Under the optimal conditions, the fabricated immunosensor is found to be sensitive and specific for the detection of E. coli with a detection limit of 10 cfu/ml.

  6. Leveraging hierarchical population structure in discrete association studies.

    Directory of Open Access Journals (Sweden)

    Jonathan Carlson

    Full Text Available Population structure can confound the identification of correlations in biological data. Such confounding has been recognized in multiple biological disciplines, resulting in a disparate collection of proposed solutions. We examine several methods that correct for confounding on discrete data with hierarchical population structure and identify two distinct confounding processes, which we call coevolution and conditional influence. We describe these processes in terms of generative models and show that these generative models can be used to correct for the confounding effects. Finally, we apply the models to three applications: identification of escape mutations in HIV-1 in response to specific HLA-mediated immune pressure, prediction of coevolving residues in an HIV-1 peptide, and a search for genotypes that are associated with bacterial resistance traits in Arabidopsis thaliana. We show that coevolution is a better description of confounding in some applications and conditional influence is better in others. That is, we show that no single method is best for addressing all forms of confounding. Analysis tools based on these models are available on the internet as both web based applications and downloadable source code at http://atom.research.microsoft.com/bio/phylod.aspx.

  7. Hierarchical tubular structures grown from the gel/liquid interface.

    Science.gov (United States)

    Steenbjerg Ibsen, Casper Jon; Mikladal, Bjørn Fridur; Bjørnholt Jensen, Uffe; Birkedal, Henrik

    2014-12-01

    Three dimensional hierarchical materials are widespread in nature but are difficult to synthesize by using self-assembly/organization. Here, we employ a gel-liquid interface to obtain centimeter-long ∼100 μm diameter tubes with complex mineral wall structures that grow from the interface into solution. The gel, made from gelatin, is loaded with metal chloride salt, whereas the solution is a high pH anion source. Tubes were obtained with a range of cations (Ca(2+) , Sr(2+) , Ba(2+) , Cu(2+) , and Zn(2+) ) and anions (CO3 (2-) and PO4 (3-) ). The crystalline phases found in the tube walls corresponded to expectations from solution chemistries and phase solubilities. The growth mechanism is found to be akin to that of chemical gardens. The divalent cations modify the strength of the gelatin gel in a manner that involves not only simple electrostatic screening, but also ion-specific effects. Thus, tubes were not obtained for those ions and/or concentrations that significantly changed the gel's mechanical structure. At high Cu(2+) loading, for example, vertical convection bands, not Liesegang bands, were observed in the gels.

  8. Hierarchical object parsing from structured noisy point clouds.

    Science.gov (United States)

    Barbu, Adrian

    2013-07-01

    Object parsing and segmentation from point clouds are challenging tasks because the relevant data is available only as thin structures along object boundaries or other features, and is corrupted by large amounts of noise. To handle this kind of data, flexible shape models are desired that can accurately follow the object boundaries. Popular models such as active shape and active appearance models (AAMs) lack the necessary flexibility for this task, while recent approaches such as the recursive compositional models make model simplifications to obtain computational guarantees. This paper investigates a hierarchical Bayesian model of shape and appearance in a generative setting. The input data is explained by an object parsing layer which is a deformation of a hidden principal component analysis (PCA) shape model with Gaussian prior. The paper also introduces a novel efficient inference algorithm that uses informed data-driven proposals to initialize local searches for the hidden variables. Applied to the problem of object parsing from structured point clouds such as edge detection images, the proposed approach obtains state-of-the-art parsing errors on two standard datasets without using any intensity information.

  9. Curved hierarchically micro-micro structured polypropylene surfaces by injection molding

    Science.gov (United States)

    Mielonen, K.; Suvanto, M.; Pakkanen, T. A.

    2017-01-01

    Structural hierarchy of polymer surfaces has been of central interest due to its diverse surface functionalities. However, the research on hierarchically structured polymer surfaces has been focused on planar surfaces even though applications may also be variously curved. This study demonstrates the fabrication of curved rigid polymer surfaces with precisely controlled hierarchical microstructures. The surface structuration was made on an aluminum foil with a microworking robot, and polypropylene replicas were produced by injection molding. Depending on the mold structuration procedure, the curved mold can have either radially or vertically oriented structures. Both convex and concave curvatures were here applied to spherically and cylindrically curved surfaces. A simple structure protection technique was applied to support the structures during mechanical bending of the foil. The planar hierarchically microstructured polypropylene surfaces were characterized to exhibit superhydrophobicity, and similar structures were obtained on the curved surfaces. Introducing the curvature to the hierarchically structured surfaces may further widen the applicability of functionalized polymer surfaces.

  10. Transfer printing of 3D hierarchical gold structures using a sequentially imprinted polymer stamp

    Energy Technology Data Exchange (ETDEWEB)

    Zhang Fengxiang; Low, Hong Yee [Institute of Materials Research and Engineering, A-STAR - Agency for Science, Technology and Research, 3 Research Link, 117602 (Singapore)], E-mail: hy-low@imre.a-star.edu.sg

    2008-10-15

    Complex three-dimensional (3D) hierarchical structures on polymeric materials are fabricated through a process referred to as sequential imprinting. In this work, the sequentially imprinted polystyrene film is used as a soft stamp to replicate hierarchical structures onto gold (Au) films, and the Au structures are then transferred to a substrate by transfer printing at an elevated temperature and pressure. Continuous and isolated 3D structures can be selectively fabricated with the assistance of thermo-mechanical deformation of the polymer stamp. Hierarchical Au structures are achieved without the need for a corresponding three-dimensionally patterned mold.

  11. Developing Dynamic Virtual Environments Using Hierarchical, Tree-Structured Approach

    Directory of Open Access Journals (Sweden)

    Wan Mohd Rizhan Wan Idris

    2011-05-01

    Full Text Available Virtual reality (VR has been utilized in various applications such as in architecture, medicine, advertisement, business, entertainment, and education. In the world of simulation, VR software allows users to visualize, manipulate and interact with the computers and complex data. However, developing VR environments is costly and expensive. Highly-technical persons are needed to create the virtual objects from scratch. Once a virtual system is created, managing and modifying it creates further problems. There is a need for non-technical users to be able to create and modify their own virtual environments. This paper discusses a systematic technique to develop dynamic virtual environments and to manage virtual objects in their virtual environment. The technique is called hierarchical, tree-structured approach. To implement the technique, object-oriented programming language was used such as Java, Java 3D and Java Swing. For the usability and performance of the technique, a virtual environment has been created to become as case study. The tool has been perceived as an easy tool to use, especially for an environment in education.

  12. DEVELOPING DYNAMIC VIRTUAL ENVIRONMENTS USING HIERARCHICAL, TREE-STRUCTURED APPROACH

    Directory of Open Access Journals (Sweden)

    Wan Mohd Rizhan Wan Idris

    2015-10-01

    Full Text Available Virtual reality (VR has been utilized in various applications such as in architecture, medicine, advertisement, business, entertainment, and education. In the world of simulation, VR software allows users to visualize, manipulate and interact with the computers and complex data. However, developing VR environments is costly and expensive. Highly-technical persons are needed to create the virtual objects from scratch. Once a virtual system is created, managing and modifying it creates further problems. There is a need for non-technical users to be able to create and modify their own virtual environments. This paper discusses a systematic technique to develop dynamic virtual environments and to manage virtual objects in their virtual environment. The technique is called hierarchical, tree-structured approach. To implement the technique, object-oriented programming language was used such as Java, Java 3D and Java Swing. For the usability and performance of the technique, a virtual environment has been created to become as case study. The tool has been perceived as an easy tool to use, especially for an environment in education.

  13. SO2 Emissions in China - Their Network and Hierarchical Structures

    Science.gov (United States)

    Yan, Shaomin; Wu, Guang

    2017-04-01

    SO2 emissions lead to various harmful effects on environment and human health. The SO2 emission in China has significant contribution to the global SO2 emission, so it is necessary to employ various methods to study SO2 emissions in China with great details in order to lay the foundation for policymaking to improve environmental conditions in China. Network analysis is used to analyze the SO2 emissions from power generation, industrial, residential and transportation sectors in China for 2008 and 2010, which are recently available from 1744 ground surface monitoring stations. The results show that the SO2 emissions from power generation sector were highly individualized as small-sized clusters, the SO2 emissions from industrial sector underwent an integration process with a large cluster contained 1674 places covering all industrial areas in China, the SO2 emissions from residential sector was not impacted by time, and the SO2 emissions from transportation sector underwent significant integration. Hierarchical structure is obtained by further combining SO2 emissions from all four sectors and is potentially useful to find out similar patterns of SO2 emissions, which can provide information on understanding the mechanisms of SO2 pollution and on designing different environmental measure to combat SO2 emissions.

  14. Bayesian structural equation modeling method for hierarchical model validation

    Energy Technology Data Exchange (ETDEWEB)

    Jiang Xiaomo [Department of Civil and Environmental Engineering, Vanderbilt University, Box 1831-B, Nashville, TN 37235 (United States)], E-mail: xiaomo.jiang@vanderbilt.edu; Mahadevan, Sankaran [Department of Civil and Environmental Engineering, Vanderbilt University, Box 1831-B, Nashville, TN 37235 (United States)], E-mail: sankaran.mahadevan@vanderbilt.edu

    2009-04-15

    A building block approach to model validation may proceed through various levels, such as material to component to subsystem to system, comparing model predictions with experimental observations at each level. Usually, experimental data becomes scarce as one proceeds from lower to higher levels. This paper presents a structural equation modeling approach to make use of the lower-level data for higher-level model validation under uncertainty, integrating several components: lower-level data, higher-level data, computational model, and latent variables. The method proposed in this paper uses latent variables to model two sets of relationships, namely, the computational model to system-level data, and lower-level data to system-level data. A Bayesian network with Markov chain Monte Carlo simulation is applied to represent the two relationships and to estimate the influencing factors between them. Bayesian hypothesis testing is employed to quantify the confidence in the predictive model at the system level, and the role of lower-level data in the model validation assessment at the system level. The proposed methodology is implemented for hierarchical assessment of three validation problems, using discrete observations and time-series data.

  15. The Emergence of Hierarchical Structure in Human Language

    Directory of Open Access Journals (Sweden)

    Shigeru eMiyagawa

    2013-02-01

    Full Text Available We propose a novel account for the emergence of human language syntax. Like many evolutionary innovations, language arose from the adventitious combination of two pre-existing, simpler systems that had been evolved for other functional tasks. The first system, Type E(xpression, is found in birdsong, where it marks territory, mating availability, and similar ‘expressive’ functions. The second system, Type L(exical, has been suggestively found in non-human primate calls and in honeybee waggle dances, where it demarcates predicates with one or more ‘arguments,’ such as combinations of calls in monkeys or compass headings set to sun position in honeybees. We show that human language syntax is composed of two layers that parallel these two independently evolved systems: an E layer resembling the Type E system of birdsong and an L layer providing words. The existence of the E and L layers can be confirmed using standard linguistic methodology. Each layer, E and L, when considered separately, are characterizable as finite state systems, as observed in several non-human species. When the two systems are put together they interact, yielding the unbounded, non-finite state, hierarchical structure that serves as the hallmark of ful

  16. A hierarchical cluster analysis of normal-tension glaucoma using spectral-domain optical coherence tomography parameters.

    Science.gov (United States)

    Bae, Hyoung Won; Ji, Yongwoo; Lee, Hye Sun; Lee, Naeun; Hong, Samin; Seong, Gong Je; Sung, Kyung Rim; Kim, Chan Yun

    2015-01-01

    Normal-tension glaucoma (NTG) is a heterogenous disease, and there is still controversy about subclassifications of this disorder. On the basis of spectral-domain optical coherence tomography (SD-OCT), we subdivided NTG with hierarchical cluster analysis using optic nerve head (ONH) parameters and retinal nerve fiber layer (RNFL) thicknesses. A total of 200 eyes of 200 NTG patients between March 2011 and June 2012 underwent SD-OCT scans to measure ONH parameters and RNFL thicknesses. We classified NTG into homogenous subgroups based on these variables using a hierarchical cluster analysis, and compared clusters to evaluate diverse NTG characteristics. Three clusters were found after hierarchical cluster analysis. Cluster 1 (62 eyes) had the thickest RNFL and widest rim area, and showed early glaucoma features. Cluster 2 (60 eyes) was characterized by the largest cup/disc ratio and cup volume, and showed advanced glaucomatous damage. Cluster 3 (78 eyes) had small disc areas in SD-OCT and were comprised of patients with significantly younger age, longer axial length, and greater myopia than the other 2 groups. A hierarchical cluster analysis of SD-OCT scans divided NTG patients into 3 groups based upon ONH parameters and RNFL thicknesses. It is anticipated that the small disc area group comprised of younger and more myopic patients may show unique features unlike the other 2 groups.

  17. HIERARCHICAL STRUCTURE IN ADL AND IADL - ANALYTICAL ASSUMPTIONS AND APPLICATIONS FOR CLINICIAN AND RESEARCHERS

    NARCIS (Netherlands)

    KEMPEN, GIJM; MYERS, AM; POWELL, LE

    1995-01-01

    The results of a Canadian study have shown that a set of 12 (I)ADL items did not meet the criteria of Guttman's scalogram program, questioning the assumption of hierarchical ordering. In this article, the hierarchical structure of (I)ADL items from the Canadian elderly sample is retested with anothe

  18. H-P2PSIP: Interconnection of P2PSIP domains for Global Multimedia Services based on a Hierarchical DHT Overlay Network

    OpenAIRE

    Martínez-Yelmo, Isaías; Bikfalvi, Alex; Cuevas, Rubén; Guerrero, Carmen; García-Reinoso, Jaime

    2009-01-01

    The IETF P2PSIP WG is currently standardising a protocol for distributed mul- timedia services combining the media session functionality of SIP and the decentralised distribution and localisation of resources in peer-to-peer networks. The current P2PSIP scenarios only consider the infrastructure for the connectivity inside a single domain. This paper proposes an extension of the current work to a hierarchical multi-domain scenario: a two level hierarchical peer-to-peer overlay architecture...

  19. Hierarchical structure and dynamics of an ionic liquid 1-octyl-3-methylimidazolium chloride.

    Science.gov (United States)

    Yamamuro, Osamu; Yamada, Takeshi; Kofu, Maiko; Nakakoshi, Masamichi; Nagao, Michihiro

    2011-08-07

    We have performed the heat capacity, neutron diffraction, and neutron quasielastic scattering measurements of an ionic liquid 1-octyl-3-methylimidazolium chloride (C8mimCl). The heat capacity data revealed that C8mimCl exhibits a glass transition with a large heat capacity jump at T(g) = 214 K, which is lower than T(g) of C4mimCl with a shorter alkyl-chain. In the neutron diffraction measurement for a deuterated analogue, d-C8mimCl, the peaks associated with the inter-domain, inter-ionic, and inter-alkyl-chain correlations appeared at (3, 11, and 14) nm(-1), respectively. The temperature dependence of these peaks indicates that the packing of the alkyl-chains becomes more compact and the domains become more vivid and larger as decreasing temperature. The quasielastic neutron scattering measurements using neutron spin echo and time-of-flight type instruments demonstrated that C8mimCl has faster relaxations probably owing to the alkyl-group and a slower relaxation owing to the ions. The latter relaxation, which is related to the glass transition, is of non-exponential as in the α relaxation of glass-forming molecular liquids. The relaxation of domains could not be observed in the present experiment but should have relaxation times longer than 100 ns. This is the first report to clarify temperature dependence of the hierarchical structure and relaxations simultaneously for a typical ionic liquid.

  20. D Nearest Neighbour Search Using a Clustered Hierarchical Tree Structure

    Science.gov (United States)

    Suhaibah, A.; Uznir, U.; Anton, F.; Mioc, D.; Rahman, A. A.

    2016-06-01

    Locating and analysing the location of new stores or outlets is one of the common issues facing retailers and franchisers. This is due to assure that new opening stores are at their strategic location to attract the highest possible number of customers. Spatial information is used to manage, maintain and analyse these store locations. However, since the business of franchising and chain stores in urban areas runs within high rise multi-level buildings, a three-dimensional (3D) method is prominently required in order to locate and identify the surrounding information such as at which level of the franchise unit will be located or is the franchise unit located is at the best level for visibility purposes. One of the common used analyses used for retrieving the surrounding information is Nearest Neighbour (NN) analysis. It uses a point location and identifies the surrounding neighbours. However, with the immense number of urban datasets, the retrieval and analysis of nearest neighbour information and their efficiency will become more complex and crucial. In this paper, we present a technique to retrieve nearest neighbour information in 3D space using a clustered hierarchical tree structure. Based on our findings, the proposed approach substantially showed an improvement of response time analysis compared to existing approaches of spatial access methods in databases. The query performance was tested using a dataset consisting of 500,000 point locations building and franchising unit. The results are presented in this paper. Another advantage of this structure is that it also offers a minimal overlap and coverage among nodes which can reduce repetitive data entry.

  1. AFM study of excimer laser patterning of block-copolymer: Creation of ordered hierarchical, hybrid, or recessed structures

    Science.gov (United States)

    Švanda, Jan; Siegel, Jakub; Švorčík, Vaclav; Lyutakov, Oleksiy

    2016-05-01

    We report fabrication of the varied range of hierarchical structures by combining bottom-up self-assembly of block copolymer poly(styrene-block-vinylpyridine) (PS-b-P4VP) with top-down excimer laser patterning method. Different procedures were tested, where laser treatment was applied before phase separation and after phase separation or phase separation and surface reconstruction. Laser treatment was performed using either polarized laser light with the aim to create periodical pattern on polymer surface or non-polarized light for preferential removing of polystyrene (PS) part from PS-b-P4VP. Additionally, dye was introduced into one part of block copolymer (P4VP) with the aim to modify its response to laser light. Resulting structures were analyzed by XPS, UV-vis and AFM techniques. Application of polarized laser light leads to creation of structures with hierarchical, recessed or hybrid geometries. Non-polarized laser beam allows pronouncing the block copolymer phase separated structure. Tuning the order of steps or individual step conditions enables the efficient reorientation of block-copolymer domain at large scale, fabrication of hierarchical, hybrid or recessed structures. The obtained structures can find potential applications in nanotechnology, photonics, plasmonics, information storage, optical devices, sensors and smart surfaces.

  2. Hierarchical assemblies of soft matters from polymers and liquid crystals on structured surfaces

    Science.gov (United States)

    Honglawan, Apiradee

    Hierarchical, multifunctional materials hold important keys to numerous advanced technologies, including electronics, optics, and medicine. This thesis encompasses generation of hierarchical structures with novel morphologies and functions through self-assembly directed by lithographically fabricated templates. Here, two soft materials, amphiphilic random copolymers of photopolymerized acryloyl chloride (ranPAC) and smectic-A liquid crystal (SmA-LC) molecule, 4'(5,5,6,6,7,7,8,8,9,9,10,10,11,11,12,12,12-heptadecaflu-orododecyloxy)-biphenyl-4-carboxylic acid ethyl ester, are synthesized as model systems to investigate the governing principles at the topographic surface/interface. The ranPAC can self-organize into nanomicelles with high regularity and stability, typically not possible in random copolymer systems. The morphology can be controlled by the photopolymerization conditions and solvent; the crosslinked shell makes the micelles robust against drying and storage. Using SU-8 micropillar arrays with spatially controlled surface chemistry as templates, we construct hierarchical microporous structures with tunable pore size and symmetry (e.g. square array), and uncover a new evaporative assembly method. By functionalizing the ranPAC nanovesicles with cationic poly(ethyleneimines), we encapsulate the anticancer drug, doxorubicin hydrochloride, and mRNA at a high payload, which are delivered to HEK 293T cells in vitro at a low cytotoxicity level. SmA-LC are characterized by arrangement of molecules into thin layers with the long molecular axis parallel to the layer normal, forming a close-packed hexagonal array of topological defects known as focal conic domains (FCDs) in a thin film. Using a series of SU-8 micropillar arrays with different size, shape, height, and symmetry as topological templates, we investigate the epitaxial and hierarchical assemblies of FCDs; whether the system favors confinement or "pillar edge-pinning" depends on balance of the elastic energy

  3. Correlation between Hierarchical Structure and Processing Control of Large-area Spray-coated Polymer Solar Cells toward High Performance.

    Science.gov (United States)

    Huang, Yu-Ching; Tsao, Cheng-Si; Cha, Hou-Chin; Chuang, Chih-Min; Su, Chun-Jen; Jeng, U-Ser; Chen, Charn-Ying

    2016-01-28

    The formation mechanism of a spray-coated film is different from that of a spin-coated film. This study employs grazing incidence small- and wide-angle X-ray Scattering (GISAXS and GIWAXS, respectively) quantitatively and systematically to investigate the hierarchical structure and phase-separated behavior of a spray-deposited blend film. The formation of PCBM clusters involves mutual interactions with both the P3HT crystal domains and droplet boundary. The processing control and the formed hierarchical structure of the active layer in the spray-coated polymer/fullerene blend film are compared to those in the spin-coated film. How the different post-treatments, such as thermal and solvent vapor annealing, tailor the hierarchical structure of the spray-coated films is quantitatively studied. Finally, the relationship between the processing control and tailored BHJ structures and the performance of polymer solar cell devices is established here, taking into account the evolution of the device area from 1 × 0.3 and 1 × 1 cm(2). The formation and control of the special networks formed by the PCBM cluster and P3HT crystallites, respectively, are related to the droplet boundary. These structures are favorable for the transverse transport of electrons and holes.

  4. Correlation between Hierarchical Structure and Processing Control of Large-area Spray-coated Polymer Solar Cells toward High Performance

    Science.gov (United States)

    Huang, Yu-Ching; Tsao, Cheng-Si; Cha, Hou-Chin; Chuang, Chih-Min; Su, Chun-Jen; Jeng, U-Ser; Chen, Charn-Ying

    2016-01-01

    The formation mechanism of a spray-coated film is different from that of a spin-coated film. This study employs grazing incidence small- and wide-angle X-ray Scattering (GISAXS and GIWAXS, respectively) quantitatively and systematically to investigate the hierarchical structure and phase-separated behavior of a spray-deposited blend film. The formation of PCBM clusters involves mutual interactions with both the P3HT crystal domains and droplet boundary. The processing control and the formed hierarchical structure of the active layer in the spray-coated polymer/fullerene blend film are compared to those in the spin-coated film. How the different post-treatments, such as thermal and solvent vapor annealing, tailor the hierarchical structure of the spray-coated films is quantitatively studied. Finally, the relationship between the processing control and tailored BHJ structures and the performance of polymer solar cell devices is established here, taking into account the evolution of the device area from 1 × 0.3 and 1 × 1 cm2. The formation and control of the special networks formed by the PCBM cluster and P3HT crystallites, respectively, are related to the droplet boundary. These structures are favorable for the transverse transport of electrons and holes. PMID:26817585

  5. Fabrication of micro/nano hierarchical structures with analysis on the surface mechanics

    Science.gov (United States)

    Jheng, Yu-Sheng; Lee, Yeeu-Chang

    2016-10-01

    Biomimicry refers to the imitation of mechanisms and features found in living creatures using artificial methods. This study used optical lithography, colloidal lithography, and dry etching to mimic the micro/nano hierarchical structures covering the soles of gecko feet. We measured the static contact angle and contact angle hysteresis to reveal the behavior of liquid drops on the hierarchical structures. Pulling tests were also performed to measure the resistance of movement between the hierarchical structures and a testing plate. Our results reveal that hierarchical structures at the micro-/nano-scale are considerably hydrophobic, they provide good flow characteristics, and they generate more contact force than do surfaces with micro-scale cylindrical structures.

  6. Hierarchical Zeolites with Amine-Functionalized Mesoporous Domains for Carbon Dioxide Capture.

    Science.gov (United States)

    Nguyen, Tien Hoa; Kim, Sungjune; Yoon, Minyoung; Bae, Tae-Hyun

    2016-03-08

    To prepare materials with high CO2 adsorption, a series of hierarchical LTA zeolites possessing various mesopore spaces that are decorated with alkylamines was designed and synthesized. The highest CO2 uptake capacity was achieved when (3-aminopropyl)trimethoxysilane (APTMS) was grafted onto the hierarchical LTA zeolite having the largest mesopores. Owing to the contributions of both alkylamine groups grafted onto the mesopore surfaces and active sites in the LTA zeolites, the amount of CO2 that can be taken up on these materials is much higher than for conventional aminosilicas such SBA-15 and MCM-41. Furthermore, the adsorbent shows good CO2 uptake capacity and recyclability in dynamic flow conditions.

  7. Domain structure of Lassa virus L protein.

    Science.gov (United States)

    Brunotte, Linda; Lelke, Michaela; Hass, Meike; Kleinsteuber, Katja; Becker-Ziaja, Beate; Günther, Stephan

    2011-01-01

    The 200-kDa L protein of arenaviruses plays a central role in viral genome replication and transcription. This study aimed at providing evidence for the domain structure of L protein by combining bioinformatics with a stepwise mutagenesis approach using the Lassa virus minireplicon system. Potential interdomain linkers were predicted using various algorithms. The prediction was challenged by insertion of flexible sequences into the predicted linkers. Insertion of 5 or 10 amino acid residues was tolerated at seven sites (S407, G446, G467, G774, G939, S1952, and V2074 in Lassa virus AV). At two of these sites, G467 and G939, L protein could be split into an N-terminal and a C-terminal part, which were able to trans-complement each other and reconstitute a functional complex upon coexpression. Coimmunoprecipitation studies revealed physical interaction between the N- and C-terminal domains, irrespective of whether L protein was split at G467 or G939. In confocal immunofluorescence microscopy, the N-terminal domains showed a dot-like, sometimes perinuclear, cytoplasmic distribution similar to that of full-length L protein, while the C-terminal domains were homogenously distributed in cytoplasm. The latter were redistributed into the dot-like structures upon coexpression with the corresponding N-terminal domain. In conclusion, this study demonstrates two interdomain linkers in Lassa virus L protein, at G467 and G939, suggesting that L protein is composed of at least three structural domains spanning residues 1 to 467, 467 to 939, and 939 to 2220. The first domain seems to mediate accumulation of L protein into cytoplasmic dot-like structures.

  8. Building Algebra Testlets: A Comparison of Hierarchical and Linear Structures.

    Science.gov (United States)

    Wainer, Howard; And Others

    1991-01-01

    Hierarchical (adaptive) and linear methods of testlet construction were compared. The performance of 2,080 ninth and tenth graders on a 4-item testlet was used to predict performance on the entire test. The adaptive test was slightly superior as a predictor, but the cost of obtaining that superiority was considerable. (SLD)

  9. Building Algebra Testlets: A Comparison of Hierarchical and Linear Structures.

    Science.gov (United States)

    Wainer, Howard; And Others

    1991-01-01

    Hierarchical (adaptive) and linear methods of testlet construction were compared. The performance of 2,080 ninth and tenth graders on a 4-item testlet was used to predict performance on the entire test. The adaptive test was slightly superior as a predictor, but the cost of obtaining that superiority was considerable. (SLD)

  10. Hierarchical Data Structures in Adventure Education and Therapy

    Science.gov (United States)

    Russell, Keith; Sibthorp, Jim

    2004-01-01

    Hierarchical linear modeling (HIM) is an approach used in data analysis to better understand how program outcomes are affected by the "nested" nature of data collected in many studies. An outcome can be considered variables such as an individual's self-efficacy, social skills, or more targeted outcomes such as demonstrated reading and mathematical…

  11. Reflection of hierarchical medium structures of different scales in the space time data of wave fields distribution.

    Science.gov (United States)

    Hachay, Olga; Khachay, Andrey

    2015-04-01

    The last decades are characterized by active development of Earth's sciences. The modern research methods and technologies give the opportunity to obtain new data about the Earth's structure and processes, which occur in its interior. The conception development about the nonlinear geodynamics practically coincides with research of nonlinear processes in different parts of physics. In geology soliton and auto wave conceptions are developed, principles of synergetic and self organization become be used, in geodynamics the macro quantum behavior of large mass matter, which are in critical state, in geophysics the auto wave nature of geophysical fields is researched in a frame of a new structural model with hierarchical inclusions. It is very significant to define the time of reaction lagging, in spite of the influence on the massif can be assumed as elastic. The unique model which can explain that effect is a model of the massif with a hierarchic structure. We developed a mathematical algorithm using integral and integral-differential equations for 2-D model for two problems in a frequency domain: diffraction a sound wave and linear polarized transverse wave through a arbitrary hierarchy rank inclusion plunged in an N-layered medium. That algorithm differs from the fractal model approach by a freer selecting of heterogeneities position of each rank. And the second, the problem is solved in the dynamical approach. The higher the amount of the hierarchic ranks the more is the degree of nonlinearity of the massive response and the longer can be the time of massive reaction lag of the influence. For research of hierarchic medium we had developed an iterative algorithm for electromagnetic and seismic fields in the problem setting similar to analyze higher for layered-block models with homogeneous inclusions. We had developed an iterative algorithm of inverse problem solution for the same models, using the approach of three stage interpretation. For that we had developed a

  12. Web Application for Hierarchical Organizational Structure Optimization – Human Resource Management Case Study

    Directory of Open Access Journals (Sweden)

    Kofjač Davorin

    2015-08-01

    Full Text Available Background and Purpose: In a complex strictly hierarchical organizational structure, undesired oscillations may occur, which have not yet been adequately addressed. Therefore, parameter values, which define fluctuations and transitions from one state to another, need to be optimized to prevent oscillations and to keep parameter values between lower and upper bounds. The objective was to develop a simulation model of hierarchical organizational structure as a web application to help in solving the aforementioned problem.

  13. Structured hints : extracting and abstracting domain expertise.

    Energy Technology Data Exchange (ETDEWEB)

    Hereld, M.; Stevens, R.; Sterling, T.; Gao, G. R.; Mathematics and Computer Science; California Inst. of Tech.; Louisiana State Univ.; Univ. of Delaware

    2009-03-16

    We propose a new framework for providing information to help optimize domain-specific application codes. Its design addresses problems that derive from the widening gap between the domain problem statement by domain experts and the architectural details of new and future high-end computing systems. The design is particularly well suited to program execution models that incorporate dynamic adaptive methodologies for live tuning of program performance and resource utilization. This new framework, which we call 'structured hints', couples a vocabulary of annotations to a suite of performance metrics. The immediate target is development of a process by which a domain expert describes characteristics of objects and methods in the application code that would not be readily apparent to the compiler; the domain expert provides further information about what quantities might provide the best indications of desirable effect; and the interactive preprocessor identifies potential opportunities for the domain expert to evaluate. Our development of these ideas is progressing in stages from case study, through manual implementation, to automatic or semi-automatic implementation. In this paper we discuss results from our case study, an examination of a large simulation of a neural network modeled after the neocortex.

  14. Resolution of Singularities Introduced by Hierarchical Structure in Deep Neural Networks.

    Science.gov (United States)

    Nitta, Tohru

    2016-06-30

    We present a theoretical analysis of singular points of artificial deep neural networks, resulting in providing deep neural network models having no critical points introduced by a hierarchical structure. It is considered that such deep neural network models have good nature for gradient-based optimization. First, we show that there exist a large number of critical points introduced by a hierarchical structure in deep neural networks as straight lines, depending on the number of hidden layers and the number of hidden neurons. Second, we derive a sufficient condition for deep neural networks having no critical points introduced by a hierarchical structure, which can be applied to general deep neural networks. It is also shown that the existence of critical points introduced by a hierarchical structure is determined by the rank and the regularity of weight matrices for a specific class of deep neural networks. Finally, two kinds of implementation methods of the sufficient conditions to have no critical points are provided. One is a learning algorithm that can avoid critical points introduced by the hierarchical structure during learning (called avoidant learning algorithm). The other is a neural network that does not have some critical points introduced by the hierarchical structure as an inherent property (called avoidant neural network).

  15. Modelling of seismic-electromagnetic Processes in hierarchic Structures, caused by seism-tectonic Activity

    Science.gov (United States)

    Hachay, Olga; Khachay, Andrey

    2013-04-01

    Rock massive can be described by four functions: structure, physical features, content and state. The last feature plays the main role by forecasting the dynamical events which can occur in it. The energy and intensity of the dynamical events depend from the volume of the massive and the space-time changes of the influence on it. The second feature of the state evolution is: the local volume massive does not immediately respond on the changing of the surrounded it stress state. Therefore it stores the response energy and then extracts it through a high energy dynamical effect. It is very significant to define the time of reaction lagging, in spite of the influence on the massive can be assumed as elastic. The unique model which can explain that effect is a model of the massive with a hierarchic structure. We developed a mathematical algorithm using integral and integral-differential equations for 2-D model for two problems in a frequency domain: diffraction a sound wave and linear polarized transverse wave through a arbitrary hierarchy rank inclusion plunged in an N-layered medium. That algorithm differs from the fractal model approach by a freer selecting of heterogeneities position of each rank. And the second the problem is solved in the dynamical approach. The higher the amount of the hierarchic ranks the more is the degree of nonlinearity of the massive response and the longer can be the time of massive reaction lag of the influence. The paper was supported by the grant RFBR 10-05-00013 Key Words: geosynergetics, theory and experimental results.

  16. The structure of dust aggregates in hierarchical coagulation

    CERN Document Server

    Dominik, Carsten; Borel, Herman

    2016-01-01

    Dust coagulation in interstellar space and protoplanetary disks is usually treated as one of 2 extreme cases: Particle-Cluster Aggregation and Cluster-Cluster Aggregation. In this paper we study the process of hierarchical growth, where aggregates are built from significantly smaller aggregates (but not monomers). We show that this process can be understood as a modified, PCA-like process that produces porous, but non-fractal particles whose filling factor is chiefly determined by the porosity of the building blocks. We also show that in a coagulation environment where relative velocities are driven by turbulence, a logarithmically flat mass distribution (equal mass per mass decade) as it is typically found in environments where fragmentation replenishes small grains, leads to a situation where small particles and aggregates dominate the growth of large ones. Therefore, in such environments, hierarchical growth should be seen as the norm. Consequently, we predict that the aggregates in such environments are n...

  17. Zipf's Law, Hierarchical Structure, and Cards-Shuffling Model for Urban Development

    Directory of Open Access Journals (Sweden)

    Yanguang Chen

    2012-01-01

    Full Text Available Hierarchy of cities reflects the ubiquitous structure frequently observed in the natural world and social institutions. Where there is a hierarchy with cascade structure, there is a Zipf's rank-size distribution, and vice versa. However, we have no theory to explain the spatial dynamics associated with Zipf's law of cities. In this paper, a new angle of view is proposed to find the simple rules dominating complex systems and regular patterns behind random distribution of cities. The hierarchical structure can be described with a set of exponential functions that are identical in form to Horton-Strahler's laws on rivers and Gutenberg-Richter's laws on earthquake energy. From the exponential models, we can derive four power laws including Zipf's law indicative of fractals and scaling symmetry. A card-shuffling model is built to interpret the relation between Zipf's law and hierarchy of cities. This model can be expanded to illuminate the general empirical power-law distributions across the individual physical and social sciences, which are hard to be comprehended within the specific scientific domains. This research is useful for us to understand how complex systems such as networks of cities are self-organized.

  18. Quasar Evolution Driven by Galaxy Encounters in Hierarchical Structures

    CERN Document Server

    Menci, N; Fontana, A; Giallongo, E; Poli, F; Vittorini, V

    2003-01-01

    We link the evolution of the galaxies in the hierarchical clustering scenario with the changing accretion rates of cold gas onto the central massive black holes that power the quasars. We base on galaxy interactions as main triggers of accretion; the related scaling laws are taken up from Cavaliere & Vittorini (2000), and grafted to a semi-analytic code for galaxy formation. As a result, at high $z$ the protogalaxies grow rapidly by hierarchical merging; meanwhile, much fresh gas is imported and also destabilized, so the holes are fueled at their full Eddington rates. At lower $z$ the galactic dynamical events are mostly encounters in hierarchically growing groups; now the refueling peters out, as the residual gas is exhausted while the destabilizing encounters dwindle. So, with no parameter tuning other than needed for stellar observables, our model uniquely produces at $z>3$ a rise, and at $z\\lesssim 2.5 $ a decline of the bright quasar population as steep as observed. In addition, our results closely f...

  19. Constrained hierarchical least square nonlinear equation solvers. [for indefinite stiffness and large structural deformations

    Science.gov (United States)

    Padovan, J.; Lackney, J.

    1986-01-01

    The current paper develops a constrained hierarchical least square nonlinear equation solver. The procedure can handle the response behavior of systems which possess indefinite tangent stiffness characteristics. Due to the generality of the scheme, this can be achieved at various hierarchical application levels. For instance, in the case of finite element simulations, various combinations of either degree of freedom, nodal, elemental, substructural, and global level iterations are possible. Overall, this enables a solution methodology which is highly stable and storage efficient. To demonstrate the capability of the constrained hierarchical least square methodology, benchmarking examples are presented which treat structure exhibiting highly nonlinear pre- and postbuckling behavior wherein several indefinite stiffness transitions occur.

  20. INFOGRAPHIC MODELING OF THE HIERARCHICAL STRUCTURE OF THE MANAGEMENT SYSTEM EXPOSED TO AN INNOVATIVE CONFLICT

    OpenAIRE

    Chulkov Vitaliy Olegovich; Rakhmonov Emomali Karimovich; Kas'yanov Vitaliy Fedorovich; Gusakova Elena Aleksandrovna

    2012-01-01

    This article deals with the infographic modeling of hierarchical management systems exposed to innovative conflicts. The authors analyze the facts that serve as conflict drivers in the construction management environment. The reasons for innovative conflicts include changes in hierarchical structures of management systems, adjustment of workers to new management conditions, changes in the ideology, etc. Conflicts under consideration may involve contradictions between requests placed by custom...

  1. Improved Bio-inspired Artificial Gecko Adhesive by Using Hierarchical Fibrillar Structures

    OpenAIRE

    Li, Yasong

    2014-01-01

    Geckos are well known for being rapid climbers that have long existed in nature. The reversible and reusable adhesive on their feet intrigues scientists to explore a bio-mimetic adhesive, which inherits the adhesion properties of the gecko’s adhesives. Recent advances in electron microscopy reveal the secret of gecko’s climbing ability: there are hierarchical fibrillar structures branching from the skin of their climbing feet. Sizes of these hierarchical fibrils range from micrometer to nanom...

  2. A novel method for a multi-level hierarchical composite with brick-and-mortar structure.

    Science.gov (United States)

    Brandt, Kristina; Wolff, Michael F H; Salikov, Vitalij; Heinrich, Stefan; Schneider, Gerold A

    2013-01-01

    The fascination for hierarchically structured hard tissues such as enamel or nacre arises from their unique structure-properties-relationship. During the last decades this numerously motivated the synthesis of composites, mimicking the brick-and-mortar structure of nacre. However, there is still a lack in synthetic engineering materials displaying a true hierarchical structure. Here, we present a novel multi-step processing route for anisotropic 2-level hierarchical composites by combining different coating techniques on different length scales. It comprises polymer-encapsulated ceramic particles as building blocks for the first level, followed by spouted bed spray granulation for a second level, and finally directional hot pressing to anisotropically consolidate the composite. The microstructure achieved reveals a brick-and-mortar hierarchical structure with distinct, however not yet optimized mechanical properties on each level. It opens up a completely new processing route for the synthesis of multi-level hierarchically structured composites, giving prospects to multi-functional structure-properties relationships.

  3. Structural Time Domain Identification Toolbox User's Guide

    DEFF Research Database (Denmark)

    Andersen, P.; Kirkegaard, Poul Henning; Brincker, Rune

    This manual describes the Structural Time Domain Identification toolbox for use with MA TLAB. This version of the tool box has been developed using the PC-based MA TLAB version 4.2c, but is compatible with prior versions of MATLAB and UNIX-based versions. The routines of the toolbox are the so-ca......-called m-files that can be executed from the MA TLAB command line prompt or built into other m-files....

  4. Organizational and Spatial Dynamics of Attentional Focusing in Hierarchically Structured Objects

    Science.gov (United States)

    Yeari, Menahem; Goldsmith, Morris

    2011-01-01

    Is the focusing of visual attention object-based, space-based, both, or neither? Attentional focusing latencies in hierarchically structured compound-letter objects were examined, orthogonally manipulating global size (larger vs. smaller) and organizational complexity (two-level structure vs. three-level structure). In a dynamic focusing task,…

  5. Obstacle Avoidance of a Mobile Robot with Hierarchical Structure

    Energy Technology Data Exchange (ETDEWEB)

    Park, Chan Gyu [Yeungnam College of Science and Technolgy, Taegu (Korea)

    2001-06-01

    This paper proposed a new hierarchical fuzzy-neural network algorithm for navigation of a mobile robot within unknown dynamic environment. Proposed navigation algorithm used the learning ability of the neural network and the feasibility of control highly nonlinear system of fuzzy theory. The proposed navigation algorithm used fuzzy algorithm for goal approach and fuzzy-network for effective collision avoidance. Some computer simulation results for a mobile robot equipped with ultrasonic range sensors show that the suggested navigation algorithm is very effective to escape in stationary and moving obstacles environment. (author). 11 refs., 14 figs., 2 tabs.

  6. Hierarchical involvement of various GGDEF domain proteins in rdar morphotype development of Salmonella enterica serovar Typhimurium.

    Science.gov (United States)

    Kader, Abdul; Simm, Roger; Gerstel, Ulrich; Morr, Michael; Römling, Ute

    2006-05-01

    GGDEF and EAL domain proteins are involved in the turnover of the novel secondary messenger cyclic-di(3'-->5')-guanylic acid (c-di-GMP) in many bacteria. In this work the role of the 12 GGDEF domain proteins encoded by the Salmonella enterica serovar Typhimurium (S. Typhimurium) chromosome in rdar morphotype development was investigated. Previously, it was shown that the GGDEF domain protein AdrA activated the biosynthesis of cellulose by production of c-di-GMP. Enhancement of the c-di-GMP levels by overexpression of the GGDEF domain protein AdrA did lead to the activation of curli fimbriae biosynthesis through the elevated expression of CsgD and CsgA. Although knock-out of the chromosomal copy of adrA influenced CsgA expression, CsgD expression was not altered, although more than half of the total cellular c-di-GMP was produced by AdrA at 16 h of growth. On the other hand, chromosomally encoded GGDEF-EAL domain proteins STM2123 and STM3388 were required to additively activate CsgD expression on a transcriptional and post-transcriptional level. Enhanced c-di-GMP levels did overcome temperature regulation of rdar morphotype expression by activation of curli fimbriae as well as cellulose biosynthesis through CsgD expression. Thus in the regulatory cascade leading to rdar morphotype expression c-di-GMP activates several subsequent steps in the network.

  7. Origin of Hierarchical Structures of Quark and Lepton Mass Matrices

    CERN Document Server

    Koide, Yoshio

    2015-01-01

    It is shown that the so-called "Yukawaon" model can give a unified description of masses, mixing and $CP$ violation parameters of quarks and leptons without using any hierarchical (family number-dependent) parameters besides the charged lepton masses. Here, we have introduced a phase matrix $P={\\rm daig}(e^{i \\phi_1}, e^{i \\phi_2}, e^{i \\phi_3})$ with the phase parameters $(\\phi_1, \\phi_2, \\phi_3)$ which are described in terms of family number-independent parameters, together with using only the charged lepton mass parameters as the family number-dependent parameters. In this paper, the $CP$ violating phase parameters $\\delta_{CP}^q$ and $\\delta_{CP}^\\ell$ in the standard expression of $V_{CKM}$ and $U_{PMNS}$ are predicted as $\\delta_{CP}^q \\simeq 72^\\circ$ and $\\delta_{CP}^\\ell \\simeq -76^\\circ$, respectively, i.e. $\\delta_{CP}^\\ell \\sim - \\delta_{CP}^q$.

  8. Children's Knowledge of Hierarchical Phrase Structure: Quantifier Floating in Japanese

    Science.gov (United States)

    Suzuki, Takaaki; Yoshinaga, Naoko

    2013-01-01

    The interpretation of floating quantifiers in Japanese requires knowledge of hierarchical phrase structure. However, the input to children is insufficient or even misleading, as our analysis indicates. This presents an intriguing question on learnability: do children interpret floating quantifiers based on a structure-dependent rule which is not…

  9. Examining the Factor Structure and Hierarchical Nature of the Quality of Life Construct

    Science.gov (United States)

    Wang, Mian; Schalock, Robert L.; Verdugo, Miguel A.; Jenaro, Christina

    2010-01-01

    There is considerable debate in the area of individual quality of life research regarding the factor structure and hierarchical nature of the quality of life construct. Our purpose in this study was to test via structural equation modeling an a priori quality of life model consisting of eight first-order factors and one second-order factor. Data…

  10. A Hierarchical Linear Model with Factor Analysis Structure at Level 2

    Science.gov (United States)

    Miyazaki, Yasuo; Frank, Kenneth A.

    2006-01-01

    In this article the authors develop a model that employs a factor analysis structure at Level 2 of a two-level hierarchical linear model (HLM). The model (HLM2F) imposes a structure on a deficient rank Level 2 covariance matrix [tau], and facilitates estimation of a relatively large [tau] matrix. Maximum likelihood estimators are derived via the…

  11. Hierarchical Structure, Disassortativity and Information Measures of the US Flight Network

    Institute of Scientific and Technical Information of China (English)

    WANG Ru; CAI Xu

    2005-01-01

    @@ We investigate the mixing structure of directed and evolutionary US flight network. It is shown that such a network is a hierarchical network, with average assortativity coefficient -0.37. Application of the informationbased method that can give the same result provides a way to explore the structure of complex networks.

  12. Asymmetric block copolymer membranes with ultrahigh porosity and hierarchical pore structure by plain solvent evaporation

    KAUST Repository

    Yu, H.

    2016-09-14

    Membranes with a hierarchical porous structure could be manufactured from a block copolymer blend by pure solvent evaporation. Uniform pores in a 30 nm thin skin layer supported by a macroporous structure were formed. This new process is attractive for membrane production because of its simplicity and the lack of liquid waste.

  13. Hierarchical structure graphitic-like/MoS2 film as superlubricity material

    Science.gov (United States)

    Gong, Zhenbin; Jia, Xiaolong; Ma, Wei; Zhang, Bin; Zhang, Junyan

    2017-08-01

    Friction and wear result in a great amount of energy loss and the invalidation of mechanical parts, thus it is necessary to minimize friction in practical application. In this study, the graphitic-like/MoS2 films with hierarchical structure were synthesized by the combination of pulse current plasma chemical-vapor deposition and medium frequency unbalanced magnetron sputtering in preheated environment. This hierarchical structure composite with multilayer nano sheets endows the films excellent tribological performance, which easily achieves macro superlubricity (friction coefficient ∼0.004) under humid air. Furthermore, it is expected that hierarchical structure of graphitic-like/MoS2 films could match the requirements of large scale, high bear-capacity and wear-resistance of actual working conditions, which could be widely used in the industrial production as a promising superlubricity material.

  14. Hierarchical structure for audio-video based semantic classification of sports video sequences

    Science.gov (United States)

    Kolekar, M. H.; Sengupta, S.

    2005-07-01

    A hierarchical structure for sports event classification based on audio and video content analysis is proposed in this paper. Compared to the event classifications in other games, those of cricket are very challenging and yet unexplored. We have successfully solved cricket video classification problem using a six level hierarchical structure. The first level performs event detection based on audio energy and Zero Crossing Rate (ZCR) of short-time audio signal. In the subsequent levels, we classify the events based on video features using a Hidden Markov Model implemented through Dynamic Programming (HMM-DP) using color or motion as a likelihood function. For some of the game-specific decisions, a rule-based classification is also performed. Our proposed hierarchical structure can easily be applied to any other sports. Our results are very promising and we have moved a step forward towards addressing semantic classification problems in general.

  15. Leading virtual teams: hierarchical leadership, structural supports, and shared team leadership.

    Science.gov (United States)

    Hoch, Julia E; Kozlowski, Steve W J

    2014-05-01

    Using a field sample of 101 virtual teams, this research empirically evaluates the impact of traditional hierarchical leadership, structural supports, and shared team leadership on team performance. Building on Bell and Kozlowski's (2002) work, we expected structural supports and shared team leadership to be more, and hierarchical leadership to be less, strongly related to team performance when teams were more virtual in nature. As predicted, results from moderation analyses indicated that the extent to which teams were more virtual attenuated relations between hierarchical leadership and team performance but strengthened relations for structural supports and team performance. However, shared team leadership was significantly related to team performance regardless of the degree of virtuality. Results are discussed in terms of needed research extensions for understanding leadership processes in virtual teams and practical implications for leading virtual teams.

  16. Fabrication of semi-transparent super-hydrophobic surface based on silica hierarchical structures

    KAUST Repository

    Chen, Ping-Hei

    2011-01-01

    This study successfully develops a versatile method of producing superhydrophobic surfaces with micro/nano-silica hierarchical structures on glass surfaces. Optically transparent super hydrophobic silica thin films were prepared by spin-coating silica particles suspended in a precursor solution of silane, ethanol, and H2O with molar ratio of 1:4:4. The resulting super hydrophobic films were characterized by scanning electron microscopy (SEM), optical transmission, and contact angle measurements. The glass substrates in this study were modified with different particles: micro-silica particles, nano-silica particles, and hierarchical structures. This study includes SEM micrographs of the modified glass surfaces with hierarchical structures at different magnifications. © 2011 The Korean Society of Mechanical Engineers and Springer-Verlag Berlin Heidelberg.

  17. Using light to guide the motion of nanorods in photoresponsive binary blends: designing hierarchically structured nanocomposites.

    Science.gov (United States)

    Liu, Ya; Kuksenok, Olga; Balazs, Anna C

    2013-10-15

    One of the challenges in creating high-performance polymer nanocomposites is establishing effective routes for tailoring the morphology of both the polymer mixture and the dispersed nanoparticles, which contribute desirable optical, electrical, and mechanical properties. Using computational modeling, we devise an effective method for simultaneously controlling the spatial regularity of the polymer phases and the distribution of the rods within this matrix. We focus on mixtures of photosensitive AB binary blends and A-coated nanorods; in the presence of light, the binary blends undergo a reversible chemical reaction and phase separation to yield a morphology resembling that of microphase-separated diblock copolymers. We simulate the effects of illuminating this sample with a uniform background light and a higher intensity, spatially localized light, which is rastered over the sample with a velocity v. The resulting material displays a periodically ordered, essentially defect-free morphology, with the A-like nanoparticles localized in lamellar A domains. The dynamic behavior of the rods within this system can be controlled by varying the velocity v and Γ2, the reaction rate coefficient produced by the higher intensity light. Specifically, the rastering light can drive the rods to be "pushed" along the lamellar domains or oriented perpendicular to these stripes. Given these attributes, we isolate scenarios where the system encompasses a complex hierarchical structure, with rods that are simultaneously ordered along two distinct directions within the periodic matrix. Namely, the rods form long nanowires that span the length of the sample and lie perpendicular to these wires in regularly spaced A lamellae. Hence, our approach points to new routes for producing self-organized rectangular grids, which can impart remarkable optoelectronic or mechanical properties to the materials.

  18. Hierarchic structure formation in binary and ternary polymer blends

    NARCIS (Netherlands)

    Sprenger, M; Walheim, S; Budkowski, A; Steiner, U

    The phase morphology of multi-component polymer blends is governed by the interfacial interactions of its components. We discuss here the domain morphology in thin films of model binary and ternary polymer blends containing polystyrene, poly(methyl metacrylate), and poly(2-vinylpyridine) (PS, PMMA,

  19. Hierarchical Specification of Pruriceptors by Runt-Domain Transcription Factor Runx1.

    Science.gov (United States)

    Qi, Lu; Huang, Chengcheng; Wu, Xiaohua; Tao, Yeqi; Yan, Jingjing; Shi, Tianyong; Cao, Cheng; Han, Lu; Qiu, Mengsheng; Ma, Qiufu; Liu, Zijing; Liu, Yang

    2017-05-31

    The somatic sensory neurons in dorsal root ganglia (DRG) detect and transmit a diverse array of sensory modalities, such as pain, itch, cold, warm, touch, and others. Recent genetic and single-cell RNA sequencing studies have revealed a group of DRG neurons that could be particularly relevant for acute and chronic itch information transmission. They express the natriuretic peptide type B (NPPB), as well as a cohort of receptors and neuropeptides that have been implicated in chronic itch manifestation, including the interleukin-31 receptor A (IL-31ra) and its coreceptor oncostatin M receptor (Osmr), the cysteinyl leukotriene receptor 2 (Cysltr2), somatostatin, and neurotensin. However, how these neurons are generated during development remains unclear. Here we report that Runx1 is required to establish all these molecular features of NPPB(+) neurons. We further show that while early embryonic Runx1 activity is required for the formation of NPPB(+) cells, at later stages Runx1 switches to a genetic repressor and thus its downregulation becomes a prerequisite for the proper development of these pruriceptors. This mode by Runx1 is analogous to that in controlling another group of pruriceptors that specifically express the chloroquine receptor MrgprA3. Finally, behavioral studies using both sexes of mice revealed marked deficits in processing acute and chronic itch in Runx1 conditional knock-out mice, possibly attributable to impaired development of various pruriceptors.SIGNIFICANCE STATEMENT Our studies reveal a generalized control mode by Runx1 for pruriceptor development and consolidate a hierarchical control mechanism for the formation of sensory neurons transmitting distinct modalities. Among dorsal root ganglion neurons that initially express the neurotrophin receptor TrkA, Runx1 is necessary for the proper development of those neurons that innervate tissues derived from the ectoderm such as skin epidermis and hair follicles. These Runx1-dependent cutaneous

  20. Construction of super-hydrophobic iron with a hierarchical surface structure

    Science.gov (United States)

    Yuan, Zhiqing; Bin, Jiping; Wang, Xian; Wang, Menglei; Peng, Chaoyi; Xing, Suli; Xiao, Jiayu; Zeng, Jingcheng; Xiao, Ximei; Fu, Xin

    2014-04-01

    Wettability of an iron surface is crucial for the wide applications of iron in practice. In this work, a hierarchical structure highly similar to that of the underside of a bamboo leaf was constructed on an iron surface via the template method and controllable etching. After modification by stearic acid, the iron surface with hierarchical structure showed excellent water repellency, with an average contact angle of 156° and a sliding angle of 3°. X-ray diffraction (XRD) techniques and Fourier transform infrared spectroscopy (FTIR) are applied to examine the chemical components of an iron surface.

  1. Multi-scaling hierarchical structure analysis on the sequence of E. coli complete genome

    Institute of Scientific and Technical Information of China (English)

    2001-01-01

    We have applied the newly developed hierarchical structure theory for complex systems to analyze the multi-scaling structures of the nucleotide density distribution along a linear DNA sequence from the complete Escherichia coli genome. The hierarchical symmetry in the nucleotide density distribution was demonstrated. In particular, we have shown that the G, C density distribution that represents a strong H-bonding between the two DNA chains is more coherent with smaller similarity parameter compared to that of A, T density distribution, indicating a better organized multi-scaling fluctuation field for G, C density distribution along the genome sequence. The biological significance of these findings is under investigation.

  2. A spatial analysis of hierarchical waste transport structures under growing demand.

    Science.gov (United States)

    Tanguy, Audrey; Glaus, Mathias; Laforest, Valérie; Villot, Jonathan; Hausler, Robert

    2016-10-01

    The design of waste management systems rarely accounts for the spatio-temporal evolution of the demand. However, recent studies suggest that this evolution affects the planning of waste management activities like the choice and location of treatment facilities. As a result, the transport structure could also be affected by these changes. The objective of this paper is to study the influence of the spatio-temporal evolution of the demand on the strategic planning of a waste transport structure. More particularly this study aims at evaluating the effect of varying spatial parameters on the economic performance of hierarchical structures (with one transfer station). To this end, three consecutive generations of three different spatial distributions were tested for hierarchical and non-hierarchical transport structures based on costs minimization. Results showed that a hierarchical structure is economically viable for large and clustered spatial distributions. The distance parameter was decisive but the loading ratio of trucks and the formation of clusters of sources also impacted the attractiveness of the transfer station. Thus the territories' morphology should influence strategies as regards to the installation of transfer stations. The use of spatial-explicit tools such as the transport model presented in this work that take into account the territory's evolution are needed to help waste managers in the strategic planning of waste transport structures.

  3. Controlled Fabrication of Flower-like Nickel Oxide Hierarchical Structures and Their Application in Water Treatment

    Directory of Open Access Journals (Sweden)

    Linxia Wang

    2012-01-01

    Full Text Available Flower-like NiO hierarchical structures with 2–5 μm diameter assembled from nanosheet building blocks have been successfully fabricated via a wet-chemical method combined with thermodecomposition technology. The template-free method is facile and effective in preparing flower-like NiO superstructures in high yield. The intermediate product and final hierarchical structures are characterized by transmission electron microscopy (TEM, scanning electron microscopy (SEM, X-ray diffraction (XRD, Fourier transform IR (FTIR, and thermogravimetric analysis (TGA. The effects of growth temperature and reaction time on the morphologies of the as-prepared structures were investigated by SEM characterization and a possible mechanism for the formation of flower-like NiO is proposed. Based on the nitrogen adsorption and desorption measurements, the BET surface area of the as-obtained sample is 55.7 m2/g and the pore-size distribution plot indicates a bimodal mesopore distribution, with pore sizes of ca. 2.6 nm and 7.4 nm, respectively. In comparison with sphere-like and rod-like structures, the flower-like NiO hierarchical structures show an excellent ability to rapidly remove various pollutants when used as adsorbent and photocatalyst in waste-water treatment, which may be attributed to its unique hierarchical and porous surface structures.

  4. Joint Hierarchical Category Structure Learning and Large-Scale Image Classification

    Science.gov (United States)

    Qu, Yanyun; Lin, Li; Shen, Fumin; Lu, Chang; Wu, Yang; Xie, Yuan; Tao, Dacheng

    2017-09-01

    We investigate the scalable image classification problem with a large number of categories. Hierarchical visual data structures are helpful for improving the efficiency and performance of large-scale multi-class classification. We propose a novel image classification method based on learning hierarchical inter-class structures. Specifically, we first design a fast algorithm to compute the similarity metric between categories, based on which a visual tree is constructed by hierarchical spectral clustering. Using the learned visual tree, a test sample label is efficiently predicted by searching for the best path over the entire tree. The proposed method is extensively evaluated on the ILSVRC2010 and Caltech 256 benchmark datasets. Experimental results show that our method obtains significantly better category hierarchies than other state-of-the-art visual tree-based methods and, therefore, much more accurate classification.

  5. A Structural Approach to the Validation of Hierarchical Training Sequences

    Science.gov (United States)

    1981-06-01

    psychometric paradigm . For example, consider the case in which a group of individuals is trained on quadratic task I and then tested on that task and...cubic tasks. The domain hypothesis takes on a somewhat different meaning under the instructional validation paradigm than it has under the psychometric ... paradigm . In the psychometric validation case, tasks may be said to be in the same domiAn if data can be adequately represented by mastery, nonmastery

  6. Topology of the correlation networks among major currencies using hierarchical structure methods

    Science.gov (United States)

    Keskin, Mustafa; Deviren, Bayram; Kocakaplan, Yusuf

    2011-02-01

    We studied the topology of correlation networks among 34 major currencies using the concept of a minimal spanning tree and hierarchical tree for the full years of 2007-2008 when major economic turbulence occurred. We used the USD (US Dollar) and the TL (Turkish Lira) as numeraires in which the USD was the major currency and the TL was the minor currency. We derived a hierarchical organization and constructed minimal spanning trees (MSTs) and hierarchical trees (HTs) for the full years of 2007, 2008 and for the 2007-2008 period. We performed a technique to associate a value of reliability to the links of MSTs and HTs by using bootstrap replicas of data. We also used the average linkage cluster analysis for obtaining the hierarchical trees in the case of the TL as the numeraire. These trees are useful tools for understanding and detecting the global structure, taxonomy and hierarchy in financial data. We illustrated how the minimal spanning trees and their related hierarchical trees developed over a period of time. From these trees we identified different clusters of currencies according to their proximity and economic ties. The clustered structure of the currencies and the key currency in each cluster were obtained and we found that the clusters matched nicely with the geographical regions of corresponding countries in the world such as Asia or Europe. As expected the key currencies were generally those showing major economic activity.

  7. Fabrication and condensation characteristics of metallic superhydrophobic surface with hierarchical micro-nano structures

    Science.gov (United States)

    Chu, Fuqiang; Wu, Xiaomin

    2016-05-01

    Metallic superhydrophobic surfaces have various applications in aerospace, refrigeration and other engineering fields due to their excellent water repellent characteristics. This study considers a simple but widely applicable fabrication method using a two simultaneous chemical reactions method to prepare the acid-salt mixed solutions to process the metal surfaces with surface deposition and surface etching to construct hierarchical micro-nano structures on the surface and then modify the surface with low surface-energy materials. Al-based and Cu-based superhydrophobic surfaces were fabricated using this method. The Al-based superhydrophobic surface had a water contact angle of 164° with hierarchical micro-nano structures similar to the lotus leaves. The Cu-based surface had a water contact angle of 157° with moss-like hierarchical micro-nano structures. Droplet condensation experiments were also performed on these two superhydrophobic surfaces to investigate their condensation characteristics. The results show that the Al-based superhydrophobic surface has lower droplet density, higher droplet jumping probability, slower droplet growth rate and lower surface coverage due to the more structured hierarchical structures.

  8. Hierarchically structured polysulfone/titania fibrous membranes with enhanced air filtration performance.

    Science.gov (United States)

    Wan, Huigao; Wang, Na; Yang, Jianmao; Si, Yinsong; Chen, Kun; Ding, Bin; Sun, Gang; El-Newehy, Mohamed; Al-Deyab, Salem S; Yu, Jianyong

    2014-03-01

    Hierarchically structured, superhydrophobic filter medium exhibiting robust filtration performance to airborne particulate were prepared by a facile deposition of electrospun polysulfone/titania nanoparticles (PSU/TiO2 NPs) on a conventional nonwoven substrate. The air permeability, tensile strength and abrasion resistance of pristine PSU fibrous membranes could be finely controlled by regulating the solvent composition and number ratios of jets. By employing the TiO2 NPs incorporation, the pristine PSU fibers were endowed with promising superhydrophobicity with a water contact angle of up to 152°. The quantitative hierarchical roughness analysis using N2 adsorption method has confirmed the major contribution of TiO2 NPs on enhancing the porous structure and surface fractal features with irregular rough structure. Filtration performance studies have revealed that the filtration efficiency and pressure drop of resultant hybrid membranes could be manipulated by tuning the surface composition as well as the hierarchical structures. Furthermore, the as-prepared PSU/TiO2-5 membrane exhibited improved filtration efficiency (99.997%) and pressure drop (45.3 Pa) compared with pristine PSU membrane, which would make them a promising media for fine particle filtration, and a new insight was also provided into the design and development of high performance filter medium based on hierarchical structured fibers.

  9. Hierarchically structured nanocarbon electrodes for flexible solid lithium batteries

    KAUST Repository

    Wei, Di

    2013-09-01

    The ever increasing demand for storage of electrical energy in portable electronic devices and electric vehicles is driving technological improvements in rechargeable batteries. Lithium (Li) batteries have many advantages over other rechargeable battery technologies, including high specific energy and energy density, operation over a wide range of temperatures (-40 to 70. °C) and a low self-discharge rate, which translates into a long shelf-life (~10 years) [1]. However, upon release of the first generation of rechargeable Li batteries, explosions related to the shorting of the circuit through Li dendrites bridging the anode and cathode were observed. As a result, Li metal batteries today are generally relegated to non-rechargeable primary battery applications, because the dendritic growth of Li is associated with the charging and discharging process. However, there still remain significant advantages in realizing rechargeable secondary batteries based on Li metal anodes because they possess superior electrical conductivity, higher specific energy and lower heat generation due to lower internal resistance. One of the most practical solutions is to use a solid polymer electrolyte to act as a physical barrier against dendrite growth. This may enable the use of Li metal once again in rechargeable secondary batteries [2]. Here we report a flexible and solid Li battery using a polymer electrolyte with a hierarchical and highly porous nanocarbon electrode comprising aligned multiwalled carbon nanotubes (CNTs) and carbon nanohorns (CNHs). Electrodes with high specific surface area are realized through the combination of CNHs with CNTs and provide a significant performance enhancement to the solid Li battery performance. © 2013 Elsevier Ltd.

  10. Hierarchical structures in cold-drawn pearlitic steel wire

    DEFF Research Database (Denmark)

    Zhang, Xiaodan; Godfrey, Andrew; Hansen, Niels

    2013-01-01

    in the structure and crystallography when a randomly oriented cementite structure in a patented wire during wire drawing is transformed into a lamellar structure parallel to the drawing axis. Changes in the interlamellar spacing and in the misorientation angle along and across the ferrite lamellae show significant...

  11. Remarks on Hierarchic Control for a Linearized Micropolar Fluids System in Moving Domains

    Energy Technology Data Exchange (ETDEWEB)

    Jesus, Isaías Pereira de, E-mail: isaias@ufpi.edu.br [Universidade Federal do Piauí, Dpto. Matemática (Brazil)

    2015-12-15

    We study a Stackelberg strategy subject to the evolutionary linearized micropolar fluids equations in domains with moving boundaries, considering a Nash multi-objective equilibrium (non necessarily cooperative) for the “follower players” (as is called in the economy field) and an optimal problem for the leader player with approximate controllability objective. We will obtain the following main results: the existence and uniqueness of Nash equilibrium and its characterization, the approximate controllability of the linearized micropolar system with respect to the leader control and the existence and uniqueness of the Stackelberg–Nash problem, where the optimality system for the leader is given.

  12. Hierarchical structural nanopore arrays fabricated by pre-patterning aluminum using nanosphere lithography.

    Science.gov (United States)

    Wang, Xinnan; Xu, Shuping; Cong, Ming; Li, Haibo; Gu, Yuejiao; Xu, Weiqing

    2012-04-10

    A highly ordered and hierarchical structural nanopore array is fabricated via anodizing a pre-patterned aluminum foil under an optimized voltage. A pre-patterned hexagonal nanoindentation array on an aluminum substrate is prepared via the nanosphere lithography method. This pattern leads to an elaborate nanochannel structure with seven nanopores in each nanoindentation after anodization treatment. The structure achieved in our study is new, interesting, and likely to be applied in photonic devices.

  13. Mechanism and control of the structural evolution of a polymer solar cell from a bulk heterojunction to a thermally unstable hierarchical structure.

    Science.gov (United States)

    Chen, Charn-Ying; Tsao, Cheng-Si; Huang, Yu-Ching; Liu, Hung-Wei; Chiu, Wen-Yen; Chuang, Chih-Min; Jeng, U-Ser; Su, Chun-Jen; Wu, Wei-Ru; Su, Wei-Fang; Wang, Leeyih

    2013-08-21

    We simultaneously employed grazing incidence small-angle and wide-angle X-ray scattering (GISAXS and GIWAXS) techniques to quantitatively study the structural evolution and kinetic behavior of poly(3-hexylthiophene) (P3HT) crystallization, [6,6]-phenyl-C61-butyric acid methyl ester (PCBM) aggregation and amorphous P3HT/PCBM domains from a bulk heterojunction (BHJ) to a thermally unstable structure. The independent phase separation regimes on the nanoscale (∼10 nm), mesoscale (∼100 nm) and macroscale (∼μm) are revealed for the first time. Bis-PCBM molecules as inhibitors incorporated into the P3HT/PCBM blend films were adopted as a case study of a control strategy for improving the thermal stability of P3HT/PCBM solar cell. The detailed information on the formation, growth, transformation and mutual interaction between different phases during the hierarchical structural evolution of P3HT/PCBM:xbis-PCBM (x = 8-100%) blend films are presented herein. This systematic study proposes the mechanisms of thermal instability for a polymer/fullerene-based solar cell. We demonstrate a new fundamental concept that the structural evolution and thermal stability of mesoscale amorphous P3HT/PCBM domains during heating are the origin of controlling thermal instability rather than those of nanoscale thermally-stable BHJ structures. It leads to a low-cost and easy-fabrication control strategy for effectively tailoring the hierarchical morphology against thermal instability from molecular to macro scales. The optimum treatment achieving high thermal stability, control of mesoscale domains, can be effectively designed. It is independent of the original BHJ nanostructure design of a polymer/fullerene-based solar cell with high performance. It advances the general knowledge on the thermal instability directly arising from the nanoscale structure.

  14. Alpha-Helical Protein Domains Unify Strength and Robustness through Hierarchical Nanostructures

    Science.gov (United States)

    2009-01-23

    difference between many protein structures is the geometrical arrangement of H- bonds. H-bond rupture mechanisms can be seen as analogs to the nucleation of...and electronic nanodevices . The analysis shown here is for the needle of a T4 bacteriophage. Subplot (a) depicts the protein’s ribbon structure from two...materials and structures that mimic and exceed the properties found in biological analogs . The development of a fundamental science driven framework that

  15. Elaborately prepared hierarchical structure titanium dioxide for remarkable performance in lithium storage

    Science.gov (United States)

    Tian, Qinghua; Luo, Dong; Li, Xiaowei; Zhang, Zhengxi; Yang, Li; Hirano, Shin-ichi

    2016-05-01

    Titanium dioxide (TiO2) has been considered to be a promisingly alternative anode material for lithium-ion batteries and thus attracted wide research interest. But, its practical application in lithium-ion batteries is seriously impeded by low capacity and poor rate capability. In the present work, the electrochemical performance of TiO2 is significantly improved by elaborately fabricating hierarchical structures. These as-prepared four hierarchical structure TiO2 assembled by different building blocks (TO2-2 h, TO2-6 h, TO2-18 h and TO2-24 h) all exhibit impressed performance. More importantly, the TO2-6 h constructed by curved nanosheets exhibits the best performance, delivering a capacity of 231.6 mAh g-1 at 0.2C after 200 cycles, and capacities of 187.1 and 129.3 mAh g-1 at 1 and 10C after even 1200 cycles, respectively. The results indicated that design and fabrication of hierarchical structure is an effective strategy for significantly improving the electrochemical performance of TiO2 electrodes, and the electrochemical performance of hierarchical structure TiO2 is heavily dependent on its building blocks. It is suggested that thus excellent electrochemical performance may make TiO2-6 h a promising anode material for advanced lithium-ion batteries with high capacity, good rate capability and long life.

  16. Can Prosody Be Used to Discover Hierarchical Structure in Continuous Speech?

    Science.gov (United States)

    Langus, Alan; Marchetto, Erika; Bion, Ricardo Augusto Hoffmann; Nespor, Marina

    2012-01-01

    We tested whether adult listeners can simultaneously keep track of variations in pitch and syllable duration in order to segment continuous speech into phrases and group these phrases into sentences. The speech stream was constructed so that prosodic cues signaled hierarchical structures (i.e., phrases embedded within sentences) and non-adjacent…

  17. Symptom structure of PTSD: support for a hierarchical model separating core PTSD symptoms from dysphoria

    NARCIS (Netherlands)

    Rademaker, A.R.; Minnen, A. van; Ebberink, F.; Zuiden, M. van; Geuze, E.

    2012-01-01

    Background: As of yet, no collective agreement has been reached regarding the precise factor structure of posttraumatic stress disorder (PTSD). Several alternative factor-models have been proposed in the last decades. Objective: The current study examined the fit of a hierarchical adaptation of the

  18. A developmental model of hierarchical stage structure in objective moral judgements

    NARCIS (Netherlands)

    J. Boom; P.C.M. Molenaar

    1989-01-01

    A hierarchical structural model of moral judgment is proposed in which an S is characterized as occupying a particular moral stage. During development, the S's characteristic stage progresses along a latent, ordered dimension in an age-dependent way. Evaluation of prototypic statements representativ

  19. Task Switching in a Hierarchical Task Structure: Evidence for the Fragility of the Task Repetition Benefit

    Science.gov (United States)

    Lien, Mei-Ching; Ruthruff, Eric

    2004-01-01

    This study examined how task switching is affected by hierarchical task organization. Traditional task-switching studies, which use a constant temporal and spatial distance between each task element (defined as a stimulus requiring a response), promote a flat task structure. Using this approach, Experiment 1 revealed a large switch cost of 238 ms.…

  20. Hierarchical structures in cold-drawn pearlitic steel wire

    DEFF Research Database (Denmark)

    Zhang, Xiaodan; Godfrey, Andrew; Hansen, Niels

    2013-01-01

    The microstructure and crystallography of drawn pearlitic steel wires have been quantified by a number of electron microscopy techniques including scanning electron microscopy, transmission electron microscopy, electron backscatter diffraction and nanobeam diffraction, with focus on the change......, and high-angle boundaries form in the A_BC structure parallel to the cementite lamellae. The structural and crystallographic analyses suggest that boundary strengthening and dislocation strengthening are important mechanisms in the cold-drawn wire. However, differences in structural parameters between...

  1. Proton Conduction in Sulfonated Organic-Inorganic Hybrid Monoliths with Hierarchical Pore Structure.

    Science.gov (United States)

    von der Lehr, Martin; Seidler, Christopher F; Taffa, Dereje H; Wark, Michael; Smarsly, Bernd M; Marschall, Roland

    2016-09-28

    Porous organic-inorganic hybrid monoliths with hierarchical porosity exhibiting macro- and mesopores are prepared via sol-gel process under variation of the mesopore size. Organic moieties in the pore walls are incorporated by substituting up to 10% of the silicon precursor tetramethylorthosilicate with bisilylated benzene molecules. After functionalization with sulfonic acid groups, the resulting sulfonated hybrid monoliths featuring a bimodal pore structure are investigated regarding proton conduction depending on temperature and relative humidity. The hierarchical pore system and controlled mesopore design turn out to be crucial for sulfonation and proton conduction. These sulfonated hybrid hierarchical monoliths containing only 10% organic precursor exhibit higher proton conduction at different relative humidities than sulfonated periodic mesoporous organosilica made of 100% bisilylated precursors exhibiting solely mesopores, even with a lower concentration of sulfonic acid groups.

  2. Hierarchical cluster-tendency analysis of the group structure in the foreign exchange market

    Science.gov (United States)

    Wu, Xin-Ye; Zheng, Zhi-Gang

    2013-08-01

    A hierarchical cluster-tendency (HCT) method in analyzing the group structure of networks of the global foreign exchange (FX) market is proposed by combining the advantages of both the minimal spanning tree (MST) and the hierarchical tree (HT). Fifty currencies of the top 50 World GDP in 2010 according to World Bank's database are chosen as the underlying system. By using the HCT method, all nodes in the FX market network can be "colored" and distinguished. We reveal that the FX networks can be divided into two groups, i.e., the Asia-Pacific group and the Pan-European group. The results given by the hierarchical cluster-tendency method agree well with the formerly observed geographical aggregation behavior in the FX market. Moreover, an oil-resource aggregation phenomenon is discovered by using our method. We find that gold could be a better numeraire for the weekly-frequency FX data.

  3. Synthesis of nickel hierarchical structures and evaluation on their magnetic properties and Congo red removal ability.

    Science.gov (United States)

    Zhang, Guangshu; Zhao, Lijun

    2013-03-14

    Novel nickel hierarchical structures were prepared through a facile one-pot solvothermal approach in the presence of surfactant and mineralizer. The influence of dynamics factors such as polyvinylpyrrolidone (PVP) content, ratio (R) between NaF and NH(3)·H(2)O on the morphologies of the as-synthesized products were investigated in detail. By regulating the dynamics factors, nickel crystals with three different structures (hcp and fcc mixture structure, fcc structure and a mostly hcp structure) were synthesized. Meanwhile, the corresponding morphologies are changed from hierarchical structures composed of nanoparticles to hierarchical structures consisted of nanoflakes, and to polyhedra. The values of saturation magnetizations of nickel crystals also range from 41.6 to 8 emu g(-1) because of the change of crystal structure from fcc to mostly hcp. One thing to be mentioned is that the mostly hcp phase can be completely converted into fcc phase if the solvothermal treatment temperature is further enhanced to 220 °C. Further, the Congo red (CR) removal ability by the as-obtained nickel particles was evaluated. By the investigation of adsorption and desorption experiments on nickel powders, we can ascertain that chemical reduction and physical adsorption happen at the same time during the treatment process of CR solution.

  4. INFOGRAPHIC MODELING OF THE HIERARCHICAL STRUCTURE OF THE MANAGEMENT SYSTEM EXPOSED TO AN INNOVATIVE CONFLICT

    Directory of Open Access Journals (Sweden)

    Chulkov Vitaliy Olegovich

    2012-12-01

    Full Text Available This article deals with the infographic modeling of hierarchical management systems exposed to innovative conflicts. The authors analyze the facts that serve as conflict drivers in the construction management environment. The reasons for innovative conflicts include changes in hierarchical structures of management systems, adjustment of workers to new management conditions, changes in the ideology, etc. Conflicts under consideration may involve contradictions between requests placed by customers and the legislation, any risks that may originate from the above contradiction, conflicts arising from any failure to comply with any accepted standards of conduct, etc. One of the main objectives of the theory of hierarchical structures is to develop a model capable of projecting potential innovative conflicts. Models described in the paper reflect dynamic changes in patterns of external impacts within the conflict area. The simplest model element is a monad, or an indivisible set of characteristics of participants at the pre-set level. Interaction between two monads forms a diad. Modeling of situations that involve a different number of monads, diads, resources and impacts can improve methods used to control and manage hierarchical structures in the construction industry. However, in the absence of any mathematical models employed to simulate conflict-related events, processes and situations, any research into, projection and management of interpersonal and group-to-group conflicts are to be performed in the legal environment

  5. Reliability and Hierarchical Structure of DSM-5 Pathological Traits in a Danish Mixed Sample

    DEFF Research Database (Denmark)

    Bo, Sune; Bach, Bo; Mortensen, Erik Lykke

    2016-01-01

    In this study we assessed the DSM-5 trait model in a large Danish sample (n = 1,119) with respect to reliability of the applied Danish version of the Personality Inventory for DSM-5 (PID-5) self-report form by means of internal consistency and item discrimination. In addition, we tested whether...... the five-factor structure of the DSM-5 trait model can be replicated in a Danish independent sample using the PID-5 self-report form. Finally, we examined the hierarchical structure of DSM-5 traits. In terms of internal consistency and item discrimination, the applied PID-5 scales were generally found...... reliable and functional; our data resembled the five-factor structure of previous findings, and we identified a hierarchical structure from one to five factors that was conceptually reasonable and corresponded with existing findings. These results support the new DSM-5 trait model and suggest that it can...

  6. Optical and photocatalytic properties of Mn doped flower-like ZnO hierarchical structures

    Science.gov (United States)

    Ma, Qun; Lv, Xiangzhou; Wang, Yongqian; Chen, Jieyu

    2016-10-01

    A novel Mn doped flower-like ZnO hierarchical structures were successfully synthesized with a facile ion-exchange method. Structural properties of the synthesized photocatalysis have been investigated with XRD, FESEM equipped with energy dispersive spectroscopy, while UV-vis and PL spectroscopy were employed to study their optical properties. The inner structure of doped ZnO hierarchical structure can be finely transformed from nanosheets to nanorods and to nanoparticles with the increasing of doping contents. All the synthesized Mn/ZnO samples exhibit strong blue-violet emission. Furthermore, the optical absorption towards visible light of ZnO was significantly enhanced due to the incorporation of Mn ions. The photocatalytic results indicate that photocatalytic activity of ZnO was enhanced with the doping of Mn and there is an optimum Mn doping level, leading to the highest photocatalytic performance.

  7. Hierarchical structure and cytocompatibility of fish scales from Carassius auratus

    Energy Technology Data Exchange (ETDEWEB)

    Fang, Zhou [State Key Laboratory of New Ceramics and Fine Processing, School of Materials Science and Engineering, Tsinghua University, Beijing 100084 (China); Wang, Yukun [State Key Laboratory of Geological Processes and Mineral Resources, China University of Geosciences, Beijing 100084 (China); Feng, Qingling, E-mail: biomater@mail.tsinghua.edu.cn [State Key Laboratory of New Ceramics and Fine Processing, School of Materials Science and Engineering, Tsinghua University, Beijing 100084 (China); Key Laboratory of Advanced Materials of Ministry of Education of China, School of Materials Science and Engineering, Tsinghua University, Beijing 100084 (China); Kienzle, Arne; Müller, Werner E.G. [Institut für Physiologische Chemie, Abteilung Angewandte Molekularbiologie, Johannes Gutenberg-Universität, Duesbergweg 6, Mainz 55099 (Germany)

    2014-10-01

    To study the structure and the cytocompatibility of fish scales from Carassius auratus, scanning electron microscopy (SEM) was used to observe the morphology of fish scales treated with different processing methods. Based on varying morphologies and components, the fish scales can be divided into three regions on the surface and three layers in vertical. The functions of these three individual layers were analyzed. SEM results show that the primary inorganic components are spherical or cubic hydroxyapatite (HA) nanoparticles. The fish scales have an ∼ 60° overlapped plywood structure of lamellas in the fibrillary plate. The plywood structure consists of co-aligned type I collagen fibers, which are parallel to the HA lamellas. X-ray diffraction (XRD), thermogravimetric analysis/differential scanning calorimetry (TGA/DSC) and Fourier transform infrared (FTIR) analysis indicate that the main components are HA and type I collagen fibers. MC3T3-E1 cell culture results show a high cytocompatibility and the ability to guide cell proliferation and migration along the scale ridge channels of the fish scales. This plywood structure provides inspiration for a structure-enhanced composite material. - Highlights: • The Carassius auratus fish scale can be divided into 3 layers rather than 2. • The functions of these three individual layers were firstly analyzed. • The fish scale shows a high cytocompatibility. • The fish scale can guide cells migration along the scale ridge channels.

  8. Learning Hierarchical and Topographic Dictionaries with Structured Sparsity

    CERN Document Server

    Mairal, Julien; Obozinski, Guillaume; Bach, Francis; 10.1117/12.893811

    2011-01-01

    Recent work in signal processing and statistics have focused on defining new regularization functions, which not only induce sparsity of the solution, but also take into account the structure of the problem. We present in this paper a class of convex penalties introduced in the machine learning community, which take the form of a sum of l_2 and l_infinity-norms over groups of variables. They extend the classical group-sparsity regularization in the sense that the groups possibly overlap, allowing more flexibility in the group design. We review efficient optimization methods to deal with the corresponding inverse problems, and their application to the problem of learning dictionaries of natural image patches: On the one hand, dictionary learning has indeed proven effective for various signal processing tasks. On the other hand, structured sparsity provides a natural framework for modeling dependencies between dictionary elements. We thus consider a structured sparse regularization to learn dictionaries embedde...

  9. Hierarchically structured titania films for application in photovoltaics

    Energy Technology Data Exchange (ETDEWEB)

    Niedermeier, M.A.; Kaune, G.; Mueller-Buschbaum, P. [TU Muenchen, Garching (Germany). Lehrstuhl fuer Funktionelle Materialien; Perlich, J. [TU Muenchen, Garching (Germany). Lehrstuhl fuer Funktionelle Materialien; DESY, Hamburg (Germany). HASYLAB; Memesa, M. [Max-Planck-Institut fuer Polymerforschung, Mainz (Germany); Gutmann, J.S. [Max-Planck-Institut fuer Polymerforschung, Mainz (Germany); Mainz Univ. (Germany). Inst. fuer Physikalische Chemie

    2010-07-01

    The fabrication of nanostructured titania films is investigated. The nanostructures are prepared using the diblock copolymer polystyrene-block-polyethyleneoxide (P(S-b-EO)) as a structure directing agent. Using repetitive sol-gel chemistry together with spin coating a thin polymer-nanocomposite film is deposited on silicon substrates which is calcined in air to obtain crystalline titania nanostructures. Furthermore, different types of morphologies are combined. The thus obtained structures are investigated regarding their morphologies, for example using imaging techniques like SEM. Additionally, information about the crystallinity is obtained with XRD. From our results we discuss the use of our films for photovoltaic applications. (orig.)

  10. Anisotropic domain structure of KTiOPO4 crystals

    Science.gov (United States)

    Urenski, P.; Lesnykh, M.; Rosenwaks, Y.; Rosenman, G.; Molotskii, M.

    2001-08-01

    Highly anisotropic ferroelectric domain structure is observed in KTiOPO4 (KTP) crystals reversed by low electric field. The applied Miller-Weinreich model for sidewise motion of domain walls indicates that this anisotropy results from the peculiarities of KTP crystal lattice. The domain nuclei of dozen nanometer size, imaged by atomic force microscopy method, demonstrate regular hexagonal forms. The orientation of domain walls of the elementary nuclei coincides with the orientation of the facets of macroscopic KTP crystals. The observed strong domain elongation along one principal crystal axis allows us to improve tailoring of ferroelectric domain engineered structures for nonlinear optical converters.

  11. Kendall’s tau and agglomerative clustering for structure determination of hierarchical Archimedean copulas

    Directory of Open Access Journals (Sweden)

    Górecki J.

    2017-01-01

    Full Text Available Several successful approaches to structure determination of hierarchical Archimedean copulas (HACs proposed in the literature rely on agglomerative clustering and Kendall’s correlation coefficient. However, there has not been presented any theoretical proof justifying such approaches. This work fills this gap and introduces a theorem showing that, given the matrix of the pairwise Kendall correlation coefficients corresponding to a HAC, its structure can be recovered by an agglomerative clustering technique.

  12. Exploring the hierarchical structure of the MMPI-2-RF Personality Psychopathology Five in psychiatric patient and university student samples.

    Science.gov (United States)

    Bagby, R Michael; Sellbom, Martin; Ayearst, Lindsay E; Chmielewski, Michael S; Anderson, Jaime L; Quilty, Lena C

    2014-01-01

    In this study our goal was to examine the hierarchical structure of personality pathology as conceptualized by Harkness and McNulty's (1994) Personality Psychopathology Five (PSY-5) model, as recently operationalized by the MMPI-2-RF (Ben-Porath & Tellegen, 2011) PSY-5r scales. We used Goldberg's (2006) "bass-ackwards" method to obtain factor structure using PSY-5r item data, successively extracting from 1 to 5 factors in a sample of psychiatric patients (n = 1,000) and a sample of university undergraduate students (n = 1,331). Participants from these samples had completed either the MMPI-2 or the MMPI-2-RF. The results were mostly consistent across the 2 samples, with some differences at the 3-factor level. In the patient sample a factor structure representing 3 broad psychopathology domains (internalizing, externalizing, and psychoticism) emerged; in the student sample the 3-factor level represented what is more commonly observed in "normal-range" personality models (negative emotionality, introversion, and disconstraint). At the 5-factor level the basic structure was similar across the 2 samples and represented well the PSY-5r domains.

  13. An XML-hierarchical data structure for ENSDF

    Energy Technology Data Exchange (ETDEWEB)

    Hurst, Aaron M. [Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States)

    2016-03-15

    A data structure based on an eXtensible Markup Language (XML) hierarchy according to experimental nuclear structure data in the Evaluated Nuclear Structure Data File (ENSDF) is presented. A Python-coded translator has been developed to interpret the standard one-card records of the ENSDF datasets, together with their associated quantities defined according to field position, and generate corresponding representative XML output. The quantities belonging to this mixed-record format are described in the ENSDF manual. Of the 16 ENSDF records in total, XML output has been successfully generated for 15 records. An XML-translation for the Comment Record is yet to be implemented; this will be considered in a separate phase of the overall translation effort. Continuation records, not yet implemented, will also be treated in a future phase of this work. Several examples are presented in this document to illustrate the XML schema and methods for handling the various ENSDF data types. However, the proposed nomenclature for the XML elements and attributes need not necessarily be considered as a fixed set of constructs. Indeed, better conventions may be suggested and a consensus can be achieved amongst the various groups of people interested in this project. The main purpose here is to present an initial phase of the translation effort to demonstrate the feasibility of interpreting ENSDF datasets and creating a representative XML-structured hierarchy for data storage.

  14. Hierarchical structure formation in supramolecular comb-shaped block copolymers

    NARCIS (Netherlands)

    Hofman, Anton; ten Brinke, Gerrit; Loos, Katja

    2016-01-01

    Block copolymers are known to spontaneously form ordered structures at the nano-to mesoscale. Although the number of different morphologies is rather limited in diblock copolymer systems, their phase behavior becomes increasingly more complex with each additional building block. Synthesis of such al

  15. Synthesis and structural characterization of two-dimensional hierarchical covellite nano-structures

    Energy Technology Data Exchange (ETDEWEB)

    Banerjee, Nirupam, E-mail: n.banerjee@utwente.nl [Materials Research Center, Indian Institute of Science, Bangalore 560012 (India); MESA Institute for Nanotechnology, University of Twente, Enschede (Netherlands); Krupanidhi, S.B., E-mail: sbk@mrc.iisc.ernet.in [Materials Research Center, Indian Institute of Science, Bangalore 560012 (India)

    2012-12-14

    We report a simple, template free and low-temperature hydrothermal reaction pathway using Cu(II) - thiourea complex (prepared in situ from copper (II) chloride and thiourea as precursors) and citric acid as complexing agent to synthesize two-dimensional hierarchical nano-structures of covellite (CuS). The product was characterized with the help of X-ray powder diffraction (XRD), scanning electron microscopy (SEM), energy dispersive analysis of X-ray spectroscopy (EDAX) and X-ray photoelectron spectroscopy (XPS). The concentration of citric acid in the hydrothermal precursor solution was seen to have a profound effect on the nanostructure of the product generated. Based on the outcoming product nano-architecture at different concentration of the ionic surfactant in the hydrothermal precursor solution a possible mechanism suited for reaction and further nucleation is also discussed. -- Highlights: Black-Right-Pointing-Pointer A novel reaction scheme is proposed for synthesizing covellite 2D nano-structures. Black-Right-Pointing-Pointer The nanostructures were thoroughly characterized, both structurally and chemically. Black-Right-Pointing-Pointer Through variation of synthetic parameters a general growth mechanism is proposed.

  16. Facile synthesis of Zn doped CuO hierarchical nanostructures: Structural, optical and antibacterial properties

    Energy Technology Data Exchange (ETDEWEB)

    Iqbal, Javed, E-mail: tariqjan84@gmail.com, E-mail: javed.suggau@iiu.edu.pk; Jan, Tariq, E-mail: tariqjan84@gmail.com, E-mail: javed.suggau@iiu.edu.pk; Ul-Hassan, Sibt; Umair Ali, M.; Abbas, Fazal [Laboratory of Nanoscience and Technology, Department of Physics, International Islamic University, H-10, Islamabad (Pakistan); Ahmed, Ishaq [Experimental Physics Labs, National Center for Physics, Islamabad (Pakistan); Mansoor, Qaisar; Ismail, Muhammad [Institute of Biomedical and Genetic Engineering (IBGE), Islamabad (Pakistan)

    2015-12-15

    Zn{sub x}Cu{sub 1−x}O (where x= 0, 0.01, 0.03, 0.05, 0.07 and 0.1 mol%) hierarchical nanostructures have been prepared via soft chemical route. X-ray diffraction (XRD) results of the synthesized samples reveal the monoclinic structure of CuO without any impurity related phases. The micro-structural parameters such as crystallite size and microstrain have been strongly influenced by Zn doping. Scanning electron microscope (SEM) analyses depict the formation of hierarchical nanostructures having average particle size in the range of 26-43 nm. The surface area of CuO nanostructures has been reduced systematically with the increase in Zn content which is linked with the variations in particle size. An obvious decrease in the optical band gap energy of the synthesized CuO hierarchical nanostructures has been observed with Zn doping which is assigned to the formation of shallow levels in the band gap of CuO and combined transition from oxygen 2p states to d sates of Cu and Zn ions. The bactericidal potency of the CuO hierarchical nanostructures have been found to be enhanced remarkably with Zn doping.

  17. Modular networks with hierarchical organization: The dynamical implications of complex structure

    Indian Academy of Sciences (India)

    Raj Kumar Pan; Sitabhra Sinha

    2008-08-01

    Several networks occurring in real life have modular structures that are arranged in a hierarchical fashion. In this paper, we have proposed a model for such networks, using a stochastic generation method. Using this model we show that, the scaling relation between the clustering and degree of the nodes is not a necessary property of hierarchical modular networks, as had previously been suggested on the basis of a deterministically constructed model. We also look at dynamics on such networks, in particular, the stability of equilibria of network dynamics and of synchronized activity in the network. For both of these, we find that, increasing modularity or the number of hierarchical levels tends to increase the probability of instability. As both hierarchy and modularity are seen in natural systems, which necessarily have to be robust against environmental fluctuations, we conclude that additional constraints are necessary for the emergence of hierarchical structure, similar to the occurrence of modularity through multi-constraint optimization as shown by us previously.

  18. Dielectric study on hierarchical water structures restricted in cement and wood materials

    Science.gov (United States)

    Abe, Fumiya; Nishi, Akihiro; Saito, Hironobu; Asano, Megumi; Watanabe, Seiei; Kita, Rio; Shinyashiki, Naoki; Yagihara, Shin; Fukuzaki, Minoru; Sudo, Seiichi; Suzuki, Youki

    2017-04-01

    Dielectric relaxation processes for mortar observed by broadband dielectric spectroscopy were analyzed in the drying and hydration processes for an aging sample in the frequency region from 1 MHz up to 2 MHz. At least two processes for structured water in the kHz frequency region and another mHz relaxation process affected by ionic behaviors were observed. Comparison of the relaxation parameters obtained for the drying and hydration processes suggests an existence of hierarchical water structures in the exchange of water molecules, which are originally exchanged from free water observed at around 20 GHz. The water molecules reflected in the lower frequency process of the two kHz relaxation processes are more restricted and take more homogeneous structures than the higher kHz relaxation process. These structured water usually hidden in large ionic behaviors for wood samples was observed by electrodes covered by a thin Teflon film, and hierarchical water structures were also suggested for wood samples. Dielectric spectroscopy technique is an effective tool to analyze the new concept of hierarchical water structures in complex materials.

  19. Hierarchical Structures from Inorganic Nanocrystal Self-Assembly for Photoenergy Utilization

    Directory of Open Access Journals (Sweden)

    Yun-Pei Zhu

    2014-01-01

    Full Text Available Self-assembly has emerged as a powerful strategy for controlling the structure and physicochemical properties of ensembles of inorganic nanocrystals. Hierarchical structures from nanocrystal assembly show collective properties that differ from individual nanocrystals and bulk samples. Incorporation of structural hierarchy into nanostructures is of great importance as a result of enhancing mass transportation, reducing resistance to diffusion, and high surface areas for adsorption and reaction, and thus much effort has been devoted to the exploration of various novel organizing schemes through which inorganic porous structure with architectural design can be created. In this paper, the recent research progress in this field is reviewed. The general strategies for the synthesis of hierarchical structures assembled from nanobuilding blocks are elaborated. The well-defined hierarchical structures provide new opportunities for optimizing, tuning, and/or enhancing the properties and performance of these materials and have found applications in photoenergy utilization including photodegradation, photocatalytic H2 production, photocatalytic CO2 conversion, and sensitized solar cells, and these are discussed illustratively.

  20. Prediction of Halocarbon Toxicity from Structure: A Hierarchical QSAR Approach

    Energy Technology Data Exchange (ETDEWEB)

    Gute, B D; Balasubramanian, K; Geiss, K; Basak, S C

    2003-04-11

    Mathematical structural invariants and quantum theoretical descriptors have been used extensively in quantitative structure-activity relationships (QSARs) for the estimation of pharmaceutical activities, biological properties, physicochemical properties, and the toxicities of chemicals. Recently our research team has explored the relative importance of various levels of chemodescriptors, i.e., topostructural, topochemical, geometrical, and quantum theoretical descriptors, in property estimation. This study examines the contribution of chemodescriptors ranging from topostructural to quantum theoretic calculations up to the Gaussian STO-3G level in the prediction of the toxicity of a set of twenty halocarbons. We also report the results of experimental cell-level toxicity studies on these twenty halocarbons to validate our models.

  1. Hierarchical Sets: Analyzing Pangenome Structure through Scalable Set Visualizations

    OpenAIRE

    Pedersen, Thomas Lin

    2017-01-01

    The increase in available microbial genome sequences has resulted in an increase in the size of the pangenomes being analyzed. Current pangenome visualizations are not intended for the pangenome sizes possible today and new approaches are necessary in order to convert the increase in available information to increase in knowledge. As the pangenome data structure is essentially a collection of sets we explore the potential for scalable set visualization as a tool for pangenome analysis. We pre...

  2. Fractal analysis of the hierarchic structure of fossil coal surface

    Energy Technology Data Exchange (ETDEWEB)

    Alekseev, A.D.; Vasilenko, T.A.; Kirillov, A.K. [National Academy of Sciences, Donetsk (Ukraine)

    2008-05-15

    The fractal analysis is described as method of studying images of surface of fossil coal, one of the natural sorbent, with the aim of determining its structural surface heterogeneity. The deformation effect as a reduction in the dimensions of heterogeneity boundaries is considered. It is shown that the theory of nonequilibrium dynamic systems permits to assess a formation level of heterogeneities involved into a sorbent composition by means of the Hurst factor.

  3. Mechanical Properties of Zirconium Ceramics with Hierarchical Porous Structure

    Science.gov (United States)

    Kulkov, S.; Shutilova, E.; Buyakova, S.

    2016-07-01

    The work studies porous ceramics produced from ultra-fine powders. The porosity of ceramic samples was from 15 to 80%. The ceramic materials had cellular structure. A distinctive feature of all deformation diagrams obtained in the experiment was their nonlinearity at low deformations, which was described by the parabolic law. It was shown that the observed nonlinear elasticity for low deformations on deformation diagrams is due to mechanical instability of cellular elements in a ceramic frame.

  4. Purification and Structural Analysis of LEM-Domain Proteins.

    Science.gov (United States)

    Herrada, Isaline; Bourgeois, Benjamin; Samson, Camille; Buendia, Brigitte; Worman, Howard J; Zinn-Justin, Sophie

    2016-01-01

    LAP2-emerin-MAN1 (LEM)-domain proteins are modular proteins characterized by the presence of a conserved motif of about 50 residues. Most LEM-domain proteins localize at the inner nuclear membrane, but some are also found in the endoplasmic reticulum or nuclear interior. Their architecture has been analyzed by predicting the limits of their globular domains, determining the 3D structure of these domains and in a few cases calculating the 3D structure of specific domains bound to biological targets. The LEM domain adopts an α-helical fold also found in SAP and HeH domains of prokaryotes and unicellular eukaryotes. The LEM domain binds to BAF (barrier-to-autointegration factor; BANF1), which interacts with DNA and tethers chromatin to the nuclear envelope. LAP2 isoforms also share an N-terminal LEM-like domain, which binds DNA. The structure and function of other globular domains that distinguish LEM-domain proteins from each other have been characterized, including the C-terminal dimerization domain of LAP2α and C-terminal WH and UHM domains of MAN1. LEM-domain proteins also have large intrinsically disordered regions that are involved in intra- and intermolecular interactions and are highly regulated by posttranslational modifications in vivo.

  5. Hierarchical surface atomic structure of a manganese-based spinel cathode for lithium-ion batteries.

    Science.gov (United States)

    Lee, Sanghan; Yoon, Gabin; Jeong, Minseul; Lee, Min-Joon; Kang, Kisuk; Cho, Jaephil

    2015-01-19

    The increasing use of lithium-ion batteries (LIBs) in high-power applications requires improvement of their high-temperature electrochemical performance, including their cyclability and rate capability. Spinel lithium manganese oxide (LiMn2O4) is a promising cathode material because of its high stability and abundance. However, it exhibits poor cycling performance at high temperatures owing to Mn dissolution. Herein we show that when stoichiometric lithium manganese oxide is coated with highly doped spinels, the resulting epitaxial coating has a hierarchical atomic structure consisting of cubic-spinel, tetragonal-spinel, and layered structures, and no interfacial phase is formed. In a practical application of the coating to doped spinel, the material retained 90% of its capacity after 800 cycles at 60 °C. Thus, the formation of an epitaxial coating with a hierarchical atomic structure could enhance the electrochemical performance of LIB cathode materials while preventing large losses in capacity.

  6. Structural and Histone Binding Ability Characterizations of Human PWWP Domains

    Energy Technology Data Exchange (ETDEWEB)

    Wu, Hong; Zeng, Hong; Lam, Robert; Tempel, Wolfram; Amaya, Maria F.; Xu, Chao; Dombrovski, Ludmila; Qiu, Wei; Wang, Yanming; Min, Jinrong (Toronto); (Penn)

    2013-09-25

    The PWWP domain was first identified as a structural motif of 100-130 amino acids in the WHSC1 protein and predicted to be a protein-protein interaction domain. It belongs to the Tudor domain 'Royal Family', which consists of Tudor, chromodomain, MBT and PWWP domains. While Tudor, chromodomain and MBT domains have long been known to bind methylated histones, PWWP was shown to exhibit histone binding ability only until recently. The PWWP domain has been shown to be a DNA binding domain, but sequence analysis and previous structural studies show that the PWWP domain exhibits significant similarity to other 'Royal Family' members, implying that the PWWP domain has the potential to bind histones. In order to further explore the function of the PWWP domain, we used the protein family approach to determine the crystal structures of the PWWP domains from seven different human proteins. Our fluorescence polarization binding studies show that PWWP domains have weak histone binding ability, which is also confirmed by our NMR titration experiments. Furthermore, we determined the crystal structures of the BRPF1 PWWP domain in complex with H3K36me3, and HDGF2 PWWP domain in complex with H3K79me3 and H4K20me3. PWWP proteins constitute a new family of methyl lysine histone binders. The PWWP domain consists of three motifs: a canonical {beta}-barrel core, an insertion motif between the second and third {beta}-strands and a C-terminal {alpha}-helix bundle. Both the canonical {beta}-barrel core and the insertion motif are directly involved in histone binding. The PWWP domain has been previously shown to be a DNA binding domain. Therefore, the PWWP domain exhibits dual functions: binding both DNA and methyllysine histones.

  7. Structure-function relationships in Macadamia integrifolia seed coats--fundamentals of the hierarchical microstructure.

    Directory of Open Access Journals (Sweden)

    Paul Schüler

    Full Text Available The shells/coats of nuts and seeds are often very hard to crack. This is particularly the case with Macadamia seed coats, known to exhibit astoundingly high strength and toughness. We performed an extensive materials science characterization of the complex hierarchical structure of these coats, using light and scanning electron microscopy in 2D as well as microCT for 3D characterization. We differentiate nine hierarchical levels that characterize the structure ranging from the whole fruit on the macroscopic scale down to the molecular scale. From a biological viewpoint, understanding the hierarchical structure may elucidate why it is advantageous for these seed coats to be so difficult to break. From an engineering viewpoint, microstructure characterization is important for identifying features that contribute to the high strength and cracking resistance of these objects. This is essential for revealing the underlying structure-function-relationships. Such information will help us develop engineering materials and lightweight-structures with improved fracture and puncture resistance.

  8. Hierarchical photonic structured stimuli-responsive materials as high-performance colorimetric sensors.

    Science.gov (United States)

    Lu, Tao; Zhu, Shenmin; Chen, Zhixin; Wang, Wanlin; Zhang, Wang; Zhang, Di

    2016-05-21

    Hierarchical photonic structures in nature are of special interest because they can be used as templates for fabrication of stimuli-responsive photonic crystals (PCs) with unique structures beyond man-made synthesis. The current stimuli-responsive PCs templated directly from natural PCs showed a very weak external stimuli response and poor durability due to the limitations of natural templates. Herein, we tackle this problem by chemically coating functional polymers, polyacrylamide, on butterfly wing scales which have hierarchical photonic structures. As a result of the combination of the strong water absorption properties of the polyacrylamide and the PC structures of the butterfly wing scales, the designed materials demonstrated excellent humidity responsive properties and a tremendous colour change. The colour change is induced by the refractive index change which is in turn due to the swollen nature of the polymer when the relative humidity changes. The butterfly wing scales also showed an excellent durability which is due to the chemical bonds formed between the polymer and wing scales. The synthesis strategy provides an avenue for the promising applications of stimuli-responsive PCs with hierarchical structures.

  9. Controllability of vortex domain structure in ferroelectric nanodot: fruitful domain patterns and transformation paths.

    Science.gov (United States)

    Wu, C M; Chen, W J; Zheng, Yue; Ma, D C; Wang, B; Liu, J Y; Woo, C H

    2014-02-04

    Ferroelectric vortex domain structure which exists in low-dimensional ferroelectrics is being intensively researched for future applications in functional nanodevices. Here we demonstrate that adjusting surface charge screening in combination with temperature can provide an efficient way to gain control of vortex domain structure in ferroelectric nanodot. Systematical simulating experiments have been conducted to reveal the stability and evolution mechanisms of domain structure in ferroelectric nanodot under various conditions, including processes of cooling-down/heating-up under different surface charge screening conditions, and increasing/decreasing surface charge screening at different temperatures. Fruitful phase diagrams as functions of surface screening and temperature are presented, together with evolution paths of various domain patterns. Calculations discover up to 25 different kinds of domain patterns and 22 typical evolution paths of phase transitions. The fruitful controllability of vortex domain structure by surface charge screening in combination with temperature should shed light on prospective nanodevice applications of low-dimensional ferroelectric nanostructures.

  10. Hierarchical ZnO with twinned structure: Morphology evolution, formation mechanism and properties

    Energy Technology Data Exchange (ETDEWEB)

    Shi, Ruixia; Song, Xueling; Li, Jia; Yang, Ping, E-mail: mse_yangp@ujn.edu.cn

    2015-04-15

    Various hierarchical ZnO architectures constructed by twinned structures have been synthesized via a trisodium citrate assisted hydrothermal method on a large scale. The probable formation mechanisms of hierarchical ZnO structures with twinned structure were proposed and discussed. The hierarchical ZnO with twinned structures are composed of two hemispheres with a center concave junction to join them together at their waists. The ZnO microspheres with rough surfaces were obtained when the concentration of trisodium citrate is 0.1 M. However, the football-like microspheres consisted of hexagonal nanosheets were formed when adding glycerol into the water, which should be attributed to the slower nucleation and growth rate of nanocrystals. The hamburger-like ZnO with different aspect ratio and nonuniform ZnO microspheres were generated due to the different quantity of initial nuclei and growth units when simply modulating the concentration of trisodium citrate. The surface area of football-like ZnO is about 3.51 times of microspheres composed of irregular particles. However their photocatalytic performances are similar under UV light irradiation, which indicates that pore sizes of the sample have more important influences on the photocatalytic activity. - Highlights: • Hierarchical ZnO constructed by twinned structures have been synthesized. • The formation mechanisms of ZnO with twinned structure were discussed. • Football-like microspheres were obtained due to the slower nucleation and growth. • Hamburger-like ZnO was formed due to the amount of initial nuclei and growth units. • Pore sizes have important effects on the photocatalytic activity of sample.

  11. Superhydrophobic hierarchically structured surfaces in biology: evolution, structural principles and biomimetic applications

    Science.gov (United States)

    Mail, M.; Neinhuis, C.

    2016-01-01

    A comprehensive survey of the construction principles and occurrences of superhydrophobic surfaces in plants, animals and other organisms is provided and is based on our own scanning electron microscopic examinations of almost 20 000 different species and the existing literature. Properties such as self-cleaning (lotus effect), fluid drag reduction (Salvinia effect) and the introduction of new functions (air layers as sensory systems) are described and biomimetic applications are discussed: self-cleaning is established, drag reduction becomes increasingly important, and novel air-retaining grid technology is introduced. Surprisingly, no evidence for lasting superhydrophobicity in non-biological surfaces exists (except technical materials). Phylogenetic trees indicate that superhydrophobicity evolved as a consequence of the conquest of land about 450 million years ago and may be a key innovation in the evolution of terrestrial life. The approximate 10 million extant species exhibit a stunning diversity of materials and structures, many of which are formed by self-assembly, and are solely based on a limited number of molecules. A short historical survey shows that bionics (today often called biomimetics) dates back more than 100 years. Statistical data illustrate that the interest in biomimetic surfaces is much younger still. Superhydrophobicity caught the attention of scientists only after the extreme superhydrophobicity of lotus leaves was published in 1997. Regrettably, parabionic products play an increasing role in marketing. This article is part of the themed issue ‘Bioinspired hierarchically structured surfaces for green science’. PMID:27354736

  12. Superhydrophobic hierarchically structured surfaces in biology: evolution, structural principles and biomimetic applications.

    Science.gov (United States)

    Barthlott, W; Mail, M; Neinhuis, C

    2016-08-06

    A comprehensive survey of the construction principles and occurrences of superhydrophobic surfaces in plants, animals and other organisms is provided and is based on our own scanning electron microscopic examinations of almost 20 000 different species and the existing literature. Properties such as self-cleaning (lotus effect), fluid drag reduction (Salvinia effect) and the introduction of new functions (air layers as sensory systems) are described and biomimetic applications are discussed: self-cleaning is established, drag reduction becomes increasingly important, and novel air-retaining grid technology is introduced. Surprisingly, no evidence for lasting superhydrophobicity in non-biological surfaces exists (except technical materials). Phylogenetic trees indicate that superhydrophobicity evolved as a consequence of the conquest of land about 450 million years ago and may be a key innovation in the evolution of terrestrial life. The approximate 10 million extant species exhibit a stunning diversity of materials and structures, many of which are formed by self-assembly, and are solely based on a limited number of molecules. A short historical survey shows that bionics (today often called biomimetics) dates back more than 100 years. Statistical data illustrate that the interest in biomimetic surfaces is much younger still. Superhydrophobicity caught the attention of scientists only after the extreme superhydrophobicity of lotus leaves was published in 1997. Regrettably, parabionic products play an increasing role in marketing.This article is part of the themed issue 'Bioinspired hierarchically structured surfaces for green science'. © 2016 The Author(s).

  13. Ultrahigh stress and strain in hierarchically structured hollow nanoparticles

    Science.gov (United States)

    Shan, Z. W.; Adesso, G.; Cabot, A.; Sherburne, M. P.; Syed Asif, S. A.; Warren, O. L.; Chrzan, D. C.; Minor, A. M.; Alivisatos, A. P.

    2008-12-01

    Nanocrystalline materials offer very high strength but are typically limited in their strain to failure, and efforts to improve deformability in these materials are usually found to be at the expense of strength. Using a combination of quantitative in situ compression in a transmission electron microscope and finite-element analysis, we show that the mechanical properties of nanoparticles can be directly measured and interpreted on an individual basis. We find that nanocrystalline CdS synthesized into a spherical shell geometry is capable of withstanding extreme stresses (approaching the ideal shear strength of CdS). This unusual strength enables the spherical shells to exhibit considerable deformation to failure (up to 20% of the sphere's diameter). By taking into account the structural hierarchy intrinsic to novel nanocrystalline materials such as this, we show it is possible to achieve and characterize the ultrahigh stresses and strains that exist within a single nanoparticle during deformation.

  14. A Generic Identification Scheme for Hierarchically Structured Objects

    Institute of Scientific and Technical Information of China (English)

    ChristianArnault; StanBentvelsen; 等

    2001-01-01

    The detector description database,the event data structure,the condition database are all examples(among others)of complex collections of objects which need to be unambiguously identified,not only internally to their own management structure.but also from one collection to the other.The requirements for such an identification scheme include the management of identifiers individually attached to each collected object,the possibility to formally spectify these identifiers (eg through dictionaries),to generate optimised and compact representations for these identifiers and to be able to use them as sorting and searching keys.we present here the generic toolkit developed in the context of the Atlas experiment to primarily provide the identification of the readout elements of the detector.This toolkit offers several either generic or specialized component such as:an XML based dictionary with which the formal specification of a particular object collection is expressed,a set of various binary representations for identifier objects(offering various level of compaction),range operators meant to manipulate ranges of identifiers,and finally a collection manager similar to the STL map but optimised for an organization keyed by Identifiers.All these components easily interoperate.In Particular the Identifier didctionary offers means of specifying permitted cardinalities of objects at each level of the hierarchy,This can then be translated into Identifier Ranges or can be used as the strategy driver for high compactification of the identifiers(e.g.to store very large number of identified objects).Current use of this toolkit within the detector description will be presented,and expected or possible other usages will be discussed.

  15. Hierarchical structure of the Sicilian goats revealed by Bayesian analyses of microsatellite information.

    Science.gov (United States)

    Siwek, M; Finocchiaro, R; Curik, I; Portolano, B

    2011-02-01

    Genetic structure and relationship amongst the main goat populations in Sicily (Girgentana, Derivata di Siria, Maltese and Messinese) were analysed using information from 19 microsatellite markers genotyped on 173 individuals. A posterior Bayesian approach implemented in the program STRUCTURE revealed a hierarchical structure with two clusters at the first level (Girgentana vs. Messinese, Derivata di Siria and Maltese), explaining 4.8% of variation (amovaФ(ST) estimate). Seven clusters nested within these first two clusters (further differentiations of Girgentana, Derivata di Siria and Maltese), explaining 8.5% of variation (amovaФ(SC) estimate). The analyses and methods applied in this study indicate their power to detect subtle population structure.

  16. Complexity of major UK companies between 2006 and 2010: Hierarchical structure method approach

    Science.gov (United States)

    Ulusoy, Tolga; Keskin, Mustafa; Shirvani, Ayoub; Deviren, Bayram; Kantar, Ersin; Çaǧrı Dönmez, Cem

    2012-11-01

    This study reports on topology of the top 40 UK companies that have been analysed for predictive verification of markets for the period 2006-2010, applying the concept of minimal spanning tree and hierarchical tree (HT) analysis. Construction of the minimal spanning tree (MST) and the hierarchical tree (HT) is confined to a brief description of the methodology and a definition of the correlation function between a pair of companies based on the London Stock Exchange (LSE) index in order to quantify synchronization between the companies. A derivation of hierarchical organization and the construction of minimal-spanning and hierarchical trees for the 2006-2008 and 2008-2010 periods have been used and the results validate the predictive verification of applied semantics. The trees are known as useful tools to perceive and detect the global structure, taxonomy and hierarchy in financial data. From these trees, two different clusters of companies in 2006 were detected. They also show three clusters in 2008 and two between 2008 and 2010, according to their proximity. The clusters match each other as regards their common production activities or their strong interrelationship. The key companies are generally given by major economic activities as expected. This work gives a comparative approach between MST and HT methods from statistical physics and information theory with analysis of financial markets that may give new valuable and useful information of the financial market dynamics.

  17. Microwave-assisted synthesis and characterization of hierarchically structured calcium fluoride

    Energy Technology Data Exchange (ETDEWEB)

    Yang, Zhenxing [School of Chemistry and Materials Science, Huaibei Normal University, Huaibei 235000 (China); Wang, Guangjian, E-mail: wgj2260@chnu.edu.cn [School of Chemistry and Materials Science, Huaibei Normal University, Huaibei 235000 (China); Guo, Yajie; Kang, Fangfang; Huang, Yanhong; Bo, Dongsheng [School of Chemistry and Materials Science, Huaibei Normal University, Huaibei 235000 (China)

    2012-12-15

    Graphical abstract: CaF{sub 2} with different morphologies and hierarchical structure such as dendrites, spherical and cube was prepared under microwave-assisted condition by a simple solvothermal synthesis route using CaCl{sub 2} and [BMIM]BF{sub 4} as initial reagents, respectively. It was found that the species of precursor was of vital importance for the formation of CaF{sub 2} crystals. That is, precursors itself also acted as structure directing agent. The outstanding features of the approach to obtain hierarchical structure CaF{sub 2} were its simplicity, effectiveness and ease of assembly. On the basis of the experimental results, a possible growth mechanism of the CaF{sub 2} crystals was proposed. Display Omitted Highlights: ► CaF{sub 2} with hierarchical structure was synthesized under microwave-assisted conditions. ► Characteristic morphologies with cube, dendrite, hierarchical sphere, etc. were observed. ► Thin cubes assembled into a spherical structure. ► Ionic liquid of [BMIM]BF{sub 4} was fluorine source. ► Possible growth mechanisms of CaF{sub 2} crystals were discussed. -- Abstract: CaF{sub 2} with different morphologies and hierarchical structures was prepared under microwave-assisted condition by a simple hydrothermal route using CaCl{sub 2} and ionic liquid [BMIM]BF{sub 4} as initial reagents, respectively. It was found that both the precursor and pH values played an important role in the formation of CaF{sub 2} crystals with different morphologies. The results suggested that the CaF{sub 2} with cube and spherical structures was obtained at different pH values (4, 8, 11), while the CaF{sub 2} with dendrite shape was formed through an oriented self-assembly growth using (NH{sub 4}){sub 2}HPO{sub 4} as a structure directing agent. Scanning electron microscope observation showed that the as-prepared CaF{sub 2} was of three-dimensional eight-horn-shaped dendritic structure. The influence of the pH values for the reaction solution and

  18. Assessing the multidimensional and hierarchical structure of SERVQUAL.

    Science.gov (United States)

    Ma, Jun; Harvey, Milton E; Hu, Michael Y

    2007-10-01

    Parasuraman, Zeithaml, and Berry introduced SERVQUAL in 1998 as a scale to measure service quality. Since then, researchers have proposed several variations. This study examines the development of the tool. Marketing researchers have first challenged the conceptualization of a perceptions-expectations gap and have concluded that the performance-based measures are adequate to capture consumers' perception of service quality. Some researchers have argued that the five dimensions of the SERVQUAL scale only focus on the process of service delivery and have extended the SERVQUAL scale into six dimensions by including the service outcome dimension. Others have proposed that service quality is a multilevel construct and should be measured accordingly. From a sample of 467 undergraduate students data on service quality toward up-scale restaurants were collected. Using the structural equation approach, two measurement models of service quality were compared, the extended SERVQUAL model and the restructured multilevel SERVQUAL model. Analysis suggested that the latter model fits the data better than the extended one.

  19. Superhydrophobic surface based on a coral-like hierarchical structure of ZnO.

    Directory of Open Access Journals (Sweden)

    Jun Wu

    Full Text Available BACKGROUND: Fabrication of superhydrophobic surfaces has attracted much interest in the past decade. The fabrication methods that have been studied are chemical vapour deposition, the sol-gel method, etching technique, electrochemical deposition, the layer-by-layer deposition, and so on. Simple and inexpensive methods for manufacturing environmentally stable superhydrophobic surfaces have also been proposed lately. However, work referring to the influence of special structures on the wettability, such as hierarchical ZnO nanostructures, is rare. METHODOLOGY: This study presents a simple and reproducible method to fabricate a superhydrophobic surface with micro-scale roughness based on zinc oxide (ZnO hierarchical structure, which is grown by the hydrothermal method with an alkaline aqueous solution. Coral-like structures of ZnO were fabricated on a glass substrate with a micro-scale roughness, while the antennas of the coral formed the nano-scale roughness. The fresh ZnO films exhibited excellent superhydrophilicity (the apparent contact angle for water droplet was about 0°, while the ability to be wet could be changed to superhydrophobicity after spin-coating Teflon (the apparent contact angle greater than 168°. The procedure reported here can be applied to substrates consisting of other materials and having various shapes. RESULTS: The new process is convenient and environmentally friendly compared to conventional methods. Furthermore, the hierarchical structure generates the extraordinary solid/gas/liquid three-phase contact interface, which is the essential characteristic for a superhydrophobic surface.

  20. Hierarchical structure of the countries based on electricity consumption and economic growth

    Science.gov (United States)

    Kantar, Ersin; Aslan, Alper; Deviren, Bayram; Keskin, Mustafa

    2016-07-01

    We investigate the hierarchical structures of countries based on electricity consumption and economic growth by using the real amounts of their consumption over a certain time period. We use electricity consumption data to detect the topological properties of 64 countries from 1971 to 2008. These countries are divided into three clusters: low income group, middle income group and high income group countries. Firstly, a relationship between electricity consumption and economic growth is investigated by using the concept of hierarchical structure methods (minimal spanning tree (MST) and hierarchical tree (HT)). Secondly, we perform bootstrap techniques to investigate a value of the statistical reliability to the links of the MST. Finally, we use a clustering linkage procedure in order to observe the cluster structure more clearly. The results of the structural topologies of these trees are as follows: (i) we identified different clusters of countries according to their geographical location and economic growth, (ii) we found a strong relation between energy consumption and economic growth for all the income groups considered in this study and (iii) the results are in good agreement with the causal relationship between electricity consumption and economic growth.

  1. Hierarchically structured composites for ultrafast liquid sensing and smart leak-plugging.

    Science.gov (United States)

    Wu, Xiaodong; Han, Yangyang; Zhang, Xinxing; Lu, Canhui

    2017-06-21

    Conductive polymer composites (CPCs) have been intensively exploited as remarkable liquid sensing materials based on variations in their conductivity under liquid stimuli. However, most advances in liquid sensing CPCs are limited to bulk materials. Due to the slow permeation of liquids into the compact CPCs, sluggish responses are inevitable for most existing CPC-based liquid sensing materials. Here, we developed a new class of liquid sensing materials via a hierarchical structure design. Specifically, a thin CPC layer with a segregated conductive network was coated on porous polyurethane (PU) skeletons by layer-by-layer assembly, forming an elaborately designed hierarchical structure in the prepared CPC@PU composites. With this hierarchical structure, the CPC@PU composites exhibited ultrafast responses (0.05-0.15 s) to solvent stimuli, which are ∼3 orders of magnitude faster than the state-of-the-art composites. After liquid sensing, quick regeneration (within 10 s) could be achieved under hot-air. Accordingly, organic liquid and gas sensors and liquid-sensing electronic skins were fabricated. Furthermore, we prepared smart and fast leak-plugging materials using the CPC@PU composites based on the swelling-induced blocking of micropores in the materials. This structural strategy proposed here opens up exciting avenues towards manufacturing real-time liquid sensing and plugging materials, revealing potential applications in oilfield exploitation, solvent storage/transportation, environmental monitoring, etc.

  2. Hierarchically structured carbon nanotubes for energy conversion and storage

    Science.gov (United States)

    Du, Feng

    As the world population continues to increase, large amounts of energy are consumed. Reality pushes us to find new energy or use our current energy more efficiently. Researches on energy conversion and storage have become increasingly important and essential. This grand challenge research has led to a recent focus on nanostructured materials. Carbon nanomaterials such as carbon nanotubes (CNTs) play a critical role in all of these nanotechnology challenges. CNTs have a very large surface area, a high electrochemical accessibility, high electronic conductivity and strong mechanical properties. This combination of properties makes them promising materials for energy device applications, such as FETs, supercapacitors, fuel cells, and lithium batteries. This study focuses on exploring the possibility of using vertically aligned carbon nanotubes (VA-CNTs) as the electrode materials in these energy applications. For the application of electrode materials, electrical conductive, vertically aligned CNTs with controllable length and diameter were synthesized. Several CVD methods for VA-CNT growth have been explored, although the iron / aluminum pre-coated catalyst CVD system was the main focus. A systematic study of several factors, including growth time, temperature, gas ratio, catalyst coating was conducted. The mechanism of VA-CNTs was discussed and a model for VA-CNT length / time was proposed to explain the CNT growth rate. Furthermore, the preferential growth of semiconducting (up to 96 atom% carbon) VA-SWNTs by using a plasma enhanced CVD process combined with fast heating was also explored, and these semiconducting materials have been directly used for making FETs using simple dispersion in organic solvent, without any separation and purification. Also, by inserting electron-accepting nitrogen atoms into the conjugated VA-CNT structure during the growth process, we synthesized vertically aligned nitrogen containing carbon nanotubes (VA-NCNTs). After purification of

  3. CTAB-Assisted Hydrothermal Synthesis of WO3 Hierarchical Porous Structures and Investigation of Their Sensing Properties

    Directory of Open Access Journals (Sweden)

    Dan Meng

    2015-01-01

    Full Text Available WO3 hierarchical porous structures were successfully synthesized via cetyltrimethylammonium bromide- (CTAB- assisted hydrothermal method. The structure and morphology were investigated using scanning electron microscope, X-ray diffractometer, transmission electron microscopy, X-ray photoelectron spectra, Brunauer-Emmett-Teller nitrogen adsorption-desorption, and thermogravimetry and differential thermal analysis. The result demonstrated that WO3 hierarchical porous structures with an orthorhombic structure were constructed by a number of nanoparticles about 50–100 nm in diameters. The H2 gas sensing measurements showed that well-defined WO3 hierarchical porous structures with a large specific surface area exhibited the higher sensitivity compared with products without CTAB at all operating temperatures. Moreover, the reversible and fast response to H2 gas and good selectivity were obtained. The results indicated that the WO3 hierarchical porous structures are promising materials for gas sensors.

  4. Hierarchically structured photonic crystals for integrated chemical separation and colorimetric detection.

    Science.gov (United States)

    Fu, Qianqian; Zhu, Biting; Ge, Jianping

    2017-02-16

    A SiO2 colloidal photonic crystal film with a hierarchical porous structure is fabricated to demonstrate an integrated separation and colorimetric detection of chemical species for the first time. This new photonic crystal based thin layer chromatography process requires no dyeing, developing and UV irradiation compared to the traditional TLC. The assembling of mesoporous SiO2 particles via a supersaturation-induced-precipitation process forms uniform and hierarchical photonic crystals with micron-scale cracks and mesopores, which accelerate the diffusion of developers and intensify the adsorption/desorption between the analytes and silica for efficient separation. Meanwhile, the chemical substances infiltrated to the voids of photonic crystals cause an increase of the refractive index and a large contrast of structural colors towards the unloaded part, so that the sample spots can be directly recognized with the naked eye before and after separation.

  5. Hierarchical statistical shape models of multiobject anatomical structures: application to brain MRI.

    Science.gov (United States)

    Cerrolaza, Juan J; Villanueva, Arantxa; Cabeza, Rafael

    2012-03-01

    The accurate segmentation of subcortical brain structures in magnetic resonance (MR) images is of crucial importance in the interdisciplinary field of medical imaging. Although statistical approaches such as active shape models (ASMs) have proven to be particularly useful in the modeling of multiobject shapes, they are inefficient when facing challenging problems. Based on the wavelet transform, the fully generic multiresolution framework presented in this paper allows us to decompose the interobject relationships into different levels of detail. The aim of this hierarchical decomposition is twofold: to efficiently characterize the relationships between objects and their particular localities. Experiments performed on an eight-object structure defined in axial cross sectional MR brain images show that the new hierarchical segmentation significantly improves the accuracy of the segmentation, and while it exhibits a remarkable robustness with respect to the size of the training set.

  6. Controlling Torque Distribution for Parallel Hybrid Vehicle Based on Hierarchical Structure Fuzzy Logic

    Institute of Scientific and Technical Information of China (English)

    HuangMiao-hua; JinGuo-dong

    2003-01-01

    The Hierarchical Structure Fuzzy Logic Control(HSFLC) strategies of torque distribute for Parallel Hybrid Electric Vehicle (PHEV) in the mocle of operation of the vehicle i. e. , acceleration, cruise, deceleration etc. have been studied. Using secondly developed the hybrid vehicle simulation tool ADVISOR, the dynamic model of PHEV has been set up by MATLAB/SIMULINK. The engine, motor as well as the battery characteristics have been studied. Simulation results show that the proposed hierarchical structured fuzzy logic control strategy is effective over the entire operating range of the vehicle in terms of fuel economy. Based on the analyses of the simulation results and driver's experiences, a fuzzy controller is designed and developed to control the torque distribution. The controller is evaluated via hardware-in-the-loop simulator (HILS). The results show that controller verify its value.

  7. UV-assisted capillary force lithography for engineering biomimetic multiscale hierarchical structures: From lotus leaf to gecko foot hairs

    KAUST Repository

    Jeong, Hoon Eui

    2009-01-01

    This feature article provides an overview of the recently developed two-step UV-assisted capillary force lithography and its application to fabricating well-defined micro/nanoscale hierarchical structures. This method utilizes an oxygen inhibition effect in the course of UV irradiation curing and a two-step moulding process, to form multiscale hierarchical or suspended nanobridge structures in a rapid and reproducible manner. After a brief description of the fabrication principles, several examples of the two-step UV-assisted moulding technique are presented. In addition, emerging applications of the multiscale hierarchical structures are briefly described. © The Royal Society of Chemistry 2009.

  8. The Relationship between Self-Leadership and Personality: A Comparison of Hierarchical Factor Structures

    OpenAIRE

    Jeffery D. Houghton

    2000-01-01

    This study examined the relationship between self-leadership and personality through an analysis and comparison of hierarchical factor structures. More specifically, this study examined the relationships between the self-leadership dimensions of behavior-focused strategies, natural reward strategies, and constructive thought strategies, and the personality dimensions of extraversion, emotional stability, and conscientiousness. The results of the study provide evidence that the self-leadershi...

  9. structSSI: Simultaneous and Selective Inference for Grouped or Hierarchically Structured Data

    Directory of Open Access Journals (Sweden)

    Kris Sankaran

    2014-09-01

    We briefly describe the group Benjamini-Hochberg and hierarchical false discovery rate procedures and then illustrate them using two examples, one a measure of ecological microbial abundances and the other a global temperature time series. For both procedures, we detail the steps associated with the analysis of these particular data sets, including establishing the dependence structures, performing the test, and interpreting the results. These steps are encapsulated by R functions, and we explain their applicability to general data sets.

  10. HIERARCHICAL STRUCTURE OF MAGNETOHYDRODYNAMIC TURBULENCE IN POSITION-POSITION-VELOCITY SPACE

    Energy Technology Data Exchange (ETDEWEB)

    Burkhart, Blakesley; Lazarian, A. [Astronomy Department, University of Wisconsin, Madison, 475 N. Charter St., WI 53711 (United States); Goodman, Alyssa [Harvard-Smithsonian Center for Astrophysics, 60 Garden Street, MS-78, Cambridge, MA 02138 (United States); Rosolowsky, Erik [University of British Columbia, Okanagan Campus, 3333 University Way, Kelowna BC V1V 1V7 (Canada)

    2013-06-20

    Magnetohydrodynamic turbulence is able to create hierarchical structures in the interstellar medium (ISM) that are correlated on a wide range of scales via the energy cascade. We use hierarchical tree diagrams known as dendrograms to characterize structures in synthetic position-position-velocity (PPV) emission cubes of isothermal magnetohydrodynamic turbulence. We show that the structures and degree of hierarchy observed in PPV space are related to the presence of self-gravity and the global sonic and Alfvenic Mach numbers. Simulations with higher Alfvenic Mach number, self-gravity and supersonic flows display enhanced hierarchical structure. We observe a strong dependency on the sonic and Alfvenic Mach numbers and self-gravity when we apply the statistical moments (i.e., mean, variance, skewness, kurtosis) to the leaf and node distribution of the dendrogram. Simulations with self-gravity, larger magnetic field and higher sonic Mach number have dendrogram distributions with higher statistical moments. Application of the dendrogram to three-dimensional density cubes, also known as position-position-position (PPP) cubes, reveals that the dominant emission contours in PPP and PPV are related for supersonic gas but not for subsonic. We also explore the effects of smoothing, thermal broadening, and velocity resolution on the dendrograms in order to make our study more applicable to observational data. These results all point to hierarchical tree diagrams as being a promising additional tool for studying ISM turbulence and star forming regions for obtaining information on the degree of self-gravity, the Mach numbers and the complicated relationship between PPV and PPP data.

  11. A Hierarchical FEM approach for Simulation of Geometrical and Material induced Instability of Composite Structures

    DEFF Research Database (Denmark)

    Hansen, Anders L.; Lund, Erik; Pinho, Silvestre T.

    2009-01-01

    In this paper a hierarchical FE approach is utilized to simulate delamination in a composite plate loaded in uni-axial compression. Progressive delamination is modelled by use of cohesive interface elements that are automatically embedded. The non-linear problem is solved quasi-statically in which...... the interaction between material degradation and structural instability is solved iteratively. The effect of fibre bridging is studied numerically and in-plane failure is predicted using physically based failure criteria....

  12. On the structure of Fatou domains

    Institute of Scientific and Technical Information of China (English)

    CUI GuiZhen; PENG Wen Juan

    2008-01-01

    Let U be a multiply-connected fixed attracting Fatou domain of a rational map f. We prove that there exist a rational map g and a completely invariant Fatou domain Ⅴ of g such that (f, U)and (g, V) are holomorphically conjugate, and each non-trivial Julia component of g is a quasi-circle which bounds an eventually superattracting Fatou domain of g containing at most one postcritical point of g. Moreover, g is unique up to a holomorphic conjugation.

  13. On the structure of Fatou domains

    Institute of Scientific and Technical Information of China (English)

    2008-01-01

    Let U be a multiply-connected fixed attracting Fatou domain of a rational map f.We prove that there exist a rational map g and a completely invariant Fatou domain V of g such that(f,U) and(g,V) are holomorphically conjugate,and each non-trivial Julia component of g is a quasi-circle which bounds an eventually superattracting Fatou domain of g containing at most one postcritical point of g.Moreover,g is unique up to a holomorphic conjugation.

  14. Thermodynamic analysis on an anisotropically superhydrophobic surface with a hierarchical structure

    Energy Technology Data Exchange (ETDEWEB)

    Zhao, Jieliang [Division of Intelligent and Biomechanical Systems, State Key Laboratory of Tribology, Tsinghua University, Room 3407, Building 9003, 100084 Beijing (China); Su, Zhengliang [Division of Intelligent and Biomechanical Systems, State Key Laboratory of Tribology, Tsinghua University, Room 3407, Building 9003, 100084 Beijing (China); Department of Automotive Engineering, Tsinghua University, Beijing 100084 (China); Yan, Shaoze, E-mail: yansz@mail.tsinghua.edu.cn [Division of Intelligent and Biomechanical Systems, State Key Laboratory of Tribology, Tsinghua University, Room 3407, Building 9003, 100084 Beijing (China)

    2015-12-01

    Graphical abstract: - Highlights: • We model the superhydrophobic surface with anisotropic and hierarchical structure. • Anisotropic wetting only shows in noncomposite state (not in composite state). • Transition from noncomposite to composite state on dual-scale structure is hard. • Droplets tend to roll in the particular direction. • Droplets tend to stably remain in one preferred thermodynamic state. - Abstract: Superhydrophobic surfaces, which refer to the surfaces with contact angle higher than 150° and hysteresis less than 10°, have been reported in various studies. However, studies on the superhydrophobicity of anisotropic, hierarchical surfaces are limited and the corresponding thermodynamic mechanisms could not be explained thoroughly. Here we propose a simplified surface model of anisotropic patterned surface with dual scale roughness. Based on the thermodynamic method, we calculate the equilibrium contact angle (ECA) and the contact angle hysteresis (CAH) on the given surface. We show here that the hierarchical structure has much better anisotropic wetting properties than the single-scale one, and the results shed light on the potential application in controllable micro-/nano-fluidic systems. Our studies can be potentially applied for the fabrication of anisotropically superhydrophobic surfaces.

  15. GENETIC CONSEQUENCES OF SEED DISPERSAL IN THREE SYMPATRIC FOREST HERBS. I. HIERARCHICAL POPULATION-GENETIC STRUCTURE.

    Science.gov (United States)

    Williams, Charles F; Guries, Raymond P

    1994-06-01

    To examine the effects of seed dispersal on spatial genetic structure, we compare three sympatric species of forest herbs in the family Apiaceae whose fruits differ widely in morphological adaptations for animal-attached dispersal. Cryptotaenia canadensis has smooth fruits that are gravity dispersed, whereas Osmorhiza claytonii and Sanicula odorata fruits have appendages that facilitate their attachment to animals. The relative seed-dispersal ability among species, measured as their ability to remain attached to mammal fur, is ranked Sanicula > Osmorhiza > Cryptotaenia. We use a nested hierarchical sampling design to analyze genetic structure at spatial scales ranging from a few meters to hundreds of kilometers. Genetic differentiation among population subdivisions, estimated by average genetic distance and hierarchical F-statistics, has an inverse relationship with dispersal ability such that Cryptotaenia > Osmorhiza > Sanicula. In each species, genetic differentiation increases with distance among population subdivisions. Stochastic variation in gene flow, arising from seed dispersal by attachment to animals, may partly explain the weak relationship between pairwise spatial and genetic distance among populations and heterogeneity in estimates of single locus F-statistics. A hierarchical island model of gene flow is invoked to describe the effects of seed dispersal on population genetic structure. Seed dispersal is the predominant factor affecting variation in gene flow among these ecologically similar, taxonomically related species. © 1994 The Society for the Study of Evolution.

  16. Inferring a district-based hierarchical structure of social contacts from census data.

    Directory of Open Access Journals (Sweden)

    Z Yu

    Full Text Available Researchers have recently paid attention to social contact patterns among individuals due to their useful applications in such areas as epidemic evaluation and control, public health decisions, chronic disease research and social network research. Although some studies have estimated social contact patterns from social networks and surveys, few have considered how to infer the hierarchical structure of social contacts directly from census data. In this paper, we focus on inferring an individual's social contact patterns from detailed census data, and generate various types of social contact patterns such as hierarchical-district-structure-based, cross-district and age-district-based patterns. We evaluate newly generated contact patterns derived from detailed 2011 Hong Kong census data by incorporating them into a model and simulation of the 2009 Hong Kong H1N1 epidemic. We then compare the newly generated social contact patterns with the mixing patterns that are often used in the literature, and draw the following conclusions. First, the generation of social contact patterns based on a hierarchical district structure allows for simulations at different district levels. Second, the newly generated social contact patterns reflect individuals social contacts. Third, the newly generated social contact patterns improve the accuracy of the SEIR-based epidemic model.

  17. Domains of psychopathy: evaluating the structure of a lexical model of psychopathic personality disorder.

    Science.gov (United States)

    Hoff, Helge Andreas; Rypdal, Knut; Hart, Stephen D; Cooke, David J; Mykletun, Arnstein

    2015-04-01

    This study examines the structure of the Comprehensive Assessment of Psychopathic Personality (CAPP) from a card sort perspective. The CAPP is a lexically based construct map of psychopathy comprising 33 symptoms organized by its developers into 6 broad functional domains of personality (i.e., Attachment, Behavioral, Cognitive; Dominance; Emotional, Self). Groups of mental health workers and students were asked to sort the CAPP symptoms into the model's 6 proposed domains. Overall, both mental health workers and students were able to categorize the symptoms speedily and intuitively according to model. This suggests that the CAPP model's hierarchical structure is plausible, and that the lexical nature of the model is successful in facilitating people's ability to understand features of psychopathy in a way that requires limited cognitive effort. Together, these findings support the validity of the CAPP model as a lexically based concept map of psychopathy. Yet, some exceptions to the overall pattern of agreement with model were identified.

  18. Estimating and modelling bias of the hierarchical partitioning public-domain software: implications in environmental management and conservation.

    Directory of Open Access Journals (Sweden)

    Pedro P Olea

    Full Text Available BACKGROUND: Hierarchical partitioning (HP is an analytical method of multiple regression that identifies the most likely causal factors while alleviating multicollinearity problems. Its use is increasing in ecology and conservation by its usefulness for complementing multiple regression analysis. A public-domain software "hier.part package" has been developed for running HP in R software. Its authors highlight a "minor rounding error" for hierarchies constructed from >9 variables, however potential bias by using this module has not yet been examined. Knowing this bias is pivotal because, for example, the ranking obtained in HP is being used as a criterion for establishing priorities of conservation. METHODOLOGY/PRINCIPAL FINDINGS: Using numerical simulations and two real examples, we assessed the robustness of this HP module in relation to the order the variables have in the analysis. Results indicated a considerable effect of the variable order on the amount of independent variance explained by predictors for models with >9 explanatory variables. For these models the nominal ranking of importance of the predictors changed with variable order, i.e. predictors declared important by its contribution in explaining the response variable frequently changed to be either most or less important with other variable orders. The probability of changing position of a variable was best explained by the difference in independent explanatory power between that variable and the previous one in the nominal ranking of importance. The lesser is this difference, the more likely is the change of position. CONCLUSIONS/SIGNIFICANCE: HP should be applied with caution when more than 9 explanatory variables are used to know ranking of covariate importance. The explained variance is not a useful parameter to use in models with more than 9 independent variables. The inconsistency in the results obtained by HP should be considered in future studies as well as in those

  19. On Hierarchical Extensions of Large-Scale 4-regular Grid Network Structures

    DEFF Research Database (Denmark)

    Pedersen, Jens Myrup; Patel, A.; Knudsen, Thomas Phillip

    It is studied how the introduction of ordered hierarchies in 4-regular grid network structures decreses distances remarkably, while at the same time allowing for simple topological routing schemes. Both meshes and tori are considered; in both cases non-hierarchical structures have power law......, and it is shown that while they allow for more flexibility in design and construction of structures supporting topological routing, their performances are comparable to the performance of the perfect square mesh. Finally suggestions for further research within the field are given....

  20. On Hierarchical Extensions of Large-Scale 4-regular Grid Network Structures

    DEFF Research Database (Denmark)

    Pedersen, Jens Myrup; Patel, A.; Knudsen, Thomas Phillip

    2004-01-01

    It is studied how the introduction of ordered hierarchies in 4-regular grid network structures decreases distances remarkably, while at the same time allowing for simple topological routing schemes. Both meshes and tori are considered; in both cases non-hierarchical structures have power law......, and it is shown that while they allow for more flexibility in design and construction of structures supporting topological routing, their performances are comparable to the performance of the perfect square mesh. Finally suggestions for further research within the field are given....

  1. A hybrid method for identification of structural domains

    Science.gov (United States)

    Hua, Yongpan; Zhu, Min; Wang, Yuelong; Xie, Zhaoyang; Li, Menglong

    2014-12-01

    Structural domains in proteins are the basic units to form various proteins. In the protein's evolution and functioning, domains play important roles. But the definition of domain is not yet precisely given, and the update cycle of structural domain databases is long. The automatic algorithms identify domains slowly, while protein entities with great structural complexity are on the rise. Here, we present a method which recognizes the compact and modular segments of polypeptide chains to identify structural domains, and contrast some data sets to illuminate their effect. The method combines support vector machine (SVM) with K-means algorithm. It is faster and more stable than most current algorithms and performs better. It also indicates that when proteins are presented as some Alpha-carbon atoms in 3D space, it is feasible to identify structural domains by the spatially structural properties. We have developed a web-server, which would be helpful in identification of structural domains (http://vis.sculab.org/~huayongpan/cgi-bin/domainAssignment.cgi).

  2. Extensions of PDZ domains as important structural and functional elements

    OpenAIRE

    Wang, Conan K.; Pan, Lifeng; Chen, Jia; Zhang, Mingjie

    2010-01-01

    ‘Divide and conquer’ has been the guiding strategy for the study of protein structure and function. Proteins are divided into domains with each domain having a canonical structural definition depending on its type. In this review, we push forward with the interesting observation that many domains have regions outside of their canonical definition that affect their structure and function; we call these regions ‘extensions’. We focus on the highly abundant PDZ (PSD-95, DLG1 and ZO-1) domain. Us...

  3. Investigation of dielectric relaxation in systems with hierarchical organization: From time to frequency domain and back again

    Energy Technology Data Exchange (ETDEWEB)

    Yokoi, Koki [Department of Physics, University of Wisconsin-Milwaukee, Milwaukee, WI (United States); Raicu, Valerică, E-mail: vraicu@uwm.edu [Department of Physics, University of Wisconsin-Milwaukee, Milwaukee, WI (United States); Department of Biological Sciences, University of Wisconsin-Milwaukee, Milwaukee, WI (United States)

    2017-06-28

    Relaxation in fractal structures was investigated theoretically starting from a simple model of a Cantorian tree and kinetic equations linking the change in the number of particles (e.g., electrical charges) populating each branch of the tree and their transfer to other branches or to the ground state. We numerically solved the system of differential equations obtained and determined the so-called cumulative distribution function of particles, which, in dielectric or mechanical relaxation parlance, is the same as the relaxation function of the system. As a physical application, we studied the relationship between the dielectric relaxation in time-domain and the dielectric dispersion in the frequency-domain. Upon choosing appropriate rate constants, our model described accurately well-known non-exponential and non-Debye time- and frequency-domain functions, such as stretched exponentials, Havrilliak–Negami, and frequency power law. Our approach opens the door to applying kinetic models to describe a wide array of relaxation processes, which traditionally have posed great challenges to theoretical modeling based on first principles. - Highlights: • Relaxation was investigated for a system of particles flowing through a Cantorian tree. • A set of kinetic equations was formulated and used to compute the relaxation function of the system. • The dispersion function of the system was computed from the relaxation function. • An analytical method was used to recover the original relaxation function from the dispersion function. • This formalism was used to study dielectric relaxation and dispersion in fractal structures.

  4. About Hierarchical XML Structures, Replacement of Relational Data Structures in Construction and Implementation of ERP Systems

    Directory of Open Access Journals (Sweden)

    2007-01-01

    Full Text Available The projects essential objective is to develop a new ERP system, of homogeneous nature, based on XML structures, as a possible replacement for classic ERP systems. The criteria that guide the objective definition are modularity, portability and Web connectivity. This objective is connected to a series of secondary objectives, considering that the technological approach will be filtered through the economic, social and legislative environment for a validation-by-context study. Statistics and cybernetics are to be used for simulation purposes. The homogeneous approach is meant to provide strong modularity and portability, in relation with the n-tier principles, but the main advantage of the model is its opening to the semantic Web, based on a Small enterprise ontology defined with XML-driven languages. Shockwave solutions will be used for implementing client-oriented hypermedia elements and an XML Gate will be de-fined between black box modules, for a clear separation with obvious advantages. Security and the XMLTP project will be an important issue for XML transfers due to the conflict between the open architecture of the Web, the readability of XML data and the privacy elements which have to be preserved within a business environment. The projects finality is oriented on small business but the semantic Web perspective and the surprising new conflict between hierarchical/network data structures and relational ones will certainly widen its scope. The proposed model is meant to fulfill the IT compatibility requirements of the European environment, defined as a knowledge society. The paper is a brief of the contributions of the team re-search at the project type A applied to CNCSIS "Research on the Role of XML in Building Extensible and Homogeneous ERP Systems".

  5. A neural signature of hierarchical reinforcement learning.

    Science.gov (United States)

    Ribas-Fernandes, José J F; Solway, Alec; Diuk, Carlos; McGuire, Joseph T; Barto, Andrew G; Niv, Yael; Botvinick, Matthew M

    2011-07-28

    Human behavior displays hierarchical structure: simple actions cohere into subtask sequences, which work together to accomplish overall task goals. Although the neural substrates of such hierarchy have been the target of increasing research, they remain poorly understood. We propose that the computations supporting hierarchical behavior may relate to those in hierarchical reinforcement learning (HRL), a machine-learning framework that extends reinforcement-learning mechanisms into hierarchical domains. To test this, we leveraged a distinctive prediction arising from HRL. In ordinary reinforcement learning, reward prediction errors are computed when there is an unanticipated change in the prospects for accomplishing overall task goals. HRL entails that prediction errors should also occur in relation to task subgoals. In three neuroimaging studies we observed neural responses consistent with such subgoal-related reward prediction errors, within structures previously implicated in reinforcement learning. The results reported support the relevance of HRL to the neural processes underlying hierarchical behavior.

  6. Synthesis and characterization of branched yttrium hydroxide fluoride microcrystals with hierarchical tubular structure

    Institute of Scientific and Technical Information of China (English)

    TIAN Li; JIANG Wentao; SUN Qiliang; LIU Jin

    2012-01-01

    Hexagonal yttrium hydroxide fluoride microcrystals were prepared by a two-step hydrothermal route using yttrium nitrate,sodium hydroxide and sodium fluoride as raw materials to react in propanetriol solvent.The samples were characterized by powder X-ray diffraction (XRD),energy dispersive spectrum (EDS),scanning electron microscopy (SEM),transmission electron microscopy (TEM),Fourier transform infrared spectroscopy (FT-IR),thermogravimetre and differential-thermogravimetric analysis (TG-DTA),which revealed that Y(OH)2.14F0.86 microcrystals were multi-branched and that the branches of Y(OH)2.14F0.86 microcrystals were composed of hierarchical tubes.This novel multi-branched and intriguing hierarchical tubular structure of yttrium hydroxide fluoride maybe has a potential application in photoelectric crystals.The formation of branched Y(OH)2.14F0.86 microcrystals with hierarchical tubular structure were due to the substitution reaction and Oswald ripening.

  7. Identifying overlapping and hierarchical thematic structures in networks of scholarly papers: a comparison of three approaches.

    Science.gov (United States)

    Havemann, Frank; Gläser, Jochen; Heinz, Michael; Struck, Alexander

    2012-01-01

    The aim of this paper is to introduce and assess three algorithms for the identification of overlapping thematic structures in networks of papers. We implemented three recently proposed approaches to the identification of overlapping and hierarchical substructures in graphs and applied the corresponding algorithms to a network of 492 information-science papers coupled via their cited sources. The thematic substructures obtained and overlaps produced by the three hierarchical cluster algorithms were compared to a content-based categorisation, which we based on the interpretation of titles, abstracts, and keywords. We defined sets of papers dealing with three topics located on different levels of aggregation: h-index, webometrics, and bibliometrics. We identified these topics with branches in the dendrograms produced by the three cluster algorithms and compared the overlapping topics they detected with one another and with the three predefined paper sets. We discuss the advantages and drawbacks of applying the three approaches to paper networks in research fields.

  8. Identifying overlapping and hierarchical thematic structures in networks of scholarly papers: a comparison of three approaches.

    Directory of Open Access Journals (Sweden)

    Frank Havemann

    Full Text Available The aim of this paper is to introduce and assess three algorithms for the identification of overlapping thematic structures in networks of papers. We implemented three recently proposed approaches to the identification of overlapping and hierarchical substructures in graphs and applied the corresponding algorithms to a network of 492 information-science papers coupled via their cited sources. The thematic substructures obtained and overlaps produced by the three hierarchical cluster algorithms were compared to a content-based categorisation, which we based on the interpretation of titles, abstracts, and keywords. We defined sets of papers dealing with three topics located on different levels of aggregation: h-index, webometrics, and bibliometrics. We identified these topics with branches in the dendrograms produced by the three cluster algorithms and compared the overlapping topics they detected with one another and with the three predefined paper sets. We discuss the advantages and drawbacks of applying the three approaches to paper networks in research fields.

  9. Thermodynamic analysis on an anisotropically superhydrophobic surface with a hierarchical structure

    Science.gov (United States)

    Zhao, Jieliang; Su, Zhengliang; Yan, Shaoze

    2015-12-01

    Superhydrophobic surfaces, which refer to the surfaces with contact angle higher than 150° and hysteresis less than 10°, have been reported in various studies. However, studies on the superhydrophobicity of anisotropic, hierarchical surfaces are limited and the corresponding thermodynamic mechanisms could not be explained thoroughly. Here we propose a simplified surface model of anisotropic patterned surface with dual scale roughness. Based on the thermodynamic method, we calculate the equilibrium contact angle (ECA) and the contact angle hysteresis (CAH) on the given surface. We show here that the hierarchical structure has much better anisotropic wetting properties than the single-scale one, and the results shed light on the potential application in controllable micro-/nano-fluidic systems. Our studies can be potentially applied for the fabrication of anisotropically superhydrophobic surfaces.

  10. Chiral acidic amino acids induce chiral hierarchical structure in calcium carbonate

    Science.gov (United States)

    Jiang, Wenge; Pacella, Michael S.; Athanasiadou, Dimitra; Nelea, Valentin; Vali, Hojatollah; Hazen, Robert M.; Gray, Jeffrey J.; McKee, Marc D.

    2017-04-01

    Chirality is ubiquitous in biology, including in biomineralization, where it is found in many hardened structures of invertebrate marine and terrestrial organisms (for example, spiralling gastropod shells). Here we show that chiral, hierarchically organized architectures for calcium carbonate (vaterite) can be controlled simply by adding chiral acidic amino acids (Asp and Glu). Chiral, vaterite toroidal suprastructure having a `right-handed' (counterclockwise) spiralling morphology is induced by L-enantiomers of Asp and Glu, whereas `left-handed' (clockwise) morphology is induced by D-enantiomers, and sequentially switching between amino-acid enantiomers causes a switch in chirality. Nanoparticle tilting after binding of chiral amino acids is proposed as a chiral growth mechanism, where a `mother' subunit nanoparticle spawns a slightly tilted, consequential `daughter' nanoparticle, which by amplification over various length scales creates oriented mineral platelets and chiral vaterite suprastructures. These findings suggest a molecular mechanism for how biomineralization-related enantiomers might exert hierarchical control to form extended chiral suprastructures.

  11. Hierarchically Structured Graphene Coupled Microporous Organic Polymers for Superior CO2 Capture.

    Science.gov (United States)

    Liu, Fa-Qian; Wang, Li-Li; Li, Guo-Hua; Li, Wei; Li, Chao-Qin

    2017-10-04

    Hierarchically porous materials containing interconnected macro-/meso-/micropores are promising candidates for energy storage, catalysis, and gas separation. Here, we present an effective approach for synthesizing three-dimensional (3D) sulfonated graphene coupled microporous organic polymers (SG-MOPs). The resulting SG-MOPs possess uniform macropores with an average size of ca. 350 nm, abundant mesopores, and micropores with an average size of ca. 0.6 nm. The SG-supported adsorbents exhibit a high nitrogen content (more than 38.1 wt %), high adsorption capacity (up to 3.37 mmol CO2 g(-1)), high CO2/N2 selectivity from 42 to 51, moderate heat of adsorption, as well as good stability because of the hierarchical porous structure and excellent thermal conductivity of the SG scaffold. Thus, these nitrogen-enriched adsorbents allow the overall CO2 capture process to be promising and sustainable.

  12. Structure of the human Nac1 POZ domain.

    Science.gov (United States)

    Stead, Mark A; Carr, Stephen B; Wright, Stephanie C

    2009-05-01

    Nac1 is a POZ-domain transcription factor that is involved in the self-renewal of embryonic stem cells. It is overexpressed in ovarian serous carcinoma and targeting the interactions of its POZ domain is a potential therapeutic strategy. Nac1 lacks a zinc-finger DNA-binding domain and thereby differs from most other POZ-domain transcription factors. Here, the crystal structure of the Nac1 POZ domain at 2.1 A resolution is reported. The Nac1 POZ domain crystallized as a dimer in which the interaction interfaces between subunits resemble those found in the POZ-zinc finger transcription factors. The organization of the Nac1 POZ-domain core resembles reported POZ-domain structures, whereas the C-terminus differs markedly. The C-terminal alpha-helix of the Nac1 POZ domain is shorter than that observed in most other POZ-domain transcription factors; variation in the organization of this region may be a general feature of POZ-domain structures.

  13. Facile method for preparing superoleophobic surfaces with hierarchical microcubic/nanowire structures

    Science.gov (United States)

    Kwak, Wonshik; Hwang, Woonbong

    2016-02-01

    To facilitate the fabrication of superoleophobic surfaces having hierarchical microcubic/nanowire structures (HMNS), even for low surface tension liquids including octane (surface tension = 21.1 mN m-1), and to understand the influences of surface structures on the oleophobicity, we developed a convenient method to achieve superoleophobic surfaces on aluminum substrates using chemical acid etching, anodization and fluorination treatment. The liquid repellency of the structured surface was validated through observable experimental results the contact and sliding angle measurements. The etching condition required to ensure high surface roughness was established, and an optimal anodizing condition was determined, as a critical parameter in building the superoleophobicity. The microcubic structures formed by acid etching are essential for achieving the formation of the hierarchical structure, and therefore, the nanowire structures formed by anodization lead to an enhancement of the superoleophobicity for low surface tension liquids. Under optimized morphology by microcubic/nanowire structures with fluorination treatment, the contact angle over 150° and the sliding angle less than 10° are achieved even for octane.

  14. Some Lower Valence Vanadium Fluorides: Their Crystal Distortions, Domain Structures, Modulated Structures, Ferrimagnetism, and Composition Dependence.

    Science.gov (United States)

    Hong, Y. S.; And Others

    1980-01-01

    Describes some contemporary concepts unique to the structure of advanced solids, i.e., their crystal distortions, domain structures, modulated structures, ferrimagnetism, and composition dependence. (Author/CS)

  15. Is there a domain-general cognitive structuring system? Evidence from structural priming across music, math, action descriptions, and language.

    Science.gov (United States)

    Van de Cavey, Joris; Hartsuiker, Robert J

    2016-01-01

    Cognitive processing in many domains (e.g., sentence comprehension, music listening, and math solving) requires sequential information to be organized into an integrational structure. There appears to be some overlap in integrational processing across domains, as shown by cross-domain interference effects when for example linguistic and musical stimuli are jointly presented (Koelsch, Gunter, Wittfoth, & Sammler, 2005; Slevc, Rosenberg, & Patel, 2009). These findings support theories of overlapping resources for integrational processing across domains (cfr. SSIRH Patel, 2003; SWM, Kljajevic, 2010). However, there are some limitations to the studies mentioned above, such as the frequent use of unnaturalistic integrational difficulties. In recent years, the idea has risen that evidence for domain-generality in structural processing might also be yielded though priming paradigms (cfr. Scheepers, 2003). The rationale behind this is that integrational processing across domains regularly requires the processing of dependencies across short or long distances in the sequence, involving respectively less or more syntactic working memory resources (cfr. SWM, Kljajevic, 2010), and such processing decisions might persist over time. However, whereas recent studies have shown suggestive priming of integrational structure between language and arithmetics (though often dependent on arithmetic performance, cfr. Scheepers et al., 2011; Scheepers & Sturt, 2014), it remains to be investigated to what extent we can also find evidence for priming in other domains, such as music and action (cfr. SWM, Kljajevic, 2010). Experiment 1a showed structural priming from the processing of musical sequences onto the position in the sentence structure (early or late) to which a relative clause was attached in subsequent sentence completion. Importantly, Experiment 1b showed that a similar structural manipulation based on non-hierarchically ordered color sequences did not yield any priming effect

  16. Spatial Object Aggregation Based on Data Structure,Local Triangulation and Hierarchical Analyzing Method

    Institute of Scientific and Technical Information of China (English)

    2002-01-01

    This paper focuses on the methods and process of spatial aggregation based on semantic and geometric characteristics of spatial objects and relations among the objects with the help of spatial data structure (Formal Data Structure),the Local Constrained Delaunay Triangulations and semantic hierarchy.The adjacent relation among connected objects and unconnected objects has been studied through constrained triangle as elementary processing unit in aggregation operation.The hierarchical semantic analytical matrix is given for analyzing the similarity between objects types and between objects.Several different cases of aggregation have been presented in this paper.

  17. Hierarchically structured carbonaceous foams generation and their use as electrochemical energy storage devices

    Energy Technology Data Exchange (ETDEWEB)

    Brun, Nicolas [Centre de Recherche Paul Pascal, Pessac (France); Institut des Sciences Moleculaires, Talence (France); Prabaharan, Savari R.S.; Morcrette, Mathieu [Laboratoire de Reactivite et de Chimie des Solides, Amiens (France); Pecastaing, Gilles [Laboratoire de Chimie des Polymeres Organiques, Pessac (France); Birot, Marc; Deleuze, Herve [Institut des Sciences Moleculaires, Talence (France); Backov, Renal [Centre de Recherche Paul Pascal, Pessac (France)

    2010-07-01

    Hierarchically structured carbonaceous foams with a high control over macro-meso-microporous structures have been synthesized, using silica as inorganic exotemplate and phenolic resin as carbon precursor. These monolithic foams have been thoroughly characterized over all length scales. The applications of this new series of macrocellular carbonaceous monoliths as negative electrodes for Lithium-ion batteries devices (stable capacity of 200 mAh.g{sup -1}, during 50 cycles) and electrochemical capacitors (specific capacitance of 30 F.g{sup -1} at a scan rate of 10 mV.s{sup -1}) have been checked and will be discussed. (orig.)

  18. Fabrication of semi-transparent superoleophobic thin film from fabrics and nanoparticle-based hierarchical structure

    Directory of Open Access Journals (Sweden)

    Nishizawa S.

    2013-08-01

    Full Text Available Superoleophobic thin films have many potential applications including fluid transfer, fluid power systems, stain resistant and antifouling materials, and microfluidics among others. Transparency is also desired with superhydrophobicity for their numerous applications; however transparency and oleophobicity are almost incompatible relationship with each other in the point of surface structure. Because oleophobicity required rougher structure at nano-micro scale than hydrophobicity, and these rough structure brings light scattering. So far, there is very few report of the compatible of transparency and superoleophobicity. In this report, we proposed the see-through type fabrics using the nanoparticle-based hierarchical structure thin film for improving both of oleophobicity and transparency. The vacant space between fibrils of fabrics has two important roles: the one is to through the light, another one is to introduce air layer to realize Cassie state of liquid droplet on thin film. To realize the low surface energy and nanoscale rough structure surface on fibrils, we used the spray method with perfluoroalkyl methacrylic copolymer (PMC, silica nano particles and volatile solvent. From the SEM image, the hierarchical structures of nanoparticle were formed uniformly on the fabrics. The transparency of thin film obtained was approximately 61% and the change of transparency between pre-coated fabrics and coated was 11%. From investigation of the surface wettability, the contact angles of oils (rapeseed oil and hexadecane and water droplet on the fabricated film were over 150 degree.

  19. Hierarchical assembly may be a way to make large information-rich structures

    CERN Document Server

    Whitelam, Stephen

    2015-01-01

    Self-assembly in the laboratory can now yield `information-rich' nanostructures in which each component is of a distinct type and has a defined spatial position. Ensuring the thermodynamic stability of such structures requires inter-component interaction energies to increase logarithmically with structure size, in order to counter the entropy gained upon mixing component types in solution. However, self-assembly in the presence of strong interactions results in general in kinetic trapping, so suggesting a limit to the size of an (equilibrium) structure that can be self-assembled from distinguishable components. Here we study numerically a two-dimensional hierarchical assembly scheme already considered in experiment. We show that this scheme is immune to the kinetic traps associated with strong `native' interactions (interactions designed to stabilize the intended structure), and so, in principle, offers a way to make large information-rich structures. In this scheme the size of an assembled structure scales e...

  20. The type I error rate for in vivo Comet assay data when the hierarchical structure is disregarded

    DEFF Research Database (Denmark)

    Hansen, Merete Kjær; Kulahci, Murat

    The Comet assay is a sensitive technique for detection of DNA strand breaks. The experimental design of in vivo Comet assay studies are often hierarchically structured, which should be reWected in the statistical analysis. However, the hierarchical structure sometimes seems to be disregarded, and...... the exposition of the statistical methodology and to suitably account for the hierarchical structure of Comet assay data whenever present.......The Comet assay is a sensitive technique for detection of DNA strand breaks. The experimental design of in vivo Comet assay studies are often hierarchically structured, which should be reWected in the statistical analysis. However, the hierarchical structure sometimes seems to be disregarded......, and this imposes considerable impact on the type I error rate. This study aims to demonstrate the implications that result from disregarding the hierarchical structure. DiUerent combinations of the factor levels as they appear in a literature study give type I error rates up to 0.51 and for all combinations...

  1. Neural mechanisms underlying the computation of hierarchical tree structures in mathematics.

    Directory of Open Access Journals (Sweden)

    Tomoya Nakai

    Full Text Available Whether mathematical and linguistic processes share the same neural mechanisms has been a matter of controversy. By examining various sentence structures, we recently demonstrated that activations in the left inferior frontal gyrus (L. IFG and left supramarginal gyrus (L. SMG were modulated by the Degree of Merger (DoM, a measure for the complexity of tree structures. In the present study, we hypothesize that the DoM is also critical in mathematical calculations, and clarify whether the DoM in the hierarchical tree structures modulates activations in these regions. We tested an arithmetic task that involved linear and quadratic sequences with recursive computation. Using functional magnetic resonance imaging, we found significant activation in the L. IFG, L. SMG, bilateral intraparietal sulcus (IPS, and precuneus selectively among the tested conditions. We also confirmed that activations in the L. IFG and L. SMG were free from memory-related factors, and that activations in the bilateral IPS and precuneus were independent from other possible factors. Moreover, by fitting parametric models of eight factors, we found that the model of DoM in the hierarchical tree structures was the best to explain the modulation of activations in these five regions. Using dynamic causal modeling, we showed that the model with a modulatory effect for the connection from the L. IPS to the L. IFG, and with driving inputs into the L. IFG, was highly probable. The intrinsic, i.e., task-independent, connection from the L. IFG to the L. IPS, as well as that from the L. IPS to the R. IPS, would provide a feedforward signal, together with negative feedback connections. We indicate that mathematics and language share the network of the L. IFG and L. IPS/SMG for the computation of hierarchical tree structures, and that mathematics recruits the additional network of the L. IPS and R. IPS.

  2. Neural mechanisms underlying the computation of hierarchical tree structures in mathematics.

    Science.gov (United States)

    Nakai, Tomoya; Sakai, Kuniyoshi L

    2014-01-01

    Whether mathematical and linguistic processes share the same neural mechanisms has been a matter of controversy. By examining various sentence structures, we recently demonstrated that activations in the left inferior frontal gyrus (L. IFG) and left supramarginal gyrus (L. SMG) were modulated by the Degree of Merger (DoM), a measure for the complexity of tree structures. In the present study, we hypothesize that the DoM is also critical in mathematical calculations, and clarify whether the DoM in the hierarchical tree structures modulates activations in these regions. We tested an arithmetic task that involved linear and quadratic sequences with recursive computation. Using functional magnetic resonance imaging, we found significant activation in the L. IFG, L. SMG, bilateral intraparietal sulcus (IPS), and precuneus selectively among the tested conditions. We also confirmed that activations in the L. IFG and L. SMG were free from memory-related factors, and that activations in the bilateral IPS and precuneus were independent from other possible factors. Moreover, by fitting parametric models of eight factors, we found that the model of DoM in the hierarchical tree structures was the best to explain the modulation of activations in these five regions. Using dynamic causal modeling, we showed that the model with a modulatory effect for the connection from the L. IPS to the L. IFG, and with driving inputs into the L. IFG, was highly probable. The intrinsic, i.e., task-independent, connection from the L. IFG to the L. IPS, as well as that from the L. IPS to the R. IPS, would provide a feedforward signal, together with negative feedback connections. We indicate that mathematics and language share the network of the L. IFG and L. IPS/SMG for the computation of hierarchical tree structures, and that mathematics recruits the additional network of the L. IPS and R. IPS.

  3. Neural Mechanisms Underlying the Computation of Hierarchical Tree Structures in Mathematics

    Science.gov (United States)

    Nakai, Tomoya; Sakai, Kuniyoshi L.

    2014-01-01

    Whether mathematical and linguistic processes share the same neural mechanisms has been a matter of controversy. By examining various sentence structures, we recently demonstrated that activations in the left inferior frontal gyrus (L. IFG) and left supramarginal gyrus (L. SMG) were modulated by the Degree of Merger (DoM), a measure for the complexity of tree structures. In the present study, we hypothesize that the DoM is also critical in mathematical calculations, and clarify whether the DoM in the hierarchical tree structures modulates activations in these regions. We tested an arithmetic task that involved linear and quadratic sequences with recursive computation. Using functional magnetic resonance imaging, we found significant activation in the L. IFG, L. SMG, bilateral intraparietal sulcus (IPS), and precuneus selectively among the tested conditions. We also confirmed that activations in the L. IFG and L. SMG were free from memory-related factors, and that activations in the bilateral IPS and precuneus were independent from other possible factors. Moreover, by fitting parametric models of eight factors, we found that the model of DoM in the hierarchical tree structures was the best to explain the modulation of activations in these five regions. Using dynamic causal modeling, we showed that the model with a modulatory effect for the connection from the L. IPS to the L. IFG, and with driving inputs into the L. IFG, was highly probable. The intrinsic, i.e., task-independent, connection from the L. IFG to the L. IPS, as well as that from the L. IPS to the R. IPS, would provide a feedforward signal, together with negative feedback connections. We indicate that mathematics and language share the network of the L. IFG and L. IPS/SMG for the computation of hierarchical tree structures, and that mathematics recruits the additional network of the L. IPS and R. IPS. PMID:25379713

  4. Structure of a double-domain phosphagen kinase reveals an asymmetric arrangement of the tandem domains.

    Science.gov (United States)

    Wang, Zhiming; Qiao, Zhu; Ye, Sheng; Zhang, Rongguang

    2015-04-01

    Tandem duplications and fusions of single genes have led to magnificent expansions in the divergence of protein structures and functions over evolutionary timescales. One of the possible results is polydomain enzymes with interdomain cooperativities, few examples of which have been structurally characterized at the full-length level to explore their innate synergistic mechanisms. This work reports the crystal structures of a double-domain phosphagen kinase in both apo and ligand-bound states, revealing a novel asymmetric L-shaped arrangement of the two domains. Unexpectedly, the interdomain connections are not based on a flexible hinge linker but on a rigid secondary-structure element: a long α-helix that tethers the tandem domains in relatively fixed positions. Besides the connective helix, the two domains also contact each other directly and form an interdomain interface in which hydrogen bonds and hydrophobic interactions further stabilize the L-shaped domain arrangement. Molecular-dynamics simulations show that the interface is generally stable, suggesting that the asymmetric domain arrangement crystallographically observed in the present study is not a conformational state simply restrained by crystal-packing forces. It is possible that the asymmetrically arranged tandem domains could provide a structural basis for further studies of the interdomain synergy.

  5. Synthesis and Characterization of Hierarchical Structured TiO2 Nanotubes and Their Photocatalytic Performance on Methyl Orange

    Directory of Open Access Journals (Sweden)

    Kai Liu

    2015-01-01

    Full Text Available Hierarchical structured TiO2 nanotubes were prepared by mechanical ball milling of highly ordered TiO2 nanotube arrays grown by electrochemical anodization of titanium foil. Scanning electron microscopy, transmission electron microscopy, X-ray diffraction, specific surface area analysis, UV-visible absorption spectroscopy, photocurrent measurement, photoluminescence spectra, electrochemical impedance spectra, and photocatalytic degradation test were applied to characterize the nanocomposites. Surface area increased as the milling time extended. After 5 h ball milling, TiO2 hierarchical nanotubes exhibited a corn-like shape and exhibited enhanced photoelectrochemical activity in comparison to commercial P25. The superior photocatalytic activity is suggested to be due to the combined advantages of high surface area of nanoparticles and rapid electron transfer as well as collection of the nanotubes in the hierarchical structure. The hierarchical structured TiO2 nanotubes could be applied into flexible applications on solar cells, sensors, and other photoelectrochemical devices.

  6. Frontoparietal Connectivity and Hierarchical Structure of the Brain’s Functional Network during Sleep

    Directory of Open Access Journals (Sweden)

    Victor I Spoormaker

    2012-05-01

    Full Text Available Frontal and parietal regions are associated with some of the most complex cognitive functions, and several frontoparietal resting-state networks can be observed in wakefulness. We used functional magnetic resonance imaging (fMRI data acquired in polysomnographically validated wakefulness, light sleep and slow-wave sleep to examine the hierarchical structure of a low-frequency functional brain network, and to examine whether frontoparietal connectivity would disintegrate in sleep. Whole-brain analyses with hierarchical cluster analysis on predefined atlases were performed, as well as regression of inferior parietal lobules seeds against all voxels in the brain, and an evaluation of the integrity of voxel time-courses in subcortical regions-of-interest. We observed that frontoparietal functional connectivity disintegrated in sleep stage 1 and was absent in deeper sleep stages. Slow-wave sleep was characterized by strong hierarchical clustering of local submodules. Frontoparietal connectivity between inferior parietal lobules and superior medial and right frontal gyrus was lower in sleep stages than in wakefulness. Moreover, thalamus voxels showed maintained integrity in sleep stage 1, making intrathalamic desynchronization an unlikely source of reduced thalamocortical connectivity in this sleep stage. Our data suggest a transition from a globally integrated functional brain network in wakefulness to a disintegrated network consisting of local submodules in slow-wave sleep, in which frontoparietal inter-modular nodes may play a crucial role, possibly in combination with the thalamus.

  7. Hierarchical system for autonomous sensing-healing of delamination in large-scale composite structures

    Science.gov (United States)

    Minakuchi, Shu; Sun, Denghao; Takeda, Nobuo

    2014-10-01

    This study combines our hierarchical fiber-optic-based delamination detection system with a microvascular self-healing material to develop the first autonomous sensing-healing system applicable to large-scale composite structures. In this combined system, embedded vascular modules are connected through check valves to a surface-mounted supply tube of a pressurized healing agent while fiber-optic-based sensors monitor the internal pressure of these vascular modules. When delamination occurs, the healing agent flows into the vascular modules breached by the delamination and infiltrates the damage for healing. At the same time, the pressure sensors identify the damaged modules by detecting internal pressure changes. This paper begins by describing the basic concept of the combined system and by discussing the advantages that arise from its hierarchical nature. The feasibility of the system is then confirmed through delamination infiltration tests. Finally, the hierarchical system is validated in a plate specimen by focusing on the detection and infiltration of the damage. Its self-diagnostic function is also demonstrated.

  8. Category breadth and hierarchical structure in personality: studies of asymmetries in judgments of trait implications.

    Science.gov (United States)

    Hampson, S E; John, O P; Goldberg, L R

    1986-07-01

    Trait breadth and hierarchical organization are central structural principles in personality theory and research. We assume that personality traits serve as categories of behavioral events, and we define the breadth of traits as the diversity of their behavioral manifestations. We show that trait breadth can be measured reliably both by ratings and by direct comparisons within trait pairs. We assess the hierarchical relations between traits differing in breadth, using a task in which subjects select the most meaningful of two statements, such as "To be talkative is a way of being extroverted" versus "To be extroverted is a way of being talkative." The extent of asymmetry in the choices of the subject sample provides an index of the degree of class inclusion. In four studies, we demonstrate that the size of the asymmetry effect is highly predictable from differences in trait breadth, even when the effects of social desirability, familiarity, and meaningfulness are controlled. Moreover, we replicate these findings in two cultural contexts, and even at the level of individual subjects. The availability of traits at different hierarchical levels requires personality psychologists to make an explicit choice about level of abstraction, especially when studying behavioral consistency. We discuss the prospect for identifying a generally preferred or "basic" level of personality description.

  9. Structural and photovoltaic characteristics of hierarchical ZnO nanostructures electrodes

    Energy Technology Data Exchange (ETDEWEB)

    Saleem, Muhammad, E-mail: saleem.malikape@gmail.com [Department of Physics, COMSATS Institute of Information Technology, Lahore 54000 (Pakistan); Key Laboratory of Optoelectronic Technology and Systems of the Education Ministry of China, Chongqing University, Chongqing 400044 (China); Fang, L. [Key Laboratory of Optoelectronic Technology and Systems of the Education Ministry of China, Chongqing University, Chongqing 400044 (China); Shaukat, Saleem F.; Ahmad, M. Ashfaq [Department of Physics, COMSATS Institute of Information Technology, Lahore 54000 (Pakistan); Raza, Rizwan, E-mail: razahussaini786@gmail.com [Department of Physics, COMSATS Institute of Information Technology, Lahore 54000 (Pakistan); Akhtar, Majid Niaz; Jamil, Ayesha; Aslam, Samia [Department of Physics, COMSATS Institute of Information Technology, Lahore 54000 (Pakistan); Abbas, Ghazanfar [Department of Physics, COMSATS Institute of Information Technology, Islamabad 44000 (Pakistan)

    2015-04-15

    Highlights: • Hierarchically ZnO nanostructures electrodes were grown using hot plate magnetic stirring at different growth reaction temperature. • We have investigated the effect of working temperature of 160°, 170°, 180°, and 190° on the growth mechanism of nanospheres and on the power conversion efficiency of DSSCs. • ZnO nanospheres with perfect aggregation show superior power conversion efficiency of 1.24% which is about 83% higher than nanoparticles DSSC. • An obvious vogue is that the overall power conversion efficiency decreases as the degree of the spherical aggregation is gradually destroyed. - Abstract: Structural and photovoltaic characteristics of hierarchical ZnO nanostructures solar cell have been studied in relation to growth reaction temperature. It is found that the hierarchical ZnO nanostructures network to act not only as large surface area substrates but also as a transport medium for electrons injected from the dye molecules. The incident photon-to-current conversion efficiency is decreased by increasing the growth reaction temperature of ZnO electrodes. The best conversion efficiency of a 0.25 cm{sup 2} cell is measured to be 1.24% under 100 mW cm{sup −2} irradiation.

  10. Data with hierarchical structure: impact of intraclass correlation and sample size on type-I error.

    Science.gov (United States)

    Musca, Serban C; Kamiejski, Rodolphe; Nugier, Armelle; Méot, Alain; Er-Rafiy, Abdelatif; Brauer, Markus

    2011-01-01

    Least squares analyses (e.g., ANOVAs, linear regressions) of hierarchical data leads to Type-I error rates that depart severely from the nominal Type-I error rate assumed. Thus, when least squares methods are used to analyze hierarchical data coming from designs in which some groups are assigned to the treatment condition, and others to the control condition (i.e., the widely used "groups nested under treatment" experimental design), the Type-I error rate is seriously inflated, leading too often to the incorrect rejection of the null hypothesis (i.e., the incorrect conclusion of an effect of the treatment). To highlight the severity of the problem, we present simulations showing how the Type-I error rate is affected under different conditions of intraclass correlation and sample size. For all simulations the Type-I error rate after application of the popular Kish (1965) correction is also considered, and the limitations of this correction technique discussed. We conclude with suggestions on how one should collect and analyze data bearing a hierarchical structure.

  11. Data with hierarchical structure: impact of intraclass correlation and sample size on Type-I error

    Directory of Open Access Journals (Sweden)

    Serban C Musca

    2011-04-01

    Full Text Available Least squares analyses (e.g., ANOVAs, linear regressions of hierarchical data leads to Type-I error rates that depart severely from the nominal Type-I error rate assumed. Thus, when least squares methods are used to analyze hierarchical data coming from designs in which some groups are assigned to the treatment condition, and others to the control condition (i.e., the widely used "groups nested under treatment" experimental design, the Type-I error rate is seriously inflated, leading too often to the incorrect rejection of the null hypothesis (i.e., the incorrect conclusion of an effect of the treatment. To highlight the severity of the problem, we present simulations showing how the Type-I error rate is affected under different conditions of intraclass correlation and sample size. For all simulations the Type-I error rate after application of the popular Kish (1965 correction is also considered, and the limitations of this correction technique discussed. We conclude with suggestions on how one should collect and analyze data bearing a hierarchical structure.

  12. Quantifying information transfer by protein domains: Analysis of the Fyn SH2 domain structure

    DEFF Research Database (Denmark)

    Lenaerts, Tom; Ferkinghoff-Borg, Jesper; Stricher, Francois

    2008-01-01

    that directly relates protein structural dynamics to information exchange between functional sites is still lacking. Results: Here we introduce a method to analyze protein dynamics within the framework of information theory and show that signal transduction within proteins can be considered as a particular...... distal communication is achieved. We illustrate the approach by analyzing information transfer by the SH2 domain of Fyn tyrosine kinase, obtained from Monte Carlo dynamics simulations. Our analysis reveals that the Fyn SH2 domain forms a noisy communication channel that couples residues located...... by crossing the core of the SH2 domain. Conclusion: As a result, our method provides a means to directly map the exchange of biological information on the structure of protein domains, making it clear how binding triggers conformational changes in the protein structure. As such it provides a structural road...

  13. A structural genomics analysis of histidine kinase sensor domains

    Science.gov (United States)

    Cheung, Jonah

    2005-11-01

    Histidine kinase sensors are a part of a two-component system of protein signaling in prokaryotes and lower eukaryotes that relay an external environmental signal to an adaptive internal cellular response. Signal transduction occurs via phosphotransfer between a sensor protein and a response regulator which interact in tandem. The sensor is usually a transmembrane protein that contains a conserved cytoplasmic histidine kinase transmitter domain and a modular periplasmic sensor domain. The response regulator is cytoplasmic protein that contains a receiver domain that interacts with the histidine kinase, and an output domain that interacts with regulators of transcription or chemotaxis. My work focuses on the X-ray structure determination of a variety of bacterial sensor domains, based on a structural genomics analysis of the entire sensor domain family. Structures of the NarX, DcuS, LisK, and DctB sensor domains have been solved to atomic resolution, some in both ligand-bound and ligand-free states. Two distinct structural folds have been revealed---all-alpha helical and mixed alpha-beta. An analysis of the structures reveals a possible mechanism of transmembrane signaling in histidine kinase sensors as a sliding-piston motion between transmembrane helices. Although there is great diversity in ligand binding, there appears to be a small number of distinct sensor domain folds for which structural representatives of two have been solved. A final synthesis of the structural information with a comprehensive bio-informatics analysis of all histidine kinase sensor domain sequences allows fold prediction for over 400 sensor domains, in a step towards mapping the entire structural landscape of this protein family.

  14. Hierarchical structures of correlations networks among Turkey’s exports and imports by currencies

    Science.gov (United States)

    Kocakaplan, Yusuf; Deviren, Bayram; Keskin, Mustafa

    2012-12-01

    We have examined the hierarchical structures of correlations networks among Turkey’s exports and imports by currencies for the 1996-2010 periods, using the concept of a minimal spanning tree (MST) and hierarchical tree (HT) which depend on the concept of ultrametricity. These trees are useful tools for understanding and detecting the global structure, taxonomy and hierarchy in financial markets. We derived a hierarchical organization and build the MSTs and HTs during the 1996-2001 and 2002-2010 periods. The reason for studying two different sub-periods, namely 1996-2001 and 2002-2010, is that the Euro (EUR) came into use in 2001, and some countries have made their exports and imports with Turkey via the EUR since 2002, and in order to test various time-windows and observe temporal evolution. We have carried out bootstrap analysis to associate a value of the statistical reliability to the links of the MSTs and HTs. We have also used the average linkage cluster analysis (ALCA) to observe the cluster structure more clearly. Moreover, we have obtained the bidimensional minimal spanning tree (BMST) due to economic trade being a bidimensional problem. From the structural topologies of these trees, we have identified different clusters of currencies according to their proximity and economic ties. Our results show that some currencies are more important within the network, due to a tighter connection with other currencies. We have also found that the obtained currencies play a key role for Turkey’s exports and imports and have important implications for the design of portfolio and investment strategies.

  15. Structural and histone binding ability characterizations of human PWWP domains.

    Directory of Open Access Journals (Sweden)

    Hong Wu

    Full Text Available BACKGROUND: The PWWP domain was first identified as a structural motif of 100-130 amino acids in the WHSC1 protein and predicted to be a protein-protein interaction domain. It belongs to the Tudor domain 'Royal Family', which consists of Tudor, chromodomain, MBT and PWWP domains. While Tudor, chromodomain and MBT domains have long been known to bind methylated histones, PWWP was shown to exhibit histone binding ability only until recently. METHODOLOGY/PRINCIPAL FINDINGS: The PWWP domain has been shown to be a DNA binding domain, but sequence analysis and previous structural studies show that the PWWP domain exhibits significant similarity to other 'Royal Family' members, implying that the PWWP domain has the potential to bind histones. In order to further explore the function of the PWWP domain, we used the protein family approach to determine the crystal structures of the PWWP domains from seven different human proteins. Our fluorescence polarization binding studies show that PWWP domains have weak histone binding ability, which is also confirmed by our NMR titration experiments. Furthermore, we determined the crystal structures of the BRPF1 PWWP domain in complex with H3K36me3, and HDGF2 PWWP domain in complex with H3K79me3 and H4K20me3. CONCLUSIONS: PWWP proteins constitute a new family of methyl lysine histone binders. The PWWP domain consists of three motifs: a canonical β-barrel core, an insertion motif between the second and third β-strands and a C-terminal α-helix bundle. Both the canonical β-barrel core and the insertion motif are directly involved in histone binding. The PWWP domain has been previously shown to be a DNA binding domain. Therefore, the PWWP domain exhibits dual functions: binding both DNA and methyllysine histones. ENHANCED VERSION: This article can also be viewed as an enhanced version in which the text of the article is integrated with interactive 3D representations and animated transitions. Please note that a web

  16. The history of the CATH structural classification of protein domains

    OpenAIRE

    Sillitoe, I; Dawson, N.; Thornton, J; Orengo, C.

    2015-01-01

    This article presents a historical review of the protein structure classification database CATH. Together with the SCOP database, CATH remains comprehensive and reasonably up-to-date with the now more than 100,000 protein structures in the PDB. We review the expansion of the CATH and SCOP resources to capture predicted domain structures in the genome sequence data and to provide information on the likely functions of proteins mediated by their constituent domains. The establishment of compreh...

  17. A study of hierarchical structure on South China industrial electricity-consumption correlation

    Science.gov (United States)

    Yao, Can-Zhong; Lin, Ji-Nan; Liu, Xiao-Feng

    2016-02-01

    Based on industrial electricity-consumption data of five southern provinces of China from 2005 to 2013, we study the industrial correlation mechanism with MST (minimal spanning tree) and HT (hierarchical tree) models. First, we comparatively analyze the industrial electricity-consumption correlation structure in pre-crisis and after-crisis period using MST model and Bootstrap technique of statistical reliability test of links. Results exhibit that all industrial electricity-consumption trees of five southern provinces of China in pre-crisis and after-crisis time are in formation of chain, and the "center-periphery structure" of those chain-like trees is consistent with industrial specialization in classical industrial chain theory. Additionally, the industrial structure of some provinces is reorganized and transferred in pre-crisis and after-crisis time. Further, the comparative analysis with hierarchical tree and Bootstrap technique demonstrates that as for both observations of GD and overall NF, the industrial electricity-consumption correlation is non-significant clustered in pre-crisis period, whereas it turns significant clustered in after-crisis time. Therefore we propose that in perspective of electricity-consumption, their industrial structures are directed to optimized organization and global correlation. Finally, the analysis of distance of HTs verifies that industrial reorganization and development may strengthen market integration, coordination and correlation of industrial production. Except GZ, other four provinces have a shorter distance of industrial electricity-consumption correlation in after-crisis period, revealing a better performance of regional specialization and integration.

  18. Structural and functional analysis of multi-interface domains.

    Directory of Open Access Journals (Sweden)

    Liang Zhao

    Full Text Available A multi-interface domain is a domain that can shape multiple and distinctive binding sites to contact with many other domains, forming a hub in domain-domain interaction networks. The functions played by the multiple interfaces are usually different, but there is no strict bijection between the functions and interfaces as some subsets of the interfaces play the same function. This work applies graph theory and algorithms to discover fingerprints for the multiple interfaces of a domain and to establish associations between the interfaces and functions, based on a huge set of multi-interface proteins from PDB. We found that about 40% of proteins have the multi-interface property, however the involved multi-interface domains account for only a tiny fraction (1.8% of the total number of domains. The interfaces of these domains are distinguishable in terms of their fingerprints, indicating the functional specificity of the multiple interfaces in a domain. Furthermore, we observed that both cooperative and distinctive structural patterns, which will be useful for protein engineering, exist in the multiple interfaces of a domain.

  19. Structural Dynamics of the Cereblon Ligand Binding Domain

    Science.gov (United States)

    Hartmann, Marcus D.; Boichenko, Iuliia; Coles, Murray; Lupas, Andrei N.; Hernandez Alvarez, Birte

    2015-01-01

    Cereblon, a primary target of thalidomide and its derivatives, has been characterized structurally from both bacteria and animals. Especially well studied is the thalidomide binding domain, CULT, which shows an invariable structure across different organisms and in complex with different ligands. Here, based on a series of crystal structures of a bacterial representative, we reveal the conformational flexibility and structural dynamics of this domain. In particular, we follow the unfolding of large fractions of the domain upon release of thalidomide in the crystalline state. Our results imply that a third of the domain, including the thalidomide binding pocket, only folds upon ligand binding. We further characterize the structural effect of the C-terminal truncation resulting from the mental-retardation linked R419X nonsense mutation in vitro and offer a mechanistic hypothesis for its irresponsiveness to thalidomide. At 1.2Å resolution, our data provide a view of thalidomide binding at atomic resolution. PMID:26024445

  20. Structural dynamics of the cereblon ligand binding domain.

    Directory of Open Access Journals (Sweden)

    Marcus D Hartmann

    Full Text Available Cereblon, a primary target of thalidomide and its derivatives, has been characterized structurally from both bacteria and animals. Especially well studied is the thalidomide binding domain, CULT, which shows an invariable structure across different organisms and in complex with different ligands. Here, based on a series of crystal structures of a bacterial representative, we reveal the conformational flexibility and structural dynamics of this domain. In particular, we follow the unfolding of large fractions of the domain upon release of thalidomide in the crystalline state. Our results imply that a third of the domain, including the thalidomide binding pocket, only folds upon ligand binding. We further characterize the structural effect of the C-terminal truncation resulting from the mental-retardation linked R419X nonsense mutation in vitro and offer a mechanistic hypothesis for its irresponsiveness to thalidomide. At 1.2Å resolution, our data provide a view of thalidomide binding at atomic resolution.

  1. Structure of synaptophysin: a hexameric MARVEL-domain channel protein.

    Science.gov (United States)

    Arthur, Christopher P; Stowell, Michael H B

    2007-06-01

    Synaptophysin I (SypI) is an archetypal member of the MARVEL-domain family of integral membrane proteins and one of the first synaptic vesicle proteins to be identified and cloned. Most all MARVEL-domain proteins are involved in membrane apposition and vesicle-trafficking events, but their precise role in these processes is unclear. We have purified mammalian SypI and determined its three-dimensional (3D) structure by using electron microscopy and single-particle 3D reconstruction. The hexameric structure resembles an open basket with a large pore and tenuous interactions within the cytosolic domain. The structure suggests a model for Synaptophysin's role in fusion and recycling that is regulated by known interactions with the SNARE machinery. This 3D structure of a MARVEL-domain protein provides a structural foundation for understanding the role of these important proteins in a variety of biological processes.

  2. Structural characterization of thyroglobulin type-1 domains of equistatin

    NARCIS (Netherlands)

    Galesa, K.; Pain, R.; Jongsma, M.A.; Turk, V.; Lenarci, B.

    2003-01-01

    Equistatin is a protein composed of three thyroglobulin type-1 domains. It inhibits papain-like cysteine proteinases and the aspartic proteinase, cathepsin D. To determine the structural basis for this inhibition we cloned and expressed the separated domains (eq d-1, eq d-2, eq d-3) in Pichia pastor

  3. Hierarchical robot control structure and Newton's divided difference approach to robot path planning

    Institute of Scientific and Technical Information of China (English)

    2001-01-01

    A hierarchical robot control is proposed for robot soccer system. The Newton' s divided difference is utilized in robot path planning. This paper describes the problems encoutered, software design considerations, vision algorithm and controls of individual robots. The solutions.to the problems implemented are simple and di rect. It is observed that many of the ideas and solutions can be evolved based on simple theories and concepts. This paper focuses on software structure of multi-agent controls, vision algorithm and simple path planning method.

  4. Revised domain structure of ulvan lyase and characterization of the first ulvan binding domain

    Science.gov (United States)

    Melcher, Rebecca L. J.; Neumann, Marten; Fuenzalida Werner, Juan Pablo; Gröhn, Franziska; Moerschbacher, Bruno M.

    2017-01-01

    Biomass waste products from green algae have recently been given new life, as these polysaccharides have potential applications in industry, agriculture, and medicine. One such polysaccharide group called ulvans displays many different, potentially useful properties that arise from their structural versatility. Hence, performing structural analyses on ulvan is crucial for future applications. However, chemical reaction–based analysis methods cannot fully characterize ulvan and tend to alter its structure. Thus, better methods require well-characterized ulvan-degrading enzymes. Therefore, we analysed a previously sequenced ulvan lyase (GenebankTM reference number JN104480) and characterized its domains. We suggest that the enzyme consists of a shorter than previously described catalytic domain, a newly identified substrate binding domain, and a C-terminal type 9 secretion system signal peptide. By separately expressing the two domains in E. coli, we confirmed that the binding domain is ulvan specific, having higher affinity for ulvan than most lectins for their ligands (affinity constant: 105 M−1). To our knowledge, this is the first description of an ulvan-binding domain. Overall, identifying this new binding domain is one step towards engineering ulvan enzymes that can be used to characterize ulvan, e.g. through enzymatic/mass spectrometric fingerprinting analyses, and help unlock its full potential. PMID:28327560

  5. Hierarchically structured lithium titanate for ultrafast charging in long-life high capacity batteries

    Science.gov (United States)

    Odziomek, Mateusz; Chaput, Frédéric; Rutkowska, Anna; Świerczek, Konrad; Olszewska, Danuta; Sitarz, Maciej; Lerouge, Frédéric; Parola, Stephane

    2017-05-01

    High-performance Li-ion batteries require materials with well-designed and controlled structures on nanometre and micrometre scales. Electrochemical properties can be enhanced by reducing crystallite size and by manipulating structure and morphology. Here we show a method for preparing hierarchically structured Li4Ti5O12 yielding nano- and microstructure well-suited for use in lithium-ion batteries. Scalable glycothermal synthesis yields well-crystallized primary 4-8 nm nanoparticles, assembled into porous secondary particles. X-ray photoelectron spectroscopy reveals presence of Ti+4 only; combined with chemical analysis showing lithium deficiency, this suggests oxygen non-stoichiometry. Electron microscopy confirms hierarchical morphology of the obtained material. Extended cycling tests in half cells demonstrates capacity of 170 mAh g-1 and no sign of capacity fading after 1,000 cycles at 50C rate (charging completed in 72 s). The particular combination of nanostructure, microstructure and non-stoichiometry for the prepared lithium titanate is believed to underlie the observed electrochemical performance of material.

  6. Hierarchical organization in the temporal structure of infant-direct speech and song.

    Science.gov (United States)

    Falk, Simone; Kello, Christopher T

    2017-06-01

    Caregivers alter the temporal structure of their utterances when talking and singing to infants compared with adult communication. The present study tested whether temporal variability in infant-directed registers serves to emphasize the hierarchical temporal structure of speech. Fifteen German-speaking mothers sang a play song and told a story to their 6-months-old infants, or to an adult. Recordings were analyzed using a recently developed method that determines the degree of nested clustering of temporal events in speech. Events were defined as peaks in the amplitude envelope, and clusters of various sizes related to periods of acoustic speech energy at varying timescales. Infant-directed speech and song clearly showed greater event clustering compared with adult-directed registers, at multiple timescales of hundreds of milliseconds to tens of seconds. We discuss the relation of this newly discovered acoustic property to temporal variability in linguistic units and its potential implications for parent-infant communication and infants learning the hierarchical structures of speech and language. Copyright © 2017 Elsevier B.V. All rights reserved.

  7. The relationships between electricity consumption and GDP in Asian countries, using hierarchical structure methods

    Science.gov (United States)

    Kantar, Ersin; Keskin, Mustafa

    2013-11-01

    This study uses hierarchical structure methods (minimal spanning tree (MST) and hierarchical tree (HT)) to examine the relationship between energy consumption and economic growth in a sample of 30 Asian countries covering the period 1971-2008. These countries are categorized into four panels based on the World Bank income classification, namely high, upper middle, lower middle, and low income. In particular, we use the data of electricity consumption and real gross domestic product (GDP) per capita to detect the topological properties of the countries. We show a relationship between electricity consumption and economic growth by using the MST and HT. We also use the bootstrap technique to investigate a value of the statistical reliability to the links of the MST. Finally, we use a clustering linkage procedure in order to observe the cluster structure. The results of the structural topologies of these trees are as follows: (i) we identified different clusters of countries according to their geographical location and economic growth, (ii) we found a strong relationship between energy consumption and economic growth for all income groups considered in this study and (iii) the results are in good agreement with the causal relationship between electricity consumption and economic growth.

  8. Controllable synthesis of branched ZnO/Si nanowire arrays with hierarchical structure.

    Science.gov (United States)

    Huang, Shengli; Yang, Qianqian; Yu, Binbin; Li, Dingguo; Zhao, Ruisheng; Li, Shuping; Kang, Junyong

    2014-01-01

    A rational approach for creating branched ZnO/Si nanowire arrays with hierarchical structure was developed based on a combination of three simple and cost-effective synthesis pathways. The crucial procedure included growth of crystalline Si nanowire arrays as backbones by chemical etching of Si substrates, deposition of ZnO thin film as a seed layer by magnetron sputtering, and fabrication of ZnO nanowire arrays as branches by hydrothermal growth. The successful synthesis of ZnO/Si heterogeneous nanostructures was confirmed by morphologic, structural, and optical characterizations. The roles of key experimental parameters, such as the etchant solution, the substrate direction, and the seed layer on the hierarchical nanostructure formation, were systematically investigated. It was demonstrated that an etchant solution with an appropriate redox potential of the oxidant was crucial for a moderate etching speed to achieve a well-aligned Si nanowire array with solid and round surface. Meanwhile, the presence of gravity gradient was a key issue for the growth of branched ZnO nanowire arrays. The substrate should be placed vertically or facedown in contrast to the solution surface during the hydrothermal growth. Otherwise, only the condensation of the ZnO nanoparticles took place in a form of film on the substrate surface. The seed layer played another important role in the growth of ZnO nanowire arrays, as it provided nucleation sites and determined the growing direction and density of the nanowire arrays for reducing the thermodynamic barrier. The results of this study might provide insight on the synthesis of hierarchical three-dimensional nanostructure materials and offer an approach for the development of complex devices and advanced applications.

  9. Structure and function of the phosphothreonine-specific FHA domain.

    Science.gov (United States)

    Mahajan, Anjali; Yuan, Chunhua; Lee, Hyun; Chen, Eric S-W; Wu, Pei-Yu; Tsai, Ming-Daw

    2008-12-23

    The forkhead-associated (FHA) domain is the only known phosphoprotein-binding domain that specifically recognizes phosphothreonine (pThr) residues, distinguishing them from phosphoserine (pSer) residues. In contrast to its very strict specificity toward pThr, the FHA domain recognizes very diverse patterns in the residues surrounding the pThr residue. For example, the FHA domain of Ki67, a protein associated with cellular proliferation, binds to an extended target surface involving residues remote from the pThr, whereas the FHA domain of Dun1, a DNA damage-response kinase, specifically recognizes a doubly phosphorylated Thr-Gln (TQ) cluster by virtue of its possessing two pThr-binding sites. The FHA domain exists in various proteins with diverse functions and is particularly prevalent among proteins involved in the DNA damage response. Despite a very short history, a number of unique structural and functional properties of the FHA domain have been uncovered. This review highlights the diversity of biological functions of the FHA domain-containing proteins and the structural bases for the novel binding specificities and multiple binding modes of FHA domains.

  10. Manifold domain structure of double films with perpendicular magnetic anisotropy

    Energy Technology Data Exchange (ETDEWEB)

    Coffey, D; Diez-Ferrer, J L; Corredor, E C; Arnaudas, J I [Instituto de Nanociencia de Aragon, Universidad de Zaragoza, Zaragoza (Spain); Ciria, M, E-mail: ciria@unizar.es [Departamento de Fisica de la Materia Condensada, Universidad de Zaragoza, Zaragoza (Spain)

    2011-03-23

    We present epitaxial structures made of twin nickel blocks with perpendicular magnetic anisotropy separated by a copper layer which, for some values of this interleaving layer, show domain structures with four levels of contrast in magnetic force microscopy images. This manifold domain structure implies that the magnetization in the Ni blocks, in addition to the parallel orientation, undergoes a non-collinear configuration with respect to each other. To explain this result we consider a magnetoelastic domain structure with M in the plane that can elude the clamping done by the substrate with an average strain of -42 x 10{sup -6} ({approx}70% of the bulk value). Thus, the out-of-plane anisotropy is balanced and a biquadratic exchange coupling can stabilize the non-collinear domain configurations between the Ni blocks.

  11. SHIPS: Spectral Hierarchical clustering for the Inference of Population Structure in genetic studies.

    Science.gov (United States)

    Bouaziz, Matthieu; Paccard, Caroline; Guedj, Mickael; Ambroise, Christophe

    2012-01-01

    Inferring the structure of populations has many applications for genetic research. In addition to providing information for evolutionary studies, it can be used to account for the bias induced by population stratification in association studies. To this end, many algorithms have been proposed to cluster individuals into genetically homogeneous sub-populations. The parametric algorithms, such as Structure, are very popular but their underlying complexity and their high computational cost led to the development of faster parametric alternatives such as Admixture. Alternatives to these methods are the non-parametric approaches. Among this category, AWclust has proven efficient but fails to properly identify population structure for complex datasets. We present in this article a new clustering algorithm called Spectral Hierarchical clustering for the Inference of Population Structure (SHIPS), based on a divisive hierarchical clustering strategy, allowing a progressive investigation of population structure. This method takes genetic data as input to cluster individuals into homogeneous sub-populations and with the use of the gap statistic estimates the optimal number of such sub-populations. SHIPS was applied to a set of simulated discrete and admixed datasets and to real SNP datasets, that are data from the HapMap and Pan-Asian SNP consortium. The programs Structure, Admixture, AWclust and PCAclust were also investigated in a comparison study. SHIPS and the parametric approach Structure were the most accurate when applied to simulated datasets both in terms of individual assignments and estimation of the correct number of clusters. The analysis of the results on the real datasets highlighted that the clusterings of SHIPS were the more consistent with the population labels or those produced by the Admixture program. The performances of SHIPS when applied to SNP data, along with its relatively low computational cost and its ease of use make this method a promising

  12. LRIG1 extracellular domain: structure and function analysis.

    Science.gov (United States)

    Xu, Yibin; Soo, Priscilla; Walker, Francesca; Zhang, Hui Hua; Redpath, Nicholas; Tan, Chin Wee; Nicola, Nicos A; Adams, Timothy E; Garrett, Thomas P; Zhang, Jian-Guo; Burgess, Antony W

    2015-05-22

    We have expressed and purified three soluble fragments of the human LRIG1-ECD (extracellular domain): the LRIG1-LRR (leucine-rich repeat) domain, the LRIG1-3Ig (immunoglobulin-like) domain, and the LRIG1-LRR-1Ig fragment using baculovirus vectors in insect cells. The two LRIG1 domains crystallised so that we have been able to determine the three-dimensional structures at 2.3Å resolution. We developed a three-dimensional structure for the LRIG1-ECD using homology modelling based on the LINGO-1 structure. The LRIG1-LRR domain and the LRIG1-LRR-1Ig fragment are monomers in solution, whereas the LRIG1-3Ig domain appears to be dimeric. We could not detect any binding of the LRIG1 domains or the LRIG1-LRR-1Ig fragment to the EGF receptor (EGFR), either in solution using biosensor analysis or when the EGFR was expressed on the cell surface. The FLAG-tagged LRIG1-LRR-1Ig fragment binds weakly to colon cancer cells regardless of the presence of EGFRs. Similarly, neither the soluble LRIG1-LRR nor the LRIG1-3Ig domains nor the full-length LRIG1 co-expressed in HEK293 cells inhibited ligand-stimulated activation of cell-surface EGFR.

  13. Hierarchical periodic micro/nano-structures on nitinol and their influence on oriented endothelialization and anti-thrombosis.

    Science.gov (United States)

    Nozaki, Kosuke; Shinonaga, Togo; Ebe, Noriko; Horiuchi, Naohiro; Nakamura, Miho; Tsutsumi, Yusuke; Hanawa, Takao; Tsukamoto, Masahiro; Yamashita, Kimihiro; Nagai, Akiko

    2015-12-01

    The applications of hierarchical micro/nano-structures, which possess properties of two-scale roughness, have been studied in various fields. In this study, hierarchical periodic micro/nano-structures were fabricated on nitinol, an equiatomic Ni-Ti alloy, using a femtosecond laser for the surface modification of intravascular stents. By controlling the laser fluence, two types of surfaces were developed: periodic nano- and micro/nano-structures. Evaluation of water contact angles indicated that the nano-surface was hydrophilic and the micro/nano-surface was hydrophobic. Endothelial cells aligned along the nano-structures on both surfaces, whereas platelets failed to adhere to the micro/nano-surface. Decorrelation between the responses of the two cell types and the results of water contact angle analysis were a result of the pinning effect. This is the first study to show the applicability of hierarchical periodic micro/nano-structures for surface modification of nitinol.

  14. The effect of surfaces on the domain structure

    Science.gov (United States)

    Korneta, W.; Pytel, Z.

    1987-12-01

    The second-order phase transition from the paramagnetic phase to the ferromagnetic phase with domain structure in a ferromagnetic film with strong uniaxial anisotropy is studied. The easy axis is perpendicular to the surface of the film. It is assumed that the short range interactions depend on the distance to the surface. The phase diagram of the film and the form of the domain structure which occurs at the phase transition temperature are obtained.

  15. Toughening mystery of natural rubber deciphered by double network incorporating hierarchical structures.

    Science.gov (United States)

    Zhou, Weiming; Li, Xiangyang; Lu, Jie; Huang, Ningdong; Chen, Liang; Qi, Zeming; Li, Liangbin; Liang, Haiyi

    2014-12-16

    As an indispensible material for modern society, natural rubber possesses peerless mechanical properties such as strength and toughness over its artificial analogues, which remains a mystery. Intensive experimental and theoretical investigations have revealed the self-enhancement of natural rubber due to strain-induced crystallization. However a rigorous model on the self-enhancement, elucidating natural rubber's extraordinary mechanical properties, is obscured by deficient understanding of the local hierarchical structure under strain. With spatially resolved synchrotron radiation micro-beam scanning X-ray diffraction we discover weak oscillation in distributions of strain-induced crystallinity around crack tip for stretched natural rubber film, demonstrating a soft-hard double network structure. The fracture energy enhancement factor obtained by utilizing the double network model indicates an enhancement of toughness by 3 orders. It's proposed that upon stretching spontaneously developed double network structures integrating hierarchy at multi length-scale in natural rubber play an essential role in its remarkable mechanical performance.

  16. How Are Researching and Reading Interwieved during Retrieval from Hierarchically Structured Documents?

    DEFF Research Database (Denmark)

    Hertzum, Morten; Lalmas, M.; Frøkjær, Erik

    2001-01-01

    Effective use of information retrieval systems requires that users know when to – temporarily – cease searching to do some reading and where to start reading. In hierarchically structured documents, users can to some extent interchange searching and reading by entering the text at different levels...... in the structure. Based on an experiment where 83 subjects solved 20 tasks each, we find that the subjects spend at least one third of their time reading, irrespective of whether the system they use offers browsing and/or querying. The subjects prefer reading the text in chunks that span multiple levels...... of the structure. As much as 21% of the tasks are solved by subjects who enter the text at a level above the texts containing the answer and rely on reading from there. In relation to queries, multi-level texts are used to extend hits with more detail or, occasionally, more context. Designers should consider how...

  17. Towards an automatic classification of protein structural domains based on structural similarity

    Directory of Open Access Journals (Sweden)

    Gibrat Jean-Francois

    2008-01-01

    Full Text Available Abstract Background Formal classification of a large collection of protein structures aids the understanding of evolutionary relationships among them. Classifications involving manual steps, such as SCOP and CATH, face the challenge of increasing volume of available structures. Automatic methods such as FSSP or Dali Domain Dictionary, yield divergent classifications, for reasons not yet fully investigated. One possible reason is that the pairwise similarity scores used in automatic classification do not adequately reflect the judgments made in manual classification. Another possibility is the difference between manual and automatic classification procedures. We explore the degree to which these two factors might affect the final classification. Results We use DALI, SHEBA and VAST pairwise scores on the SCOP C class domains, to investigate a variety of hierarchical clustering procedures. The constructed dendrogram is cut in a variety of ways to produce a partition, which is compared to the SCOP fold classification. Ward's method dendrograms led to partitions closest to the SCOP fold classification. Dendrogram- or tree-cutting strategies fell into four categories according to the similarity of resulting partitions to the SCOP fold partition. Two strategies which optimize similarity to SCOP, gave an average of 72% true positives rate (TPR, at a 1% false positive rate. Cutting the largest size cluster at each step gave an average of 61% TPR which was one of the best strategies not making use of prior knowledge of SCOP. Cutting the longest branch at each step produced one of the worst strategies. We also developed a method to detect irreducible differences between the best possible automatic partitions and SCOP, regardless of the cutting strategy. These differences are substantial. Visual examination of hard-to-classify proteins confirms our previous finding, that global structural similarity of domains is not the only criterion used in the SCOP

  18. Comparative structural analysis of lipid binding START domains.

    Directory of Open Access Journals (Sweden)

    Ann-Gerd Thorsell

    Full Text Available BACKGROUND: Steroidogenic acute regulatory (StAR protein related lipid transfer (START domains are small globular modules that form a cavity where lipids and lipid hormones bind. These domains can transport ligands to facilitate lipid exchange between biological membranes, and they have been postulated to modulate the activity of other domains of the protein in response to ligand binding. More than a dozen human genes encode START domains, and several of them are implicated in a disease. PRINCIPAL FINDINGS: We report crystal structures of the human STARD1, STARD5, STARD13 and STARD14 lipid transfer domains. These represent four of the six functional classes of START domains. SIGNIFICANCE: Sequence alignments based on these and previously reported crystal structures define the structural determinants of human START domains, both those related to structural framework and those involved in ligand specificity. ENHANCED VERSION: This article can also be viewed as an enhanced version in which the text of the article is integrated with interactive 3D representations and animated transitions. Please note that a web plugin is required to access this enhanced functionality. Instructions for the installation and use of the web plugin are available in Text S1.

  19. Self-assembly of hierarchically ordered structures in DNA nanotube systems

    Science.gov (United States)

    Glaser, Martin; Schnauß, Jörg; Tschirner, Teresa; Schmidt, B. U. Sebastian; Moebius-Winkler, Maximilian; Käs, Josef A.; Smith, David M.

    2016-05-01

    The self-assembly of molecular and macromolecular building blocks into organized patterns is a complex process found in diverse systems over a wide range of size and time scales. The formation of star- or aster-like configurations, for example, is a common characteristic in solutions of polymers or other molecules containing multi-scaled, hierarchical assembly processes. This is a recurring phenomenon in numerous pattern-forming systems ranging from cellular constructs to solutions of ferromagnetic colloids or synthetic plastics. To date, however, it has not been possible to systematically parameterize structural properties of the constituent components in order to study their influence on assembled states. Here, we circumvent this limitation by using DNA nanotubes with programmable mechanical properties as our basic building blocks. A small set of DNA oligonucleotides can be chosen to hybridize into micron-length DNA nanotubes with a well-defined circumference and stiffness. The self-assembly of these nanotubes to hierarchically ordered structures is driven by depletion forces caused by the presence of polyethylene glycol. This trait allowed us to investigate self-assembly effects while maintaining a complete decoupling of density, self-association or bundling strength, and stiffness of the nanotubes. Our findings show diverse ranges of emerging structures including heterogeneous networks, aster-like structures, and densely bundled needle-like structures, which compare to configurations found in many other systems. These show a strong dependence not only on concentration and bundling strength, but also on the underlying mechanical properties of the nanotubes. Similar network architectures to those caused by depletion forces in the low-density regime are obtained when an alternative hybridization-based bundling mechanism is employed to induce self-assembly in an isotropic network of pre-formed DNA nanotubes. This emphasizes the universal effect inevitable

  20. Friction and adhesion of hierarchical carbon nanotube structures for biomimetic dry adhesives: multiscale modeling.

    Science.gov (United States)

    Hu, Shihao; Jiang, Haodan; Xia, Zhenhai; Gao, Xiaosheng

    2010-09-01

    With unique hierarchical fibrillar structures on their feet, gecko lizards can walk on vertical walls or even ceilings. Recent experiments have shown that strong binding along the shear direction and easy lifting in the normal direction can be achieved by forming unidirectional carbon nanotube array with laterally distributed tips similar to gecko's feet. In this study, a multiscale modeling approach was developed to analyze friction and adhesion behaviors of this hierarchical fibrillar system. Vertically aligned carbon nanotube array with laterally distributed segments at the end was simulated by coarse grained molecular dynamics. The effects of the laterally distributed segments on friction and adhesion strengths were analyzed, and further adopted as cohesive laws used in finite element analysis at device scale. The results show that the laterally distributed segments play an essential role in achieving high force anisotropy between normal and shear directions in the adhesives. Finite element analysis reveals a new friction-enhanced adhesion mechanism of the carbon nanotube array, which also exists in gecko adhesive system. The multiscale modeling provides an approach to bridge the microlevel structures of the carbon nanotube array with its macrolevel adhesive behaviors, and the predictions from this modeling give an insight into the mechanisms of gecko-mimicking dry adhesives.

  1. Emergence of hierarchical structure mirroring linguistic composition in a recurrent neural network.

    Science.gov (United States)

    Hinoshita, Wataru; Arie, Hiroaki; Tani, Jun; Okuno, Hiroshi G; Ogata, Tetsuya

    2011-05-01

    We show that a Multiple Timescale Recurrent Neural Network (MTRNN) can acquire the capabilities to recognize, generate, and correct sentences by self-organizing in a way that mirrors the hierarchical structure of sentences: characters grouped into words, and words into sentences. The model can control which sentence to generate depending on its initial states (generation phase) and the initial states can be calculated from the target sentence (recognition phase). In an experiment, we trained our model over a set of unannotated sentences from an artificial language, represented as sequences of characters. Once trained, the model could recognize and generate grammatical sentences, even if they were not learned. Moreover, we found that our model could correct a few substitution errors in a sentence, and the correction performance was improved by adding the errors to the training sentences in each training iteration with a certain probability. An analysis of the neural activations in our model revealed that the MTRNN had self-organized, reflecting the hierarchical linguistic structure by taking advantage of the differences in timescale among its neurons: in particular, neurons that change the fastest represented "characters", those that change more slowly, "words", and those that change the slowest, "sentences".

  2. Chemical-mechanical stability of the hierarchical structure of shell nacre

    Institute of Scientific and Technical Information of China (English)

    2010-01-01

    The hierarchical structure and mechanical property of shell nacre are experimentally investigated from the new aspects of chemical stability and chemistry-mechanics coupling. Through chemical deproteinization or demineralization methods together with characterization techniques at micro/nano scales,it is found that the nacre of abalone,haliotis discus hannai,contains a hierarchical structure stacked with irregular aragonite platelets and interplatelet organic matrix thin layers. Yet the aragonite platelet itself is a nanocomposite consisting of nanoparticles and intraplatelet organic matrix framework. The mean diameter of the nanoparticles and the distribution of framework are quite different for different platelets. Though the interplatelet and in-traplatelet organic matrix can be both decomposed by sodium hydroxide solution,the chemical stability of individual aragonite platelets is much higher than that of the microstructure stacked with them. Further,macroscopic bending test or nanoindentation experiment is performed on the micro/nanostructure of nacre after sodium hydroxide treatment. It is found that the Young’s modulus of both the stacked microstructure and nanocomposite platelet reduced. The reduction of the microstructure is more remark than that of the platelet. Therefore the chemical-mechanical stability of the nanocomposite platelet itself is much higher than that of the stacked microstructure of nacre.

  3. Hierarchical structures induce long-range dynamical correlations in written texts.

    Science.gov (United States)

    Alvarez-Lacalle, E; Dorow, B; Eckmann, J-P; Moses, E

    2006-05-23

    Thoughts and ideas are multidimensional and often concurrent, yet they can be expressed surprisingly well sequentially by the translation into language. This reduction of dimensions occurs naturally but requires memory and necessitates the existence of correlations, e.g., in written text. However, correlations in word appearance decay quickly, while previous observations of long-range correlations using random walk approaches yield little insight on memory or on semantic context. Instead, we study combinations of words that a reader is exposed to within a "window of attention," spanning about 100 words. We define a vector space of such word combinations by looking at words that co-occur within the window of attention, and analyze its structure. Singular value decomposition of the co-occurrence matrix identifies a basis whose vectors correspond to specific topics, or "concepts" that are relevant to the text. As the reader follows a text, the "vector of attention" traces out a trajectory of directions in this "concept space." We find that memory of the direction is retained over long times, forming power-law correlations. The appearance of power laws hints at the existence of an underlying hierarchical network. Indeed, imposing a hierarchy similar to that defined by volumes, chapters, paragraphs, etc. succeeds in creating correlations in a surrogate random text that are identical to those of the original text. We conclude that hierarchical structures in text serve to create long-range correlations, and use the reader's memory in reenacting some of the multidimensionality of the thoughts being expressed.

  4. The contribution of reinforcement sensitivity to the personality-psychopathology hierarchical structure in childhood and adolescence.

    Science.gov (United States)

    Slobodskaya, Helena R

    2016-11-01

    This study examined the contribution of reinforcement sensitivity to the hierarchical structure of child personality and common psychopathology in community samples of parent reports of children aged 2-18 (N = 968) and self-reports of adolescents aged 10-18 (N = 1,543) using the Inventory of Child Individual Differences-Short version (ICID-S), the Strengths and Difficulties Questionnaire (SDQ), and the Sensitivity to Punishment and Sensitivity to Reward Questionnaire (SPSRQ). A joint higher-order factor analysis of the ICID-S and SDQ scales suggested a 4-factor solution; congruence coefficients indicated replicability of the factors across the 2 samples at all levels of the personality-psychopathology hierarchy. The canonical correlation analyses indicated that reinforcement sensitivity and personality-psychopathology dimensions shared much of their variance. The main contribution of reinforcement sensitivity was through opposing effects of reward and punishment sensitivities. The superordinate factors Beta and Internalizing were best predicted by reinforcement sensitivity, followed by the Externalizing and Positive personality factors. These findings provide evidence for consistency of the hierarchical structure of personality and common psychopathology across informants and highlight the role of reinforcement systems in the development of normal and abnormal patterns of behavior and affect. (PsycINFO Database Record

  5. Hierarchically structured self-supported latex films for flexible and semi-transparent electronics

    Energy Technology Data Exchange (ETDEWEB)

    Määttänen, Anni, E-mail: anni.maattanen@abo.fi [Laboratory of Physical Chemistry, Faculty of Science and Engineering, Center for Functional Materials, Åbo Akademi University, Porthaninkatu 3, 20500, Turku (Finland); Ihalainen, Petri, E-mail: petri.ihalainen@abo.fi [Laboratory of Physical Chemistry, Faculty of Science and Engineering, Center for Functional Materials, Åbo Akademi University, Porthaninkatu 3, 20500, Turku (Finland); Törngren, Björn, E-mail: bjorn.torngren@abo.fi [Laboratory of Physical Chemistry, Faculty of Science and Engineering, Center for Functional Materials, Åbo Akademi University, Porthaninkatu 3, 20500, Turku (Finland); Rosqvist, Emil, E-mail: emil.rosqvist@abo.fi [Laboratory of Physical Chemistry, Faculty of Science and Engineering, Center for Functional Materials, Åbo Akademi University, Porthaninkatu 3, 20500, Turku (Finland); Pesonen, Markus, E-mail: markus.pesonen@abo.fi [Physics, Faculty of Science and Engineering, Center for Functional Materials, Åbo Akademi University, Porthaninkatu 3, 20500, Turku (Finland); Peltonen, Jouko, E-mail: jouko.peltonen@abo.fi [Laboratory of Physical Chemistry, Faculty of Science and Engineering, Center for Functional Materials, Åbo Akademi University, Porthaninkatu 3, 20500, Turku (Finland)

    2016-02-28

    Graphical abstract: - Highlights: • Transparent self-supported latex films were fabricated by a peel-off process. • Various template substrates were used for creating e.g. hierarchically structured latex films. • Ultra-thin and semi-transparent conductive gold electrodes were evaporated on the latex films.Electrochemical experiments were carried out to verify the applicability of the electrodes. - Abstract: Different length scale alterations in topography, surface texture, and symmetry are known to evoke diverse cell behavior, including adhesion, orientation, motility, cytoskeletal condensation, and modulation of intracellular signaling pathways. In this work, self-supported latex films with well-defined isotropic/anisotropic surface features and hierarchical morphologies were fabricated by a peel-off process from different template surfaces. In addition, the latex films were used as substrates for evaporated ultrathin gold films with nominal thicknesses of 10 and 20 nm. Optical properties and topography of the samples were characterized using UV–vis spectroscopy and Atomic Force Microscopy (AFM) measurements, respectively. The latex films showed high-level transmittance of visible light, enabling the fabrication of semi-transparent gold electrodes. Electrochemical impedance spectroscopy (EIS) measurements were carried out for a number of days to investigate the long-term stability of the electrodes. The effect of 1-octadecanethiol (ODT) and HS(CH{sub 2}){sub 11}OH (MuOH) thiolation and protein (human serum albumin, HSA) adsorption on the impedance and capacitance was studied. In addition, cyclic voltammetry (CV) measurements were carried out to determine active medicinal components, i.e., caffeic acid with interesting biological activities and poorly water-soluble anti-inflammatory drug, piroxicam. The results show that the fabrication procedure presented in this study enables the formation of platforms with hierarchical morphologies for multimodal

  6. Domain and wall structures in films with helical magnetization profile

    Energy Technology Data Exchange (ETDEWEB)

    Dubuget, Vincent [Laboratoire d' Electrodynamique des Materiaux Avances, Universite Francois Rabelais, CNRS UMR 6157, Parc de Grandmont, F-37200 Tours (France); CEA, DAM, Le Ripault, F-37260 Monts (France); Thiaville, Andre [Laboratoire de Physique des Solides, Universite Paris-Sud, CNRS UMR 8502, Bat. 510, F-91405 Orsay (France); Adenot-Engelvin, Anne-Lise, E-mail: anne-lise.adenot-engelvin@cea.f [CEA, DAM, Le Ripault, F-37260 Monts (France); Duverger, Francois; Dubourg, Sebastien [CEA, DAM, Le Ripault, F-37260 Monts (France)

    2011-06-15

    We study soft magnetic bilayers having orthogonal, in-plane easy axes. The layers are thicker than the Bloch wall width linked to the anisotropy, so that a helical magnetization with a large angle exists across the sample thickness. The magnetic domains structure has been investigated at both sample surfaces, using magneto-optical microscopy. The domain structure is found to be similar to that of double films with biquadratic coupling. Two kinds of domain walls are identified, namely with a 90{sup o} and 180{sup o} rotation of the average magnetization. The detailed structure and energy of these walls are studied by micromagnetic calculations. - Research highlights: This paper is devoted to the peculiar domain structure resulting from an anisotropy distribution in the thickness of the sample, realized through specific elaboration conditions. The helical magnetization profile obtained leads to a complex dynamic behaviour described and modelled in Phys.Rev. B 80, 134412 (published in October 2009) which has been already cited three times. This paper sheds light on of the demagnetized state of such samples: a variety of domains structure has been observed by Kerr microscopy, under various saturation fields. The most striking conclusion is driven by the analysis of the magnetization process which implies the co-existence of two types of domain walls in the sample, with four possible directions for the mean magnetization. The magnetization profile of the two walls has been confirmed by numerical simulation.

  7. Structural basis of Smoothened regulation by its extracellular domains

    Science.gov (United States)

    Byrne, Eamon F. X.; Sircar, Ria; Miller, Paul S.; Hedger, George; Luchetti, Giovanni; Nachtergaele, Sigrid; Tully, Mark D.; Mydock-McGrane, Laurel; Covey, Douglas F.; Rambo, Robert P.; Sansom, Mark S. P.; Newstead, Simon; Rohatgi, Rajat; Siebold, Christian

    2016-07-01

    Developmental signals of the Hedgehog (Hh) and Wnt families are transduced across the membrane by Frizzled-class G-protein-coupled receptors (GPCRs) composed of both a heptahelical transmembrane domain (TMD) and an extracellular cysteine-rich domain (CRD). How the large extracellular domains of GPCRs regulate signalling by the TMD is unknown. We present crystal structures of the Hh signal transducer and oncoprotein Smoothened, a GPCR that contains two distinct ligand-binding sites: one in its TMD and one in the CRD. The CRD is stacked atop the TMD, separated by an intervening wedge-like linker domain. Structure-guided mutations show that the interface between the CRD, linker domain and TMD stabilizes the inactive state of Smoothened. Unexpectedly, we find a cholesterol molecule bound to Smoothened in the CRD binding site. Mutations predicted to prevent cholesterol binding impair the ability of Smoothened to transmit native Hh signals. Binding of a clinically used antagonist, vismodegib, to the TMD induces a conformational change that is propagated to the CRD, resulting in loss of cholesterol from the CRD-linker domain-TMD interface. Our results clarify the structural mechanism by which the activity of a GPCR is controlled by ligand-regulated interactions between its extracellular and transmembrane domains.

  8. Domain walls, domain wall transformations and structural changes in permalloy nanowires when subjected to current pulses

    Energy Technology Data Exchange (ETDEWEB)

    Hempe, E.M. [Department of Materials Science and Metallurgy, University of Cambridge, Pembroke Street, Cambridge CB2 3QZ (United Kingdom); Department of Physics, Universitaet Regensburg, Universitaetsstrasse 31, 93040 Regensburg (Germany); Klaeui, M.; Krzyk, S.; Ruediger, U. [Fachbereich Physik, Universitaet Konstanz, Universitaetsstrasse 10, 78457 Konstanz (Germany); Kasama, T. [Department of Materials Science and Metallurgy, University of Cambridge, Pembroke Street, Cambridge CB2 3QZ (United Kingdom); Backes, D. [Fachbereich Physik, Universitaet Konstanz, Universitaetsstrasse 10, 78457 Konstanz (Germany); Laboratory for Micro- and Nanotechnology, Paul Scherrer Institut, 5232 Villigen PSI (Switzerland); Junginger, F. [Department of Materials Science and Metallurgy, University of Cambridge, Pembroke Street, Cambridge CB2 3QZ (United Kingdom); Fachbereich Physik, Universitaet Konstanz, Universitaetsstrasse 10, 78457 Konstanz (Germany); Heyderman, L.J. [Laboratory for Micro- and Nanotechnology, Paul Scherrer Institut, 5232 Villigen PSI (Switzerland); Dunin-Borkowski, R. [Department of Materials Science and Metallurgy, University of Cambridge, Pembroke Street, Cambridge CB2 3QZ (United Kingdom); Center for Electron Nanoscopy, DTU (Denmark)

    2007-12-15

    We report the direct transmission electron microscopy observation of spin structure transformations in nanoscale Permalloy zigzag wires due to Joule heating during the injection of current pulses. This heating is sufficient to overcome the energy barriers separating the different metastable domain wall spin structures. Due to the large energy barriers these are stable and observable at room temperature by off-axis electron holography and Fresnel imaging. The interaction between different domain walls is probed and the main pinning mechanism is determined to be the edge roughness. In addition to transformations, we also report on thermally assisted domain wall hopping between two pinning sites and structural changes that occur when the samples are subjected to even higher current pulses. (copyright 2008 WILEY-VCH Verlag GmbH and Co. KGaA, Weinheim) (orig.)

  9. Structure, dynamics and evolution of disk galaxies in a hierarchical formation scenario

    CERN Document Server

    Firmani, C

    1999-01-01

    Using galaxy evolutionary models in a hierarchical formation scenario, we predict the structure, dynamics and evolution of disk galaxies in a LCDM universe. Our models include star formation and hydrodynamics of the ISM. We find that the Tully-Fisher relation (TFR) in the I and H bands is an imprint of the mass-velocity relation of the cosmological dark halos. The scatter of the TFR originates mainly from the scatter in the dark halo structure and, to a minor extension, from the dispersion of the primordial spin parameter lambda. Our models allow us to explain why low and high surface brightness galaxies have the same TFR. The disk gas fractions predicted agree with the observations. The disks formed within the growing halos have nearly exponential surface brightness and flat rotation curves. Towards high redshifts, the zero-point of the TFR in the H band increases while in the B-band it slightly decreases.

  10. Superior water repellency of water strider legs with hierarchical structures: experiments and analysis.

    Science.gov (United States)

    Feng, Xi-Qiao; Gao, Xuefeng; Wu, Ziniu; Jiang, Lei; Zheng, Quan-Shui

    2007-04-24

    Water striders are a type of insect with the remarkable ability to stand effortlessly and walk quickly on water. This article reports the water repellency mechanism of water strider legs. Scanning electron microscope (SEM) observations reveal the uniquely hierarchical structure on the legs, consisting of numerous oriented needle-shaped microsetae with elaborate nanogrooves. The maximal supporting force of a single leg against water surprisingly reaches up to 152 dynes, about 15 times the total body weight of this insect. We theoretically demonstrate that the cooperation of nanogroove structures on the oriented microsetae, in conjunction with the wax on the leg, renders such water repellency. This finding might be helpful in the design of innovative miniature aquatic devices and nonwetting materials.

  11. Fischer-Tropsch synthesis on hierarchically structured cobalt nanoparticle/carbon nanofiber/carbon felt composites.

    Science.gov (United States)

    Zarubova, Sarka; Rane, Shreyas; Yang, Jia; Yu, Yingda; Zhu, Ye; Chen, De; Holmen, Anders

    2011-07-18

    The hierarchically structured carbon nanofibers (CNFs)/carbon felt composites, in which CNFs were directly grown on the surface of microfibers in carbon felt, forming a CNF layer on a micrometer range that completely covers the microfiber surfaces, were tested as a novel support material for cobalt nanoparticles in the highly exothermic Fischer-Tropsch (F-T) synthesis. A compact, fixed-bed reactor, made of disks of such composite materials, offered the advantages of improved heat and mass transfer, relatively low pressure drop, and safe handling of immobilized CNFs. An efficient 3-D thermal conductive network in the composite provided a relatively uniform temperature profile, whereas the open structure of the CNF layer afforded an almost 100 % effectiveness of Co nanoparticles in the F-T synthesis in the fixed bed. The greatly improved mass and heat transport makes the compact reactor attractive for applications in the conversion of biomass, coal, and natural gas to liquids.

  12. Asymmetric flexural behavior from bamboo's functionally graded hierarchical structure: underlying mechanisms.

    Science.gov (United States)

    Habibi, Meisam K; Samaei, Arash T; Gheshlaghi, Behnam; Lu, Jian; Lu, Yang

    2015-04-01

    As one of the most renewable resources on Earth, bamboo has recently attracted increasing interest for its promising applications in sustainable structural purposes. Its superior mechanical properties arising from the unique functionally-graded (FG) hierarchical structure also make bamboo an excellent candidate for bio-mimicking purposes in advanced material design. However, despite its well-documented, impressive mechanical characteristics, the intriguing asymmetry in flexural behavior of bamboo, alongside its underlying mechanisms, has not yet been fully understood. Here, we used multi-scale mechanical characterizations assisted with advanced environmental scanning electron microscopy (ESEM) to investigate the asymmetric flexural responses of natural bamboo (Phyllostachys edulis) strips under different loading configurations, during "elastic bending" and "fracture failure" stages, with their respective deformation mechanisms at microstructural level. Results showed that the gradient distribution of the vascular bundles along the thickness direction is mainly responsible for the exhibited asymmetry, whereas the hierarchical fiber/parenchyma cellular structure plays a critical role in alternating the dominant factors for determining the distinctly different failure mechanisms. A numerical model has been likewise adopted to validate the effective flexural moduli of bamboo strips as a function of their FG parameters, while additional experiments on uniaxial loading of bamboo specimens were performed to assess the tension-compression asymmetry, for further understanding of the microstructure evolution of bamboo's outer and innermost layers under different bending states. This work could provide insights to help the processing of novel bamboo-based composites and enable the bio-inspired design of advanced structural materials with desired flexural behavior.

  13. Microstructure of polycrystalline PBTTT films: domain mapping and structure formation.

    Science.gov (United States)

    Schuettfort, Torben; Watts, Benjamin; Thomsen, Lars; Lee, Mijung; Sirringhaus, Henning; McNeill, Christopher R

    2012-02-28

    We utilize near-edge X-ray absorption fine structure (NEXAFS) spectroscopy and scanning transmission X-ray microscopy (STXM) to study the microstructure and domain structure of polycrystalline films of the semiconducting polymer poly(2,5-bis(3-tetradecylthiophen-2-yl)thieno[3,2-b]thiophene) (PBTTT). Total electron yield NEXAFS spectroscopy is used to examine the surface structure of the first 1-2 molecular layers, while bulk-sensitive STXM is used to produce maps of domain orientation and order sampled through the entire film thickness. We study different phases of PBTTT including as-cast, terraced and nanoribbon morphologies produced via spin-coating as well as aligned films of as-cast and nanoribbon morphologies produced by zone-casting. For the terraced morphology, domains are observed that are larger than the size of the terraced surface features, and the calculated degree of order is reduced compared to the nanoribbon morphology. For zone-cast films, we find that, although little optical anisotropy is observed in the bulk of as-cast films, a high degree of surface structural anisotropy is observed with NEXAFS spectroscopy, similar to what is observed in annealed nanoribbon films. This observation indicates that the aligned surface structure in unannealed zone-cast films templates the bulk ordering of the aligned nanoribbon phase. STXM domain mapping of aligned nanoribbon films reveals elongated, micrometer-wide domains with each domain misoriented with respect to its neighbor by up to 45°, but with broad domain boundaries. Within each nanoribbon domain, a high degree of X-ray dichroism is observed, indicating correlated ordering throughout the bulk of the film.

  14. The porous carbon derived from water hyacinth with well-designed hierarchical structure for supercapacitors

    Science.gov (United States)

    Zheng, Kaiwen; Li, Yuanyuan; Zhu, Ming; Yu, Xi; Zhang, Mengyan; Shi, Ling; Cheng, Jue

    2017-10-01

    A hierarchical porous water hyacinth-derived carbon (WHC) is fabricated by pre-carbonization and KOH activation for supercapacitors. The physicochemical properties of WHC are researched by scanning electron microscopy (SEM), N2 adsorption-desorption measurements, X-ray diffraction (XRD), Raman spectroscopy and X-ray photoelectron spectroscopy (XPS). The results indicate that WHC exhibits hierarchical porous structure and high specific surface area of 2276 m2/g. And the electrochemical properties of WHC are studied by cyclic voltammetry (CV), galvanostatic charge-discharge and electrochemical impedance spectroscopy (EIS) tests. In a three-electrode test system, WHC shows considerable specific capacitance of 344.9 F/g at a current density of 0.5 A/g, good rate performance with 225.8 F/g even at a current density of 30 A/g, and good cycle stability with 95% of the capacitance retention after 10000 cycles of charge-discharge at a current density of 5 A/g. Moreover, WHC cell delivers an energy density of 23.8 Wh/kg at 0.5 A/g and a power density of 15.7 kW/kg at 10 A/g. Thus, using water hyacinth as carbon source to fabricate supercapacitors electrodes is a promising approach for developing inexpensive, sustainable and high-performance carbon materials. Additionally, this study supports the sustainable development and the control of biological invasion.

  15. Highly Stretchable Superhydrophobic Composite Coating Based on Self-Adaptive Deformation of Hierarchical Structures.

    Science.gov (United States)

    Hu, Xin; Tang, Changyu; He, Zhoukun; Shao, Hong; Xu, Keqin; Mei, Jun; Lau, Woon-Ming

    2017-05-01

    With the rapid development of stretchable electronics, functional textiles, and flexible sensors, water-proof protection materials are required to be built on various highly flexible substrates. However, maintaining the antiwetting of superhydrophobic surface under stretching is still a big challenge since the hierarchical structures at hybridized micro-nanoscales are easily damaged following large deformation of the substrates. This study reports a highly stretchable and mechanically stable superhydrophobic surface prepared by a facile spray coating of carbon black/polybutadiene elastomeric composite on a rubber substrate followed by thermal curing. The resulting composite coating can maintain its superhydrophobic property (water contact angle ≈170° and sliding angle superhydrophobic property. Furthermore, the experimental observation and modeling analysis reveal that the stable superhydrophobic properties of the composite coating are attributed to the unique self-adaptive deformation ability of 3D hierarchical roughness of the composite coating, which delays the Cassie-Wenzel transition of surface wetting. In addition, it is first observed that the damaged coating can automatically recover its superhydrophobicity via a simple stretching treatment without incorporating additional hydrophobic materials. © 2017 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

  16. Construct validity of the WISC-IV with a referred sample: direct versus indirect hierarchical structures.

    Science.gov (United States)

    Canivez, Gary L

    2014-03-01

    The Wechsler Intelligence Scale for Children-Fourth Edition (WISC-IV) is one of the most frequently used intelligence tests in clinical assessments of children with learning difficulties. Construct validity studies of the WISC-IV have generally supported the higher order structure with four correlated first-order factors and one higher-order general intelligence factor, but recent studies have supported an alternate model in which general intelligence is conceptualized as a breadth factor rather than a superordinate factor (M. W. Watkins, 2010, Structure of the Wechsler Intelligence Scale for Children-Fourth Edition among a national sample of referred students, Psychological Assessment, Vol. 22, pp. 782-787; M. W. Watkins, G. L. Canivez, T. James, K. & R. Good, in press, Construct validity of the WISC-IVUK with a large referred Irish sample, International Journal of School and Educational Psychology). WISC-IV core subtest data obtained from evaluations to assess learning difficulties in 345 children (224 boys, 121 girls) were examined. One through four, first order factor models and indirect versus direct hierarchical models were compared using confirmatory factor analyses. The correlated four-factor Wechsler model provided good fit to these data, but the direct hierarchical model showed statistically significant improvement over the indirect hierarchical model and correlated four-factor model. The direct hierarchical model was judged the best explanation of the WISC-IV factor structure, with the general factor accounting for 71.6% of the common variance while the first order factors accounted for 2.4-10.3% of the common variance. Thus, the results with the present sample of referred children were similar to those from other investigations (G. E. Gignac, 2005, Revisiting the factor structure of the WAIS-R: Insights through nested factor modeling, Assessment, Vol. 12, pp. 320-329; G. E. Gignac, 2006, The WAIS-III as a nested factors model: A useful alternative to

  17. Magnetic domain structure in thin CoPt perpendicular magnetic anisotropy films

    Directory of Open Access Journals (Sweden)

    Komine T.

    2013-01-01

    Full Text Available The relation between thickness and domain structure of Co80Pt20 perpendicular magnetic anisotropy films was investigated through experiments and micromagnetic simulation. The films with thickness over 10 nm exhibited clear maze domain structure, while for the films thinner than 10 nm the domain structure abruptly changed from maze domain to irregular and large domain as the thickness became thinner. The irregular domain had narrower domain wall width than maze domain.

  18. Light-Emitting Diodes with Hierarchical and Multifunctional Surface Structures for High Light Extraction and an Antifouling Effect.

    Science.gov (United States)

    Leem, Young-Chul; Park, Jung Su; Kim, Joon Heon; Myoung, NoSoung; Yim, Sang-Youp; Jeong, Sehee; Lim, Wantae; Kim, Sung-Tae; Park, Seong-Ju

    2016-01-13

    Bioinspired hierarchical structures on the surface of vertical light-emitting diodes (VLEDs) are demonstrated by combining a self-assembled dip-coating process and nanopatterning transfer method using thermal release tape. This versatile surface structure can efficiently reduce the total internal reflection and add functions, such as superhydrophobicity and high oleophobicity, to achieve an antifouling effect for VLEDs.

  19. Determination of genetic structure of germplasm collections: are traditional hierarchical clustering methods appropriate for molecular marker data?

    Science.gov (United States)

    Odong, T L; van Heerwaarden, J; Jansen, J; van Hintum, T J L; van Eeuwijk, F A

    2011-07-01

    Despite the availability of newer approaches, traditional hierarchical clustering remains very popular in genetic diversity studies in plants. However, little is known about its suitability for molecular marker data. We studied the performance of traditional hierarchical clustering techniques using real and simulated molecular marker data. Our study also compared the performance of traditional hierarchical clustering with model-based clustering (STRUCTURE). We showed that the cophenetic correlation coefficient is directly related to subgroup differentiation and can thus be used as an indicator of the presence of genetically distinct subgroups in germplasm collections. Whereas UPGMA performed well in preserving distances between accessions, Ward excelled in recovering groups. Our results also showed a close similarity between clusters obtained by Ward and by STRUCTURE. Traditional cluster analysis can provide an easy and effective way of determining structure in germplasm collections using molecular marker data, and, the output can be used for sampling core collections or for association studies.

  20. Domain Model Structure - SAHG | LSDB Archive [Life Science Database Archive metadata

    Lifescience Database Archive (English)

    Full Text Available List Contact us SAHG Domain Model Structure Data detail Data name Domain Model Structure DOI 10.18908/lsdba....Download License Update History of This Database Site Policy | Contact Us Domain Model Structure - SAHG | LSDB Archive ...

  1. Self-similar Hierarchical Wrinkles as a Potential Multifunctional Smart Window with Simultaneously Tunable Transparency, Structural Color, and Droplet Transport.

    Science.gov (United States)

    Lin, Gaojian; Chandrasekaran, Prashant; Lv, Cunjing; Zhang, Qiuting; Tang, Yichao; Han, Lin; Yin, Jie

    2017-08-09

    Smart window has immense potential for energy savings in architectural and vehicular applications, while most studies focus on the tunability of a single property of optical transmittance. Here we explore harnessing dynamically tunable hierarchical wrinkles for design of a potential multifunctional smart window with combined structural color and water droplet transport control. The self-similar hierarchical wrinkles with both nanoscale and microscale features are generated on a prestrained poly(dimethylsiloxane) elastomer through sequential strain release and multistep oxygen plasma treatment. We show that the hierarchically wrinkled elastomer displays both opaqueness and iridescent structural color. We find that restretching/releasing the elastomer leads to the reversible and repeatable switch from opaqueness to transparency, arising from the flattening of large wrinkles (micrometer scale), while a nonvanishing structural color occurs due to the nondisappearing small wrinkles (nanoscale). The unique features of combined reversible large wrinkles and irreversible small wrinkles during hierarchical wrinkling are well reproduced by corresponding finite element simulation. The criteria for generating self-similar hierarchical wrinkles is revealed through a simplified theoretical model and validated by experiments. In addition to its tunable optical property, we further show its ability in control of water droplet transport on demand through mechanical stretching and release. We find that an initially pinned water droplet on the tilted hierarchically wrinkled surface starts to slide when the surface is stretched, and becomes pinned again upon strain release. Such a process is reversible and repeatable. The hierarchically wrinkled surface could find broad potential applications not only in multifunctional smart windows with additional features of aesthetics and water collection, but in microfluidics, design of slippery surfaces, and directional water transportation.

  2. Strain phase separation: Formation of ferroelastic domain structures

    Science.gov (United States)

    Xue, Fei; Li, Yongjun; Gu, Yijia; Zhang, Jinxing; Chen, Long-Qing

    2016-12-01

    Phase decomposition is a well-known process leading to the formation of two-phase mixtures. Here we show that a strain imposed on a ferroelastic crystal promotes the formation of mixed phases and domains, i.e., strain phase separation with local strains determined by a common tangent construction on the free energy versus strain curves. It is demonstrated that a domain structure can be understood using the concepts of domain/phase rule, lever rule, and coherent and incoherent strain phase separation, in a complete analogy to phase decomposition. The proposed strain phase separation model is validated using phase-field simulations and experimental observations of PbTi O3 and BiFe O3 thin films as examples. The proposed model provides a simple tool to guide and design domain structures of ferroelastic systems.

  3. Structure of the kinase domain of Gilgamesh from Drosophila melanogaster.

    Science.gov (United States)

    Han, Ni; Chen, CuiCui; Shi, Zhubing; Cheng, Dianlin

    2014-04-01

    The CK1 family kinases regulate multiple cellular aspects and play important roles in Wnt/Wingless and Hedgehog signalling. The kinase domain of Drosophila Gilgamesh isoform I (Gilgamesh-I), a homologue of human CK1-γ, was purified and crystallized. Crystals of methylated Gilgamesh-I kinase domain with a D210A mutation diffracted to 2.85 Å resolution and belonged to space group P43212, with unit-cell parameters a = b = 52.025, c = 291.727 Å. The structure of Gilgamesh-I kinase domain, which was determined by molecular replacement, has conserved catalytic elements and an active conformation. Structural comparison indicates that an extended loop between the α1 helix and the β4 strand exists in the Gilgamesh-I kinase domain. This extended loop may regulate the activity and function of Gilgamesh-I.

  4. Domain structure and phase transition in Sc-doped zirconia

    Science.gov (United States)

    Brunauer, G.; Boysen, H.; Frey, F.; Ehrenberg, H.

    2002-01-01

    The temperature dependence of the domain structure associated with the ferroelastic phase transition (Fm↔R bar 3 m) in ZrO2 doped with 11% Sc2O3 has been determined from a peak shape analysis of high-resolution synchrotron x-ray powder diffraction data. In the temperature region of coexisting phases the observed characteristic anisotropic broadening and asymmetry of the lines is modelled by three different phases: a main rhombohedral phase, a distorted rhombohedral phase with a smaller c/a ratio, and a cubic phase. The latter two are assigned to the internal structure of the domain walls between two adjacent twin domains. The size and amount of the cubic phase show an initially slow increase with temperature followed by a very steep increase and a slow one after that. The size of the (main) rhombohedral domains remains nearly constant, while (micro-) strain in the distorted regions gradually decreases.

  5. Domain Structures in Nematic Liquid Crystals on a Polycarbonate Surface

    Directory of Open Access Journals (Sweden)

    Vasily F. Shabanov

    2013-08-01

    Full Text Available Alignment of nematic liquid crystals on polycarbonate films obtained with the use of solvents with different solvations is studied. Domain structures occurring during the growth on the polymer surface against the background of the initial thread-like or schlieren texture are demonstrated. It is established by optical methods that the domains are stable formations visualizing the polymer surface structures. In nematic droplets, the temperature-induced transition from the domain structure with two extinction bands to the structure with four bands is observed. This transition is shown to be caused by reorientation of the nematic director in the liquid crystal volume from the planar alignment to the homeotropic state with the pronounced radial configuration of nematic molecules on the surface. The observed textures are compared with different combinations of the volume LC orientations and the radial distribution of the director field and the disclination lines at the polycarbonate surface.

  6. Analysis of time-domain scattering by periodic structures

    Science.gov (United States)

    Gao, Yixian; Li, Peijun

    2016-11-01

    This paper is devoted to the mathematical analysis of a time-domain electromagnetic scattering by periodic structures which are known as diffraction gratings. The scattering problem is reduced equivalently into an initial-boundary value problem in a bounded domain by using an exact transparent boundary condition. The well-posedness and stability of the solution are established for the reduced problem. Moreover, a priori energy estimates are obtained with minimum regularity requirement for the data and explicit dependence on the time.

  7. Multiscale mechanics of hierarchical structure/property relationships in calcified tissues and tissue/material interfaces

    Energy Technology Data Exchange (ETDEWEB)

    Katz, J. Lawrence [School of Computing and Engineering, University of Missouri-Kansas City, Kansas City, MO (United States) and School of Dentistry, University of Missouri-Kansas City, Kansas City, MO (United States)]. E-mail: katzjl@umkc.edu; Misra, Anil [School of Computing and Engineering, University of Missouri-Kansas City, Kansas City, MO (United States); Spencer, Paulette [School of Dentistry, University of Missouri-Kansas City, Kansas City, MO (United States); Wang, Yong [School of Dentistry, University of Missouri-Kansas City, Kansas City, MO (United States); Bumrerraj, Sauwanan [School of Medicine, Khon Kaen University, Khon Kaen (Thailand); Nomura, Tsutomu [School of Dentistry, Niigata University, Niigata (Japan); Eppell, Steven J. [Case School of Engineering, Case Western Reserve University, Cleveland, OH (United States); Tabib-Azar, Massood [Case School of Engineering, Case Western Reserve University, Cleveland, OH (United States)

    2007-04-15

    This paper presents a review plus new data that describes the role hierarchical nanostructural properties play in developing an understanding of the effect of scale on the material properties (chemical, elastic and electrical) of calcified tissues as well as the interfaces that form between such tissues and biomaterials. Both nanostructural and microstructural properties will be considered starting with the size and shape of the apatitic mineralites in both young and mature bovine bone. Microstructural properties for human dentin and cortical and trabecular bone will be considered. These separate sets of data will be combined mathematically to advance the effects of scale on the modeling of these tissues and the tissue/biomaterial interfaces as hierarchical material/structural composites. Interfacial structure and properties to be considered in greatest detail will be that of the dentin/adhesive (d/a) interface, which presents a clear example of examining all three material properties, (chemical, elastic and electrical). In this case, finite element modeling (FEA) was based on the actual measured values of the structure and elastic properties of the materials comprising the d/a interface; this combination provides insight into factors and mechanisms that contribute to premature failure of dental composite fillings. At present, there are more elastic property data obtained by microstructural measurements, especially high frequency ultrasonic wave propagation (UWP) and scanning acoustic microscopy (SAM) techniques. However, atomic force microscopy (AFM) and nanoindentation (NI) of cortical and trabecular bone and the dentin-enamel junction (DEJ) among others have become available allowing correlation of the nanostructural level measurements with those made on the microstructural level.

  8. Mechanics of robust and releasable adhesion in biology: Bottom up designed hierarchical structures of gecko

    Science.gov (United States)

    Yao, Haimin; Gao, Huajian

    2006-06-01

    Gecko and many insects have evolved specialized adhesive tissues with bottom-up designed (from nanoscale and up) hierarchical structures that allow them to maneuver on vertical walls and ceilings. The adhesion mechanisms of gecko must be robust enough to function on unknown rough surfaces and also easily releasable upon animal movement. How does nature design such macroscopic sized robust and releasable adhesion devices? How can an adhesion system designed for robust attachment simultaneously allow easy detachment? These questions have motivated the present investigation on mechanics of robust and releasable adhesion in biology. On the question of robust adhesion, we introduce a fractal gecko hairs model, which assumes self-similar fibrillar structures at multiple hierarchical levels mimicking gecko's spatula ultrastructure, to show that structural hierarchy plays a key role in robust adhesion: it allows the work of adhesion to be exponentially enhanced with each added level of hierarchy. We demonstrate that, barring fiber fracture, the fractal gecko hairs can be designed from nanoscale and up to achieve flaw tolerant adhesion at any length scales. However, consideration of crack-like flaws in the hairs themselves results in an upper size limit for flaw tolerant design. On the question of releasable adhesion, we hypothesize that the asymmetrically aligned seta hairs of gecko form a strongly anisotropic material with adhesion strength strongly varying with the direction of pulling. We use analytical solutions to show that a strongly anisotropic elastic solid indeed exhibits a strongly anisotropic adhesion strength when sticking on a rough surface. Furthermore, we perform finite element calculations to show that the adhesion strength of a strongly anisotropic attachment pad exhibits essentially two levels of adhesion strength depending on the direction of pulling, resulting in an orientation-controlled switch between attachment and detachment. These findings not only

  9. Hierarchical composite structures prepared by electrophoretic deposition of carbon nanotubes onto glass fibers.

    Science.gov (United States)

    An, Qi; Rider, Andrew N; Thostenson, Erik T

    2013-03-01

    Carbon nanotube/glass fiber hierarchical composite structures have been produced using an electrophoretic deposition (EPD) approach for integrating the carbon nanotubes (CNTs) into unidirectional E-glass fabric, followed by infusion of an epoxy polymer matrix. The resulting composites show a hierarchical structure, where the structural glass fibers, which have diameters in micrometer range, are coated with CNTs having diameters around 10-20 nm. The stable aqueous dispersions of CNTs were produced using a novel ozonolysis and ultrasonication technique that results in dispersion and functionalization in a single step. Ozone-oxidized CNTs were then chemically reacted with a polyethyleneimine (PEI) dendrimer to enable cathodic EPD and promote adhesion between the CNTs and the glass-fiber substrate. Deposition onto the fabric was accomplished by placing the fabric in front of the cathode and applying a direct current (DC) field. Microscopic characterization shows the integration of CNTs throughout the thickness of the glass fabric, where individual fibers are coated with CNTs and a thin film of CNTs also forms on the fabric surfaces. Within the composite, networks of CNTs span between adjacent fibers, and the resulting composites exhibit good electrical conductivity and considerable increases in the interlaminar shear strength, relative to fiber composites without integrated CNTs. Mechanical, chemical and morphological characterization of the coated fiber surfaces reveal interface/interphase modification resulting from the coating is responsible for the improved mechanical and electrical properties. The CNT-coated glass-fiber laminates also exhibited clear changes in electrical resistance as a function of applied shear strain and enables self-sensing of the transition between elastic and plastic load regions.

  10. Active Antifogging Property of Monolayer SiO2 Film with Bioinspired Multiscale Hierarchical Pagoda Structures.

    Science.gov (United States)

    Han, Zhiwu; Mu, Zhengzhi; Li, Bo; Wang, Ze; Zhang, Junqiu; Niu, Shichao; Ren, Luquan

    2016-09-27

    Antifogging surfaces with hydrophilic or even superhydrophilic wetting behavior have received significant attention due to their ability to reduce light scattering by film-like condensation. However, a major challenge remains in achieving high-speed antifogging performance and revealing the hydrophilic-based antifogging mechanism of glass or other transparent materials under aggressive fogging conditions. Herein, with inspiration from the fog-free property of the typical Morpho menelaus terrestris butterfly (Butler, 1866) wing scales, a monolayer SiO2 film with multiscale hierarchical pagoda structures (MHPSs) based on glass substrate was designed and fabricated using an optimized biotemplate-assisted wet chemical method without any post-treatments. The biomimetic monolayer film (BMF) composed of nanoscale SiO2 3D networks displayed excellent antifogging properties, which is superior to that of the glass substrate itself. The MHPS-based BMF even kept high transmittance (∼95%) under aggressive fog conditions, and it almost instantaneously recovered to a fog-free state (properties mainly benefit from the synergistic effect of both hydrophilic chemical compositions (nanoscale SiO2) and physical structures (biomimetic MHPSs) of the BMF. High-speed active antifogging performance of the glass materials enabled the retention of a high transmittance property even in humid conditions, heralding reliable optical performance in outdoor practical applications, especially in aggressive foggy environments. More importantly, the investigations in this work offer a promising way to handily design and fabricate quasi-textured surfaces with multiscale hierarchical structures that possess high-performance physicochemical properties.

  11. The relationship between carbon dioxide emission and economic growth: Hierarchical structure methods

    Science.gov (United States)

    Deviren, Seyma Akkaya; Deviren, Bayram

    2016-06-01

    Carbon dioxide (CO2) emission has an essential role in the current debate on sustainable development and environmental protection. CO2 emission is also directly linked with use of energy which plays a focal role both for production and consumption in the world economy. Therefore the relationship between the CO2 emission and economic growth has a significant implication for the environmental and economical policies. In this study, within the scope of sociophysics, the topology, taxonomy and relationships among the 33 countries, which have almost the high CO2 emission and economic growth values, are investigated by using the hierarchical structure methods, such as the minimal spanning tree (MST) and hierarchical tree (HT), over the period of 1970-2010. The average linkage cluster analysis (ALCA) is also used to examine the cluster structure more clearly in HTs. According to their proximity, economic ties and economic growth, different clusters of countries are identified from the structural topologies of these trees. We have found that the high income & OECD countries are closely connected to each other and are isolated from the upper middle and lower middle income countries from the MSTs, which are obtained both for the CO2 emission and economic growth. Moreover, the high income & OECD clusters are homogeneous with respect to the economic activities and economic ties of the countries. It is also mentioned that the Group of Seven (G7) countries (CAN, ENG, FRA, GER, ITA, JPN, USA) are connected to each other and these countries are located at the center of the MST for the results of CO2 emission. The same analysis may also successfully apply to the other environmental sources and different countries.

  12. Hierarchical columnar silicon anode structures for high energy density lithium sulfur batteries

    Science.gov (United States)

    Piwko, Markus; Kuntze, Thomas; Winkler, Sebastian; Straach, Steffen; Härtel, Paul; Althues, Holger; Kaskel, Stefan

    2017-05-01

    Silicon is a promising anode material for next generation lithium secondary batteries. To significantly increase the energy density of state of the art batteries with silicon, new concepts have to be developed and electrode structuring will become a key technology. Structuring is essential to reduce the macroscopic and microscopic electrode deformation, caused by the volume change during cycling. We report pulsed laser structuring for the generation of hierarchical columnar silicon films with outstanding high areal capacities up to 7.5 mAh cm-2 and good capacity retention. Unstructured columnar electrodes form a micron-sized block structure during the first cycle to compensate the volume expansion leading to macroscopic electrode deformation. At increased silicon loading, without additional structuring, pronounced distortion and the formation of cracks through the current collector causes cell failure. Pulsed laser ablation instead is demonstrated to avoid macroscopic electrode deformation by initial formation of the block structure. A full cell with lithiated silicon versus a carbon-sulfur cathode is assembled with only 15% overbalanced anode and low electrolyte amount (8 μl mgsulfur-1). While the capacity retention over 50 cycles is identical to a cell with high excess lithium anode, the volumetric energy density could be increased by 30%.

  13. Hierarchical periodic micro/nano-structures on nitinol and their influence on oriented endothelialization and anti-thrombosis

    Energy Technology Data Exchange (ETDEWEB)

    Nozaki, Kosuke [Institute of Biomaterials and Bioengineering, Tokyo Medical and Dental University, 2-3-10 Kanda-Surugadai, Chiyoda, Tokyo 101-0062 (Japan); Shinonaga, Togo [Joining and Welding Research Institute, Osaka University, 11-1 Mihogaoka, Ibaraki, Osaka 567-0047 (Japan); Ebe, Noriko; Horiuchi, Naohiro; Nakamura, Miho; Tsutsumi, Yusuke; Hanawa, Takao [Institute of Biomaterials and Bioengineering, Tokyo Medical and Dental University, 2-3-10 Kanda-Surugadai, Chiyoda, Tokyo 101-0062 (Japan); Tsukamoto, Masahiro [Joining and Welding Research Institute, Osaka University, 11-1 Mihogaoka, Ibaraki, Osaka 567-0047 (Japan); Yamashita, Kimihiro [Institute of Biomaterials and Bioengineering, Tokyo Medical and Dental University, 2-3-10 Kanda-Surugadai, Chiyoda, Tokyo 101-0062 (Japan); Nagai, Akiko, E-mail: nag-bcr@tmd.ac.jp [Institute of Biomaterials and Bioengineering, Tokyo Medical and Dental University, 2-3-10 Kanda-Surugadai, Chiyoda, Tokyo 101-0062 (Japan)

    2015-12-01

    The applications of hierarchical micro/nano-structures, which possess properties of two-scale roughness, have been studied in various fields. In this study, hierarchical periodic micro/nano-structures were fabricated on nitinol, an equiatomic Ni–Ti alloy, using a femtosecond laser for the surface modification of intravascular stents. By controlling the laser fluence, two types of surfaces were developed: periodic nano- and micro/nano-structures. Evaluation of water contact angles indicated that the nano-surface was hydrophilic and the micro/nano-surface was hydrophobic. Endothelial cells aligned along the nano-structures on both surfaces, whereas platelets failed to adhere to the micro/nano-surface. Decorrelation between the responses of the two cell types and the results of water contact angle analysis were a result of the pinning effect. This is the first study to show the applicability of hierarchical periodic micro/nano-structures for surface modification of nitinol. - Highlights: • Hierarchical micro/nano-structures were created on nitinol using a femtosecond laser. • The nano-surface was hydrophilic and the micro/nano-surface was hydrophobic. • Endothelial cells aligned along the nano-structures • Platelets failed to adhere to the micro/nano-surface.

  14. Hierarchically porous Ni monolith@branch-structured NiCo2O4 for high energy density supercapacitors

    Institute of Scientific and Technical Information of China (English)

    Mengjie Xu; Rongjun Xu; Ying Zhao; Libao Chen; Boyun Huang; Weifeng Wei n

    2016-01-01

    A variety of NiCo2O4 nanostrucutures ranging from nanowire to nanoplate and branched structures were successfully prepared via a simple hydrothermal process. The experimental results show that NiCo2O4 with branched structures possesses the best overall electrochemical performance. The improvement of energy density was explored in terms of hierarchically three-dimensional (3D) metal substrates and a high specific area capacitance, and area energy density is obtained with hierarchically porous Ni monolith synthesized through a controlled combustion procedure.

  15. Hierarchically porous Ni monolith@branch-structured NiCo2O4 for high energy density supercapacitors

    Directory of Open Access Journals (Sweden)

    Mengjie Xu

    2016-06-01

    Full Text Available A variety of NiCo2O4 nanostrucutures ranging from nanowire to nanoplate and branched structures were successfully prepared via a simple hydrothermal process. The experimental results show that NiCo2O4 with branched structures possesses the best overall electrochemical performance. The improvement of energy density was explored in terms of hierarchically three-dimensional (3D metal substrates and a high specific area capacitance, and area energy density is obtained with hierarchically porous Ni monolith synthesized through a controlled combustion procedure.

  16. Multicast Address Management and Connection Control Based on Hierarchical Autonomous Structure

    Institute of Scientific and Technical Information of China (English)

    WANG Jian; ZHANG Fuyan

    1999-01-01

    Multicast capability, including multicast address and multicast routing mechanisms, at the network layeris necessary in order to reduce the bandwidth requirements of multiparty, multicast applications. Based on hierarchical autonomous structure in accordance with the self-organization topologies of Internet, the paper puts forward a multicast address management scheme that is shown to be robust and scalable. Connection control hierarchy (CCH) based on master/slave relationship and a simple efficient building algorithm of multi-point connection is also built. The paper also describes the normal operations of multicast address management andmulti-point connection controller. Through simulation experiment, HAM, CM and DDM of Multicast Address Allocation are compared. HAM integrates the merits of CM and DDM, which is efficient as a whole, robust andscalable. CCH raises the efficiency of connection control, and is highly robust, flexible and scalable.

  17. 3D Nearest Neighbour Search Using a Clustered Hierarchical Tree Structure

    DEFF Research Database (Denmark)

    Suhaibah, A.; Uznir, U.; Antón Castro, Francesc/François

    2016-01-01

    , with the immense number of urban datasets, the retrieval and analysis of nearest neighbour information and their efficiency will become more complex and crucial. In this paper, we present a technique to retrieve nearest neighbour information in 3D space using a clustered hierarchical tree structure. Based on our...... findings, the proposed approach substantially showed an improvement of response time analysis compared to existing approaches of spatial access methods in databases. The query performance was tested using a dataset consisting of 500,000 point locations building and franchising unit. The results...... of the franchise unit will be located or is the franchise unit located is at the best level for visibility purposes. One of the common used analyses used for retrieving the surrounding information is Nearest Neighbour (NN) analysis. It uses a point location and identifies the surrounding neighbours. However...

  18. Hierarchical structural control of visual properties in self-assembled photonic-plasmonic pigments

    CERN Document Server

    Koay, Natalie; Kay, Theresa M; Nerger, Bryan A; Miles-Rossouw, Malaika; Shirman, Tanya; Vu, Thy L; England, Grant; Phillips, Katherine R; Utech, Stefanie; Vogel, Nicolas; Kolle, Mathias; Aizenberg, Joanna

    2014-01-01

    We present a simple one-pot co-assembly method for the synthesis of hierarchically structured pigment particles consisting of silica inverse-opal bricks that are doped with plasmonic absorbers. We study the interplay between the plasmonic and photonic resonances and their effect on the visual appearance of macroscopic collections of photonic bricks that are distributed in randomized orientations. Manipulating the pore geometry tunes the wavelength- and angle-dependence of the scattering profile, which can be engineered to produce angle-dependent Bragg resonances that can either enhance or contrast with the color produced by the plasmonic absorber. By controlling the overall dimensions of the photonic bricks and their aspect ratios, their preferential alignment can either be encouraged or suppressed. This causes the Bragg resonance to appear either as uniform color travel in the former case or as sparse iridescent sparkle in the later case. By manipulating the surface chemistry of these photonic bricks, which ...

  19. Hierarchical structured TiO2 photoanodes for dye-sensitized solar cells.

    Science.gov (United States)

    Shih, Yen-Chen; Chu, Ann-Kuo; Huang, Wen-Yao

    2012-04-01

    A novel approach has been developed to fabricate hills-like hierarchical structured TiO2 photoanodes for dye-sensitized solar cells (DSSCs). The appropriately aggregated TiO2 clusters in the photoanode layer could cause stronger light scattering and higher dye loading that increases the efficiency of photovoltaic device. For detailed light-harvesting study, different molecular weights of polyvinyl alcohol (PVA) were used as binders for TiO2 nanoparticles (P-25 Degussa) aggregation. A series of TiO2 films with dissimilar morphology, the reflection of TiO2 films, absorbance of attached dye, amount of dye loading, and performance of fabricated DSSC devices, were measured and investigated. An optimized device had energy conversion efficiency of 4.47% having a higher dye loading and good light harvesting, achieving a 23% increase of short-circuit current J(sc) in DSSCs.

  20. Identifying rock blocks based on hierarchical rock-mass structure model

    Institute of Scientific and Technical Information of China (English)

    2009-01-01

    Rock-masses are divided into many closed blocks by deterministic and stochastic discontinuities and engineering interfaces in complex rock-mass engineering. Determining the sizes, shapes, and adjacent relations of blocks is important for stability analysis of fractured rock masses. Here we propose an algorithm for identifying spatial blocks based on a hierarchical 3D Rock-mass Structure Model (RSM). First, a model is built composed of deterministic discontinuities, engineering interfaces, and the earth’s surface, and the deterministic blocks surrounded by these interfaces are traced. Then, in each deter-ministic block, a network model of stochastic discontinuities is built and the stochastic blocks are traced. Building a unitary wire frame that connects all interfaces seamlessly is the key for our algorithm to identify the above two kinds of blocks. Using this algorithm, geometric models can be built for block theory, discrete element method, and discontinuous deformation analysis.

  1. Synthesis and properties of flexible nanocable with carbon nanotube @ polymer hierarchical structure

    Science.gov (United States)

    Ren, Junwen; Wang, Xiaoguang; Narayan Ramasubramanian, Lakshmi; Dong, Chengye; Cheng, Yonghong; Yu, Demei; Shan, Zhiwei

    2017-03-01

    A multi-functional polymer–carbon nanotube (CNT) nanocable with a hierarchical structure is fabricated by grafting poly (glycidyl methacrylate) (PGMA) from the CNT surface via activators regenerated by electron transfer atom transfer radical polymerization. Multiple CNTs are arranged in parallel in the fabricated nanocable and exhibit strong binding force with sheathing PGMA. In situ mechanical and electrical tests conducted on an individual nanocable reveal its high flexibility and excellent surface insulation, with an electrical resistance of approximately 1 GΩ. On increasing the voltage to the nanocable’s electrical breakdown point, nanoscale electrical trees are observed. Such degradation behavior is discussed in the wider context of breakdown mechanisms in polymer based CNTs.

  2. A hierarchical model for structure learning based on the physiological characteristics of neurons

    Institute of Scientific and Technical Information of China (English)

    WEI Hui

    2007-01-01

    Almost all applications of Artificial Neural Networks (ANNs) depend mainly on their memory ability.The characteristics of typical ANN models are fixed connections,with evolved weights,globalized representations,and globalized optimizations,all based on a mathematical approach.This makes those models to be deficient in robustness,efficiency of learning,capacity,anti-jamming between training sets,and correlativity of samples,etc.In this paper,we attempt to address these problems by adopting the characteristics of biological neurons in morphology and signal processing.A hierarchical neural network was designed and realized to implement structure learning and representations based on connected structures.The basic characteristics of this model are localized and random connections,field limitations of neuron fan-in and fan-out,dynamic behavior of neurons,and samples represented through different sub-circuits of neurons specialized into different response patterns.At the end of this paper,some important aspects of error correction,capacity,learning efficiency,and soundness of structural representation are analyzed theoretically.This paper has demonstrated the feasibility and advantages of structure learning and representation.This model can serve as a fundamental element of cognitive systems such as perception and associative memory.Key-words structure learning,representation,associative memory,computational neuroscience

  3. Structural system identification using degree of freedom-based reduction and hierarchical clustering algorithm

    Science.gov (United States)

    Chang, Seongmin; Baek, Sungmin; Kim, Ki-Ook; Cho, Maenghyo

    2015-06-01

    A system identification method has been proposed to validate finite element models of complex structures using measured modal data. Finite element method is used for the system identification as well as the structural analysis. In perturbation methods, the perturbed system is expressed as a combination of the baseline structure and the related perturbations. The changes in dynamic responses are applied to determine the structural modifications so that the equilibrium may be satisfied in the perturbed system. In practical applications, the dynamic measurements are carried out on a limited number of accessible nodes and associated degrees of freedom. The equilibrium equation is, in principle, expressed in terms of the measured (master, primary) and unmeasured (slave, secondary) degrees of freedom. Only the specified degrees of freedom are included in the equation formulation for identification and the unspecified degrees of freedom are eliminated through the iterative improved reduction scheme. A large number of system parameters are included as the unknown variables in the system identification of large-scaled structures. The identification problem with large number of system parameters requires a large amount of computation time and resources. In the present study, a hierarchical clustering algorithm is applied to reduce the number of system parameters effectively. Numerical examples demonstrate that the proposed method greatly improves the accuracy and efficiency in the inverse problem of identification.

  4. Estimating the Term Structure With a Semiparametric Bayesian Hierarchical Model: An Application to Corporate Bonds1

    Science.gov (United States)

    Cruz-Marcelo, Alejandro; Ensor, Katherine B.; Rosner, Gary L.

    2011-01-01

    The term structure of interest rates is used to price defaultable bonds and credit derivatives, as well as to infer the quality of bonds for risk management purposes. We introduce a model that jointly estimates term structures by means of a Bayesian hierarchical model with a prior probability model based on Dirichlet process mixtures. The modeling methodology borrows strength across term structures for purposes of estimation. The main advantage of our framework is its ability to produce reliable estimators at the company level even when there are only a few bonds per company. After describing the proposed model, we discuss an empirical application in which the term structure of 197 individual companies is estimated. The sample of 197 consists of 143 companies with only one or two bonds. In-sample and out-of-sample tests are used to quantify the improvement in accuracy that results from approximating the term structure of corporate bonds with estimators by company rather than by credit rating, the latter being a popular choice in the financial literature. A complete description of a Markov chain Monte Carlo (MCMC) scheme for the proposed model is available as Supplementary Material. PMID:21765566

  5. Structure function relationship in complex brain networks expressed by hierarchical synchronization

    Science.gov (United States)

    Zhou, Changsong; Zemanová, Lucia; Zamora-López, Gorka; Hilgetag, Claus C.; Kurths, Jürgen

    2007-06-01

    The brain is one of the most complex systems in nature, with a structured complex connectivity. Recently, large-scale corticocortical connectivities, both structural and functional, have received a great deal of research attention, especially using the approach of complex network analysis. Understanding the relationship between structural and functional connectivity is of crucial importance in neuroscience. Here we try to illuminate this relationship by studying synchronization dynamics in a realistic anatomical network of cat cortical connectivity. We model the nodes (cortical areas) by a neural mass model (population model) or by a subnetwork of interacting excitable neurons (multilevel model). We show that if the dynamics is characterized by well-defined oscillations (neural mass model and subnetworks with strong couplings), the synchronization patterns are mainly determined by the node intensity (total input strengths of a node) and the detailed network topology is rather irrelevant. On the other hand, the multilevel model with weak couplings displays more irregular, biologically plausible dynamics, and the synchronization patterns reveal a hierarchical cluster organization in the network structure. The relationship between structural and functional connectivity at different levels of synchronization is explored. Thus, the study of synchronization in a multilevel complex network model of cortex can provide insights into the relationship between network topology and functional organization of complex brain networks.

  6. Hierarchical linear modeling (HLM) of longitudinal brain structural and cognitive changes in alcohol-dependent individuals during sobriety

    DEFF Research Database (Denmark)

    Yeh, P.H.; Gazdzinski, S.; Durazzo, T.C.;

    2007-01-01

    and unique hierarchical linear models allow assessments of the complex relationships among outcome measures of longitudinal data sets. These HLM applications suggest that chronic cigarette smoking modulates the temporal dynamics of brain structural and cognitive changes in alcoholics during prolonged......Background: Hierarchical linear modeling (HLM) can reveal complex relationships between longitudinal outcome measures and their covariates under proper consideration of potentially unequal error variances. We demonstrate the application of FILM to the study of magnetic resonance imaging (MRI...... time points. Using HLM, we modeled volumetric and cognitive outcome measures as a function of cigarette and alcohol use variables. Results: Different hierarchical linear models with unique model structures are presented and discussed. The results show that smaller brain volumes at baseline predict...

  7. The history of the CATH structural classification of protein domains.

    Science.gov (United States)

    Sillitoe, Ian; Dawson, Natalie; Thornton, Janet; Orengo, Christine

    2015-12-01

    This article presents a historical review of the protein structure classification database CATH. Together with the SCOP database, CATH remains comprehensive and reasonably up-to-date with the now more than 100,000 protein structures in the PDB. We review the expansion of the CATH and SCOP resources to capture predicted domain structures in the genome sequence data and to provide information on the likely functions of proteins mediated by their constituent domains. The establishment of comprehensive function annotation resources has also meant that domain families can be functionally annotated allowing insights into functional divergence and evolution within protein families. Copyright © 2015 The Authors. Published by Elsevier B.V. All rights reserved.

  8. Direct imaging of structural domains in iron pnictides

    Science.gov (United States)

    Tanatar, Makariy

    2010-03-01

    The parent compounds of iron-arsenide superconductors undergo first order structural transition between tetragonal and orthorhombic phases at a temperature, TS. In AFe2As2 (122) compounds (A=Ca,Sr,Ba) this occurs simultaneously with magnetic transition at TM. Using a combination of polarized light microscopy and spatially-resolved high-energy synchrotron x-ray diffraction we show the orthorhombic distortion leads to the formation of 45^o-type structural domains in both 122 and 1111 single crystals. Domains penetrate through the sample thickness in the c-direction and are not affected by crystal imperfections such as growth terraces. The domains form regular stripe patterns in the plane with a characteristic dimension of 10-50 μm. In a range of low Co-doped compositions structural domains and superconductivity coexist. With the increasing doping level the domain structure becomes more intertwined and fine due to a decrease in the orthorhombic distortion. This results in an energy landscape with maze-like spatial modulations favorable for pinning and intrinsically high critical current densities in the underdoped regime. M.A.Tanatar et al. Phys. Rev. B 79, 180508 (R) (2009). R. Prozorov et al. arxiv: 0909.0923, Phys. Rev.B accepted.

  9. Ordered assembly of NiCo₂O₄ multiple hierarchical structures for high-performance pseudocapacitors.

    Science.gov (United States)

    Zhou, Qingwen; Xing, Jiachao; Gao, Yanfang; Lv, Xiaojun; He, Yongmei; Guo, Zihan; Li, Yueming

    2014-07-23

    The design and development of nanomaterials has become central to the advancement of pseudocapacitive performance. Many one-dimensional nanostructures (1D NSs), two-dimensional nanostructures (2D NSs), and three-dimensional hierarchical structures (3D HSs) composed of these building blocks have been synthesized as pseudocapacitive materials via different methods. However, due to the unclear assembly mechanism of these NSs, reports of HSs simultaneously assembled from two or more types of NSs are rare. In this article, NiCo2O4 multiple hierarchical structures (MHSs) composed of 1D nanowires and 2D nanosheets are simply grown on Ni foam using an ordered two-step hydrothermal synthesis followed by annealing processing. The low-dimensional nanowire is found to hold priority in the growth order, rather than the high-dimensional nanosheet, thus effectively promoting the integration of these different NSs in the assembly of the NiCo2O4 MHSs. With vast electroactive surface area and favorable mesoporous architecture, the NiCo2O4 MHSs exhibit a high specific capacitance of up to 2623.3 F g(-1), scaled to the active mass of the NiCo2O4 sample at a current density of 1 A g(-1). A nearly constant rate performance of 68% is achieved at a current density ranging from 1 to 40 A g(-1), and the sample retains approximately 94% of its maximum capacitance even after 3000 continuous charge-discharge cycles at a consistently high current density of 10 A g(-1).

  10. Bio-inspired hierarchical self-assembly of nanotubes into multi-dimensional and multi-scale structures

    Science.gov (United States)

    Liu, Yong; Gao, Yuan; Lu, Qinghua; Zhou, Yongfeng; Yan, Deyue

    2011-12-01

    As inspired from nature's strategy to prepare collagen, herein we report a hierarchical solution self-assembly method to prepare multi-dimensional and multi-scale supra-structures from the building blocks of pristine titanate nanotubes (TNTs) around 10 nm. With the help of amylose, the nanotubes was continuously self-assembled into helically wrapped TNTs, highly aligned fibres, large bundles, 2D crystal facets and 3D core-shell hybrid crystals. The amyloses work as the glue molecules to drive and direct the hierarchical self-assembly process extending from microscopic to macroscopic scale. The whole self-assembly process as well as the self-assembly structures were carefully characterized by the combination methods of 1H NMR, CD, Hr-SEM, AFM, Hr-TEM, SAED pattern and EDX measurements. A hierarchical self-assembly mechanism was also proposed.As inspired from nature's strategy to prepare collagen, herein we report a hierarchical solution self-assembly method to prepare multi-dimensional and multi-scale supra-structures from the building blocks of pristine titanate nanotubes (TNTs) around 10 nm. With the help of amylose, the nanotubes was continuously self-assembled into helically wrapped TNTs, highly aligned fibres, large bundles, 2D crystal facets and 3D core-shell hybrid crystals. The amyloses work as the glue molecules to drive and direct the hierarchical self-assembly process extending from microscopic to macroscopic scale. The whole self-assembly process as well as the self-assembly structures were carefully characterized by the combination methods of 1H NMR, CD, Hr-SEM, AFM, Hr-TEM, SAED pattern and EDX measurements. A hierarchical self-assembly mechanism was also proposed. Electronic supplementary information (ESI) available: Characterization of the A/TNTs and TNT crystals. See DOI: 10.1039/c1nr11151e

  11. Periodic instantons and domain structure in a ferromagnetic film

    Science.gov (United States)

    Zheng, G.-P.; Liang, J.-Q.; Nie, Y.-H.; Yin, W.

    2003-11-01

    We in this paper study periodic instantons and domain structures in a theoretical film consisting of biaxial-anisotropic ferromagnets. In a proper approximation the equation of motion of the magnetization vector as a space-time function in the film is reduced to the 1 + 2-dimensional sine-Gordon field equation in strong anisotropy limit. Static periodic instantons, which are solutions of Euclidean field equantion, and various new domain structures are obtained analytically. We also investigate the energy density and stability of the periodic instantons.

  12. Modeling Microwave Structures in Time Domain Using Laguerre Polynomials

    Directory of Open Access Journals (Sweden)

    Z. Raida

    2006-09-01

    Full Text Available The paper is focused on time domain modeling of microwave structures by the method of moments. Two alternative schemes with weighted Laguerre polynomials are presented. Thanks to their properties, these schemes are free of late time oscillations. Further, the paper is aimed to effective and accurate evaluation of Green's functions integrals within these schemes. For this evaluation, a first- and second-order polynomial approximation is developed. The last part of the paper deals with modeling microstrip structures in the time domain. Conditions of impedance matching are derived, and the proposed approach is verified by modeling a microstrip filter.

  13. From nano to macro: studying the hierarchical structure of the corneal extracellular matrix.

    Science.gov (United States)

    Quantock, Andrew J; Winkler, Moritz; Parfitt, Geraint J; Young, Robert D; Brown, Donald J; Boote, Craig; Jester, James V

    2015-04-01

    In this review, we discuss current methods for studying ocular extracellular matrix (ECM) assembly from the 'nano' to the 'macro' levels of hierarchical organization. Since collagen is the major structural protein in the eye, providing mechanical strength and controlling ocular shape, the methods presented focus on understanding the molecular assembly of collagen at the nanometre level using X-ray scattering through to the millimetre to centimetre level using non-linear optical (NLO) imaging of second harmonic generated (SHG) signals. Three-dimensional analysis of ECM structure is also discussed, including electron tomography, serial block face scanning electron microscopy (SBF-SEM) and digital image reconstruction. Techniques to detect non-collagenous structural components of the ECM are also presented, and these include immunoelectron microscopy and staining with cationic dyes. Together, these various approaches are providing new insights into the structural blueprint of the ocular ECM, and in particular that of the cornea, which impacts upon our current understanding of the control of corneal shape, pathogenic mechanisms underlying ectatic disorders of the cornea and the potential for corneal tissue engineering. Copyright © 2014 Elsevier Ltd. All rights reserved.

  14. Structural basis for Smoothened regulation by its extracellular domains

    Science.gov (United States)

    Miller, Paul S.; Hedger, George; Luchetti, Giovanni; Nachtergaele, Sigrid; Tully, Mark D.; Mydock-McGrane, Laurel; Covey, Douglas F.; Rambo, Robert P.; Sansom, Mark S. P.; Rohatgi, Rajat; Siebold, Christian

    2016-01-01

    Developmental signals of the Hedgehog (Hh) and Wnt families are transduced across the membrane by Frizzled-class G-protein coupled receptors (GPCRs) composed of both a heptahelical transmembrane domain (TMD) and an extracellular cysteine-rich domain (CRD). How such large extracellular domains of GPCRs regulate signalling by the TMD is unknown. We present crystal structures of the Hh signal transducer and oncoprotein Smoothened (SMO), which contains two distinct ligand-binding sites in its TMD and CRD. The CRD is stacked atop the TMD, separated by an intervening wedge-like linker domain (LD). Structure-guided mutations show that the interface between the CRD, LD and TMD stabilises the inactive state of SMO. Unexpectedly, we find a cholesterol molecule bound to SMO in the CRD-binding site. Mutations predicted to prevent cholesterol binding impair the ability of SMO to transmit native Hh signals. Binding of a clinically used antagonist, vismodegib, to the TMD induces a conformational change that is propagated to the CRD, resulting in loss of cholesterol from the CRD-LD-TMD interface. Our work elucidates the structural mechanism by which the activity of a GPCR is controlled by ligand-regulated interactions between its extracellular and transmembrane domains. PMID:27437577

  15. Fabrication of hierarchical structures for stable superhydrophobicity on metallic planar and cylindrical inner surfaces

    Science.gov (United States)

    Hao, Xiuqing; Wang, Li; Lv, Danhui; Wang, Quandai; Li, Liang; He, Ning; Lu, Bingheng

    2015-01-01

    Recently, the construction of stable superhydrophobicity on metallic wetting surfaces has gained increasing attention due to its potential wide applications. In this paper, we propose an economic fabricating method, which not only is suitable for metallic planar surfaces, but also could be applied onto cylindrical inner surfaces. It mainly involves two steps: etching micro-concaves by a movable mask electrochemical micromachining (EMM) technique and fabricating nanopillars of ZnO by a hydrothermal method. Then the influences of surface morphology on the static and dynamic behaviors of water droplets are investigated. The energy loss during impact on the surfaces is quantified in terms of the restitution coefficient for droplets bouncing off the surfaces. For hierarchical structures with excellent superhydrophobicity (contact angle ≈180° and sliding angle ≤1°), the droplet bounces off the surface several times, superior to the droplet's response on single nanopillars (contact angle ≈165.8° and sliding angle ≈6.29°) where droplet bounces off only for limited a number of times, and even far better than the dynamics of a liquid droplet impinging on microstructures (contact angle ≈132.1° and sliding angle >90°) where droplet does not rebound and remains pinned. The highest elasticity is obtained on the hierarchical surface, where the restitution coefficient can be as large as 0.94. The fabricating method is then applied onto the cylindrical inner surface and the wetting behavior is confirmed to be consistent with the planar surface. This method, which can be generalized to any kind of solid electroconductive metal or other surfaces with different shapes, could find wide practical applications in self-cleaning surfaces, chemical industry, microfluidic devices, mechanical engineering and aviation.

  16. Structural insight into CIDE domains: the Janus face of CIDEs.

    Science.gov (United States)

    Park, Hyun Ho

    2015-02-01

    Cell-death inducing DFF45-like effect domain (CIDE domain) is a protein interaction module that was initially found in DNA fragmentation factor (DFF) proteins DFF40 and DFF45. Several other CIDE-containing proteins, CIDE-A, CIDE-B, and CIDE-3, have since been identified in humans. Although the main function of these proteins is associated with apoptosis, recent studies have identified roles of CIDE-containing proteins in energy metabolism, especially involvement in control of the size of lipid droplets. Because CIDE-containing proteins perform critical tasks in apoptosis and energy metabolism and have been linked to many human diseases including cancer and obesity, studies of CIDE domains and CIDE-containing proteins are of great biological importance. This review summarizes the structural insight into CIDE and the CIDE-CIDE complex and speculates on a generalized strategy for the CIDE-CIDE interaction based on the available CIDE structures and molecular modelling.

  17. Crystal Structure of the Marburg Virus VP35 Oligomerization Domain.

    Science.gov (United States)

    Bruhn, Jessica F; Kirchdoerfer, Robert N; Urata, Sarah M; Li, Sheng; Tickle, Ian J; Bricogne, Gérard; Saphire, Erica Ollmann

    2017-01-15

    Marburg virus (MARV) is a highly pathogenic filovirus that is classified in a genus distinct from that of Ebola virus (EBOV) (genera Marburgvirus and Ebolavirus, respectively). Both viruses produce a multifunctional protein termed VP35, which acts as a polymerase cofactor, a viral protein chaperone, and an antagonist of the innate immune response. VP35 contains a central oligomerization domain with a predicted coiled-coil motif. This domain has been shown to be essential for RNA polymerase function. Here we present crystal structures of the MARV VP35 oligomerization domain. These structures and accompanying biophysical characterization suggest that MARV VP35 is a trimer. In contrast, EBOV VP35 is likely a tetramer in solution. Differences in the oligomeric state of this protein may explain mechanistic differences in replication and immune evasion observed for MARV and EBOV.

  18. Biomolecule-Assisted Hydrothermal Synthesis and Self-Assembly of Bi2Te3 Nanostring-Cluster Hierarchical Structure

    DEFF Research Database (Denmark)

    Mi, Jianli; Lock, Nina; Sun, Ting;

    2010-01-01

    A simple biomolecule-assisted hydrothermal approach has been developed for the fabrication of Bi2Te3 thermoelectric nanomaterials. The product has a nanostring-cluster hierarchical structure which is composed of ordered and aligned platelet-like crystals. The platelets are100 nm in diameter...

  19. Synthesis of a hierarchically structured zeolite-templated carbon starting from fly ash-derived zeolite X

    CSIR Research Space (South Africa)

    Musyoka, Nicholas M

    2014-05-01

    Full Text Available the same morphological features as the parent zeolite and was composed of more than 96% carbon which confirmed that the zeolite template was successfully removed. It is important to emphasize that the hierarchically structured zeolite was produced without...

  20. Self-templated synthesis of TiO2 hierarchical structure photocatalyst with high efficiency and good sedimentation property

    Science.gov (United States)

    Wang, Xiaoning; Sang, Yuanhua; Yu, Xin; Liu, Baishan; Liu, Hong

    2016-10-01

    The balance between highly efficient photocatalysis and a good emulsion/water extraction property is crucial for the practical application of TiO2 photocatalysts. The TiO2 hierarchical structure was synthesized via a hydrothermal treatment of H2Ti3O7 nanobelts with TiF4. The hydrolysis of TiF4 supplies the TiO2 nucleus, and HF, which is derived from the hydrolysis process, acts as a corrosive to etch the H2Ti3O7 nanobelt, resulting in a dynamic dissolution and precipitation process. The etching process resulted in self-generated TiF4 and initiated hydrolysis to generate new TiO2 primary particles. Induced by F etching process, Ti3+ defects were formed in the hierarchical structures, which was beneficial to the photocatalytic property. This hydrolysis-etching-hydrolysis process allows for template dissolution and self-assembly of anatase TiO2 nanobelts to form the TiO2 hierarchical structures. This process balances the nanominiaturization and sedimentation property requirements by the photocatalytic and emulsion/water extraction properties. This simple hydrolysis-etching-hydrolysis process can be applied to the synthesis of many other hierarchical structures.

  1. Synthesis and Visible-Light Photocatalytic Property of Bi2WO6Hierarchical Octahedron-Like Structures

    Directory of Open Access Journals (Sweden)

    Li Yuanyuan

    2008-01-01

    Full Text Available Abstract A novel octahedron-like hierarchical structure of Bi2WO6has been fabricated by a facile hydrothermal method in high quantity. XRD, SEM, TEM, and HRTEM were used to characterize the product. The results indicated that this kind of Bi2WO6crystals had an average size of ~4 μm, constructed by quasi-square single-crystal nanosheets assembled in a special fashion. The formation of octahedron-like hierarchical structure of Bi2WO6depended crucially on the pH value of the precursor suspensions. The photocatalytic activity of the hierarchical Bi2WO6structures toward RhB degradation under visible light was investigated, and it was found to be significantly better than that of the sample fabricated by SSR. The better photocatalytic property should be strongly associated with the high specific surface area and the abundant pore structure of the hierarchical octahedron-like Bi2WO6.

  2. The Impact of Adjacent-Dependencies and Staged-Input on the Learnability of Center-Embedded Hierarchical Structures

    Science.gov (United States)

    Lai, Jun; Poletiek, Fenna H.

    2011-01-01

    A theoretical debate in artificial grammar learning (AGL) regards the learnability of hierarchical structures. Recent studies using an A[superscript n]B[superscript n] grammar draw conflicting conclusions ([Bahlmann and Friederici, 2006] and [De Vries et al., 2008]). We argue that 2 conditions crucially affect learning A[superscript…

  3. Control Strategies for Islanded Microgrid using Enhanced Hierarchical Control Structure with Multiple Current-Loop Damping Schemes

    DEFF Research Database (Denmark)

    Han, Yang; Shen, Pan; Zhao, Xin

    2017-01-01

    In this paper, the modeling, controller design, and stability analysis of the islanded microgrid (MG) using enhanced hierarchical control structure with multiple current loop damping schemes is proposed. The islanded MG is consisted of the parallel-connected voltage source inverters using LCL...

  4. Predicting allergic contact dermatitis: a hierarchical structure activity relationship (SAR) approach to chemical classification using topological and quantum chemical descriptors

    Science.gov (United States)

    Basak, Subhash C.; Mills, Denise; Hawkins, Douglas M.

    2008-06-01

    A hierarchical classification study was carried out based on a set of 70 chemicals—35 which produce allergic contact dermatitis (ACD) and 35 which do not. This approach was implemented using a regular ridge regression computer code, followed by conversion of regression output to binary data values. The hierarchical descriptor classes used in the modeling include topostructural (TS), topochemical (TC), and quantum chemical (QC), all of which are based solely on chemical structure. The concordance, sensitivity, and specificity are reported. The model based on the TC descriptors was found to be the best, while the TS model was extremely poor.

  5. Direct hierarchical assembly of nanoparticles

    Science.gov (United States)

    Xu, Ting; Zhao, Yue; Thorkelsson, Kari

    2014-07-22

    The present invention provides hierarchical assemblies of a block copolymer, a bifunctional linking compound and a nanoparticle. The block copolymers form one micro-domain and the nanoparticles another micro-domain.

  6. Superior supercapacitive performance of hollow activated carbon nanomesh with hierarchical structure derived from poplar catkins

    Science.gov (United States)

    Su, Xiao-Li; Cheng, Ming-Yu; Fu, Lin; Yang, Jing-He; Zheng, Xiu-Cheng; Guan, Xin-Xin

    2017-09-01

    The hollow activated carbon nanomesh (PCACM) with a hierarchical porous structure is derived from biowaste-poplar catkins by in-situ calcination etching with Ni(NO3)2·6H2O and KOH in N2 flow combined with an acid dissolution technique. This procedure not only inherits the natural tube morphology of poplar catkins, but also generates a fascinating nanomesh structure on the walls. PCACM possesses a large specific surface area (SBET = 1893.0 m2 g-1) and high total pore volume (Vp = 1.495 cm3 g-1), and displays an exciting meso-macoporous structure with a concentrated pore size distribution of 4.53 nm. The specific capacitance of PCACM is as high as 314.6 F g-1 at 1.0 A g-1 when used as the electrode materials for supercapacitor. Furthermore, the symmetric supercapacitor of PCACM with 1.0 M Na2SO4 solution as the electrolyte displays a high energy density of 20.86 Wh kg-1 at a power density of 180.13 W kg-1 within a wide voltage rage of 0-1.8 V, which is comparable or even obviously higher than those of other biomass derived carbon reported. It is noteworthy that PCACM also exhibits superior cycling stability and coulombic efficiency. The excellent electrochemical behaviors enable PCACM to be a promising electrode material for supercapacitors.

  7. Detecting a hierarchical genetic population structure via Multi-InDel markers on the X chromosome

    Science.gov (United States)

    Fan, Guang Yao; Ye, Yi; Hou, Yi Ping

    2016-01-01

    Detecting population structure and estimating individual biogeographical ancestry are very important in population genetics studies, biomedical research and forensics. Single-nucleotide polymorphism (SNP) has long been considered to be a primary ancestry-informative marker (AIM), but it is constrained by complex and time-consuming genotyping protocols. Following up on our previous study, we propose that a multi-insertion-deletion polymorphism (Multi-InDel) with multiple haplotypes can be useful in ancestry inference and hierarchical genetic population structures. A validation study for the X chromosome Multi-InDel marker (X-Multi-InDel) as a novel AIM was conducted. Genetic polymorphisms and genetic distances among three Chinese populations and 14 worldwide populations obtained from the 1000 Genomes database were analyzed. A Bayesian clustering method (STRUCTURE) was used to discern the continental origins of Europe, East Asia, and Africa. A minimal panel of ten X-Multi-InDels was verified to be sufficient to distinguish human ancestries from three major continental regions with nearly the same efficiency of the earlier panel with 21 insertion-deletion AIMs. Along with the development of more X-Multi-InDels, an approach using this novel marker has the potential for broad applicability as a cost-effective tool toward more accurate determinations of individual biogeographical ancestry and population stratification. PMID:27535707

  8. Zipf's law, Hierarchical Structure, and Shuffling-Cards Model for Urban Development

    CERN Document Server

    Chen, Yanguang

    2011-01-01

    A new angle of view is proposed to find the simple rules dominating complex systems and regular patterns behind random phenomena such as cities. Hierarchy of cities reflects the ubiquitous structure frequently observed in the natural world and social institutions. Where there is a hierarchy with cascade structure, there is a rank-size distribution following Zipf's law, and vice versa. The hierarchical structure can be described with a set of exponential functions that are identical in form to Horton-Strahler's laws on rivers and Gutenberg-Richter's laws on earthquake energy. From the exponential models, we can derive four power laws such as Zipf's law indicative of fractals and scaling symmetry. Research on the hierarchy is revealing for us to understand how complex systems are self-organized. A card-shuffling model is built to interpret the relation between Zipf's law and hierarchy of cities. This model can be expanded to explain the general empirical power-law distributions across the individual physical an...

  9. Hierarchical progressive surveys. Multi-resolution HEALPix data structures for astronomical images, catalogues, and 3-dimensional data cubes

    CERN Document Server

    Fernique, P; Boch, T; Oberto, A; Pineau, F-X; Durand, D; Bot, C; Cambresy, L; Derriere, S; Genova, F; Bonnarel, F

    2015-01-01

    Scientific exploitation of the ever increasing volumes of astronomical data requires efficient and practical methods for data access, visualisation, and analysis. Hierarchical sky tessellation techniques enable a multi-resolution approach to organising data on angular scales from the full sky down to the individual image pixels. Aims. We aim to show that the Hierarchical progressive survey (HiPS) scheme for describing astronomical images, source catalogues, and three-dimensional data cubes is a practical solution to managing large volumes of heterogeneous data and that it enables a new level of scientific interoperability across large collections of data of these different data types. Methods. HiPS uses the HEALPix tessellation of the sphere to define a hierarchical tile and pixel structure to describe and organise astronomical data. HiPS is designed to conserve the scientific properties of the data alongside both visualisation considerations and emphasis on the ease of implementation. We describe the develop...

  10. Hierarchical mixture of experts and diagnostic modeling approach to reduce hydrologic model structural uncertainty: STRUCTURAL UNCERTAINTY DIAGNOSTICS

    Energy Technology Data Exchange (ETDEWEB)

    Moges, Edom [Civil and Environmental Engineering Department, Washington State University, Richland Washington USA; Demissie, Yonas [Civil and Environmental Engineering Department, Washington State University, Richland Washington USA; Li, Hong-Yi [Hydrology Group, Pacific Northwest National Laboratory, Richland Washington USA

    2016-04-01

    In most water resources applications, a single model structure might be inadequate to capture the dynamic multi-scale interactions among different hydrological processes. Calibrating single models for dynamic catchments, where multiple dominant processes exist, can result in displacement of errors from structure to parameters, which in turn leads to over-correction and biased predictions. An alternative to a single model structure is to develop local expert structures that are effective in representing the dominant components of the hydrologic process and adaptively integrate them based on an indicator variable. In this study, the Hierarchical Mixture of Experts (HME) framework is applied to integrate expert model structures representing the different components of the hydrologic process. Various signature diagnostic analyses are used to assess the presence of multiple dominant processes and the adequacy of a single model, as well as to identify the structures of the expert models. The approaches are applied for two distinct catchments, the Guadalupe River (Texas) and the French Broad River (North Carolina) from the Model Parameter Estimation Experiment (MOPEX), using different structures of the HBV model. The results show that the HME approach has a better performance over the single model for the Guadalupe catchment, where multiple dominant processes are witnessed through diagnostic measures. Whereas, the diagnostics and aggregated performance measures prove that French Broad has a homogeneous catchment response, making the single model adequate to capture the response.

  11. DOG 1.0: illustrator of protein domain structures

    Institute of Scientific and Technical Information of China (English)

    Jian Ren; Longping Wen; Xinjiao Gao; Changjiang Jin; Yu Xue; Xuebiao Yao

    2009-01-01

    @@ Dear Editor, A good picture is worth a thousand words. Schematic diagram of protein domain structures with functional motifs/sites in a concise and illustrative drawing is greatly helpful for a broad readership to grasp the old and novel functions of proteins rapidly.

  12. Groupoid structure of Toeplitz algebra over L-shaped domain

    Institute of Scientific and Technical Information of China (English)

    严绍宗; 陈晓漫; 徐胜芝

    1997-01-01

    The structure of the groupoid G associated with the Toeplitz C* -algebra C*(Ω) of the L-shaped domain is discussed. The detailed characterization of M∞ by the classification of the closed subgroup of the Euclidean space is presented.

  13. Structural Time Domain Identification (STDI) Toolbox for Use with MATLAB

    DEFF Research Database (Denmark)

    Kirkegaard, Poul Henning; Andersen, P.; Brincker, Rune

    The Structural Time Domain Identification (STDI) toolbox for use with MATLABTM is developed at Aalborg University, Denmark, based on the system identification research performed during recent years. By now, a reliable set of functions offers a wide spectrum of services for all the important steps...

  14. Structural Time Domain Identification (STDI) Toolbox for Use with MATLAB

    DEFF Research Database (Denmark)

    Kirkegaard, Poul Henning; Andersen, P.; Brincker, Rune

    1997-01-01

    The Structural Time Domain Identification (STDI) toolbox for use with MATLABTM is developed at Aalborg University, Denmark, based on the system identification research performed during recent years. By now, a reliable set of functions offers a wide spectrum of services for all the important steps...

  15. Hierarchical QSAR technology based on the Simplex representation of molecular structure.

    Science.gov (United States)

    Kuz'min, V E; Artemenko, A G; Muratov, E N

    2008-01-01

    This article is about the hierarchical quantitative structure-activity relationship technology (HiT QSAR) based on the Simplex representation of molecular structure (SiRMS) and its application for different QSAR/QSP(property)R tasks. The essence of this technology is a sequential solution (with the use of the information obtained on the previous steps) to the QSAR problem by the series of enhanced models of molecular structure description [from one dimensional (1D) to four dimensional (4D)]. It is a system of permanently improved solutions. In the SiRMS approach, every molecule is represented as a system of different simplexes (tetratomic fragments with fixed composition, structure, chirality and symmetry). The level of simplex descriptors detailing increases consecutively from the 1D to 4D representation of the molecular structure. The advantages of the approach reported here are the absence of "molecular alignment" problems, consideration of different physical-chemical properties of atoms (e.g. charge, lipophilicity, etc.), the high adequacy and good interpretability of obtained models and clear ways for molecular design. The efficiency of the HiT QSAR approach is demonstrated by comparing it with the most popular modern QSAR approaches on two representative examination sets. The examples of successful application of the HiT QSAR for various QSAR/QSPR investigations on the different levels (1D-4D) of the molecular structure description are also highlighted. The reliability of developed QSAR models as predictive virtual screening tools and their ability to serve as the base of directed drug design was validated by subsequent synthetic and biological experiments, among others. The HiT QSAR is realized as a complex of computer programs known as HIT QSAR: software that also includes a powerful statistical block and a number of useful utilities.

  16. Preparation and performance of tubular nanoflaky (Ni, Co, Mn) oxides with hierarchical mesoporous structure

    Energy Technology Data Exchange (ETDEWEB)

    Wang, Hao; Fu, Yanqing; Wang, Xianyou, E-mail: wxianyou@yahoo.com; Gao, Jiao; Zhang, Youwei; Zhao, Qinglan

    2015-08-05

    Highlights: • The nickel cobalt manganese oxide with nanosheet-like nanotube structure is firstly reported. • The novel composite possess high specific surface area of 134.1 m{sup 2} g{sup −1}. • The novel composite deliver superior electrochemical behaviors. - Abstract: The nickel cobalt manganese oxide (NCMO/CNT) with hierarchical tubular nanoflaky structure is intentionally designed and synthesized via a facile method by using carbon nanotube (CNT) as a backbone template, then the nickel cobalt manganese oxide with nanosheet-like nanotube structure (NCMONST) is synthesized after removed successfully the CNT templates. The morphology, structure and physicochemical properties of the NCMONST samples are characterized by field-emission scanning electron microscopy (FESEM), transmission electron microscopy (TEM), X-ray diffraction (XRD) and nitrogen adsorption–desorption isotherms. The results reveal that the NCMO shell with a thickness of 0.2 μm grows uniformly on the surface of the CNT with a diameter of 0.1 μm. After calcined NCMO/CNT in air, the mesoporous NCMONST is successfully obtained. The as-prepared NCMONST maintains the tubular and sheets-like structure of NCMO/CNT, and possesses a high specific surface area of 134.1 m{sup 2} g{sup −1}, large pore volume of 0.609 cm{sup 3} g{sup −1} and broad pore-size distribution. The electrochemical results show that the NCMONST exhibits a high specific capacitance of 680 F g{sup −1} at 1 A g{sup −1}, excellent rate capability of 38% at 20 A g{sup −1} and good capacity retention of 88% after 1000 cycles. Therefore, the transition metal oxide with porous structure is a promising electrode candidate for the application of supercapacitors.

  17. Hierarchical QSAR technology based on the Simplex representation of molecular structure

    Science.gov (United States)

    Kuz'min, V. E.; Artemenko, A. G.; Muratov, E. N.

    2008-06-01

    This article is about the hierarchical quantitative structure-activity relationship technology (HiT QSAR) based on the Simplex representation of molecular structure (SiRMS) and its application for different QSAR/QSP(property)R tasks. The essence of this technology is a sequential solution (with the use of the information obtained on the previous steps) to the QSAR problem by the series of enhanced models of molecular structure description [from one dimensional (1D) to four dimensional (4D)]. It is a system of permanently improved solutions. In the SiRMS approach, every molecule is represented as a system of different simplexes (tetratomic fragments with fixed composition, structure, chirality and symmetry). The level of simplex descriptors detailing increases consecutively from the 1D to 4D representation of the molecular structure. The advantages of the approach reported here are the absence of "molecular alignment" problems, consideration of different physical-chemical properties of atoms (e.g. charge, lipophilicity, etc.), the high adequacy and good interpretability of obtained models and clear ways for molecular design. The efficiency of the HiT QSAR approach is demonstrated by comparing it with the most popular modern QSAR approaches on two representative examination sets. The examples of successful application of the HiT QSAR for various QSAR/QSPR investigations on the different levels (1D-4D) of the molecular structure description are also highlighted. The reliability of developed QSAR models as predictive virtual screening tools and their ability to serve as the base of directed drug design was validated by subsequent synthetic and biological experiments, among others. The HiT QSAR is realized as a complex of computer programs known as HiT QSAR software that also includes a powerful statistical block and a number of useful utilities.

  18. Hierarchical alteration of brain structural and functional networks in female migraine sufferers.

    Directory of Open Access Journals (Sweden)

    Jixin Liu

    Full Text Available BACKGROUND: Little is known about the changes of brain structural and functional connectivity networks underlying the pathophysiology in migraine. We aimed to investigate how the cortical network reorganization is altered by frequent cortical overstimulation associated with migraine. METHODOLOGY/PRINCIPAL FINDINGS: Gray matter volumes and resting-state functional magnetic resonance imaging signal correlations were employed to construct structural and functional networks between brain regions in 43 female patients with migraine (PM and 43 gender-matched healthy controls (HC by using graph theory-based approaches. Compared with the HC group, the patients showed abnormal global topology in both structural and functional networks, characterized by higher mean clustering coefficients without significant change in the shortest absolute path length, which indicated that the PM lost optimal topological organization in their cortical networks. Brain hubs related to pain-processing revealed abnormal nodal centrality in both structural and functional networks, including the precentral gyrus, orbital part of the inferior frontal gyrus, parahippocampal gyrus, anterior cingulate gyrus, thalamus, temporal pole of the middle temporal gyrus and the inferior parietal gyrus. Negative correlations were found between migraine duration and regions with abnormal centrality. Furthermore, the dysfunctional connections in patients' cortical networks formed into a connected component and three dysregulated modules were identified involving pain-related information processing and motion-processing visual networks. CONCLUSIONS: Our results may reflect brain alteration dynamics resulting from migraine and suggest that long-term and high-frequency headache attacks may cause both structural and functional connectivity network reorganization. The disrupted information exchange between brain areas in migraine may be reshaped into a hierarchical modular structure progressively.

  19. ASH structure alignment package: Sensitivity and selectivity in domain classification

    Directory of Open Access Journals (Sweden)

    Toh Hiroyuki

    2007-04-01

    Full Text Available Abstract Background Structure alignment methods offer the possibility of measuring distant evolutionary relationships between proteins that are not visible by sequence-based analysis. However, the question of how structural differences and similarities ought to be quantified in this regard remains open. In this study we construct a training set of sequence-unique CATH and SCOP domains, from which we develop a scoring function that can reliably identify domains with the same CATH topology and SCOP fold classification. The score is implemented in the ASH structure alignment package, for which the source code and a web service are freely available from the PDBj website http://www.pdbj.org/ASH/. Results The new ASH score shows increased selectivity and sensitivity compared with values reported for several popular programs using the same test set of 4,298,905 structure pairs, yielding an area of .96 under the receiver operating characteristic (ROC curve. In addition, weak sequence homologies between similar domains are revealed that could not be detected by BLAST sequence alignment. Also, a subset of domain pairs is identified that exhibit high similarity, even though their CATH and SCOP classification differs. Finally, we show that the ranking of alignment programs based solely on geometric measures depends on the choice of the quality measure. Conclusion ASH shows high selectivity and sensitivity with regard to domain classification, an important step in defining distantly related protein sequence families. Moreover, the CPU cost per alignment is competitive with the fastest programs, making ASH a practical option for large-scale structure classification studies.

  20. Hydrothermal Synthesis Au-Bi2Te3 Nanocomposite Thermoelectric Film with a Hierarchical Sub-Micron Antireflection Quasi-Periodic Structure

    Directory of Open Access Journals (Sweden)

    Junlong Tian

    2015-06-01

    Full Text Available In this work, Au-Bi2Te3 nanocomposite thermoelectric film with a hierarchical sub-micron antireflection quasi-periodic structure was synthesized via a low-temperature chemical route using Troides helena (Linnaeus forewing (T_FW as the biomimetic template. This method combines chemosynthesis with biomimetic techniques, without the requirement of expensive equipment and energy intensive processes. The microstructure and the morphology of the Au-Bi2Te3 nanocomposite thermoelectric film was analyzed by X-ray diffraction (XRD, field-emission scanning-electron microscopy (FESEM, and transmission electron microscopy (TEM. Coupled the plasmon resonances of the Au nanoparticles with the hierarchical sub-micron antireflection quasi-periodic structure, the Au-Bi2Te3 nanocomposite thermoelectric film possesses an effective infrared absorption and infrared photothermal conversion performance. Based on the finite difference time domain method and the Joule effect, the heat generation and the heat source density distribution of the Au-Bi2Te3 nanocomposite thermoelectric film were studied. The heterogeneity of heat source density distribution of the Au-Bi2Te3 nanocomposite thermoelectric film opens up a novel promising technique for generating thermoelectric power under illumination.

  1. Durable polyorganosiloxane superhydrophobic films with a hierarchical structure by sol-gel and heat treatment method

    Science.gov (United States)

    Jiang, Zhenlin; Fang, Shuying; Wang, Chaosheng; Wang, Huaping; Ji, Chengchang

    2016-12-01

    For a surface to be superhydrophobic a combination of surface roughness and low surface energy is required. In this study, polyorganosiloxane superhydrophobic surfaces were fabricated using a sol-gel and heat treatment process followed by coating with a nanosilica (SiO2) sol and organosiloxane 1, 1, 1, 3, 5, 5, 5-heptamethyl-3-[2-(trimethoxysilyl)ethyl]-trisiloxane (β-HPEOs). The nano-structure was superimposed using self-assembled, surface-modified silica nanoparticles, forming two-dimensional hierarchical structures. The water contact angle (WCA) of polyorganosiloxane superhydrophobic surface was 143.7 ± 0.6°, which was further increased to 156.7 ± 1.1° with water angle hysteresis of 2.5 ± 0.6° by superimposing nanoparticles using a heat treatment process. An analytical characterization of the surface revealed that the nano-silica and polyorganosiloxane formed a micro/nano structure on the films and the wetting behaviour of the films changed from hydrophilic to superhydrophobic. The WCA of these films were 143.7 ± 0.6° and at heat treatment temperatures of less than 400 °C, the WCA increased from 144.5 ± 0.7° to 156.7 ± 1.1°. The prepared superhydrophobic films were stable even after heat treatment at 430 °C for 30 min and their superhydrophobicity was durable for more than 120 days. The effects of heat treatment process on the surface chemistry structure, wettability and morphology of the polyorganosiloxane superhydrophobic films were investigated in detail. The results indicated that the stability of the chemical structure was required to yield a thermally-stable superhydrophobic surface.

  2. GISAXS/GIXRD View of ZnO Films with Hierarchical Structural Elements

    Directory of Open Access Journals (Sweden)

    M. Lučić Lavčević

    2012-01-01

    Full Text Available ZnO films constituted of porous sheet-like structures, formed by calcination of precursor, were examined using scanning electron microscopy and simultaneous small-angle scattering and diffraction of the synchrotron-sourced X-rays, under the grazing-incidence conditions. The presented analysis enabled insight into the complexity of the film morphology, which revealed substrate sensitivity on the microscopic and nanoscopic length scales. The average size and spatial arrangement of nanoparticles, single-crystal domains, and the average size and features of nanopores in sheet-like structures were determined for films deposited on glass, polycrystalline ZnO layer, and silicon.

  3. Structure of the first PDZ domain of human PSD-93

    DEFF Research Database (Denmark)

    Fiorentini, Monica; Nielsen, Ann Kallehauge; Kristensen, Ole

    2009-01-01

    The crystal structure of the PDZ1 domain of human PSD-93 has been determined to 2.0 A resolution. The PDZ1 domain forms a crystallographic trimer that is also predicted to be stable in solution. The main contributions to the stabilization of the trimer seem to arise from interactions involving th...... as well as of the closely related human PSD-95 PDZ1 shows that they are very similar in terms of amino-acid composition. However, the cleft is significantly narrower in PSD-95. This could be part of the basis of peptide selectivity between PSD-93 PDZ1 and PSD-95 PDZ1....

  4. Hierarchical fiber-optic delamination detection system for carbon fiber reinforced plastic structures

    Science.gov (United States)

    Minakuchi, Shu; Banshoya, Hidehiko; Shingo, Ii; Takeda, Nobuo

    2012-10-01

    This study develops a delamination detection system by extending our previous approach for monitoring surface cracks in a large-scale composite structure. In the new system, numerous thin glass capillaries are embedded into a composite structure, and internal pressure in the built-in capillary sensors, based on comparative vacuum monitoring (CVM), is maintained as a vacuum. When delamination is induced, the capillary sensors located within the delaminated area are breached, and atmospheric air flows into the capillaries. The consequent pressure change within the capillaries is then converted into axial strain in a surface-mounted optical fiber through a transducing mechanism, which is connected to the capillaries. By monitoring the strain distribution along the optical fiber, it is possible to identify a transducing mechanism in which the pressure change occurred and thus to specify the location of the delamination. This study begins by establishing a novel sensor embedding/extracting method. The airflow characteristic in the capillary sensors is then comprehensively evaluated, determining the basic performance of the new system. The proposed detection technique is validated by taking a step-by-step approach, and finally the hierarchical fiber-optic delamination detection system is demonstrated. A further advance to be combined with a self-healing concept is also discussed.

  5. Nonparametric identification of structural modifications in Laplace domain

    Science.gov (United States)

    Suwała, G.; Jankowski, Ł.

    2017-02-01

    This paper proposes and experimentally verifies a Laplace-domain method for identification of structural modifications, which (1) unlike time-domain formulations, allows the identification to be focused on these parts of the frequency spectrum that have a high signal-to-noise ratio, and (2) unlike frequency-domain formulations, decreases the influence of numerical artifacts related to the particular choice of the FFT exponential window decay. In comparison to the time-domain approach proposed earlier, advantages of the proposed method are smaller computational cost and higher accuracy, which leads to reliable performance in more difficult identification cases. Analytical formulas for the first- and second-order sensitivity analysis are derived. The approach is based on a reduced nonparametric model, which has the form of a set of selected structural impulse responses. Such a model can be collected purely experimentally, which obviates the need for design and laborious updating of a parametric model, such as a finite element model. The approach is verified experimentally using a 26-node lab 3D truss structure and 30 identification cases of a single mass modification or two concurrent mass modifications.

  6. Superhydrophobic hierarchical structures produced through novel low-cost stamp fabrication and hot embossing of thermoplastic film

    Energy Technology Data Exchange (ETDEWEB)

    Lim, Chae Hee; Han, Sol Yi; Kim, Kwang; Kim, Wook Bae [Korea Polytechnic University, Siheung (Korea, Republic of); Eo, Jae Dong [SNDENG Co., Ltd., Ansan (Korea, Republic of)

    2015-11-15

    We present a simple and cost-effective method to produce super hydrophobic surfaces in thermoplastic polymer substrates, which contain hierarchical micro/nano structures that resemble lotus leaves. The method involved the fabrication of an Al stamp through the sequential application of laser ablation and anodization to create micro- and nano-structures, respectively. The fabricated patterns on the Al stamp were replicated on the thermoplastic Cyclic olefin copolymer (COC) film surfaces through a hot embossing technique. Static water contact angles were measured to evaluate the hydrophobicity of the patterned COC surfaces. The static water contact angle on the micro/nano hierarchical structured COC surface was measured to be 162.3 .deg. on average. The hot embossing process was repeated 31 times with a nano-structured Al stamp, and the replicated COC surfaces showed consistent water contact angles.

  7. Insights into the hierarchical structure and digestion rate of alkali-modulated starches with different amylose contents.

    Science.gov (United States)

    Qiao, Dongling; Yu, Long; Liu, Hongsheng; Zou, Wei; Xie, Fengwei; Simon, George; Petinakis, Eustathios; Shen, Zhiqi; Chen, Ling

    2016-06-25

    Combined analytical techniques were used to explore the effects of alkali treatment on the multi-scale structure and digestion behavior of starches with different amylose/amylopectin ratios. Alkali treatment disrupted the amorphous matrix, and partial lamellae and crystallites, which weakened starch molecular packing and eventually enhanced the susceptibility of starch to alkali. Stronger alkali treatment (0.5% w/w) made this effect more prominent and even transformed the dual-phase digestion of starch into a triple-phase pattern. Compared with high-amylose starch, regular maize starch, which possesses some unique structure characteristics typically as pores and crystallite weak points, showed evident changes of hierarchical structure and in digestion rate. Thus, alkali treatment has been demonstrated as a simple method to modulate starch hierarchical structure and thus to realize the rational development of starch-based food products with desired digestibility.

  8. Structural features of the regulatory ACT domain of phenylalanine hydroxylase.

    Directory of Open Access Journals (Sweden)

    Carla Carluccio

    Full Text Available Phenylalanine hydroxylase (PAH catalyzes the conversion of L-Phe to L-Tyr. Defects in PAH activity, caused by mutations in the human gene, result in the autosomal recessively inherited disease hyperphenylalaninemia. PAH activity is regulated by multiple factors, including phosphorylation and ligand binding. In particular, PAH displays positive cooperativity for L-Phe, which is proposed to bind the enzyme on an allosteric site in the N-terminal regulatory domain (RD, also classified as an ACT domain. This domain is found in several proteins and is able to bind amino acids. We used molecular dynamics simulations to obtain dynamical and structural insights into the isolated RD of PAH. Here we show that the principal motions involve conformational changes leading from an initial open to a final closed domain structure. The global intrinsic motions of the RD are correlated with exposure to solvent of a hydrophobic surface, which corresponds to the ligand binding-site of the ACT domain. Our results strongly suggest a relationship between the Phe-binding function and the overall dynamic behaviour of the enzyme. This relationship may be affected by structure-disturbing mutations. To elucidate the functional implications of the mutations, we investigated the structural effects on the dynamics of the human RD PAH induced by six missense hyperphenylalaninemia-causing mutations, namely p.G46S, p.F39C, p.F39L, p.I65S, p.I65T and p.I65V. These studies showed that the alterations in RD hydrophobic interactions induced by missense mutations could affect the functionality of the whole enzyme.

  9. Structural features of the regulatory ACT domain of phenylalanine hydroxylase.

    Science.gov (United States)

    Carluccio, Carla; Fraternali, Franca; Salvatore, Francesco; Fornili, Arianna; Zagari, Adriana

    2013-01-01

    Phenylalanine hydroxylase (PAH) catalyzes the conversion of L-Phe to L-Tyr. Defects in PAH activity, caused by mutations in the human gene, result in the autosomal recessively inherited disease hyperphenylalaninemia. PAH activity is regulated by multiple factors, including phosphorylation and ligand binding. In particular, PAH displays positive cooperativity for L-Phe, which is proposed to bind the enzyme on an allosteric site in the N-terminal regulatory domain (RD), also classified as an ACT domain. This domain is found in several proteins and is able to bind amino acids. We used molecular dynamics simulations to obtain dynamical and structural insights into the isolated RD of PAH. Here we show that the principal motions involve conformational changes leading from an initial open to a final closed domain structure. The global intrinsic motions of the RD are correlated with exposure to solvent of a hydrophobic surface, which corresponds to the ligand binding-site of the ACT domain. Our results strongly suggest a relationship between the Phe-binding function and the overall dynamic behaviour of the enzyme. This relationship may be affected by structure-disturbing mutations. To elucidate the functional implications of the mutations, we investigated the structural effects on the dynamics of the human RD PAH induced by six missense hyperphenylalaninemia-causing mutations, namely p.G46S, p.F39C, p.F39L, p.I65S, p.I65T and p.I65V. These studies showed that the alterations in RD hydrophobic interactions induced by missense mutations could affect the functionality of the whole enzyme.

  10. Approximation method to compute domain related integrals in structural studies

    Science.gov (United States)

    Oanta, E.; Panait, C.; Raicu, A.; Barhalescu, M.; Axinte, T.

    2015-11-01

    Various engineering calculi use integral calculus in theoretical models, i.e. analytical and numerical models. For usual problems, integrals have mathematical exact solutions. If the domain of integration is complicated, there may be used several methods to calculate the integral. The first idea is to divide the domain in smaller sub-domains for which there are direct calculus relations, i.e. in strength of materials the bending moment may be computed in some discrete points using the graphical integration of the shear force diagram, which usually has a simple shape. Another example is in mathematics, where the surface of a subgraph may be approximated by a set of rectangles or trapezoids used to calculate the definite integral. The goal of the work is to introduce our studies about the calculus of the integrals in the transverse section domains, computer aided solutions and a generalizing method. The aim of our research is to create general computer based methods to execute the calculi in structural studies. Thus, we define a Boolean algebra which operates with ‘simple’ shape domains. This algebraic standpoint uses addition and subtraction, conditioned by the sign of every ‘simple’ shape (-1 for the shapes to be subtracted). By ‘simple’ shape or ‘basic’ shape we define either shapes for which there are direct calculus relations, or domains for which their frontiers are approximated by known functions and the according calculus is carried out using an algorithm. The ‘basic’ shapes are linked to the calculus of the most significant stresses in the section, refined aspect which needs special attention. Starting from this idea, in the libraries of ‘basic’ shapes, there were included rectangles, ellipses and domains whose frontiers are approximated by spline functions. The domain triangularization methods suggested that another ‘basic’ shape to be considered is the triangle. The subsequent phase was to deduce the exact relations for the

  11. A top-down approach for fabricating free-standing bio-carbon supercapacitor electrodes with a hierarchical structure

    OpenAIRE

    Yingzhi Li; Qinghua Zhang; Junxian Zhang; Lei Jin; Xin Zhao; Ting Xu

    2015-01-01

    Biomass has delicate hierarchical structures, which inspired us to develop a cost-effective route to prepare electrode materials with rational nanostructures for use in high-performance storage devices. Here, we demonstrate a novel top-down approach for fabricating bio-carbon materials with stable structures and excellent diffusion pathways; this approach is based on carbonization with controlled chemical activation. The developed free-standing bio-carbon electrode exhibits a high specific ca...

  12. Solvent-mediated gel formation, hierarchical structures, and rheological properties of organogels.

    Science.gov (United States)

    Su, Ming-Ming; Yang, Hai-Kuan; Ren, Li-Jun; Zheng, Ping; Wang, Wei

    2015-01-28

    We report the formation of solvent-mediated gels as well as their hierarchical structures and rheological properties. The gelator used is a hybrid with a molecular structure of cholesterol-polyoxometalate-cholesterol, in which the cholesterol dissolves well in toluene and N,N-dimethylformamide (DMF), whereas the polyoxometalate cluster dissolves only in DMF. These solubility differences enable the gelator to form thermally reversible supramolecular organogels by mixing solvents of toluene and DMF when the volume fraction, ftol, of toluene is larger than 85.7 v/v%. We found a V-shaped correlation between the gelation times, tgel and ftol: tgel decreases from 1300 min to 2 min when ftol increases from 85.7 v/v% to 90.0 v/v%. It then increases from 2 min to 5800 min when ftol further increases from 90.0 v/v% to 100.0 v/v%. We observed ribbon-like self-assembled structures in the gels as well as a structural evolution from rigid and straight ribbons to twistable ones from ftol=85.7 v/v% to ftol=100.0 v/v%. These ribbons constitute two three-dimensional (3D) gel networks: one is constructed via physical connection of the rigid and straight ribbon, and the other is built up from ribbons splitting and intertwining. The latter has a better 3D gel network that offers improved rheological properties. Fundamentally, this solvent-mediated approach regulates the balance between solubility and insolubility of this gelator in the mixing solvents. It also provides a new method for the preparation of organogels.

  13. The neural processing of hierarchical structure in music and speech at different timescales

    Directory of Open Access Journals (Sweden)

    Morwaread Mary Farbood

    2015-05-01

    Full Text Available Music, like speech, is a complex auditory signal that contains structures at multiple timescales, and as such a potentially powerful entry point into the question of how the brain integrates complex streams of information. Using an experimental design modeled after previous studies that used scrambled versions of a spoken story (Lerner, Honey, Silbert, & Hasson, 2011 and a silent movie (Hasson, Yang, Vallines, Heeger, & Rubin, 2008, we investigate whether listeners perceive hierarchical structure in music beyond short (~6 sec time windows and whether there is cortical overlap between music and language processing at multiple timescales. Experienced pianists were presented with an extended musical excerpt scrambled at multiple timescales––by measure, phrase, and section––while measuring brain activity with functional magnetic resonance imaging (fMRI. The reliability of evoked activity, as quantified by inter-subject correlation of the fMRI responses was measured. We found that response reliability depended systematically on musical structural coherence, revealing a topographically organized hierarchy of processing timescales. Early auditory areas (at the bottom of the hierarchy responded reliably in all conditions. For brain areas at the top of the hierarchy, the original (unscrambled excerpt evoked more reliable responses than any of the scrambled excerpts, indicating that these brain areas process long-timescale musical structures, on the order of minutes. The topography of processing timescales was analogous with that reported previously for speech, but the timescale gradients for music and speech overlapped with one another only partially, suggesting that temporally analogous structures––words/measures, sentences/musical phrases, paragraph/sections––are processed separately.

  14. The neural processing of hierarchical structure in music and speech at different timescales

    Science.gov (United States)

    Farbood, Morwaread M.; Heeger, David J.; Marcus, Gary; Hasson, Uri; Lerner, Yulia

    2015-01-01

    Music, like speech, is a complex auditory signal that contains structures at multiple timescales, and as such is a potentially powerful entry point into the question of how the brain integrates complex streams of information. Using an experimental design modeled after previous studies that used scrambled versions of a spoken story (Lerner et al., 2011) and a silent movie (Hasson et al., 2008), we investigate whether listeners perceive hierarchical structure in music beyond short (~6 s) time windows and whether there is cortical overlap between music and language processing at multiple timescales. Experienced pianists were presented with an extended musical excerpt scrambled at multiple timescales—by measure, phrase, and section—while measuring brain activity with functional magnetic resonance imaging (fMRI). The reliability of evoked activity, as quantified by inter-subject correlation of the fMRI responses, was measured. We found that response reliability depended systematically on musical structure coherence, revealing a topographically organized hierarchy of processing timescales. Early auditory areas (at the bottom of the hierarchy) responded reliably in all conditions. For brain areas at the top of the hierarchy, the original (unscrambled) excerpt evoked more reliable responses than any of the scrambled excerpts, indicating that these brain areas process long-timescale musical structures, on the order of minutes. The topography of processing timescales was analogous with that reported previously for speech, but the timescale gradients for music and speech overlapped with one another only partially, suggesting that temporally analogous structures—words/measures, sentences/musical phrases, paragraph/sections—are processed separately. PMID:26029037

  15. Origin and evolution of protein fold designs inferred from phylogenomic analysis of CATH domain structures in proteomes.

    Directory of Open Access Journals (Sweden)

    Syed Abbas Bukhari

    Full Text Available The spatial arrangements of secondary structures in proteins, irrespective of their connectivity, depict the overall shape and organization of protein domains. These features have been used in the CATH and SCOP classifications to hierarchically partition fold space and define the architectural make up of proteins. Here we use phylogenomic methods and a census of CATH structures in hundreds of genomes to study the origin and diversification of protein architectures (A and their associated topologies (T and superfamilies (H. Phylogenies that describe the evolution of domain structures and proteomes were reconstructed from the structural census and used to generate timelines of domain discovery. Phylogenies of CATH domains at T and H levels of structural abstraction and associated chronologies revealed patterns of reductive evolution, the early rise of Archaea, three epochs in the evolution of the protein world, and patterns of structural sharing between superkingdoms. Phylogenies of proteomes confirmed the early appearance of Archaea. While these findings are in agreement with previous phylogenomic studies based on the SCOP classification, phylogenies unveiled sharing patterns between Archaea and Eukarya that are recent and can explain the canonical bacterial rooting typically recovered from sequence analysis. Phylogenies of CATH domains at A level uncovered general patterns of architectural origin and diversification. The tree of A structures showed that ancient structural designs such as the 3-layer (αβα sandwich (3.40 or the orthogonal bundle (1.10 are comparatively simpler in their makeup and are involved in basic cellular functions. In contrast, modern structural designs such as prisms, propellers, 2-solenoid, super-roll, clam, trefoil and box are not widely distributed and were probably adopted to perform specialized functions. Our timelines therefore uncover a universal tendency towards protein structural complexity that is remarkable.

  16. Identifying the hierarchical structure of customer complaint behaviors on the example of Iranian hotels

    Directory of Open Access Journals (Sweden)

    P. Charsetad

    2016-12-01

    Full Text Available The aim of this article. Consumer researchers have become increasingly interested in the study of coping. Despite the importance of coping strategies in service failure context, there isn’t any considerable research in Iran to identify coping behaviors. This article contributes to this novel paradigm by investigating structural theories of coping with service failure using a hierarchical structure. The purpose of present article was to identify and classify the coping strategies of Iranian people in the higher order and lower order factors in encountering to service failure. The results of the analysis. In this study nine dimensions, explaining the coping strategies with service failures, have been identified. The nine identified factors were labeled based on previous studies including; social support, avoidance, negative word of mouth, complain to service provider, third party complain, fatalism coping, self-controlling, emotional venting and denial coping. Reliability was evaluated on internal consistency by calculating Cronbach’s Alpha coefficient. The resulting coefficients were higher than 0,7 for all factors. After the extraction of lower order factors, Varimax rotation was used and was extracted three factors which were labeled as “active coping”, “expressive coping” and “denial / avoiding coping” based on literature review and previous research. The findings have allowed us to largely confirm the results obtained by previous studies, but using a sample of Iranian consumers. Specially, the factors found in this study were very similar to three dimensional model found in Duhachek and Tsarenko & Strizhakva. Therefore, can be concluded that there were several similarities between Iranian and other countries in coping behaviors. This fact contributed to the validation of this coping strategies framework showing its application to different contexts. So, a contribution of this study was to acknowledge this as an instrument to

  17. Template-free synthesis of hierarchical TiO2 structures and their application in dye-sensitized solar cells.

    Science.gov (United States)

    Shao, Fang; Sun, Jing; Gao, Lian; Yang, Songwang; Luo, Jianqiang

    2011-06-01

    We demonstrate here the synthesis of a hierarchical TiO(2) architecture without any surfactants or templates. Two kinds of structure existed simultaneously, the ordered nanoarrays at bottom provided direct conduction pathway for photo generated electrons, while the upper micro-flowers consisted of nanobelt as building units increased the light harvesting ability as the scattering part. The formation mechanism of the hierarchical architecture has been proposed by studying the morphology evolution processes upon reaction time. The performance of dye-sensitized solar cells based on the obtained hierarchical anatase TiO(2) has been also studied, giving a J(SC) = 12.44 mA cm(-2), V(OC) = 0.64 V, FF = 69.05%, and η = 5.53%, which is superior than commercial TiO(2) (P25). The UV-vis results prove that the obtained morphology is beneficial to light-scattering and thus increases the light harvesting ability. This hierarchical TiO(2) structure offers great potential for the development of high-efficiency DSSCs. © 2011 American Chemical Society

  18. TIME DOMAIN PARAMETERS IDENTIFICATION OF FOUNDATION-STRUCTURE INTERACTION SYSTEM

    Institute of Scientific and Technical Information of China (English)

    HUANG Yi; LIU Zeng-rong

    2005-01-01

    The time domain parameter identification method of the foundation-structure interaction system is presented. On the basis of building the computation mode and the motion equation of the foundation-structure interaction system, the system parameter identification method was established by using the extended Kalman filter (EKF)technique and taking the unknown parameters in the system as the augment state variables. And the time parameter identification process of the foundation-structure interaction system was implemented by using the data of the layer foundation-storehouse interaction system model test on the large vibration platform. The computation result shows that the established parameter identification method can induce good parameter estmation.

  19. Solution structure of proinsulin: connecting domain flexibility and prohormone processing.

    Science.gov (United States)

    Yang, Yanwu; Hua, Qing-Xin; Liu, Jin; Shimizu, Eri H; Choquette, Meredith H; Mackin, Robert B; Weiss, Michael A

    2010-03-12

    The folding of proinsulin, the single-chain precursor of insulin, ensures native disulfide pairing in pancreatic beta-cells. Mutations that impair folding cause neonatal diabetes mellitus. Although the classical structure of insulin is well established, proinsulin is refractory to crystallization. Here, we employ heteronuclear NMR spectroscopy to characterize a monomeric analogue. Proinsulin contains a native-like insulin moiety (A- and B-domains); the tethered connecting (C) domain (as probed by {(1)H}-(15)N nuclear Overhauser enhancements) is progressively less ordered. Although the BC junction is flexible, residues near the CA junction exhibit alpha-helical-like features. Relative to canonical alpha-helices, however, segmental (13)C(alpha/beta) chemical shifts are attenuated, suggesting that this junction and contiguous A-chain residues are molten. We propose that flexibility at each C-domain junction facilitates prohormone processing. Studies of protease SPC3 (PC1/3) suggest that C-domain sequences contribute to cleavage site selection. The structure of proinsulin provides a foundation for studies of insulin biosynthesis and its impairment in monogenic forms of diabetes mellitus.

  20. Domain structure and phase transition in Sc-doped zirconia

    Energy Technology Data Exchange (ETDEWEB)

    Brunauer, G.; Boysen, H.; Frey, F. [Institute for Crystallography und Applied Mineralogy, LMU Muenchen, Munich (Germany); Ehrenberg, H. [Institute for Materials Science, TU Darmstadt, Darmstadt (Germany)

    2002-01-21

    The temperature dependence of the domain structure associated with the ferroelastic phase transition (Fm{sup 3-bar}m{r_reversible}R{sup 3-bar}m) in ZrO{sub 2} doped with 11% Sc{sub 2}O{sub 3} has been determined from a peak shape analysis of high-resolution synchrotron x-ray powder diffraction data. In the temperature region of coexisting phases the observed characteristic anisotropic broadening and asymmetry of the lines is modelled by three different phases: a main rhombohedral phase, a distorted rhombohedral phase with a smaller c/a ratio, and a cubic phase. The latter two are assigned to the internal structure of the domain walls between two adjacent twin domains. The size and amount of the cubic phase show an initially slow increase with temperature followed by a very steep increase and a slow one after that. The size of the (main) rhombohedral domains remains nearly constant, while (micro-) strain in the distorted regions gradually decreases. (author)

  1. Hierarchical structure of mitochondrial DNA gene flow among humpback whales Megaptera novaeangliae, world-wide.

    Science.gov (United States)

    Baker, C S; Slade, R W; Bannister, J L; Abernethy, R B; Weinrich, M T; Lien, J; Urban, J; Corkeron, P; Calmabokidis, J; Vasquez, O

    1994-08-01

    The genetic structure of humpback whale populations and subpopulation divisions is described by restriction fragment length analysis of the mitochondrial (mt) DNA from samples of 230 whales collected by biopsy darting in 11 seasonal habitats representing six subpopulations, or 'stocks', world-wide. The hierarchical structure of mtDNA haplotype diversity among population subdivisions is described using the analysis of molecular variance (AMOVA) procedure, the analysis of gene identity, and the genealogical relationship of haplotypes as constructed by parsimony analysis and distance clustering. These analyses revealed: (i) significant partitioning of world-wide genetic variation among oceanic populations, among subpopulations or 'stocks' within oceanic populations and among seasonal habitats within stocks; (ii) fixed categorical segregation of haplotypes on the south-eastern Alaska and central California feeding grounds of the North Pacific; (iii) support for the division of the North Pacific population into a central stock which feeds in Alaska and winters in Hawaii, and an eastern or 'American' stock which feeds along the coast of California and winters near Mexico; (iv) evidence of genetic heterogeneity within the Gulf of Maine feeding grounds and among the sampled feeding and breeding grounds of the western North Atlantic; and (v) support for the historical division between the Group IV (Western Australia) and Group V (eastern Australia, New Zealand and Tonga) stocks in the Southern Oceans. Overall, our results demonstrate a striking degree of genetic structure both within and between oceanic populations of humpback whales, despite the nearly unlimited migratory potential of this species. We suggest that the humpback whale is a suitable demographic and genetic model for the management of less tractable species of baleen whales and for the general study of gene flow among long-lived, mobile vertebrates in the marine ecosystem.

  2. Fabrication and in vitro characterization of magnetic hydroxycarbonate apatite coatings with hierarchically porous structures.

    Science.gov (United States)

    Guo, Yaping; Zhou, Yu; Jia, Dechang; Meng, Qingchang

    2008-07-01

    Hydroxycarbonate apatite/Fe(3)O(4) composite coatings (MHACs) with hierarchically porous structures were fabricated by electrophoretic deposition of CaCO(3)/Fe(3)O(4) particles on Ti6Al4V substrates followed by treatment with phosphate buffer solution (PBS) at 37 degrees C. The effects of Fe(3)O(4) on the conversion rate of calcium carbonate to hydroxycarbonate apatite and the porous structures and in vitro bioactivity of MHACs were investigated. After soaking CaCO(3)/Fe(3)O(4) coatings in PBS, hydroxycarbonate apatite nucleates heterogeneously on the surfaces of CaCO(3)/Fe(3)O(4) particles and forms a plate-like structure. Fe(3)O(4) increases the velocity of nucleus formation of hydroxycarbonate apatite. After soaking for 1day, the percentage of unreacted calcium carbonate for MHACs is approximately 9.1%, lower than the approximately 41.0% for hydroxycarbonate apatite coatings (HCACs). As the CaCO(3)/Fe(3)O(4) coatings are converted to MHACs, macropores with a pore size of approximately 4mum on the coatings and mesopores with a pore size of approximately 3.9nm within the hydroxycarbonate apatite plates are formed. The mesopores remain in the MHACs after treatment with PBS for 9 days, while they disappear in the HCACs. Simulated body fluid immersion tests reveal that Fe(3)O(4) improves the in vitro bioactivity of biocoatings. The amount of bone-like apatite precipitated on the surfaces of MHACs is greater than that on the surfaces of HCACs.

  3. Challenges in engineering osteochondral tissue grafts with hierarchical structures Ivana Gadjanski, Gordana Vunjak Novakovic

    Science.gov (United States)

    Gadjanski, Ivana; Vunjak-Novakovic, Gordana

    2015-01-01

    Introduction A major hurdle in treating osteochondral (OC) defects are the different healing abilities of two types of tissues involved - articular cartilage and subchondral bone. Biomimetic approaches to OC-construct-engineering, based on recapitulation of biological principles of tissue development and regeneration, have potential for providing new treatments and advancing fundamental studies of OC tissue repair. Areas covered This review on state of the art in hierarchical OC tissue graft engineering is focused on tissue engineering approaches designed to recapitulate the native milieu of cartilage and bone development. These biomimetic systems are discussed with relevance to bioreactor cultivation of clinically sized, anatomically shaped human cartilage/bone constructs with physiologic stratification and mechanical properties. The utility of engineered OC tissue constructs is evaluated for their use as grafts in regenerative medicine, and as high-fidelity models in biological research. Expert opinion A major challenge in engineering OC tissues is to generate a functionally integrated stratified cartilage-bone structure starting from one single population of mesenchymal cells, while incorporating perfusable vasculature into the bone, and in bone-cartilage interface. To this end, new generations of advanced scaffolds and bioreactors, implementation of mechanical loading regimens, and harnessing of inflammatory responses of the host will likely drive the further progress. PMID:26195329

  4. SO2 Emissions in China – Their Network and Hierarchical Structures

    Science.gov (United States)

    Yan, Shaomin; Wu, Guang

    2017-01-01

    SO2 emissions lead to various harmful effects on environment and human health. The SO2 emission in China has significant contribution to the global SO2 emission, so it is necessary to employ various methods to study SO2 emissions in China with great details in order to lay the foundation for policymaking to improve environmental conditions in China. Network analysis is used to analyze the SO2 emissions from power generation, industrial, residential and transportation sectors in China for 2008 and 2010, which are recently available from 1744 ground surface monitoring stations. The results show that the SO2 emissions from power generation sector were highly individualized as small-sized clusters, the SO2 emissions from industrial sector underwent an integration process with a large cluster contained 1674 places covering all industrial areas in China, the SO2 emissions from residential sector was not impacted by time, and the SO2 emissions from transportation sector underwent significant integration. Hierarchical structure is obtained by further combining SO2 emissions from all four sectors and is potentially useful to find out similar patterns of SO2 emissions, which can provide information on understanding the mechanisms of SO2 pollution and on designing different environmental measure to combat SO2 emissions. PMID:28387301

  5. The Magellanic Satellites Survey: Searching for Hierarchical Structure Formation within the Local Group

    Science.gov (United States)

    Bechtol, Keith; Magellanic Satellites Survey (MagLiteS)

    2017-01-01

    A generic prediction of galaxy formation in the standard cosmological model with cold dark matter is the hierarchical assembly of structure on mass scales ranging from ultra-faint galaxies to galaxy clusters. In the Local Group, dozens of galaxies have been found orbiting the Milky Way and Andromeda. The question of whether the largest Milky Way satellites, the Large and Small Magellanic Clouds, brought in their own entourage of satellites has been a long standing puzzle, and has garnered renewed interest following the recent discovery of more than a dozen ultra-faint galaxy candidates in the southern hemisphere. The on-going Magellanic Satellites Survey (MagLiteS) aims to complete an annulus of contiguous deep optical imaging with Blanco/DECam around the periphery of the Magellanic Clouds, enabling a systematic search for ultra-faint galaxies and other low-surface-brightness stellar substructures associated with the Magellanic system. I will report on the progress of MagLiteS and discuss science highlights from the first observing season, including a new ultra-faint galaxy candidate located ~11 kpc from the Large Magellanic Cloud.

  6. Hierarchically-structured silver nanoflowers for highly conductive metallic inks with dramatically reduced filler concentration.

    Science.gov (United States)

    C, Muhammed Ajmal; K P, Faseela; Singh, Swati; Baik, Seunghyun

    2016-10-07

    Silver has long been employed as an electrically conductive component, and morphology-dependent properties have been actively investigated. Here we present a novel scalable synthesis method of flower-shaped silver nanoparticles (silver nanoflowers, Ag NFs). The preferential affinity of citrate molecules on (111) surface of silver enabled spontaneous anisotropic growth of Ag NFs (bud size: 250~580 nm, single crystalline petal thickness: 9~22 nm) with high reproducibility and a high yield of >99.5%. The unique hierarchical structure resulted in coalescence of petals over 80~120 °C which was practically employed in conductive inks to construct percolation pathways among Ag NFs. The ink with only 3 wt% of Ag NFs provided two orders of magnitude greater conductivity (1.008 × 10(5) Scm(-1)), at a low curing temperature of 120 °C, compared with the silver nanoparticle ink with a much higher silver concentration (50 wt%). This extraordinary property may provide an excellent opportunity for Ag NFs for practical applications in printable and flexible electronics.

  7. Oscillatory behaviors and hierarchical assembly of contractile structures in intercalating cells

    Science.gov (United States)

    Fernandez-Gonzalez, Rodrigo; Zallen, Jennifer A.

    2011-08-01

    Fluctuations in the size of the apical cell surface have been associated with apical constriction and tissue invagination. However, it is currently not known if apical oscillatory behaviors are a unique property of constricting cells or if they constitute a universal feature of the force balance between cells in multicellular tissues. Here, we set out to determine whether oscillatory cell behaviors occur in parallel with cell intercalation during the morphogenetic process of axis elongation in the Drosophila embryo. We applied multi-color, time-lapse imaging of living embryos and SIESTA, an integrated tool for automated and semi-automated cell segmentation, tracking, and analysis of image sequences. Using SIESTA, we identified cycles of contraction and expansion of the apical surface in intercalating cells and characterized them at the molecular, cellular, and tissue scales. We demonstrate that apical oscillations are anisotropic, and this anisotropy depends on the presence of intact cell-cell junctions and spatial cues provided by the anterior-posterior patterning system. Oscillatory cell behaviors during axis elongation are associated with the hierarchical assembly and disassembly of contractile actomyosin structures at the medial cortex of the cell, with actin localization preceding myosin II and with the localization of both proteins preceding changes in cell shape. We discuss models to explain how the architecture of cytoskeletal networks regulates their contractile behavior and the mechanisms that give rise to oscillatory cell behaviors in intercalating cells.

  8. Multifunctional hybrid porous filters with hierarchical structures for simultaneous removal of indoor VOCs, dusts and microorganisms.

    Science.gov (United States)

    Zhao, Yang; Low, Ze-Xian; Feng, Shasha; Zhong, Zhaoxiang; Wang, Yong; Yao, Zhong

    2017-02-23

    Air purification often requires multiple layers of filters with different functions to remove various air pollutants, which lead to high pressure drop, high air flow path and frequent filter replacement. In this work, a novel multifunctional Ag@MWCNTs/Al2O3 hybrid filter with a depth-type hierarchical structure for simultaneous removal of fine particles, microorganisms and VOCs was designed and fabricated. The novel hybrid air filter showed leading air purification performances to date, achieving 82.24% degradation of formaldehyde at room temperature, 99.99% formaldehyde degradation at 55 °C and complete retention of indoor airborne microorganisms. The complete particle retention rate (100% retention) based on the most penetrating particle size (MPPS, aerodynamic diameter ≦300 nm) of Ag@MWCNTs/Al2O3 was achieved at an only 35.60% pressure drop compared with the pristine Al2O3 filter, leading to the highest quality factor (Qf) ever reported. Furthermore, the Ag@MWCNTs/Al2O3 hybrid filter showed excellent water repellency (water contact angle of 139.6 ± 2.9°), prolonging the service life of the filters and improving the air purification efficiency. The novel Ag@MWCNTs/Al2O3 hybrid filter exhibits remarkable air purification performance in both laboratory synthetic conditions as well as in the "real world" and shows great promise as an effective single replacement for multiple layers of air purifying filters.

  9. Stretchable conducting materials with multi-scale hierarchical structures for biomedical applications

    Science.gov (United States)

    Kim, Hyun; Shim, Bong Sup

    2014-08-01

    Electrogenetic tissues in human body such as central and peripheral nerve systems, muscular and cardiomuscular systems are soft and stretchable materials. However, most of the artificial materials, interfacing with those conductive tissues, such as neural electrodes and cardiac pacemakers, have stiff mechanical properties. The rather contradictory properties between natural and artificial materials usually cause critical incompatibility problems in implanting bodymachine interfaces for wide ranges of biomedical devices. Thus, we developed a stretchable and electrically conductive material with complex hierarchical structures; multi-scale microstructures and nanostructural electrical pathways. For biomedical purposes, an implantable polycaprolactone (PCL) membrane was coated by molecularly controlled layer-bylayer (LBL) assembly of single-walled carbon nanotubes (SWNTs) or poly(3,4-ethylenedioxythiophene) (PEDOT). The soft PCL membrane with asymmetric micro- and nano-pores provides elastic properties, while conductive SWNT or PEDOT coating preserves stable electrical conductivity even in a fully stretched state. This electrical conductivity enhanced ionic cell transmission and cell-to-cell interactions as well as electrical cellular stimulation on the membrane. Our novel stretchable conducting materials will overcome long-lasting challenges for bioelectronic applications by significantly reducing mechanical property gaps between tissues and artificial materials and by providing 3D interconnected electro-active pathways which can be available even at a fully stretched state.

  10. Interference mitigation for broadcast in hierarchical cell structure networks: Transmission strategy and area spectral efficiency

    KAUST Repository

    Yang, Yuli

    2014-10-01

    In this paper, a hierarchical cell structure (HCS) is considered, where an access point (AP) broadcasts to local nodes (LNs) over orthogonal frequency subbands within a local cell located in a macrocell. Since the local cell shares the spectrum licensed to the macrocell, a given LN is interfered with by the macrocell user (MU)\\'s transmissions over the same subband. To improve the performance of the AP\\'s broadcast service, a novel transmission strategy is proposed to mitigate the interference from the MU to the LN while achieving diversity gain. For the purpose of performance evaluation, the ergodic capacity of the proposed scheme is quantified, and the corresponding closed-form expression is obtained. By comparing with the traditional transmission scheme, which suffers from MU\\'s interference, illustrative numerical results substantiate that the proposed scheme achieves better performance than the traditional scheme as the MU-LN mean channel power gain is larger than half of the AP-LN mean channel power gain. Subsequently, we develop an optimized network design by maximizing the area spectral efficiency (ASE) of the AP\\'s broadcast in the local cell.

  11. Hierarchical structures of cactus spines that aid in the directional movement of dew droplets.

    Science.gov (United States)

    Malik, F T; Clement, R M; Gethin, D T; Kiernan, M; Goral, T; Griffiths, P; Beynon, D; Parker, A R

    2016-08-06

    Three species of cactus whose spines act as dew harvesters were chosen for this study: Copiapoa cinerea var. haseltoniana, Mammillaria columbiana subsp. yucatanensis and Parodia mammulosa and compared with Ferocactus wislizenii whose spines do not perform as dew harvesters. Time-lapse snapshots of C. cinerea showed movement of dew droplets from spine tips to their base, even against gravity. Spines emanating from one of the areoles of C. cinerea were submerged in water laced with fluorescent nanoparticles and this particular areole with its spines and a small area of stem was removed and imaged. These images clearly showed that fluorescent water had moved into the stem of the plant. Lines of vascular bundles radiating inwards from the surface areoles (from where the spines emanate) to the core of the stem were detected using magnetic resonance imaging, with the exception of F. wislizenii that does not harvest dew on its spines. Spine microstructures were examined using SEM images and surface roughness measurements (Ra and Rz) taken of the spines of C. cinerea It was found that a roughness gradient created by tapered microgrooves existed that could potentially direct surface water from a spine tip to its base.This article is part of the themed issue 'Bioinspired hierarchically structured surfaces for green science'.

  12. Mastering algebra retrains the visual system to perceive hierarchical structure in equations.

    Science.gov (United States)

    Marghetis, Tyler; Landy, David; Goldstone, Robert L

    2016-01-01

    Formal mathematics is a paragon of abstractness. It thus seems natural to assume that the mathematical expert should rely more on symbolic or conceptual processes, and less on perception and action. We argue instead that mathematical proficiency relies on perceptual systems that have been retrained to implement mathematical skills. Specifically, we investigated whether the visual system-in particular, object-based attention-is retrained so that parsing algebraic expressions and evaluating algebraic validity are accomplished by visual processing. Object-based attention occurs when the visual system organizes the world into discrete objects, which then guide the deployment of attention. One classic signature of object-based attention is better perceptual discrimination within, rather than between, visual objects. The current study reports that object-based attention occurs not only for simple shapes but also for symbolic mathematical elements within algebraic expressions-but only among individuals who have mastered the hierarchical syntax of algebra. Moreover, among these individuals, increased object-based attention within algebraic expressions is associated with a better ability to evaluate algebraic validity. These results suggest that, in mastering the rules of algebra, people retrain their visual system to represent and evaluate abstract mathematical structure. We thus argue that algebraic expertise involves the regimentation and reuse of evolutionarily ancient perceptual processes. Our findings implicate the visual system as central to learning and reasoning in mathematics, leading us to favor educational approaches to mathematics and related STEM fields that encourage students to adapt, not abandon, their use of perception.

  13. Dynamics of Infuence on Hierarchical Structures: Towards the Statistical Mechanics of Social Class Struggle

    CERN Document Server

    Fotouhi, Babak

    2013-01-01

    The theory of class struggle is modeled within the framework of statistical physics. Dichotomous spin dynamics on a pyramid-shaped hierarchical structure are examined (akin to the Cayley tree). A "head node" is placed at the apex. The system embodies a number of "classes", corresponding to different levels of the hierarchy. A class is comprised of nodes that are equidistant from the head. Weighted links exist between nodes from the same and different classes. We study the effect of these weights on the dynamics. The spin (hereafter, "state") of the head node is fixed, and it imposes its state on the rest of the hierarchy. Necessary conditions so that the classes eventually repudiate or acquiesce in the state imposed by the head node are found. The results show that, to reach unanimity across the hierarchy, it suffices for the head node to make the bottom-most class adopt the same state. Then the rest of the hierarchy will inevitably comply, regardless of the inter/intra class link configurations. Hence the ro...

  14. Hydrothermal Fabrication of WO3 Hierarchical Architectures: Structure, Growth and Response

    Directory of Open Access Journals (Sweden)

    Chuan-Sheng Wu

    2015-07-01

    Full Text Available Recently hierarchical architectures, consisting of two-dimensional (2D nanostructures, are of great interest for potential applications in energy and environmental. Here, novel rose-like WO3 hierarchical architectures were successfully synthesized via a facile hydrothermal method. The as-prepared WO3 hierarchical architectures were in fact assembled by numerous nanosheets with an average thickness of ~30 nm. We found that the oxalic acid played a significant role in governing morphologies of WO3 during hydrothermal process. Based on comparative studies, a possible formation mechanism was also proposed in detail. Furthermore, gas-sensing measurement showed that the well-defined 3D WO3 hierarchical architectures exhibited the excellent gas sensing properties towards CO.

  15. Hierarchical Structure of Abilities: Factorial Validation of Higher Order Constructs in Thurstone's Primary Mental Abilities.

    Science.gov (United States)

    Paden, Patricia

    1981-01-01

    Thurstone's primary mental abilities (1938/1968) involving 57 tests were factor analyzed to produce a comprehensive hierarchical model. Kaiser's varimax solution for primary mental abilities served as the raw data for this study. (Author/GK)

  16. Origin and structure of polar domains in doped molecular crystals

    Science.gov (United States)

    Meirzadeh, E.; Azuri, I.; Qi, Y.; Ehre, D.; Rappe, A. M.; Lahav, M.; Kronik, L.; Lubomirsky, I.

    2016-11-01

    Doping is a primary tool for the modification of the properties of materials. Occlusion of guest molecules in crystals generally reduces their symmetry by the creation of polar domains, which engender polarization and pyroelectricity in the doped crystals. Here we describe a molecular-level determination of the structure of such polar domains, as created by low dopant concentrations (<0.5%). The approach comprises crystal engineering and pyroelectric measurements, together with dispersion-corrected density functional theory and classical molecular dynamics calculations of the doped crystals, using neutron diffraction data of the host at different temperatures. This approach is illustrated using centrosymmetric α-glycine crystals doped with minute amounts of different L-amino acids. The experimentally determined pyroelectric coefficients are explained by the structure and polarization calculations, thus providing strong support for the local and global understanding of how different dopants influence the properties of molecular crystals.

  17. ADAM-15 Disintegrin-Like Domain Structure and Function

    Directory of Open Access Journals (Sweden)

    Dong Lu

    2010-10-01

    Full Text Available The ADAM (a disintegrin-like and metalloproteinase proteins are a family of transmembrane cell-surface proteins with important functions in adhesion and proteolytic processing in all animals. Human ADAM-15 is the only member of the ADAM family with the integrin binding motif Arg-Gly-Asp (RGD in its disintegrin-like domain. This motif is also found in most snake venom disintegrins and other disintegrin-like proteins. This unique RGD motif within ADAM-15 serves as an integrin ligand binding site, through which it plays a pivotal role in interacting with integrin receptors, a large family of heterodimeric transmembrane glycoproteins. This manuscript will present a review of the RGD-containing disintegrin-like domain structures and the structural features responsible for their activity as antagonists of integrin function in relation to the canonical RGD template.

  18. Synthesis, structure and properties of hierarchical nanostructured porous materials studied by molecular dynamics simulations

    Science.gov (United States)

    Chae, Kisung

    For applications of porous materials in many fields of technological importance, such as catalysis, filtration, separation, energy storage and conversion, the efficiency is often limited by chemical kinetics, and/or diffusion of reactants and products to and from the active sites. Hierarchical nanostructured porous materials (HNPMs) that possess both mesopores (2 nm size size size and the pore wall roughness as well as the microporous structure such as the density and the graphitic pore walls can be independently controlled by synthesis parameters, such as the size of the template, the interaction strength between the template and carbon source, the initial carbon density and the quench rate, respectively. These atomic models allowed us to quantify the structure-mechanical properties relation in aligned carbon nanotubes/amorphous porous carbon nanocomposites. Our study shows that there is an optimum balance between the crystallinity of CNTs and the number bridging bonds between CNTs and the microporous matrix in order for the nanocomposites to have desired mechanical properties such as high stiffness and high buckling resistance under compressive loading. We further used these models to study the effects of the mesopore size and the pore wall roughness on the transport behaviors of methane in HNPCs. Our study shows that some defects in the mesopore walls do not have a significant effect on transport properties, especially in large channels. However, when the walls of small channels become rough, adsorption and transport behaviors change dramatically. Our study shows that the enhanced flow in CNTs observed in experiments is mainly due to the smooth potential energy surface of CNTs with high quality of graphitic walls. In order to carry out a systematic study on pressure-driven gas transport in HNPCs, a computationally efficient reflecting particle method (RPM) together with a perturbation-relaxation loop was developed in this work to make the pressure drop

  19. Functional structure of the somatomedin B domain of vitronectin.

    Science.gov (United States)

    Zhou, Aiwu

    2007-07-01

    The N-terminal somatomedin B domain (SMB) of vitronectin binds PAI-1 and the urokinase receptor with high affinity and regulates tumor cell adhesion and migration. We have shown previously in the crystal structure of the PAI-1/SMB complex that SMB, a peptide of 51 residues, is folded as a compact cysteine knot of four pairs of crossed disulfide bonds. However, the physiological significance of this structure was questioned by other groups, who disputed the disulfide bonding shown in the crystal structure (Cys5-Cys21, Cys9-Cys39, Cys19-Cys32, Cys25-Cys31), notably claiming that the first disulfide is Cys5-Cys9 rather than the Cys5-Cys21 bonding shown in the structure. To test if the claimed Cys5-Cys9 bond does exist in the SMB domain of plasma vitronectin, we purified mouse and rat plasma vitronectin that have a Met (hence cleavable by cyanogen bromide) at residue 14, and also prepared recombinant human SMB variants from insect cells with residues Asn14 or Leu24 mutated to Met. HPLC and mass spectrometry analysis showed that, after cyanogen bromide digestion, all the fragments of the SMB derived from mouse or rat vitronectin or the recombinant SMB mutants are still linked together by disulfides, and the N-terminal peptide (residue 1-14 or 1-24) can only be released when the disulfide bonds are broken. This clearly demonstrates that Cys5 and Cys9 of SMB do not form a disulfide bond in vivo, and together with other structural evidence confirms that the only functional structure of the SMB domain of plasma vitronectin is that seen in its crystallographic complex with PAI-1.

  20. 3D NEAREST NEIGHBOUR SEARCH USING A CLUSTERED HIERARCHICAL TREE STRUCTURE

    Directory of Open Access Journals (Sweden)

    A. Suhaibah

    2016-06-01

    Full Text Available Locating and analysing the location of new stores or outlets is one of the common issues facing retailers and franchisers. This is due to assure that new opening stores are at their strategic location to attract the highest possible number of customers. Spatial information is used to manage, maintain and analyse these store locations. However, since the business of franchising and chain stores in urban areas runs within high rise multi-level buildings, a three-dimensional (3D method is prominently required in order to locate and identify the surrounding information such as at which level of the franchise unit will be located or is the franchise unit located is at the best level for visibility purposes. One of the common used analyses used for retrieving the surrounding information is Nearest Neighbour (NN analysis. It uses a point location and identifies the surrounding neighbours. However, with the immense number of urban datasets, the retrieval and analysis of nearest neighbour information and their efficiency will become more complex and crucial. In this paper, we present a technique to retrieve nearest neighbour information in 3D space using a clustered hierarchical tree structure. Based on our findings, the proposed approach substantially showed an improvement of response time analysis compared to existing approaches of spatial access methods in databases. The query performance was tested using a dataset consisting of 500,000 point locations building and franchising unit. The results are presented in this paper. Another advantage of this structure is that it also offers a minimal overlap and coverage among nodes which can reduce repetitive data entry.

  1. Scalable synthesis of hierarchically structured carbon nanotube-graphene fibres for capacitive energy storage.

    Science.gov (United States)

    Yu, Dingshan; Goh, Kunli; Wang, Hong; Wei, Li; Jiang, Wenchao; Zhang, Qiang; Dai, Liming; Chen, Yuan

    2014-07-01

    Micro-supercapacitors are promising energy storage devices that can complement or even replace batteries in miniaturized portable electronics and microelectromechanical systems. Their main limitation, however, is the low volumetric energy density when compared with batteries. Here, we describe a hierarchically structured carbon microfibre made of an interconnected network of aligned single-walled carbon nanotubes with interposed nitrogen-doped reduced graphene oxide sheets. The nanomaterials form mesoporous structures of large specific surface area (396 m(2) g(-1)) and high electrical conductivity (102 S cm(-1)). We develop a scalable method to continuously produce the fibres using a silica capillary column functioning as a hydrothermal microreactor. The resultant fibres show a specific volumetric capacity as high as 305 F cm(-3) in sulphuric acid (measured at 73.5 mA cm(-3) in a three-electrode cell) or 300 F cm(-3) in polyvinyl alcohol (PVA)/H(3)PO(4) electrolyte (measured at 26.7 mA cm(-3) in a two-electrode cell). A full micro-supercapacitor with PVA/H(3)PO(4) gel electrolyte, free from binder, current collector and separator, has a volumetric energy density of ∼6.3 mWh cm(-3) (a value comparable to that of 4 V-500 µAh thin-film lithium batteries) while maintaining a power density more than two orders of magnitude higher than that of batteries, as well as a long cycle life. To demonstrate that our fibre-based, all-solid-state micro-supercapacitors can be easily integrated into miniaturized flexible devices, we use them to power an ultraviolet photodetector and a light-emitting diode.

  2. MODEM: a multi-agent hierarchical structure to model the human motor control system.

    Science.gov (United States)

    Emadi Andani, Mehran; Bahrami, Fariba; Jabehdar Maralani, Parviz; Ijspeert, Auke Jan

    2009-12-01

    In this study, based on behavioral and neurophysiological facts, a new hierarchical multi-agent architecture is proposed to model the human motor control system. Performance of the proposed structure is investigated by simulating the control of sit to stand movement. To develop the model, concepts of mixture of experts, modular structure, and some aspects of equilibrium point hypothesis were brought together. We have called this architecture MODularized Experts Model (MODEM). Human motor system is modeled at the joint torque level and the role of the muscles has been embedded in the function of the joint compliance characteristics. The input to the motor system, i.e., the central command, is the reciprocal command. At the lower level, there are several experts to generate the central command to control the task according to the details of the movement. The number of experts depends on the task to be performed. At the higher level, a "gate selector" block selects the suitable subordinate expert considering the context of the task. Each expert consists of a main controller and a predictor as well as several auxiliary modules. The main controller of an expert learns to control the performance of a given task by generating appropriate central commands under given conditions and/or constraints. The auxiliary modules of this expert learn to scrutinize the generated central command by the main controller. Auxiliary modules increase their intervention to correct the central command if the movement error is increased due to an external disturbance. Each auxiliary module acts autonomously and can be interpreted as an agent. Each agent is responsible for one joint and, therefore, the number of the agents of each expert is equal to the number of joints. Our results indicate that this architecture is robust against external disturbances, signal-dependent noise in sensory information, and changes in the environment. We also discuss the neurophysiological and behavioral basis of

  3. Scalable synthesis of hierarchically structured carbon nanotube-graphene fibres for capacitive energy storage

    Science.gov (United States)

    Yu, Dingshan; Goh, Kunli; Wang, Hong; Wei, Li; Jiang, Wenchao; Zhang, Qiang; Dai, Liming; Chen, Yuan

    2014-07-01

    Micro-supercapacitors are promising energy storage devices that can complement or even replace batteries in miniaturized portable electronics and microelectromechanical systems. Their main limitation, however, is the low volumetric energy density when compared with batteries. Here, we describe a hierarchically structured carbon microfibre made of an interconnected network of aligned single-walled carbon nanotubes with interposed nitrogen-doped reduced graphene oxide sheets. The nanomaterials form mesoporous structures of large specific surface area (396 m2 g-1) and high electrical conductivity (102 S cm-1). We develop a scalable method to continuously produce the fibres using a silica capillary column functioning as a hydrothermal microreactor. The resultant fibres show a specific volumetric capacity as high as 305 F cm-3 in sulphuric acid (measured at 73.5 mA cm-3 in a three-electrode cell) or 300 F cm-3 in polyvinyl alcohol (PVA)/H3PO4 electrolyte (measured at 26.7 mA cm-3 in a two-electrode cell). A full micro-supercapacitor with PVA/H3PO4 gel electrolyte, free from binder, current collector and separator, has a volumetric energy density of ~6.3 mWh cm-3 (a value comparable to that of 4 V-500 µAh thin-film lithium batteries) while maintaining a power density more than two orders of magnitude higher than that of batteries, as well as a long cycle life. To demonstrate that our fibre-based, all-solid-state micro-supercapacitors can be easily integrated into miniaturized flexible devices, we use them to power an ultraviolet photodetector and a light-emitting diode.

  4. Are watershed and lacustrine controls on planktonic N2 fixation hierarchically structured?

    Science.gov (United States)

    Scott, J Thad; Doyle, Robert D; Prochnow, Shane J; White, Joseph D

    2008-04-01

    N2 fixation can be an important source of N to limnetic ecosystems and can influence the structure of phytoplankton communities. However, watershed-scale conditions that favor N2 fixation in lakes and reservoirs have not been well studied. We measured N2 fixation and lacustrine variables monthly over a 19-month period in Waco Reservoir, Texas, USA, and linked these data with nutrient-loading estimates from a physically based watershed model. Readily available topographic, soil, land cover, effluent discharge, and climate data were used in the Soil and Water Assessment Tool (SWAT) to derive watershed nutrient-loading estimates. Categorical and regression tree (CART) analysis revealed that lacustrine and watershed correlates of N2 fixation were hierarchically structured. Lacustrine conditions showed greater predictive capability temporally. For instance, low NO3(-) concentration (27 degrees C) in the reservoir were correlated with the initiation of N2 fixation seasonally. When lacustrine conditions were favorable for N2 fixation, watershed conditions appeared to influence spatial patterns of N2 fixation within the reservoir. For example, spatially explicit patterns of N2 fixation were correlated with the ratio of N:P in nutrient loadings and the N loading rate, which were driven by anthropogenic activity in the watershed and periods of low stream flow, respectively. Although N2 fixation contributed <5% of the annual N load to the reservoir, 37% of the N load was derived from atmospheric N2 fixation during summertime when stream flow in the watershed was low. This study provides evidence that watershed anthropogenic activity can exert control on planktonic N2 fixation, but that temporality is controlled by lacustrine conditions. Furthermore, this study also supports suggestions that reduced inflows may increase the propensity of N2-fixing cyanobacterial blooms in receiving waters of anthropogenically modified landscapes.

  5. Organosilane with gemini-type structure as the mesoporogen for synthesis of hierarchical porous ZSM-5 zeolite

    KAUST Repository

    Zhu, Haibo

    2016-02-08

    A new kind of organosilane (1,6-bis (diethyl(3-trimethoxysilylpropyl)ammonium) hexane bromide) with a gemini-type structure was prepared and used as a mesoporogen for the synthesis of hierarchical porous ZSM-5 zeolite. There are two quaternary ammonium centers along with double hydrolysable -RSi(OMe)3 fragments in the organosilane, which results in a strong interaction between this mesoporogen and silica-alumina gel. The organosilane can be easily incorporated into ZSM-5 zeolite structure during the crystallization process, and it was finally removed by calcination leading to secondary pores in ZSM-5. The synthesized ZSM-5 has been systematically studied by XRD, nitrogen adsorption, SEM, TEM, TG and solid-state one-dimensional (1D) and two-dimensional (2D) NMR, which reveals information on its detailed structure. It has a hierarchical porosity system, which combines the intrinsic micropores coming from the crystalline structure and irregular mesopores created by the organosilane template. Moreover, the mesoposity including pore size and volume within ZSM-5 can be systematically tuned by changing the organosilane/TEOS ratios, which confirms this organosilane has high flexibility of using as template for the synthesis of hierarchical porous zeolite.

  6. Structure and functional relevance of the Slit2 homodimerization domain.

    Science.gov (United States)

    Seiradake, Elena; von Philipsborn, Anne C; Henry, Maud; Fritz, Martin; Lortat-Jacob, Hugues; Jamin, Marc; Hemrika, Wieger; Bastmeyer, Martin; Cusack, Stephen; McCarthy, Andrew A

    2009-07-01

    Slit proteins are secreted ligands that interact with the Roundabout (Robo) receptors to provide important guidance cues in neuronal and vascular development. Slit-Robo signalling is mediated by an interaction between the second Slit domain and the first Robo domain, as well as being dependent on heparan sulphate. In an effort to understand the role of the other Slit domains in signalling, we determined the crystal structure of the fourth Slit2 domain (D4) and examined the effects of various Slit2 constructs on chick retinal ganglion cell axons. Slit2 D4 forms a homodimer using the conserved residues on its concave face, and can also bind to heparan sulphate. We observed that Slit2 D4 frequently results in growth cones with collapsed lamellipodia and that this effect can be inhibited by exogenously added heparan sulphate. Our results show that Slit2 D4-heparan sulphate binding contributes to a Slit-Robo signalling mechanism more intricate than previously thought.

  7. Effects of sub-domain structure on initial magnetization curve and domain size distribution of stacked media

    Energy Technology Data Exchange (ETDEWEB)

    Sato, S., E-mail: 231504@gmail.com; Kumagai, S.; Sugita, R.

    2015-03-01

    In this paper, in order to confirm the sub-domain structure in stacked media demagnetized with in-plane field, initial magnetization curves and magnetic domain size distribution were investigated. Both experimental and simulation results showed that an initial magnetization curve for the medium demagnetized with in-plane field (MDI) initially rose faster than that for the medium demagnetized with perpendicular field (MDP). It is inferred that this is because the MDI has a larger number of domain walls than the MDP due to the existence of the sub-domains, resulting in an increase in the probability of domain wall motion. Dispersion of domain size for the MDI was larger than that for the MDP. This is because sub-domains are formed not only inside the domain but also at the domain boundary region, and they change the position of the domain boundary to affect the domain size. - Highlights: • An initial magnetization curve for MDI initially rose faster than that for MDP. • Dispersion of domain size for the MDI was larger than that for the MDP. • Experimental and simulation results can be explained by existence of sub-domains.

  8. Hierarchical Structure of the Eysenck Personality Inventory in a Large Population Sample: Goldberg's Trait-Tier Mapping Procedure.

    Science.gov (United States)

    Chapman, Benjamin P; Weiss, Alexander; Barrett, Paul; Duberstein, Paul

    2013-03-01

    The structure of the Eysenck Personality Inventory (EPI) is poorly understood, and applications have mostly been confined to the broad Neuroticism, Extraversion, and Lie scales. Using a hierarchical factoring procedure, we mapped the sequential differentiation of EPI scales from broad, molar factors to more specific, molecular factors, in a UK population sample of over 6500 persons. Replicable facets at the lowest tier of Neuroticism included emotional fragility, mood lability, nervous tension, and rumination. The lowest order set of replicable Extraversion facets consisted of social dynamism, sociotropy, decisiveness, jocularity, social information seeking, and impulsivity. The Lie scale consisted of an interpersonal virtue and a behavioral diligence facet. Users of the EPI may be well served in some circumstances by considering its broad Neuroticism, Extraversion, and Lie scales as multifactorial, a feature that was explicitly incorporated into subsequent Eysenck inventories and is consistent with other hierarchical trait structures.

  9. Hierarchical structure and modules in the Escherichia coli transcriptional regulatory network revealed by a new top-down approach

    Directory of Open Access Journals (Sweden)

    Buer Jan

    2004-12-01

    Full Text Available Abstract Background Cellular functions are coordinately carried out by groups of genes forming functional modules. Identifying such modules in the transcriptional regulatory network (TRN of organisms is important for understanding the structure and function of these fundamental cellular networks and essential for the emerging modular biology. So far, the global connectivity structure of TRN has not been well studied and consequently not applied for the identification of functional modules. Moreover, network motifs such as feed forward loop are recently proposed to be basic building blocks of TRN. However, their relationship to functional modules is not clear. Results In this work we proposed a top-down approach to identify modules in the TRN of E. coli. By studying the global connectivity structure of the regulatory network, we first revealed a five-layer hierarchical structure in which all the regulatory relationships are downward. Based on this regulatory hierarchy, we developed a new method to decompose the regulatory network into functional modules and to identify global regulators governing multiple modules. As a result, 10 global regulators and 39 modules were identified and shown to have well defined functions. We then investigated the distribution and composition of the two basic network motifs (feed forward loop and bi-fan motif in the hierarchical structure of TRN. We found that most of these network motifs include global regulators, indicating that these motifs are not basic building blocks of modules since modules should not contain global regulators. Conclusion The transcriptional regulatory network of E. coli possesses a multi-layer hierarchical modular structure without feedback regulation at transcription level. This hierarchical structure builds the basis for a new and simple decomposition method which is suitable for the identification of functional modules and global regulators in the transcriptional regulatory network of E

  10. Fractal image perception provides novel insights into hierarchical cognition.

    Science.gov (United States)

    Martins, M J; Fischmeister, F P; Puig-Waldmüller, E; Oh, J; Geissler, A; Robinson, S; Fitch, W T; Beisteiner, R

    2014-08-01

    Hierarchical structures play a central role in many aspects of human cognition, prominently including both language and music. In this study we addressed hierarchy in the visual domain, using a novel paradigm based on fractal images. Fractals are self-similar patterns generated by repeating the same simple rule at multiple hierarchical levels. Our hypothesis was that the brain uses different resources for processing hierarchies depending on whether it applies a "fractal" or a "non-fractal" cognitive strategy. We analyzed the neural circuits activated by these complex hierarchical patterns in an event-related fMRI study of 40 healthy subjects. Brain activation was compared across three different tasks: a similarity task, and two hierarchical tasks in which subjects were asked to recognize the repetition of a rule operating transformations either within an existing hierarchical level, or generating new hierarchical levels. Similar hierarchical images were generated by both rules and target images were identical. We found that when processing visual hierarchies, engagement in both hierarchical tasks activated the visual dorsal stream (occipito-parietal cortex, intraparietal sulcus and dorsolateral prefrontal cortex). In addition, the level-generating task specifically activated circuits related to the integration of spatial and categorical information, and with the integration of items in contexts (posterior cingulate cortex, retrosplenial cortex, and medial, ventral and anterior regions of temporal cortex). These findings provide interesting new clues about the cognitive mechanisms involved in the generation of new hierarchical levels as required for fractals.

  11. Controllable preparation of hierarchically core–shell structure NiO/C microspheres for non-enzymatic glucose sensor

    Energy Technology Data Exchange (ETDEWEB)

    Cui, Zhenzhen; Yin, Haoyong; Nie, Qiulin, E-mail: nieqiulin@hdu.edu.cn

    2015-05-25

    Highlights: • Hierarchically core–shell structure NiO/C microspheres were prepared. • The NiO/C microspheres were obtained via layer-by-layer assembly methods. • The NiO/C sensor shows excellent performance in glucose detection. • Good stability and anti-interference were also obtained on the NiO/C sensor. - Abstract: Hierarchically core–shell structure NiO/C microspheres were controllably fabricated with a facile hydrothermal method via layer-by-layer assembly. The single-/double-/triple-/quadri-shelled NiO/C microspheres were characterized by scanning electron microscope (SEM), transmission electron microscope (TEM), X-ray diffraction (XRD), and energy dispersive X-ray spectroscopy (EDX). The results showed that the NiO/C composites are flower-like hierarchically structured microspheres composed of the interconnecting porous nanoplates with the thickness of about 50 nm. Every nanoplate is assembled by NiO nanoparticles with diameter about 10 nm. All the multi-shelled NiO/C microspheres show high electro-catalytic activity toward the oxidation of glucose. The double-shelled NiO/C glucose sensor exhibits the best performance with a much wider linear range of 2 μM–1.279 mM, higher sensitivity of 30.19 mA mM{sup −1} cm{sup −2} and lower detection limit of 2 μM. Importantly, long-term stability and favorable anti-interference were obtained thanks to the hierarchically core–shell structure.

  12. Novel nanocomposite hydrogels consisting of layered double hydroxide with ultrahigh tensibility and hierarchical porous structure at low inorganic content.

    Science.gov (United States)

    Hu, Ziqiao; Chen, Guangming

    2014-09-10

    A novel type of polymer nanocomposite (NC) hydrogel with extraordinary mechanical properties at low inorganic content is prepared and investigated. The NC hydrogels consist of isethionate-loaded layered double hydroxide/polyacrylamide (LDH-Ise/PAM) - with LDH-Ise being used because of its swelling properties - and no conventional organic crosslinker. The NC hydrogels exhibit an unusual hierarchical porous structure at the micro- and nanometer scales, and their elongation at break can exceed 4000%.

  13. APPLICATION OF NEURAL NETWORK WITH MULTI-HIERARCHIC STRUCTURE TO EVALUATE SUSTAINABLE DEVELOPMENT OF THE COAL MINES

    Institute of Scientific and Technical Information of China (English)

    李新春; 陶学禹

    2000-01-01

    The neural network with multi-hierarchic structure is provided in this paper to evaluate sustainable development of the coal mines based on analyzing its effect factors. The whole evaluating system is composed of 5 neural networks.The feasibility of this method has been proved by case study. This study will provide a scientfic and theoretic foundation for evaluating the sustainable development of coal mines.

  14. A High-Transmission, Multiple Antireflective Surface Inspired from Bilayer 3D Ultrafine Hierarchical Structures in Butterfly Wing Scales.

    Science.gov (United States)

    Han, Zhiwu; Mu, Zhengzhi; Li, Bo; Niu, Shichao; Zhang, Junqiu; Ren, Luquan

    2016-02-10

    A high-transmission, multiple antireflective surface inspired by bilayer 3D ultrafine hierarchical structures in butterfly wing scales is fabricated on a glass substrate using wet chemical biomimetic fabrication. Interestingly, the biomimetic antireflective surface exhibits excellent antireflective properties and high transmission, which provides better characteristics than the butterfly wings and can significantly reduce reflection without losing transparency. These findings offer a new path for generating nanostructured antireflectors with high transmission properties.

  15. Structural basis for NHERF1 PDZ domain binding.

    Science.gov (United States)

    Mamonova, Tatyana; Kurnikova, Maria; Friedman, Peter A

    2012-04-10

    The Na(+)/H(+) exchange regulatory factor-1 (NHERF1) is a scaffolding protein that possesses two tandem PDZ domains and a carboxy-terminal ezrin-binding domain (EBD). The parathyroid hormone receptor (PTHR), type II sodium-dependent phosphate cotransporter (Npt2a), and β2-adrenergic receptor (β2-AR), through their respective carboxy-terminal PDZ-recognition motifs, individually interact with NHERF1 forming a complex with one of the PDZ domains. In the basal state, NHERF1 adopts a self-inhibited conformation, in which its carboxy-terminal PDZ ligand interacts with PDZ2. We applied molecular dynamics (MD) simulations to uncover the structural and biochemical basis for the binding selectivity of NHERF1 PDZ domains. PDZ1 uniquely forms several contacts not present in PDZ2 that further stabilize PDZ1 interactions with target ligands. The binding free energy (ΔG) of PDZ1 and PDZ2 with the carboxy-terminal, five-amino acid residues that form the PDZ-recognition motif of PTHR, Npt2a, and β2-AR was calculated and compared with the calculated ΔG for the self-association of NHERF1. The results suggest that the interaction of the PTHR, β2-adrenergic, and Npt2a involves competition between NHERF1 PDZ domains and the target proteins. The binding of PDZ2 with PTHR may also compete with the self-inhibited conformation of NHERF1, thereby contributing to the stabilization of an active NHERF1 conformation. © 2012 American Chemical Society

  16. Hydrothermal deposition and photochromic performances of three kinds of hierarchical structure arrays of WO{sub 3} thin films

    Energy Technology Data Exchange (ETDEWEB)

    Ding, Defang; Shen, Yi, E-mail: sysy7373@163.com; Ouyang, Yali; Li, Zhen

    2012-10-01

    Three kinds of tungsten oxide (WO{sub 3}) thin films have been fabricated by a simple hydrothermal deposition method. Scanning electron microscopy images of the products revealed that the capping agents did impact the microstructure of WO{sub 3} films. Films prepared without capping agents were ordered nanorod arrays, while the ones obtained with ethanol and oxalic acid revealed peeled-orange-like and cauliflower-like hierarchical structure arrays, respectively. Both of the two hierarchical structures were composed of much thinner nanorods compared with the one obtained without capping agents. All the WO{sub 3} films exhibited good photochromic properties and the two with inducers performed even better, which could be due to the changes in the microstructure that increased the amount of photogenerated electron-hole pairs and the proton diffusion rates. - Highlights: Black-Right-Pointing-Pointer Ordered WO{sub 3} nanorod arrays were prepared by hydrothermal deposition process. Black-Right-Pointing-Pointer Two hierarchical WO{sub 3} structure arrays were obtained with ethanol and oxalic acid. Black-Right-Pointing-Pointer Mechanism for the improved photochromic performances of WO{sub 3} films is proposed.

  17. One-Step Fabrication of Hierarchically Structured Silicon Surfaces and Modification of Their Morphologies Using Sacrificial Layers

    Directory of Open Access Journals (Sweden)

    Seong J. Cho

    2013-01-01

    Full Text Available Fabrication of one-dimensional nanostructures is a key issue for optical devices, fluidic devices, and solar cells because of their unique functionalities such as antireflection and superhydrophobicity. Here, we report a novel one-step process to fabricate patternable hierarchical structures consisting of microstructures and one-dimensional nanostructures using a sacrificial layer. The layer plays a role as not only a micromask for producing microstructures but also as a nanomask for nanostructures according to the etching time. Using this method, we fabricated patterned hierarchical structures, with the ability to control the shape and density of the nanostructure. The various architectures provided unique functionalities. For example, our sacrificial-layer etching method allowed nanostructures denser than what would be attainable with conventional processes to form. The dense nanostructure resulted in a very low reflectance of the silicon surface (less than 1%. The nanostructured surface and hierarchically structured surface also exhibited excellent antiwetting properties, with a high contact angle (>165° and low sliding angle (<1°. We believe that our fabrication approach will provide new insight into functional surfaces, such as those used for antiwetting and antireflection surface applications.

  18. Page Layout Analysis of the Document Image Based on the Region Classification in a Decision Hierarchical Structure

    Directory of Open Access Journals (Sweden)

    Hossein Pourghassem

    2010-10-01

    Full Text Available The conversion of document image to its electronic version is a very important problem in the saving, searching and retrieval application in the official automation system. For this purpose, analysis of the document image is necessary. In this paper, a hierarchical classification structure based on a two-stage segmentation algorithm is proposed. In this structure, image is segmented using the proposed two-stage segmentation algorithm. Then, the type of the image regions such as document and non-document image is determined using multiple classifiers in the hierarchical classification structure. The proposed segmentation algorithm uses two algorithms based on wavelet transform and thresholding. Texture features such as correlation, homogeneity and entropy that extracted from co-occurrenc matrix and also two new features based on wavelet transform are used to classifiy and lable the regions of the image. The hierarchical classifier is consisted of two Multilayer Perceptron (MLP classifiers and a Support Vector Machine (SVM classifier. The proposed algorithm is evaluated on a database consisting of document and non-document images that provides from Internet. The experimental results show the efficiency of the proposed approach in the region segmentation and classification. The proposed algorithm provides accuracy rate of 97.5% on classification of the regions.

  19. Impact of cell shape in hierarchically structured plant surfaces on the attachment of male Colorado potato beetles (Leptinotarsa decemlineata

    Directory of Open Access Journals (Sweden)

    Bettina Prüm

    2012-01-01

    Full Text Available Plant surfaces showing hierarchical structuring are frequently found in plant organs such as leaves, petals, fruits and stems. In our study we focus on the level of cell shape and on the level of superimposed microstructuring, leading to hierarchical surfaces if both levels are present. While it has been shown that epicuticular wax crystals and cuticular folds strongly reduce insect attachment, and that smooth papillate epidermal cells in petals improve the grip of pollinators, the impact of hierarchical surface structuring of plant surfaces possessing convex or papillate cells on insect attachment remains unclear. We performed traction experiments with male Colorado potato beetles on nine different plant surfaces with different structures. The selected plant surfaces showed epidermal cells with either tabular, convex or papillate cell shape, covered either with flat films of wax, epicuticular wax crystals or with cuticular folds. On surfaces possessing either superimposed wax crystals or cuticular folds we found traction forces to be almost one order of magnitude lower than on surfaces covered only with flat films of wax. Independent of superimposed microstructures we found that convex and papillate epidermal cell shapes slightly enhance the attachment ability of the beetles. Thus, in plant surfaces, cell shape and superimposed microstructuring yield contrary effects on the attachment of the Colorado potato beetle, with convex or papillate cells enhancing attachment and both wax crystals or cuticular folds reducing attachment. However, the overall magnitude of traction force mainly depends on the presence or absence of superimposed microstructuring.

  20. Structural eigenfrequency optimization based on local sub-domain "frequencies"

    DEFF Research Database (Denmark)

    Pedersen, Pauli; Pedersen, Niels Leergaard

    2013-01-01

    The engineering approach of fully stressed design is a practical tool with a theoretical foundation. The analog approach to structural eigenfrequency optimization is presented here with its theoretical foundation. A numerical redesign procedure is proposed and illustrated with examples.......For the ideal case, an optimality criterion is fulfilled if the design have the same sub-domain ”frequency” (local Rayleigh quotient). Sensitivity analysis shows an important relation between squared system eigenfrequency and squared local sub-domain frequency for a given eigenmode. Higher order...... eigenfrequencies may also be controlled in this manner.The presented examples are based on 2D finite element models with the use of subspace iteration for analysis and a recursive design procedure based on the derived optimality condition. The design that maximize a frequency depend on the total amount...

  1. Crystal Structure of the Marburg Virus VP35 Oligomerization Domain

    Energy Technology Data Exchange (ETDEWEB)

    Bruhn, Jessica F.; Kirchdoerfer, Robert N.; Urata, Sarah M.; Li, Sheng; Tickle, Ian J.; Bricogne, Gérard; Saphire, Erica Ollmann (Scripps); (Globel Phasing); (UCSD)

    2016-11-09

    ABSTRACT

    Marburg virus (MARV) is a highly pathogenic filovirus that is classified in a genus distinct from that of Ebola virus (EBOV) (generaMarburgvirusandEbolavirus, respectively). Both viruses produce a multifunctional protein termed VP35, which acts as a polymerase cofactor, a viral protein chaperone, and an antagonist of the innate immune response. VP35 contains a central oligomerization domain with a predicted coiled-coil motif. This domain has been shown to be essential for RNA polymerase function. Here we present crystal structures of the MARV VP35 oligomerization domain. These structures and accompanying biophysical characterization suggest that MARV VP35 is a trimer. In contrast, EBOV VP35 is likely a tetramer in solution. Differences in the oligomeric state of this protein may explain mechanistic differences in replication and immune evasion observed for MARV and EBOV.

    IMPORTANCEMarburg virus can cause severe disease, with up to 90% human lethality. Its genome is concise, only producing seven proteins. One of the proteins, VP35, is essential for replication of the viral genome and for evasion of host immune responses. VP35 oligomerizes (self-assembles) in order to function, yet the structure by which it assembles has not been visualized. Here we present two crystal structures of this oligomerization domain. In both structures, three copies of VP35 twist about each other to form a coiled coil. This trimeric assembly is in contrast to tetrameric predictions for VP35 of Ebola virus and to known structures of homologous proteins in the measles, mumps, and Nipah viruses. Distinct oligomeric states of the Marburg and Ebola virus VP35 proteins may explain differences between them in polymerase function and immune evasion. These findings may provide a more accurate understanding of the

  2. Osteogenic activity of titanium surfaces with hierarchical micro-/nano-structures obtained by hydrofluoric acid treatment

    Science.gov (United States)

    Liang, Jianfei; Xu, Shanshan; Shen, Mingming; Cheng, Bingkun; Li, Yongfeng; Liu, Xiangwei; Qin, Dongze; Bellare, Anuj; Kong, Liang

    2017-01-01

    An easier method for constructing the hierarchical micro-/nano-structures on the surface of dental implants in the clinic is needed. In this study, three different titanium surfaces with microscale grooves (width 0.5–1, 1–1.5, and 1.5–2 μm) and nanoscale nanoparticles (diameter 20–30, 30–50, and 50–100 nm, respectively) were obtained by treatment with different concentrations of hydrofluoric acid (HF) and at different etching times (1%, 3 min; 0.5%, 12 min; and 1.5%, 12 min, respectively; denoted as groups HF1, HF2, and HF3). The biological response to the three different titanium surfaces was evaluated by in vitro human bone marrow-derived mesenchymal stem cell (hBMMSC) experiments and in vivo animal experiments. The results showed that cell adhesion, proliferation, alkaline phosphatase activity, and mineralization of hBMMSCs were increased in the HF3 group. After the different surface implants were inserted into the distal femurs of 40 rats, the bone–implant contact in groups HF1, HF2, and HF3 was 33.17%±2.2%, 33.82%±3.42%, and 41.04%±3.08%, respectively. Moreover, the maximal pullout force in groups HF1, HF2, and HF3 was 57.92±2.88, 57.83±4.09, and 67.44±6.14 N, respectively. The results showed that group HF3 with large micron grooves (1.5–2.0 μm) and large nanoparticles (50–100 nm) showed the best bio-functionality for the hBMMSC response and osseointegration in animal experiments compared with other groups.

  3. Phase-Controlled Iron Oxide Nanobox Deposited on Hierarchically Structured Graphene Networks for Lithium Ion Storage and Photocatalysis

    Science.gov (United States)

    Yun, Sol; Lee, Young-Chul; Park, Ho Seok

    2016-01-01

    The phase control, hierarchical architecturing and hybridization of iron oxide is important for achieving multifunctional capability for many practical applications. Herein, hierarchically structured reduced graphene oxide (hrGO)/α-Fe2O3 and γ-Fe3O4 nanobox hybrids (hrGO/α-Fe and hrGO/γ-Fe NBhs) are synthesized via a one-pot, hydrothermal process and their functionality controlled by the crystalline phases is adapted for energy storage and photocatalysis. The three-dimensionally (3D) macroporous structure of hrGO/α-Fe NBhs is constructed, while α-Fe2O3 nanoboxes (NBs) in a proximate contact with the hrGO surface are simultaneously grown during a hydrothermal treatment. The discrete α-Fe2O3 NBs are uniformly distributed on the surface of the hrGO/α-Fe and confined in the 3D architecture, thereby inhibiting the restacking of rGO. After the subsequent phase transition into γ-Fe3O4, the hierarchical structure and the uniform distribution of NBs are preserved. Despite lower initial capacity, the hrGO/α-Fe NBhs show better rate and cyclic performances than those of commercial rGO/α-Fe due to the uniform distribution of discrete α-Fe2O3 NBs and electronic conductivity, macroporosity, and buffering effect of the hrGO for lithium ion battery anodes. Moreover, the catalytic activity and kinetics of hrGO/γ-Fe NBhs are enhanced for photo-Fenton reaction because of the uniform distribution of discrete γ-Fe3O4 NBs on the 3D hierarchical architecture.

  4. Three-dimensional nanotube electrode arrays for hierarchical tubular structured high-performance pseudocapacitors

    Science.gov (United States)

    Gao, Yuan; Lin, Yuanjing; Chen, Jiaqi; Lin, Qingfeng; Wu, Yue; Su, Wenjun; Wang, Wenli; Fan, Zhiyong

    2016-07-01

    Ordered three-dimensional (3-D) tubular arrays are highly attractive candidates for high performance pseudocapacitor electrodes. Here, we report 3-D fluorine doped tin oxide (FTO) tubular arrays fabricated by a cost-effective ultrasonic spray pyrolysis (USP) method in anodic aluminum oxide (AAO) channels with high uniformity. The large surface area of such a structure leads to remarkable surface area enhancement up to 51.8 times compared to a planar structure. Combining with electrochemically deposited manganese dioxide (MnO2) nanoflakes on the inner side wall of the FTO nanotubes, the unique hierarchical tubular structured pseudocapacitor electrode demonstrated the highest areal capacitance of 193.8 mF cm-2 at the scan rate of 5 mV s-1 and 184 mF cm-2 at the discharge current density of 0.6 mA cm-2, which is 18.5 times that of a planar electrode. And it also showed a volumetric capacitance of 112.6 F cm-3 at the scan rate of 5 mV s-1 and 108.8 F cm-3 at the discharge current density of 0.6 mA cm-2. In addition, the cyclic stability test also indicated that a nanostructured pseudocapacitive electrode has a much larger capacitance retention after 3000 cycles of the charge-discharge process compared with a planar electrode, primarily due to the mechanical stability of the nanostructure. Moreover, pseudocapacitor device fabrication based on such electrodes shows the volumetric capacitance of 17.5 F cm-3, and the highest specific energy of 1.56 × 10-3 Wh cm-3. With the merit of facile fabrication procedures and largely enhanced electrochemical performance, such a 3-D structure has high potency for energy storage systems for a wide range of practical applications.Ordered three-dimensional (3-D) tubular arrays are highly attractive candidates for high performance pseudocapacitor electrodes. Here, we report 3-D fluorine doped tin oxide (FTO) tubular arrays fabricated by a cost-effective ultrasonic spray pyrolysis (USP) method in anodic aluminum oxide (AAO) channels with

  5. Crystal structure of the bacteriophage P2 integrase catalytic domain.

    Science.gov (United States)

    Skaar, Karin; Claesson, Magnus; Odegrip, Richard; Högbom, Martin; Haggård-Ljungquist, Elisabeth; Stenmark, Pål

    2015-11-30

    Bacteriophage P2 is a temperate phage capable of integrating its DNA into the host genome by site-specific recombination upon lysogenization. Integration and excision of the phage genome requires P2 integrase, which performs recognition, cleavage and joining of DNA during these processes. This work presents the high-resolution crystal structure of the catalytic domain of P2 integrase, and analysis of the structure-function relationship of several previously identified non-functional P2 integrase mutants. The DNA binding area is characterized by a large positively charged patch, harboring key residues. The structure reveals potential for large dimer flexibility, likely essential for rearrangement of DNA strands upon integration and excision of the phage DNA.

  6. Hierarchical α-Fe2O3/NiO composites with a hollow structure for a gas sensor.

    Science.gov (United States)

    Wang, Chen; Cheng, Xiaoyang; Zhou, Xin; Sun, Peng; Hu, Xiaolong; Shimanoe, Kengo; Lu, Geyu; Yamazoe, Noboru

    2014-08-13

    Hierarchical α-Fe2O3/NiO composites with a hollow nanostructure were synthesized by a facile hydrothermal method. The structures and morphologies of the composites were investigated by different kinds of techniques, including X-ray diffraction, field-emission electron scanning microscopy, transmission electron microscopy, and energy dispersive spectroscopy. Hierarchical α-Fe2O3/NiO composites were fabricated by growing the α-Fe2O3 nanorods on the surfaces of porous NiO nanosheets with a thickness of ∼12 nm. The gas sensing properties of hierarchical α-Fe2O3/NiO composites toward toluene were investigated using a static system. The response of α-Fe2O3/NiO composites to 100 ppm toluene was ∼18.68, which was 13.18 times higher than that of pure NiO at 300 °C. The enhanced response can be attributed to heterojunction. Meanwhile, the rapid response and recovery characteristics were observed because of the porous hollow structural characteristics and catalytic actions of α-Fe2O3 and NiO.

  7. Structural basis of transmembrane domain interactions in integrin signaling.

    Science.gov (United States)

    Ulmer, Tobias S

    2010-01-01

    Cell surface receptors of the integrin family are pivotal to cell adhesion and migration. The activation state of heterodimeric alphabeta integrins is correlated to the association state of the single-pass alpha and beta transmembrane domains. The association of integrin alphaIIbbeta3 transmembrane domains, resulting in an inactive receptor, is characterized by the asymmetric arrangement of a straight (alphaIIb) and tilted (beta3) helix relative to the membrane in congruence to the dissociated structures. This allows for a continuous association interface centered on helix-helix glycine-packing and an unusual alphaIIb(GFF) structural motif that packs the conserved Phe-Phe residues against the beta3 transmembrane helix, enabling alphaIIb(D723)beta3(R995) electrostatic interactions. The transmembrane complex is further stabilized by the inactive ectodomain, thereby coupling its association state to the ectodomain conformation. In combination with recently determined structures of an inactive integrin ectodomain and an activating talin/beta complex that overlap with the alphabeta transmembrane complex, a comprehensive picture of integrin bi-directional transmembrane signaling has emerged.

  8. The interaction of domain knowledge and linguistic structure in natural language processing: interpreting hypernymic propositions in biomedical text.

    Science.gov (United States)

    Rindflesch, Thomas C; Fiszman, Marcelo

    2003-12-01

    Interpretation of semantic propositions in free-text documents such as MEDLINE citations would provide valuable support for biomedical applications, and several approaches to semantic interpretation are being pursued in the biomedical informatics community. In this paper, we describe a methodology for interpreting linguistic structures that encode hypernymic propositions, in which a more specific concept is in a taxonomic relationship with a more general concept. In order to effectively process these constructions, we exploit underspecified syntactic analysis and structured domain knowledge from the Unified Medical Language System (UMLS). After introducing the syntactic processing on which our system depends, we focus on the UMLS knowledge that supports interpretation of hypernymic propositions. We first use semantic groups from the Semantic Network to ensure that the two concepts involved are compatible; hierarchical information in the Metathesaurus then determines which concept is more general and which more specific. A preliminary evaluation of a sample based on the semantic group Chemicals and Drugs provides 83% precision. An error analysis was conducted and potential solutions to the problems encountered are presented. The research discussed here serves as a paradigm for investigating the interaction between domain knowledge and linguistic structure in natural language processing, and could also make a contribution to research on automatic processing of discourse structure. Additional implications of the system we present include its integration in advanced semantic interpretation processors for biomedical text and its use for information extraction in specific domains. The approach has the potential to support a range of applications, including information retrieval and ontology engineering.

  9. Solution structure of the coxsackievirus and adenovirus receptor domain 2

    OpenAIRE

    Jiang, Shaokai; Caffrey, Michael

    2007-01-01

    The coxsackievirus and adenovirus receptor (CAR) mediates entry of coxsackievirus and adenovirus. CAR possesses an extracellular region that is comprised of 2 immunoglobulin domains termed CAR–D1 and CAR–D2. In the present work, the solution structure of CAR–D2, consisting of residues 142–235 of human CAR, has been determined by NMR spectroscopy. CAR–D2 is shown to be a β-sandwich motif comprised of two β-sheets, which are stabilized by two disulfide bonds. The first β-sheet is comprised of β...

  10. Crystal Structures of the BAR-PH and PTB Domains of Human APPL1

    Energy Technology Data Exchange (ETDEWEB)

    Li,J.; Mao, X.; Dong, L.; Liu, F.; Tong, L.

    2007-01-01

    APPL1 interacts with adiponectin receptors and other important signaling molecules. It contains a BAR and a PH domain near its N terminus, and the two domains may function as a unit (BAR-PH domain). We report here the crystal structures of the BAR-PH and PTB domains of human APPL1. The structures reveal novel features for BAR domain dimerization and for the interactions between the BAR and PH domains. The BAR domain dimer of APPL1 contains two four-helical bundles, whereas other BAR domain dimers have only three helices in each bundle. The PH domain is located at the opposite ends of the BAR domain dimer. Yeast two-hybrid assays confirm the interactions between the BAR and PH domains. Lipid binding assays show that the BAR, PH, and PTB domains can bind phospholipids. The ability of APPL1 to interact with multiple signaling molecules and phospholipids supports an important role for this adaptor in cell signaling.

  11. Tailoring of the hierarchical structure within electrospun fibers due to supramolecular comb-coil block copolymers : polystyrene-block-poly(4-vinyl pyridine) plasticized by hydrogen bonded pentadecylphenol

    NARCIS (Netherlands)

    Ruotsalainen, Teemu; Turku, Jani; Hiekkataipale, Panu; Vainio, Ulla; Serimaa, Ritva; Brinke, Gerrit ten; Harlin, Ali; Ruokolainen, Janne; Ikkala, Olli

    2007-01-01

    Previously we demonstrated hierarchical self- assembly and mesoporosity in electrospun fibers using selected polystyrene- block- poly(4- vinylpyridine) (PS- b- P4VP) diblock copolymers with hydrogen- bonded 3- n- pentadecylphenol (PDP), which rendered distorted spherical P4VP(PDP)(1.0) domains

  12. Crystal structure of yeast DNA polymerase ε catalytic domain.

    Directory of Open Access Journals (Sweden)

    Rinku Jain

    Full Text Available DNA polymerase ε (Polε is a multi-subunit polymerase that contributes to genomic stability via its roles in leading strand replication and the repair of damaged DNA. Here we report the ternary structure of the Polε catalytic subunit (Pol2 bound to a nascent G:C base pair (Pol2G:C. Pol2G:C has a typical B-family polymerase fold and embraces the template-primer duplex with the palm, fingers, thumb and exonuclease domains. The overall arrangement of domains is similar to the structure of Pol2T:A reported recently, but there are notable differences in their polymerase and exonuclease active sites. In particular, we observe Ca2+ ions at both positions A and B in the polymerase active site and also observe a Ca2+ at position B of the exonuclease site. We find that the contacts to the nascent G:C base pair in the Pol2G:C structure are maintained in the Pol2T:A structure and reflect the comparable fidelity of Pol2 for nascent purine-pyrimidine and pyrimidine-purine base pairs. We note that unlike that of Pol3, the shape of the nascent base pair binding pocket in Pol2 is modulated from the major grove side by the presence of Tyr431. Together with Pol2T:A, our results provide a framework for understanding the structural basis of high fidelity DNA synthesis by Pol2.

  13. Assembly of CdS Quantum Dots onto Hierarchical TiO2 Structure for Quantum Dots Sensitized Solar Cell Applications

    OpenAIRE

    Syed Mansoor Ali; Mohamed Aslam; W. A. Farooq; Amanullah Fatehmulla; Atif, M

    2015-01-01

    Quantum dot (QD) sensitized solar cells based on Hierarchical TiO2 structure (HTS) consisting of spherical nano-urchins on transparent conductive fluorine doped tin oxide glass substrate is fabricated. The hierarchical TiO2 structure consisting of spherical nano-urchins on transparent conductive fluorine doped tin oxide glass substrate synthesized by hydrothermal route. The CdS quantum dots were grown by the successive ionic layer adsorption and reaction deposition method. The quantum dot sen...

  14. Time Domain Terahertz (T-Ray) Subsurface and Structural Imaging

    Science.gov (United States)

    Zimdars, David; White, Jeffrey S.; Stuk, G.; Chernovsky, A.; Fichter, G.; Sucha, G.; Williamson, S.

    2007-03-01

    The technology, methods, and examples of high speed time domain terahertz (T-Ray) imaging non-destructive examination (NDE) for 2 and 3 dimensional structural and material content characterization are discussed. T-Ray imaging can be utilized for non-contact transmission and/or monostatic reflection inspection of non-conductive materials such as plastics, foam, composites, ceramics, paper, wood and glass. Example subsurface homeland security images of concealed items in baggage and on personnel are shown. We tabulate attenuation and penetration characteristics through a selection of building materials, and demonstrate the ability of T-ray instrumentation to sub-surface image building structures such as wall framing and interior wiring and conduits.

  15. Bioinspired synthesis of hierarchically micro/nano-structured CuI tetrahedron and its potential application as adsorbent for Cd(II) with high removal capacity.

    Science.gov (United States)

    Gao, Shuyan; Yang, Jianmao; Li, Zhengdao; Jia, Xiaoxia; Chen, Yanli

    2012-04-15

    An environment friendly bioinspired strategy for synthesizing hierarchically micro/nano-structured CuI tetrahedron has been developed by combining the stabilization and the reduction performances of l-tryptophan together. A possible growth mechanism of such hierarchical tetrahedron is tentatively proposed. Remarkably, such CuI tetrahedron is found to possess high removal capacity for poisonous Cd(II) ions, 136.3mg/g, and ideal reusability. This is ascribed to the hierarchical micro/nano-structure and chemical adsorption mechanism, which shows great advantages over the traditional nano-scaled adsorbents. These interesting results stand out the promising applications of such hierarchically micro/nano-structured materials in environment. It is also a good example for the organic combination of green chemistry and nanotechnologies for the treatment of contaminated water.

  16. Building and Using Object-Oriented Frameworks for Semi-Structures Domains: The Sales Promotion Domain as Example

    NARCIS (Netherlands)

    A. Dalebout; J. van Hillegersberg (Jos); B. Wierenga (Berend)

    1998-01-01

    textabstractObject-oriented (00) frameworks are considered an important step forward in developing software applications efficiently. Success of frameworks has however predominantly been limited to structured domains.This paper describes a method for developing 00 domainframeworks for

  17. Mussel-inspired one-step copolymerization to engineer hierarchically structured surface with superhydrophobic properties for removing oil from water.

    Science.gov (United States)

    Huang, Shouying

    2014-10-08

    In the present study, a superhydrophobic polyurethane (PU) sponge with hierarchically structured surface, which exhibits excellent performance in absorbing oils/organic solvents, was fabricated for the first time through mussel-inspired one-step copolymerization approach. Specifically, dopamine (a small molecular bioadhesive) and n-dodecylthiol were copolymerized in an alkaline aqueous solution to generate polydopamine (PDA) nanoaggregates with n-dodecylthiol motifs on the surface of the PU sponge skeletons. Then, the superhydrophobic sponge that comprised a hierarchical structured surface similar to the chemical/topological structures of lotus leaf was fabricated. The topological structures, surface wettability, and mechanical property of the sponge were characterized by scanning electron microscopy, contact angle experiments, and compression test. Just as a result of the highly porous structure, superhydrophobic property and strong mechanical stability, this sponge exhibited desirable absorption capability of oils/organic solvents (weight gains ranging from 2494% to 8670%), suggesting a promising sorbents for the removal of oily pollutants from water. Furthermore, thanks to the nonutilization of the complicated processes or sophisticated equipment, the fabrication of the superhydrophobic sponge seemed to be quite easy to scale up. All these merits make the sponge a competitive candidate when compared to the conventional absorbents, for example, nonwoven polypropylene fabric.

  18. Production of Slit2 LRR domains in mammalian cells for structural studies and the structure of human Slit2 domain 3.

    Science.gov (United States)

    Morlot, Cecile; Hemrika, Wieger; Romijn, Roland A; Gros, Piet; Cusack, Stephen; McCarthy, Andrew A

    2007-09-01

    Slit2 and Roundabout 1 (Robo1) provide a key ligand-receptor interaction for the navigation of commissural neurons during the development of the central nervous system. Slit2 is a large multidomain protein containing an unusual domain organization of four tandem leucine-rich repeat (LRR) domains at its N-terminus. These domains are well known to mediate protein-protein interactions; indeed, the Robo1-binding region has been mapped to the concave face of the second LRR domain. It has also been shown that the fourth LRR domain may mediate Slit dimerization and that both the first and second domains can bind heparin. Thus, while roles have been ascribed for three of the LRR domains, there is still no known role for the third domain. Each of the four LRR domains from human Slit2 have now been successfully expressed in milligram quantities using expression in mammalian cells. Here, the crystallization of the second and third LRR domains and the structure of the third LRR domain are presented. This is the first structure of an LRR domain from human Slit2, which has an extra repeat compared with the Drosophila homologue. It is proposed that a highly conserved patch of surface residues on the concave face may mediate any protein-protein interactions involving this LRR domain, a result that will be useful in guiding further studies on Slit2.

  19. Synthesis of hierarchical NiO microsphere with waxberry-like structure and its enhanced lithium storage performance

    Energy Technology Data Exchange (ETDEWEB)

    Wang, Qi; Xu, Yue-Feng; Xu, Gui-Liang [Department of Chemistry, College of Chemistry and Chemical Engineering, Xiamen University, State Key Laboratory of Physical Chemistry of Solid Surfaces, Xiamen, 361005 (China); Su, Hang [College of Energy, Xiamen University, Xiamen 361005 (China); Shen, Shou-Yu; Tu, Ting-Ting [Department of Chemistry, College of Chemistry and Chemical Engineering, Xiamen University, State Key Laboratory of Physical Chemistry of Solid Surfaces, Xiamen, 361005 (China); Huang, Ling, E-mail: huangl@xmu.edu.cn [Department of Chemistry, College of Chemistry and Chemical Engineering, Xiamen University, State Key Laboratory of Physical Chemistry of Solid Surfaces, Xiamen, 361005 (China); Li, Jun-Tao [College of Energy, Xiamen University, Xiamen 361005 (China); Sun, Shi-Gang [Department of Chemistry, College of Chemistry and Chemical Engineering, Xiamen University, State Key Laboratory of Physical Chemistry of Solid Surfaces, Xiamen, 361005 (China); College of Energy, Xiamen University, Xiamen 361005 (China)

    2015-11-05

    This work reports a facile synthesis of hierarchical NiO microspheres with a waxberry-like structure by one-pot hydrothermal reaction followed by thermal annealing. We detected the composition of precursor by using two-dimensional detector X-ray diffractometer (XRD{sup 2}). In addition, XRD, TG, SEM, TEM and BET measurement were used to characterize the structural properties of the as-prepared materials. The XRD result showed that the precursor has been completely transformed into NiO materials by calcination at 300 °C (denoted as NiO-300). Moreover, thanks to the well conservation of hierarchical structure consisting of needle-like nanoparticles in NiO-300 sample, the charge capacity can be stabilized at 597.8 mAh g{sup −1} reversibly when cycled 100 times at a relatively high current density of 0.7C which show a very competitive capacity compared with other nano-structure NiO materials and commercial NiO material. It also showed high rate capability, the reversible charge capacity is still retained to 370.3 mAh g{sup −1}, even for the condition of 4.46C (high rate). This NiO-300 material's superior electrochemical performance should be exclusively attributed to the well conserved hierarchical waxberry-like structures, which shortens the diffusion pathways of lithium ions and electrons transfer as well as accommodate the drastic volume change during electrochemical charge/discharge process. - Highlights: • Hierarchical waxberry-like NiO has been synthesized by hydrothermal reaction. • Two-dimensional XRD (XRD{sup 2}) was used to ensure the composition of precursor. • The NiO-300 delivers a charge capacity of 597.8 mAh g{sup −1} cycled 100 weeks at 0.7C. • The superior electrochemical performance should be owed to waxberry-like structure.

  20. Rigorous Approach in Investigation of Seismic Structure and Source Characteristicsin Northeast Asia: Hierarchical and Trans-dimensional Bayesian Inversion

    Science.gov (United States)

    Mustac, M.; Kim, S.; Tkalcic, H.; Rhie, J.; Chen, Y.; Ford, S. R.; Sebastian, N.

    2015-12-01

    Conventional approaches to inverse problems suffer from non-linearity and non-uniqueness in estimations of seismic structures and source properties. Estimated results and associated uncertainties are often biased by applied regularizations and additional constraints, which are commonly introduced to solve such problems. Bayesian methods, however, provide statistically meaningful estimations of models and their uncertainties constrained by data information. In addition, hierarchical and trans-dimensional (trans-D) techniques are inherently implemented in the Bayesian framework to account for involved error statistics and model parameterizations, and, in turn, allow more rigorous estimations of the same. Here, we apply Bayesian methods throughout the entire inference process to estimate seismic structures and source properties in Northeast Asia including east China, the Korean peninsula, and the Japanese islands. Ambient noise analysis is first performed to obtain a base three-dimensional (3-D) heterogeneity model using continuous broadband waveforms from more than 300 stations. As for the tomography of surface wave group and phase velocities in the 5-70 s band, we adopt a hierarchical and trans-D Bayesian inversion method using Voronoi partition. The 3-D heterogeneity model is further improved by joint inversions of teleseismic receiver functions and dispersion data using a newly developed high-efficiency Bayesian technique. The obtained model is subsequently used to prepare 3-D structural Green's functions for the source characterization. A hierarchical Bayesian method for point source inversion using regional complete waveform data is applied to selected events from the region. The seismic structure and source characteristics with rigorously estimated uncertainties from the novel Bayesian methods provide enhanced monitoring and discrimination of seismic events in northeast Asia.

  1. Crystal structure of the tetrameric fibrinogen-like recognition domain of Fibrinogen C domain containing 1 (FIBCD1)

    DEFF Research Database (Denmark)

    Shrive, Annette K; Moeller, Jesper B; Burns, Ian;

    2014-01-01

    The high-resolution crystal structures of a recombinant fragment of the C-terminal fibrinogen-like recognition domain of FIBCD1, a vertebrate receptor that binds chitin, have been determined. The overall tetrameric structure shows similarity in structure and aggregation to the horseshoe crab innate...

  2. Applied Bayesian Hierarchical Methods

    CERN Document Server

    Congdon, Peter D

    2010-01-01

    Bayesian methods facilitate the analysis of complex models and data structures. Emphasizing data applications, alternative modeling specifications, and computer implementation, this book provides a practical overview of methods for Bayesian analysis of hierarchical models.

  3. Programming with Hierarchical Maps

    DEFF Research Database (Denmark)

    Ørbæk, Peter

    This report desribes the hierarchical maps used as a central data structure in the Corundum framework. We describe its most prominent features, ague for its usefulness and briefly describe some of the software prototypes implemented using the technology....

  4. Identifying Overlapping and Hierarchical Thematic Structures in Networks of Scholarly Papers: A Comparison of Three Approaches

    CERN Document Server

    Havemann, Frank; Heinz, Michael; Struck, Alexander

    2011-01-01

    We implemented three recently proposed approaches to the identification of overlapping and hierarchical substructures in graphs and applied the corresponding algorithms to a network of 492 information-science papers coupled via their cited sources. The thematic substructures obtained and overlaps produced by the three hierarchical cluster algorithms were compared to a content-based categorisation, which we based on the interpretation of titles and keywords. We defined sets of papers dealing with three topics located on different levels of aggregation: h-index, webometrics, and bibliometrics. We identified these topics with branches in the dendrograms produced by the three cluster algorithms and compared the overlapping topics they detected with one another and with the three pre-defined paper sets. We discuss the advantages and drawbacks of applying the three approaches to paper networks in research fields.

  5. Hierarchical ZSM-11 with intergrowth structures:Synthesis,characterization and catalytic properties

    Institute of Scientific and Technical Information of China (English)

    Qingjun; Yu; Chaoyue; Cui; Qiang; Zhang; Jing; Chen; Yang; Li; Jinpeng; Sun; Chunyi; Li; Qiukai; Cui; Chaohe; Yang; Honghong; Shan

    2013-01-01

    Hierarchical ZSM-11 microspheres with intercrystalline mesoporous properties and rod-like crystals intergrowth morphology have been synthesized using a spot of tetrabutylammonium as a single template.XRD,FTIR,SEM,TEM and N2 adsorption analysis revealed that each individual particle was composed of nanosized rod crystals inserting each other and the intercrystalline voids existing among rods gave a significant mesopore size distribution.Steam treatment result demonstrated the excellent hydrothermal stability of samples.Various crystallization modes including constant temperature crystallization (one-stage crystallization) and two-stage temperature-varying crystallization with different 1st stage durations were investigated.The results suggested that the crystallization modes were mainly responsible for the adjustable particle size and textural properties of samples while the small amount of tetrabutylammonium bromide was mainly used to direct the formation of both ZSM-11 framework and its intergrowth morphology.Furthermore,the performance of optimal ZSM-11 as an active component for the catalytic pyrolysis of heavy oil was also investigated.Compared with the commercial pyrolysis catalyst,the hierarchical ZSM-11 catalyst exhibited a high selectivity to desired products(LPG+gasoline+diesel),as well as a much lower dry gas and coke yield,plus a high selectivity and yield of light olefins(C=3 C=4)and very poor selectivity to benzene.Therefore,fully open micropore-mesopore connectivity would make such hierarchically porous ZSM-11 zeolites very attractive for applications in clean petrochemical catalysis field.

  6. Improving Measurement Precision of Hierarchical Latent Traits Using Adaptive Testing

    Science.gov (United States)

    Wang, Chun

    2014-01-01

    Many latent traits in social sciences display a hierarchical structure, such as intelligence, cognitive ability, or personality. Usually a second-order factor is linearly related to a group of first-order factors (also called domain abilities in cognitive ability measures), and the first-order factors directly govern the actual item responses.…

  7. Non-overlapping domain decomposition methods in structural mechanics

    CERN Document Server

    Gosselet, Pierre; 10.1007/BF02905857

    2012-01-01

    The modern design of industrial structures leads to very complex simulations characterized by nonlinearities, high heterogeneities, tortuous geometries... Whatever the modelization may be, such an analysis leads to the solution to a family of large ill-conditioned linear systems. In this paper we study strategies to efficiently solve to linear system based on non-overlapping domain decomposition methods. We present a review of most employed approaches and their strong connections. We outline their mechanical interpretations as well as the practical issues when willing to implement and use them. Numerical properties are illustrated by various assessments from academic to industrial problems. An hybrid approach, mainly designed for multifield problems, is also introduced as it provides a general framework of such approaches.

  8. Developing a novel hierarchical approach for multiscale structural reliability predictions for ultra-high consequence applications.

    Energy Technology Data Exchange (ETDEWEB)

    Emery, John M; Coffin, Peter; Robbins, Brian A; Carroll, Jay; Field, Richard V.,; Yung Suk Jeremy Yoo; Josh Kacher

    2017-09-01

    Microstructural variabilities are among the predominant sources of uncertainty in structural performance and reliability. We seek to develop efficient algorithms for multiscale calcu- lations for polycrystalline alloys such as aluminum alloy 6061-T6 in environments where ductile fracture is the dominant failure mode. Our approach employs concurrent multiscale methods, but does not focus on their development. They are a necessary but not sufficient ingredient to multiscale reliability predictions. We have focused on how to efficiently use concurrent models for forward propagation because practical applications cannot include fine-scale details throughout the problem domain due to exorbitant computational demand. Our approach begins with a low-fidelity prediction at the engineering scale that is sub- sequently refined with multiscale simulation. The results presented in this report focus on plasticity and damage at the meso-scale, efforts to expedite Monte Carlo simulation with mi- crostructural considerations, modeling aspects regarding geometric representation of grains and second-phase particles, and contrasting algorithms for scale coupling.

  9. Structure of the microtubule-binding domain of flagellar dynein.

    Science.gov (United States)

    Kato, Yusuke S; Yagi, Toshiki; Harris, Sarah A; Ohki, Shin-ya; Yura, Kei; Shimizu, Youské; Honda, Shinya; Kamiya, Ritsu; Burgess, Stan A; Tanokura, Masaru

    2014-11-04

    Flagellar dyneins are essential microtubule motors in eukaryotes, as they drive the beating motions of cilia and flagella. Unlike myosin and kinesin motors, the track binding mechanism of dyneins and the regulation between the strong and weak binding states remain obscure. Here we report the solution structure of the microtubule-binding domain of flagellar dynein-c/DHC9 (dynein-c MTBD). The structure reveals a similar overall helix-rich fold to that of the MTBD of cytoplasmic dynein (cytoplasmic MTBD), but dynein-c MTBD has an additional flap, consisting of an antiparallel b sheet. The flap is positively charged and highly flexible. Despite the structural similarity to cytoplasmic MTBD, dynein-c MTBD shows only a small change in the microtubule- binding affinity depending on the registry change of coiled coil-sliding, whereby lacks the apparent strong binding state. The surface charge distribution of dynein-c MTBD also differs from that of cytoplasmic MTBD, which suggests a difference in the microtubule-binding mechanism.

  10. Holey graphene/polypyrrole nanoparticle hybrid aerogels with three-dimensional hierarchical porous structure for high performance supercapacitor

    Science.gov (United States)

    He, Yibo; Bai, Yonglong; Yang, Xiaofan; Zhang, Jinyang; Kang, Liping; Xu, Hua; Shi, Feng; Lei, Zhibin; Liu, Zong-Huai

    2016-06-01

    Holey graphene/polypyrrole hybrid aerogels (HGPAs) with three-dimensional (3D) hierarchical structure have been fabricated by freeze-drying holey graphene/polypyrrole hydrogels, which are assembled by using holey graphene (HG) nanosheets and polypyrrole (PPy) nanoparticles as assembling primitives. The as-prepared HGPAs materials show an interconnected and stable 3D porous network, and PPy nanoparticles uniformly embedded in the aerogel prevent the restacking of holey graphene (HG) nanosheets. The unique hierarchical porous structure and synergistic effect between PPy nanoparticles and HG nanosheets make HGPA hybrid aerogel electrode with a mass ratio of PPy/HGO = 0.75 exhibits high specific capacitance (418 F g-1) at a current density of 0.5 A g-1, extremely outstanding rate capability (80%) at various current densities from 0.5 to 20 A g-1 and good cycling performance (74%) after 2000 cycles in 1.0 M KOH aqueous electrolyte. Moreover, the effect of the PPy nanoparticle sizes in HGPAs on their electrochemical properties is also investigated, and PPy nanoparticles with relatively larger sizes are favorable of the good capacitive performance for the obtained electrodes. The facile and efficient preparation method for HGPAs electrodes may be developed for preparing other holey graphene-based hybrid aerogels with structure-controllable nanostructures.

  11. Hierarchical porous structured zeolite composite for removal of ionic contaminants from waste streams and effective encapsulation of hazardous waste.

    Science.gov (United States)

    Al-Jubouri, Sama M; Curry, Nicholas A; Holmes, Stuart M

    2016-12-15

    A hierarchical structured composite made from clinoptilolite supported on date stones carbon is synthesized using two techniques. The composites are manufactured by fixing a natural zeolite (clinoptilolite) to the porous surface of date stones carbon or by direct hydrothermal synthesis on to the surface to provide a supported high surface area ion-exchange material for metal ion removal from aqueous streams. The fixing of the clinoptilolite is achieved using sucrose and citric acid as a binder. The composites and pure clinoptilolite were compared to test the efficacy for the removal of Sr(2+) ions from an aqueous phase. The encapsulation of the Sr(2+) using either vitrification or a geo-polymer addition was tested to ensure that the hazardous waste can be made safe for disposal. The hierarchical structured composites were shown to achieve a higher ion exchange capacity per gram of zeolite than the pure clinoptilolite (65mg/g for the pure natural clinoptilolite and 72mg/g for the pure synthesized clinoptilolite) with the synthesized composite (160mg/g) having higher capacity than the natural clinoptilolite composite (95mg/g). The rate at which the equilibria were established followed the same trend showing the composite structure facilitates diffusion to the ion-exchange sites in the zeolite.

  12. Unravelling the Domain Structures in GeTe and LaAlO3

    NARCIS (Netherlands)

    Vermeulen, Paul A.; Kumar, Anil; ten Brink, Gert H.; Blake, Graeme R.; Kooi, Bart J.

    2016-01-01

    To resolve the controversy in the literature, we studied the extensively twinned domain structure of ferroelectric germanium telluride (GeTe) to formulate a comprehensive three-dimensional domain description. The observed herringbone-domain structure arises due to the displacive phase transformation

  13. Mapping the structural and dynamical features of kinesin motor domains.

    Directory of Open Access Journals (Sweden)

    Guido Scarabelli

    Full Text Available Kinesin motor proteins drive intracellular transport by coupling ATP hydrolysis to conformational changes that mediate directed movement along microtubules. Characterizing these distinct conformations and their interconversion mechanism is essential to determining an atomic-level model of kinesin action. Here we report a comprehensive principal component analysis of 114 experimental structures along with the results of conventional and accelerated molecular dynamics simulations that together map the structural dynamics of the kinesin motor domain. All experimental structures were found to reside in one of three distinct conformational clusters (ATP-like, ADP-like and Eg5 inhibitor-bound. These groups differ in the orientation of key functional elements, most notably the microtubule binding α4-α5, loop8 subdomain and α2b-β4-β6-β7 motor domain tip. Group membership was found not to correlate with the nature of the bound nucleotide in a given structure. However, groupings were coincident with distinct neck-linker orientations. Accelerated molecular dynamics simulations of ATP, ADP and nucleotide free Eg5 indicate that all three nucleotide states could sample the major crystallographically observed conformations. Differences in the dynamic coupling of distal sites were also evident. In multiple ATP bound simulations, the neck-linker, loop8 and the α4-α5 subdomain display correlated motions that are absent in ADP bound simulations. Further dissection of these couplings provides evidence for a network of dynamic communication between the active site, microtubule-binding interface and neck-linker via loop7 and loop13. Additional simulations indicate that the mutations G325A and G326A in loop13 reduce the flexibility of these regions and disrupt their couplings. Our combined results indicate that the reported ATP and ADP-like conformations of kinesin are intrinsically accessible regardless of nucleotide state and support a model where neck

  14. Hierarchical linear modeling (HLM) of longitudinal brain structural and cognitive changes in alcohol-dependent individuals during sobriety.

    Science.gov (United States)

    Yeh, Ping-Hong; Gazdzinski, Stefan; Durazzo, Timothy C; Sjöstrand, Karl; Meyerhoff, Dieter J

    2007-12-01

    Hierarchical linear modeling (HLM) can reveal complex relationships between longitudinal outcome measures and their covariates under proper consideration of potentially unequal error variances. We demonstrate the application of HLM to the study of magnetic resonance imaging (MRI)-derived brain volume changes and cognitive changes in abstinent alcohol-dependent individuals as a function of smoking status, smoking severity, and drinking quantities. Twenty non-smoking recovering alcoholics (nsALC) and 30 age-matched smoking recovering alcoholics (sALC) underwent quantitative MRI and cognitive assessments at 1 week, 1 month, and 7 months of sobriety. Eight non-smoking light drinking controls were studied at baseline and 7 months later. Brain and ventricle volumes at each time point were quantified using MRI masks, while the boundary shift integral method measured volume changes between time points. Using HLM, we modeled volumetric and cognitive outcome measures as a function of cigarette and alcohol use variables. Different hierarchical linear models with unique model structures are presented and discussed. The results show that smaller brain volumes at baseline predict faster brain volume gains, which were also related to greater smoking and drinking severities. Over 7 months of abstinence from alcohol, sALC compared to nsALC showed less improvements in visuospatial learning and memory despite larger brain volume gains and ventricular shrinkage. Different and unique hierarchical linear models allow assessments of the complex relationships among outcome measures of longitudinal data sets. These HLM applications suggest that chronic cigarette smoking modulates the temporal dynamics of brain structural and cognitive changes in alcoholics during prolonged sobriety.

  15. The Origin of Hierarchical Structure in Self-Assembled Graphene Oxide Papers and the Effect on Mechanical Properties

    Science.gov (United States)

    Nandy, Krishanu

    The quest for new materials with ever improving properties has motivated interest in bulk nanostructured materials. Graphene, a two-dimensional sheet of hexagonally arranged carbon atoms, has been of particular interest given its exceptional mechanical, thermal, optical and electrical properties. Graphene oxide is a chemically modified form of graphene in which the honeycomb lattice of carbon atoms is decorated with oxygen bearing functional groups. Graphene oxide represents a facile route for the production of large quantities of graphene based materials, is stable in aqueous and polar organic solvents and has the potential for further chemical modification. In this dissertation, the origin and influence of hierarchical structure on the mechanical properties of graphene oxide paper and graphene oxide paper based materials has been investigated. Free-standing papers derived from graphene oxide are of interest as structural materials due to their impressive mechanical properties. While studies have investigated the mechanical properties of graphene oxide papers, little is known about the formation mechanism. Using a series of flash-freezing experiments on graphene oxide papers undergoing formation, a stop-motion animation of the fabrication process was obtained. The results explain the origin of the hierarchical nature of graphene oxide papers and provide a method for the tailoring of graphene oxide based materials. An in depth study of fusion of graphene oxide papers demonstrates a simple single-step route for the fabrication of practical materials derived from graphene oxide papers. Fused papers retain the properties of constituent papers allowing for the fabrication of mechanical heterostructures that replicate the hierarchical nature of natural materials. The contribution of the hierarchical nature of graphene oxide papers to the mechanical properties was examined by comparing papers formed by two different mechanisms. The intermediate length scale structures

  16. CHIMERA: Top-down model for hierarchical, overlapping and directed cluster structures in directed and weighted complex networks

    Science.gov (United States)

    Franke, R.

    2016-11-01

    In many networks discovered in biology, medicine, neuroscience and other disciplines special properties like a certain degree distribution and hierarchical cluster structure (also called communities) can be observed as general organizing principles. Detecting the cluster structure of an unknown network promises to identify functional subdivisions, hierarchy and interactions on a mesoscale. It is not trivial choosing an appropriate detection algorithm because there are multiple network, cluster and algorithmic properties to be considered. Edges can be weighted and/or directed, clusters overlap or build a hierarchy in several ways. Algorithms differ not only in runtime, memory requirements but also in allowed network and cluster properties. They are based on a specific definition of what a cluster is, too. On the one hand, a comprehensive network creation model is needed to build a large variety of benchmark networks with different reasonable structures to compare algorithms. On the other hand, if a cluster structure is already known, it is desirable to separate effects of this structure from other network properties. This can be done with null model networks that mimic an observed cluster structure to improve statistics on other network features. A third important application is the general study of properties in networks with different cluster structures, possibly evolving over time. Currently there are good benchmark and creation models available. But what is left is a precise sandbox model to build hierarchical, overlapping and directed clusters for undirected or directed, binary or weighted complex random networks on basis of a sophisticated blueprint. This gap shall be closed by the model CHIMERA (Cluster Hierarchy Interconnection Model for Evaluation, Research and Analysis) which will be introduced and described here for the first time.

  17. Assessing the Graphical and Algorithmic Structure of Hierarchical Coloured Petri Net Models

    Directory of Open Access Journals (Sweden)

    George Benwell

    1994-11-01

    Full Text Available Petri nets, as a modelling formalism, are utilised for the analysis of processes, whether for explicit understanding, database design or business process re-engineering. The formalism, however, can be represented on a virtual continuum from highly graphical to largely algorithmic. The use and understanding of the formalism will, in part, therefore depend on the resultant complexity and power of the representation and, on the graphical or algorithmic preference of the user. This paper develops a metric which will indicate the graphical or algorithmic tendency of hierarchical coloured Petri nets.

  18. Iterative Maps with Hierarchical Clustering for the Observed Scales of Astrophysical and Cosmological Structures

    CERN Document Server

    Capozziello, S; De Siena, S; Guerra, F; Illuminati, F

    2000-01-01

    We derive, in order of magnitude, the observed astrophysical and cosmologicalscales in the Universe, from neutron stars to superclusters of galaxies, up to,asymptotically, the observed radius of the Universe. This result is obtained byintroducing a recursive scheme of alternating hierachical mechanisms ofthree-dimensional and two-dimensional close packings of gravitationallyinteracting objects. The iterative scheme yields a rapidly converging geometricsequence, which can be described as a hierarchical clustering of aggregates,having the observed radius of the Universe as its fixed point.

  19. Building and Using Object-Oriented Frameworks for Semi-Structures Domains: The Sales Promotion Domain as Example

    NARCIS (Netherlands)

    A. Dalebout; J. van Hillegersberg (Jos); B. Wierenga (Berend)

    1998-01-01

    textabstractObject-oriented (00) frameworks are considered an important step forward in developing software applications efficiently. Success of frameworks has however predominantly been limited to structured domains.This paper describes a method for developing 00 domainframeworks for semi-structure

  20. Structural organization and interactions of transmembrane domains in tetraspanin proteins

    Directory of Open Access Journals (Sweden)

    DeGrado William F

    2005-06-01

    Full Text Available Abstract Background Proteins of the tetraspanin family contain four transmembrane domains (TM1-4 linked by two extracellular loops and a short intracellular loop, and have short intracellular N- and C-termini. While structure and function analysis of the larger extracellular loop has been performed, the organization and role of transmembrane domains have not been systematically assessed. Results Among 28 human tetraspanin proteins, the TM1-3 sequences display a distinct heptad repeat motif (abcdefgn. In TM1, position a is occupied by structurally conserved bulky residues and position d contains highly conserved Asn and Gly residues. In TM2, position a is occupied by conserved small residues (Gly/Ala/Thr, and position d has a conserved Gly and two bulky aliphatic residues. In TM3, three a positions of the heptad repeat are filled by two leucines and a glutamate/glutamine residue, and two d positions are occupied by either Phe/Tyr or Val/Ile/Leu residues. No heptad motif is apparent in TM4 sequences. Mutations of conserved glycines in human CD9 (Gly25 and Gly32 in TM1; Gly67 and Gly74 in TM2 caused aggregation of mutant proteins inside the cell. Modeling of the TM1-TM2 interface in CD9, using a novel algorithm, predicts tight packing of conserved bulky residues against conserved Gly residues along the two helices. The homodimeric interface of CD9 was mapped, by disulfide cross-linking of single-cysteine mutants, to the vicinity of residues Leu14 and Phe17 in TM1 (positions g and c and Gly77, Gly80 and Ala81 in TM2 (positions d, g and a, respectively. Mutations of a and d residues in both TM1 and TM2 (Gly25, Gly32, Gly67 and Gly74, involved in intramolecular TM1-TM2 interaction, also strongly diminished intermolecular interaction, as assessed by cross-linking of Cys80. Conclusion Our results suggest that tetraspanin intra- and intermolecular interactions are mediated by conserved residues in adjacent, but distinct regions of TM1 and TM2. A key