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Sample records for heming lake study

  1. Heme transport and erythropoiesis

    Yuan, Xiaojing; Fleming, Mark D.; Hamza, Iqbal

    2013-01-01

    In humans, systemic heme homeostasis is achieved via coordinated regulation of heme synthesis, transport and degradation. Although the heme biosynthesis and degradation pathways have been well characterized, the pathways for heme trafficking and incorporation into hemoproteins remains poorly understood. In the past few years, researchers have exploited genetic, cellular and biochemical tools, to identify heme transporters and, in the process, reveal unexpected functions for this elusive group of proteins. However, given the complexity of heme trafficking pathways, current knowledge of heme transporters is fragmented and sometimes contradictory. This review seeks to focus on recent studies on heme transporters with specific emphasis on their functions during erythropoiesis. PMID:23415705

  2. Studying disorders of vertebrate iron and heme metabolism using zebrafish.

    van der Vorm, Lisa N; Paw, Barry H

    2017-01-01

    Iron is a crucial component of heme- and iron-sulfur clusters, involved in vital cellular functions such as oxygen transport, DNA synthesis, and respiration. Both excess and insufficient levels of iron and heme-precursors cause human disease, such as iron-deficiency anemia, hemochromatosis, and porphyrias. Hence, their levels must be tightly regulated, requiring a complex network of transporters and feedback mechanisms. The use of zebrafish to study these pathways and the underlying genetics offers many advantages, among others their optical transparency, ex-vivo development and high genetic and physiological conservations. This chapter first reviews well-established methods, such as large-scale mutagenesis screens that have led to the initial identification of a series of iron and heme transporters and the generation of a variety of mutant lines. Other widely used techniques are based on injection of RNA, including complementary morpholino knockdown and gene overexpression. In addition, we highlight several recently developed approaches, most notably endonuclease-based gene knockouts such as TALENs or the CRISPR/Cas9 system that have been used to study how loss of function can induce human disease phenocopies in zebrafish. Rescue by chemical complementation with iron-based compounds or small molecules can subsequently be used to confirm causality of the genetic defect for the observed phenotype. All together, zebrafish have proven to be - and will continue to serve as an ideal model to advance our understanding of the pathogenesis of human iron and heme-related diseases and to develop novel therapies to treat these conditions. Copyright © 2017 Elsevier Inc. All rights reserved.

  3. Moessbauer spectroscopic study of polymer-bound heme complexes

    Tsuchida, Eishun; Nishide, Hiroyuki; Yokoyama, Hiroyuki; Inoue, Hidenari; Shirai, Tsuneo.

    1984-01-01

    Moessbauer spectra were measured on the heme complexes of poly(1-vinyl- and 1-vinyl-2-methylimidazole)(PVI and PMI) and heme derivatives with covalently bound imidazoleligand (IH) and 2-methylimidazole-ligand (MIH) embedded in poly(1-vinyl-2-pyrrolidone) film. Quadrupole splitting (ΔE sub(Q)) for the carbon monoxide adduct of PMI-heme indicated large electronic field gradient at the iron nucleus, probably due to steric hindrance of the polymer chain, and this behavior agreed with its low affinity with carbon monoxide. PMI-heme formed an oxygen adduct and its isomer shift and ΔE sub(Q) values were obtained. (author)

  4. Heme Gazing: Illuminating Eukaryotic Heme Trafficking, Dynamics, and Signaling with Fluorescent Heme Sensors.

    Hanna, David A; Martinez-Guzman, Osiris; Reddi, Amit R

    2017-04-04

    Heme (iron protoporphyrin IX) is an essential protein prosthetic group and signaling molecule required for most life on Earth. All heme-dependent processes require the dynamic and rapid mobilization of heme from sites of synthesis or uptake to hemoproteins present in virtually every subcellular compartment. The cytotoxicity and hydrophobicity of heme necessitate that heme mobilization be carefully controlled to mitigate the deleterious effects of this essential toxin. Indeed, a number of disorders, including certain cancers, cardiovascular diseases, and aging and age-related neurodegenerative diseases, are tied to defects in heme homeostasis. However, the molecules and mechanisms that mediate heme transport and trafficking, and the dynamics of these processes, are poorly understood. This is in large part due to the lack of physical tools for probing cellular heme. Herein, we discuss the recent development of fluorescent probes that can monitor and image kinetically labile heme with respect to its mobilization and role in signaling. In particular, we will highlight how heme gazing with these tools can uncover new heme trafficking factors upon being integrated with genetic screens and illuminate the concentration, subcellular distribution, and dynamics of labile heme in various physiological contexts. Altogether, the monitoring of labile heme, along with recent biochemical and cell biological studies demonstrating the reversible regulation of certain cellular processes by heme, is challenging us to reconceptualize heme from being a static cofactor buried in protein active sites to a dynamic and mobile signaling molecule.

  5. In vitro studies on heme oxygenase-1 and P24 antigen HIV-1 level ...

    Background: Heme oxygenase-1 (HO-1) is a protein secreted by immune cells as a part of immune response mechanism.HO-1 can be induced by variety agents that causingoxidative stress, such as exposure to 100% oxygenat2,4 ATA pressure.It plays a vital role in maintaining cellular homeostasis.This study was ...

  6. 4-Aminoquinoline-pyrimidine hybrids: synthesis, antimalarial activity, heme binding and docking studies.

    Kumar, Deepak; Khan, Shabana I; Tekwani, Babu L; Ponnan, Prija; Rawat, Diwan S

    2015-01-07

    A series of novel 4-aminoquinoline-pyrimidine hybrids has been synthesized and evaluated for their antimalarial activity. Several compounds showed promising in vitro antimalarial activity against both CQ-sensitive and CQ-resistant strains with high selectivity index. All the compounds were found to be non-toxic to the mammalian cell lines. Selected compound 7g exhibited significant suppression of parasitemia in the in vivo assay. The heme binding studies were conducted to determine the mode of action of these hybrid molecules. These compounds form a stable 1:1 complex with hematin suggesting that heme may be one of the possible targets of these hybrids. The interaction of these conjugate hybrids was also investigated by the molecular docking studies in the binding site of PfDHFR. The pharmacokinetic property analysis of best active compounds was also studied using ADMET prediction. Copyright © 2014 Elsevier Masson SAS. All rights reserved.

  7. X-ray absorption spectroscopic studies of mononuclear non-heme iron enzymes

    Westre, Tami E. [Stanford Univ., CA (United States)

    1996-01-01

    Fe-K-edge X-ray absorption spectroscopy (XAS) has been used to investigate the electronic and geometric structure of the iron active site in non-heme iron enzymes. A new theoretical extended X-ray absorption fine structure (EXAFS) analysis approach, called GNXAS, has been tested on data for iron model complexes to evaluate the utility and reliability of this new technique, especially with respect to the effects of multiple-scattering. In addition, a detailed analysis of the 1s→3d pre-edge feature has been developed as a tool for investigating the oxidation state, spin state, and geometry of iron sites. Edge and EXAFS analyses have then been applied to the study of non-heme iron enzyme active sites.

  8. Study on models of O2 binding to heme using density functional theory

    Hovorun D. M.

    2009-08-01

    Full Text Available Aim. To study a mechanism of molecular oxygen binding to heme three models of geometry structure of the complex are considered: the axis of O2 molecule is situated perpendicularly to the porphin macrocycle, parallel, and angularly. Methods. The Fe(II porphin complexes with dioxygen are calculated by the quantum-chemical method of density functional theory with the UB3LYP/6-311G approximation. Results. The optimized geometry and electron structures as well as the absorption IR spectra of the complexes in the high-spin (septet state are described. Conclusions. It is shown that the main mechanism of spin-orbit coupling during the O2 binding to heme is connected with peculiarity of the O2 molecule electronic structure.

  9. Heme Synthesis and Acquisition in Bacterial Pathogens.

    Choby, Jacob E; Skaar, Eric P

    2016-08-28

    Bacterial pathogens require the iron-containing cofactor heme to cause disease. Heme is essential to the function of hemoproteins, which are involved in energy generation by the electron transport chain, detoxification of host immune effectors, and other processes. During infection, bacterial pathogens must synthesize heme or acquire heme from the host; however, host heme is sequestered in high-affinity hemoproteins. Pathogens have evolved elaborate strategies to acquire heme from host sources, particularly hemoglobin, and both heme acquisition and synthesis are important for pathogenesis. Paradoxically, excess heme is toxic to bacteria and pathogens must rely on heme detoxification strategies. Heme is a key nutrient in the struggle for survival between host and pathogen, and its study has offered significant insight into the molecular mechanisms of bacterial pathogenesis. Copyright © 2016 Elsevier Ltd. All rights reserved.

  10. Control of intracellular heme levels: Heme transporters and Heme oxygenases

    Khan, Anwar A.; Quigley, John G.

    2011-01-01

    Heme serves as a co-factor in proteins involved in fundamental biological processes including oxidative metabolism, oxygen storage and transport, signal transduction and drug metabolism. In addition, heme is important for systemic iron homeostasis in mammals. Heme has important regulatory roles in cell biology, yet excessive levels of intracellular heme are toxic; thus, mechanisms have evolved to control the acquisition, synthesis, catabolism and expulsion of cellular heme. Recently, a number of transporters of heme and heme synthesis intermediates have been described. Here we review aspects of heme metabolism and discuss our current understanding of heme transporters, with emphasis on the function of the cell-surface heme exporter, FLVCR. Knockdown of Flvcr in mice leads to both defective erythropoiesis and disturbed systemic iron homeostasis, underscoring the critical role of heme transporters in mammalian physiology. PMID:21238504

  11. Meat, Dietary Heme Iron, and Risk of Type 2 Diabetes Mellitus: The Singapore Chinese Health Study.

    Talaei, Mohammad; Wang, Ye-Li; Yuan, Jian-Min; Pan, An; Koh, Woon-Puay

    2017-10-01

    We evaluated the relationships of red meat, poultry, fish, and shellfish intakes, as well as heme iron intake, with the risk of type 2 diabetes mellitus (T2D).The Singapore Chinese Health Study is a population-based cohort study that recruited 63,257 Chinese adults aged 45-74 years from 1993 to 1998. Usual diet was evaluated using a validated 165-item semiquantitative food frequency questionnaire at recruitment. Physician-diagnosed T2D was self-reported during 2 follow-up interviews in 1999-2004 and 2006-2010. During a mean follow-up of 10.9 years, 5,207 incident cases of T2D were reported. When comparing persons in the highest intake quartiles with those in the lowest, the multivariate-adjusted hazard ratio for T2D was 1.23 (95% confidence interval (CI): 1.14, 1.33) for red meat intake (P for trend meat intake remained significantly associated with T2D risk (multivariate-adjusted hazard ratio = 1.13, 95% CI: 1.01, 1.25; P for trend = 0.02). Heme iron was associated with a higher risk of T2D even after additional adjustment for red meat intake (multivariate-adjusted hazard ratio = 1.14, 95% CI: 1.02, 1.28; P for trend = 0.03). In conclusion, red meat and poultry intakes were associated with a higher risk of T2D. These associations were mediated completely for poultry and partially for red meat by heme iron intake. © The Author(s) 2017. Published by Oxford University Press on behalf of the Johns Hopkins Bloomberg School of Public Health. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

  12. Microplastic pollution in lakes and lake shoreline sediments - A case study on Lake Bolsena and Lake Chiusi (central Italy).

    Fischer, Elke Kerstin; Paglialonga, Lisa; Czech, Elisa; Tamminga, Matthias

    2016-06-01

    Rivers and effluents have been identified as major pathways for microplastics of terrestrial sources. Moreover, lakes of different dimensions and even in remote locations contain microplastics in striking abundances. This study investigates concentrations of microplastic particles at two lakes in central Italy (Lake Bolsena, Lake Chiusi). A total number of six Manta Trawls have been carried out, two of them one day after heavy winds occurred on Lake Bolsena showing effects on particle distribution of fragments and fibers of varying size categories. Additionally, 36 sediment samples from lakeshores were analyzed for microplastic content. In the surface waters 2.68 to 3.36 particles/m(3) (Lake Chiusi) and 0.82 to 4.42 particles/m(3) (Lake Bolsena) were detected, respectively. Main differences between the lakes are attributed to lake characteristics such as surface and catchment area, depth and the presence of local wind patterns and tide range at Lake Bolsena. An event of heavy winds and moderate rainfall prior to one sampling led to an increase of concentrations at Lake Bolsena which is most probable related to lateral land-based and sewage effluent inputs. The abundances of microplastic particles in sediments vary from mean values of 112 (Lake Bolsena) to 234 particles/kg dry weight (Lake Chiusi). Lake Chiusi results reveal elevated fiber concentrations compared to those of Lake Bolsena what might be a result of higher organic content and a shift in grain size distribution towards the silt and clay fraction at the shallow and highly eutrophic Lake Chiusi. The distribution of particles along different beach levels revealed no significant differences. Copyright © 2016 Elsevier Ltd. All rights reserved.

  13. Cyanide binding to human plasma heme-hemopexin: A comparative study

    Ascenzi, Paolo, E-mail: ascenzi@uniroma3.it [Laboratorio Interdipartimentale di Microscopia Elettronica, Universita Roma Tre, Roma (Italy); Istituto Nazionale di Biostrutture e Biosistemi, Roma (Italy); Leboffe, Loris [Istituto Nazionale di Biostrutture e Biosistemi, Roma (Italy); Polticelli, Fabio [Dipartimento di Biologia, Universita Roma Tre, Roma (Italy)

    2012-11-16

    Highlights: Black-Right-Pointing-Pointer Cyanide binding to ferric HHPX-heme-Fe. Black-Right-Pointing-Pointer Cyanide binding to ferrous HHPX-heme-Fe. Black-Right-Pointing-Pointer Dithionite-mediated reduction of ferric HHPX-heme-Fe-cyanide. Black-Right-Pointing-Pointer Cyanide binding to HHPX-heme-Fe is limited by ligand deprotonation. Black-Right-Pointing-Pointer Cyanide dissociation from HHPX-heme-Fe-cyanide is limited by ligand protonation. -- Abstract: Hemopexin (HPX) displays a pivotal role in heme scavenging and delivery to the liver. In turn, heme-Fe-hemopexin (HPX-heme-Fe) displays heme-based spectroscopic and reactivity properties. Here, kinetics and thermodynamics of cyanide binding to ferric and ferrous hexa-coordinate human plasma HPX-heme-Fe (HHPX-heme-Fe(III) and HHPX-heme-Fe(II), respectively), and for the dithionite-mediated reduction of the HHPX-heme-Fe(III)-cyanide complex, at pH 7.4 and 20.0 Degree-Sign C, are reported. Values of thermodynamic and kinetic parameters for cyanide binding to HHPX-heme-Fe(III) and HHPX-heme-Fe(II) are K = (4.1 {+-} 0.4) Multiplication-Sign 10{sup -6} M, k{sub on} = (6.9 {+-} 0.5) Multiplication-Sign 10{sup 1} M{sup -1} s{sup -1}, and k{sub off} = 2.8 Multiplication-Sign 10{sup -4} s{sup -1}; and H = (6 {+-} 1) Multiplication-Sign 10{sup -1} M, h{sub on} = 1.2 Multiplication-Sign 10{sup -1} M{sup -1} s{sup -1}, and h{sub off} = (7.1 {+-} 0.8) Multiplication-Sign 10{sup -2} s{sup -1}, respectively. The value of the rate constant for the dithionite-mediated reduction of the HHPX-heme-Fe(III)-cyanide complex is l = 8.9 {+-} 0.8 M{sup -1/2} s{sup -1}. HHPX-heme-Fe reactivity is modulated by proton acceptor/donor amino acid residue(s) (e.g., His236) assisting the deprotonation and protonation of the incoming and outgoing ligand, respectively.

  14. Control of intracellular heme levels: Heme transporters and heme oxygenases

    Khan, Anwar A.; Quigley, John G.

    2011-01-01

    Heme serves as a co-factor in proteins involved in fundamental biological processes including oxidative metabolism, oxygen storage and transport, signal transduction and drug metabolism. In addition, heme is important for systemic iron homeostasis in mammals. Heme has important regulatory roles in cell biology, yet excessive levels of intracellular heme are toxic; thus, mechanisms have evolved to control the acquisition, synthesis, catabolism and expulsion of cellular heme. Recently, a number...

  15. A dual component heme biosensor that integrates heme transport and synthesis in bacteria.

    Nobles, Christopher L; Clark, Justin R; Green, Sabrina I; Maresso, Anthony W

    2015-11-01

    Bacterial pathogens acquire host iron to power cellular processes and replication. Heme, an iron-containing cofactor bound to hemoglobin, is scavenged by bacterial proteins to attain iron. Methods to measure intracellular heme are laborious, involve complex chemistry, or require radioactivity. Such drawbacks limit the study of the mechanistic steps of heme transport and breakdown. Hypothesizing heme homeostasis could be measured with fluorescent methods, we coupled the conversion of heme to biliverdin IXα (a product of heme catabolism) by heme oxygenase 1 (HO1) with the production of near-infrared light upon binding this verdin by infrared fluorescent protein (IFP1.4). The resultant heme sensor, IFP-HO1, was fluorescent in pathogenic E. coli exposed to heme but not in the absence of the heme transporter ChuA and membrane coupling protein TonB, thereby validating their long-standing proposed role in heme uptake. Fluorescence was abolished in a strain lacking hemE, the central gene in the heme biosynthetic pathway, but stimulated by iron, signifying the sensor reports on intracellular heme production. Finally, an invasive strain of E. coli harboring the sensor was fluorescent during an active infection. This work will allow researchers to expand the molecular toolbox used to study heme and iron acquisition in culture and during infection. Copyright © 2015 Elsevier B.V. All rights reserved.

  16. Synthesis, antimalarial activity, heme binding and docking studies of N-substituted 4-aminoquinoline-pyrimidine molecular hybrids.

    Maurya, Shiv Shyam; Khan, Shabana I; Bahuguna, Aparna; Kumar, Deepak; Rawat, Diwan S

    2017-03-31

    A series of novel N-substituted 4-aminoquinoline-pyrimidine hybrids have been synthesized via simple and economic route and evaluated for their antimalarial activity. Most compounds showed potent antimalarial activity against both CQ-sensitive and CQ-resistant strains with high selectivity index. All the compounds were found to be non-toxic to the mammalian cell lines. The most active compound 7b was analysed for heme binding activity using UV-spectrophotometer. Compound was found to interact with heme and a complex formation between compound and heme in a 1:1 stoichiometry ratio was determined using job plots. The interaction of these hybrids was also investigated by the molecular docking studies in the binding site of wild type Pf-DHFR-TS and quadruple mutant Pf-DHFR-TS. The pharmacokinetic property analysis of best active compounds was also studied by ADMET prediction. Copyright © 2017 Elsevier Masson SAS. All rights reserved.

  17. Syntheses of carbon-13 labeled protoporphyrin-IX for spectroscopic studies of heme proteins

    Fujinari, E.M.

    1985-01-01

    The development of various methodologies for synthesis of selectively tailored protoporphyrin-IX dimethyl ester are presented. The iron(II) complex of protoporphyrin-IX is the heme, the prosthetic group for Hb, Mb, cytochromes and peroxidases. The significance of this research is to provide direct means to establish definitive carbon-13 NMR assignments of heme proteins in order to study not only the structure-function relationships, but also protein dynamics of these vital systems. Carbon-13 labeling at the beta-vinyl position was first achieved by ozonolysis of protoporphyrin-IX dimethyl ester. Column LC method were used to first isolate 2,4-diformyldeuteroporphyrin-IX dimethyl ester. Concomitantly, monofomyl-monovinyl porphyrins were obtained as a mixture of two isomers. This mixture was separated by MPLC or prep HPLC to afford the isomerically pure products, Spirographis porphyrin dimethyl ester and Iso-Spirographis porphyrin dimethyl ester. A Wittig reaction to each of these porphyrins with 13 C-methyltriphenylphosphonium iodide gave 2,4-bis[ 13 C 2 ]-vinyl protoporphyrin-IX dimethyl ester, 2-[ 13 C 2 ]-vinyl protoporphyrin-IX dimethyl ester, and the 4-[ 13 C 2 ]-vinyl protoporphyrin-IX dimethyl ester, respectively

  18. Ligand exchange reactions of the heme group in hemoglobin and myoglobin as studied by pulse radiolysis

    Raap, I.A.

    1978-01-01

    In this thesis, the kinetic aspects of the ligand exchange reactions of hemoglobin are studied using the pulse radiolysis technique, in particular, the reactions of hydrated electrons with methemoglobin. A hitherto unobserved transient state of the heme group is observed which appears immediately after the rapid reduction process. The absorption spectrum of this new species has the characteristics of a ferrous low-spin state and can therefore be ascribed to the formation of a hemochrome non-equilibrium state. The subsequent relaxation of this intermediate structure into a deoxy-conformation is dependent on the amount of proton activity in the solution and on the presence of organic and inorganic phosphate anions. The final absorption spectrum of the heme group is shown to correspond to a ferrous high-spin state in the relaxed quaternary conformation. This is in agreement with the kinetics observen the binding of carbon monoxide and oxygen to partially reduced methemoglobin. At reduction degrees of methemoglobin as well as of valncy 8ybrids where there is an important contribution from species with two reduced subunits, the binding of carbon monoxide to hemoglobin occurs with on-rate constants characteristic for the tensed quaternary conformation. It is argued that this conformational change of hemoglobin (the R-to-T transition) takes place very rapidly, which suggests the participation of an activated relaxed conformation. In addition, it is found that there is a distinct heterogeneity in the binding of oxygen to partially reduced methemoglobin even at low degrees of reduction

  19. Lake Nasser evaporation reduction study

    Hala M.I. Ebaid

    2010-10-01

    Full Text Available This study aims to evaluate the reduction of evaporation of Lake Nasser’s water caused by disconnecting (fully or partially some of its secondary channels (khors. This evaluation integrates remote sensing, Geographic Information System (GIS techniques, aerodynamic principles, and Landsat7 ETM+ images. Three main procedures were carried out in this study; the first derived the surface temperature from Landsat thermal band; the second derived evaporation depth and approximate evaporation volume for the entire lake, and quantified evaporation loss to the secondary channels’ level over one month (March by applied aerodynamic principles on surface temperature of the raster data; the third procedure applied GIS suitability analysis to determine which of these secondary channels (khors should be disconnected. The results showed evaporation depth ranging from 2.73 mm/day at the middle of the lake to 9.58 mm/day at the edge. The evaporated water-loss value throughout the entire lake was about 0.86 billion m3/month (March. The analysis suggests that it is possible to save an approximate total evaporation volume loss of 19.7 million m3/month (March, and thus 2.4 billion m3/year, by disconnecting two khors with approximate construction heights of 8 m and 15 m. In conclusion, remote sensing and GIS are useful for applications in remote locations where field-based information is not readily available and thus recommended for decision makers remotely planning in water conservation and management.

  20. Isotope techniques in lake water studies

    Gourcy, L.

    1999-01-01

    Freshwater lakes are among the most easily exploitable freshwater resources. Lakes are also recognized as major sedimentological features in which stored material can be used to study recent climate and pollution evolution. To adequately preserve these important landscape features, and to use them as climatic archives, an improved understanding of processes controlling their hydrologic and bio-geochemical environments if necessary. This article briefly describes the IAEA activities related to the study of lakes in such areas as lake budget, lake dynamics, water contamination, and paleolimnological investigations

  1. Lake Titicaca: History and current studies

    Paredes Riveros, M.A.; Gonfiantini, R.

    1999-01-01

    This article summarizes results of Titicaca lake water balance studies including the findings of the IAEA Technical Cooperation Project RLA/08/022. Direct precipitation over the lake accounts for about 55% of the water inflow and rivers and streams provide about 45% of the water inflow. Diffuse groundwater leakage into the lake from coastal aquifers is believed to represent a negligible term of water balance. Evaporation from the lake is strong and accounts for more than 95% of the water losses. The isotopic and chemical composition data obtained within the frameworks of the IAEA Technical Cooperation Project RLA/08/022 are discussed

  2. Lake Titicaca: History and current studies

    Paredes Riveros, M A [PELT, Puno (Peru); Gonfiantini, R [Istituto di Geocronologia e Geochimica Isotopica del CNR, Pisa (Italy)

    1999-12-01

    This article summarizes results of Titicaca lake water balance studies including the findings of the IAEA Technical Cooperation Project RLA/08/022. Direct precipitation over the lake accounts for about 55% of the water inflow and rivers and streams provide about 45% of the water inflow. Diffuse groundwater leakage into the lake from coastal aquifers is believed to represent a negligible term of water balance. Evaporation from the lake is strong and accounts for more than 95% of the water losses. The isotopic and chemical composition data obtained within the frameworks of the IAEA Technical Cooperation Project RLA/08/022 are discussed.

  3. Heme Sensor Proteins*

    Girvan, Hazel M.; Munro, Andrew W.

    2013-01-01

    Heme is a prosthetic group best known for roles in oxygen transport, oxidative catalysis, and respiratory electron transport. Recent years have seen the roles of heme extended to sensors of gases such as O2 and NO and cell redox state, and as mediators of cellular responses to changes in intracellular levels of these gases. The importance of heme is further evident from identification of proteins that bind heme reversibly, using it as a signal, e.g. to regulate gene expression in circadian rhythm pathways and control heme synthesis itself. In this minireview, we explore the current knowledge of the diverse roles of heme sensor proteins. PMID:23539616

  4. A Systematic Study of Zerbar Lake Restoration

    Hosseini, Reza; Oveis Torabi, Seyed; Forman Asgharzadeh, Deonna

    2017-04-01

    The beautiful lake of Zerbar, located near Marivan City at the west of Iran, is a freshwater lake with an area of 20 km2 and average depth of 5 meters. The lake is created by regional tectonic activities and is mainly fed with natural spring water from bottom. During the past three decades, regional development has caused much disturbance to the natural environment of the lake and its watershed. Rescuing the lake is crucial to the sustainability of the whole region. The study of Zerbar Restoration was performed with the aim to restore its health indicators. Variety of human activities in the watershed, as well as the multidisciplinary nature of lake restoration studies, made it necessary to develop a systematic approach to conduct the study. In Step I of restoration studies, satellite images were investigated to identify the historical changes of watershed during the past 30 years. Meanwhile, documents since 50 years ago were studied. Results indicate that farmland and graze land areas have been relatively constant during the past 50 years. Also, the area of lake, its riparian canes and floating plants have not changed much. In fact, the only significant land use change observed was the significant spread of Marivan City that has stretched toward the lake. The main physical variation to the lake has been elevating the southern edge of the lake by a constructing a landfill dam which was done to control the lake's overflow discharge for irrigation of downstream farmland development. Step II consists of studies performed by disciplines of water resources, hydrogeology, water quality, wetland and watershed ecology, agriculture, animal farming and fishery. Study results indicate that eutrophication (TSL>100), mainly caused by sewage from Marivan City and the surrounding rural areas has been the main reason for lake ecosystem degradation. DPSIR framework, as a novel approach in lake restoration, was applied to synthesize the study results of different disciplines in a

  5. Prebiotics increase heme iron bioavailability and do not affect non-heme iron bioavailability in humans.

    Weinborn, Valerie; Valenzuela, Carolina; Olivares, Manuel; Arredondo, Miguel; Weill, Ricardo; Pizarro, Fernando

    2017-05-24

    The aim of this study was to establish the effect of a prebiotic mix on heme and non-heme iron (Fe) bioavailability in humans. To this purpose, twenty-four healthy women were randomized into one of two study groups. One group ate one yogurt per day for 12 days with a prebiotic mix (prebiotic group) and the other group received the same yogurt but without the prebiotic mix (control group). Before and after the intake period, the subjects participated in Fe absorption studies. These studies used 55 Fe and 59 Fe radioactive isotopes as markers of heme Fe and non-heme Fe, respectively, and Fe absorption was measured by the incorporation of radioactive Fe into erythrocytes. The results showed that there were no significant differences in heme and non-heme Fe bioavailability in the control group. Heme Fe bioavailability of the prebiotic group increased significantly by 56% post-prebiotic intake. There were no significant differences in non-heme Fe bioavailability in this group. We concluded that daily consumption of a prebiotic mix increases heme Fe bioavailability and does not affect non-heme iron bioavailability.

  6. Evolution of alkaline lakes - Lake Van case study

    Tillman Meyer, Felix; Viehberg, Finn; Bahroun, Sonya; Wolf, Annabel; Immenhauser, Adrian; Kwiecien, Ola

    2017-04-01

    Lake Van in Eastern Anatolia (Turkey) is the largest terminal soda lake on Earth. The lake sedimentary profile covers ca. 600 ka (Stockhecke et al. 2014) Based on lithological changes, the presence of freshwater microfossils and close-to-freshwater pH value in the pore water, members of ICDP PALEOVAN concluded that Lake Van might have started as an open lake. Here we show paleontological and geochemical evidence in favour of this idea and constrain the time, when Lake Van likely transformed into a closed lake. Additionally we provide the first conceptual model of how this closure may have happened. Our archives of choice are inorganic and biogenic carbonates, separated by wet sieving. We identified microfossil assemblages (fraction > 125 µm) and performed high-resolution oxygen isotope (delta18O) and elemental (Mg/Ca, Sr/Ca) analyses of the fraction plants growing in the photic zone as food supply. These two aspects point to an increasing salinity in a shallowing lake. The delta18O values of inorganic carbonates are relatively low during the initial phase of Lake Van and increase abruptly (ca. 7‰) after 530 ka BP. At approximately the same time combination of Sr/Ca and Mg/Ca data suggest first occurrence of aragonite. Again, these findings suggest geochemical changes of the lake water concurrent with transition documented by microfossils. Comparison between Lake Van and Lake Ohrid (Lacey et al. 2016) delta18O data, precludes regional climate change (e.g.: increased evaporation) as the main driver of observed changes. With no evidence for increased volcanic or tectonic activity (e.g.: tephra layers, deformation structures, slumping) in the Lake Van sedimentary profile around 530 ka, it seems unlikely that a pyroclastic flow blocked the outflow of the lake. Alternatively, a portion of inflow has been diverged which might have caused a change in the hydrological balance and lake level falling below its outlet. However, as no geomorphological data confirming this

  7. Heme environment in HmuY, the heme-binding protein of Porphyromonas gingivalis

    Wojtowicz, Halina; Wojaczynski, Jacek; Olczak, Mariusz; Kroliczewski, Jaroslaw; Latos-Grazynski, Lechoslaw; Olczak, Teresa

    2009-01-01

    Porphyromonas gingivalis, a Gram-negative anaerobic bacterium implicated in the development and progression of chronic periodontitis, acquires heme for growth by a novel mechanism composed of HmuY and HmuR proteins. The aim of this study was to characterize the nature of heme binding to HmuY. The protein was expressed, purified and detailed investigations using UV-vis absorption, CD, MCD, and 1 H NMR spectroscopy were carried out. Ferric heme bound to HmuY may be reduced by sodium dithionite and re-oxidized by potassium ferricyanide. Heme complexed to HmuY, with a midpoint potential of 136 mV, is in a low-spin Fe(III) hexa-coordinate environment. Analysis of heme binding to several single and double HmuY mutants with the methionine, histidine, cysteine, or tyrosine residues replaced by an alanine residue identified histidines 134 and 166 as potential heme ligands.

  8. Heme environment in HmuY, the heme-binding protein of Porphyromonas gingivalis

    Wojtowicz, Halina [Laboratory of Biochemistry, Faculty of Biotechnology, University of Wroclaw, Tamka 2, 50-137 Wroclaw (Poland); Wojaczynski, Jacek [Department of Chemistry, University of Wroclaw, 50-383 Wroclaw (Poland); Olczak, Mariusz [Laboratory of Biochemistry, Faculty of Biotechnology, University of Wroclaw, Tamka 2, 50-137 Wroclaw (Poland); Kroliczewski, Jaroslaw [Laboratory of Biophysics, Faculty of Biotechnology, University of Wroclaw, 50-148 Wroclaw (Poland); Latos-Grazynski, Lechoslaw [Department of Chemistry, University of Wroclaw, 50-383 Wroclaw (Poland); Olczak, Teresa [Laboratory of Biochemistry, Faculty of Biotechnology, University of Wroclaw, Tamka 2, 50-137 Wroclaw (Poland)

    2009-05-29

    Porphyromonas gingivalis, a Gram-negative anaerobic bacterium implicated in the development and progression of chronic periodontitis, acquires heme for growth by a novel mechanism composed of HmuY and HmuR proteins. The aim of this study was to characterize the nature of heme binding to HmuY. The protein was expressed, purified and detailed investigations using UV-vis absorption, CD, MCD, and {sup 1}H NMR spectroscopy were carried out. Ferric heme bound to HmuY may be reduced by sodium dithionite and re-oxidized by potassium ferricyanide. Heme complexed to HmuY, with a midpoint potential of 136 mV, is in a low-spin Fe(III) hexa-coordinate environment. Analysis of heme binding to several single and double HmuY mutants with the methionine, histidine, cysteine, or tyrosine residues replaced by an alanine residue identified histidines 134 and 166 as potential heme ligands.

  9. Mechanisms of heme utilization by Francisella tularensis.

    Helena Lindgren

    Full Text Available Francisella tularensis is a highly virulent facultative intracellular pathogen causing the severe disease tularemia in mammals. As for other bacteria, iron is essential for its growth but very few mechanisms for iron acquisition have been identified. Here, we analyzed if and how F. tularensis can utilize heme, a major source of iron in vivo. This is by no means obvious since the bacterium lacks components of traditional heme-uptake systems. We show that SCHU S4, the prototypic strain of subspecies tularensis, grew in vitro with heme as the sole iron source. By screening a SCHU S4 transposon insertion library, 16 genes were identified as important to efficiently utilize heme, two of which were required to avoid heme toxicity. None of the identified genes appeared to encode components of a potential heme-uptake apparatus. Analysis of SCHU S4 deletion mutants revealed that each of the components FeoB, the siderophore system, and FupA, contributed to the heme-dependent growth. In the case of the former two systems, iron acquisition was impaired, whereas the absence of FupA did not affect iron uptake but led to abnormally high binding of iron to macromolecules. Overall, the present study demonstrates that heme supports growth of F. tularensis and that the requirements for the utilization are highly complex and to some extent novel.

  10. Identification of the Mitochondrial Heme Metabolism Complex.

    Medlock, Amy E; Shiferaw, Mesafint T; Marcero, Jason R; Vashisht, Ajay A; Wohlschlegel, James A; Phillips, John D; Dailey, Harry A

    2015-01-01

    Heme is an essential cofactor for most organisms and all metazoans. While the individual enzymes involved in synthesis and utilization of heme are fairly well known, less is known about the intracellular trafficking of porphyrins and heme, or regulation of heme biosynthesis via protein complexes. To better understand this process we have undertaken a study of macromolecular assemblies associated with heme synthesis. Herein we have utilized mass spectrometry with coimmunoprecipitation of tagged enzymes of the heme biosynthetic pathway in a developing erythroid cell culture model to identify putative protein partners. The validity of these data obtained in the tagged protein system is confirmed by normal porphyrin/heme production by the engineered cells. Data obtained are consistent with the presence of a mitochondrial heme metabolism complex which minimally consists of ferrochelatase, protoporphyrinogen oxidase and aminolevulinic acid synthase-2. Additional proteins involved in iron and intermediary metabolism as well as mitochondrial transporters were identified as potential partners in this complex. The data are consistent with the known location of protein components and support a model of transient protein-protein interactions within a dynamic protein complex.

  11. Using Satellite Imagery to Monitor the Major Lakes; Case Study Lake Hamun

    Norouzi, H.; Islam, R.; Bah, A.; AghaKouchak, A.

    2015-12-01

    Proper lakes function can ease the impact of floods and drought especially in arid and semi-arid regions. They are important environmentally and can directly affect human lives. Better understanding of the effect of climate change and human-driven changes on lakes would provide invaluable information for policy-makers and local people. As part of a comprehensive study, we aim to monitor the land-cover/ land-use changes in the world's major lakes using satellite observations. As a case study, Hamun Lake which is a pluvial Lake, also known as shallow Lake, located on the south-east of Iran and adjacent to Afghanistan, and Pakistan borders is investigated. The Lake is the main source of resources (agriculture, fishing and hunting) for the people around it and politically important in the region since it is shared among three different countries. The purpose of the research is to find the Lake's area from 1972 to 2015 and to see if any drought or water resources management has affected the lake. Analyzing satellites imagery from Landsat shows that the area of the Lake changes seasonally and intra-annually. Significant seasonal effects are found in 1975,1977, 1987, 1993, 1996, 1998, 2000, 2009 and 2011, as well as, substantial amount of shallow water is found throughout the years. The precipitation records as well as drought historical records are studied for the lake's basin. Meteorological studies suggest that the drought, decrease of rainfalls in the province and the improper management of the Lake have caused environmental, economic and geographical consequences. The results reveal that lake has experienced at least two prolong dryings since 1972 which drought cannot solely be blamed as main forcing factor.Proper lakes function can ease the impact of floods and drought especially in arid and semi-arid regions. They are important environmentally and can directly affect human lives. Better understanding of the effect of climate change and human-driven changes on lakes

  12. Stable isotope and hydrogeochemical studies of Beaver Lake and Radok Lake, MacRobertson Land, East Antarctica

    Wand, U.; Hermichen, W.D.

    1988-01-01

    Beaver Lake and Radok Lake, the largest known epishelf lake and the deepest freshwater lake on the Antarctic continent, respectively, were isotopically (δ 2 H, δ 18 O) and hydrogeochemically studied. Radok Lake is an isothermal and nonstratified, i.e. homogeneous water body, while Beaver Lake is stratified with respect to temperature, salinity and isotopic composition. The results for the latter attest to freshwater (derived from snow and glacier melt) overlying seawater. (author)

  13. The effect of proteins from animal source foods on heme iron bioavailability in humans.

    Pizarro, Fernando; Olivares, Manuel; Valenzuela, Carolina; Brito, Alex; Weinborn, Valerie; Flores, Sebastián; Arredondo, Miguel

    2016-04-01

    Forty-five women (35-45 year) were randomly assigned to three iron (Fe) absorption sub-studies, which measured the effects of dietary animal proteins on the absorption of heme Fe. Study 1 was focused on heme, red blood cell concentrate (RBCC), hemoglobin (Hb), RBCC+beef meat; study 2 on heme, heme+fish, chicken, and beef; and study 3 on heme and heme+purified animal protein (casein, collagen, albumin). Study 1: the bioavailability of heme Fe from Hb was similar to heme only (∼13.0%). RBCC (25.0%) and RBCC+beef (21.3%) were found to be increased 2- and 1.6-fold, respectively, when compared with heme alone (pProteins from animal source foods and their digestion products did not enhance heme Fe absorption. Copyright © 2015. Published by Elsevier Ltd.

  14. Outflows of groundwater in lakes: case study of Lake Raduńske Górne

    Cieśliński Roman

    2014-12-01

    Full Text Available The aim of the study was to locate and describe groundwater outflows in a selected lake basin. The study hypothesis was based on the fact that, according to the specialist literature, one of the forms of lake water supply is through groundwater outflows. It was also assumed that the lakes of the Kashubian Lake District are characterised by such a form of lake water supply. The time scope of the work included the period from January 2011 to September 2012. The spatial scope of the work included the area of Lake Raduńskie Górne, located in the Kashubian Lake District in north Poland. The research plot was in the north-eastern part of the lake. Office works were aimed at gathering and studying source materials and maps. Cartographic materials were analysed with the use of the MapInfo Professional 9.5. The purpose of the field work was to find the groundwater outflows in the basin of Lake Raduńskie Górne. During the field research diving was carried out in the lake. During the dive audiovisual documentation was conducted using a Nikon D90 camera with Ikelite underwater housing for Nikon D90 and an Ikelite DS 161 movie substrobe, as well as a GoPro HD HERO 2 Outdoor camera. During the project, four groundwater outflows were found. In order to examine these springs audiovisual and photographic documentation was made. To systematise the typology of the discovered springs, new nomenclature was suggested, namely under-lake springs with subtypes: an under-lake slope spring and under-lake offshore spring

  15. Comparative study of enzyme activity and heme reactivity in Drosophila melanogaster and Homo sapiens cystathionine β-synthases.

    Su, Yang; Majtan, Tomas; Freeman, Katherine M; Linck, Rachel; Ponter, Sarah; Kraus, Jan P; Burstyn, Judith N

    2013-01-29

    Cystathionine β-synthase (CBS) is the first and rate-limiting enzyme in the transsulfuration pathway, which is critical for the synthesis of cysteine from methionine in eukaryotes. CBS uses coenzyme pyridoxal 5'-phosphate (PLP) for catalysis, and S-adenosylmethionine regulates the activity of human CBS, but not yeast CBS. Human and fruit fly CBS contain heme; however, the role for heme is not clear. This paper reports biochemical and spectroscopic characterization of CBS from fruit fly Drosophila melanogaster (DmCBS) and the CO/NO gas binding reactions of DmCBS and human CBS. Like CBS enzymes from lower organisms (e.g., yeast), DmCBS is intrinsically highly active and is not regulated by AdoMet. The DmCBS heme coordination environment, the reactivity, and the accompanying effects on enzyme activity are similar to those of human CBS. The DmCBS heme bears histidine and cysteine axial ligands, and the enzyme becomes inactive when the cysteine ligand is replaced. The Fe(II) heme in DmCBS is less stable than that in human CBS, undergoing more facile reoxidation and ligand exchange. In both CBS proteins, the overall stability of the protein is correlated with the heme oxidation state. Human and DmCBS Fe(II) hemes react relatively slowly with CO and NO, and the rate of the CO binding reaction is faster at low pH than at high pH. Together, the results suggest that heme incorporation and AdoMet regulation in CBS are not correlated, possibly providing two independent means for regulating the enzyme.

  16. Stable isotope and hydrogeochemical studies of Beaver Lake and Lake Radok, MacRobertson Land, East Antarctica

    Wand, U.; Hermichen, W.D.; Hoefling, R.; Muehle, K.

    1987-01-01

    Beaver Lake and Lake Radok, the largest known epishelf and the deepest freshwater lake on the Antarctic continent, respectively, were isotopically (δ 2 H, δ 18 O) and hydrogeochemically studied. Lake Radok is an isothermal and non-stratified, i.e. homogeneous water body, while Beaver Lake is stratified with respect to temperature, salinity and isotopic composition. The results for the latter attest to freshwater (derived from snow and glacier melt) overlying seawater. (author)

  17. Study of pollution in Rawal lake

    Ahmad, M.; Khan, M.I.A.; Nisar, M.; Kaleem, M.Y.

    1999-01-01

    It was intended to establish effects of pollution on quality of water of Rawal Lake, Islamabad. Six stations were located for collection of water. The data collected and analyzed so far indicated increasing pollution in the lake Increase in growth of hydrophytes in quite evident, leading towards process of eutrophication of the lake. (author)

  18. Heme and non-heme iron transporters in non-polarized and polarized cells

    Yasui Yumiko

    2010-06-01

    Full Text Available Abstract Background Heme and non-heme iron from diet, and recycled iron from hemoglobin are important products of the synthesis of iron-containing molecules. In excess, iron is potentially toxic because it can produce reactive oxygen species through the Fenton reaction. Humans can absorb, transport, store, and recycle iron without an excretory system to remove excess iron. Two candidate heme transporters and two iron transporters have been reported thus far. Heme incorporated into cells is degraded by heme oxygenases (HOs, and the iron product is reutilized by the body. To specify the processes of heme uptake and degradation, and the reutilization of iron, we determined the subcellular localizations of these transporters and HOs. Results In this study, we analyzed the subcellular localizations of 2 isoenzymes of HOs, 4 isoforms of divalent metal transporter 1 (DMT1, and 2 candidate heme transporters--heme carrier protein 1 (HCP1 and heme responsive gene-1 (HRG-1--in non-polarized and polarized cells. In non-polarized cells, HCP1, HRG-1, and DMT1A-I are located in the plasma membrane. In polarized cells, they show distinct localizations: HCP1 and DMT1A-I are located in the apical membrane, whereas HRG-1 is located in the basolateral membrane and lysosome. 16Leu at DMT1A-I N-terminal cytosolic domain was found to be crucial for plasma membrane localization. HOs are located in smooth endoplasmic reticulum and colocalize with NADPH-cytochrome P450 reductase. Conclusions HCP1 and DMT1A-I are localized to the apical membrane, and HRG-1 to the basolateral membrane and lysosome. These findings suggest that HCP1 and DMT1A-I have functions in the uptake of dietary heme and non-heme iron. HRG-1 can transport endocytosed heme from the lysosome into the cytosol. These localization studies support a model in which cytosolic heme can be degraded by HOs, and the resulting iron is exported into tissue fluids via the iron transporter ferroportin 1, which is

  19. Mortality from different causes associated with meat, heme iron, nitrates, and nitrites in the NIH-AARP Diet and Health Study: population based cohort study

    Sinha, Rashmi; Ward, Mary H; Graubard, Barry I; Inoue-Choi, Maki; Dawsey, Sanford M; Abnet, Christian C

    2017-01-01

    Objective To determine the association of different types of meat intake and meat associated compounds with overall and cause specific mortality. Design Population based cohort study. Setting Baseline dietary data of the NIH-AARP Diet and Health Study (prospective cohort of the general population from six states and two metropolitan areas in the US) and 16 year follow-up data until 31 December 2011. Participants 536 969 AARP members aged 50-71 at baseline. Exposures Intake of total meat, processed and unprocessed red meat (beef, lamb, and pork) and white meat (poultry and fish), heme iron, and nitrate/nitrite from processed meat based on dietary questionnaire. Adjusted Cox proportional hazards regression models were used with the lowest fifth of calorie adjusted intakes as reference categories. Main outcome measure Mortality from any cause during follow-up. Results An increased risk of all cause mortality (hazard ratio for highest versus lowest fifth 1.26, 95% confidence interval 1.23 to 1.29) and death due to nine different causes associated with red meat intake was observed. Both processed and unprocessed red meat intakes were associated with all cause and cause specific mortality. Heme iron and processed meat nitrate/nitrite were independently associated with increased risk of all cause and cause specific mortality. Mediation models estimated that the increased mortality associated with processed red meat was influenced by nitrate intake (37.0-72.0%) and to a lesser degree by heme iron (20.9-24.1%). When the total meat intake was constant, the highest fifth of white meat intake was associated with a 25% reduction in risk of all cause mortality compared with the lowest intake level. Almost all causes of death showed an inverse association with white meat intake. Conclusions The results show increased risks of all cause mortality and death due to nine different causes associated with both processed and unprocessed red meat, accounted for, in part, by

  20. Mononuclear non-heme iron enzymes with the 2-His-1-carboxylate facial triad: recent developments in enzymology and modeling studies.

    Bruijnincx, Pieter C A; van Koten, Gerard; Klein Gebbink, Robertus J M

    2008-12-01

    Iron-containing enzymes are one of Nature's main means of effecting key biological transformations. The mononuclear non-heme iron oxygenases and oxidases have received the most attention recently, primarily because of the recent availability of crystal structures of many different enzymes and the stunningly diverse oxidative transformations that these enzymes catalyze. The wealth of available structural data has furthermore established the so-called 2-His-1-carboxylate facial triad as a new common structural motif for the activation of dioxygen. This superfamily of mononuclear iron(ii) enzymes catalyzes a wide range of oxidative transformations, ranging from the cis-dihydroxylation of arenes to the biosynthesis of antibiotics such as isopenicillin and fosfomycin. The remarkable scope of oxidative transformations seems to be even broader than that associated with oxidative heme enzymes. Not only are many of these oxidative transformations of key biological importance, many of these selective oxidations are also unprecedented in synthetic organic chemistry. In this critical review, we wish to provide a concise background on the chemistry of the mononuclear non-heme iron enzymes characterized by the 2-His-1-carboxylate facial triad and to discuss the many recent developments in the field. New examples of enzymes with unique reactivities belonging to the superfamily have been reported. Furthermore, key insights into the intricate mechanistic details and reactive intermediates have been obtained from both enzyme and modeling studies. Sections of this review are devoted to each of these subjects, i.e. the enzymes, biomimetic models, and reactive intermediates (225 references).

  1. Heme metabolism as an integral part of iron homeostasis

    Paweł Lipiński

    2014-01-01

    Full Text Available Heme, a ferrous iron protoporphyrin IX complex, is employed as a prosthetic group in a number of diverse heme proteins that participate in important cellular and systemic physiological processes. Provision of an adequate amount of iron for heme biosynthesis is one of the elemental hallmarks of intracellular iron homeostasis. In the cell the bioavailability of iron for the two main iron biological pathways – heme synthesis and the biogenesis of iron-sulfur clusters ([Fe-S] – is mainly regulated by the IRP/IRE posttranscriptional system. The biogenesis of [Fe-S] centers is crucial for heme synthesis because these co-factors determine the activity of IRP1 and that of ferrochelatase, an enzyme responsible for the insertion of an iron into protoporphyrin IX to produce heme. On the other hand, delivery of iron for heme and hemoglobin synthesis in erythroblasts, precursors of erythrocytes in bone marrow, is an indispensable element of body iron homeostasis. This process relies on the recovery of iron from senescent red blood cells through the enzymatic degradation of heme molecules and recycling of iron to the circulation. Molecular coordination of these processes involves the activity of heme oxygenase 1, IRP1 and IRP2 as well as the functioning of the hepcidin-ferroportin regulatory axis. Recent studies show in mammals the existence of an expanded system of proteins involved in the transport of intact heme molecules at the cellular and systemic levels. The biological role of this system is of particular importance when the concentration of free heme reaches a toxic level in the body (intravascular hemolysis as well as locally in cells having intensive heme metabolism such as erythroblasts and macrophages.

  2. [Heme metabolism as an integral part of iron homeostasis].

    Lipiński, Paweł; Starzyński, Rafał R; Styś, Agnieszka; Gajowiak, Anna; Staroń, Robert

    2014-01-02

    Heme, a ferrous iron protoporphyrin IX complex, is employed as a prosthetic group in a number of diverse heme proteins that participate in important cellular and systemic physiological processes. Provision of an adequate amount of iron for heme biosynthesis is one of the elemental hallmarks of intracellular iron homeostasis. In the cell the bioavailability of iron for the two main iron biological pathways--heme synthesis and the biogenesis of iron-sulfur clusters ([Fe-S])--is mainly regulated by the IRP/IRE posttranscriptional system. The biogenesis of [Fe-S] centers is crucial for heme synthesis because these co-factors determine the activity of IRP1 and that of ferrochelatase, an enzyme responsible for the insertion of an iron into protoporphyrin IX to produce heme. On the other hand, delivery of iron for heme and hemoglobin synthesis in erythroblasts, precursors of erythrocytes in bone marrow, is an indispensable element of body iron homeostasis. This process relies on the recovery of iron from senescent red blood cells through the enzymatic degradation of heme molecules and recycling of iron to the circulation. Molecular coordination of these processes involves the activity of heme oxygenase 1, IRP1 and IRP2 as well as the functioning of the hepcidin-ferroportin regulatory axis. Recent studies show in mammals the existence of an expanded system of proteins involved in the transport of intact heme molecules at the cellular and systemic levels. The biological role of this system is of particular importance when the concentration of free heme reaches a toxic level in the body (intravascular hemolysis) as well as locally in cells having intensive heme metabolism such as erythroblasts and macrophages.

  3. Value Assessment of Artificial Wetland Derived from Mining Subsided Lake: A Case Study of Jiuli Lake Wetland in Xuzhou

    Laijian Wang; Lachun Wang; Pengcheng Yin; Haiyang Cui; Longwu Liang; Zhenbo Wang

    2017-01-01

    Mining subsided lakes are major obstacles for ecological restoration and resource reuse in mining regions. Transforming mining subsided lakes into artificial wetlands is an ecological restoration approach that has been attempted in China in recent years, but a value assessment of the approach still needs systematic research. This paper considers Jiuli Lake wetland, an artificial wetland derived from restoration of a mining subsided lake in plain area, as a case study. A value assessment model...

  4. Heme oxygenase activity correlates with serum indices of iron homeostasis in healthy nonsmokers

    Heme oxygenase (HO) catalyzes the breakdown of heme to carbon monoxide, iron, and biliverdin. While the use of genetically altered animal models in investigation has established distinct associations between HO activity and systemic iron availability, studies have not yet confirm...

  5. Relationship between natural and heme-mediated antibody polyreactivity

    Hadzhieva, Maya; Vassilev, Tchavdar [Stephan Angelov Institute of Microbiology, Bulgarian Academy of Sciences, Sofia 1113 (Bulgaria); Bayry, Jagadeesh; Kaveri, Srinivas; Lacroix-Desmazes, Sébastien [Sorbonne Universités, UPMC Univ Paris 06, UMR-S 1138, Centre de Recherche des Cordeliers, F-75006 Paris (France); INSERM, UMR-S 1138, F-75006 Paris (France); Université Paris Descartes, Sorbonne Paris Cité, UMR-S 1138, F-75006 Paris (France); Dimitrov, Jordan D., E-mail: jordan.dimitrov@crc.jussieu.fr [Sorbonne Universités, UPMC Univ Paris 06, UMR-S 1138, Centre de Recherche des Cordeliers, F-75006 Paris (France); INSERM, UMR-S 1138, F-75006 Paris (France); Université Paris Descartes, Sorbonne Paris Cité, UMR-S 1138, F-75006 Paris (France)

    2016-03-25

    Polyreactive antibodies represent a considerable fraction of the immune repertoires. Some antibodies acquire polyreactivity post-translationally after interaction with various redox-active substances, including heme. Recently we have demonstrated that heme binding to a naturally polyreactive antibody (SPE7) results in a considerable broadening of the repertoire of recognized antigens. A question remains whether the presence of certain level of natural polyreactivity of antibodies is a prerequisite for heme-induced further extension of antigen binding potential. Here we used a second monoclonal antibody (Hg32) with unknown specificity and absence of intrinsic polyreactivity as a model to study the potential of heme to induce polyreactivity of antibodies. We demonstrated that exposure to heme greatly extends the antigen binding potential of Hg32, suggesting that the intrinsic binding promiscuity is not a prerequisite for the induction of polyreactivity by heme. In addition we compared the kinetics and thermodynamics of the interaction of heme-exposed antibodies with a panel of unrelated antigens. These analyses revealed that the two heme-sensitive antibodies adopt different mechanisms of binding to the same set of antigens. This study contributes to understanding the phenomenon of induced antibody polyreactivity. The data may also be of importance for understanding of physiological and pathological roles of polyreactive antibodies. - Highlights: • Exposure of certain monoclonal IgE antibodies to heme results in gain of antigen binding polyreactivity. • Natural polyreactivity of antibodies is dispensable for acquisition of polyreactivity through interaction with heme. • Heme-induced monoclonal IgE antibodies differ in their thermodynamic mechanisms of antigen recognition.

  6. Differential Control of Heme Reactivity in Alpha and Beta Subunits of Hemoglobin: A Combined Raman Spectroscopic and Computational Study

    2015-01-01

    The use of hybrid hemoglobin (Hb), with mesoheme substituted for protoheme, allows separate monitoring of the α or β hemes along the allosteric pathway. Using resonance Raman (rR) spectroscopy in silica gel, which greatly slows protein motions, we have observed that the Fe–histidine stretching frequency, νFeHis, which is a monitor of heme reactivity, evolves between frequencies characteristic of the R and T states, for both α or β chains, prior to the quaternary R–T and T–R shifts. Computation of νFeHis, using QM/MM and the conformational search program PELE, produced remarkable agreement with experiment. Analysis of the PELE structures showed that the νFeHis shifts resulted from heme distortion and, in the α chain, Fe–His bond tilting. These results support the tertiary two-state model of ligand binding (Henry et al., Biophys. Chem.2002, 98, 149). Experimentally, the νFeHis evolution is faster for β than for α chains, and pump–probe rR spectroscopy in solution reveals an inflection in the νFeHis time course at 3 μs for β but not for α hemes, an interval previously shown to be the first step in the R–T transition. In the α chain νFeHis dropped sharply at 20 μs, the final step in the R–T transition. The time courses are fully consistent with recent computational mapping of the R–T transition via conjugate peak refinement by Karplus and co-workers (Fischer et al., Proc. Natl. Acad. Sci. U. S. A.2011, 108, 5608). The effector molecule IHP was found to lower νFeHis selectively for α chains within the R state, and a binding site in the α1α2 cleft is suggested. PMID:24991732

  7. Concentration dynamics in lakes and reservoirs. Studies using radioactive tracers

    Gilath, Ch.

    1983-01-01

    The use of radioactive tracers for the investigation of concentration dynamics of inert soluble matter in lakes and reservoirs is reviewed. Shallow and deep stratified lakes are considered. The mechanism of mixing in lakes, flow pattern and input - output response are discussed. The methodology of the use of radioactive tracers for concentration dynamic studies is described. Examples of various investigations are reviewed. The dynamics of shallow lakes can be found and expressed in terms of transfer functions, axial dispersion models, residence time distributions and sometimes only semiquantitative information about the flow pattern. The dynamics of deep, stratified lakes is more complex and difficult to investigate with tracers. Flow pattern, horizontal and vertical eddy diffusivities, mass transfer between the hypolimnion and epilimnion are tools used for describing this dynamics. (author)

  8. Physicochemical studies on Uburu Salt Lake Ebonyi State-Nigeria.

    Akubugwo, I E; Ofoegbu, C J; Ukwuoma, C U

    2007-09-15

    Physicochemical properties of soil (sediment) and water from Uburu salt lake were evaluated and compared with control soil and surface water from the same community. Results showed significant (p copper, lead and zinc in the lake water relative to the control. The values of these metals in the lake soil (sediments) however, were significantly (p potassium, nitrate, carbonate, sulphate and phosphate levels compared to the control. Significant (p < 0.05) changes were also noted in the lake soil's pH, exchangeable acidity, nitrogen, organic carbon, calcium and magnesium levels. Also the soil texture was affected relative to the control. In a number of cases, the values of the studied parameters were higher than the permissible WHO standards. In view of these findings, cautious use of the salt lake soil and water is advocated.

  9. Dietary heme-mediated PPARα activation does not affect the heme-induced epithelial hyperproliferation and hyperplasia in mouse colon.

    Noortje Ijssennagger

    Full Text Available Red meat consumption is associated with an increased colon cancer risk. Heme, present in red meat, injures the colon surface epithelium by luminal cytotoxicity and reactive oxygen species. This surface injury is overcompensated by hyperproliferation and hyperplasia of crypt cells. Transcriptome analysis of mucosa of heme-fed mice showed, besides stress- and proliferation-related genes, many upregulated lipid metabolism-related PPARα target genes. The aim of this study was to investigate the role of PPARα in heme-induced hyperproliferation and hyperplasia. Male PPARα KO and WT mice received a purified diet with or without heme. As PPARα is proposed to protect against oxidative stress and lipid peroxidation, we hypothesized that the absence of PPARα leads to more surface injury and crypt hyperproliferation in the colon upon heme-feeding. Heme induced luminal cytotoxicity and lipid peroxidation and colonic hyperproliferation and hyperplasia to the same extent in WT and KO mice. Transcriptome analysis of colonic mucosa confirmed similar heme-induced hyperproliferation in WT and KO mice. Stainings for alkaline phosphatase activity and expression levels of Vanin-1 and Nrf2-targets indicated a compromised antioxidant defense in heme-fed KO mice. Our results suggest that the protective role of PPARα in antioxidant defense involves the Nrf2-inhibitor Fosl1, which is upregulated by heme in PPARα KO mice. We conclude that PPARα plays a protective role in colon against oxidative stress, but PPARα does not mediate heme-induced hyperproliferation. This implies that oxidative stress of surface cells is not the main determinant of heme-induced hyperproliferation and hyperplasia.

  10. Dibromine radical anion reactions with heme enzymes

    Gebicka, L.; Gebicki, J.L.

    1996-01-01

    Reactions of Br 2 radical anion with heme enzymes, catalase horseradish peroxidase, have been studied by pulse radiolysis. It has been found that Br 2 - does not react with the heme centre of investigated enzymes. Dibromine radical anion reacts with tryptophan residues of catalase without any influence on the activity of catalase. It is suggested that in pulse radiolysis studies, where horseradish peroxidase is at about tenfold excess toward Br 2 - , the enzyme is modified rather by Br 2 , than by Br 2 - . (author). 26 refs., 3 figs

  11. Kidney injury and heme oxygenase-1

    Hai-xing MAI

    2012-02-01

    Full Text Available     Heme oxygenase-1 (HO-1 is one of the main pathways to degrade heme in mammals, and the main degradation products are free iron (Fe2+, carbon monoxide (CO, and bilirubin. Heme plays an important role in promoting cell survival, circulation of intracellular substrates, and immune regulation. Previous studies suggest that HO-1 pathway is an important internal factor in determining the susceptibility and severity of acute kidney injury (AKI. The induction of HO-1 expression can attenuate the severity of renal ischemia-reperfusion injury (IRI, and the inhibition of HO-1 expression will aggravate IRI. The present article summarizes the latest advances in research abroad and at home on protective mechanism by which HO-1 prevents AKI to further deepen our understanding of the role of HO-1 in the treatment of AKI.   

  12. Red and processed meat, nitrite, and heme iron intakes and postmenopausal breast cancer risk in the NIH-AARP Diet and Health Study

    Inoue-Choi, Maki; Sinha, Rashmi; Gierach, Gretchen L.; Ward, Mary H.

    2015-01-01

    Previous studies have shown inconsistent associations between red and processed meat intake and breast cancer risk. N-nitroso compounds and heme iron have been hypothesized as contributing factors. We followed 193,742 postmenopausal women in the NIH-AARP Diet and Health Study and identified 9,305 incident breast cancers (1995–2006). Dietary intake was assessed using a food frequency questionnaire at baseline. We adjusted daily intakes of meat, nitrite, and heme iron for energy intake using the nutrient density method. We estimated multivariable-adjusted hazard ratios (HR) and 95% confidence intervals (CI) by quintiles of dietary exposures for all breast cancer, by stage (in-situ, localized, regional/distant), and by estrogen/progesterone receptor (ER/PR) status using Cox proportional hazards regression. Total red meat intake was positively associated with risk of regional/distant cancer (p-trend=0.02). The risk was 25% higher in the highest vs. lowest intake quintile (95%CI=1.03–1.52). Higher processed red meat intake (Q5 vs. Q1) was associated with 27% higher risk of localized breast cancer (95%CI=1.01–1.27, p-trend=0.03) and a 19% higher risk of regional/distant cancer (95%CI=0.98–1.44, p-trend=0.10). In addition, higher nitrite intake from processed red meat was positively associated with localized cancer (HR for Q5 vs. Q1=1.23, 95%CI=1.09–1.39, p-trendmeat and processed meat may increase risk of postmenopausal breast cancer. Added nitrite and heme iron may partly contribute to these observed associations. PMID:26505173

  13. Evaluation of Water Quality in Shallow Lakes, Case Study of Lake Uluabat

    Saadet İLERİ

    2014-04-01

    Full Text Available Lake Uluabat, located 20 km south of the Marmara Sea, between 42° 12' North latitude, 28° 40'East longitude and is located in the province of Bursa. The Lake is one of the richest lakes in terms of aquatic plants besides fish and bird populations in Turkey. In this study, water quality of the Lake was monitored from June 2008 to May 2009 during the 12 month period with the samples taken from 8 points in the lake and spatial and temporal variations of the parameters were examined. pH, temperature (T, electrical conductivity (EC, dissolved oxygen (DO, suspended solids (SS, secchi depth (SD, water level (WL, nitrate nitrogen (NO3-N, total nitrogen (TN, phosphate-phosphorus (PO4-P, total phosphorus (TP, alkalinity, chemical oxygen demand (COD and chlorophyll-a (Chl-a were the monitoring parameters. As a result, concentrations of the parameters were found at high levels especially the 1st, 4th, 5th, and 8th stations and temporally were found at high levels often in the summer. According to the results of analysis of variance, regional and temporal variations of all parameters were found important except SS and NO3-N

  14. Treating floodplain lakes of large rivers as study units for variables that vary within lakes; an evaluation using chlorophyll a and inorganic suspended solids data from floodplain lakes of the Upper Mississippi River

    Gray, B.R.; Rogala, J.R.; Houser, J.N.

    2013-01-01

    Contiguous floodplain lakes ('lakes') have historically been used as study units for comparative studies of limnological variables that vary within lakes. The hierarchical nature of these studies implies that study variables may be correlated within lakes and that covariate associations may differ not only among lakes but also by spatial scale. We evaluated the utility of treating lakes as study units for limnological variables that vary within lakes based on the criteria of important levels of among-lake variation in study variables and the observation of covariate associations that vary among lakes. These concerns were selected, respectively, to ensure that lake signatures were distinguishable from within-lake variation and that lake-scale effects on covariate associations might provide inferences not available by ignoring those effects. Study data represented chlorophyll a (CHL) and inorganic suspended solids (ISS) data from lakes within three reaches of the Upper Mississippi River. Sampling occurred in summer from 1993 through 2005 (except 2003); numbers of lakes per reach varied from 7 to 19, and median lake area varied from 53 to 101 ha. CHL and ISS levels were modelled linearly, with lake, year and lake x year effects treated as random. For all reaches, the proportions of variation in CHL and ISS attributable to differences among lakes (including lake and lake x year effects) were substantial (range: 18%-73%). Finally, among-lake variation in CHL and ISS was strongly associated with covariates and covariate effects that varied by lakes or lake-years (including with vegetation levels and, for CHL, log(ISS)). These findings demonstrate the utility of treating floodplain lakes as study units for the study of limnological variables and the importance of addressing hierarchy within study designs when making inferences from data collected within floodplain lakes.

  15. Interaction of chloroquine and its analogues with heme: An isothermal titration calorimetric study.

    Bachhawat, K; Thomas, C J; Surolia, N; Surolia, A

    2000-10-05

    Quinoline-containing drugs such as chloroquine and quinine have had a long and successful history in antimalarial chemotherapy. Identification of ferriprotoporphyrin IX ([Fe(III)PPIX], haematin) as the drug receptors for these antimalarials called for investigations of the binding affinity, mode of interaction, and the conditions affecting the interaction. The parameters obtained are significant in recent times with the emergence of chloroquine resistant strains of the malaria parasites. This has underlined the need to unravel the molecular mechanism of their action so as to meet the requirement of an alternative to the existing antimalarial drugs. The isothermal titration calorimetric studies on the interaction of chloroquine with haematin lead us to propose an altered mode of binding. The initial recognition is ionic in nature mediated by the propionyl group of haematin with the quaternary nitrogen on CQ. This ionic interaction induces a conformational change, such as to favour binding of subsequent CQ molecules. On the contrary, conditions emulating the cytosolic environment (pH 7.4 and 150 mM salt) reveal the hydrophobic force to be the sole contributor driving the interaction. Interaction of a carefully selected panel of quinoline antimalarial drugs with monomeric ferriprotoporphyrin IX has also been investigated at pH 5.6 mimicking the acidic environment prevalent in the food vacuoles of parasite, the center of drug activity, which are consistent with their antimalarial activity. Copyright 2000 Academic Press.

  16. Role of heme in bromine-induced lung injury

    Lam, Adam; Vetal, Nilam; Matalon, Sadis; Aggarwal, Saurabh

    2016-01-01

    Bromine (Br2) gas inhalation poses an environmental and occupational hazard resulting in high morbidity and mortality. In this review, we underline the acute lung pathology (within 24 hours of exposure) and potential therapeutic interventions that may be utilized to mitigate Br2-induced human toxicity. We will discuss our latest published data, which suggests that an increase in heme-dependent tissue injury underlies the pathogenesis of Br2 toxicity. Our study was based on previous findings that demonstrated that Br2 upregulates the heme-degrading enzyme heme oxygenase-1 (HO-1), which converts toxic heme into billiverdin. Interestingly, following Br2 inhalation, heme levels were indeed elevated in bronchoalveolar lavage fluid, plasma, and whole lung tissue in C57BL/6 mice. High heme levels correlated with increased lung oxidative stress, lung inflammation, respiratory acidosis, lung edema, higher airway resistance, and mortality. However, therapeutic reduction of heme levels, by either scavenging with hemopexin or degradation by HO-1, improved lung function and survival. Therefore, heme attenuation may prove a useful adjuvant therapy to treat patients after Br2 exposure. PMID:27244263

  17. Identification of the receptor scavenging hemopexin-heme complexes

    Hvidberg, Vibeke; Maniecki, Maciej B; Jacobsen, Christian

    2005-01-01

    and is suggested to facilitate cellular heme metabolism. Using a ligand-affinity approach, we purified the human hemopexin-heme receptor and identified it as the low-density lipoprotein receptor-related protein (LRP)/CD91, a receptor expressed in several cell types including macrophages, hepatocytes, neurons......, and syncytiotrophoblasts. Binding experiments, including Biacore analysis, showed that hemopexin-heme complex formation elicits the high receptor affinity. Uptake studies of radio-labeled hemopexin-heme complex in LRP/CD91-expressing COS cells and confocal microscopy of the cellular processing of fluorescent hemopexin......-heme complexes are removed by a receptor-mediated pathway showing striking similarities to the CD163-mediated haptoglobin-hemoglobin clearance in macrophages. Furthermore, the data indicate a hitherto unknown role of LRP/CD91 in inflammation....

  18. Hydrochemical and isotope study of Lake Titicaca

    Gonfiantini, R.; Cioni, R.; Paredes, M.

    2002-01-01

    The chemical and isotopic compositions of Lake Titicaca and its inflow waters (precipitation, tributaries, groundwater) were determined with the aim of establishing the lake chemical and isotope balance. The three main regions of the lake, i.e. the Lago Mayor, the eastern and the western basins of Lago Menor, connected in cascade, show significant chemical and isotopic differences. Chloride and sodium balance indicates that an average of about 92% of the inflow water evaporates, and the remaining 8 % is lost through Rio Desaguadero and infiltration. The balance of each basin is also obtained, including the inter-basin fluxes. The stable isotope balance in not possible because no data are available on the mean atmospheric vapour isotopic composition. However, this was tentatively computed using the fluxes obtained from chemistry. The vapour δ-values are slightly more negative than those of rainfall. Tritium, noble gases and chloro-fluoro-carbons in vertical profiles show that the lake is vertically well mixed and there is no water segregation at depth. (author)

  19. Heme Synthesis and Acquisition in Bacterial Pathogens

    Choby, Jacob E.; Skaar, Eric P.

    2016-01-01

    Bacterial pathogens require the iron-containing cofactor heme to cause disease. Heme is essential to the function of hemoproteins, which are involved in energy generation by the electron transport chain, detoxification of host immune effectors, and other processes. During infection, bacterial pathogens must synthesize heme or acquire heme from the host; however, host heme is sequestered in high-affinity hemoproteins. Pathogens have evolved elaborate strategies to acquire heme from host source...

  20. Heme isomers substantially affect heme's electronic structure and function

    Kepp, Kasper Planeta

    2017-01-01

    Inspection of heme protein structures in the protein data bank reveals four isomers of heme characterized by different relative orientations of the vinyl side chains; remarkably, all these have been reported in multiple protein structures. Density functional theory computations explain this as du...

  1. 1981 Hartwell Lake Water Quality Study.

    1982-09-01

    located approximately eight kilometers from stabions 2, 3, and 8. The highest and lowest temp- eratures were 101 and 11 farenheit (F) during the hottest...stations and months for ORP measurements are given in Figures B-21 through B-23. There was absolutely no pattern to the August values for both...all lake stations (excluding Station 9), but which was most pronounced in the cove where denisties dropped to zero , is unknown. Physical and chemical

  2. Geophysical study of the Clear Lake region, California

    Chapman, R.H.

    1975-01-01

    Results of geophysical studies in the Clear Lake region of California, north of San Francisco, have revealed a prominent, nearly circular negative gravity anomaly with an amplitude of more than 25 milligals (mgal) and an areal extent of approximately 250 square miles and, in addition, a number of smaller positive and negative anomalies. The major negative gravity anomaly is closely associated with the Clear Lake volcanic field and with an area characterized by hot springs and geothermal fields. However, the anomaly cannot be explained by mapped surface geologic features of the area. Aeromagnetic data in the Clear Lake region show no apparent correlation with the major negative gravity anomaly; the local magnetic field is affected principally by serpentine. An electrical resistivity low marks the central part of the gravity minimum, and a concentration of earthquake epicenters characterizes the Clear Lake volcanic field area. The primary cause of the major negative gravity anomaly is believed to be a hot intrusive mass, possibly a magma chamber, that may underlie the Clear Lake volcanic field and vicinity. This mass may serve as a source of heat for the geothermal phenomena in the area. Other smaller gravity anomalies in the Clear Lake region are apparently caused by near-surface geologic features, including relatively dense units of the Franciscan Formation and less dense Cenozoic sedimentary and volcanic rock units.

  3. Geophysical and hydrologic studies of lake seepage variability

    Toran, Laura; Nyquist, Jonathan E.; Rosenberry, Donald O.; Gagliano, Michael P.; Mitchell, Natasha; Mikochik, James

    2014-01-01

    Variations in lake seepage were studied along a 130 m shoreline of Mirror Lake NH. Seepage was downward from the lake to groundwater; rates measured from 28 seepage meters varied from 0 to −282 cm/d. Causes of this variation were investigated using electrical resistivity surveys and lakebed sediment characterization. Two-dimensional (2D) resistivity surveys showed a transition in lakebed sediments from outwash to till that correlated with high- and low-seepage zones, respectively. However, the 2D survey was not able to predict smaller scale variations within these facies. In the outwash, fast seepage was associated with permeability variations in a thin (2 cm) layer of sediments at the top of the lakebed. In the till, where seepage was slower than that in the outwash, a three-dimensional resistivity survey mapped a point of high seepage associated with heterogeneity (lower resistivity and likely higher permeability). Points of focused flow across the sediment–water interface are difficult to detect and can transmit a large percentage of total exchange. Using a series of electrical resistivity geophysical methods in combination with hydrologic data to locate heterogeneities that affect seepage rates can help guide seepage meter placement. Improving our understanding of the causes and types of heterogeneity in lake seepage will provide better data for lake budgets and prediction of mass transfer of solutes or contaminants between lakes and groundwater.

  4. One ring to rule them all: trafficking of heme and heme synthesis intermediates in the metazoans.

    Hamza, Iqbal; Dailey, Harry A

    2012-09-01

    The appearance of heme, an organic ring surrounding an iron atom, in evolution forever changed the efficiency with which organisms were able to generate energy, utilize gasses and catalyze numerous reactions. Because of this, heme has become a near ubiquitous compound among living organisms. In this review we have attempted to assess the current state of heme synthesis and trafficking with a goal of identifying crucial missing information, and propose hypotheses related to trafficking that may generate discussion and research. The possibilities of spatially organized supramolecular enzyme complexes and organelle structures that facilitate efficient heme synthesis and subsequent trafficking are discussed and evaluated. Recently identified players in heme transport and trafficking are reviewed and placed in an organismal context. Additionally, older, well established data are reexamined in light of more recent studies on cellular organization and data available from newer model organisms. This article is part of a Special Issue entitled: Cell Biology of Metals. Copyright © 2012 Elsevier B.V. All rights reserved.

  5. Coordinate expression of heme and globin is essential for effective erythropoiesis.

    Doty, Raymond T; Phelps, Susan R; Shadle, Christina; Sanchez-Bonilla, Marilyn; Keel, Siobán B; Abkowitz, Janis L

    2015-12-01

    Erythropoiesis requires rapid and extensive hemoglobin production. Heme activates globin transcription and translation; therefore, heme synthesis must precede globin synthesis. As free heme is a potent inducer of oxidative damage, its levels within cellular compartments require stringent regulation. Mice lacking the heme exporter FLVCR1 have a severe macrocytic anemia; however, the mechanisms that underlie erythropoiesis dysfunction in these animals are unclear. Here, we determined that erythropoiesis failure occurs in these animals at the CFU-E/proerythroblast stage, a point at which the transferrin receptor (CD71) is upregulated, iron is imported, and heme is synthesized--before ample globin is produced. From the CFU-E/proerythroblast (CD71(+) Ter119(-) cells) stage onward, erythroid progenitors exhibited excess heme content, increased cytoplasmic ROS, and increased apoptosis. Reducing heme synthesis in FLVCR1-defient animals via genetic and biochemical approaches improved the anemia, implying that heme excess causes, and is not just associated with, the erythroid marrow failure. Expression of the cell surface FLVCR1 isoform, but not the mitochondrial FLVCR1 isoform, restored normal rbc production, demonstrating that cellular heme export is essential. Together, these studies provide insight into how heme is regulated to allow effective erythropoiesis, show that erythropoiesis fails when heme is excessive, and emphasize the importance of evaluating Ter119(-) erythroid cells when studying erythroid marrow failure in murine models.

  6. Structural and Functional Models of Non-Heme Iron Enzymes : A Study of the 2-His-1-Carboxylate Facial Triad Structural Motif

    Bruijnincx, P.C.A.

    2007-01-01

    The structural and functional modeling of a specific group of non-heme iron enzymes by the synthesis of small synthetic analogues is the topic of this thesis. The group of non-heme iron enzymes with the 2-His-1-carboxylate facial triad has recently been established as a common platform for the

  7. A study of the mechanism of action of pyridoxal isonicotinoyl hydrazone at the cellular level using reticulocytes loaded with non-heme 59Fe

    Huang, A.R.; Ponka, P.; McGill Univ., Montreal, Quebec; Jewish General Hospital, Montreal, Quebec

    1983-01-01

    Pyridoxal isonicotinoyl hydrazone (PIH) has recently been identified as a new iron chelating agent with a high degree of iron mobilizing activity in vitro and in vivo which makes this compound a candidate drug in the treatment of iron overload. This study was undertaken to elucidate the mechanism of action of the iron mobilizing activity of PIH at the cellular level. An in vitro system of rabbit reticulocytes with a high level of non-heme 59 Fe was used as a model of iron overload. The effects of various biochemical and physiological manoeuvers on the mobilization of 59 Fe by PIH from the cells were studied. The fate of [ 14 C]-PIH in the in vitro system was also studied. Studies were also carried out using a crude mitochondrial fraction. (orig./AJ)

  8. ATP-binding cassette B10 regulates early steps of heme synthesis.

    Bayeva, Marina; Khechaduri, Arineh; Wu, Rongxue; Burke, Michael A; Wasserstrom, J Andrew; Singh, Neha; Liesa, Marc; Shirihai, Orian S; Langer, Nathaniel B; Paw, Barry H; Ardehali, Hossein

    2013-07-19

    Heme plays a critical role in gas exchange, mitochondrial energy production, and antioxidant defense in cardiovascular system. The mitochondrial transporter ATP-binding cassette (ABC) B10 has been suggested to export heme out of the mitochondria and is required for normal hemoglobinization of erythropoietic cells and protection against ischemia-reperfusion injury in the heart; however, its primary function has not been established. The aim of this study was to identify the function of ABCB10 in heme synthesis in cardiac cells. Knockdown of ABCB10 in cardiac myoblasts significantly reduced heme levels and the activities of heme-containing proteins, whereas supplementation with δ-aminolevulinic acid reversed these defects. Overexpression of mitochondrial δ-aminolevulinic acid synthase 2, the rate-limiting enzyme upstream of δ-aminolevulinic acid export, failed to restore heme levels in cells with ABCB10 downregulation. ABCB10 and heme levels were increased by hypoxia, and reversal of ABCB10 upregulation caused oxidative stress and cell death. Furthermore, ABCB10 knockdown in neonatal rat cardiomyocytes resulted in a significant delay of calcium removal from the cytoplasm, suggesting a relaxation defect. Finally, ABCB10 expression and heme levels were altered in failing human hearts and mice with ischemic cardiomyopathy. ABCB10 plays a critical role in heme synthesis pathway by facilitating δ-aminolevulinic acid production or export from the mitochondria. In contrast to previous reports, we show that ABCB10 is not a heme exporter and instead is required for the early mitochondrial steps of heme biosynthesis.

  9. Uranium and base metal dispersion studies in the Maquire Lake area, Saskatchewan

    Sopuck, V.J.; Lehto, D.A.W.; Alley, D.W.

    1980-03-01

    The objective of this study was to study uranium and base metal dispersion in various sample media occurring in the Maguire Lake area of Saskatchewan: bedrock, overburden, lake water, and lake sediments. Factors controlling partitioning of metals among various sample media were investigated, and lake sediment data were interpreted in terms of the factors to determine the significance of lake sediment data in indicating local mineralization. The association between organic matter contents and metal contents was found to vary between lake-center and nearshore sediments. Nickel, cobalt and zinc in lake sediments are strongly controlled by hydroxide precipitation and are less dependent on bedrock type. The concentration of Fe in center-lake sediments appears to reflect only the physicochemical parameters in the lake. Uranium and copper are strongly controlled by and preferentially concentrated in the organic matter; however, in center-lake sediments with >12 percent organic matter, U and Cu strongly reflect rock type

  10. Role of Heme and Heme-Proteins in Trypanosomatid Essential Metabolic Pathways

    Karina E. J. Tripodi

    2011-01-01

    Full Text Available Around the world, trypanosomatids are known for being etiological agents of several highly disabling and often fatal diseases like Chagas disease (Trypanosoma cruzi, leishmaniasis (Leishmania spp., and African trypanosomiasis (Trypanosoma brucei. Throughout their life cycle, they must cope with diverse environmental conditions, and the mechanisms involved in these processes are crucial for their survival. In this review, we describe the role of heme in several essential metabolic pathways of these protozoans. Notwithstanding trypanosomatids lack of the complete heme biosynthetic pathway, we focus our discussion in the metabolic role played for important heme-proteins, like cytochromes. Although several genes for different types of cytochromes, involved in mitochondrial respiration, polyunsaturated fatty acid metabolism, and sterol biosynthesis, are annotated at the Tritryp Genome Project, the encoded proteins have not yet been deeply studied. We pointed our attention into relevant aspects of these protein functions that are amenable to be considered for rational design of trypanocidal agents.

  11. The heme-heme oxygenase system: a molecular switch in wound healing.

    Wagener, F.A.D.T.G.; Beurden, H.E. van; Hoff, J.W. Von den; Adema, G.J.; Figdor, C.G.

    2003-01-01

    When cells are injured they release their contents, resulting in a local accumulation of free heme proteins and heme. Here, we investigated the involvement of heme and its degrading enzyme heme oxygenase (HO) in the inflammatory process during wound healing. We observed that heme directly

  12. Heme Oxygenase-1 Gene Therapy Provides Cardioprotection Via Control of Post-Ischemic Inflammation: An Experimental Study in a Pre-Clinical Pig Model.

    Hinkel, Rabea; Lange, Philipp; Petersen, Björn; Gottlieb, Elena; Ng, Judy King Man; Finger, Stefanie; Horstkotte, Jan; Lee, Seungmin; Thormann, Michael; Knorr, Maike; El-Aouni, Chiraz; Boekstegers, Peter; Reichart, Bruno; Wenzel, Philip; Niemann, Heiner; Kupatt, Christian

    2015-07-14

    Heme oxygenase-1 (HO-1) is an inducible stress-responsive enzyme converting heme to bilirubin, carbon monoxide, and free iron, which exerts anti-inflammatory and antiapoptotic effects. Although efficient cardioprotection after HO-1 overexpression has been reported in rodents, its role in attenuating post-ischemic inflammation is unclear. This study assessed the efficacy of recombinant adenoassociated virus (rAAV)-encoding human heme oxygenase-1 (hHO-1) in attenuating post-ischemic inflammation in a murine and a porcine ischemia/reperfusion model. Murine ischemia was induced by 45 min of left anterior descending occlusion, followed by 24 h of reperfusion and functional as well as fluorescent-activated cell sorting analysis. Porcine hearts were subjected to 60 min of ischemia and 24h of reperfusion before hemodynamic and histologic analyses were performed. Human microvascular endothelial cells transfected with hHO-1 displayed an attenuated interleukin-6 and intercellular adhesion molecule 1 expression, resulting in reduced monocytic THP-1 cell recruitment in vitro. In murine left anterior descending occlusion and reperfusion, the post-ischemic influx of CD45(+) leukocytes, Ly-6G(+) neutrophils, and Ly-6C(high) monocytes was further exacerbated in HO-1-deficient hearts and reversed by rAAV.hHO-1 treatment. Conversely, in our porcine model of ischemia, the post-ischemic influx of myeloperoxidase-positive neutrophils and CD14(+) monocytes was reduced by 49% and 87% after rAAV.hHO-1 transduction, similar to hHO-1 transgenic pigs. Functionally, rAAV.hHO-1 and hHO-1 transgenic left ventricles displayed a smaller loss of ejection fraction than control animals. Whereas HO-1 deficiency exacerbates post-ischemic cardiac inflammation in mice, hHO-1 gene therapy attenuates inflammation after ischemia and reperfusion in murine and porcine hearts. Regional hHO-1 gene therapy provides cardioprotection in a pre-clinical porcine ischemia/reperfusion model. Copyright © 2015 American

  13. Immunolocalization of heme oxygenase-1 in periodontal diseases

    G Gayathri

    2014-01-01

    Conclusion: The results of our study is an increasing evidence of involvement of antioxidant enzymes like heme oxygenase-1 in periodontal inflammation and their implication for treatment of chronic periodontitis.

  14. Heme orientational disorder in human adult hemoglobin reconstituted with a ring fluorinated heme and its functional consequences

    Nagao, Satoshi; Hirai, Yueki; Kawano, Shin; Imai, Kiyohiro; Suzuki, Akihiro; Yamamoto, Yasuhiko

    2007-01-01

    A ring fluorinated heme, 13,17-bis(2-carboxylatoethyl)-3,8-diethyl-2-fluoro-7,12, 18-trimethyl-porphyrin-atoiron(III), has been incorporated into human adult hemoglobin (Hb A). The heme orientational disorder in the individual subunits of the protein has been readily characterized using 19 F NMR and the O 2 binding properties of the protein have been evaluated through the oxygen equilibrium analysis. The equilibrated orientations of hemes in α- and β- subunits of the reconstituted protein were found to be almost completely opposite to each other, and hence were largely different from those of the native and the previously reported reconstituted proteins [T. Jue, G.N. La Mar, Heme orientational heterogeneity in deuterohemin-reconstituted horse and human hemoglobin characterized by proton nuclear magnetic resonance spectroscopy, Biochem. Biophys. Res. Commun. 119 (1984) 640-645]. Despite the large difference in the degree of the heme orientational disorder in the subunits of the proteins, the O 2 affinity and the cooperativity of the protein reconstituted with 2-MF were similar to those of the proteins reconstituted with a series of hemes chemically modified at the heme 3- and 8-positions [K. Kawabe, K. Imaizumi, Z. Yoshida, K. Imai, I. Tyuma, Studies on reconstituted myoglobins and hemoglobins II. Role of the heme side chains in the oxygenation of hemoglobin, J. Biochem. 92 (1982) 1713-1722], whose O 2 affinity and cooperativity were higher and lower, respectively, relative to those of native protein. These results indicated that the heme orientational disorder could exert little effect, if any, on the O 2 affinity properties of Hb A. This finding provides new insights into structure-function relationship of Hb A

  15. A preliminary magnetic study of Sawa lake sediments, Southern Iraq

    Ameen, Nawrass

    2016-04-01

    A preliminary magnetic study combined with chemical analyses was carried out in Sawa Lake in Al-Muthanna province, southern Iraq, about 22 km south west of Samawa city (31°18'48.80"N, 45°0'25.25"E). The lake is about 4.74 km length, 1.75 km width and 5.5 m height, it is surrounded by a salt rim which is higher than the lake water by about 2.8 m and sea water by about 18.5 m (Naqash et al., 1977 in Hassan, 2007). The lake is an elongated closed basin with no surface water available to it, it may be fed by groundwater of the Euphrates and Dammam aquifers through system of joints and cracks. This study aims to investigate the concentrations of selected heavy metals as pollutants and magnetic susceptibility (MS) and other magnetic properties of sediment samples from fifty sites collected from the bottom of the lake, the study area lies in an industrial area. The results show spatial variations of MS with mean value of about 4.58 x 10-8 m3 kg-1. Scanning electron microscopy and magnetic mineralogy parameters indicate the dominance of soft magnetic phase like magnetite and presence of hard magnetic phase like hematite. Spatial variations of MS combined with the concentrations of heavy metals suggests the efficiency of magnetic methods as effective, inexpensive and non-time consuming method to outlining the heavy metal pollution. References: Hassan W.F., 2007. The Physio-chemical characteristic of Sawa lake water in Samawa city-Iraq. Marine Mesopotamica, 22(2), 167-179.

  16. GIS-based pollution hazard mapping and assessment framework of shallow lakes: southeastern Pampean lakes (Argentina) as a case study.

    Romanelli, A; Esquius, K S; Massone, H E; Escalante, A H

    2013-08-01

    The assessment of water vulnerability and pollution hazard traditionally places particular emphasis on the study on groundwaters more than on surface waters. Consequently, a GIS-based Lake Pollution Hazard Index (LPHI) was proposed for assessing and mapping the potential pollution hazard for shallow lakes due to the interaction between the Potential Pollutant Load and the Lake Vulnerability. It includes easily measurable and commonly used parameters: land cover, terrain slope and direction, and soil media. Three shallow lake ecosystems of the southeastern Pampa Plain (Argentina) were chosen to test the usefulness and applicability of this suggested index. Moreover, anthropogenic and natural medium influence on biophysical parameters in these three ecosystems was examined. The evaluation of the LPHI map shows for La Brava and Los Padres lakes the highest pollution hazard (≈30 % with high to very high category) while Nahuel Rucá Lake seems to be the less hazardous water body (just 9.33 % with high LPHI). The increase in LPHI value is attributed to a different loading of pollutants governed by land cover category and/or the exposure to high slopes and influence of slope direction. Dissolved oxygen and biochemical oxygen demand values indicate a moderately polluted and eutrophized condition of shallow lake waters, mainly related to moderate agricultural activities and/or cattle production. Obtained information by means of LPHI calculation result useful to perform a local diagnosis of the potential pollution hazard to a freshwater ecosystem in order to implement basic guidelines to improve lake sustainability.

  17. Restoration of Eutrophic Lakes with Fluctuating Water Levels: A 20-Year Monitoring Study of Two Inter-Connected Lakes

    Meryem Beklioğlu

    2017-02-01

    Full Text Available Eutrophication continues to be the most important problem preventing a favorable environmental state and detrimentally impacting the ecosystem services of lakes. The current study describes the results of analyses of 20 year monitoring data from two interconnected Anatolian lakes, Lakes Mogan and Eymir, receiving sewage effluents and undergoing restoration. The first step of restoration in both lakes was sewage effluent diversion. Additionally, in hypertrophic Lake Eymir, biomanipulation was conducted, involving removal of benthi-planktivorous fish and prohibition of pike fishing. The monitoring period included high (H and low (L water levels (WL enabling elucidation of the effects of hydrological changes on lake restoration. In shallower Lake Mogan, macrophyte abundance increased after the sewage effluent diversion in periods with low water levels even at turbid water. In comparatively deeper Lake Eymir, the first biomanipulation led to a clear water state with abundant macrophyte coverage. However, shortly after biomanipulation, the water clarity declined, coinciding with low water level (LWL periods during which nutrient concentrations increased. A second biomanipulation was conducted, mostly during high water level (HWL period, resulting in a major decrease in nutrient concentrations and clearer water, but without an expansion of macrophytes. We conclude that repetitive fish removal may induce recovery but its success may be confounded by high availability of nutrients and adverse hydrological conditions.

  18. Freshwater lakes--a potential source for aquaculture activities--a model study on Perumal Lake, Cuddalore, Tamil Nadu.

    Usha, R; Ramalingam, K; Bharathi Rajan, U D

    2006-10-01

    The freshwater Perumal lake located at Cuddalore was assessed for its suitability and potential for aquaculture practices. Various hydrobiological parameters determined reveals that the various physicochemical characteristics are with in normal range of values. The DO level, BOD and COD values determined in the lake revealed the consequences of community activities and pollution possibilities. The primary productivity data revealed maximum productivity during March which infer that the lake is unaffected by anthropogenic disturbance and community contamination. The bacterial count remained higher during the monsoon periods, which characterize profuse rainfall and storm water discharge into the lake. The microfauna includes zooplankter such as cladocerans, copepods, rotifers and ostracods. Benthos include carps, catfishes, mullets and prawns. The above study revealed that the various parameters in the lake conform to the levels suited for freshwater fish culture and represents a resource for scientific management.

  19. Wiring of heme enzymes by methylene-blue labeled dendrimers

    Álvarez-Martos, Isabel; Shahdost-fard, Faezeh; Ferapontova, Elena

    2017-01-01

    Redox-modified branched 3D dendrimeric nanostructures may be considered as perspective wires for electrical connection between redox enzymes and electrodes. Here, we studied electron transfer (ET) reactions and bioelectrocatalysis of heme-containing horseradish peroxidase (HRP) and heme- and moli......Redox-modified branched 3D dendrimeric nanostructures may be considered as perspective wires for electrical connection between redox enzymes and electrodes. Here, we studied electron transfer (ET) reactions and bioelectrocatalysis of heme-containing horseradish peroxidase (HRP) and heme......- and molibdopterin-containing sulfite oxidase (SOx), wired to gold by the methylene blue (MB)-labeled polyamidoamine (PAMAM) dendrimers. The enzymes’ electrochemical transformation and bioelectrocatalytic function could be followed at both unlabeled and MB-labeled dendrimer-modified electrodes with the formal redox......, optimization of bioelectrocatalysis of complex intermembrane and, possibly, membrane enzymes....

  20. Heme and menaquinone induced electron transport in lactic acid bacteria

    Brooijmans, Rob; Smit, Bart; Santos, Filipe; van Riel, Jan; de Vos, Willem M; Hugenholtz, Jeroen

    2009-01-01

    Abstract Background For some lactic acid bacteria higher biomass production as a result of aerobic respiration has been reported upon supplementation with heme and menaquinone. In this report, we have studied a large number of species among lactic acid bacteria for the existence of this trait. Results Heme- (and menaquinone) stimulated aerobic growth was observed for several species and genera of lactic acid bacteria. These include Lactobacillus plantarum, Lactobacillus rhamnosus, Lactobacill...

  1. Malaria parasite-synthesized heme is essential in the mosquito and liver stages and complements host heme in the blood stages of infection.

    Viswanathan Arun Nagaraj

    Full Text Available Heme metabolism is central to malaria parasite biology. The parasite acquires heme from host hemoglobin in the intraerythrocytic stages and stores it as hemozoin to prevent free heme toxicity. The parasite can also synthesize heme de novo, and all the enzymes in the pathway are characterized. To study the role of the dual heme sources in malaria parasite growth and development, we knocked out the first enzyme, δ-aminolevulinate synthase (ALAS, and the last enzyme, ferrochelatase (FC, in the heme-biosynthetic pathway of Plasmodium berghei (Pb. The wild-type and knockout (KO parasites had similar intraerythrocytic growth patterns in mice. We carried out in vitro radiolabeling of heme in Pb-infected mouse reticulocytes and Plasmodium falciparum-infected human RBCs using [4-(14C] aminolevulinic acid (ALA. We found that the parasites incorporated both host hemoglobin-heme and parasite-synthesized heme into hemozoin and mitochondrial cytochromes. The similar fates of the two heme sources suggest that they may serve as backup mechanisms to provide heme in the intraerythrocytic stages. Nevertheless, the de novo pathway is absolutely essential for parasite development in the mosquito and liver stages. PbKO parasites formed drastically reduced oocysts and did not form sporozoites in the salivary glands. Oocyst production in PbALASKO parasites recovered when mosquitoes received an ALA supplement. PbALASKO sporozoites could infect mice only when the mice received an ALA supplement. Our results indicate the potential for new therapeutic interventions targeting the heme-biosynthetic pathway in the parasite during the mosquito and liver stages.

  2. Alteration of the Regiospecificity of Human Heme Oxygenase-1 by Unseating of the Heme but not Disruption of the Distal Hydrogen Bonding Network†

    Wang, Jinling; Evans, John P.; Ogura, Hiroshi; La Mar, Gerd N.; Ortiz de Montellano, Paul R.

    2008-01-01

    Heme oxygenase regiospecifically oxidizes heme at the α-meso position to give biliverdin IXα, CO, and iron. The heme orientation within the active site, which is thought to determine the oxidation regiospecificity, is shown here for the human enzyme (hHO1) to be largely determined by interactions between the heme carboxylic acid groups and residues Arg183 and Lys18 but not Tyr134. Mutation of either Arg183 or Lys18 individually does not significantly alter the NADPH-cytochrome P450 reductase-dependent reaction regiochemistry, but partially shifts the oxidation to the β/δ-meso positions in the reaction supported by ascorbic acid. Mutation of Glu29 to a lysine, which places a positive charge where it can interact with a heme carboxyl if the heme rotates by ~90°, causes a slight loss of regiospecificity, but combined with the R183E and K18E mutations results primarily in β/δ-meso oxidation of the heme under all conditions. NMR analysis of heme binding to the triple K18E/E29K/R183E mutant confirms rotation of the heme in the active site. Kinetic studies demonstrate that mutations of Arg183 greatly impair the rate of the P450 reductase-dependent reaction, in accord with the earlier finding that Arg183 is involved in binding of the reductase to hHO1, but have little effect on the ascorbate reaction. Mutations of Asp140 and Tyr58 that disrupt the active site hydrogen bonding network, impair catalytic rates but do not influence the oxidation regiochemistry. The results indicate both that the oxidation regiochemistry is largely controlled by ionic interactions of the heme propionic acid groups with the protein and that shifts in regiospecificity involve rotation of the heme about an axis perpendicular to the heme plane. PMID:16388581

  3. Heme synthesis in the lead-intoxicated mouse embryo

    Gerber, G B; Maes, J

    1978-02-01

    Incorporation of /sup 55/Fe and of (/sup 14/C) glycine was studied in control embryos and mothers and in those which had received lead in the diet from day 7 of pregnancy. Incorporation of Fe into heme of embryonic liver which increases markedly for controls on day 17 of pregnancy was depressed greatly and showed no such increase in lead-intoxicated embryos. These embryos were retarded in growth but had normal heme concentrations in body and liver. Incorporation of glycine into embryonic heme and proteins was not affected. Data on incorporation in the mothers are also presented. It is thought that the impaired synthesis of heme in lead-intoxicated embryos limits their body growth during the late phase of pregnancy.

  4. Resonance Raman studies of Escherichia coli cytochrome bd oxidase. Selective enhancement of the three heme chromophores of the "as-isolated" enzyme and characterization of the cyanide adduct.

    Sun, J; Osborne, J P; Kahlow, M A; Kaysser, T M; Hil, J J; Gennis, R B; Loehr, T M

    1995-09-26

    Cytochrome bd oxidase is a terminal bacterial oxidase containing three cofactors: a low-spin heme (b558), a high-spin heme (b595), and a chlorin d. The center of dioxygen reduction has been proposed to be at a dinuclear b595/d site, whereas b558 is mainly involved in transferring electrons from ubiquinone. One of the unique functional features of this enzyme is its resistance to high concentrations of cyanide (Ki in the millimolar range). With the appropriate selection of laser lines, the ligation and spin states of the b558, b595, and d hemes can be probed selectively by resonance Raman (rR) spectroscopy. Wavelengths between 400 and 500 nm predominantly excite the rR spectra of the b558 and b595 chromophores. Spectra obtained within this interval show a mixed population of spin and ligation states arising from b558 and b595, with the former more strongly enhanced at higher energy. Red excitation wavelengths (590-650 nm) generate rR spectra characteristic of chlorins, indicating the selective enhancement of the d heme. These rR results reveal that cytochrome bd oxidase "as isolated" contains the b558 heme in a six-coordinate low-spin ferric state, the b595 heme in a five-coordinate high-spin (5cHS) ferric state, and the d heme in a mixture of oxygenated (FeIIO2 FeIIIO2-; d650) and ferryl-oxo (FeIV = O; d680) states. However, the rR spectra of these two chlorin species indicate that they are both in the 5cHS state, suggesting that the d heme is lacking a strongly coordinated sixth ligand.(ABSTRACT TRUNCATED AT 250 WORDS)

  5. Distinct Prominent Roles for Enzymes of Plasmodium berghei Heme Biosynthesis in Sporozoite and Liver Stage Maturation

    Matuschewski, Kai; Haussig, Joana M.

    2016-01-01

    Malarial parasites have evolved complex regulation of heme supply and disposal to adjust to heme-rich and -deprived host environments. In addition to its own pathway for heme biosynthesis, Plasmodium likely harbors mechanisms for heme scavenging from host erythrocytes. Elaborate compartmentalization of de novo heme synthesis into three subcellular locations, including the vestigial plastid organelle, indicates critical roles in life cycle progression. In this study, we systematically profile the essentiality of heme biosynthesis by targeted gene deletion of enzymes in early steps of this pathway. We show that disruption of endogenous heme biosynthesis leads to a first detectable defect in oocyst maturation and sporogony in the Anopheles vector, whereas blood stage propagation, colonization of mosquito midguts, or initiation of oocyst development occurs indistinguishably from that of wild-type parasites. Although sporozoites are produced by parasites lacking an intact pathway for heme biosynthesis, they are absent from mosquito salivary glands, indicative of a vital role for heme biosynthesis only in sporozoite maturation. Rescue of the first defect in sporogony permitted analysis of potential roles in liver stages. We show that liver stage parasites benefit from but do not strictly depend upon their own aminolevulinic acid synthase and that they can scavenge aminolevulinic acid from the host environment. Together, our experimental genetics analysis of Plasmodium enzymes for heme biosynthesis exemplifies remarkable shifts between the use of endogenous and host resources during life cycle progression. PMID:27600503

  6. Hal Is a Bacillus anthracis Heme Acquisition Protein

    Balderas, Miriam A.; Nobles, Christopher L.; Honsa, Erin S.; Alicki, Embriette R.

    2012-01-01

    The metal iron is a limiting nutrient for bacteria during infection. Bacillus anthracis, the causative agent of anthrax and a potential weapon of bioterrorism, grows rapidly in mammalian hosts, which suggests that it efficiently attains iron during infection. Recent studies have uncovered both heme (isd) and siderophore-mediated (asb) iron transport pathways in this pathogen. Whereas deletion of the asb genes results in reduced virulence, the loss of three surface components from isd had no effect, thereby leaving open the question of what additional factors in B. anthracis are responsible for iron uptake from the most abundant iron source for mammals, heme. Here, we describe the first functional characterization of bas0520, a gene recently implicated in anthrax disease progression. bas0520 encodes a single near-iron transporter (NEAT) domain and several leucine-rich repeats. The NEAT domain binds heme, despite lacking a stabilizing tyrosine common to the NEAT superfamily of hemoproteins. The NEAT domain also binds hemoglobin and can acquire heme from hemoglobin in solution. Finally, deletion of bas0520 resulted in bacilli unable to grow efficiently on heme or hemoglobin as an iron source and yielded the most significant phenotype relative to that for other putative heme uptake systems, a result that suggests that this protein plays a prominent role in the replication of B. anthracis in hematogenous environments. Thus, we have assigned the name of Hal (heme-acquisition leucine-rich repeat protein) to BAS0520. These studies advance our understanding of heme acquisition by this dangerous pathogen and justify efforts to determine the mechanistic function of this novel protein for vaccine or inhibitor development. PMID:22865843

  7. A Dynamical Downscaling study over the Great Lakes Region Using WRF-Lake: Historical Simulation

    Xiao, C.; Lofgren, B. M.

    2014-12-01

    As the largest group of fresh water bodies on Earth, the Laurentian Great Lakes have significant influence on local and regional weather and climate through their unique physical features compared with the surrounding land. Due to the limited spatial resolution and computational efficiency of general circulation models (GCMs), the Great Lakes are geometrically ignored or idealized into several grid cells in GCMs. Thus, the nested regional climate modeling (RCM) technique, known as dynamical downscaling, serves as a feasible solution to fill the gap. The latest Weather Research and Forecasting model (WRF) is employed to dynamically downscale the historical simulation produced by the Geophysical Fluid Dynamics Laboratory-Coupled Model (GFDL-CM3) from 1970-2005. An updated lake scheme originated from the Community Land Model is implemented in the latest WRF version 3.6. It is a one-dimensional mass and energy balance scheme with 20-25 model layers, including up to 5 snow layers on the lake ice, 10 water layers, and 10 soil layers on the lake bottom. The lake scheme is used with actual lake points and lake depth. The preliminary results show that WRF-Lake model, with a fine horizontal resolution and realistic lake representation, provides significantly improved hydroclimates, in terms of lake surface temperature, annual cycle of precipitation, ice content, and lake-effect snowfall. Those improvements suggest that better resolution of the lakes and the mesoscale process of lake-atmosphere interaction are crucial to understanding the climate and climate change in the Great Lakes region.

  8. Value Assessment of Artificial Wetland Derived from Mining Subsided Lake: A Case Study of Jiuli Lake Wetland in Xuzhou

    Laijian Wang

    2017-10-01

    Full Text Available Mining subsided lakes are major obstacles for ecological restoration and resource reuse in mining regions. Transforming mining subsided lakes into artificial wetlands is an ecological restoration approach that has been attempted in China in recent years, but a value assessment of the approach still needs systematic research. This paper considers Jiuli Lake wetland, an artificial wetland derived from restoration of a mining subsided lake in plain area, as a case study. A value assessment model for the artificial wetland was established based on cost–benefit analysis by means of field monitoring, social surveys, GIS geostatistics, raster calculation methods, etc. Empirical analysis and calculations were performed on the case study region. The following conclusions were drawn: (1 after ecological restoration, ecosystem services of Jiuli Lake wetland which has become a national level wetland park yield positive values; (2 the improved environment of the Jiuli Lake wetland has a spillover effect on the price of surrounding land, resulting in land price appreciation; (3 using GIS geostatistics and raster calculation methods, the impact range, strength, and value of the spillover effect can be explicitly measured; (4 through the establishment of a value assessment model of the artificial wetland, incomes of the ecological restoration was found to be sufficient to cover the implementation costs, which provides a research foundation for economic feasibility of ecological restoration of mining subsided lakes.

  9. Isocyanides inhibit human heme oxygenases at the verdoheme stage.

    Evans, John P; Kandel, Sylvie; Ortiz de Montellano, Paul R

    2009-09-22

    Heme oxygenases (HO) catalyze the oxidative cleavage of heme to generate biliverdin, CO, and free iron. In humans, heme oxygenase-1 (hHO-1) is overexpressed in tumor tissues, where it helps to protect cancer cells from anticancer agents, while HOs in fungal pathogens, such as Candida albicans, function as the primary means of iron acquisition. Thus, HO can be considered a potential therapeutic target for certain diseases. In this study, we have examined the equilibrium binding of three isocyanides, isopropyl, n-butyl, and benzyl, to the two major human HO isoforms (hHO-1 and hHO-2), Candida albicans HO (CaHmx1), and human cytochrome P450 CYP3A4 using electronic absorption spectroscopy. Isocyanides coordinate to both ferric and ferrous HO-bound heme, with tighter binding by the more hydrophobic isocyanides and 200-300-fold tighter binding to the ferrous form. Benzyl isocyanide was the strongest ligand to ferrous heme in all the enzymes. Because the dissociation constants (KD) of the ligands for ferrous heme-hHO-1 were below the limit of accuracy for equilibrium titrations, stopped-flow kinetic experiments were used to measure the binding parameters of the isocyanides to ferrous hHO-1. Steady-state activity assays showed that benzyl isocyanide was the most potent uncompetitive inhibitor with respect to heme with a KI = 0.15 microM for hHO-1. Importantly, single turnover assays revealed that the reaction was completely stopped by coordination of the isocyanide to the verdoheme intermediate rather than to the ferric heme complex. Much tighter binding of the inhibitor to the verdoheme intermediate differentiates it from inhibition of, for example, CYP3A4 and offers a possible route to more selective inhibitor design.

  10. Isocyanides Inhibit Human Heme Oxygenases at the Verdoheme Stage†

    Evans, John P.; Kandel, Sylvie; Ortiz de Montellano, Paul R.

    2010-01-01

    Heme oxygenases (HO) catalyze the oxidative cleavage of heme to generate biliverdin, CO, and free iron. In humans, heme oxygenase-1 (hHO-1) is overexpressed in tumor tissues, where it helps to protect cancer cells from anticancer agents, while HOs in fungal pathogens, such as Candida albicans, function as the primary means of iron acquisition. Thus, HO can be considered a potential therapeutic target for certain diseases. In this study, we have examined the equilibrium binding of three isocyanides; isopropyl, n-butyl, and benzyl, to the two major human HO isoforms (hHO-1 and hHO-2), Candida albicans HO (CaHmx1), and human cytochrome P450 CYP3A4 using electronic absorption spectroscopy. Isocyanides coordinate to both ferric and ferrous HO-bound heme, with tighter binding by the more hydrophobic isocyanides, and 200-300-fold tighter binding to the ferrous form. Benzyl isocyanide was the strongest ligand to ferrous heme in all the enzymes. Because the dissociation constants (KD) of the ligands for ferrous heme-hHO-1 were below the limit of accuracy for equilibrium titrations, stopped-flow kinetic experiments were used to measure the binding parameters of the isocyanides to ferrous hHO-1. Steady-state activity assays showed that benzyl isocyanide was the most potent uncompetitive inhibitor with respect to heme with a KI = 0.15 μM for hHO-1. Importantly, single turnover assays revealed that the reaction was completely stopped by coordination of the isocyanide to the verdoheme intermediate rather than to the ferric heme complex. Much tighter binding of the inhibitor to the verdoheme intermediate differentiates it from inhibition of, for example, CYP3A4 and offers a possible route to more selective inhibitor design. PMID:19694439

  11. Heme Mobilization in Animals: A Metallolipid's Journey.

    Reddi, Amit R; Hamza, Iqbal

    2016-06-21

    Heme is universally recognized as an essential and ubiquitous prosthetic group that enables proteins to carry out a diverse array of functions. All heme-dependent processes, from protein hemylation to heme signaling, require the dynamic and rapid mobilization of heme to hemoproteins present in virtually every subcellular compartment. The cytotoxicity and hydrophobicity of heme necessitates that heme mobilization is carefully controlled at the cellular and systemic level. However, the molecules and mechanisms that mediate heme homeostasis are poorly understood. In this Account, we provide a heuristic paradigm with which to conceptualize heme trafficking and highlight the most recent developments in the mechanisms underlying heme trafficking. As an iron-containing tetrapyrrole, heme exhibits properties of both transition metals and lipids. Accordingly, we propose its transport and trafficking will reflect principles gleaned from the trafficking of both metals and lipids. Using this conceptual framework, we follow the flow of heme from the final step of heme synthesis in the mitochondria to hemoproteins present in various subcellular organelles. Further, given that many cells and animals that cannot make heme can assimilate it intact from nutritional sources, we propose that intercellular heme trafficking pathways must exist. This necessitates that heme be able to be imported and exported from cells, escorted between cells and organs, and regulated at the organismal level via a coordinated systemic process. In this Account, we highlight recently discovered heme transport and trafficking factors and provide the biochemical foundation for the cell and systems biology of heme. Altogether, we seek to reconceptualize heme from an exchange inert cofactor buried in hemoprotein active sites to an exchange labile and mobile metallonutrient.

  12. Characterization of SiaA, a streptococcal heme-binding protein associated with a heme ABC transport system.

    Sook, Brian R; Block, Darci R; Sumithran, Suganya; Montañez, Griselle E; Rodgers, Kenton R; Dawson, John H; Eichenbaum, Zehava; Dixon, Dabney W

    2008-02-26

    Many pathogenic bacteria require heme and obtain it from their environment. Heme transverses the cytoplasmic membrane via an ATP binding cassette (ABC) pathway. Although a number of heme ABC transport systems have been described in pathogenic bacteria, there is as yet little biophysical characterization of the proteins in these systems. The sia (hts) gene cluster encodes a heme ABC transporter in the Gram positive Streptococcus pyogenes. The lipoprotein-anchored heme binding protein (HBP) of this transporter is SiaA (HtsA). In the current study, resonance Raman (rR), magnetic circular dichroism (MCD), and nuclear magnetic resonance (NMR) spectroscopies were used to determine the coordination state and spin state of both the ferric and ferrous forms of this protein. Identifiers from these techniques suggest that the heme is six-coordinate and low-spin in both oxidation states of the protein, with methionine and histidine as axial ligands. SiaA has a pKa of 9.7 +/- 0.1, attributed to deprotonation of the axial histidine. Guanidinium titration studies show that the ferric state is less stable than the ferrous state, with DeltaG(H2O) values for the oxidized and reduced proteins of 7.3 +/- 0.8 and 16.0 +/- 3.6 kcal mol-1, respectively. The reductive and oxidative midpoint potentials determined via spectroelectrochemistry are 83 +/- 3 and 64 +/- 3 mV, respectively; the irreversibility of heme reduction suggests that redox cycling of the heme is coupled to a kinetically sluggish change in structure or conformation. The biophysical characterization described herein will significantly advance our understanding of structure-function relationships in HBP.

  13. Structural Characterization of Heme Environmental Mutants of CgHmuT that Shuttles Heme Molecules to Heme Transporters

    Norifumi Muraki

    2016-05-01

    Full Text Available Corynebacteria contain a heme uptake system encoded in hmuTUV genes, in which HmuT protein acts as a heme binding protein to transport heme to the cognate transporter HmuUV. The crystal structure of HmuT from Corynebacterium glutamicum (CgHmuT reveals that heme is accommodated in the central cleft with His141 and Tyr240 as the axial ligands and that Tyr240 forms a hydrogen bond with Arg242. In this work, the crystal structures of H141A, Y240A, and R242A mutants were determined to understand the role of these residues for the heme binding of CgHmuT. Overall and heme environmental structures of these mutants were similar to those of the wild type, suggesting that there is little conformational change in the heme-binding cleft during heme transport reaction with binding and the dissociation of heme. A loss of one axial ligand or the hydrogen bonding interaction with Tyr240 resulted in an increase in the redox potential of the heme for CgHmuT to be reduced by dithionite, though the wild type was not reduced under physiological conditions. These results suggest that the heme environmental structure stabilizes the ferric heme binding in CgHmuT, which will be responsible for efficient heme uptake under aerobic conditions where Corynebacteria grow.

  14. Dietary Heme Induces Gut Dysbiosis, Aggravates Colitis, and Potentiates the Development of Adenomas in Mice

    Marco Constante

    2017-09-01

    Full Text Available Dietary heme can be used by colonic bacteria equipped with heme-uptake systems as a growth factor and thereby impact on the microbial community structure. The impact of heme on the gut microbiota composition may be particularly pertinent in chronic inflammation such as in inflammatory bowel disease (IBD, where a strong association with gut dysbiosis has been consistently reported. In this study we investigated the influence of dietary heme on the gut microbiota and inferred metagenomic composition, and on chemically induced colitis and colitis-associated adenoma development in mice. Using 16S rRNA gene sequencing, we found that mice fed a diet supplemented with heme significantly altered their microbiota composition, characterized by a decrease in α-diversity, a reduction of Firmicutes and an increase of Proteobacteria, particularly Enterobacteriaceae. These changes were similar to shifts seen in dextran sodium sulfate (DSS-treated mice to induce colitis. In addition, dietary heme, but not systemically delivered heme, contributed to the exacerbation of DSS-induced colitis and facilitated adenoma formation in the azoxymethane/DSS colorectal cancer (CRC mouse model. Using inferred metagenomics, we found that the microbiota alterations elicited by dietary heme resulted in non-beneficial functional shifts, which were also characteristic of DSS-induced colitis. Furthermore, a reduction in fecal butyrate levels was found in mice fed the heme supplemented diet compared to mice fed the control diet. Iron metabolism genes known to contribute to heme release from red blood cells, heme uptake, and heme exporter proteins, were significantly enriched, indicating a shift toward favoring the growth of bacteria able to uptake heme and protect against its toxicity. In conclusion, our data suggest that luminal heme, originating from dietary components or gastrointestinal bleeding in IBD and, to lesser extent in CRC, directly contributes to microbiota dysbiosis

  15. Measuring the Quality of the Lakeside Tourist Destinations: Case Study of Lake Palić and Lake Srebrno (Serbia)

    Jelica J. MARKOVIĆ; Dragoslav J. PAVIĆ; Minucsér M. MÉSZAROS; Marko D. PETROVIĆ

    2015-01-01

    The purpose of this study is to determine the dimensions of the lakeside tourist destinations quality through the cases of Lake Palić and Lake Srebrno (Serbia), by interviewing daily visitors and tourists and to determine which dimensions of quality have a crucial impact on the overall satisfaction of daily visitors and tourists. Various models have been developed to measure quality. In this paper, the quality is measured by the model that is appropriate for lakeside tourist destinations, dev...

  16. BATHYMETRIC STUDY OF WADI EL-RAYAN LAKES, EGYPT

    Radwan Gad Elrab ABD ELLAH

    2016-12-01

    Full Text Available Bathymetry is a technique of measuring depths to determine the morphometry of water bodies. The derivation of bathymetry from the surveys is one of the basic researches of the aquatic environment, which has several practical implications to on the lake environment and it's monitoring. Wadi El-Rayan, as Ramsar site, is a very important wetland, in Egypt, as a reservoir for agricultural drainage water, fisheries and tourism. The Lakes are man-made basins in the Fayoum depression. Wadi El-Rayan Lakes are two reservoirs (upper Lake and Lower Lake, at different elevations. The Upper Lake is classified as open basin, while the Lower Lake is a closed basin, with no significant obvious water outflow. During recent decades, human impact on Wadi El-Rayan Lakes has increased due to intensification of agriculture and fish farming. Analyses of bathyemtric plans from 1996, 2010 and 2016 showed, the differences between morphometric parameters of the Upper Lake were generally small, while the Lower Lake changes are obvious at the three periods. The small fluctuate, in the features of Upper Lake is due to the water balance between the water inflow and water. The Lower Lake has faced extreme water loss through last twenty years is due to the agricultural lands and fish farms extended in the depression. The Upper Lake is rich in Lakeshores macrophyets, while decline the water plants in the Lower Lake. With low water levels, in the Lower Lake, the future continuity of the Lake system is in jeopardy

  17. Identifying Watershed Regions Sensitive to Soil Erosion and Contributing to Lake Eutrophication—A Case Study in the Taihu Lake Basin (China)

    Lin, Chen; Ma, Ronghua; He, Bin

    2015-01-01

    Taihu Lake in China is suffering from severe eutrophication partly due to non-point pollution from the watershed. There is an increasing need to identify the regions within the watershed that most contribute to lake water degradation. The selection of appropriate temporal scales and lake indicators is important to identify sensitive watershed regions. This study selected three eutrophic lake areas, including Meiliang Bay (ML), Zhushan Bay (ZS), and the Western Coastal region (WC), as well as multiple buffer zones next to the lake boundary as the study sites. Soil erosion intensity was designated as a watershed indicator, and the lake algae area was designated as a lake quality indicator. The sensitive watershed region was identified based on the relationship between these two indicators among different lake divisions for a temporal sequence from 2000 to 2012. The results show that the relationship between soil erosion modulus and lake quality varied among different lake areas. Soil erosion from the two bay areas was more closely correlated with water quality than soil erosion from the WC region. This was most apparent at distances of 5 km to 10 km from the lake, where the r2 was as high as 0.764. Results indicate that soil erosion could be used as an indicator for identifying key watershed protection areas. Different lake areas need to be considered separately due to differences in geographical features, land use, and the corresponding effects on lake water quality. PMID:26712772

  18. Identifying Watershed Regions Sensitive to Soil Erosion and Contributing to Lake Eutrophication--A Case Study in the Taihu Lake Basin (China).

    Lin, Chen; Ma, Ronghua; He, Bin

    2015-12-24

    Taihu Lake in China is suffering from severe eutrophication partly due to non-point pollution from the watershed. There is an increasing need to identify the regions within the watershed that most contribute to lake water degradation. The selection of appropriate temporal scales and lake indicators is important to identify sensitive watershed regions. This study selected three eutrophic lake areas, including Meiliang Bay (ML), Zhushan Bay (ZS), and the Western Coastal region (WC), as well as multiple buffer zones next to the lake boundary as the study sites. Soil erosion intensity was designated as a watershed indicator, and the lake algae area was designated as a lake quality indicator. The sensitive watershed region was identified based on the relationship between these two indicators among different lake divisions for a temporal sequence from 2000 to 2012. The results show that the relationship between soil erosion modulus and lake quality varied among different lake areas. Soil erosion from the two bay areas was more closely correlated with water quality than soil erosion from the WC region. This was most apparent at distances of 5 km to 10 km from the lake, where the r² was as high as 0.764. Results indicate that soil erosion could be used as an indicator for identifying key watershed protection areas. Different lake areas need to be considered separately due to differences in geographical features, land use, and the corresponding effects on lake water quality.

  19. Binding analysis of ferritin with heme using α-casein and biotinylated-hemin: detection of heme-binding capacity of Dpr derived from heme synthesis-deficient Streptococcus mutans.

    Mieno, Ayako; Yamamoto, Yuji; Yoshikawa, Yasunaga; Watanabe, Kiyotaka; Mukai, Takao; Orino, Koichi

    2013-01-01

    Bacterial and mammalian ferritins are known to bind heme. The use of α-casein and biotinylated hemin could be applicable to detection of protein-bound heme and of proteins with heme-binding capacity, respectively. Although commercial horse spleen ferritin and purified horse spleen ferritin (L:H subunit ratio=4) bound to an α-casein-coated plate, and this binding could be inhibited by hemin, recombinant iron-binding protein (rDpr), derived from heme-deficient Streptococcus mutans and expressed in Escherichia coli, did not bind to an α-casein-coated plate. Both horse spleen ferritins bound to α-casein-immobilized beads. Commercial horse spleen ferritin and rDpr showed direct binding to hemin-agarose beads. After preincubation of commercial horse spleen ferritin or rDpr with biotinylated hemin, they showed indirect binding to avidin-immobilized beads through biotinylated hemin. These results demonstrate that α-casein is useful for detection of heme-binding ferritin and that both hemin-agarose and the combination of biotinylated hemin and avidin-beads are useful for detection of the heme-binding capacity of ferritin. In addition, this study also revealed that Dpr, a decameric iron-binding protein, from heme-deficient cells binds heme.

  20. Conserved residues of the human mitochondrial holocytochrome c synthase mediate interactions with heme.

    Babbitt, Shalon E; San Francisco, Brian; Bretsnyder, Eric C; Kranz, Robert G

    2014-08-19

    C-type cytochromes are distinguished by the covalent attachment of a heme cofactor, a modification that is typically required for its subsequent folding, stability, and function. Heme attachment takes place in the mitochondrial intermembrane space and, in most eukaryotes, is mediated by holocytochrome c synthase (HCCS). HCCS is the primary component of the eukaryotic cytochrome c biogenesis pathway, known as System III. The catalytic function of HCCS depends on its ability to coordinate interactions between its substrates: heme and cytochrome c. Recent advancements in the recombinant expression and purification of HCCS have facilitated comprehensive analyses of the roles of conserved residues in HCCS, as demonstrated in this study. Previously, we proposed a four-step model describing HCCS-mediated cytochrome c assembly, identifying a conserved histidine residue (His154) as an axial ligand to the heme iron. In this study, we performed a systematic mutational analysis of 17 conserved residues in HCCS, and we provide evidence that the enzyme contains two heme-binding domains. Our data indicate that heme contacts mediated by residues within these domains modulate the dynamics of heme binding and contribute to the stability of the HCCS-heme-cytochrome c steady state ternary complex. While some residues are essential for initial heme binding (step 1), others impact the subsequent release of the holocytochrome c product (step 4). Certain HCCS mutants that were defective in heme binding were corrected for function by exogenous aminolevulinic acid (ALA, the precursor to heme). This chemical "correction" supports the proposed role of heme binding for the corresponding residues.

  1. Hydrogeological and geochemical studies in the Perch Lake basin

    Barry, P.J.

    1979-08-01

    The Perch Lake basin is a small drainage system along the Ottawa River about 200 km west of Ottawa on the Canadian Shield. Since 1975, groups of scientists from several Canadian universities and government departments have been studying the hydrological, geological and geochemical properties of the basin. The object of these studies is to develop and test simulation models used to describe the time-dependent mass flow rates of water and dissolved and suspended substances through the basin. To review progress, a symposium/workshop was held at Chalk Rier in 1978 April. This report contains 24 extended summaries of the material presented verbally at the workshop. Subject matters include atmospheric sources and sinks, mass flows through the surface and subsurface regimes in the drainage basins and interactions occurring in the lake. (author)

  2. Alteration by irradiation and storage at amount of heme iron in poultry meat; Alteracoes provocadas pela irradiacao e armazenamento nos teores de ferro heme em carne de frango

    Souza, Adriana Regia Marques de; Arthur, Valter Arthur [Centro de Energia Nuclear na Agricultura (CENA), Piracicaba, SP (Brazil). Lab. de Irradiacao de Alimentos e Radioentomologia; Canniatti-Brazaca, Solange Guidolin [Escola Superior de Agricultura Luiz de Queiroz (ESALQ/USP), Piracicaba, SP (Brazil). Dept. de Agroindustria, Alimentos e Nutricao]. E-mail: sgcbraza@esalq.usp.br

    2007-04-15

    Studies of irradiation and storage effects in chicken were carried out to discover the influence in iron heme, non-heme amount, color and total pigments. Chicken thighs and chicken breast were studied. These were irradiated to 0, 1 and 2 kGy stored by 14 days to 4 deg C in refrigerator. Determining the heme content and non-heme of meat was done using the colorimeter method and the Ferrozine reagent. The values of iron heme were influenced both by the irradiation and the storage, reducing the amount throughout the course of time. The iron non-heme was also influenced by the doses and the storage time, however the values increased throughout the course of time, because of the conversion of iron heme in non-heme. The color did not show that it was influenced by the studied doses, except for the storage, and the total number of pigments was affected by the irradiation and the time, reducing the values with the increase of storage. Irradiation was shown to be a good method to conserve iron. (author)

  3. Enhancement of nitrite on heme-induced oxidative reactions: A potential toxicological implication.

    Lu, Naihao; Chen, Wei; Zhu, Jingjie; Peng, Yi-Yuan

    2012-02-01

    Evidence to support the role of heme as major inducers of oxidative damage is increasingly present. Nitrite (NO(2)(-)) is one of the major end products of NO metabolism. Although the biological significance of heme/NO(2)(-)-mediated protein tyrosine nitration is a subject of great interest, the important roles of NO(2)(-) on heme-dependent redox reaction have been greatly underestimated. In this study, we investigated the influence of NO(2)(-) on heme -dependent oxidative reactions. It was found that NO(2)(-) had the capacity to act as a reducing agent to remove high oxidation states of heme iron. In the reduction of ferryl heme to ferric heme, NO(2)(-) was oxidized to a nitrating agent NO(2), and subsequently, tyrosine residues in bovine serum albumin (BSA) were nitrated. However, the presence of NO(2)(-) surprisingly exerted pro-oxidant effect on heme-H(2)O(2)-induced formation of BSA carbonyls at lower concentrations and enhanced the loss of HepG2 cell viability dose-dependently, which was probably due to the ability of this inorganic compound to efficiently enhance the peroxidase activity and oxidative degradation of heme. These data provide novel evidence that the dietary intake and experimental use of NO(2)(-) in vivo and in vitro would possess the pro-oxidant activity through interfering in heme-dependent oxidative reactions. Besides the classic role in protein tyrosine nitration, the deleterious effects on heme redox reactions may provide new insights into the toxicological implications of NO(2)(-) with cellular heme proteins. Copyright © 2011 Elsevier Ltd. All rights reserved.

  4. Hemoglobin and heme scavenger receptors

    Nielsen, Marianne Jensby; Møller, Holger Jon; Moestrup, Søren Kragh

    2010-01-01

    Heme, the functional group of hemoglobin, myoglobin, and other hemoproteins, is a highly toxic substance when it appears in the extracellular milieu. To circumvent potential harmful effects of heme from hemoproteins released during physiological or pathological cell damage (such as hemolysis...... and rhabdomyolysis), specific high capacity scavenging systems have evolved in the mammalian organism. Two major systems, which essentially function in a similar way by means of a circulating latent plasma carrier protein that upon ligand binding is recognized by a receptor, are represented by a) the hemoglobin...

  5. Relationship between Antimalarial Activity and Heme Alkylation for Spiro- and Dispiro-1,2,4-Trioxolane Antimalarials▿

    Creek, Darren J.; Charman, William N.; Chiu, Francis C. K.; Prankerd, Richard J.; Dong, Yuxiang; Vennerstrom, Jonathan L.; Charman, Susan A.

    2008-01-01

    The reaction of spiro- and dispiro-1,2,4-trioxolane antimalarials with heme has been investigated to provide further insight into the mechanism of action for this important class of antimalarials. A series of trioxolanes with various antimalarial potencies was found to be unreactive in the presence of Fe(III) hemin, but all were rapidly degraded by reduced Fe(II) heme. The major reaction product from the heme-mediated degradation of biologically active trioxolanes was an alkylated heme adduct resulting from addition of a radical intermediate. Under standardized reaction conditions, a correlation (R2 = 0.88) was found between the extent of heme alkylation and in vitro antimalarial activity, suggesting that heme alkylation may be related to the mechanism of action for these trioxolanes. Significantly less heme alkylation was observed for the clinically utilized artemisinin derivatives compared to the equipotent trioxolanes included in this study. PMID:18268087

  6. Modern process study on Chen Co and Ranwu Lake of Tibetan Plateau

    Ju, J.

    2013-12-01

    Lakes are important junctions of geospheres. There are many lakes distributed on the Tibetan Plateau (TP). Lake sediment is one of the important media for retrieving the past environmental changes. Because of the uniqueness of environment of the TP, sediment, water and ecological system in lakes has local characteristic inevitably. Modern process research on different lakes will benefit interpreting the proxies more accurately. The development of observation station makes the observation and sampling more convenient. Modern process of lakes can be fulfilled in two ways, spatial or seasonal variation study, with a same aim finding out the dominant factors controlling the variations. Chen Co is a closed lake locating at inland area of southern Tibet. Ranwu Lake is an open lake locating at outflow area of SE Tibet. In this study, I studied the spatial and (or) seasonal variation of lake water and sediment in the two distinct types of lakes to make clear the mechanism of modern process. Particular attention was given to the pattern and degree of influence of rivers supplied by glaciers on lakes. Preliminary conclusions are outlined as follow: (1) In the lakes with glacier melt supplying rivers, the patterns of supply of the rivers to the lake are different. In close lake Chen Co, the influence of glacier melt is mainly reflected in the south lake area. In the open lake Ranwu Lake, the influence is comprehensive and direct. This difference influencing patterns how the lake sediments reflected the glacier melt under the past environmental changes. (2) The supply of Kaluxiong Qu River, supplied mainly by glacier melt, to Chen co has North-South difference: more directly to south lake area, reflecting by lower value of conductivity and pH, finer grain size and west to east transporting trend, greater deposition rate, more allogenic fine sediments, not obvious biological and endogenic deposition there. This enlightens the site selection for lake cores and interpretation of

  7. Introduction of water into the heme distal side by Leu65 mutations of an oxygen sensor, YddV, generates verdoheme and carbon monoxide, exerting the heme oxygenase reaction.

    Stranava, Martin; Martínková, Markéta; Stiborová, Marie; Man, Petr; Kitanishi, Kenichi; Muchová, Lucie; Vítek, Libor; Martínek, Václav; Shimizu, Toru

    2014-11-01

    The globin-coupled oxygen sensor, YddV, is a heme-based oxygen sensor diguanylate cyclase. Oxygen binding to the heme Fe(II) complex in the N-terminal sensor domain of this enzyme substantially enhances its diguanylate cyclase activity which is conducted in the C-terminal functional domain. Leu65 is located on the heme distal side and is important for keeping the stability of the heme Fe(II)-O2 complex by preventing the entry of the water molecule to the heme complex. In the present study, it was found that (i) Escherichia coli-overexpressed and purified L65N mutant of the isolated heme-bound domain of YddV (YddV-heme) contained the verdoheme iron complex and other modified heme complexes as determined by optical absorption spectroscopy and mass spectrometry; (ii) CO was generated in the reconstituted system composed of heme-bound L65N and NADPH:cytochrome P450 reductase as confirmed by gas chromatography; (iii) CO generation of heme-bound L65N in the reconstituted system was inhibited by superoxide dismutase and catalase. In a concordance with the result, the reactive oxygen species increased the CO generation; (iv) the E. coli cells overexpressing the L65N protein of YddV-heme also formed significant amounts of CO compared to the cells overexpressing the wild type protein; (v) generation of verdoheme and CO was also observed for other mutants at Leu65 as well, but to a lesser extent. Since Leu65 mutations are assumed to introduce the water molecule into the heme distal side of YddV-heme, it is suggested that the water molecule would significantly contribute to facilitating heme oxygenase reactions for the Leu65 mutants. Copyright © 2014 Elsevier Inc. All rights reserved.

  8. Transmutation of a heme protein.

    Barker, P D; Ferrer, J C; Mylrajan, M; Loehr, T M; Feng, R; Konishi, Y; Funk, W D; MacGillivray, R T; Mauk, A G

    1993-01-01

    Residue Asn57 of bovine liver cytochrome b5 has been replaced with a cysteine residue, and the resulting variant has been isolated from recombinant Escherichia coli as a mixture of four major species: A, BI, BII, and C. A combination of electronic spectroscopy, 1H NMR spectroscopy, resonance Raman spectroscopy, electrospray mass spectrometry, and direct electrochemistry has been used to characterize these four major cytochrome derivatives. The red form A (E(m) = -19 mV) is found to possess a heme group bound covalently through a thioether linkage involving Cys57 and the alpha carbon of the heme 4-vinyl group. Form BI has a covalently bound heme group coupled through a thioether linkage involving the beta carbon of the heme 4-vinyl group. Form BII is similar to BI except that the sulfur involved in the thioether linkage is oxidized to a sulfoxide. The green form C (E(m) = 175 mV) possesses a noncovalently bound prosthetic group with spectroscopic properties characteristic of a chlorin. A mechanism is proposed for the generation of these derivatives, and the implications of these observations for the biosynthesis of cytochrome c and naturally occurring chlorin prosthetic groups are discussed. PMID:8341666

  9. Climate change and diverse dimensions of glacial lake outburst floods (GLOFs): Lake Palcacocha case study, Peru

    Emmer, Adam; Walker-Crawford, Noah; Carey, Mark; Huggel, Christian; Verheyen, Roda; Wallimann-Helmer, Ivo

    2017-04-01

    Post-Little Ice Age (LIA) climate change has led to worldwide glacier retreat, formation and evolution of glacial lakes, occasionally followed by glacier lake outburst floods (GLOFs). Hundreds of GLOFs are documented throughout the 20th and 21st century, of which a certain number that caused massive downstream destruction and up to thousands of lives lost. Management of GLOF hazards and risks has typically been a local concern, focusing on the implementation of specific technical and engineering measures. Recently, however, researchers have realized that the complexity of both the risks and the socio-environmental context requires a broader understanding and response beyond the more typical local perception and management. The growing cumulative greenhouse gas (GHG) emissions, for instance, increase the anthropogenic contribution to glacier retreat, lake formation and growth and eventually to GLOF. GLOF hazard and risk management is inherently linked to the global scale from this perspective. It implies that additional important dimensions enter the debate, including ethical and legal questions about the responsibility for damage and loss due to GLOFs. Here we analyze the conditions at an emblematic case in Peru's Cordillera Blanca, which has made international headlines repeatedly since it first generated one of the world's most deadly GLOFs in 1941 to its present-day growth and instability. Situated upstream from the regional center of Huaráz (population ˜120,000), Lake Palcacocha has attracted significant attention in recent years within Peru and at an international level. Perspectives on Palcacocha lack truly cross-disciplinary research, missing more comprehensive insight. This contribution is unique for its analysis of diverse dimensions, which also provide a framework for other GLOF hazard, risk, and climate-related studies. The main aim of this constribution is to understand the links between them, their drivers and inhibitors. Four dimensions were studied

  10. Visualization of the role of host heme on the virulence of the heme auxotroph Streptococcus agalactiae.

    Joubert, Laetitia; Dagieu, Jean-Baptiste; Fernandez, Annabelle; Derré-Bobillot, Aurélie; Borezée-Durant, Elise; Fleurot, Isabelle; Gruss, Alexandra; Lechardeur, Delphine

    2017-01-16

    Heme is essential for several cellular key functions but is also toxic. Whereas most bacterial pathogens utilize heme as a metabolic cofactor and iron source, the impact of host heme during bacterial infection remains elusive. The opportunist pathogen Streptococcus agalactiae does not synthesize heme but still uses it to activate a respiration metabolism. Concomitantly, heme toxicity is mainly controlled by the HrtBA efflux transporter. Here we investigate how S. agalactiae manages heme toxicity versus benefits in the living host. Using bioluminescent bacteria and heme-responsive reporters for in vivo imaging, we show that the capacity of S. agalactiae to overcome heme toxicity is required for successful infection, particularly in blood-rich organs. Host heme is simultaneously required, as visualized by a generalized infection defect of a respiration-negative mutant. In S. agalactiae, HrtBA expression responds to an intracellular heme signal via activation of the two-component system HssRS. A hssRS promoter-driven intracellular luminescent heme sensor was designed to identify host compartments that supply S. agalactiae with heme. S. agalactiae acquires heme in heart, kidneys, and liver, but not in the brain. We conclude that S. agalactiae response to heme is organ-dependent, and its efflux may be particularly relevant in late stages of infection.

  11. LIMNOLOGY, LAKE BASINS, LAKE WATERS

    Petre GÂŞTESCU

    2009-06-01

    Full Text Available Limnology is a border discipline between geography, hydrology and biology, and is also closely connected with other sciences, from it borrows research methods. Physical limnology (the geography of lakes, studies lake biotopes, and biological limnology (the biology of lakes, studies lake biocoenoses. The father of limnology is the Swiss scientist F.A. Forel, the author of a three-volume entitled Le Leman: monographie limnologique (1892-1904, which focuses on the geology physics, chemistry and biology of lakes. He was also author of the first textbook of limnology, Handbuch der Seenkunde: allgemeine Limnologie,(1901. Since both the lake biotope and its biohydrocoenosis make up a single whole, the lake and lakes, respectively, represent the most typical systems in nature. They could be called limnosystems (lacustrine ecosystems, a microcosm in itself, as the American biologist St.A. Forbes put it (1887.

  12. Lake Lysevatten - A study of liming and reacidification effects in a forest lake ecosystem in southwestern Sweden

    Andersson, B.I.; Hultberg, H.

    1997-02-01

    Long-term monitoring (1973 to 1987) of acidification and liming effects to a lake ecosystem is reported in this study. The liming intervention of Lake Lysevatten in spring 1974 resulted in neutralisation of lake water and positive alkalinity. Invasion and population expansion of new species started and proceeded for several years. Following the neutralisation Sphagnum was almost eradicated. The restocking with fish changed the predator-prey interactions, and the community composition gradually approached what would be expected to be within the normal range for an unacidified lake. Early signs of reacidification were: The appearance of filamentous algae; Decreased condition of Brown trout (Salmo trutta) caused by increased aluminium concentrations in connection with an acid event; Enhanced growth of Sphagnum surviving on profundal bottoms. Progressive reacidification to Ph 5.0 resulted in accelerated growth of Mougeotia reaching nuisance level. If implemented, liming should be prolonged by reinterventions before alkalinity and pH decrease to much. A stable circumneutral pH is a prerequisite to provide the timescale necessary for invasion and population growth of organisms with low dispersal capacity. Furthermore, the most sensitive organisms will be adversely affected already at pH-values around six. Extensive reacidification should by all means be prevented as development of a destabilized lake community could react rather unpredictably. 168 refs, 80 figs, 26 tabs

  13. Alteration by irradiation and storage at amount of heme iron in poultry meat

    Souza, A.R.M. de; Arthur, V.; Canniatti-Brazaca, S.G.

    2007-01-01

    Studies of irradiation and storage effects in chicken were carried out to discover the influence in iron heme, non-heme amount, color and total pigments. Chicken thighs and chicken breast were studied. These were irradiated to 0, 1 and 2 kGy stored by 14 days to 4 °C in refrigerator. Determining the heme content and non-heme of meat was done using the colorimeter method and the Ferrozine reagent. The values of iron heme were influenced both by the irradiation and the storage, reducing the amount throughout the course of time. The iron non-heme was also influenced by the doses and the storage time, however the values increased throughout the course of time, because of the conversion of iron heme in non-heme. The color did not show that it was influenced by the studied doses, except for the storage, and the total number of pigments was affected by the irradiation and the time, reducing the values with the increase of storage. Irradiation was shown to be a good method to conserve iron. (author) [pt

  14. Alteration by irradiation and storage at amount of heme iron in poultry meat

    Souza, Adriana Regia Marques de; Arthur, Valter Arthur; Canniatti-Brazaca, Solange Guidolin

    2007-01-01

    Studies of irradiation and storage effects in chicken were carried out to discover the influence in iron heme, non-heme amount, color and total pigments. Chicken thighs and chicken breast were studied. These were irradiated to 0, 1 and 2 kGy stored by 14 days to 4 deg C in refrigerator. Determining the heme content and non-heme of meat was done using the colorimeter method and the Ferrozine reagent. The values of iron heme were influenced both by the irradiation and the storage, reducing the amount throughout the course of time. The iron non-heme was also influenced by the doses and the storage time, however the values increased throughout the course of time, because of the conversion of iron heme in non-heme. The color did not show that it was influenced by the studied doses, except for the storage, and the total number of pigments was affected by the irradiation and the time, reducing the values with the increase of storage. Irradiation was shown to be a good method to conserve iron. (author)

  15. The effect of irradiation and thermal process on beef heme iron concentration and color properties

    Mistura, Liliana Perazzini Furtado; Colli, Celia

    2009-01-01

    The aim of this study was to evaluate the influence of irradiation and thermal process on the heme iron (heme-Fe) concentration and color properties of Brazilian cattle beef. Beef samples (patties and steaks) were irradiated at 0-10 kGy and cooked in a combination oven at 250 deg C for 9 minutes with 70% humidity. Total iron and heme iron (heme-Fe) concentrations were determined. The data were compared by multiple comparisons and fixed- effects ANOVA. Irradiation at doses higher than 5 kGy significantly altered the heme-Fe concentration. However, the sample preparation conditions interfered more in the heme-Fe content than did the irradiation. Depending on the animal species, meat heme iron levels between 35 and 52% of the total iron are used for dietetic calculations. In this study the percentage of heme-iron was, on average, 70% of the total iron showing that humidity is an important factor for its preservation. The samples were analyzed instrumentally for CIE L * , a * , and b * values. (author)

  16. IN VITRO STUDIES ON HEME OXYGENASE-1 AND P24 ANTIGEN HIV-1 LEVEL AFTERHYPERBARIC OXYGEN TREATMENTOFHIV-1 INFECTED ON PERIPHERAL BLOOD MONONUCLEAR CELLS (PBMCS).

    Budiarti, Retno; Kuntaman; Nasronudin; Suryokusumo; Khairunisa, Siti Qamariyah

    2018-01-01

    Heme oxygenase-1 (HO-1) is a protein secreted by immune cells as a part of immune response mechanism.HO-1 can be induced by variety agents that causingoxidative stress, such as exposure to 100% oxygenat2,4 ATA pressure.It plays a vital role in maintaining cellular homeostasis.This study was conducted to identify the effect of hyperbaric oxygen exposure in cultured ofPBMCthat infected by HIV-1. Primary culture of PBMCs were isolated from 16 healthy volunteers and HIV-1 infected MT4 cell line by co-culture. The PBMCs were aliquoted into two wells as control group and treatment group. The 16 samples of HIV-1 infected PBMCwere exposed to oxygen at 2,4 ATA in animal hyperbaric chamber forthree times in 30 minutes periods with 5 minutes spacing period, that called 1 session.The Treatment done on 5 sessions within 5 days. 16 samples of HIV-1 infected PMBCs that have no hyperbaric treatment became control group.The supernatant were measured the HO-1 production by ELISA andmRNA expression of HO-1 by real time PCR and the number ofantigen p24 HIV-1by ELISA. The result showed that there was no increasing of HO-1 at both mRNA level and protein level, there was a decreasing number of antigen p24 HIV-1 at the treatment group. In addition, hyperbaric exposure could not increase the expression of HO-1, more over the viral replication might be reduced by other mechanism. Hyperbaric oxygen could increases cellular adaptive response of PBMCs infected HIV-1 through increased expression of proteins that can inhibit HIV viralreplication.

  17. Lake Michigan Mass Balance Study Post Audit: Integrated, Multi-media PCB Modeling and Forecasting for Lake Trout

    The Lake Michigan (LM) Mass Balance Study was conducted to measure and model polychlorinated biphenyls (PCBs) and other anthropogenic substances to gain a better understanding of the transport, fate, and effects of these substances within the system and to aid managers in the env...

  18. Cyanide does more to inhibit heme enzymes, than merely serving as an active-site ligand

    Parashar, Abhinav [Center for Biomedical Research, VIT University, Vellore, Tamil Nadu, 632014 India (India); Venkatachalam, Avanthika [REDOx Lab, PSG Institute of Advanced Studies, Avinashi Road, Peelamedu, Coimbatore, Tamil Nadu, 641004 (India); Gideon, Daniel Andrew [Center for Biomedical Research, VIT University, Vellore, Tamil Nadu, 632014 India (India); Manoj, Kelath Murali, E-mail: satyamjayatu@yahoo.com [REDOx Lab, PSG Institute of Advanced Studies, Avinashi Road, Peelamedu, Coimbatore, Tamil Nadu, 641004 (India)

    2014-12-12

    Highlights: • Cyanide (CN) is a well-studied toxic principle, known to inhibit heme-enzymes. • Inhibition is supposed to result from CN binding at the active site as a ligand. • Diverse heme enzymes’ CN inhibition profiles challenge prevailing mechanism. • Poor binding efficiency of CN at low enzyme concentrations and ligand pressures. • CN-based diffusible radicals cause ‘non-productive electron transfers’ (inhibition). - Abstract: The toxicity of cyanide is hitherto attributed to its ability to bind to heme proteins’ active site and thereby inhibit their activity. It is shown herein that the long-held interpretation is inadequate to explain several observations in heme-enzyme reaction systems. Generation of cyanide-based diffusible radicals in heme-enzyme reaction milieu could shunt electron transfers (by non-active site processes), and thus be detrimental to the efficiency of oxidative outcomes.

  19. Preliminary isotopic study of Lake Asal system (Republic of Djibouti)

    Fontes, J.C.; Zuppi, G.M.; Florkowski, T.; Pouchan, P.

    1979-01-01

    The saline Lake Asal at 155 m below sea level in the Afar Rift (Republic of Djibouti) is fed mainly by sea water. In spite of the intense evaporation (about 3 m annually), the 18 O and deuterium enrichments of the lake water are relatively low, because of the reduced activity of water as a consequence of the high salt content. Isotopic balance of the lake, as well as lithium and sulphate balances, support the hypothesis of leakages from the lake of about 15 to 20% of the inflow. (author)

  20. Hydrological River Drought Analysis (Case Study: Lake Urmia Basin Rivers

    Mohammad Nazeri Tahrudi

    2017-02-01

    Full Text Available Introduction: Drought from the hydrological viewpoint is a continuation of the meteorological drought that cause of the lack of surface water such as rivers, lakes, reservoirs and groundwater resources. This analysis, which is generally on the surface streams, reservoirs, lakes and groundwater, takes place as hydrological drought considered and studied. So the data on the quantity of flow of the rivers in this study is of fundamental importance. This data are included, level, flow, river flow is no term (5. Overall the hydrological drought studies are focused on annual discharges, maximum annual discharge or minimum discharge period. The most importance of this analysis is periodically during the course of the analysis remains a certain threshold and subthresholdrunoff volume fraction has created. In situations where water for irrigation or water of a river without any reservoir, is not adequate, the minimum flow analysis, the most important factor to be considered (4. The aim of this study is evaluatingthe statistical distributions of drought volume rivers data from the Urmia Lake’s rivers and its return period. Materials and Methods: Urmia Lake is a biggest and saltiest continued lake in Iran. The Lake Urmia basin is one of the most important basins in Iran region which is located in the North West of Iran. With an extent of 52700 square kilometers and an area equivalent to 3.21% of the total area of the country, This basin is located between the circuit of 35 degrees 40 minutes to 38 degrees 29 minutes north latitude and the meridian of 44 degrees 13 minutes to 47 degrees 53 minutes east longitude. In this study used the daily discharge data (m3s-1 of Urmia Lake Rivers. Extraction of river drought volume The drought durations were extracted from the daily discharge of 13 studied stations. The first mean year was calculated for each 365 days using the Eq 1 (14. (1 (For i=1,2,3,…,365 That Ki is aith mean year, Yijis ith day discharge in jth

  1. Heme Oxygenase-1 and breast cancer resistance protein protect against heme-induced toxicity

    Wagener, Frank A D T G; Dankers, Anita C A; van Summeren, Frank; Scharstuhl, Alwin; van den Heuvel, Jeroen J M W; Koenderink, Jan B; Pennings, Sebastiaan W C; Russel, Frans G M; Masereeuw, R.

    2013-01-01

    Heme is the functional group of diverse hemoproteins and crucial for many cellular processes. However, heme is increasingly recognized as a culprit for a wide variety of pathologies, including sepsis, malaria, and kidney failure. Excess of free heme can be detrimental to tissues by mediating

  2. A synoptic study of phytoplankton in the deep lakes south of the Alps (lakes Garda, Iseo, Como, Lugano and Maggiore

    Delio RUGGIU

    2003-08-01

    Full Text Available This paper presents a synoptic account of the most important results emerging from studies on the phytoplankton communities in the deep southern subalpine lakes Garda, Iseo, Como, Lugano and Maggiore (DSL in the second half of the 1990s. At present, the trophogenic layers of these lakes are trophically different, ranging from the oligo-mesotrophy of lakes Maggiore and Garda to the meso-eutrophy of lakes Iseo and Lugano. The research confirmed the existence of a common pool of species developing in the DSL, as already suggested by early studies conducted on a seasonal basis from the end of the 1970s to the first half of the 1980s. However, multivariate analyses (Correspondence Analysis, CA, and a subsequent application of Non Metric Multidimensional Scaling demonstrated that the species in this common pool were developing differently or exclusively along a geographic and a trophic gradient. The major differences in the geographic distribution were found between the easternmost lakes (Garda and Iseo and those farthest to the West (Lugano and, partly, Maggiore, with intermediate characteristics in Lake Como. These differences were due mainly to changes in the dominance relationships and only secondarily to compositional changes. The detection of the ultimate causes of these differences should take into account other factors not considered in the paper (i.e. the specific analysis of the food webs, local climatic conditions, hydrology and seasonal input of nutrients. Despite the observed differences, common patterns in the sequence of seasonal assemblages in the DSL could be recognised and defined. The second gradient in the species distribution identified by CA was strongly correlated with the principal trophic descriptors (algal biomass and total phosphorus; this meant that the phytoplankton taxa could be ranked along a trophic spectrum, from oligotrophy to eutrophy. A brief examination of the main differences which have historically arisen with

  3. Neotectonic Studies of the Lake Ohrid Basin (FYROM/Albania)

    Nadine, H.; Liermann, A.; Glasmacher, U. A.; Reicherter, K. R.

    2010-12-01

    The Lake Ohrid Basin located on 693 m a.s.l. at the south-western border of Macedonia (FYROM) with Albania is a suitable location for neotectonic studies. The lake is set in an extensional basin-and-range-like situation, which is influenced by the roll-back and detachment of the subducted slab of the Northern Hellenic Trench. The seismicity record of the area lists frequent shallow earthquakes with magnitudes of up to 6.6, which classifies the region as one of the highest risk areas for Macedonia and Albania. A multidisciplinary approach was chosen to reveal the stress history of the region. Tectonic morphology, paleostress analysis, remote sensing and geophysical investigations have been taken out to trace the landscape evolution. Furthermore, apatite fission-track (A-FT) analysis and t-T-path modelling was performed to constrain the thermal history and the exhumation rates. The deformation history of the basin can be divided in three major phases. This idea is also supported by paleostress data collected around the lake: 1. NW-SE shortening from Late Cretaceous to Miocene with compression, thrusting and uplift; 2. Uplift and diminishing compression in Late Miocene causing strike-slip and normal faulting; 3. Vertical uplift and E-W extension from Pliocene to present associated with local subsidence and (half-) graben formation. The initiation of the Ohrid Basin can be dated to Late Miocene to Pliocene. The morphology of the basin itself shows features, which characterize the area as an active seismogenic landscape. The elongated NS-trending basin is limited by the steep flanks of Galicica and Mokra Mountains to the E and W, which are tectonically controlled by normal faulting. This is expressed in linear step-like fault scarps on land with heights between 2 and 35 m. The faults have lengths between 10 and 20 km and consist of several segments. Post-glacial bedrock fault scarps at Lake Ohrid are long-lived expressions of repeated surface faulting in tectonically

  4. Measuring the Quality of the Lakeside Tourist Destinations: Case Study of Lake Palić and Lake Srebrno (Serbia

    Jelica J. MARKOVIĆ

    2015-10-01

    Full Text Available The purpose of this study is to determine the dimensions of the lakeside tourist destinations quality through the cases of Lake Palić and Lake Srebrno (Serbia, by interviewing daily visitors and tourists and to determine which dimensions of quality have a crucial impact on the overall satisfaction of daily visitors and tourists. Various models have been developed to measure quality. In this paper, the quality is measured by the model that is appropriate for lakeside tourist destinations, developed by Ryan, Huimin, and Chon (2010. Five dimensions of quality were identified and named as: additional tourist infrastructure, lake water quality, natural environment, hospitality and cleanness of the place. The results showed that the measured quality model largely predicts overall satisfaction of daily visitors and tourists on the destination. The dimension lake water quality has the most effects on the overall satisfaction. Further research could use this research by adding some other quality dimensions into consideration (e.g. quality of service, situational conditions, destination management in examining the effect of destination’s quality on satisfaction of daily visitors and tourists. The research is important to managers of lakeside tourist destinations who tend to have highly satisfied guests and who work on promotion and improvement of destination quality.

  5. Heme Attenuation Ameliorates Irritant Gas Inhalation-Induced Acute Lung Injury

    Aggarwal, Saurabh; Lam, Adam; Bolisetty, Subhashini; Carlisle, Matthew A.; Traylor, Amie; Agarwal, Anupam

    2016-01-01

    Abstract Aims: Exposure to irritant gases, such as bromine (Br2), poses an environmental and occupational hazard that results in severe lung and systemic injury. However, the mechanism(s) of Br2 toxicity and the therapeutic responses required to mitigate lung damage are not known. Previously, it was demonstrated that Br2 upregulates the heme degrading enzyme, heme oxygenase-1 (HO-1). Since heme is a major inducer of HO-1, we determined whether an increase in heme and heme-dependent oxidative injury underlies the pathogenesis of Br2 toxicity. Results: C57BL/6 mice were exposed to Br2 gas (600 ppm, 30 min) and returned to room air. Thirty minutes postexposure, mice were injected intraperitoneally with a single dose of the heme scavenging protein, hemopexin (Hx) (3 μg/gm body weight), or saline. Twenty-four hours postexposure, saline-treated mice had elevated total heme in bronchoalveolar lavage fluid (BALF) and plasma and acute lung injury (ALI) culminating in 80% mortality after 10 days. Hx treatment significantly lowered heme, decreased evidence of ALI (lower protein and inflammatory cells in BALF, lower lung wet-to-dry weight ratios, and decreased airway hyperreactivity to methacholine), and reduced mortality. In addition, Br2 caused more severe ALI and mortality in mice with HO-1 gene deletion (HO-1−/−) compared to wild-type controls, while transgenic mice overexpressing the human HO-1 gene (hHO-1) showed significant protection. Innovation: This is the first study delineating the role of heme in ALI caused by Br2. Conclusion: The data suggest that attenuating heme may prove to be a useful adjuvant therapy to treat patients with ALI. Antioxid. Redox Signal. 24, 99–112. PMID:26376667

  6. Heme Attenuation Ameliorates Irritant Gas Inhalation-Induced Acute Lung Injury.

    Aggarwal, Saurabh; Lam, Adam; Bolisetty, Subhashini; Carlisle, Matthew A; Traylor, Amie; Agarwal, Anupam; Matalon, Sadis

    2016-01-10

    Exposure to irritant gases, such as bromine (Br2), poses an environmental and occupational hazard that results in severe lung and systemic injury. However, the mechanism(s) of Br2 toxicity and the therapeutic responses required to mitigate lung damage are not known. Previously, it was demonstrated that Br2 upregulates the heme degrading enzyme, heme oxygenase-1 (HO-1). Since heme is a major inducer of HO-1, we determined whether an increase in heme and heme-dependent oxidative injury underlies the pathogenesis of Br2 toxicity. C57BL/6 mice were exposed to Br2 gas (600 ppm, 30 min) and returned to room air. Thirty minutes postexposure, mice were injected intraperitoneally with a single dose of the heme scavenging protein, hemopexin (Hx) (3 μg/gm body weight), or saline. Twenty-four hours postexposure, saline-treated mice had elevated total heme in bronchoalveolar lavage fluid (BALF) and plasma and acute lung injury (ALI) culminating in 80% mortality after 10 days. Hx treatment significantly lowered heme, decreased evidence of ALI (lower protein and inflammatory cells in BALF, lower lung wet-to-dry weight ratios, and decreased airway hyperreactivity to methacholine), and reduced mortality. In addition, Br2 caused more severe ALI and mortality in mice with HO-1 gene deletion (HO-1-/-) compared to wild-type controls, while transgenic mice overexpressing the human HO-1 gene (hHO-1) showed significant protection. This is the first study delineating the role of heme in ALI caused by Br2. The data suggest that attenuating heme may prove to be a useful adjuvant therapy to treat patients with ALI.

  7. Enhanced Heme Function and Mitochondrial Respiration Promote the Progression of Lung Cancer Cells

    Alam, Md Maksudul; Shah, Ajit; Cao, Thai M.; Sullivan, Laura A.; Brekken, Rolf; Zhang, Li

    2013-01-01

    Lung cancer is the leading cause of cancer-related mortality, and about 85% of the cases are non-small-cell lung cancer (NSCLC). Importantly, recent advance in cancer research suggests that altering cancer cell bioenergetics can provide an effective way to target such advanced cancer cells that have acquired mutations in multiple cellular regulators. This study aims to identify bioenergetic alterations in lung cancer cells by directly measuring and comparing key metabolic activities in a pair of cell lines representing normal and NSCLC cells developed from the same patient. We found that the rates of oxygen consumption and heme biosynthesis were intensified in NSCLC cells. Additionally, the NSCLC cells exhibited substantially increased levels in an array of proteins promoting heme synthesis, uptake and function. These proteins include the rate-limiting heme biosynthetic enzyme ALAS, transporter proteins HRG1 and HCP1 that are involved in heme uptake, and various types of oxygen-utilizing hemoproteins such as cytoglobin and cytochromes. Several types of human tumor xenografts also displayed increased levels of such proteins. Furthermore, we found that lowering heme biosynthesis and uptake, like lowering mitochondrial respiration, effectively reduced oxygen consumption, cancer cell proliferation, migration and colony formation. In contrast, lowering heme degradation does not have an effect on lung cancer cells. These results show that increased heme flux and function are a key feature of NSCLC cells. Further, increased generation and supply of heme and oxygen-utilizing hemoproteins in cancer cells will lead to intensified oxygen consumption and cellular energy production by mitochondrial respiration, which would fuel cancer cell proliferation and progression. The results show that inhibiting heme and respiratory function can effectively arrest the progression of lung cancer cells. Hence, understanding heme function can positively impact on research in lung cancer

  8. Impacts of population growth and economic development on water quality of a lake: case study of Lake Victoria Kenya water.

    Juma, Dauglas Wafula; Wang, Hongtao; Li, Fengting

    2014-04-01

    Anthropogenic-induced water quality pollution is a major environmental problem in freshwater ecosystems today. As a result of this, eutrophication of lakes occurs. Population and economic development are key drivers of water resource pollution. To evaluate how growth in the riparian population and in the gross domestic product (GDP) with unplanned development affects the water quality of the lake, this paper evaluates Lake Victoria Kenyan waters basin. Waters quality data between 1990 and 2012 were analyzed along with reviews of published literature, papers, and reports. The nitrate-nitrogen (NO3-N), soluble phosphorus (PO4-P), chlorophyll a, and Secchi transparencies were evaluated as they are key water quality indicators. The NO3-N increased from 10 μg l(-1) in 1990 to 98 μg 1(-1) in 2008, while PO4-P increased from 4 μg l(-1) in 1990 to 57 μg l(-1) in 2008. The population and economic growth of Kenya are increasing with both having minimums in 1990 of 24.143 million people and 12.18 billion US dollars, to maximums in 2010 of 39.742 million people and 32.163 billion US dollars, respectively. A Secchi transparency is reducing with time, indicating an increasing pollution. This was confirmed by an increase in aquatic vegetation using an analysis of moderate resolution imaging spectroradiometer (MODIS) images of 2000 and 2012 of Kenyan waters. This study found that increasing population and GDP increases pollution discharge thus polluting lakes. One of major factors causing lake water pollution is the unplanned or poor waste management policy and service.

  9. Heme and menaquinone induced electron transport in lactic acid bacteria

    Brooijmans, R.J.W.; Smit, B.; Santos, dos F.; Riel, van J.; Vos, de W.M.; Hugenholtz, J.

    2009-01-01

    ABSTRACT: BACKGROUND: For some lactic acid bacteria higher biomass production as a result of aerobic respiration has been reported upon supplementation with heme and menaquinone. In this report, we have studied a large number of species among lactic acid bacteria for the existence of this trait.

  10. A Landsat study of water quality in Lake Okeechobee

    Gervin, J. C.; Marshall, M. L.

    1976-01-01

    This paper uses multiple regression techniques to investigate the relationship between Landsat radiance values and water quality measurements. For a period of over one year, the Central and Southern Florida Flood Control District sampled the water of Lake Okeechobee for chlorophyll, carotenoids, turbidity, and various nutrients at the time of Landsat overpasses. Using an overlay map of the sampling stations, Landsat radiance values were measured from computer compatible tapes using a GE image 100 and averaging over a 22-acre area at each station. These radiance values in four bands were used to form a number of functions (powers, logarithms, exponentials, and ratios), which were then compared with the ground measurements using multiple linear regression techniques. Several dates were used to provide generality and to study possible seasonal variations. Individual correlations were presented for the various water quality parameters and best fit equations were examined for chlorophyll and turbidity. The results and their relationship to past hydrological research were discussed.

  11. A role for heme in Alzheimer's disease: Heme binds amyloid β and has altered metabolism

    Atamna, Hani; Frey, William H.

    2004-01-01

    Heme is a common factor linking several metabolic perturbations in Alzheimer's disease (AD), including iron metabolism, mitochondrial complex IV, heme oxygenase, and bilirubin. Therefore, we determined whether heme metabolism was altered in temporal lobes obtained at autopsy from AD patients and age-matched nondemented subjects. AD brain demonstrated 2.5-fold more heme-b (P < 0.01) and 26% less heme-a (P = 0.16) compared with controls, resulting in a highly significant 2.9-fold decrease in he...

  12. Studies on the phytoplankton of the deep subalpine Lake Iseo

    Rosario MOSELLO

    2003-08-01

    Full Text Available This paper reports the results of investigations carried out on the chemical characteristics and phytoplankton community of Lake Iseo. Samplings were performed on a monthly basis from 1998 to 2000. At least three main algal groups dominated the community throughout the study period. The large Bacillariophyceae were dominant mainly during late winter and early spring (Aulacoseira spp., Melosira varians, Asterionella formosa, with few species able to maintain occasional positive growth also during mid summer and/or autumn (Fragilaria crotonensis and Diatoma elongatum. The thermal stability of the water column and silica depletion were the main factors responsible for the decline of the large spring diatoms. The subsequent growth of Mougeotia sp. (Conjugatophyceae was favoured by its lower sinking rate and resistance to increasing grazing pressure by the dominant copepods (Copidodiaptomus steueri and cladocerans (Daphnia hyalina × galeata. Among the cyanobacteria, the greater development of Planktothrix rubescens in the autumn months, with conditions of vertical homogenisation and decreasing Zeu/Zmix ratios, was favoured by its ability to survive at low light irradiances. The temporal replacement of these three groups constitutes the main sequence of the annual phytoplankton succession in Lake Iseo. A large development of other algal groups was recorded only in one or two of the three study years (e.g. Dinophyceae and Chlorococcales. The changes observed in the annual phytoplankton development are discussed in the light of differences in the spring fertilisation of the waters, caused by differences in the depth of the layer involved in the late winter and spring vertical mixing.

  13. Heme-coordinated histidine residues form non-specific functional "ferritin-heme" peroxidase system: Possible and partial mechanistic relevance to oxidative stress-mediated pathology in neurodegenerative diseases.

    Esmaeili, Sajjad; Kooshk, Mohammad Reza Ashrafi; Asghari, Seyyed Mohsen; Khodarahmi, Reza

    2016-10-01

    Ferritin is a giant protein composed of 24 subunits which is able to sequester up to 4500 atoms of iron. We proposed two kinds of heme binding sites in mammalian ferritins and provided direct evidence for peroxidase activity of heme-ferritin, since there is the possibility that "ferritin-heme" systems display unexpected catalytic behavior like heme-containing enzymes. In the current study, peroxidase activity of heme-bound ferritin was studied using TMB(1), l-DOPA, serotonin, and dopamine, in the presence of H2O2, as oxidant substrate. The catalytic oxidation of TMB was consistent with first-order kinetics with respect to ferritin concentration. Perturbation of the binding affinity and catalytic behavior of heme-bound His-modified ferritin were also documented. We also discuss the importance of the peroxidase-/nitrative-mediated oxidation of vital molecules as well as ferritin-induced catalase inhibition using in vitro experimental system. Uncontrollable "heme-ferritin"-based enzyme activity as well as up-regulation of heme and ferritin may inspire that some oxidative stress-mediated cytotoxic effects in AD-affected cells could be correlated to ferritin-heme interaction and/or ferritin-induced catalase inhibition and describe its contribution as an important causative pathogenesis mechanism in some neurodegenerative disorders. Copyright © 2016 Elsevier B.V. All rights reserved.

  14. Bathymetric study of the Neotectonic Naini Lake in outer Kumaun Himalaya

    Hashimi, N.H.; Pathak, M.C; Jauhari, P.; Nair, R.R.; Sharma, A.K.; Bhakuni, D.S.; Bisht, M.K.S.; Valdiya, K.S.

    The Naini Lake is a product of rotational movement on a NW-SE trending Nainital Fault, quite after the establishment of the drainage of a mature stream named Balia Nala. Detailed bathymetric study, permits division of this crescent-shaped lake...

  15. Study of the individual cytochrome b5 and cytochrome b5 reductase domains of Ncb5or reveals a unique heme pocket and a possible role of the CS domain.

    Deng, Bin; Parthasarathy, Sudharsan; Wang, WenFang; Gibney, Brian R; Battaile, Kevin P; Lovell, Scott; Benson, David R; Zhu, Hao

    2010-09-24

    NADH cytochrome b(5) oxidoreductase (Ncb5or) is found in animals and contains three domains similar to cytochrome b(5) (b(5)), CHORD-SGT1 (CS), and cytochrome b(5) reductase (b(5)R). Ncb5or has an important function, as suggested by the diabetes and lipoatrophy phenotypes in Ncb5or null mice. To elucidate the structural and functional properties of human Ncb5or, we generated its individual b(5) and b(5)R domains (Ncb5or-b(5) and Ncb5or-b(5)R, respectively) and compared them with human microsomal b(5) (Cyb5A) and b(5)R (Cyb5R3). A 1.25 Å x-ray crystal structure of Ncb5or-b(5) reveals nearly orthogonal planes of the imidazolyl rings of heme-ligating residues His(89) and His(112), consistent with a highly anisotropic low spin EPR spectrum. Ncb5or is the first member of the cytochrome b(5) family shown to have such a heme environment. Like other b(5) family members, Ncb5or-b(5) has two helix-loop-helix motifs surrounding heme. However, Ncb5or-b(5) differs from Cyb5A with respect to location of the second heme ligand (His(112)) and of polypeptide conformation in its vicinity. Electron transfer from Ncb5or-b(5)R to Ncb5or-b(5) is much less efficient than from Cyb5R3 to Cyb5A, possibly as a consequence of weaker electrostatic interactions. The CS linkage probably obviates the need for strong interactions between b(5) and b(5)R domains in Ncb5or. Studies with a construct combining the Ncb5or CS and b(5)R domains suggest that the CS domain facilitates docking of the b(5) and b(5)R domains. Trp(114) is an invariant surface residue in all known Ncb5or orthologs but appears not to contribute to electron transfer from the b(5)R domain to the b(5) domain.

  16. Antibiotic suppression of intestinal microbiota reduces heme-induced lipoperoxidation associated with colon carcinogenesis in rats.

    Martin, O C B; Lin, C; Naud, N; Tache, S; Raymond-Letron, I; Corpet, D E; Pierre, F H

    2015-01-01

    Epidemiological studies show that heme iron from red meat is associated with increased colorectal cancer risk. In carcinogen-induced-rats, a heme iron-rich diet increases the number of precancerous lesions and raises associated fecal biomarkers. Heme-induced lipoperoxidation measured by fecal thiobarbituric acid reagents (TBARs) could explain the promotion of colon carcinogenesis by heme. Using a factorial design we studied if microbiota could be involved in heme-induced carcinogenesis, by modulating peroxidation. Rats treated or not with an antibiotic cocktail were given a control or a hemoglobin-diet. Fecal bacteria were counted on agar and TBARs concentration assayed in fecal water. The suppression of microbiota by antibiotics was associated with a reduction of crypt height and proliferation and with a cecum enlargement, which are characteristics of germ-free rats. Rats given hemoglobin diets had increased fecal TBARs, which were suppressed by the antibiotic treatment. A duplicate experiment in rats given dietary hemin yielded similar results. These data show that the intestinal microbiota is involved in enhancement of lipoperoxidation by heme iron. We thus suggest that microbiota could play a role in the heme-induced promotion of colorectal carcinogenesis.

  17. Heme and HO-1 inhibition of HCV, HBV, and HIV

    Warren N Schmidt

    2012-10-01

    Full Text Available Hepatitis C virus, human immunodeficiency virus, and hepatitis B virus are chronic viral infections that cause considerable morbidity and mortality throughout the world. In the decades following the identification and sequencing of these viruses, in vitro experiments demonstrated that heme oxygenase-1, its oxidative products, and related compounds of the heme oxygenase system are virucidal for all three viruses. The purpose of this review is to critically evaluate and summarize the seminal studies that described and characterized this remarkable behavior. It will also discuss more recent work that discovered the antiviral mechanisms and target sites of these unique antiviral agents. In spite of the fact that these viruses are diverse pathogens with quite profound differences in structure and life cycle, it is significant that heme and related compounds show striking similarity for viral target sites across all three species. Collectively, these findings strongly indicate that we should move forward and develop heme and related tetrapyrroles into versatile antiviral agents that could be used therapeutically in patients with single or multiple viral infections.

  18. The nature of the exchange coupling between high-spin Fe(III) heme o3 and CuBII in Escherichia coli quinol oxidase, cytochrome bo3: MCD and EPR studies.

    Cheesman, Myles R; Oganesyan, Vasily S; Watmough, Nicholas J; Butler, Clive S; Thomson, Andrew J

    2004-04-07

    Fully oxidized cytochrome bo3 from Escherichia coli has been studied in its oxidized and several ligand-bound forms using electron paramagnetic resonance (EPR) and magnetic circular dichroism (MCD) spectroscopies. In each form, the spin-coupled high-spin Fe(III) heme o3 and CuB(II) ion at the active site give rise to similar fast-relaxing broad features in the dual-mode X-band EPR spectra. Simulations of dual-mode spectra are presented which show that this EPR can arise only from a dinuclear site in which the metal ions are weakly coupled by an anisotropic exchange interaction of J 1 cm-1. A variable-temperature and magnetic field (VTVF) MCD study is also presented for the cytochrome bo3 fluoride and azide derivatives. New methods are used to extract the contribution to the MCD of the spin-coupled active site in the presence of strong transitions from low-spin Fe(III) heme b. Analysis of the MCD data, independent of the EPR study, also shows that the spin-coupling within the active site is weak with J approximately 1 cm-1. These conclusions overturn a long-held view that such EPR signals in bovine cytochrome c oxidase arise from an S' = 2 ground state resulting from strong exchange coupling (J > 10(2) cm-1) within the active site.

  19. Ecobiological studies of the freshwater lakes at Schirmacher Oasis, Antarctica

    Verlecar, X.N.; Dhargalkar, V.K.; Matondkar, S.G.P.

    , Turbillaria, Tardigrades and Rotifers were dominant faunal groups. Bacteria and yeasts were predominant in soils and lake sediments. Detritus and associated bacteria form an important source of food for the opportunistic feeders such as metazoans. Long term...

  20. SF6 ventilation study at Agnew Lake Mines, Ontario

    1979-03-01

    In September 1978, James F. MacLaren Limited was awarded a contract by the Canada Centre for Mineral and Energy Technology (CANMET) to undertake a ventilation study at an underground uranium mine using sulphur hexafluoride (SF 6 ) as a tracer gas. The mine selected for the study was that of Agnew Lake Mines Limited in Northern Ontario. This is a relatively new mine with the combined mine/mill facilities first operational in mid-1977. Uranium is recovered from broken ore by in-situ leaching. The ventilation study was divided into two phases. A laboratory study was undertaken to develop a practical sampling technique, provide an evaluation of the logistics of long range sample transport and develop a laboratory analytical technique. Field programmes demonstrated the SF 6 tracer gas technique for mine ventilation trouble-shooting with the intent of providing information which will lead to more efficient use of existing mine ventilation capacity. This report outlines the findings of the laboratory study and the two field programmes

  1. Regulation of human heme oxygenase-1 gene expression under thermal stress.

    Okinaga, S; Takahashi, K; Takeda, K; Yoshizawa, M; Fujita, H; Sasaki, H; Shibahara, S

    1996-06-15

    Heme oxygenase-1 is an essential enzyme in heme catabolism, and its human gene promoter contains a putative heat shock element (HHO-HSE). This study was designed to analyze the regulation of human heme oxygenase-1 gene expression under thermal stress. The amounts of heme oxygenase-1 protein were not increased by heat shock (incubation at 42 degrees C) in human alveolar macrophages and in a human erythroblastic cell line, YN-1-0-A, whereas heat shock protein 70 (HSP70) was noticeably induced. However, heat shock factor does bind in vitro to HHO-HSE and the synthetic HHO-HSE by itself is sufficient to confer the increase in the transient expression of a reporter gene upon heat shock. The deletion of the sequence, located downstream from HHO-HSE, resulted in the activation of a reporter gene by heat shock. These results suggest that HHO-HSE is potentially functional but is repressed in vivo. Interestingly, heat shock abolished the remarkable increase in the levels of heme oxygenase-1 mRNA in YN-1-0-A cells treated with hemin or cadmium, in which HSP70 mRNA was noticeably induced. Furthermore, transient expression assays showed that heat shock inhibits the cadmium-mediated activation of the heme oxygenase-1 promoter, whereas the HSP70 gene promoter was activated upon heat shock. Such regulation of heme oxygenase-1 under thermal stress may be of physiologic significance in erythroid cells.

  2. Regulation of heme metabolism in normal and sideroblastic bone marrow cells in culture

    Ibraham, N.G.; Lutton, J.D.; Hoffman, R.; Levere, R.D.

    1985-01-01

    Heme metabolism was examined in developing in vitro erythroid colonies (CFUE) and in bone marrow samples taken directly from four normal donors and four patients with sideroblastic anemia. Maximum activities of delta-aminolevulinic acid synthase (ALAS), ALA dehydratase (ALAD), and 14 C-ALA incorporation into heme were achieved in normal marrow CFUE after 8 days of culture, whereas heme oxygenase progressively decreased to low levels of activity during the same period. Assays on nucleated bone marrow cells taken directly from patients revealed that ALAS activity was considerably reduced in idiopathic sideroblastic anemia (IASA) and X-linked sideroblastic anemia (X-SA) bone marrow specimens, whereas the activity increased more than twofold (normal levels) when cells were assayed from 8-day CFUE. In all cases, ALAD activity appeared to be within normal levels. Measurement of heme synthesis revealed that normal levels of 14 C-ALA incorporation into heme were achieved in IASA cells but were reduced in X-SA cells. In marked contrast to levels in normal cells, heme oxygenase was found to be significantly elevated (two- to fourfold) in bone marrow cells taken directly from patients with IASA and X-SA. Results from this study demonstrate that IASA and X-SA bone marrow cells have disturbances in ALAS and heme metabolism, and that erythropoiesis (CFUE) can be restored to normal levels when cells are cultured in methylcellulose

  3. Heavy Metal Contamination in the Surface Layer of Bottom Sediments in a Flow-Through Lake: A Case Study of Lake Symsar in Northern Poland

    Angela Kuriata-Potasznik

    2016-08-01

    Full Text Available River-lake systems most often behave as hydrographic units, which undergo complex interactions, especially in the contact zone. One such interaction pertains to the role of a river in the dispersal of trace elements carried into and out of a lake. In this study, we aimed to assess the impact of rivers on the accumulation of heavy metals in bottom sediments of natural lakes comprised in postglacial river-lake systems. The results showed that a river flowing through a lake is a key factor responsible for the input of the majority of available fraction of heavy metals (Zn, Mn, Cd and Ni into the water body and for their accumulation along the flow of river water in the lake. The origin of other accumulated elements were the linear and point sources in catchments. In turn, the Pb content was associated with the location of roads in the direct catchment, while the sediment structure (especially size of fraction and density could have affected the accumulation of Cr and Zn, which indicated correlations between these metals and fine fraction. Our results suggest that lakes act as filters and contribute to the self-purification of water that flows through them. As a result, the content of most metals in lake sediments showed a decrease by approx. 75% between the upstream (inflow and downstream (outflow sections. The increased content of two metals only, such as chromium and cadmium (higher by 2.0 and 2.5 times, respectively, after passing through the lake, was due to the correlation of the metals with fine sand. Both the content and distribution pattern of heavy metals in lake sediments are indicative of the natural response of aquatic ecosystems to environmental stressors, such as pollutant import with river water or climate change. The complex elements creating the water ecosystem of each lake can counteract stress by temporarily removing pollutants such as toxic metals form circulation and depositing them mostly around the delta.

  4. Allocation of Heme is Differentially Regulated by Ferrochelatase Isoforms in Arabidopsis Cells

    Nino Asuela Espinas

    2016-08-01

    Full Text Available Heme is involved in various biological processes as a cofactor of hemoproteins located in various organelles. In plant cells, heme is synthesized by two isoforms of plastid-localized ferrochelatase, FC1 and FC2. In this study, by characterizing Arabidopsis T-DNA insertional mutants, we showed that the allocation of heme is differentially regulated by ferrochelatase isoforms in plant cells. Analyses of weak (fc1-1 and null (fc1-2 mutants suggest that FC1-producing heme is required for initial growth of seedling development. In contrast, weak (fc2-1 and null (fc2-2 mutants of FC2 showed pale green leaves and retarded growth, indicating that FC2-producing heme is necessary for chloroplast development. During the initial growth stage, FC2 deficiency caused reduction of plastid cytochromes. In addition, although FC2 deficiency marginally affected the assembly of photosynthetic reaction center complexes, it caused relatively larger but insufficient light-harvesting antenna to reaction centers, resulting in lower efficiency of photosynthesis. In the later vegetative growth, however, fc2-2 recovered photosynthetic growth, showing that FC1-producing heme may complement the FC2 deficiency. On the other hand, reduced level of cytochromes in microsomal fraction was discovered in fc1-1, suggesting that FC1-producing heme is mainly allocated to extraplastidic organelles. Furthermore, the expression of FC1 is induced by the treatment of an elicitor flg22 while that of FC2 was reduced, and fc1-1 abolished the flg22-dependent induction of FC1 expression and peroxidase activity. Consequently, our results clarified that FC2 produces heme for the photosynthetic machinery in the chloroplast, while FC1 is the housekeeping enzyme providing heme cofactor to the entire cell. In addition, FC1 can partly complement FC2 deficiency and is also involved in defense against stressful conditions.

  5. Biogeochemistry of Lakes in Western Papua, Indonesia - First Results of a Pilot Study.

    Kallmeyer, J.; Nomosatryo, S.; Henny, C.; Kopalit, H.

    2016-12-01

    Despite years of exploration for mineral and hydrocarbon resources, the lakes of Western Papua have received very little attention from a limnogeologic perspective. In some cases not even the maximum water depth of the lakes is published. The only research carried out so far focused on the fish and invertebrate fauna of the lakes, because the macrofauna of Papuan Lakes is significantly different from other islands of western Indonesia. Most lakes harbor numerous endemic species. We carried out a first limnogeologic pilot campaign in spring 2016 to measure water column profiles and take short (max 80 cm long) sediment cores.Lake Sentani is seated in Mesozoic mafic bedrock and consists of four separate basins with maximum water depths of 30 to 40 m. Three basins are connected by shallow sills and one by a natural canal. Although all four basins share almost identical surface water chemistry and exhibit sub- to anoxic bottom waters, each basin has its distinct water column stratification and sediment geochemistry. Despite its coastal location and minimal elevation we could not identify an influx of seawater into the lake. Lake Ayamaru is located further inland on a densely forested karstified carbonate platform. The lake level has dropped significantly in recent years due to water loss into the karst, further reduction of open water surface is caused by massive growth of Pistia. Currently the lake has a maximum depth of around 2 m. Its sediment is mainly composed of carbonate minerals and methane saturated. Due to the carbonate bedrock the lake is highly alkaline (up to 20 meq/L) despite its very low salinity. The initial analyses show that these lakes offer unique biogeochemical conditions that require further in-depth studies.Our research will expand to lakes Anggi Giji and Anggi Gida, which are at almost 2000 m elevation. They have maximum depths of around 200 m and much colder surface waters (12-20°C) compared to the other two lakes that have about 30

  6. Dietary heme injures surface epithelium resulting in hyperproliferation, inhibition of apoptosis and crypt hyperplasia in rat colon

    de Vogel, Johan; van-Eck, Wytske Boersma; Sesink, Aloys L. A.; Jonker-Termont, Denise S. M. L.; Kleibeuker, Jan; van der Meer, Roelof

    Epidemiological and animal model studies suggest that a high intake of heme, present in red meat, is associated with an increased risk of colon cancer. The aim of this study was to elucidate the effects of dietary heme on colonic cell homeostasis in rats. Rats were fed a purified, humanized, control

  7. Effects of 1,2-dibromo-3-chloropropane on hepatic heme synthesis

    Moody, D.E.; Clawson, G.A.; Piper, W.N.; Smuckler, E.A.

    1984-01-01

    Previous studies showed that 1,2-dibromo-3-chloropropane (DBCP) caused a decrease in hepatic microsomal cytochrome P-450 suggesting that hepatic heme metabolism may be affected by DBCP treatment. Various parameters of hepatic heme synthesis were measured at intervals ranging from 0 to 72 hr in male Sprague-Dawley rats given a single oral dose (200 mg/kg) of DBCP. Incorporation of the radiolabeled heme precursor [delta-14C]aminolevulinic acid (14C-ALA) into liver, protein, extracted heme, and subcellular fractions of liver homogenates was significantly decreased to 75, 58, and 81% of controls, respectively, at 24 hr. At 48 and 72 hr after DBCP treatment, the accumulation of 14C-ALA label after 4 hr in liver homogenates and subcellular fractions was significantly increased in comparison to controls. These changes in 14C-ALA uptake were accompanied by decreases in total liver and microsomal heme, but not mitochondrial heme. Decreases were found in the spectral content of two heme proteins, cytochromes P-450 and b5, and the activity of another heme protein, catalase. Heme oxygenase activity increased to 130, 151, 209, and 186% of control values at 12, 24, 48, and 72 hr after DBCP, respectively. A slight, but significant, increase in ALA-synthetase to 112% of controls occurred at 24 hr, and slight, but significant, decreases in ALA-dehydratase to 90 and 80% of control occurred at 12 and 24 hr, respectively. No significant changes in uroporphyrinogen-1-synthetase or ferrochelatase at the time points tested was noted. The porphyrin content of liver was increased to 130% of control, while the serum and urine porphyrin levels were decreased to 30% of the control values at 24 hr. Liver ALA content was not significantly altered through the time period studied, but serum and urine levels were increased at 24 hr to 176 and 130% of the control values, respectively. In conclusion, the decreases in liver heme proteins following a single oral dose of DBCP are accompanied by

  8. Heme oxygenase-1: a metabolic nike.

    Wegiel, Barbara; Nemeth, Zsuzsanna; Correa-Costa, Matheus; Bulmer, Andrew C; Otterbein, Leo E

    2014-04-10

    Heme degradation, which was described more than 30 years ago, is still very actively explored with many novel discoveries on its role in various disease models every year. The heme oxygenases (HO) are metabolic enzymes that utilize NADPH and oxygen to break apart the heme moiety liberating biliverdin (BV), carbon monoxide (CO), and iron. Heme that is derived from hemoproteins can be toxic to the cells and if not removed immediately, it causes cell apoptosis and local inflammation. Elimination of heme from the milieu enables generation of three products that influences numerous metabolic changes in the cell. CO has profound effects on mitochondria and cellular respiration and other hemoproteins to which it can bind and affect their function, while BV and bilirubin (BR), the substrate and product of BV, reductase, respectively, are potent antioxidants. Sequestration of iron into ferritin and its recycling in the tissues is a part of the homeodynamic processes that control oxidation-reduction in cellular metabolism. Further, heme is an important component of a number of metabolic enzymes, and, therefore, HO-1 plays an important role in the modulation of cellular bioenergetics. In this review, we describe the cross-talk between heme oxygenase-1 (HO-1) and its products with other metabolic pathways. HO-1, which we have labeled Nike, the goddess who personified victory, dictates triumph over pathophysiologic conditions, including diabetes, ischemia, and cancer.

  9. Limnological Studies of Keenjhar Lake, District, Thatta, Sindh, Pakistan.

    K. H. Lashari, , and

    2009-12-01

    Full Text Available Limnological studies of Keenjhar Lake were carried out during January 2003 to December 2005. The present study deals with physico - chemical parameters such as, temperature, pH, alkalinity, chlorides, conductivity, total dissolve solids, turbidity, dissolve oxygen, calcium and magnesium. The maximum and minimum range of physico - chemical properties were as, temperature 18 - 33 ⁰C from station 2 in January and August respectively, pH 7.3 - 8.9 in September and June respectively, alkalinity 160 - 240 mg L-1 in July and January respectively, minimum chlorides 30 mg L-1 in September and maximum 85 mg L-1 in December, conductivity 320 S cm-1 in September and 496 S cm-1 in December, total dissolve solids were 240 mg L-1 in September and 391 mg L-1 in October, turbidity was 30 NTU in December and 78 NTU in May, dissolve oxygen was 7.0 mg L-1 in January and 9.0 mg L-1 in July, calcium 50 mg L-1 in July and September and 78 mg L-1 in October, magnesium 21 mg L-1 in August and September, 35 mg L-1 June, and it is concluded that the variation in parameters were due to rain and flow of River Indus.

  10. Radiation, ventilation and dust studies at Agnew Lake mines

    Bigu, J.; Gangal, M.; Knight, G.; Regan, R.; Stefanich, W.

    1980-08-01

    Measurements of radon gas, radon and thoron decay products, ventilation, and aerosol (<= 0.13 μm) and respirable dust (<= 10 μm) concentrations were conducted at an underground uranium mine in the Agnew Lake, Ontario, area. Radon gas measurements were carried out with a radon gas continuous monitoring system, whereas the other variables were determined by grab-sampling techniques. Studies were conducted at three mine locations: a working stope, an exhaust area near the stope and a general intake area supplying fresh air to several stopes. Radiation and dust studies were carried out for different mining operations (mainly mucking and drilling) and environmental conditions. Underground barometric pressure did not seem to affect radon gas levels. No obvious effect on radiation and dust levels was readily observed nor could be correlated with underground meteorological data within the relatively narrow range the (meteorological) variables changed. Theoretical calculations for some radiation variables were done and compared with experimental values. Within the limitations of some of the calculations, overall fair agreement between experimental and theoretical data was found

  11. Emerging Glacial Lakes in the Cordillera Blanca, Peru: A Case Study at Arteson Glacier

    Chisolm, R. E.; Mckinney, D. C.; Gomez, J.; Voss, K.

    2012-12-01

    Tropical glaciers are an essential component of the water resources systems in the mountainous regions where they are located, and a warming climate has resulted in the accelerated retreat of Andean glaciers in recent decades. The shrinkage of Andean glaciers influences the flood risk for communities living downstream as new glacial lakes have begun to form at the termini of some glaciers. As these lakes continue to grow in area and volume, they pose an increasing risk of glacial lake outburst floods (GLOFs). Ice thickness measurements have been a key missing link in studying the tropical glaciers in Peru and how climate change is likely to impact glacial melt and the growth of glacial lakes. Ground penetrating radar (GPR) has rarely been applied to glaciers in Peru to measure ice thickness, and these measurements can tell us a lot about how a warming climate will affect glacier mass balance. This study presents GPR data taken in July 2012 at the Arteson glacier in the Cordillera Blanca, Peru. A new lake has begun to form at the terminus of the Arteson glacier, and this lake has key features, including overhanging ice and loose rock likely to create landslides, that could trigger a catastrophic GLOF if the lake continues to grow. This new lake is part of a series of three lakes that have formed below the Arteson glacier. The two lower lakes, Artesonraju and Paron, are much larger so that if there were an avalanche or landslide into the new lake below Arteson glacier, the impact could potentially be more catastrophic than a GLOF from one single lake. Estimates of how the lake mass balance is likely to evolve due to the retreating glacier are key to assessing the flood risk from this dynamic three-lake system. Because the glacier mass balance and lake mass balance are closely linked, the ice thickness measurements and measurements of the bed slope of the Arteson glacier and underlying bedrock give us a clue to how the lake is likely to evolve. GPR measurements of

  12. A rapid, simple method for obtaining radiochemically pure hepatic heme

    Bonkowski, H.L.; Bement, W.J.; Erny, R.

    1978-01-01

    Radioactively-labelled heme has usually been isolated from liver to which unlabelled carrier has been added by long, laborious techniques involving organic solvent extraction followed by crystallization. A simpler, rapid method is devised for obtaining radiochemically-pure heme synthesized in vivo in rat liver from delta-amino[4- 14 C]levulinate. This method, in which the heme is extracted into ethyl acetate/glacial acetic acid and in which porphyrins are removed from the heme-containing organic phase with HCl washes, does not require addition of carrier heme. The new method gives better heme recoveries than and heme specific activities identical to, those obtained using the crystallization method. In this new method heme must be synthesized from delta-amino[4- 14 C]levulinate; it is not satisfactory to use [2- 14 C]glycine substrate because non-heme counts are isolated in the heme fraction. (Auth.)

  13. Transfection of the Human Heme Oxygenase Gene Into Rabbit Coronary Microvessel Endothelial Cells: Protective Effect Against Heme and Hemoglobin Toxicity

    Abraham, N. G.; Lavrovsky, Y.; Schwartzman, M. L.; Stoltz, R. A.; Levere, R. D.; Gerritsen, M. E.

    1995-07-01

    Heme oxygenase (HO) is a stress protein and has been suggested to participate in defense mechanisms against agents that may induce oxidative injury such as metals, endotoxin, heme/hemoglobin, and various cytokines. Overexpression of HO in cells might therefore protect against oxidative stress produced by certain of these agents, specifically heme and hemoglobin, by catalyzing their degradation to bilirubin, which itself has antioxidant properties. We report here the successful in vitro transfection of rabbit coronary microvessel endothelial cells with a functioning gene encoding the human HO enzyme. A plasmid containing the cytomegalovirus promoter and the human HO cDNA complexed to cationic liposomes (Lipofectin) was used to transfect rabbit endothelial cells. Cells transfected with human HO exhibited an ≈3.0-fold increase in enzyme activity and expressed a severalfold induction of human HO mRNA as compared with endogenous rabbit HO mRNA. Transfected and nontransfected cells expressed factor VIII antigen and exhibited similar acetylated low-density lipoprotein uptake (two important features that characterize endothelial cells) with >85% of cells staining positive for each marker. Moreover, cells transfected with the human HO gene acquired substantial resistance to toxicity produced by exposure to recombinant hemoglobin and heme as compared with nontransfected cells. The protective effect of HO overexpression against heme/hemoglobin toxicity in endothelial cells shown in these studies provides direct evidence that the inductive response of human HO to such injurious stimuli represents an important tissue adaptive mechanism for moderating the severity of cell damage produced by these blood components.

  14. Cordova Lake dam hydroelectric generating station case study

    Kerr, D.; Huxley, J.

    1993-01-01

    The Ontario Ministry of Natural Resources released a Crown owned site to the private water power industry as part of the small hydro site release program initiated by the Ontario Government in the mid 1980's. The Cordova Lake Dam Hydroelectric Generating Station, built on this site, has been in operation since the first week of October, 1992. Since that time, the plant has been operating with less than 1 % down time and has generated over 2,400 MWh of electricity. Algonquin Power Systems is responsible for the management and operations of the plant which includes full time monitoring from the company's Mississauga office and a part time employee at Cordova Lake. Cordova Lake Dam is located on the Crowe River at the outlet of Cordova Lake, approximately 125 kilometers east of Toronto, Ontario. The total cost of the Cordova Lake Dam project was $1.6 million. Algonquin Power contributed 20% equity to the project. Algonquin Power was also responsible for all engineering and geotechnical work and for completing the construction and equipment contracts. 1 tab., 2 figs

  15. Exploratory studies into seasonal flow forecasting potential for large lakes

    Sene, Kevin; Tych, Wlodek; Beven, Keith

    2018-01-01

    In seasonal flow forecasting applications, one factor which can help predictability is a significant hydrological response time between rainfall and flows. On account of storage influences, large lakes therefore provide a useful test case although, due to the spatial scales involved, there are a number of modelling challenges related to data availability and understanding the individual components in the water balance. Here some possible model structures are investigated using a range of stochastic regression and transfer function techniques with additional insights gained from simple analytical approximations. The methods were evaluated using records for two of the largest lakes in the world - Lake Malawi and Lake Victoria - with forecast skill demonstrated several months ahead using water balance models formulated in terms of net inflows. In both cases slight improvements were obtained for lead times up to 4-5 months from including climate indices in the data assimilation component. The paper concludes with a discussion of the relevance of the results to operational flow forecasting systems for other large lakes.

  16. Insights on Heme Synthesis in the Malaria Parasite.

    Nagaraj, Viswanathan A; Padmanaban, Govindarajan

    2017-08-01

    The malaria parasite has a functional heme-biosynthetic pathway, although it can access host hemoglobin-heme. The heme pathway is dispensable for blood stages, but essential in the mosquito stages which do not acquire hemoglobin-heme. We propose that the blood stage parasites maintain a dynamic heme pool through multiple back-up mechanisms. Copyright © 2017 Elsevier Ltd. All rights reserved.

  17. Magnetic and gravity studies of Mono Lake, east-central, California

    Athens, Noah D.; Ponce, David A.; Jayko, Angela S.; Miller, Matt; McEvoy, Bobby; Marcaida, Mae; Mangan, Margaret T.; Wilkinson, Stuart K.; McClain, James S.; Chuchel, Bruce A.; Denton, Kevin M.

    2014-01-01

    From August 26 to September 5, 2011, the U.S. Geological Survey (USGS) collected more than 600 line-kilometers of shipborne magnetic data on Mono Lake, 20 line-kilometers of ground magnetic data on Paoha Island, 50 gravity stations on Paoha and Negit Islands, and 28 rock samples on Paoha and Negit Islands, in east-central California. Magnetic and gravity investigations were undertaken in Mono Lake to study regional crustal structures and to aid in understanding the geologic framework, in particular regarding potential geothermal resources and volcanic hazards throughout Mono Basin. Furthermore, shipborne magnetic data illuminate local structures in the upper crust beneath Mono Lake where geologic exposure is absent. Magnetic and gravity methods, which sense contrasting physical properties of the subsurface, are ideal for studying Mono Lake. Exposed rock units surrounding Mono Lake consist mainly of Quaternary alluvium, lacustrine sediment, aeolian deposits, basalt, and Paleozoic granitic and metasedimentary rocks (Bailey, 1989). At Black Point, on the northwest shore of Mono Lake, there is a mafic cinder cone that was produced by a subaqueous eruption around 13.3 ka. Within Mono Lake there are several small dacite cinder cones and flows, forming Negit Island and part of Paoha Island, which also host deposits of Quaternary lacustrine sediments. The typical density and magnetic properties of young volcanic rocks contrast with those of the lacustrine sediment, enabling us to map their subsurface extent.

  18. Concentration dynamics in lakes and reservoirs, studies using radioactive tracers

    Gilath, C.

    1979-01-01

    The concentration dynamics in lakes and reservoirs through which water flows can be investigated by injecting a pulse of radioactive tracer and measuring the response at the outlet or any other point of interest inside the lake. The methodology developed for this Kind of investigation is presented. It was found that concentration dynamics in shallow reservoirs can be described by a model consisting of a time delay in series with one or two time constants. Procedures for the determination of the volumes of these regions are presented for reservoirs considered as either constant or variable parameter systems. The flow pattern in the reservoirs was investigated by measuring the response of the concentration through the lake and was analyzed in relation to the prevailing wind conditions. Wind induced currents have a dominant influence on the flow pattern. (Author) [pt

  19. Water pollution control technology and strategy for river-lake systems: a case study in Gehu Lake and Taige Canal.

    Zhang, Yimin; Zhang, Yongchun; Gao, Yuexiang; Zhang, Houhu; Cao, Jianying; Cai, Jinbang; Kong, Xiangji

    2011-07-01

    The Taoge water system is located in the upstream of Taihu Lake basin and is characterized by its multi-connected rivers and lakes. In this paper, current analyses of hydrology, hydrodynamics and water pollution of Gehu Lake and Taige Canal are presented. Several technologies are proposed for pollution prevention and control, and water environmental protection in the Taihu Lake basin. These included water pollution control integration technology for the water systems of Gehu Lake, Taige Canal and Caoqiao River. Additionally, river-lake water quality and quantity regulation technology, ecological restoration technology for polluted and degraded water bodies, and water environmental integration management and optimization strategies were also examined. The main objectives of these strategies are to: (a) improve environmental quality of relative water bodies, prevent pollutants from entering Gehu Lake and Taige Canal, and ensure that the clean water after the pre-treatment through Gehu Lake is not polluted before entering the Taihu Lake through Taige Canal; (b) stably and efficiently intercept and decrease the pollution load entering the lake through enhancing the river outlet ecological system structure function and water self-purifying capacity, and (c) designate Gehu Lake as a regulation system for water quality and water quantity in the Taoge water system and thus guarantee the improvement of the water quality of the inflow into Taihu Lake.

  20. Mechanism governing heme synthesis reveals a GATA factor/heme circuit that controls differentiation.

    Tanimura, Nobuyuki; Miller, Eli; Igarashi, Kazuhiko; Yang, David; Burstyn, Judith N; Dewey, Colin N; Bresnick, Emery H

    2016-02-01

    Metal ion-containing macromolecules have fundamental roles in essentially all biological processes throughout the evolutionary tree. For example, iron-containing heme is a cofactor in enzyme catalysis and electron transfer and an essential hemoglobin constituent. To meet the intense demand for hemoglobin assembly in red blood cells, the cell type-specific factor GATA-1 activates transcription of Alas2, encoding the rate-limiting enzyme in heme biosynthesis, 5-aminolevulinic acid synthase-2 (ALAS-2). Using genetic editing to unravel mechanisms governing heme biosynthesis, we discovered a GATA factor- and heme-dependent circuit that establishes the erythroid cell transcriptome. CRISPR/Cas9-mediated ablation of two Alas2 intronic cis elements strongly reduces GATA-1-induced Alas2 transcription, heme biosynthesis, and surprisingly, GATA-1 regulation of other vital constituents of the erythroid cell transcriptome. Bypassing ALAS-2 function in Alas2 cis element-mutant cells by providing its catalytic product 5-aminolevulinic acid rescues heme biosynthesis and the GATA-1-dependent genetic network. Heme amplifies GATA-1 function by downregulating the heme-sensing transcriptional repressor Bach1 and via a Bach1-insensitive mechanism. Through this dual mechanism, heme and a master regulator collaborate to orchestrate a cell type-specific transcriptional program that promotes cellular differentiation. © 2015 The Authors.

  1. 2010 Great Lakes Human Health Fish Tissue Study Fish Tissue Data Dictionary

    The Office of Science and Technology (OST) is providing the fish tissue results from the 2010 Great Lakes Human Health Fish Tissue Study (GLHHFTS). This document includes the “data dictionary” for Mercury, PFC, PBDE and PCBs.

  2. Spatial variation in lake benthic macroinvertebrate ecological assessment: a synthesis of European case studies

    Sandin, Leif Leonard; Solimini, Angelo G.

    2012-01-01

    macroinvertebrate community composition and natural and human induced environmental variables (eutrophication, catchment land-use, and hydromorphological pressures) were studied. This was done in different lake habitats (the profundal, sublittoral, and littoral) in five regions of Europe (Alpine, Northern, Central...... local invertebrate assemblages. In this issue we provide a contribution towards the understanding of basic sources of spatial variation of invertebrate assemblages in different European lake habitat types and their relationship with major human pressures. All papers have an obvious applied objective...... and our aim is to provide useful information for designing monitoring programs and invertebrate based ecological classification tools with the ultimate aim to improve a sound management of European lake ecosystems....

  3. Sinkhole risk assessment by ERT: The case study of Sirino Lake (Basilicata, Italy)

    Giampaolo, V.; Capozzoli, L.; Grimaldi, S.; Rizzo, E.

    2016-01-01

    The presence of natural or artificial lakes and reservoirs that can drain because of natural phenomena can generate catastrophic events affecting urban and agricultural areas next to the source area. Therefore, geophysical prospecting techniques have been applied in the study of Sirino Lake, which, during the last century, was affected by the sudden opening of small sinkholes, resulting in the almost total draining of the lake and in the sudden increase of water flow rates of distal springs. Two electrical resistivity tomographies (ERTs) were carried out across the lake, using electrode arrays located on land and across the water body. Self-potential (SP) data were acquired around the lake shore and the surrounding area. The geophysical prospecting contributed significant data toward explaining the unique hydrogeological characteristics of the lake. Integration of geophysical, geological, hydrogeological, and geomorphological data allowed us to estimate the thickness of the lacustrine deposits beneath the lake, to describe the main patterns of the subsurface fluid flows in the area, and to identify possible water escape routes causing the piping phenomena.

  4. Laboratory studies of dissolved radiolabelled microcystin-LR in lake water

    Hyenstrand, Per; Rohrlack, Thomas; Beattie, Kenneth A

    2003-01-01

    The fate of dissolved microcystin-LR was studied in laboratory experiments using surface water taken from a eutrophic lake. Based on initial range finding, a concentration of 50 microg l(-1) dissolved 14C-microcystin-LR was selected for subsequent time-course experiments. The first was performed ...... fractions. The study demonstrated that biodegradation of dissolved microcystin-LR occurred in water collected at a lake surface with carbon dioxide as a major end-product....

  5. Comparative studies of the nitrogen metabolism of phytoplankton and periphyton in oligotrophic lakes

    Axler, R.P.; Goldman, C.R.; Reuter, J.E.; Loeb, S.L.; Priscu, J.C.; Carlton, R.G.

    1983-01-01

    This report presents the preliminary data of limnological research at the meso-oligotrophic Castle Lake, CA and at the ultratrophic Lake Tahoe, CA-NEV, USA, during 1980 to 1981. The areas of study were effects of nutrients enrichment and deficiency on primary producers; nitrogen cycling and nitrogen metabolism of benthic and planktonic algae and whole-epilimnion enrichment with ammonium nitrate. Tracer techniques using 14 C- and 15 N-labelled compounds were employed in the study

  6. Utilization of GIS modeling in geoenvironmental studies of Qaroun Lake, El Fayoum Depression, Egypt

    Attia, Abdelaal H.; El-Sayed, Salah Abdelwahab; El-Sabagh, Moustafa E.

    2018-02-01

    Qaroun Lake, the study area, is a natural protectorate located at the northern part of El Fayoum Depression, Egypt. An integrated approach including hydrochemistry, mineralogy of sediments and GIS analysis and modeling was conducted in order to determine the different geoenvironmental parameters affecting the lake environmental system. Forty two environmental water and sediment samples were collected from the lake and relevant drains in 2013. The water samples were analyzed for major ions and trace elements and the sediment ones were analyzed for clay and non-clay minerals. This study showed that the saline water of the lake (31490 Mg2+ > Ca2+ > K+ - Cl- > SO42- > HCO3- > CO32-. The water salt assemblages were KCl - NaCl - Na2SO4 - MgSO4 - CaSO4 - Ca(HCO3)2 reflecting a mixed water type. The contents of NaCl, Na2SO4 and MgSO4 salts were found to be fully controlled with the lake depths. The hydrogeochemical investigations revealed that the evaporation concentration is the primary process of the lake water evolution. The presence of trace elements in the lake water is essentially of allochtonous origin. The GIS-based maps indicated that the concentrations of Zn, Co, Mo, Pb, F and Cd elements in water had increased in the eastern part of the lake; meanwhile, the contents of NO3- ions had increased in the southwestern part indicating that these parts were the most vulnerable to the potential pollution with such elements. The XRD analysis revealed the existence of different mineral assemblages (quartz, kaolinite, goethite, calcite, halite, hematite, feldspar, gypsum, dolomite and saponite) in bottom sediments. The mineral concentrations varied greatly from place to another place along the lake and their distributions were asymmetric. The dominant minerals were the quartz and calcite. The mineralogical compositions of sediments were highly affected by the natural and man-mad activities. The most effective processes were the type of the water and solid materials coming

  7. Qualitative Study Of Anopheles Species In Konduga Lake Area Of ...

    The investigation on Anopheles species in Konduga lake area, Borno State of Nigeria, was carried out to identify various Anopheles species prevalent in the area and to determine their relative population densities. Six Anopheles species were recorded, namely, A. gambiae, A. funestus, A. ziemanni, A. squamosus, ...

  8. Mississippi River Headwaters Lakes in Minnesota. Feasibility Study. Appendices.

    1982-09-01

    organisms by blanketing stream or lake bottoms, spawning beds, or other desirable bottom area. Suspended solids may kill fish and shellfish by causing...Tree S~rv Long-billed M~arsh Wren 0Ctlipping S;-arrcd Short-billed Marsh Wren N Clay-crod )rm: Mockingbird L. Field Sparrow Gray Catbird VH;;rris

  9. Challenging Density Functional Theory Calculations with Hemes and Porphyrins

    de Visser, Sam P.; Stillman, Martin J.

    2016-01-01

    In this paper we review recent advances in computational chemistry and specifically focus on the chemical description of heme proteins and synthetic porphyrins that act as both mimics of natural processes and technological uses. These are challenging biochemical systems involved in electron transfer as well as biocatalysis processes. In recent years computational tools have improved considerably and now can reproduce experimental spectroscopic and reactivity studies within a reasonable error margin (several kcal·mol−1). This paper gives recent examples from our groups, where we investigated heme and synthetic metal-porphyrin systems. The four case studies highlight how computational modelling can correctly reproduce experimental product distributions, predicted reactivity trends and guide interpretation of electronic structures of complex systems. The case studies focus on the calculations of a variety of spectroscopic features of porphyrins and show how computational modelling gives important insight that explains the experimental spectra and can lead to the design of porphyrins with tuned properties. PMID:27070578

  10. Challenging Density Functional Theory Calculations with Hemes and Porphyrins

    Sam P. de Visser

    2016-04-01

    Full Text Available In this paper we review recent advances in computational chemistry and specifically focus on the chemical description of heme proteins and synthetic porphyrins that act as both mimics of natural processes and technological uses. These are challenging biochemical systems involved in electron transfer as well as biocatalysis processes. In recent years computational tools have improved considerably and now can reproduce experimental spectroscopic and reactivity studies within a reasonable error margin (several kcal·mol−1. This paper gives recent examples from our groups, where we investigated heme and synthetic metal-porphyrin systems. The four case studies highlight how computational modelling can correctly reproduce experimental product distributions, predicted reactivity trends and guide interpretation of electronic structures of complex systems. The case studies focus on the calculations of a variety of spectroscopic features of porphyrins and show how computational modelling gives important insight that explains the experimental spectra and can lead to the design of porphyrins with tuned properties.

  11. Organic sedimentation in modern lacustrine systems: A case study from Lake Malawi, East Africa

    Ellis, Geoffrey S.; Barry J. Katz,; Christopher A. Scholz,; Peter K. Swart,

    2015-01-01

    This study examines the relationship between depositional environment and sedimentary organic geochemistry in Lake Malawi, East Africa, and evaluates the relative significance of the various processes that control sedimentary organic matter (OM) in lacustrine systems. Total organic carbon (TOC) concentrations in recent sediments from Lake Malawi range from 0.01 to 8.80 wt% and average 2.83 wt% for surface sediments and 2.35 wt% for shallow core sediments. Hydrogen index (HI) values as determined by Rock-Eval pyrolysis range from 0 to 756 mg HC g−1 TOC and average 205 mg HC g−1 TOC for surface sediments and 228 mg HC g−1 TOC for shallow core samples. On average, variations in primary productivity throughout the lake may account for ~33% of the TOC content in Lake Malawi sediments (as much as 1 wt% TOC), and have little or no impact on sedimentary HI values. Similarly, ~33% to 66% of the variation in TOC content in Lake Malawi sediments appears to be controlled by anoxic preservation of OM (~1–2 wt% TOC), although some component of the water depth–TOC relationship may be due to physical sediment transport processes. Furthermore, anoxic preservation has a minimal effect on HI values in Lake Malawi sediments. Dilution of OM by inorganic sediment may account for ~16% of variability in TOC content in Lake Malawi sediments (~0.5 wt% TOC). The effect of inputs of terrestrial sediment on the organic character of surface sediments in these lakes is highly variable, and appears to be more closely related to the local depositional environment than the regional flux of terrestrial OM. Total nitrogen and TOC content in surface sediments collected throughout the lake are found to be highly correlated (r2 = 0.95), indicating a well-homogenized source of OM to the lake bottom. The recurring suspension and deposition of terrestrial sediment may account for significant amounts of OM deposited in offshore regions of the lake. This process effectively separates denser

  12. Study of tributary inflows in Lake Iseo with a rotating physical model

    Marco Pilotti

    2014-03-01

    Full Text Available The influence of Coriolis force on the currents of large lakes is well acknowledged; very few contributions, however, investigate this aspect in medium-size lakes where its relevance could be questionable. In order to study the area of influence of the two major tributary rivers in Lake Iseo, a rotating vertically distorted physical model of the northern part of this lake was prepared and used, respecting both Froude and Rossby similarity. The model has a horizontal length scale factor of 8000 and a vertical scale factor of 500 and was used both in homogeneous and in thermally stratified conditions. We explored the pattern of water circulation in front of the entrance mouth for different hydrologic scenarios at the beginning of spring and in summer. We neglected the influence of winds. The primary purposes of the model were twofold: i to increase our level of knowledge of the hydrodynamics of Lake Iseo by verifying the occurrence of dynamical effects related to the Earth’s rotation on the plume of the two tributaries that enter the northern part of the lake and ii to identify the areas of the lake that can be directly influenced by the tributaries’ waters, in order to provide guidance on water quality monitoring in zones of relevant environmental and touristic value. The results of the physical model confirm the relevant role played by the Coriolis force in the northern part of the lake. Under ordinary flow conditions, the model shows a systematic deflection of the inflowing waters towards the western shore of the lake. The inflow triggers a clockwise gyre within the Lovere bay, to the West of the inflow, and a slow counter-clockwise gyre, to the East of the inflow, that returns water towards the river mouth along the eastern shore. For discharges with higher return period, when only the contribution by Oglio River is relevant, the effect of the Earth’s rotation weakens in the entrance zone and the plume has a more rectilinear pattern

  13. Interaction of nitric oxide with human heme oxygenase-1.

    Wang, Jinling; Lu, Shen; Moënne-Loccoz, Pierre; Ortiz de Montellano, Paul R

    2003-01-24

    NO and CO may complement each other as signaling molecules in some physiological situations. We have examined the binding of NO to human heme oxygenase-1 (hHO-1), an enzyme that oxidizes heme to biliverdin, CO, and free iron, to determine whether inhibition of hHO-1 by NO can contribute to the signaling interplay of NO and CO. An Fe(3+)-NO hHO-1-heme complex is formed with NO or the NO donors NOC9 or 2-(N,N-diethylamino)-diazenolate-2-oxide.sodium salt. Resonance Raman spectroscopy shows that ferric hHO-1-heme forms a 6-coordinated, low spin complex with NO. The nu(N-O) vibration of this complex detected by Fourier transform IR is only 4 cm(-1) lower than that of the corresponding metmyoglobin (met-Mb) complex but is broader, suggesting a greater degree of ligand conformational freedom. The Fe(3+)-NO complex of hHO-1 is much more stable than that of met-Mb. Stopped-flow studies indicate that k(on) for formation of the hHO-1-heme Fe(3+)-NO complex is approximately 50-times faster, and k(off) 10 times slower, than for met-Mb, resulting in K(d) = 1.4 microm for NO. NO thus binds 500-fold more tightly to ferric hHO-1-heme than to met-Mb. The hHO-1 mutations E29A, G139A, D140A, S142A, G143A, G143F, and K179A/R183A do not significantly diminish the tight binding of NO, indicating that NO binding is not highly sensitive to mutations of residues that normally stabilize the distal water ligand. As expected from the K(d) value, the enzyme is reversibly inhibited upon exposure to pathologically, and possibly physiologically, relevant concentrations of NO. Inhibition of hHO-1 by NO may contribute to the pleiotropic responses to NO and CO.

  14. Source identification and mass balance studies of mercury in Lake An-dong, S. Korea

    Han, J.; Byeon, M.; Yoon, J.; Park, J.; Lee, M.; Huh, I.; Na, E.; Chung, D.; Shin, S.; Kim, Y.

    2009-12-01

    In this study, mercury and methylmercury were measured in atmospheric, tributary, open-lake water column, sediment, planktons and fish samples in the catchments area of Lake An-dong, S. Korea. Lake An-dong, an artificial freshwater lake is located on the upstream of River Nak-dong. It has 51.5 km2 of open surface water and 1.33 year of hydraulic residence time. It is a source of drinking water for 0.3 million S. Koreans. Recently, the possibilities of its mercury contamination became an issue since current studies showed that the lake had much higher mercury level in sediment and certain freshwater fish species than any other lakes in S. Korea. This catchments area has the possibilities of historical mercury pollution by the location of more than 50 abandoned gold mines and Young-poong zinc smelter. The objective of this study was to develop a mercury mass balance and identify possible mercury sources in the lake. The results of this study are thus expected to offer valuable insights for the sources of mercury loading through the watershed. In order to estimate the mercury flux, TGM, RGM and particulate mercury were measured using TEKRAN 2537 at the five sites surrounding Lake An-dong from May, 2009 with wet and dry deposition. The fate and transport of mercury in water body were predicted by using EFDC (Environmental Dynamic Fluid Code) and Mercury module in WASP7 (Water quality analysis program) after subsequent distribution into water body, sediments, followed by bioaccumulation and ultimate uptake by humans. The mercury mass balance in Young-poong zinc smelter was also pre-estimated by measuring mercury content in zinc ores, emission gases, sludge, wastewater and products.

  15. Null models for study Rotifers and Crustaceans Zooplankton species richness in Chilean Patagonian lakes

    Escalante, Patricio de los Ríos

    2016-01-01

    Abstract Aims The Patagonian lakes are characterized by their oligotrophy that is the cause of low species number in their zooplankton assemblage. The aim of the present study is to analyze the crustacean and rotifers species number pattern in Patagonian lakes among a latitudinal gradient (40-51 °S). Results The results revealed that there are direct significant correlations between total species with rotifer species, and chlorophyll concentration with crustacean species number, and an inve...

  16. Measurement of Heme Synthesis Levels in Mammalian Cells.

    Hooda, Jagmohan; Alam, Maksudul; Zhang, Li

    2015-07-09

    Heme serves as the prosthetic group for a wide variety of proteins known as hemoproteins, such as hemoglobin, myoglobin and cytochromes. It is involved in various molecular and cellular processes such as gene transcription, translation, cell differentiation and cell proliferation. The biosynthesis levels of heme vary across different tissues and cell types and is altered in diseased conditions such as anemia, neuropathy and cancer. This technique uses [4-(14)C] 5-aminolevulinic acid ([(14)C] 5-ALA), one of the early precursors in the heme biosynthesis pathway to measure the levels of heme synthesis in mammalian cells. This assay involves incubation of cells with [(14)C] 5-ALA followed by extraction of heme and measurement of the radioactivity incorporated into heme. This procedure is accurate and quick. This method measures the relative levels of heme biosynthesis rather than the total heme content. To demonstrate the use of this technique the levels of heme biosynthesis were measured in several mammalian cell lines.

  17. Analysis of the electrochemistry of hemes with Ems spanning 800 mV

    Zheng, Zhong; Gunner, M. R.

    2009-01-01

    tuning in situ Ems. However, the calculated solvation energy vs. experimental Em shows a slope of 0.2 and R2 of 0.5 thus correlates weakly with Ems. All other individual interactions show even less correlation with Em. However the sum of these terms does reproduce the range of observed Ems. Therefore, different proteins use different aspects of their structures to modulate the in situ heme electrochemistry. This study also shows that the calculated Ems are relatively insensitive to different heme partial charges and to the protein dielectric constant used in the simulation. PMID:19003997

  18. Genetic Variability of the Heme Uptake System among Different Strains of the Fish Pathogen Vibrio anguillarum: Identification of a New Heme Receptor

    Mouriño, Susana; Rodríguez-Ares, Isabel; Osorio, Carlos R.; Lemos, Manuel L.

    2005-01-01

    The ability to utilize heme compounds as iron sources was investigated in Vibrio anguillarum strains belonging to serotypes O1 to O10. All strains, regardless of their serotype or isolation origin could utilize hemin and hemoglobin as sole iron sources. Similarly, all of the isolates could bind hemin and Congo red, and this binding was mediated by cell envelope proteins. PCR and Southern hybridization were used to assay the occurrence of heme transport genes huvABCD, which have been previously described in serotype O1. Of 23 strains studied, two serotype O3 isolates proved negative for all huvABCD genes, whereas nine strains included in serotypes O2, O3, O4, O6, O7, and O10 tested negative for the outer membrane heme receptor gene huvA. A gene coding for a novel outer membrane heme receptor was cloned and characterized in a V. anguillarum serotype O3 strain lacking huvA. The new heme receptor, named HuvS, showed significant similarity to other outer membrane heme receptors described in Vibrionaceae, but little homology (39%) to HuvA. This heme receptor was present in 9 out of 11 of the V. anguillarum strains that tested negative for HuvA. Furthermore, complementation experiments demonstrated that HuvS could substitute for the HuvA function in Escherichia coli and V. anguillarum mutants. The huvS and huvA sequences alignment, as well as the analysis of their respective upstream and downstream DNA sequences, suggest that horizontal transfer and recombination might be responsible for generating this genetic diversity. PMID:16332832

  19. Hemopexin and haptoglobin: allies against heme toxicity from hemoglobin not contenders.

    Ann eSmith

    2015-06-01

    Full Text Available The goal here is to describe our current understanding of heme metabolism and the deleterious effects of free heme on immunological processes, endothelial function, systemic inflammation, and various end-organ tissues (e.g. kidney, lung, liver, etc., with particular attention paid to the role of hemopexin (HPX. Because heme toxicity is the impetus for much of the pathology in sepsis, sickle cell disease, and other hemolytic conditions, the biological importance and clinical relevance of HPX, the predominant heme binding protein, is reinforced. A perspective on the function of HPX and haptoglobin (Hp is presented, updating how these two proteins and their respective receptors act simultaneously to protect the body in clinical conditions that entail hemolysis and/or systemic intravascular inflammation. Evidence from longitudinal studies in patients supports that HPX plays a Hp-independent role in genetic and non-genetic hemolytic diseases without the need for global Hp depletion. Evidence also supports that HPX has an important role in the prognosis of complex illnesses characterized predominantly by the presence of hemolysis, such as sickle cell disease, sepsis, hemolytic-uremic syndrome, and conditions involving intravascular and extravascular hemolysis, such as that generated by extracorporeal circulation during cardiopulmonary bypass and from blood transfusions. We propose that quantitating the amounts of plasma heme, HPX, Hb-Hp, heme-HPX and heme-albumin levels in various disease states may aid in the diagnosis and treatment of the above-mentioned conditions, which is crucial to developing targeted plasma protein supplementation (i.e. replenishment therapies for patients with heme toxicity due to HPX depletion.

  20. In vitro Activation of heme oxygenase-2 by menadione and its analogs.

    Vukomanovic, Dragic; Rahman, Mona N; Bilokin, Yaroslav; Golub, Andriy G; Brien, James F; Szarek, Walter A; Jia, Zongchao; Nakatsu, Kanji

    2014-02-18

    Previously, we reported that menadione activated rat, native heme oxygenase-2 (HO-2) and human recombinant heme oxygenase-2 selectively; it did not activate spleen, microsomal heme oxygenase-1. The purpose of this study was to explore some structure-activity relationships of this activation and the idea that redox properties may be an important aspect of menadione efficacy. Heme oxygenase activity was determined in vitro using rat spleen and brain microsomes as the sources of heme oxygenase-1 and -2, respectively, as well as recombinant, human heme oxygenase-2. Menadione analogs with bulky aliphatic groups at position-3, namely vitamins K1 and K2, were not able to activate HO-2. In contrast, several compounds with similar bulky but less lipophilic moieties at position-2 (and -3) were able to activate HO-2 many fold; these compounds included polar, rigid, furan-containing naphthoquinones, furan-benzoxazine naphthoquinones, 2-(aminophenylphenyl)-3-piperidin-1-yl naphthoquinones. To explore the idea that redox properties might be involved in menadione efficacy, we tested analogs such as 1,4-dimethoxy-2-methylnaphthalene, pentafluoromenadione, monohalogenated naphthoquinones, α-tetralone and 1,4-naphthoquinone. All of these compounds were inactive except for 1,4-naphthoquinone. Menadione activated full-length recombinant human heme oxygenase-2 (FL-hHO-2) as effectively as rat brain enzyme, but it did not activate rat spleen heme oxygenase. These observations are consistent with the idea that naphthoquinones such as menadione bind to a receptor in HO-2 and activate the enzyme through a mechanism that may involve redox properties.

  1. Control of heme synthesis during Friend cell differentiation: role of iron and transferrin

    Laskey, J.D.; Ponka, P.; Schulman, H.M.

    1986-01-01

    In many types of cells the synthesis of σ-aminolevulinic acid (ALA) limits the rate of heme formation. However, results from this laboratory with reticulocytes suggest that the rate of iron uptake from 125 I-transferrin (Tf), rather than ALA synthase activity, limits the rate of heme synthesis in erythroid cells. To determine whether changes occur in iron metabolism and the control of heme synthesis during erythroid cell development Friend erythroleukemia cells induced to erythroid differentiation by dimethylsulfoxide (DMSO) were studied. While added ALA stimulated heme synthesis in uninduced Friend cells (suggesting ALA synthase is limiting) it did not do so in induced cells. Therefore the possibility was investigated that, in induced cells, iron uptake from Tf limits and controls heme synthesis. Several aspects of iron metabolism were investigated using the synthetic iron chelator salicylaldehyde isonicotinoyl hydrazone (SIH). Both induced and uninduced Friend cells take up and utilize Fe for heme synthesis directly from Fe-SIH without the involvement of transferrin and transferrin receptors and to a much greater extent than from saturating levels or 59 Fe-Tf (20 μM). Furthermore, in induced Friend cells 100 μM Fe-SIH stimulated 2- 14 C-glycine incorporation into heme up to 3.6-fold as compared to the incorporation observed with saturating concentrations of Fe-Tf. These results indicate that some step(s) in the pathway of iron from extracellular Tf to protoporphyrin, rather than the activity of ALA synthase, limits and controls the overall rate of heme and possibly hemoglobin synthesis in differentiating Friend erythroleukemia cells

  2. Heme biosynthesis and its regulation : Toward understanding and improvement of heme biosynthesis in filamentous fungi.

    S. de Weert; P.J. Punt; Christien Lokman; C.A. van den Hondel; A.C. Franken; A.F. Ram

    2011-01-01

    Heme biosynthesis in fungal host strains has acquired considerable interest in relation to the production of secreted heme-containing peroxidases. Class II peroxidase enzymes have been suggested as eco-friendly replacements of polluting chemical processes in industry. These peroxidases are naturally

  3. Heme biosynthesis and its regulation: Towards understanding and improvement of heme biosynthesis in filamentous fungi

    Franken, A.C.W.; Lokman, B.C.; Ram, A.F.J.; Punt, P.J.; Hondel, C.A.M.J.J. van den; Weert, S. de

    2011-01-01

    Heme biosynthesis in fungal host strains has acquired considerable interest in relation to the production of secreted heme-containing peroxidases. Class II peroxidase enzymes have been suggested as eco-friendly replacements of polluting chemical processes in industry. These peroxidases are naturally

  4. Protein Machineries Involved in the Attachment of Heme to Cytochrome c: Protein Structures and Molecular Mechanisms

    Carlo Travaglini-Allocatelli

    2013-01-01

    Full Text Available Cytochromes c (Cyt c are ubiquitous heme-containing proteins, mainly involved in electron transfer processes, whose structure and functions have been and still are intensely studied. Surprisingly, our understanding of the molecular mechanism whereby the heme group is covalently attached to the apoprotein (apoCyt in the cell is still largely unknown. This posttranslational process, known as Cyt c biogenesis or Cyt c maturation, ensures the stereospecific formation of the thioether bonds between the heme vinyl groups and the cysteine thiols of the apoCyt heme binding motif. To accomplish this task, prokaryotic and eukaryotic cells have evolved distinctive protein machineries composed of different proteins. In this review, the structural and functional properties of the main maturation apparatuses found in gram-negative and gram-positive bacteria and in the mitochondria of eukaryotic cells will be presented, dissecting the Cyt c maturation process into three functional steps: (i heme translocation and delivery, (ii apoCyt thioreductive pathway, and (iii apoCyt chaperoning and heme ligation. Moreover, current hypotheses and open questions about the molecular mechanisms of each of the three steps will be discussed, with special attention to System I, the maturation apparatus found in gram-negative bacteria.

  5. Multi-heme Cytochromes in Shewanella oneidensis MR-1: Structures, functions and opportunities

    Breuer, Marian; Rosso, Kevin M.; Blumberger, Jochen; Butt, Julea N.

    2014-11-05

    Multi-heme cytochromes are employed by a range of microorganisms to transport electrons over distances of up to tens of nanometers. Perhaps the most spectacular utilization of these proteins is in the reduction of extracellular solid substrates, including electrodes and insoluble mineral oxides of Fe(III) and Mn(III/IV), by species of Shewanella and Geobacter. However, multi-heme cytochromes are found in numerous and phylogenetically diverse prokaryotes where they participate in electron transfer and redox catalysis that contributes to biogeochemical cycling of N, S and Fe on the global scale. These properties of multi-heme cytochromes have attracted much interest and contributed to advances in bioenergy applications and bioremediation of contaminated soils. Looking forward there are opportunities to engage multi-heme cytochromes for biological photovoltaic cells, microbial electrosynthesis and developing bespoke molecular devices. As a consequence it is timely to review our present understanding of these proteins and we do this here with a focus on the multitude of functionally diverse multi-heme cytochromes in Shewanella oneidensis MR-1. We draw on findings from experimental and computational approaches which ideally complement each other in the study of these systems: computational methods can interpret experimentally determined properties in terms of molecular structure to cast light on the relation between structure and function. We show how this synergy has contributed to our understanding of multi-heme cytochromes and can be expected to continue to do so for greater insight into natural processes and their informed exploitation in biotechnologies.

  6. Wynoochee Lake and dam flood storage reevaluation study

    Lynch, C.J.

    1993-01-01

    With the desire to increase the revenue generating potential of the Wynoochee Lake and Dam Project the cities of Tacoma and Aberdeen, Washington, have pursued the potential for retrofitting a hydropower plant at the dam. The feasibility of the hydropower plant is dependent on higher average head for power generation. This paper discusses the Corps of Engineers reevaluation of the winter flood control requirements with the aim of raising the elevation of the winter operating pool

  7. Geochemistry of the Cigar Lake uranium deposit: XPS studies

    Sunder, S.; Cramer, J.J.; Miller, N.H.

    1996-01-01

    Samples of uranium ore from the Cigar Lake deposit in northern Saskatchewan, Canada, were analyzed using XPS. High-resolution spectra were recorded for the strongest bands of the major elements (U 4f, C 1 s, O 1 s, Pb 4 f, S 2 p, Cu 2 p, Fe 2 p, and the valence region (0-20 eV)) to obtain chemical state information for these samples. In general, the U VI /U IV ratio was very low, i.e., much less than 0.5, the threshold for the oxidative dissolution of UO 2 . The low values of the U VI /U IV ratio observed for samples from the Cigar Lake deposit indicate thermodynamic stability of the uranium ore in the reduced aqueous environment. Similarities between the disposal vault envisaged in the Canadian Nuclear Fuel Waste Management Program and the Cigar Lake deposit suggest that, if geochemical conditions in the vault were to be similar to those in the deposit, the long-term dissolution of UO 2 fuel would be very minimal. (orig.)

  8. [Estimation of DOC concentrations using CDOM absorption coefficients: a case study in Taihu Lake].

    Jiang, Guang-Jia; Ma, Rong-Hua; Duan, Hong-Tao

    2012-07-01

    Dissolved organic carbon (DOC) is the largest organic carbon stock in water ecosystems, which plays an important role in the carbon cycle in water. Chromophoric dissolved organic matter (CDOM), an important water color variation, is the colored fraction of DOC and its absorption controls the instruction of light under water. The available linkage between DOC concentration and CDOM absorptions enables the determination of DOC accumulations using remote sensing reflectance or radiance in lake waters. The present study explored the multi-liner relationship between CDOM absorptions [a(g) (250) and a(g) (365)] and DOC concentrations in Taihu Lake, based on the available data in 4 cruises (201005, 201101, 201103, 201105) (totally 183 sampling sites). Meanwhile, the results were validated with the data of the experiment carried out from August 29 to September 2, 2011 in Taihu Lake (n = 27). Furthermore, a universal pattern of modeling from remote sensing was built for lake waters. The results demonstrated that this method provided more satisfying estimation of DOC concentrations in Taihu Lake. Except the data obtained in January 2011, the fitted results of which were not conductive to the winter dataset (201101) in Taihu Lake, due to the diverse sources and sinks of DOC and CDOM, the multi-liner relationship was robust for the data collected in the other three cruises (R2 = 0.64, RMSE = 14.31%, n = 164), which was validated using the 201108 sampling dataset (R2 = 0.67, RMSE = 10.58%, n = 27). In addition, the form of the statistic model is universal, to some extent, for other water areas, however, there is difference in the modeling coefficients. Further research should be focused on the parameterization using local data from different lakes, which provides effective methodology for the estimation of DOC concentrations in lakes and other water regions.

  9. Surface-enhanced Raman spectroscopy studies of yellow organic dyestuffs and lake pigments in oil paint.

    Mayhew, Hannah E; Fabian, David M; Svoboda, Shelley A; Wustholz, Kristin L

    2013-08-21

    Identifying natural, organic dyes and pigments is important for the conservation, preservation, and historical interpretation of works of art. Although previous SERS studies have demonstrated high sensitivity and selectivity for red lake pigments using various pretreatment conditions, corresponding investigations of yellow lake pigments and paints are relatively sparse. Here, surface-enhanced Raman scattering (SERS) spectroscopy is used to identify a variety of yellow organic dyestuffs and lake pigments in oil paint. High-quality SERS spectra of yellow dyestuffs (i.e., turmeric, old fustic, Buckthorn berries) and corresponding paints could be obtained with or without sample pretreatment using microliter quantities of HCl and methanol at room temperature. However, the SERS spectra of yellow lake pigments (i.e., Stil de Grain, Reseda lake) and their corresponding oil paints were only observed upon sample pretreatment. Ultimately, we demonstrate a reliable sample treatment protocol for SERS-based identification of turmeric, old fustic, Buckthorn berries, Stil de Grain, and Reseda lake as well as for microscopic samples of the corresponding oil paints.

  10. The Evolution of River–Lake and Urban Compound Systems: A Case Study in Wuhan, China

    Wei Wang

    2015-12-01

    Full Text Available The process of urbanization takes up a lot of wetlands, profoundly changing the natural connection of surrounding river–lake systems, all the while causing serious damage to the environment of connected catchments. Urban systems and river–lake systems are not isolated and static, there is a relation between them which is constantly changing. Based on the idea of system research, the urban system is simplified into four subsystems: environment, infrastructure, social, and economic. These four components interact together, influencing the river–lake system to form a compound system. This paper aims to reflect the features and evolution laws of the compound system, by building a Collaborative Development Model to study the changing of the compound system in Wuhan, China over a 10-year period. The results show that by implementing the Donghu Lake Ecological River Network Engineering Project, the damaged river–lake system in Wuhan showed some improvement. However, in order to improve the sustainability of the compound system in Wuhan, the status of the river–lake system, social system and environment system, which are still comparatively substandard, should be constantly improved. The Collaborative Development Model could also be used in other cities and regions, to provide the basis for sustainable development.

  11. Measured and modelled trends in European mountain lakes: results of fifteen years of cooperative studies

    Michela ROGORA

    2004-02-01

    Full Text Available Papers included in this Special Issue of the Journal of Limnology present results of long-term ecological research on mountain lakes throughout Europe. Most of these studies were performed over the last 15 years in the framework of some EU-funded projects, namely AL:PE 1 and 2, MOLAR and EMERGE. These projects together considered a high number of remote lakes in different areas or lake districts in Europe. Central to the projects was the idea that mountain lakes, while subject to the same chemical and biological processes controlling lowland lakes, are more sensitive to any input from their surroundings and can be used as earlywarning indicators of atmospheric pollution and climate change. A first section of this special issue deal with the results of long-term monitoring programmes at selected key-sites. A second section focuse on site-specific and regional applications of an acidification model designed to reconstruct and predict long-term changes in the chemistry of mountain lakes.

  12. Unique structure and stability of HmuY, a novel heme-binding protein of Porphyromonas gingivalis.

    Halina Wójtowicz

    2009-05-01

    Full Text Available Infection, survival, and proliferation of pathogenic bacteria in humans depend on their capacity to impair host responses and acquire nutrients in a hostile environment. Among such nutrients is heme, a co-factor for oxygen storage, electron transport, photosynthesis, and redox biochemistry, which is indispensable for life. Porphyromonas gingivalis is the major human bacterial pathogen responsible for severe periodontitis. It recruits heme through HmuY, which sequesters heme from host carriers and delivers it to its cognate outer-membrane transporter, the TonB-dependent receptor HmuR. Here we report that heme binding does not significantly affect the secondary structure of HmuY. The crystal structure of heme-bound HmuY reveals a new all-beta fold mimicking a right hand. The thumb and fingers pinch heme iron through two apical histidine residues, giving rise to highly symmetric octahedral iron co-ordination. The tetrameric quaternary arrangement of the protein found in the crystal structure is consistent with experiments in solution. It shows that thumbs and fingertips, and, by extension, the bound heme groups, are shielded from competing heme-binding proteins from the host. This may also facilitate heme transport to HmuR for internalization. HmuY, both in its apo- and in its heme-bound forms, is resistant to proteolytic digestion by trypsin and the major secreted proteases of P. gingivalis, gingipains K and R. It is also stable against thermal and chemical denaturation. In conclusion, these studies reveal novel molecular properties of HmuY that are consistent with its role as a putative virulence factor during bacterial infection.

  13. Limnological study of Lake Shastina, Siskiyou County, California

    Dong, Alex E.; Beatty, Kenneth W.; Averett, Robert C.

    1974-01-01

    Lake Shastina provides water for irrigation in Shasta Valley, as well as recreation. Presently, its shoreline is being developed for summer homes. Surface water constituted more than 90 percent of the approximately 50,000 acre-foot (62-cubic hectometre) inflow to Lake Shastina in the 1972 water year. Controlled outflow is via the Montague Main Canal; however, leakage from the lake through volcanic rocks to the northwest was estimated to be greater than the measured outflow. Appreciable annual changes in the quantity of water in storage in the lake are related mainly to variations in annual inflow.From June through August the lake was thermally stratified. In the spring and summer the epilimnion was often supersaturated with oxygen, while at the same time the hypolimnion was undersaturated and 'often devoid of dissolved oxygen. Vertical stratification of carbon dioxide, carbonate, bicarbonate, hydrogen ion, nitrogen, and phosphorus was also recorded during the spring and summer. Orthophosphate, total phosphorus, and total nitrogen concentrations (organic, ammonium, and nitrate) were highest in the hypolimnion during the period of thermal stratification.Ten-inch (25-centimetre) core samples from the reservoir bottom were chemically analyzed at 0.8-inch (2-centimetre) intervals. The concentrations ranged from 6.3 to 28.9 milligrams per gram of iron, 0.07 to 0.43 milligrams per gram of manganese, 0.4 to 2.7 milligrams per gram of organic nitrogen plus ammonium, and 0.06 to 1.3 milligrams per gram of total phosphorus. Organic matter in the cores ranged from 4 to 14 percent.Green algae and diatoms were the dominant algal types, reaching maximum concentrations of about 7 and 30 million cells per litre, respectively. These phytoplankton occurred near the surface during thermally stratified periods, but were distributed at greater depths during nonthermally stratified periods. Blue-green algae were present only in the spring samples, and reached a maximum concentration of

  14. Long-term Simulation Study about the Impact of submerse Macrophytes on thermal Stratification Dynamics and Transport Processes in an extreme shallow water lake - Lake Federsee

    Wolf, Thomas; Pöschke, Franziska; Pflugbeil, Thomas

    2017-04-01

    Lake Federsee is formed primarily by ice age processes and was subjected to strong siltation processes in post-glacial times, while in the last two centuries anthropogenic impact due to amelioration projects became more important and determined it's morphometry. Lake Federsee has a maximum length of 2.4 km, a maximum width of 1.1 km and an area of approx. 1.4 km2. With respect to it's area Lake Federsee is the third largest lake in the federal state of Baden-Wuerttemberg situated in the south of Germany. It is characterized by its very flat bathymetry with a maximum depth of about 3.15 m and an average depth of about 1 m. In recent years Lake Federsee has undergone a strong reduction of the nutrient content, thus developing from hypertrophic states in the years 1980ies to eutrophic conditions in the years 2000ies. Since 2005 this development is accompanied by a change of the general habitus of the lake converting from a lake dominated by algae to a lake dominated by macrophytes. Changing successions of aquatic plants have been observed in the lake with strong seasonal variations in the composition and density of the vegetation cover, however forming often an almost complete coverage of the lake. In the present study the implementation of the hydrodynamic, three-dimensional model DELFT3D - FLOW for this extreme shallow water lake will be presented. The impact of some numerical parameters will be investigated in a sensitivity study, which is aiming to set up the hydrodynamic model in an optimal way. This 3-dim hydrodynamic model is used to simulate the 3-dim flow field and to investigate the thermal stratification as well as the mixing processes taking place in this lake. The model is run for the simulation time period 2000 - 2016 having a horizontal resolution of dx=dy=50 m and 10 or 20 equidistantly spaced fixed vertical layers giving a vertical resolution of 0.32 or 0.16 m respectively. The timestep is choosen to be dt = 10 s. Analysis of the simulated vertical

  15. Local wisdom in preservation of Lake Toba ecosystems (study on Toba Lake community in the Village of Silalahi I, Sub District of Silahisabungan, Dairi Regency, North Sumatera Province)

    Hamdani Harahap, R.; Humaizi

    2018-03-01

    This study aims to analyze the perception of Batak Toba community in Silalahi I Village, Silahisabungan Subdistrict to the existence of Lake Toba, local wisdom owned by Batak Toba community in Silalahi I Village, Silahisabungan Sub District in order to preserve Lake Toba and recommend policy to revitalize it which is still running, which runs partially or which has not been done at all. The type of research used in this research is descriptive research with qualitative analysis. Data collection was conducted by interviews with key informants and informants i.e. community leaders, religious leaders and customary leaders in the study sites. The results showed that the perception of the Silalahi I Village community of Silahiabungan subdistrict to the existence of Lake Toba is a source of life. That means Lake Toba is a source of sustenance, a source of livelihood such as a place to fish, where to put floating net cages and as a sustenance of tourism activities. The form of local wisdom in preserving the area of Lake Toba is the existence of some sacred places such as Nauli basa, Partonunan stone (Deang Namora), that the entire area of Lake Toba called Tao Silalahi controlled by aunty (Namboru) Deang Namora is a purified area so prohibited spit, wearing jewelry, doing immoral, bathing over 6 o’clock, bringing and eating pork or dogs, bathing naked in the lake, laughing until laughing, and for women if there is a long hair should tie and If you want to take a bath must first permit the grandmother (oppung) guard lake. All local wisdom is still done because they still believe, although there is also rarely done. An effective way to revitalize the existing wisdom locals is to continue to perform the ritual or ceremony of the Statue of Silahisabungan once a year, and continue to obey the advice given by the King of Silahisabungan called Poda sagu-sagu marlangan.

  16. Heme synthesis in normal mouse liver and mouse liver tumors

    Stout, D.L.; Becker, F.F.

    1990-01-01

    Hepatic cancers from mice and rats demonstrate decreased levels of delta-aminolevulinic acid synthase, the rate-limiting enzyme in the heme synthetic pathway, and increased heme oxygenase, the heme-catabolizing enzyme. These findings suggest that diminution of P-450, b5, and catalase in these lesions may result from a heme supply that is limited by decreased heme synthesis and increased heme catabolism. Heme synthesis was measured in mouse liver tumors (MLT) and adjacent tumor-free lobes (BKG) by administering the radiolabeled heme precursors 55 FeCl3 and [2- 14 C]glycine and subsequently extracting the heme for determination of specific activity. Despite reduced delta-aminolevulinic acid synthase activity in MLT, both tissues incorporated [2-14C]glycine into heme at similar rates. At early time points, heme extracted from MLT contained less 55Fe than that from BKG. This was attributed to the findings that MLT took up 55Fe at a slower rate than BKG and had larger iron stores than BKG. The amount of heme per milligram of protein was also similar in both tissues. These findings militate against the hypothesis that diminished hemoprotein levels in MLT result from limited availability of heme. It is probable, therefore, that decreased hemoprotein levels in hepatic tumors are linked to a general program of dedifferentiation associated with the cancer phenotype. Diminution of hemoprotein in MLT may result in a relatively increased intracellular heme pool. delta-Aminolevulinic acid synthase and heme oxygenase are, respectively, negatively and positively regulated by heme. Thus, their alteration in MLT may be due to the regulatory influences of the heme pool

  17. Irradiation of bovine meat: effect of heme-iron concentration

    Mistura, Liliana Perazzini Furtado

    2002-01-01

    The irradiation is often used, nowadays, for meat conservation and it is important to know how much this process interferes with the nutritional quality of the meat. In this study round cut meat, ground and steaks (from a local supermarket) was irradiated with doses of O; 1; 2; 3; 4; 5; 7,5 and 10 kGy (JS-7500 Nordium Inc -Canada) and the interference of irradiation and the process of food preparation on heme-iron (H Fe) content was determined. Half of the sample was kept raw and the other half was grilled in a pre-warmed oven at 250 deg C for 9 min and a controlled humidity of 70%. The chemical composition, the total iron (T Fe) (EM) and the heme iron concentration were determined (Hornsey,1956) and the sensorial quality evaluated. The average T Fe concentration of raw and ground , ground and grilled, raw steaks and grilled steak meat, on dry and degreased basis was 113 mug/g, 121 mug/g , 91 mug/g and 77 mug/g; and the H Fe concentration 105 mug/g (93% of T Fe) , 88 mug/g (73% of T Fe), 90 mug/g (99% of T Fe) and 52 mug/g (68% of T Fe) respectively. Data were evaluated by ANOVA with fixed effects and multiple comparisons. The irradiation neither altered the chemical composition nor the proportion of heme iron of meat. The preparation conditions (temperature, cooking time, environment humidity, meat presentation) of the sample interfered more with the heme iron content than the irradiation. With the sensorial analysis we verified that meats irradiated with doses of 3 kGy were better evaluated in softness and succulency attributes than the others. Meat submitted to irradiation doses up to 3 kGy were accepted by the specialists' panel. (author)

  18. Heme Iron Content in Lamb Meat Is Differentially Altered upon Boiling, Grilling, or Frying as Assessed by Four Distinct Analytical Methods

    Pourkhalili, Azin; Mirlohi, Maryam; Rahimi, Ebrahim

    2013-01-01

    Lamb meat is regarded as an important source of highly bioavailable iron (heme iron) in the Iranians diet. The main objective of this study is to evaluate the effect of traditional cooking methods on the iron changes in lamb meat. Four published experimental methods for the determination of heme iron were assessed analytically and statistically. Samples were selected from lambs' loin. Standard methods (AOAC) were used for proximate analysis. For measuring heme iron, the results of four experi...

  19. Water ecological carrying capacity of urban lakes in the context of rapid urbanization: A case study of East Lake in Wuhan

    Ding, Lei; Chen, Kun-lun; Cheng, Sheng-gao; Wang, Xu

    With the excessive development of social economy, water scarcity and water environment deterioration become a common phenomenon in metropolis. As a crucial component of urban water environment system, urban lake is mainly influenced by social economic system and tourism system. In this paper, a framework for quantitatively evaluating development sustainability of urban lake was established by a multi-objective model that represented water ecological carrying capacity (WECC). And nine key indicators including population, irrigation area, tourist quantity, the average number of hotel daily reception, TP, TN, CODMn, BOD5 were chosen from urban social-economy system and natural resilience aspects, with their index weight was determined by using the Structure Entropy Weight method. Then, we took Wuhan East Lake, the largest urban lake in China as a case study, and selected five time sections including 2002, 2004, 2007, 2009 and 2012 to synthetically evaluate and comparatively analyze the dynamic change of WECC. The results showed that: firstly, the water ecological carrying capacity values of the East Lake in five time sections were 1.17, 1.07, 1.64, 1.53 and 2.01 respectively, which all exceeded 1 and increased fluctuation. The rapid growth of population and GDP lead to sharply increasing demand for water quantity. However, a large amount of the domestic sewage and industrial waste led by economic development increases pressure on ecological environment of urban lakes. Secondly, the carrying capacity of the East Lake for tourist activities was still low. The value in 2012 was only 0.22, keeping at a slowly increasing phase, which indicates that the East Lake has large opportunity and space for developing the water resource carrying capacity and could make further efforts to attract tourists. Moreover, the WECC of the East Lake was mainly affected by rapid social and economic development and water environment damage caused by organic pollutants. From the view of urban

  20. Vegetation changes and human activity around Lake Łańskie (Olsztyn Lake District, NE Poland from the mid Holocene, based on palynological study

    Madeja Jacek

    2013-12-01

    Full Text Available Bottom sediments of Lake Łańskie in NE Poland (Olsztyn Lake District were studied by pollen analysis, and vegetation changes from ca 4800 BC to modern times were reconstructed based on the results. Due to rapid sedimentation the changes in plant cover are recorded with high resolution. The variation of pollen spectra composition reflects changing shares of deciduous trees and the continuous dominance of pine forest. Nowadays the surroundings of Lake Łańskie are also heavily forested but as early as 1100 AD the deciduous trees began to be eliminated. On the basis of pollen data, five phases of increased human activity were distinguished. Based on the available archaeological chronology of local settlements, the first stage is connected with para-Neolithic groups of Ząbie-Szestno type and the Lusatian culture. They are followed by the West Baltic Barrow culture, Wielbark culture and Early Medieval Prussian tribes. The pollen record shows low intensity of exploitation of the terrain around Lake Łańskie, probably attributable to the brevity of episodes of human occupation in the near vicinity of the lake. The last phase, covering part of the Middle Ages (since ca 1000 AD and modern times, is reflected in the most distinct vegetation changes on the pollen diagram, caused by increased intensity of settlement. In spite of the distinct diminution of forest cover around the lake the scale of deforestation was much lower than at other sites in NE Poland.

  1. Irradiation of bovine meat: effect of heme-iron concentration.; Irradiacao de carne bovina: efeito na concentracao de ferro heme

    Mistura, Liliana Perazzini Furtado

    2002-07-01

    The irradiation is often used, nowadays, for meat conservation and it is important to know how much this process interferes with the nutritional quality of the meat. In this study round cut meat, ground and steaks (from a local supermarket) was irradiated with doses of O; 1; 2; 3; 4; 5; 7,5 and 10 kGy (JS-7500 Nordium Inc -Canada) and the interference of irradiation and the process of food preparation on heme-iron (H Fe) content was determined. Half of the sample was kept raw and the other half was grilled in a pre-warmed oven at 250 deg C for 9 min and a controlled humidity of 70%. The chemical composition, the total iron (T Fe) (EM) and the heme iron concentration were determined (Hornsey,1956) and the sensorial quality evaluated. The average T Fe concentration of raw and ground , ground and grilled, raw steaks and grilled steak meat, on dry and degreased basis was 113 mug/g, 121 mug/g , 91 mug/g and 77 mug/g; and the H Fe concentration 105 mug/g (93% of T Fe) , 88 mug/g (73% of T Fe), 90 mug/g (99% of T Fe) and 52 mug/g (68% of T Fe) respectively. Data were evaluated by ANOVA with fixed effects and multiple comparisons. The irradiation neither altered the chemical composition nor the proportion of heme iron of meat. The preparation conditions (temperature, cooking time, environment humidity, meat presentation) of the sample interfered more with the heme iron content than the irradiation. With the sensorial analysis we verified that meats irradiated with doses of 3 kGy were better evaluated in softness and succulency attributes than the others. Meat submitted to irradiation doses up to 3 kGy were accepted by the specialists' panel. (author)

  2. Conversion of a heme-based oxygen sensor to a heme oxygenase by hydrogen sulfide: effects of mutations in the heme distal side of a heme-based oxygen sensor phosphodiesterase (Ec DOS)

    Du, Y.; Liu, G.; Yan, Y.; Huang, D.; Luo, W.; Martínková, M.; Man, Petr; Shimizu, T.

    2013-01-01

    Roč. 26, č. 5 (2013), s. 839-852 ISSN 0966-0844 Institutional support: RVO:61388971 Keywords : Heme oxygenase * Heme protein * Hydrogen sulfide Subject RIV: CE - Biochemistry Impact factor: 2.689, year: 2013

  3. Rapid, convenient method for screening imidazole-containing compounds for heme oxygenase inhibition.

    Vlahakis, Jason Z; Rahman, Mona N; Roman, Gheorghe; Jia, Zongchao; Nakatsu, Kanji; Szarek, Walter A

    2011-01-01

    Sensitive assays for measuring heme oxygenase activity have been based on the gas-chromatographic detection of carbon monoxide using elaborate, expensive equipment. The present study describes a rapid and convenient method for screening imidazole-containing candidates for inhibitory activity against heme oxygenase using a plate reader, based on the spectroscopic evaluation of heme degradation. A PowerWave XS plate reader was used to monitor the absorbance (as a function of time) of heme bound to purified truncated human heme oxygenase-1 (hHO-1) in the individual wells of a standard 96-well plate (with or without the addition of a test compound). The degradation of heme by heme oxygenase-1 was initiated using l-ascorbic acid, and the collected relevant absorbance data were analyzed by three different methods to calculate the percent control activity occurring in wells containing test compounds relative to that occurring in control wells with no test compound present. In the cases of wells containing inhibitory compounds, significant shifts in λ(max) from 404 to near 412 nm were observed as well as a decrease in the rate of heme degradation relative to that of the control. Each of the three methods of data processing (overall percent drop in absorbance over 1.5h, initial rate of reaction determined over the first 5 min, and estimated pseudo first-order reaction rate constant determined over 1.5h) gave similar and reproducible results for percent control activity. The fastest and easiest method of data analysis was determined to be that using initial rates, involving data acquisition for only 5 min once reactions have been initiated using l-ascorbic acid. The results of the study demonstrate that this simple assay based on the spectroscopic detection of heme represents a rapid, convenient method to determine the relative inhibitory activity of candidate compounds, and is useful in quickly screening a series or library of compounds for heme oxygenase inhibition

  4. Molecular hijacking of siroheme for the synthesis of heme and d1 heme.

    Bali, Shilpa; Lawrence, Andrew D; Lobo, Susana A; Saraiva, Lígia M; Golding, Bernard T; Palmer, David J; Howard, Mark J; Ferguson, Stuart J; Warren, Martin J

    2011-11-08

    Modified tetrapyrroles such as chlorophyll, heme, siroheme, vitamin B(12), coenzyme F(430), and heme d(1) underpin a wide range of essential biological functions in all domains of life, and it is therefore surprising that the syntheses of many of these life pigments remain poorly understood. It is known that the construction of the central molecular framework of modified tetrapyrroles is mediated via a common, core pathway. Herein a further branch of the modified tetrapyrrole biosynthesis pathway is described in denitrifying and sulfate-reducing bacteria as well as the Archaea. This process entails the hijacking of siroheme, the prosthetic group of sulfite and nitrite reductase, and its processing into heme and d(1) heme. The initial step in these transformations involves the decarboxylation of siroheme to give didecarboxysiroheme. For d(1) heme synthesis this intermediate has to undergo the replacement of two propionate side chains with oxygen functionalities and the introduction of a double bond into a further peripheral side chain. For heme synthesis didecarboxysiroheme is converted into Fe-coproporphyrin by oxidative loss of two acetic acid side chains. Fe-coproporphyrin is then transformed into heme by the oxidative decarboxylation of two propionate side chains. The mechanisms of these reactions are discussed and the evolutionary significance of another role for siroheme is examined.

  5. Adenoviral transfer of the heme oxygenase-1 gene protects striatal astrocytes from heme-mediated oxidative injury.

    Teng, Zhi-Ping; Chen, Jing; Chau, Lee-Young; Galunic, Nicholas; Regan, Raymond F

    2004-11-01

    Heme oxygenase-1 (HO-1) is induced in the CNS after hemorrhage, and may have an effect on injury to surrounding tissue. Hemin, the preferred substrate of HO, is a neurotoxin that is present in intracranial hematomas. In a prior study, we observed that HO inhibitors increased the vulnerability of cultured cortical astrocytes to heme-mediated oxidative injury. To investigate the effect of HO more specifically, we used an adenoviral vector encoding the human HO-1 gene to specifically increase HO-1 expression. Incubation with 100 MOI of the HO-1 adenovirus (Adv-HHO-1) for 24 h increased both HO-1 protein and HO activity; a control adenovirus lacking the HO-1 gene had no effect. Using a DNA probe that was specific for human HO-1, 80.5 +/- 7.2% of astrocytes were observed to be infected by in situ hybridization. The cell death produced by 30-60 microM hemin was significantly reduced by pretreatment with 100 MOI Adv-HHO-1, as assessed by LDH release, propidium iodide exclusion, and MTT reduction assay. The threefold increase in cell protein oxidation produced by hemin was also attenuated in cultures pretreated with Adv-HHO-1. These results support the hypothesis that HO-1 protects astrocytes from heme-mediated oxidative injury. Specifically increasing astrocytic HO-1 by gene transfer may have a beneficial effect on hemorrhagic CNS injury.

  6. Executive summary. Conceptual studies nuclear energy center Lake Hartwell, S.C., Phase III

    1981-01-01

    This document summarizes a conceptual study on the feasibility and practicality of developing a nuclear energy center (NEC) at a specific site in the SSEB region. The site selected for this conceptual study is at Lake Hartwell, South Carolina. The conceptual NEC at Lake Hartwell consists of twelve 1250-MW(e) LWRs arranged on the site in four cluster of three units each, know as triads. The nominal distance between triads was selected as 2-1/2 miles. The total electric output of 15,000 MWe to be generated by the NEC would be transmitted to five major utilities in South Carolina, North Carolina, and Georgia. Objective of the study was to assess the technical, socioeconomic, environmental, and institutional issues relating to the NEC at the conceptual study site. The basic finding was that the concept of a NEC on the Lake Hartwell site is feasible, but further analysis of institutional issues and possible legislation would be required

  7. Heme and erythropoieis: more than a structural role

    Chiabrando, Deborah; Mercurio, Sonia; Tolosano, Emanuela

    2014-01-01

    Erythropoiesis is the biological process that consumes the highest amount of body iron for heme synthesis. Heme synthesis in erythroid cells is finely coordinated with that of alpha (α) and beta (β)-globin, resulting in the production of hemoglobin, a tetramer of 2α- and 2β-globin chains, and heme as the prosthetic group. Heme is not only the structural component of hemoglobin, but it plays multiple regulatory roles during the differentiation of erythroid precursors since it controls its own ...

  8. Experimental studies on intake headloss of a blasted lake tap

    Yang, James; Billstein, Mats; Engström, Fredrik; Strand, Rikard

    2014-01-01

    In existing reservoirs, construction of an intake is sometimes achieved by so-called lake tapping, a submerged tunnel piercing by blasting out the rock plug at the intake. The blasting process involves phases of rock, water, air and gas released from the explosive charge; the resulting entrance profile often differs from design assumptions. The intake headloss is a factor of concern for power generation. For a vertical intake formed by lake tapping, experiments have been carried out in a 1:30 physical model to examine the effect of entrance shapes on intake headlosses. The purpose is that, if there is potential to reduce the headlosses, the originally blasted intake shape would be modified. In the model, five alternative shapes are evaluated. The test results show that to enlarge the vertical shaft area is the most effective way to reduce the intake headloss; to further blast out a narrow channel upstream does not give much effect. Bearing in mind the risk of free-surface vortex at the intake, the influence of the intake modifications on vortex is also checked

  9. A preliminary study on sedimentation rate in Tasek Bera Lake estimated using Pb-210 dating technique

    Wan Zakaria Wan Muhamad Tahir; Johari Abdul Latif; Juhari Mohd Yusof; Kamaruzaman Mamat; Gharibreza, M.R.

    2010-01-01

    Tasek Bera is the largest natural lake system (60 ha) in Malaysia located in southwest Pahang. The lake is a complex dendritic system consisting of extensive peat-swamp forests. The catchment was originally lowland dipterocarp forest, but this has nearly over the past four decades been largely replaced with oil palm and rubber plantations developed by the Federal Land Development Authority (FELDA). Besides the environmentally importance of Tasek Bera, it is seriously subjected to erosion, sedimentation and morphological changes. Knowledge and information of accurate sedimentation rate and its causes are of utmost importance for appropriate management of lakes and future planning. In the present study, environmental 210 Pb (natural) dating technique was applied to determine sedimentation rate and pattern as well as the chronology of sediment deposit in Tasek Bera Lake. Three undisturbed core samples from different locations at the main entry and exit points of river mouth and in open water within the lake were collected during a field sampling campaign in October 2009 and analyzed for 210 Pb using gamma spectrometry method. Undisturbed sediments are classified as organic soils to peat with clayey texture that composed of 93 % clay, 5 % silt, and 2 % very fine sand. Comparatively higher sedimentation rates in the entry (0.06-1.58 cm/ yr) and exit (0.05-1.55 cm/ yr) points of the main river mouth as compared to the lakes open water (0.02- 0.74 cm/ yr) were noticed. Reasons for the different pattern of sedimentation rates in this lake and conclusion are discussed in this paper. (author)

  10. Study of the wide area of a lake with remote sensing

    Lazaridou, Maria A.; Karagianni, Aikaterini C.

    2016-08-01

    Water bodies are particularly important for environment and development issues. Their study requires multiple information. Remote sensing has been proven useful in the above study. This paper concerns the wide area of Lake Orestiada in the region of Western Macedonia in Greece. The area is of particular interest because Lake Orestiada is included in the Natura 2000 network and is surrounded by diverse landcovers as built up areas and agricultural land. Multispectral and thermal Landsat 5 satellite images of two time periods are being used. Their processing is being done by Erdas Imagine software. The general physiognomy of the area and the lake shore are examined after image enhancement techniques and image interpretation. Directions of the study concern geomorphological aspects, land covers, estimation of surface temperature as well as changes through time.

  11. A Floristic Study of Hamun Lake Basin, South East of Iran

    Maryam Keshavarzi

    2017-06-01

    Full Text Available Lake Hamun is the largest freshwater resource in Iran with area of about 3820 km2. The present study aims to evaluate the floristic elements of the studied site. Plant samples were gathered from nature, from March to July at the growing season. Life form and chorotype of plants in Lake Hamun basin were investigated. Totally 128 plant species belonging to 80 genera and 30 families were identified. Families as Poaceae, Amaranthaceae and Fabaceae were the most dominant and frequent families. Considering biological types revealed that the most frequent forms were therophytes (61% and hemicryptophytes (17%. Floristic elements of the area were mainly Iranotouranian mixed with Saharo-Arabian and Sindu-Sudanian types, although multi- and bi- regional elements were also frequent. As the lake has recently become an international conserved area, the complete biological and ecological study of the site is a necessity.

  12. Red meat and colon cancer : how dietary heme initiates hyperproliferation

    IJssennagger, N.

    2012-01-01

    Colorectal cancer is a leading cause of cancer deaths in Western countries. The risk to develop colorectal cancer is associated with the intake of red meat. Red meat contains the porphyrin pigment heme. Heme is an irritant for the colonic wall and it is previously shown that the addition of heme

  13. Heme oxygenase activity increases after exercise in healthy volunteers

    AbstractHeme oxygenase (HO) is an essential, rate-limiting protein which participates in the catabolism of heme to iron, carbon monoxide (CO), and biliverdin. The alpha methene bridge carbon of the heme is eliminated as CO which can be measured as blood carboxyhemoglobin (COHb)....

  14. Zonation of heme synthesis enzymes in mouse liver and their regulation by β-catenin and Ha-ras.

    Braeuning, Albert; Schwarz, Michael

    2010-11-01

    Cytochrome P450 (CYP) hemoproteins play an important role in hepatic biotransformation. Recently, β-catenin and Ha-ras signaling have been identified as players controlling transcription of various CYP genes in mouse liver. The aim of the present study was to analyze the role of β-catenin and Ha-ras in the regulation of heme synthesis. Heme synthesis-related gene expression was analyzed in normal liver, in transgenic mice expressing activated β-catenin or Ha-ras, and in hepatomas. Regulation of the aminolevulinate dehydratase promoter was studied in vitro. Elevated expression of mRNAs and proteins involved in heme biosynthesis was linked to β-catenin activation in perivenous hepatocytes, in transgenic hepatocytes, and in hepatocellular tumors. Stimulation of the aminolevulinate dehydratase promoter by β-catenin was independent of the β-catenin/T-cell-specific transcription factor dimer. By contrast, activation of Ha-ras repressed heme synthesis-related gene expression. The present data suggest that β-catenin enhances the expression of both CYPs and heme synthesis-related genes, thus coordinating the availability of CYP apoprotein and its prosthetic group heme. The reciprocal regulation of heme synthesis by β-catenin and Ha-ras-dependent signaling supports our previous hypothesis that antagonistic action of these pathways plays a major role in the control of zonal gene expression in healthy mouse liver and aberrant expression patterns in hepatocellular tumors.

  15. Delayed globin synthesis leads to excess heme and the macrocytic anemia of Diamond Blackfan anemia and del(5q) myelodysplastic syndrome.

    Yang, Zhantao; Keel, Siobán B; Shimamura, Akiko; Liu, Li; Gerds, Aaron T; Li, Henry Y; Wood, Brent L; Scott, Bart L; Abkowitz, Janis L

    2016-05-11

    Diamond Blackfan anemia (DBA) and myelodysplastic syndrome (MDS) with isolated del(5q) are severe macrocytic anemias; although both are associated with impaired ribosome assembly, why the anemia occurs is not known. We cultured marrow cells from DBA (n = 3) and del(5q) MDS (n = 6) patients and determined how heme (a toxic chemical) and globin (a protein) are coordinated. We show that globin translation initiates slowly, whereas heme synthesis proceeds normally. This results in insufficient globin protein, excess heme and excess reactive oxygen species in early erythroid precursors, and CFU-E (colony-forming unit-erythroid)/proerythroblast cell death. The cells that can more rapidly and effectively export heme or can slow heme synthesis preferentially survive and appropriately mature. Consistent with these observations, treatment with 10 μM succinylacetone, a specific inhibitor of heme synthesis, improved the erythroid cell output of DBA and del(5q) MDS marrow cultures by 68 to 95% (P = 0.03 to 0.05), whereas the erythroid cell output of concurrent control marrow cultures decreased by 4 to 13%. Our studies demonstrate that erythropoiesis fails when heme exceeds globin. Our data further suggest that therapies that decrease heme synthesis (or facilitate heme export) could improve the red blood cell production of persons with DBA, del(5q) MDS, and perhaps other macrocytic anemias. Copyright © 2016, American Association for the Advancement of Science.

  16. Heme Exporter FLVCR1a Regulates Heme Synthesis and Degradation and Controls Activity of Cytochromes P450

    Vinchi, Francesca; Ingoglia, Giada; Chiabrando, Deborah; Mercurio, Sonia; Turco, Emilia; Silengo, Lorenzo; Altruda, Fiorella; Tolosano, Emanuela

    2014-01-01

    Background & Aims The liver has one of the highest rates of heme synthesis of any organ. More than 50% of the heme synthesized in the liver is used for synthesis of P450 enzymes, which metabolize exogenous and endogenous compounds that include natural products, hormones, drugs, and carcinogens. Feline leukemia virus subgroup C cellular receptor 1a (FLVCR1a) is plasma membrane heme exporter that is ubiquitously expressed and controls intracellular heme content in hematopoietic lineages. We inv...

  17. Field and numerical studies of flow structure in Lake Shira (Khakassia) in summer

    Yakubaylik, Tatyana; Kompaniets, Lidia

    2014-05-01

    Investigations of Lake Shira are conducted within a multidisciplinary approach that includes the study of biodiversity, biochemistry, geology of lake sediments, as well as its hydrophysics. Our report focuses on field measurements in the lake during the 2009 - 2013 and numerical modeling of flow structure. The flow velocity, temperature and salinity distribution and fluctuations of the thermocline (density) were measured in summer. An analysis of spatial and temporal variability of the major hydrophysical characteristics leads us to conclusion that certain meteorological conditions may cause internal waves in this lake. Digital terrain model is constructed from measurements of Lake bathymetry allowing us to carry out numerical simulation. Three-dimensional primitive equation numerical model GETM is applied to simulate hydrophysical processes in Lake Shira. The model is hydrostatic and Boussinesq. An algorithm of high order approximation is opted for calculating the equations of heat and salt transfer. Temperature and salinity distributions resulting from field observations are taken as initial data for numerical simulations. Model calculations as well as calculations with appropriate real wind pattern being observed on Lake Shira have been carried out. In the model calculations we follow (1). Significant differences are observed between model calculations with constant wind and calculations with real wind pattern. Unsteady wind pattern leads to the appearance of horizontal vortexes and a significant increase of vertical fluctuations in temperature (density, impurities). It causes lifting of the sediments to the upper layers at the areas where the thermocline contacts the bottom. It is important for understanding the overall picture of the processes occurring in the lake in summer. Comparison of the results of numerical experiments with the field data shows the possibility of such a phenomena in Lake Shira. The work was supported by the Russian Foundation for

  18. PILOT STUDIES WITH A PHOTOGRAMMETRIC GLACIER LAKE OUTBURST FLOOD EARLY WARNING SYSTEM

    H. G. Maas

    2012-07-01

    Full Text Available Glacier Lake Outburst Floods (GLOFs depict an environmental risk with an increasing damage potential in many regions of the world. GLOFs are often caused by glacier margin lakes, which suddenly find a drainage path underneath the bottom of a glacier, which is destabilized and retreating as a consequence of local or global climate changes. In a typical GLOF event, a glacier margin lake may drain completely in 24 hours, causing a large flood wave in the area downstream the glacier. The paper documents some recent GLOF events in the Northern Patagonian Icefield (Chile and presents a terrestrial photogrammetric glacier margin lake monitoring system. The system is based on a camera taking images at regular time intervals. In these images, variations of the water level can be detected by tracking the water-land interface at pre-defined image spots. Due to the drainage mechanism, which is characterized by progressive erosion and melting at the bottom of the glacier, GLOFs are indicated by a progressive water level drop in the lake. Water level changes may be detected with subpixel accuracy by image sequence processing methods. If a 3D model of the lake bottom topography (or at least one height profile through the lake exists, water level changes in monoscopic image sequences may be transformed into volume loss. The basic idea herein is the intersection of a terrain profile with a water level detected in the image and projected into object space. The camera orientation is determined through a GPS-supported photogrammetric network. Camera orientation changes, which may for instance be induced by wind, can be compensated by tracking some fiducial marks in the image. The system has been used in a pilot study at two glacier margin lakes in the Northern Patagonian Icefield. These lakes have a depth of about 80 - 100 meters. The larger one has a length of 5 km and a maximum volume of about 200,000,000 cubic meters. During the pilot study, several GLOF events

  19. Final report. Conceptual studies nuclear energy center Lake Hartwell, S.C., Phase III

    1981-01-01

    This document summarizes a conceptual study on the feasibility and practicality of developing a nuclear energy center (NEC) at a specific site in the SSEB region. The site selected for this conceptual study is at Lake Hartwell, South Carolina. The conceptual NEC at Lake Hartwell consists of twelve nuclear electric generating units, arranged on the site in four clusters of three units each, known as triads. The nominal distance between triads was selected as 2-1/2 miles. Each unit was assumed to be a 1250 MW(e). The total electric output of 15,000 MWe would be transmitted to five major utilities in South Carolina, North Carolina, and Georgia. The basic finding was that the concept of a NEC on the Lake Hartwell site is feasible, but further analysis of institutional issues and possible legislation would be required

  20. An Integrated Approach for Understanding Anthropogenic and Climatic Impacts on Lakes: A Case study from Lake Iznik, Turkey

    Derin, Y.; Milewski, A.; Fryar, A. E.; Schroeder, P.

    2013-12-01

    Lakes are among the most vital natural water resource, providing many environmental and economic advantages to a region. Unfortunately, many lakes are disappearing or continue to be polluted as industrial and agricultural practices increase to keep pace with rising populations. Lake Iznik, the biggest lake (approximately 300 km2) in the Marmara Region in Turkey, is a significant water resource as it provides opportunities for recreational activities, agriculture, industry, and water production for the region. However, rapid population growth combined with poor land management practices in this water basin has contributed to decreased water quality and water levels. As a result, Lake Iznik has switched from being Mesotrophic to Eutrophic in the past thirty years. This research aims to understand both the anthropogenic and climatic impacts on Lake Iznik. An integrated approach combining satellite remote sensing, hydrogeology, hydrologic modeling, and climatology was utilized to identify the source and timing responsible for the decline in water quality and quantity. Specifically, Landsat TM images from 1990, 2000, 2005, and 2010 were collected, processed, and analyzed for changes in landuse/landcover and surface area extent of Lake Iznik. Water level and water quality data (e.g. streamflow, lake level, pH, conductivity, total nitrogen, total dissolved solid etc.) collected from the General Directorate of State Hydraulic Works (DSI) from 1980-2012 were obtained from 4 stations and compared to the Landsat landuse mosaics. Meteorological data collected from Turkish State Meteorological Service from 1983-2012 were obtained from 3 stations (precipitation, temperature, atmospheric pressure, relative humidity, vapor pressure, wind speed and pan evaporation). A hydrologic model using MIKE21 was constructed to measure the change in streamflow and subsequent lake level as a result of changes in both land use and climate. Results have demonstrated the drop in water level from

  1. Water quality monitoring: A comparative case study of municipal and Curtin Sarawak's lake samples

    Anand Kumar, A.; Jaison, J.; Prabakaran, K.; Nagarajan, R.; Chan, Y. S.

    2016-03-01

    In this study, particle size distribution and zeta potential of the suspended particles in municipal water and lake surface water of Curtin Sarawak's lake were compared and the samples were analysed using dynamic light scattering method. High concentration of suspended particles affects the water quality as well as suppresses the aquatic photosynthetic systems. A new approach has been carried out in the current work to determine the particle size distribution and zeta potential of the suspended particles present in the water samples. The results for the lake samples showed that the particle size ranges from 180nm to 1345nm and the zeta potential values ranges from -8.58 mV to -26.1 mV. High zeta potential value was observed in the surface water samples of Curtin Sarawak's lake compared to the municipal water. The zeta potential values represent that the suspended particles are stable and chances of agglomeration is lower in lake water samples. Moreover, the effects of physico-chemical parameters on zeta potential of the water samples were also discussed.

  2. Limnological controls on stable isotope records of late-holocene palaeoenvironment change in sw greenland: A paired lake study

    Olsen, Jesper; John Anderson, N.; Leng, M.J.

    2013-01-01

    Stable isotope records are increasingly being used in palaeoenvironmental studies of Arctic lakes. Here we compare stable isotope and elemental records (δ13C, δ15N, C/N) with high resolution XRF-derived geochemical and colour data from low Arctic lakes (SS1220 and SS85) in southwest Greenland. Lake...... SS1220 sediments are laminated gyttja whereas SS85 consist of homogeneous gyttja, both records cover the last c. 5000 years. d13C and carbon content suggest that organic matter in both lakes is predominantly autochthonous. The C/N variability, ranging between 11 and 15, is interpreted...... composition of lake sediments when there is a reasonable understanding of limnological processes, and records may be lake specific....

  3. ATP Binding Cassette Transporter Mediates Both Heme and Pesticide Detoxification in Tick Midgut Cells.

    Flavio Alves Lara

    Full Text Available In ticks, the digestion of blood occurs intracellularly and proteolytic digestion of hemoglobin takes place in a dedicated type of lysosome, the digest vesicle, followed by transfer of the heme moiety of hemoglobin to a specialized organelle that accumulates large heme aggregates, called hemosomes. In the present work, we studied the uptake of fluorescent metalloporphyrins, used as heme analogs, and amitraz, one of the most regularly used acaricides to control cattle tick infestations, by Rhipicephalus (Boophilus microplus midgut cells. Both compounds were taken up by midgut cells in vitro and accumulated inside the hemosomes. Transport of both molecules was sensitive to cyclosporine A (CsA, a well-known inhibitor of ATP binding cassette (ABC transporters. Rhodamine 123, a fluorescent probe that is also a recognized ABC substrate, was similarly directed to the hemosome in a CsA-sensitive manner. Using an antibody against conserved domain of PgP-1-type ABC transporter, we were able to immunolocalize PgP-1 in the digest vesicle membranes. Comparison between two R. microplus strains that were resistant and susceptible to amitraz revealed that the resistant strain detoxified both amitraz and Sn-Pp IX more efficiently than the susceptible strain, a process that was also sensitive to CsA. A transcript containing an ABC transporter signature exhibited 2.5-fold increased expression in the amitraz-resistant strain when compared with the susceptible strain. RNAi-induced down-regulation of this ABC transporter led to the accumulation of metalloporphyrin in the digestive vacuole, interrupting heme traffic to the hemosome. This evidence further confirms that this transcript codes for a heme transporter. This is the first report of heme transport in a blood-feeding organism. While the primary physiological function of the hemosome is to detoxify heme and attenuate its toxicity, we suggest that the use of this acaricide detoxification pathway by ticks may

  4. ATP Binding Cassette Transporter Mediates Both Heme and Pesticide Detoxification in Tick Midgut Cells

    Lara, Flavio Alves; Pohl, Paula C.; Gandara, Ana Caroline; Ferreira, Jessica da Silva; Nascimento-Silva, Maria Clara; Bechara, Gervásio Henrique; Sorgine, Marcos H. F.; Almeida, Igor C.; Vaz, Itabajara da Silva; Oliveira, Pedro L.

    2015-01-01

    In ticks, the digestion of blood occurs intracellularly and proteolytic digestion of hemoglobin takes place in a dedicated type of lysosome, the digest vesicle, followed by transfer of the heme moiety of hemoglobin to a specialized organelle that accumulates large heme aggregates, called hemosomes. In the present work, we studied the uptake of fluorescent metalloporphyrins, used as heme analogs, and amitraz, one of the most regularly used acaricides to control cattle tick infestations, by Rhipicephalus (Boophilus) microplus midgut cells. Both compounds were taken up by midgut cells in vitro and accumulated inside the hemosomes. Transport of both molecules was sensitive to cyclosporine A (CsA), a well-known inhibitor of ATP binding cassette (ABC) transporters. Rhodamine 123, a fluorescent probe that is also a recognized ABC substrate, was similarly directed to the hemosome in a CsA-sensitive manner. Using an antibody against conserved domain of PgP-1-type ABC transporter, we were able to immunolocalize PgP-1 in the digest vesicle membranes. Comparison between two R. microplus strains that were resistant and susceptible to amitraz revealed that the resistant strain detoxified both amitraz and Sn-Pp IX more efficiently than the susceptible strain, a process that was also sensitive to CsA. A transcript containing an ABC transporter signature exhibited 2.5-fold increased expression in the amitraz-resistant strain when compared with the susceptible strain. RNAi-induced down-regulation of this ABC transporter led to the accumulation of metalloporphyrin in the digestive vacuole, interrupting heme traffic to the hemosome. This evidence further confirms that this transcript codes for a heme transporter. This is the first report of heme transport in a blood-feeding organism. While the primary physiological function of the hemosome is to detoxify heme and attenuate its toxicity, we suggest that the use of this acaricide detoxification pathway by ticks may represent a new

  5. Chemistry and Molecular Dynamics Simulations of Heme b-HemQ and Coproheme-HemQ.

    Hofbauer, Stefan; Dalla Sega, Marco; Scheiblbrandner, Stefan; Jandova, Zuzana; Schaffner, Irene; Mlynek, Georg; Djinović-Carugo, Kristina; Battistuzzi, Gianantonio; Furtmüller, Paul G; Oostenbrink, Chris; Obinger, Christian

    2016-09-27

    Recently, a novel pathway for heme b biosynthesis in Gram-positive bacteria has been proposed. The final poorly understood step is catalyzed by an enzyme called HemQ and includes two decarboxylation reactions leading from coproheme to heme b. Coproheme has been suggested to act as both substrate and redox active cofactor in this reaction. In the study presented here, we focus on HemQs from Listeria monocytogenes (LmHemQ) and Staphylococcus aureus (SaHemQ) recombinantly produced as apoproteins in Escherichia coli. We demonstrate the rapid and two-phase uptake of coproheme by both apo forms and the significant differences in thermal stability of the apo forms, coproheme-HemQ and heme b-HemQ. Reduction of ferric high-spin coproheme-HemQ to the ferrous form is shown to be enthalpically favored but entropically disfavored with standard reduction potentials of -205 ± 3 mV for LmHemQ and -207 ± 3 mV for SaHemQ versus the standard hydrogen electrode at pH 7.0. Redox thermodynamics suggests the presence of a pronounced H-bonding network and restricted solvent mobility in the heme cavity. Binding of cyanide to the sixth coproheme position is monophasic but relatively slow (∼1 × 10(4) M(-1) s(-1)). On the basis of the available structures of apo-HemQ and modeling of both loaded forms, molecular dynamics simulation allowed analysis of the interaction of coproheme and heme b with the protein as well as the role of the flexibility at the proximal heme cavity and the substrate access channel for coproheme binding and heme b release. Obtained data are discussed with respect to the proposed function of HemQ in monoderm bacteria.

  6. A Heme-based Redox Sensor in the Methanogenic Archaeon Methanosarcina acetivorans*

    Molitor, Bastian; Stassen, Marc; Modi, Anuja; El-Mashtoly, Samir F.; Laurich, Christoph; Lubitz, Wolfgang; Dawson, John H.; Rother, Michael; Frankenberg-Dinkel, Nicole

    2013-01-01

    Based on a bioinformatics study, the protein MA4561 from the methanogenic archaeon Methanosarcina acetivorans was originally predicted to be a multidomain phytochrome-like photosensory kinase possibly binding open-chain tetrapyrroles. Although we were able to show that recombinantly produced and purified protein does not bind any known phytochrome chromophores, UV-visible spectroscopy revealed the presence of a heme tetrapyrrole cofactor. In contrast to many other known cytoplasmic heme-containing proteins, the heme was covalently attached via one vinyl side chain to cysteine 656 in the second GAF domain. This GAF domain by itself is sufficient for covalent attachment. Resonance Raman and magnetic circular dichroism data support a model of a six-coordinate heme species with additional features of a five-coordination structure. The heme cofactor is redox-active and able to coordinate various ligands like imidazole, dimethyl sulfide, and carbon monoxide depending on the redox state. Interestingly, the redox state of the heme cofactor has a substantial influence on autophosphorylation activity. Although reduced protein does not autophosphorylate, oxidized protein gives a strong autophosphorylation signal independent from bound external ligands. Based on its genomic localization, MA4561 is most likely a sensor kinase of a two-component system effecting regulation of the Mts system, a set of three homologous corrinoid/methyltransferase fusion protein isoforms involved in methyl sulfide metabolism. Consistent with this prediction, an M. acetivorans mutant devoid of MA4561 constitutively synthesized MtsF. On the basis of our results, we postulate a heme-based redox/dimethyl sulfide sensory function of MA4561 and propose to designate it MsmS (methyl sulfide methyltransferase-associated sensor). PMID:23661702

  7. Histidine at Position 195 is Essential for Association of Heme- b in Lcp1VH2

    Oetermann, Sylvia; Vivod, Robin; Hiessl, Sebastian; Hogeback, Jens; Holtkamp, Michael; Karst, Uwe; Steinbüchel, Alexander

    2018-05-01

    The latex clearing protein (Lcp) is the key enzyme of polyisoprene degradation in actinomycetes (Yikmis and Steinbüchel in Appl Environ Microbiol 78:4543-4551, https://doi.org/10.1128/AEM.00001-12 , 2012). In this study it was shown that Lcp from Gordonia polyisoprenivorans VH2 (Lcp1VH2) harbors a non-covalently bound heme b as cofactor, which was identified by pyridine hemochrome spectra and confirmed by LC/ESI-ToF-MS. It contains iron, most likely in the Fe3+ state. We focused on the characterization of the heme-cofactor, its accessibility with respect to the conformation of Lcp1VH2, and the identification of putative histidine residues involved in the coordination of heme. A change was detectable in UV/Vis-spectra of reduced Lcp1VH2 when imidazole was added, showing that Lcp1VH2 "as isolated" occurs in an open state, directly being accessible for external ligands. In addition, three highly conserved histidines (H195, H200 and H228), presumably acting as ligands coordinating the heme within the heme pocket, were replaced with alanines by site-directed mutagenesis. The effect of these changes on in vivo rubber-mineralization was investigated. The lcp- deletion mutant complemented with the H195A variant of lcp1 VH2 was unable to mineralize poly( cis-1,4-isoprene). In vitro analyses of purified, recombinant Lcp1VH2H195A confirmed the loss of enzyme activity, which could be ascribed to the loss of heme. Hence, H195 is essential for the association of heme- b in the central region of Lcp1VH2.

  8. Photochemical organic oxidations and dechlorinations with a mu-oxo bridged heme/non-heme diiron complex.

    Wasser, Ian M; Fry, H Christopher; Hoertz, Paul G; Meyer, Gerald J; Karlin, Kenneth D

    2004-12-27

    Steady state and laser flash photolysis studies of the heme/non-heme mu-oxo diiron complex [((6)L)Fe(III)-O-Fe(III)-Cl](+) (1) have been undertaken. The anaerobic photolysis of benzene solutions of 1 did not result in the buildup of any photoproduct. However, the addition of excess triphenylphosphine resulted in the quantitative photoreduction of 1 to [((6)L)Fe(II)...Fe(II)-Cl](+) (2), with concomitant production by oxo-transfer of 1 equiv of triphenylphosphine oxide. Under aerobic conditions and excess triphenylphosphine, the reaction produces multiple turnovers (approximately 28) before the diiron complex is degraded. The anaerobic photolysis of tetrahydrofuran (THF) or toluene solutions of 1 likewise results in the buildup of 2. The oxidation products from these reactions included gamma-butyrolactone (approximately 15%) for the reaction in THF and benzaldehyde (approximately 23%) from the reaction in toluene. In either case, the O-atom which is incorporated into the carbonyl product is derived from dioxygen present under workup or under aerobic photolysis conditions. Transient absorption measurements of low-temperature THF solutions of 1 revealed the presence of an (P)Fe(II)-like [P = tetraaryl porphyrinate dianion] species suggesting that the reactive species is a formal (heme)Fe(II)/Fe(IV)=O(non-heme) pair. The non-heme Fe(IV)=O is thus most likely responsible for C-H bond cleavage and subsequent radical chemistry. The photolysis of 1 in chlorobenzene or 1,2-dichlorobenzene resulted in C-Cl cleavage reactions and the formation of [[((6)L)Fe(III)-Cl...Fe(III)-Cl](2)O](2+) (3), with chloride ligands that are derived from solvent dehalogenation chemistry. The resulting organic products are biphenyl trichlorides or biphenyl monochlorides, derived from dichlorobenzene and chlorobenzene, respectively. Similarly, product 3 is obtained by the photolysis of benzene-benzyl chloride solutions of 1; the organic product is benzaldehyde (approximately 70%). A brief

  9. Detroit Lakes energy systems study: Phase I feasibility. Final report, February 1, 1978--July 31, 1978

    None

    1978-07-31

    The objective of the Detroit Lakes Energy Systems Study is to determine the economic feasibility of alternative renewable energy system configurations in the northern latitudes. A forecast through both 1990 and the year 2000 is made of the demand for electrical energy in the Detroit Lakes area. An assessment of renewable energy resources including biomass, wind, and insolation is provided. A detailed analysis is made of system costs including biomass, wind, solar thermal, solar photovoltaic, selected hybrids, and conventional fuel systems. Lessons learned and recommendations for prototype fabrication are highlighted. (MHR)

  10. Mononuclear non-heme iron(III)

    Home; Journals; Journal of Chemical Sciences; Volume 123; Issue 2. Mononuclear non-heme iron(III) complexes of linear and tripodal tridentate ligands as functional models for catechol dioxygenases: Effect of -alkyl substitution on regioselectivity and reaction rate. Mallayan Palaniandavar Kusalendiran Visvaganesan.

  11. Heme pathway evolution in kinetoplastid protists

    Cenci, U.; Moog, D.; Curtis, B.A.; Tanifuji, G.; Eme, L.; Lukeš, Julius; Archibald, J.M.

    2016-01-01

    Roč. 16, MAY 18 (2016), č. článku 109. ISSN 1471-2148 Institutional support: RVO:60077344 Keywords : heme * kinetoplastea * Paramoeba pemaquidensis * Perkinsela * evolution * endosymbiosis * Prokinetoplastina * lateral gene transfer Subject RIV: EB - Genetics ; Molecular Biology Impact factor: 3.221, year: 2016

  12. An ethane-bridged porphyrin dimer as a model of di-heme proteins: inorganic and bioinorganic perspectives and consequences of heme-heme interactions.

    Sil, Debangsu; Rath, Sankar Prasad

    2015-10-07

    Interaction between heme centers has been cleverly implemented by Nature in order to regulate different properties of multiheme cytochromes, thereby allowing them to perform a wide variety of functions. Our broad interest lies in unmasking the roles played by heme-heme interactions in modulating different properties viz., metal spin state, redox potential etc., of the individual heme centers using an ethane-bridged porphyrin dimer as a synthetic model of dihemes. The large differences in the structure and properties of the diheme complexes, as compared to the monoheme analogs, provide unequivocal evidence of the role played by heme-heme interactions in the dihemes. This Perspective provides a brief account of our recent efforts to explore these interesting aspects and the subsequent outcomes.

  13. Heme and erythropoieis: more than a structural role.

    Chiabrando, Deborah; Mercurio, Sonia; Tolosano, Emanuela

    2014-06-01

    Erythropoiesis is the biological process that consumes the highest amount of body iron for heme synthesis. Heme synthesis in erythroid cells is finely coordinated with that of alpha (α) and beta (β)-globin, resulting in the production of hemoglobin, a tetramer of 2α- and 2β-globin chains, and heme as the prosthetic group. Heme is not only the structural component of hemoglobin, but it plays multiple regulatory roles during the differentiation of erythroid precursors since it controls its own synthesis and regulates the expression of several erythroid-specific genes. Heme is synthesized in developing erythroid progenitors by the stage of proerythroblast, through a series of eight enzymatic reactions divided between mitochondria and cytosol. Defects of heme synthesis in the erythroid lineage result in sideroblastic anemias, characterized by microcytic anemia associated to mitochondrial iron overload, or in erythropoietic porphyrias, characterized by porphyrin deposition in erythroid cells. Here, we focus on the heme biosynthetic pathway and on human erythroid disorders due to defective heme synthesis. The regulatory role of heme during erythroid differentiation is discussed as well as the heme-mediated regulatory mechanisms that allow the orchestration of the adaptive cell response to heme deficiency. Copyright© Ferrata Storti Foundation.

  14. Coeur d'Alene Lake, Idaho: Insights Gained From Limnological Studies of 1991-92 and 2004-06

    Wood, Molly S.; Beckwith, Michael A.

    2008-01-01

    More than 100 years of mining and processing of metal-rich ores in northern Idaho's Coeur d'Alene River basin have resulted in widespread metal contamination of the basin's soil, sediment, water, and biota, including Coeur d'Alene Lake. Previous studies reported that about 85 percent of the bottom of Coeur d'Alene Lake is substantially enriched in antimony, arsenic, cadmium, copper, lead, mercury, silver, and zinc. Nutrients in the lake also are a major concern because they can change the lake's trophic status - or level of biological productivity - which could result in secondary releases of metals from contaminated lakebed sediments. This report presents insights into the limnological functioning of Coeur d'Alene Lake based on information gathered during two large-scale limnological studies conducted during calendar years 1991-92 and water years 2004-06. Both limnological studies reported that longitudinal gradients exist from north to south for decreasing water column transparency, loss of dissolved oxygen, and increasing total phosphorus concentrations. Gradients also exist for total lead, total zinc, and hypolimnetic dissolved oxygen concentrations, ranging from high concentrations in the central part of the lake to lower concentrations at the northern and southern ends of the lake. In the southern end of the lake, seasonal anoxia serves as a mechanism to release dissolved constituents such as phosphorus, nitrogen, iron, and manganese from lakebed sediments and from detrital material within the water column. Nonparametric statistical hypothesis tests at a significance level of a=0.05 were used to compare analyte concentrations among stations, between lake zones, and between study periods. The highest dissolved oxygen concentrations were measured in winter in association with minimum water temperatures, and the lowest concentrations were measured in the Coeur d'Alene Lake hypolimnion during late summer or autumn as prolonged thermal stratification restricted

  15. The Chemistry and Biochemistry of Heme c: Functional Bases for Covalent Attachment

    Bowman, Sarah E. J.; Bren, Kara L.

    2008-01-01

    A discussion of the literature concerning the synthesis, function, and activity of heme c-containing proteins is presented. Comparison of the properties of heme c, which is covalently bound to protein, is made to heme b, which is bound noncovalently. A question of interest is why nature uses biochemically expensive heme c in many proteins when its properties are expected to be similar to heme b. Considering the effects of covalent heme attachment on heme conformation and on the proximal histi...

  16. ENVIRONMENT PROTECTION AND ENVIRONMENT MONITORING ISSUES IN THE PROJECTS OF SUBGLACIAL LAKES STUDIES IN ANTARCTICA

    I. A. Alekhina

    2012-01-01

    Full Text Available Antarctic subglacial lakes can represent extreme natural habitats for microorganisms from the position of their evolution and adaptation, as well as they can contain the information on Antarctic ice sheet history and climatic changes in their sediments. Now only direct measurements and sampling from these habitats can answer on many fundamental questions. Special precaution should be complied at penetration into these unique relic environments without unfavorable impacts and contamination. A number of recommendations were developed on levels of cleanliness and sterility during direct exploration and research of subglacial environments. Documents considered in the article are the first and necessary steps for appropriate and long-term ecological management of subglacial Antarctic environments. Today there are three projects of subglacial aquatic environment research which are in preparation and realization – the Russian project of Lake Vostok, the similar British project of Lake Ellsworth and the American project on Whillans Ice Stream. The programs of ecological stewardship for direct exploration of these lakes are discussed. All these subglacial aquatic objects of further exploration and research are so various on their structure, age and regime, that only results of all programs as a whole can help to draw us a uniform picture of a subglacial ecological system. Ecological stewardship of these should provide the minimal ecological impact with maximal scientific results. On the basis of existing documents and recommendations the general approaches and the program of ecological stewardship for Lake Vostok research are discussed. Study of drilling fluid, drilling chips, Vostok ice core and the fresh frozen water will allow to make an assessment of biological and chemical contamination as a result of the first penetration and to modify the further stewardship program for the second penetration and direct exploration of lake water.

  17. Mobility of 137Cs in freshwater lakes: A mass balance and diffusion study of Lake St. Clair, Southeast Michigan, USA

    Wang, Jinlong; Baskaran, Mark; Niedermiller, John

    2017-12-01

    Cesium-137 is one of the most widely utilized anthropogenic radionuclides, both as a tracer and chronometer in the environment. Its application as an effective chronometer requires a thorough understanding of its geochemical behavior in aqueous systems. In this study, we collected and analyzed a suite of time-series water samples over a period of 8 months (April - November 2015), for particulate and dissolved 137Cs activities from a watershed in southeast Michigan, USA, using Cu2Fe(CN)6-coated cartridges developed to pre-concentrate dissolved 137Cs. We also conducted a series of laboratory experiments with the natural freshwater sediment samples and water with different chemical composition. There were seasonal variations of both particulate and dissolved 137Cs activities in the watersheds of Lake St. Clair. The distribution coefficients of 137Cs determined over a period of 8 months varied between 0.14 × 105 and 6.1 × 105 mL g-1 (mean: 2.9 × 105 mL g-1). The annual input and export flux of total 137Cs activity via rivers into and out of Lake St. Clair were calculated to be 3.6 × 1010 Bq and 1.6 × 1010 Bq, respectively. The amount of 137Cs derived by diffusion from interstitial pore water to the water column was estimated to be 0.30 × 1010 Bq (8.3% of the total input flux) which is similar to the percentage of 137Cs desorption (13%-20%) from sediment placed in oxic soft water system over a period of 30-106 days. For the same concentrations of NH4+, Mn2+, K+, Mg2+, Ca2+, Na+ and Sr2+ in a distilled water, our lab work showed that the sediment-sorbed 137Cs is displaced by ions in the order NH4+ > Mn2+ > K+ > Mg2+ ≈ Ca2+ > Na+ > Sr2+. In laboratory studies, 137Cs sorbed onto sediment was found to be less mobile in oxic soft water (Kd: 2.0 × 103 mL g-1) and more mobile in anoxic soft water (Kd: 0.2 × 103 mL g-1). In a hard water system, however, there is no significant difference in Kd values for both oxic and anoxic conditions. The sequence of Kd values is

  18. Preliminary oxygen-18 and deuterium study of the dynamics of Lake Titicaca

    Fontes, J.C.; Boulange, B.; Carmouze, J.P.; Florkowski, T.

    1979-01-01

    An oxygen-18 study of Lake Titicaca indicates good mixing from the surface down to 250 m. An attempt was made to assess the isotope mass balance which suggests that up to 7% of inflow is lost by leakage and surface outflow. Further measurements are needed for final checking of the isotope balance model. (author)

  19. Optimization of EDXRF for the study of heavy metal pollution of Lake ...

    The spectrometer was subsequently utilized to determine concentrations of heavy metals in water hyacinth (Eichhornia crassipes (Mart) Solms.) found growing along the shore of Lake Victoria. The optimal conditions and detection limits were determined experimentally by variation of the excitation parameters. The study ...

  20. Case study of a gas plant alliance at Zama Lake

    Clark, S.

    1998-01-01

    The definition of gas processing effectiveness varies according to whether a producer emphasizes maximized production, or the greatest wellhead netback, or the greatest return on investment. The producer's vision and objectives can change over time, depending on his financial needs, changes in the investment market, shareholder perceptions, or management motivation. This article describes how a third party processor like Novagas Canada Limited (NCL) can help a producer achieve his objectives. The case of NCL's Zama Lake investment and alliance with Phillips Petroleum is used to illustrate the process. Based on this example, a third party processor can provide important midstream services such as raw gas gathering, field compression, gas processing, sales gas transmission, natural gas liquids recovery, transportation and fractionation. In addition, they can provide access to associated energy industries such as oil and electricity, or any combination of the above, by structuring their services to suit the individual needs of each producer. A third party producer can also reduce risk and cost, provide increased reliability, add new processing capacity, and increased netback. Details of how the alliance between NCL and Phillips Petroleum came about and the advantages that each partner derived from the partnership are described. By entering into an alliance with NCL, Phillips Petroleum gained value by divesting risk and acquiring low cost midstream services, while NCL gained by increasing its presence and by adding economies of scale and greater flexibility in its investment decisions

  1. Feasibility study of a Great Lakes bioenergy system.

    Hacatoglu, Kevork; McLellan, P James; Layzell, David B

    2011-01-01

    A bioenergy production and delivery system built around the Great Lakes St. Lawrence Seaway (GLSLS) transportation corridor was assessed for its ability to mitigate energy security and climate change risks. The land area within 100 km of the GLSLS and associated railway lines was estimated to be capable of producing at least 30 Mt(dry) yr(-1) of lignocellulosic biomass with minimal adverse impacts on food and fibre production. This was estimated to be sufficient to displace all of the coal-fired electricity in Ontario plus more than 620 million L of green diesel (equivalent to 5.3% of diesel consumption in GLSLS provinces). Lifecycle greenhouse gas emissions were 88% and 76% lower than coal-fired power and conventional diesel, respectively. Production costs of $120 MWh(-1) for power and up to $30 GJ(-1) ($1.1 L(-1)) for green diesel were higher than current market prices, but a value for low-carbon energy would narrow the price differential. Copyright © 2010 Elsevier Ltd. All rights reserved.

  2. Proton NMR investigation of heme pocket mobility in hemoglobin via hydrogen isotope exchange kinetics

    Han, K.

    1985-01-01

    Dynamic mobility of heme cavity, the active site of Hb, was investigated by analyzing the hydrogen isotope exchange kinetics of the proximal histidyl ring NH of various kinds of Hbs with the aid of the high field Fourier Transform 1 H NMR spectroscopy. The exchange reaction occurs faster in oxy or R-state Hb than in deoxy or T-state Hb and there exists a good correlation between the oxygen affinity of Hb and the heme pocket mobility reflected in the hydrogen exchange rate. The effect of pH on the exchange is dramatically different for the two subunits of Hb A. Studying the exchange characteristics of mutant Hbs and chemically modified Hbs not only showed the existence of three well-defined localized paths for transmission of conformational changes between different heme pockets through a 1 b 2 subunit interface, but also indicated that the heme pocket mobility is regulated by the quaternary state of Hb as well as by the ligation state of Hb. Finally, the effect of the quaternary state on the heme pocket mobility is separated from that of the ligation by following the exchange reactions in Hbs where only their quaternary structure transition can be achieved without changing their ligation states by adjusting experimental conditions such as adding inositol hexaphosphate

  3. Microbially mediated redox transformations of manganese (II) along with some other trace elements: a study from Antarctic lakes

    Krishnan, K.P.; Sinha, R.K.; Krishna, K.; Nair, S.; Singh, S.M.

    a study that was conducted in the brackish water lakes in the Larsemann Hills region (east Antarctica) is presented. The rate of in situ manganese oxidation ranged from 0.04 to 3.96 ppb day sup(-1). These lakes harbor numerous manganese-oxidizing...

  4. Phosphorus limitation in Daphnia: Evidence from a long term study of three hypereutrophic Dutch lakes

    DeMott, W.R.; Gulati, R.D.

    1999-01-01

    The Loosdrecht lakes comprise three shallow, interconnected hypereutrophic lakes in The Netherlands. A lake restoration project conducted during the 1980s resulted in reduced phosphorus loading. However, no changes in phytoplankton abundance or species composition were noted, although seston

  5. Contaminants in fish tissue from US lakes and reservoirs: A national probabilistic study

    An unequal probability design was used to develop national estimates for 268 persistent, bioaccumulative, and toxic chemicals in fish tissue from lakes and reservoirs of the conterminous United States (excluding the Laurentian Great Lakes and Great Salt Lake). Predator (fillet) ...

  6. Heme exporter FLVCR1a regulates heme synthesis and degradation and controls activity of cytochromes P450.

    Vinchi, Francesca; Ingoglia, Giada; Chiabrando, Deborah; Mercurio, Sonia; Turco, Emilia; Silengo, Lorenzo; Altruda, Fiorella; Tolosano, Emanuela

    2014-05-01

    The liver has one of the highest rates of heme synthesis of any organ. More than 50% of the heme synthesized in the liver is used for synthesis of P450 enzymes, which metabolize exogenous and endogenous compounds that include natural products, hormones, drugs, and carcinogens. Feline leukemia virus subgroup C cellular receptor 1a (FLVCR1a) is plasma membrane heme exporter that is ubiquitously expressed and controls intracellular heme content in hematopoietic lineages. We investigated the role of Flvcr1a in liver function in mice. We created mice with conditional disruption of Mfsd7b, which encodes Flvcr1a, in hepatocytes (Flvcr1a(fl/fl);alb-cre mice). Mice were analyzed under basal conditions, after phenylhydrazine-induced hemolysis, and after induction of cytochromes P450 synthesis. Livers were collected and analyzed by histologic, quantitative real-time polymerase chain reaction, and immunoblot analyses. Hepatic P450 enzymatic activities were measured. Flvcr1a(fl/fl);alb-cre mice accumulated heme and iron in liver despite up-regulation of heme oxygenase 1, ferroportin, and ferritins. Hepatic heme export activity of Flvcr1a was closely associated with heme biosynthesis, which is required to sustain cytochrome induction. Upon cytochromes P450 stimulation, Flvcr1a(fl/fl);alb-cre mice had reduced cytochrome activity, associated with accumulation of heme in hepatocytes. The expansion of the cytosolic heme pool in these mice was likely responsible for the early inhibition of heme synthesis and increased degradation of heme, which reduced expression and activity of cytochromes P450. In livers of mice, Flvcr1a maintains a free heme pool that regulates heme synthesis and degradation as well as cytochromes P450 expression and activity. These findings have important implications for drug metabolism. Copyright © 2014 AGA Institute. Published by Elsevier Inc. All rights reserved.

  7. Heme Exporter FLVCR1a Regulates Heme Synthesis and Degradation and Controls Activity of Cytochromes P450

    Vinchi, Francesca; Ingoglia, Giada; Chiabrando, Deborah; Mercurio, Sonia; Turco, Emilia; Silengo, Lorenzo; Altruda, Fiorella; Tolosano, Emanuela

    2014-01-01

    Background & Aims The liver has one of the highest rates of heme synthesis of any organ. More than 50% of the heme synthesized in the liver is used for synthesis of P450 enzymes, which metabolize exogenous and endogenous compounds that include natural products, hormones, drugs, and carcinogens. Feline leukemia virus subgroup C cellular receptor 1a (FLVCR1a) is plasma membrane heme exporter that is ubiquitously expressed and controls intracellular heme content in hematopoietic lineages. We investigated the role of Flvcr1a in liver function in mice. Methods We created mice with conditional disruption of Mfsd7b, which encodes Flvcr1a, in hepatocytes (Flvcr1afl/fl;alb-cre mice). Mice were analyzed under basal conditions, after phenylhydrazine-induced hemolysis, and after induction of cytochromes P450 synthesis. Livers were collected and analyzed by histologic, quantitative real-time polymerase chain reaction, and immunoblot analyses. Hepatic P450 enzymatic activities were measured. Results Flvcr1afl/fl;alb-cre mice accumulated heme and iron in liver despite up-regulation of heme oxygenase 1, ferroportin, and ferritins. Hepatic heme export activity of Flvcr1a was closely associated with heme biosynthesis, which is required to sustain cytochrome induction. Upon cytochromes P450 stimulation, Flvcr1afl/fl;alb-cre mice had reduced cytochrome activity, associated with accumulation of heme in hepatocytes. The expansion of the cytosolic heme pool in these mice was likely responsible for the early inhibition of heme synthesis and increased degradation of heme, which reduced expression and activity of cytochromes P450. Conclusions In livers of mice, Flvcr1a maintains a free heme pool that regulates heme synthesis and degradation as well as cytochromes P450 expression and activity. These findings have important implications for drug metabolism. PMID:24486949

  8. A SIMULATION STUDY ON THE SHRUNK WETLAND AROUND QINGHAI LAKE AND REGIONAL CLIMATE

    WANG HanJie; JING Li; GAO YunXiao

    2005-01-01

    Because of the increasing concerns about global climate change, it has been known by more and more peoples that there is a close relationship between wetland and/or peatland resources and climate change. This paper presents a new methodology to study the local climate variation caused by wetland shrinking around Qinghai Lake, the largest in-land salty lake in China, by use of a regional climate model (RCM) that commonly used in climate change study. The objective focuses on the regional climate effect of the shrunk wetland coverage in recent years. The results of numerical experiment showed that if the wetland coverage around Qinhai Lake were recovered as if in early 50s of last century,the regional climate in this area could be better with more cloud covers, higher relative humidity and more precipitation. In the other word, the area of wetland reduced is one of the most important reasons that caused regional climate aridification,eco-environmental deterioration and even desertification around Qinhai Lake.

  9. Changes of glacier lakes using multi-temporal remote sensing data: A case study from India

    Kumar Rai Praveen

    2017-01-01

    Full Text Available The present study used the potential of Landsat multispectral data and ASTER-DEM data to identify the changes of glacier lakes in part of Chandra basin and surrounding of Himachal Pradesh of India from 1989 to 2013. The Barashigri, Chotashigri, Hamtahand Parvati glacier are the major glaciers within the area. The Landsat data of TM (1989 and 2009, ETM+ (2001 and OLI-TIRS (2013 sensors having different band combinations were analysed to monitor variation in the glacier lakes and area of glaciers and terminus whereas ASTER-DEM data was used for relief information. Glaciers terminus and glacial lakes were identified and mapped using false-colour composites (FCC with band combinations of red, near-infrared (NIR and shortwave infrared (SWIR, and a true-colour composite of red, green and NIR, of Landsat TM/ETM+ images and normalized difference water index (NDWI methods. It is observed that the number of lakes in the study area increased by 18.69% during the past 34 years while it was increased from 68 in 1989 to 89 in 2013. During the analysis, it is also found that the snow and glacier covered area within this period is also reduced from 1,317.39 to 1,125.59 km2.

  10. Lake responses following lanthanum-modified bentonite clay (Phoslock) application: an analysis of water column lanthanum data from 16 case study lakes

    Spears, B.M.; Lürling, M.F.L.L.W.; Yasseri, S.; Castro-Castellon, A.T.; Gibbs, M.; Meis, S.; McDonald, C.; McIntosh, J.; Sleep, D.; Oosterhout, van F.

    2013-01-01

    Phoslock is a lanthanum (La) modified bentonite clay that is being increasingly used as a geo-engineering tool for the control of legacy phosphorus (P) release from lake bed sediments to overlying waters. This study investigates the potential for negative ecological impacts from elevated La

  11. Heme oxygenase-1 accelerates tumor angiogenesis of human pancreatic cancer.

    Sunamura, Makoto; Duda, Dan G; Ghattas, Maivel H; Lozonschi, Lucian; Motoi, Fuyuhiko; Yamauchi, Jun-Ichiro; Matsuno, Seiki; Shibahara, Shigeki; Abraham, Nader G

    2003-01-01

    Angiogenesis is necessary for the continued growth of solid tumors, invasion and metastasis. Several studies clearly showed that heme oxygenase-1 (HO-1) plays an important role in angiogenesis. In this study, we used the vital microscope system, transparent skinfold model, lung colonization model and transduced pancreatic cancer cell line (Panc-1)/human heme oxygenase-1 (hHO-1) cells, to precisely analyze, for the first time, the effect of hHO-1 gene on tumor growth, angiogenesis and metastasis. Our results revealed that HO-1 stimulates angiogenesis of pancreatic carcinoma in severe combined immune deficient mice. Overexpression of human hHO-1 after its retroviral transfer into Panc-1 cells did not interfere with tumor growth in vitro. While in vivo the development of tumors was accelerated upon transfection with hHO-1. On the other hand, inhibition of heme oxygenase (HO) activity by stannous mesoporphyrin was able transiently to delay tumor growth in a dose dependent manner. Tumor angiogenesis was markedly increased in Panc-1/hHO-1 compared to mock transfected and wild type. Lectin staining and Ki-67 proliferation index confirmed these results. In addition hHO-1 stimulated in vitro tumor angiogenesis and increased endothelial cell survival. In a lung colonization model, overexpression of hHO-1 increased the occurrence of metastasis, while inhibition of HO activity by stannous mesoporphyrin completely inhibited the occurrence of metastasis. In conclusion, overexpression of HO-1 genes potentiates pancreatic cancer aggressiveness, by increasing tumor growth, angiogenesis and metastasis and that the inhibition of the HO system may be of useful benefit for the future treatment of the disease.

  12. Analysis of ERS 1 synthetic aperture radar data of frozen lakes in northern Montana and implications for climate studies

    Hall, Dorothy K.; Fagre, Daniel B.; Klasner, Fritz; Linebaugh, Gregg; Liston, Glen E.

    1994-01-01

    Lakes that freeze each winter are good indicators of regional climate change if key parameters, such as freeze-up and breakup date and maximum ice thickness, are measured over a decade-scale time frame. Synthetic aperture radar (SAR) satellite data have proven to be especially useful for measurement of climatologically significant parameters characteristic of frozen lakes. In this paper, five lakes in Glacier National Park, Montana, have been studied both in the field and using Earth Remote-Sensing Satellite (ERS) 1 SAR data during the 1992-1993 winter. The lakes are characterized by clear ice, sometimes with tubular or rounded bubbles, and often with a layer of snow ice on top of the clear ice. They are also often snow covered. Freeze-up is detected quite easily using ERS 1 SAR data as soon as a thin layer of ice forms. The effect of snow ice on the backscatter is thought to be significant but is, as yet, undetermined. On the five lakes studied, relative backscatter was found to increase with ice thickness until a maximum was reached in February. Breakup, an often ill-defined occurrence, is difficult to detect because surface water causes the SAR signal to be absorbed, thus masking the ice below. Comparison of the bubble structure of thaw lakes in northern Alaska with lakes in northern Montana has shown that the ice structure is quite different, and this difference may contribute to differential SAR signature evolution in the lakes of the two areas.

  13. Isotopic study of mercury sources and transfer between a freshwater lake and adjacent forest food web

    Kwon, Sae Yun; Blum, Joel D.; Nadelhoffer, Knute J.; Timothy Dvonch, J.; Tsui, Martin Tsz-Ki

    2015-01-01

    Studies of monomethylmercury (MMHg) sources and biogeochemical pathways have been extensive in aquatic ecosystems, but limited in forest ecosystems. Increasing evidence suggests that there is significant mercury (Hg) exchange between aquatic and forest ecosystems. We use Hg stable isotope ratios (δ 202 Hg and Δ 199 Hg) to investigate the relative importance of MMHg sources and assess Hg transfer pathways between Douglas Lake and adjacent forests located at the University of Michigan Biological Station, USA. We characterize Hg isotopic compositions of basal resources and use linear regression of % MMHg versus δ 202 Hg and Δ 199 Hg to estimate Hg isotope values for inorganic mercury (IHg) and MMHg in the aquatic and adjacent forest food webs. In the aquatic ecosystem, we found that lake sediment represents a mixture of IHg pools deposited via watershed runoff and precipitation. The δ 202 Hg and Δ 199 Hg values estimated for IHg are consistent with other studies that measured forest floor in temperate forests. The Δ 199 Hg value estimated for MMHg in the aquatic food web indicates that MMHg is subjected to ~ 20% photochemical degradation prior to bioaccumulation. In the forest ecosystem, we found a significant negative relationship between total Hg and δ 202 Hg and Δ 199 Hg of soil collected at multiple distances from the lakeshore and lake sediment. This suggests that IHg input from watershed runoff provides an important Hg transfer pathway between the forest and aquatic ecosystems. We measured Δ 199 Hg values for high trophic level insects and compared these insects at multiple distances perpendicular to the lake shoreline. The Δ 199 Hg values correspond to the % canopy cover suggesting that forest MMHg is subjected to varying extents of photochemical degradation and the extent may be controlled by sunlight. Our study demonstrates that the use of Hg isotopes adds important new insight into the relative importance of MMHg sources and complex Hg transfer

  14. Isotopic study of mercury sources and transfer between a freshwater lake and adjacent forest food web

    Kwon, Sae Yun, E-mail: saeyunk@umich.edu [Department of Earth and Environmental Sciences, University of Michigan, 1100 N. University Ave, Ann Arbor, MI 48109 (United States); Blum, Joel D. [Department of Earth and Environmental Sciences, University of Michigan, 1100 N. University Ave, Ann Arbor, MI 48109 (United States); Department of Ecology and Evolutionary Biology, University of Michigan, 830 N. University Ave, Ann Arbor, MI 48109 (United States); Nadelhoffer, Knute J. [Department of Ecology and Evolutionary Biology, University of Michigan, 830 N. University Ave, Ann Arbor, MI 48109 (United States); Timothy Dvonch, J. [Department of Environmental Health Sciences, University of Michigan, 1415 Washington Heights, Ann Arbor, MI 48109 (United States); Tsui, Martin Tsz-Ki [Department of Biology, University of North Carolina at Greensboro, 321 McIver Street, Greensboro, NC 27402 (United States)

    2015-11-01

    Studies of monomethylmercury (MMHg) sources and biogeochemical pathways have been extensive in aquatic ecosystems, but limited in forest ecosystems. Increasing evidence suggests that there is significant mercury (Hg) exchange between aquatic and forest ecosystems. We use Hg stable isotope ratios (δ{sup 202}Hg and Δ{sup 199}Hg) to investigate the relative importance of MMHg sources and assess Hg transfer pathways between Douglas Lake and adjacent forests located at the University of Michigan Biological Station, USA. We characterize Hg isotopic compositions of basal resources and use linear regression of % MMHg versus δ{sup 202}Hg and Δ{sup 199}Hg to estimate Hg isotope values for inorganic mercury (IHg) and MMHg in the aquatic and adjacent forest food webs. In the aquatic ecosystem, we found that lake sediment represents a mixture of IHg pools deposited via watershed runoff and precipitation. The δ{sup 202}Hg and Δ{sup 199}Hg values estimated for IHg are consistent with other studies that measured forest floor in temperate forests. The Δ{sup 199}Hg value estimated for MMHg in the aquatic food web indicates that MMHg is subjected to ~ 20% photochemical degradation prior to bioaccumulation. In the forest ecosystem, we found a significant negative relationship between total Hg and δ{sup 202}Hg and Δ{sup 199}Hg of soil collected at multiple distances from the lakeshore and lake sediment. This suggests that IHg input from watershed runoff provides an important Hg transfer pathway between the forest and aquatic ecosystems. We measured Δ{sup 199}Hg values for high trophic level insects and compared these insects at multiple distances perpendicular to the lake shoreline. The Δ{sup 199}Hg values correspond to the % canopy cover suggesting that forest MMHg is subjected to varying extents of photochemical degradation and the extent may be controlled by sunlight. Our study demonstrates that the use of Hg isotopes adds important new insight into the relative

  15. Single or functionalized fullerenes interacting with heme group

    Costa, Wallison Chaves; Diniz, Eduardo Moraes, E-mail: eduardo.diniz@ufma.br [Departamento de Física, Universidade Federal do Maranhão, Avenida dos Portugueses, 1966, CEP 65080-805, São Luís - MA (Brazil)

    2014-09-15

    The heme group is responsible for iron transportation through the bloodstream, where iron participates in redox reactions, electron transfer, gases detection etc. The efficiency of such processes can be reduced if the whole heme molecule or even the iron is somehow altered from its original oxidation state, which can be caused by interactions with nanoparticles as fullerenes. To verify how such particles alter the geometry and electronic structure of heme molecule, here we report first principles calculations based on density functional theory of heme group interacting with single C{sub 60} fullerene or with C{sub 60} functionalized with small functional groups (−CH{sub 3}, −COOH, −NH{sub 2}, −OH). The calculations shown that the system heme + nanoparticle has a different spin state in comparison with heme group if the fullerene is functionalized. Also a functional group can provide a stronger binding between nanoparticle and heme molecule or inhibit the chemical bonding in comparison with single fullerene results. In addition heme molecule loses electrons to the nanoparticles and some systems exhibited a geometry distortion in heme group, depending on the binding energy. Furthermore, one find that such nanoparticles induce a formation of spin up states in heme group. Moreover, there exist modifications in density of states near the Fermi energy. Although of such changes in heme electronic structure and geometry, the iron atom remains in the heme group with the same oxidation state, so that processes that involve the iron might not be affected, only those that depend on the whole heme molecule.

  16. THE PRELIMINARY STUDY ON LANDSCAPE CULTURE ORIENTATION AND EXPLOITATION OF THE SOUTH DONGTING LAKE WETLAND

    2002-01-01

    Dongting Lake is internationally an important wetland. We studied and summarized the conception, function, classification and current situation of the wetland-landscape culture in this region. The results showed that the culture of Dongting Lake wetland was rich in diversity, which are the Rice Cultivation Culture, high-balustrade dwelling,Nuo Culture, Ship Culture, Dragon Boat Culture, Chu Culture, Ancient Architecture Landscape, Wetland Foodstuff andCuisine Culture, Civil Art, Historic Heritage and Cultural Relics, Revolutionary Sites and Ruins, and Production andLiving Culture, etc. We also evaluated the eeo-tourism value of wetland landscape culture, and analyzed its features andorientation. The results revealed that the south Dongting Lake wetland plays a key role on the Changjiang(Yangtze) Riverreaches civilization and Chinese civilization, even has great influence on the global civilization. We summarized that thesoul of the south Dongting Lake Culture was Wetland Culture, Water Culture, Rice Cultivation and Chu Culture. Thethoughts, principles and approaches of sustainable exploitation and utilization of the wetland landscape culture were formulated and suggested.

  17. Lead isotope ratios as a tracer for lead contamination sources: A lake Andong case study

    Kim Y. H

    2013-04-01

    Full Text Available The objective of this study was to evaluate stable Pb isotope signatures as a tracer for Pb contamination in Lake Andong. For Pb isotope analysis, we collected water and sediment from Lake Andong, particles in the air, soils, and stream water, mine tailings, sludge and wastewater from zinc smelting around lake Andong watershed. The results showed that Pb isotope ratios (206Pb/204Pb, 207Pb/204Pb, and 208Pb/204Pb for zinc concentrate were 18.809 ± 0.322, 15.650 ± 0.062, and 38.728 ± 0.421, respectively. In wastewater, isotopic ratio values (206Pb/204Pb, 207Pb/204Pb, and 208Pb/204Pb were 17.363 ± 0.133, 15.550 ± 0.025, and 37.217 ± 0.092, respectively. Additionally, isotopic ratio values (206Pb/204Pb, 207Pb/204Pb, and 208Pb/204Pb for sludge were 17.515 ± 0.155, 15.537 ± 0.018, and 37.357 ± 0.173, respectively. These values were similar to those in zinc and lead concentrate originated from Canada and South America. In contrast, Pb isotope ratios of soil, tailings and sediment from Lake Andong were similar to those of Korean ore. Atmospheric particles showed different patterns of Pb isotope ratios from sediments, soils, and zinc smelting and this needs further investigation in order to identify atmospheric Pb sources.

  18. Voltammetry and In Situ Scanning Tunnelling Microscopy of De Novo Designed Heme Protein Monolayers on Au(111)-Electrode Surfaces

    Albrecht, Tim; Li, Wu; Haehnel, Wolfgang

    2006-01-01

    to the tunnelling current, apparently due to slow electron transfer kinetics. As a consequence, STM images of heme-containing and heme-free MOP-C did not reveal any notable differences in apparent height or physical extension. The apparent height of heme-containing MOP-C did not show any dependence on the substrate...... potential being varied around the redox potential of the protein. The mere presence of an accessible molecular energy level is not sufficient to result in detectable tunnelling current modulation. (c) 2006 Elsevier B.V. All rights reserved.......In the present work, we report the electrochemical characterization and in situ scanning tunnelling microscopy (STM) studies of monolayers of an artificial de novo designed heme protein MOP-C, covalently immobilized on modified Au(111) surfaces. The protein forms closely packed monolayers, which...

  19. Heme biomolecule as redox mediator and oxygen shuttle for efficient charging of lithium-oxygen batteries

    Ryu, Won-Hee; Gittleson, Forrest S.; Thomsen, Julianne M.; Li, Jinyang; Schwab, Mark J.; Brudvig, Gary W.; Taylor, André D.

    2016-01-01

    One of the greatest challenges with lithium-oxygen batteries involves identifying catalysts that facilitate the growth and evolution of cathode species on an oxygen electrode. Heterogeneous solid catalysts cannot adequately address the problematic overpotentials when the surfaces become passivated. However, there exists a class of biomolecules which have been designed by nature to guide complex solution-based oxygen chemistries. Here, we show that the heme molecule, a common porphyrin cofactor in blood, can function as a soluble redox catalyst and oxygen shuttle for efficient oxygen evolution in non-aqueous Li-O2 batteries. The heme's oxygen binding capability facilitates battery recharge by accepting and releasing dissociated oxygen species while benefiting charge transfer with the cathode. We reveal the chemical change of heme redox molecules where synergy exists with the electrolyte species. This study brings focus to the rational design of solution-based catalysts and suggests a sustainable cross-link between biomolecules and advanced energy storage. PMID:27759005

  20. Pilot-scale tests of HEME and HEPA dissolution process

    Qureshi, Z.H.; Strege, D.K.

    1994-06-01

    A series of pilot-scale demonstration tests for the dissolution of High Efficiency Mist Eliminators (HEME`s) and High Efficiency Particulate Airfilters (HEPA) were performed on a 1/5th linear scale. These fiberglass filters are to be used in the Defense Waste Processing Facility (DWPF) to decontaminate the effluents from the off-gases generated during the feed preparation process and vitrification. When removed, these filters will be dissolved in the Decontamination Waste Treatment Tank (DWTT) using 5 wt% NaOH solution. The contaminated fiberglass is converted to an aqueous stream which will be transferred to the waste tanks. The filter metal structure will be rinsed with process water before its disposal as low-level solid waste. The pilot-scale study reported here successfully demonstrated a simple one step process using 5 wt% NaOH solution. The proposed process requires the installation of a new water spray ring with 30 nozzles. In addition to the reduced waste generated, the total process time is reduced to 48 hours only (66% saving in time). The pilot-scale tests clearly demonstrated that the dissolution process of HEMEs has two stages - chemical digestion of the filter and mechanical erosion of the digested filter. The digestion is achieved by a boiling 5 wt% caustic solutions, whereas the mechanical break down of the digested filter is successfully achieved by spraying process water on the digested filter. An alternate method of breaking down the digested filter by increased air sparging of the solution was found to be marginally successful are best. The pilot-scale tests also demonstrated that the products of dissolution are easily pumpable by a centrifugal pump.

  1. Fluvial sediment study of Fishtrap and Dewey Lakes drainage basins, Kentucky - Virginia

    Curtis, William F.; Flint, Russell F.; George, Frederick H.; Santos, John F.

    1978-01-01

    Fourteen drainage basins above Fishtrap and Dewey Lakes in the Levisa Fork and Johns Creek drainage basins of eastern Kentucky and southwestern Virginia were studied to determine sedimentation rates and origin of sediment entering the two lakes. The basins ranged in size from 1.68 to 297 square miles. Sediment yields ranged from 2,890 to 21,000 tons per square mile where surface-mining techniques predominated, and from 732 to 3 ,470 tons per square mile where underground mining methods predominated. Yields, in terms of tons per acre-foot of runoff, ranged from 2.2 to 15 for surface-mined areas, and from 0.5 to 2.7 for underground-mined areas. Water and sediment discharges from direct runoff during storms were compared for selected surface-mined and underground-mined areas. Data points of two extensively surface-mined areas, one from the current project and one from a previous project in Beaver Creek basin, McCreary County, Kentucky, grouped similarly in magnitude and by season. Disturbed areas from mining activities determined from aerial photographs reached 17 percent in one study area where extensive surface mining was being practiced. For most areas where underground mining was practiced, percentage disturbed area was almost negligible. Trap efficiency of Fishtrap Lake was 89 percent, and was 62 percent for Dewey Lake. Average annual deposition rates were 464 and 146 acre-feet for Fishtrap and Dewey Lakes, respectively. The chemical quality of water in the Levisa Fork basin has been altered by man 's activities. (Woodard-USGS)

  2. Valuation of provisional and cultural services of a Ramsar site: A preliminary study on Rudrasagar lake, India

    Moitree Taran

    2017-01-01

    Full Text Available Rudrasagar lake, a Ramsar site in India offers a variety of ecosystem services. The contribution of Rudrasagar lake to the society has not been estimated so far. The preliminary study aims to provide an economic valuation of the provisional and cultural services of the Rudrasagar lake. Official records of revenue collected by the Tourism Department of Tripura and a socio- economic survey was the source of information used in the economic valuation of the lake. The main provisional services provided by the lake are food (aquatic plants and fishes, fuel wood and timber whereas, the cultural services provided were boat raiding and tourism due to its historical importance. The provisioning and cultural services provided by the Rudrasagar lake are 40810 US$ and 33929.33 US$ per year respectively during the period of 2010-2015. The main threats to the wetland identified are increasing silt loads due to deforestation, expansion of agricultural land and land conversion due to population pressure. To alleviate the anthropogenic stress on the lake, better monitoring, planning and management are essential. By proper conservation and management it will be possible to enjoy the provisional and cultural services of the lake in a sustainable way.

  3. Lake responses following lanthanum-modified bentonite clay (Phoslock®) application: an analysis of water column lanthanum data from 16 case study lakes.

    Spears, Bryan M; Lürling, Miquel; Yasseri, Said; Castro-Castellon, Ana T; Gibbs, Max; Meis, Sebastian; McDonald, Claire; McIntosh, John; Sleep, Darren; Van Oosterhout, Frank

    2013-10-01

    Phoslock(®) is a lanthanum (La) modified bentonite clay that is being increasingly used as a geo-engineering tool for the control of legacy phosphorus (P) release from lake bed sediments to overlying waters. This study investigates the potential for negative ecological impacts from elevated La concentrations associated with the use of Phoslock(®) across 16 case study lakes. Impact-recovery trajectories associated with total lanthanum (TLa) and filterable La (FLa) concentrations in surface and bottom waters were quantified over a period of up to 60 months following Phoslock(®) application. Both surface and bottom water TLa and FLa concentrations were 0.8 mEq L(-1)), but higher (up to 0.12 mg L(-1)) in lakes characterised by very low alkalinity. The effects of elevated La(3+) concentrations following Phoslock(®) applications in lakes of very low alkalinity requires further evaluation. The implications for the use of Phoslock(®) in eutrophication management are discussed. Copyright © 2013 Elsevier Ltd. All rights reserved.

  4. Regional groundwater-flow model of the Lake Michigan Basin in support of Great Lakes Basin water availability and use studies

    Feinstein, D.T.; Hunt, R.J.; Reeves, H.W.

    2010-01-01

    . Lastly, it describes several categories of limitations and discusses ways of extending the regional model to address issues at the local scale. Results of the simulations portray a regional groundwater-flow system that, over time, has largely maintained its natural predevelopment configuration but that locally has been strongly affected by well withdrawals. The quantity of rainfall in the Lake Michigan Basin and adjacent areas supports a dense surface-water network and recharge rates consistent with generally shallow water tables and predominantly shallow groundwater flow. At the regional scale, pumping has not caused major modifications of the shallow flow system, but it has resulted in decreases in base flow to streams and in direct discharge to Lake Michigan (about 2 percent of the groundwater discharged and about 0.5 cubic foot per second per mile of shoreline). On the other hand, well withdrawals have caused major reversals in regional flow patterns around pumping centers in deep, confined aquifers - most noticeably in the Cambrian-Ordovician aquifer system on the west side of Lake Michigan near the cities of Green Bay and Milwaukee in eastern Wisconsin, and around Chicago in northeastern Illinois, as well as in some shallow bedrock aquifers (for example, in the Marshall aquifer near Lansing, Mich.). The reversals in flow have been accompanied by large drawdowns with consequent local decrease in storage. On the west side of Lake Michigan, groundwater withdrawals have caused appreciable migration of the deep groundwater divides. Before the advent of pumping, the deep Lake Michigan groundwater-basin boundaries extended west of the Lake Michigan surface-water basin boundary, in some places by tens of miles. Over time, the pumping centers have replaced Lake Michigan as the regional sink for the deep flow system. The regional model is intended to support the framework pilot study of water availability and use for the Great Lakes Basin (Reeves, in press).

  5. Heme iron content in lamb meat is differentially altered upon boiling, grilling, or frying as assessed by four distinct analytical methods.

    Pourkhalili, Azin; Mirlohi, Maryam; Rahimi, Ebrahim

    2013-01-01

    Lamb meat is regarded as an important source of highly bioavailable iron (heme iron) in the Iranians diet. The main objective of this study is to evaluate the effect of traditional cooking methods on the iron changes in lamb meat. Four published experimental methods for the determination of heme iron were assessed analytically and statistically. Samples were selected from lambs' loin. Standard methods (AOAC) were used for proximate analysis. For measuring heme iron, the results of four experimental methods were compared regarding their compliance to Ferrozine method which was used for the determination of nonheme iron. Among three cooking methods, the lowest total iron and heme iron were found in boiling method. The heme iron proportions to the total iron in raw, boiled lamb meat and grilled, were counted as 65.70%, 67.75%, and 76.01%, receptively. Measuring the heme iron, the comparison of the methods in use showed that the method in which heme extraction solution was composed of 90% acetone, 18% water, and 2% hydrochloric acid was more appropriate and more correlated with the heme iron content calculated by the difference between total iron and nonheme iron.

  6. Heme Iron Content in Lamb Meat Is Differentially Altered upon Boiling, Grilling, or Frying as Assessed by Four Distinct Analytical Methods

    Azin Pourkhalili

    2013-01-01

    Full Text Available Lamb meat is regarded as an important source of highly bioavailable iron (heme iron in the Iranians diet. The main objective of this study is to evaluate the effect of traditional cooking methods on the iron changes in lamb meat. Four published experimental methods for the determination of heme iron were assessed analytically and statistically. Samples were selected from lambs' loin. Standard methods (AOAC were used for proximate analysis. For measuring heme iron, the results of four experimental methods were compared regarding their compliance to Ferrozine method which was used for the determination of nonheme iron. Among three cooking methods, the lowest total iron and heme iron were found in boiling method. The heme iron proportions to the total iron in raw, boiled lamb meat and grilled, were counted as 65.70%, 67.75%, and 76.01%, receptively. Measuring the heme iron, the comparison of the methods in use showed that the method in which heme extraction solution was composed of 90% acetone, 18% water, and 2% hydrochloric acid was more appropriate and more correlated with the heme iron content calculated by the difference between total iron and nonheme iron.

  7. Optical dating of fluvio-deltaic clastic lake-fill sediments - A feasibility study in the Holocene Rhine delta (western Netherlands)

    Wallinga, J.; Bos, I.J.

    2010-01-01

    We test the applicability of quartz optically stimulated luminescence (OSL) dating on clastic lake sediments to investigate whether this dating method can be applied to study the timing and rate of deposition in Holocene fluvio-deltaic lakes. Our study concerns the filling of a lake by the

  8. Interactions between 4-aminoquinoline and heme: Promising mechanism against Trypanosoma cruzi

    Guilherme Curty Lechuga

    2016-12-01

    Full Text Available Chagas disease is a neglected tropical disease caused by the flagellated protozoan Trypanosoma cruzi. The current drugs used to treat this disease have limited efficacy and produce severe side effects. Quinolines, nitrogen heterocycle compounds that form complexes with heme, have a broad spectrum of antiprotozoal activity and are a promising class of new compounds for Chagas disease chemotherapy. In this study, we evaluated the activity of a series of 4-arylaminoquinoline-3-carbonitrile derivatives against all forms of Trypanosoma cruzi in vitro. Compound 1g showed promising activity against epimastigote forms when combined with hemin (IC50<1 μM, with better performance than benznidazole, the reference drug. This compound also inhibited the viability of trypomastigotes and intracellular amastigotes. The potency of 1g in combination with heme was enhanced against epimastigotes and trypomastigotes, suggesting a similar mechanism of action that occurs in Plasmodium spp. The addition of hemin to the culture medium increased trypanocidal activity of analog 1g without changing the cytotoxicity of the host cell, reaching an IC50 of 11.7 μM for trypomastigotes. The mechanism of action was demonstrated by the interaction of compound 1g with hemin in solution and prevention of heme peroxidation. Compound 1g and heme treatment induced alterations of the mitochondrion-kinetoplast complex in epimastigotes and trypomastigotes and also, accumulation of electron-dense deposits in amastigotes as visualized by transmission electron microscopy. The trypanocidal activity of 4-aminoquinolines and the elucidation of the mechanism involving interaction with heme is a neglected field of research, given the parasite's lack of heme biosynthetic pathway and the importance of this cofactor for parasite survival and growth. The results of this study can improve and guide rational drug development and combination treatment strategies.

  9. Interactions between 4-aminoquinoline and heme: Promising mechanism against Trypanosoma cruzi.

    Lechuga, Guilherme Curty; Borges, Júlio Cesar; Calvet, Claudia Magalhães; de Araújo, Humberto Pinheiro; Zuma, Aline Araujo; do Nascimento, Samara Braga; Motta, Maria Cristina Machado; Bernardino, Alice Maria Rolim; Pereira, Mirian Claudia de Souza; Bourguignon, Saulo Cabral

    2016-12-01

    Chagas disease is a neglected tropical disease caused by the flagellated protozoan Trypanosoma cruzi. The current drugs used to treat this disease have limited efficacy and produce severe side effects. Quinolines, nitrogen heterocycle compounds that form complexes with heme, have a broad spectrum of antiprotozoal activity and are a promising class of new compounds for Chagas disease chemotherapy. In this study, we evaluated the activity of a series of 4-arylaminoquinoline-3-carbonitrile derivatives against all forms of Trypanosoma cruzi in vitro. Compound 1g showed promising activity against epimastigote forms when combined with hemin (IC50<1 μM), with better performance than benznidazole, the reference drug. This compound also inhibited the viability of trypomastigotes and intracellular amastigotes. The potency of 1g in combination with heme was enhanced against epimastigotes and trypomastigotes, suggesting a similar mechanism of action that occurs in Plasmodium spp. The addition of hemin to the culture medium increased trypanocidal activity of analog 1g without changing the cytotoxicity of the host cell, reaching an IC50 of 11.7 μM for trypomastigotes. The mechanism of action was demonstrated by the interaction of compound 1g with hemin in solution and prevention of heme peroxidation. Compound 1g and heme treatment induced alterations of the mitochondrion-kinetoplast complex in epimastigotes and trypomastigotes and also, accumulation of electron-dense deposits in amastigotes as visualized by transmission electron microscopy. The trypanocidal activity of 4-aminoquinolines and the elucidation of the mechanism involving interaction with heme is a neglected field of research, given the parasite's lack of heme biosynthetic pathway and the importance of this cofactor for parasite survival and growth. The results of this study can improve and guide rational drug development and combination treatment strategies. Copyright © 2016 The Authors. Published by Elsevier

  10. Relationship of Heme Oxygenase-1 (HO-1 Level with Onset and Severity in Normotensive Pregnancy and Severe Preeclampsia

    John Johannes Wantania

    2016-08-01

    Full Text Available Background: Preeclampsia still becomes a major problem in pregnancies. Various evidences showed that heme oxygenase-1 (HO-1 is very important in pregnancy. This study aims to understand the relationship of heme oxygenase-1 level with onset and severity in normotensive pregnancy and severe preeclampsia. Methods: This is a cross sectional analytic comparative study, the subjects consisted of 26 patients with normotensive pregnancies and 26 patients with severe preeclampsia. Blood samples from women with < 34 / ≥ 34 weeks’ normotensive pregnancies and women with severe preeclampsia were taken. HO-1 ELISA kit used to quantitate heme oxygenase-1 level in samples. Results: The level of heme oxygenase-1 in normotensive pregnant women < 34 weeks lower than severe preeclampsia pregnant women < 34 weeks (3.28 ± 0.46 ng/mL vs 4.20 ± 0.64 ng/mL, p=0.003, respectively. The median level of heme oxygenase-1 in normotensive pregnant women ≥ 34 weeks was 2.96 (2.41–4.39 ng/mL, while severe preeclampsia pregnant women ≥ 34 weeks was 3.52 (2.88–5.43 ng/mL, (p=0.040. The median level of heme oxygenase-1 in normotensive pregnant women was 3.04 (2.41–4.39 ng/mL, while severe preeclampsia pregnant women was 3.68 (2.88–5.67 ng/mL, (p=0.001. Conclusions: There is correlation between the incidence of severe preeclampsia with heme oxygenase-1 level in < 34 and ≥ 34 weeks of pregnancy. There is a significant difference between the level of heme oxygenase-1 in pregnant women with severe preeclampsia and in women with normotensive pregnancy. 

  11. Resilience of alternative stable states during the recovery of shallow lakes from eutrophication: Lake Veluwe as a case study

    Ibelings, B.W.; Portielje, R.; Lammens, E.H.R.R.; Meijer, M.L.; Noordhuis, R.; van den Berg, Marcel S.; Joosse, W.; Scheffer, M.

    2007-01-01

    In this paper we analyze a long-term dataset on the recovery from eutrophication of Lake Veluwe (The Netherlands). Clear hysteresis was observed in a number of ecosystem variables: the route to recovery differed significantly from the route that led to loss of clear water. The macrophyte dominated

  12. Biosynthesis of heme in immature erythroid cells. The regulatory step for heme formation in the human erythron

    Gardner, L.C.; Cox, T.M.

    1988-01-01

    Heme formation in reticulocytes from rabbits and rodents is subject to end product negative feedback regulation: intracellular free heme has been shown to control acquisition of transferrin iron for heme synthesis. To identify the site of control of heme biosynthesis in the human erythron, immature erythroid cells were obtained from peripheral blood and aspirated bone marrow. After incubation with human 59Fe transferrin, 2-[14C]glycine, or 4-[14C]delta-aminolevulinate, isotopic incorporation into extracted heme was determined. Addition of cycloheximide to increase endogenous free heme, reduced incorporation of labeled glycine and iron but not delta-aminolevulinate into cell heme. Incorporation of glycine and iron was also sensitive to inhibition by exogenous hematin (Ki, 30 and 45 microM, respectively) i.e. at concentrations in the range which affect cell-free protein synthesis in reticulocyte lysates. Hematin treatment rapidly diminished incorporation of intracellular 59Fe into heme by human erythroid cells but assimilation of 4-[14C]delta-aminolevulinate into heme was insensitive to inhibition by hematin (Ki greater than 100 microM). In human reticulocytes (unlike those from rabbits), addition of ferric salicylaldehyde isonicotinoylhydrazone, to increase the pre-heme iron pool independently of the transferrin cycle, failed to promote heme synthesis or modify feedback inhibition induced by hematin. In human erythroid cells (but not rabbit reticulocytes) pre-incubation with unlabeled delta-aminolevulinate or protoporphyrin IX greatly stimulated utilization of cell 59Fe for heme synthesis and also attenuated end product inhibition. In human erythroid cells heme biosynthesis is thus primarily regulated by feedback inhibition at one or more steps which lead to delta-aminolevulinate formation

  13. Effect of lead on heme synthesis

    Neuberger, A.

    1975-01-01

    Recently, a fair amount of work has been done on the effect of lead on porphobilinogen dehydratase, which has been used as a sensitive indicator of lead poisoning. How far this is in itself harmful depends on the Michaelis constants of both the aminolaevulinic synthetase and of the dehydratase, and in addition on the relative activities of the two enzymes in a cell and also on the tissue concentration of glycine. Information on some of these points is still fragmentary, and a reliable judgement is at the present not very easy. Another step in the heme synthesis, which is sensitive to low concentrations of lead, is the incorporation of iron into protoporphyrin. Inhibition of this step may be important in accounting to a large extent for the anaemia found in individuals with lead poisoning. Reduction in the tissue concentration of heme or of heme-like compounds may also explain, through the mechanism of de-repression, the excretion of increased amounts of aminolaevulinic acid in the urine observed in cases of lead poisoning. A third step in heme synthesis, which might be sensitive to lead, is the oxidative decarboxylation of coproporphyrin to protoporphyrin, and this may explain why the former derivative is excreted in the urine. Recent work of the Harvard Medical School has indicated that greatly reduced levels of ALA dehydratase may be found in most cases of severe liver damage due to alcoholism. In most of these cases the level of lead in the blood is within normal limits, and there is no history of exposure to toxic amounts of lead. We therefore have to assume that a reduction in the blood level of this enzyme is not necessarily an indication of lead poisoning.

  14. The Cottonwood Lake study area, a long-term wetland ecosystem monitoring site

    Mushet, David M.; Euliss, Ned H.

    2012-01-01

    The Cottonwood Lake study area is one of only three long-term wetland ecosystem monitoring sites in the prairie pothole region of North America; the other two are Orchid Meadows in South Dakota and St. Denis in Saskatchewan. Of the three, Cottonwood Lake has, by far, the longest continuous data-collection record. Research was initiated at the study area in 1966, and intensive investigations of the hydrology, chemistry, and biology of prairie pothole wetlands continue at the site today. This fact sheet describes the study area, provides an overview of wetland ecology research that has been conducted at the site in the past, and provides an introduction to current work being conducted at the study area by USGS scientists.

  15. Geochemical studies of backfill aggregates, lake sediment cores and the Hueco Bolson Aquifer

    Thapalia, Anita

    This dissertation comprises of three different researches that focuses on the application of geochemistry from aggregates, lake sediment cores and Hueco Bolson Aquifer. Each study is independent and presented in the publication format. The first chapter is already published and the second chapter is in revision phase. Overall, three studies measure the large scale (field) as well as bench scale (lab) water-rock interactions influenced by the climatic and anthropogenic factors spans from the field of environmental geology to civil engineering. The first chapter of this dissertation addresses the chemical evaluation of coarse aggregates from six different quarries in Texas. The goal of this work is to find out the best geochemical methods for assessing the corrosion potential of coarse aggregates prior to their use in mechanically stabilized earth walls. Electrochemical parameters help to define the corrosion potential of aggregates following two different leaching protocols. Testing the coarse and fine aggregates demonstrate the chemical difference due to size-related kinetic leaching effects. Field fines also show different chemistry than the bulk rock indicating the weathering impact on carbonate rocks. The second chapter investigates zinc (Zn) isotopic signatures from eight lake sediment cores collected both from pristine lakes and those impacted by urban anthropogenic contamination. Zinc from the natural weathering of rocks and anthropogenic atmospheric pollutants are transported to these lakes and the signatures are recorded in the sediments. Isotopic analysis of core samples provides the signature of anthropogenic contamination sources. Dated sediment core and isotopic analysis can identify Zn inputs that are correlated to the landuse and population change of the watersheds. Comparison of isotopic data from both pristine and urban lake sediment core also serves as an analog in other lake sediment cores in the world. The third chapter studies on Hueco Bolson

  16. Heme-based sensors in biological systems.

    Rodgers, K R

    1999-04-01

    The past several years have been witness to a staggering rate of advancement in the understanding of how organisms respond to changes in the availability of diatomic molecules that are toxic and/or crucial to survival. Heme-based sensors presently constitute the majority of the proteins known to sense NO, O2 and CO and to initiate the chemistry required to adapt to changes in their availabilities. Knowledge of the three characterized members of this class, soluble guanylate cyclase, FixL and CooA, has grown substantially during the past year. The major advances have resulted from a broad range of approaches to elucidation of both function and mechanism. They include growth in the understanding of the interplay between the heme and protein in soluble guanylate cyclase, as well as alternate means for its stimulation. Insight into the O2-induced structural changes in FixL has been supplied by the single crystal structure of the heme domain of Bradyrhizobium japonicum. Finally, the ligation environment and ligand interchange that facilitates CO sensing by CooA has been established by spectroscopic and mutagenesis techniques.

  17. Lake Afdera: a threatened saline lake in Ethiopia | Getahun | SINET ...

    Lake Afdera is a saline lake located in the Afar region, Northern Ethiopia. Because of its inaccessibility it is one of the least studied lakes of the country. It supports life including three species of fish of which two are endemic. Recently, reports are coming out that this lake is used for salt extraction. This paper gives some ...

  18. Identification of the heme acquisition system in Vibrio vulnificus M2799.

    Kawano, Hiroaki; Miyamoto, Katsushiro; Yasunobe, Megumi; Murata, Masahiro; Yamahata, Eri; Yamaguchi, Ryo; Miyaki, Yuta; Tsuchiya, Takahiro; Tanabe, Tomotaka; Funahashi, Tatsuya; Tsujibo, Hiroshi

    2018-04-01

    Vibrio vulnificus, the causative agent of serious, often fatal, infections in humans, requires iron for its pathogenesis. As such, it obtains iron via both vulnibactin and heme-mediated iron-uptake systems. In this study, we identified the heme acquisition system in V. vulnificus M2799. The nucleotide sequences of the genes encoding heme receptors HupA and HvtA and the ATP-binding cassette (ABC) transport system proteins HupB, HupC, and HupD were determined, and then used in the construction of deletion mutants developed from a Δics strain, which could not synthesize vulnibactin. Growth experiments using these mutants indicated that HupA and HvtA are major and minor heme receptors, respectively. The expressions of two proteins were analyzed by the quantitative reverse-transcriptase polymerase chain reaction (qRT-PCR). Furthermore, complementation analyses confirmed that the HupBCD proteins are the only ABC transport system shared by both the HupA and HvtA receptors. This is the first genetic evidence that the HupBCD proteins are essential for heme acquisition by V. vulnificus. Further investigation showed that hupA, hvtA, and hupBCD are regulated by Fur. The qRT-PCR analysis of the heme receptor genes revealed that HupR, a LysR-family positive transcriptional activator, upregulates the expression of hupA, but not hvtA. In addition, ptrB was co-transcribed with hvtA, and PtrB had no influence on growth in low-iron CM9 medium supplemented with hemin, hemoglobin, or cytochrome C. Copyright © 2018 Elsevier Ltd. All rights reserved.

  19. Mimicking heme enzymes in the solid state: metal-organic materials with selectively encapsulated heme.

    Larsen, Randy W; Wojtas, Lukasz; Perman, Jason; Musselman, Ronald L; Zaworotko, Michael J; Vetromile, Carissa M

    2011-07-13

    To carry out essential life processes, nature has had to evolve heme enzymes capable of synthesizing and manipulating complex molecules. These proteins perform a plethora of chemical reactions utilizing a single iron porphyrin active site embedded within an evolutionarily designed protein pocket. We herein report the first class of metal-organic materials (MOMs) that mimic heme enzymes in terms of both structure and reactivity. The MOMzyme-1 class is based upon a prototypal MOM, HKUST-1, into which catalytically active metalloporphyrins are selectively encapsulated in a "ship-in-a-bottle" fashion within one of the three nanoscale cages that exist in HKUST-1. MOMs offer unparalleled levels of permanent porosity and their modular nature affords enormous diversity of structures and properties. The MOMzyme-1 class could therefore represent a new paradigm for heme biomimetic catalysis since it combines the activity of a homogeneous catalyst with the stability and recyclability of heterogeneous catalytic systems within a single material.

  20. Small Boreal Lake Ecosystem Evolution under the Influence of Natural and Anthropogenic Factors: Results of Multidisciplinary Long-Term Study

    Liudmila Shirokova

    2016-07-01

    Full Text Available Small aquatic ecosystems of the boreal zone are known to be most sensitive indicators of on-going environmental change as well as local anthropogenic pressure, while being highly vulnerable to external impacts. Compared to rather detailed knowledge of the evolution of large and small lakes in Scandinavia and Canada, and large lakes in Eurasia, highly abundant small boreal lakes of northwest Russia have received very little attention, although they may become important centers of attraction of growing rural population in the near future. Here we present the results of a multidisciplinary, multi-annual study of a small boreal humic lake of NW Russia. A shallow (3 m and a deep (16 m site of this lake were regularly sampled for a range of chemical and biological parameters. Average multi-daily, summer-time values of the epilimnion (upper oxygenated layer of the lake provided indications of possible trends in temperature, nutrients, and bacterio-plankton concentration that revealed the local pollution impact in the shallow zone and overall environmental trend in the deep sampling point of the lake. Organic phosphorus, nitrate, and lead were found to be most efficient tracers of local anthropogenic pollution, especially visible in the surface layer of the shallow site of the lake. Cycling of trace elements between the epilimnion and hypolimnion is tightly linked to dissolved organic matter speciation and size fractionation due to the dominance of organic and organo-ferric colloids. The capacity of lake self-purification depends on the ratio of primary productivity to mineralization of organic matter. This ratio remained >1 both during winter and summer periods, which suggests a high potential of lake recovery from the input of allochthonous dissolved organic matter and local anthropogenic pollution.

  1. Coordination modes of tyrosinate-ligated catalase-type heme enzymes: magnetic circular dichroism studies of Plexaura homomalla allene oxide synthase, Mycobacterium avium ssp. paratuberculosis protein-2744c, and bovine liver catalase in their ferric and ferrous states.

    Bandara, D M Indika; Sono, Masanori; Bruce, Grant S; Brash, Alan R; Dawson, John H

    2011-12-01

    Bovine liver catalase (BLC), catalase-related allene oxide synthase (cAOS) from Plexaura homomalla, and a recently isolated protein from the cattle pathogen Mycobacterium avium ssp. paratuberculosis (MAP-2744c (MAP)) are all tyrosinate-ligated heme enzymes whose crystal structures have been reported. cAOS and MAP have low (enzymes in their ferric and ferrous states using magnetic circular dichroism and UV-visible absorption spectroscopy. The MAP protein shows remarkable spectral similarities to cAOS and BLC in its native Fe(III) state, but clear differences from ferric proximal heme ligand His93Tyr Mb (myoglobin) mutant, which may be attributed to the presence of an Arg(+)-N(ω)-H···¯O-Tyr (proximal heme axial ligand) hydrogen bond in the first three heme proteins. Furthermore, the spectra of Fe(III)-CN¯, Fe(III)-NO, Fe(II)-NO (except for five-coordinate MAP), Fe(II)-CO, and Fe(II)-O(2) states of cAOS and MAP, but not H93Y Mb, are also similar to the corresponding six-coordinate complexes of BLC, suggesting that a tyrosinate (Tyr-O¯) is the heme axial ligand trans to the bound ligands in these complexes. The Arg(+)-N(ω)-H to ¯O-Tyr hydrogen bond would be expected to modulate the donor properties of the proximal tyrosinate oxyanion and, combined with the subtle differences in the catalytic site structures, affect the activities of cAOS, MAP and BLC. Copyright © 2011 Elsevier Inc. All rights reserved.

  2. Biomanipulation in shallow lakes in The Netherlands: an evaluation of 18 case studies

    Meijer, M.L.; Boois, de I.; Scheffer, M.; Portielje, R.; Hosper, H.

    1999-01-01

    Eighteen shallow lakes in The Netherlands were subjected to biomanipulation, i.e. drastic reduction of the fish stock, for the purpose of lake restoration. The morphology and the nutrient level of the lakes differed, as did the measures applied. In some lakes biomanipulation was accompanied by

  3. Biodiversity and productivity of Rana Patap Sagar lake a thermo-ecological study

    Verma, P.C.; Sharma, L.L.

    2007-01-01

    Rana Pratap Sagar (RPS) in Rajasthan, is a man made fresh water reservoir and is balancing between Gandhi Sagar on upstream and Jawahar sagar on its down stream. On its eastern bank there exists Rawatbhata Site, comprising of multi -nuclear facilities. There are four PHWR units of Rajasthan Atomic Power Station (RAPS) which are in operations, two are under construction and another two are under advanced stage of planning. In addition to nuclear power plants the Site also houses a Heavy Water Plant and other allied facilities such as cobalt facility and waste management facilities. RAPS draws water from RPS lake through a 300 m long conduit pipe located at lake bottom about 20 m below the surface. Duly treated low level radioactive liquid effluents from RAPS facilities are injected to the warmed condenser outlet and then allowed to discharge to RPS in a controlled manner. The warm water is likely to remain at the surface and get mixed with lake water and cooled due to dilutions, evaporation from lake surface and wind currents. The heat release to the RPS lake through condenser outlet may effect the microbiological and water quality parameters, planktonic biodiversity, fish productivity etc. and thus it is imperative to conduct the thermal ecological study to assess the extent of maturation of the water body to identify its present trophic status in terms of eutrophication. This presentation gives the details of thermal ecological studies carried out at Rana Pratap Sagar lake during 2002-2004 under DAE-BRNS project.. The study includes monitoring of several water quality parameters, biological and bacterial parameters and data on thermal stratification in respect of RPS reservoir. The data so obtained were subjected to statistical analysis. The probabilistic and possibilistic approaches have been applied to evaluate ecological risk. The study reveals that there is no adverse effect on RPS water quality owing to receive the warmed effluents from RAPS. Furthermore, it

  4. Gas-phase spectroscopy of ferric heme-NO complexes

    Wyer, J.A.; Jørgensen, Anders; Pedersen, Bjarke

    2013-01-01

    and significantly blue-shifted compared to ferric heme nitrosyl proteins (maxima between 408 and 422 nm). This is in stark contrast to the Q-band absorption where the protein microenvironment is nearly innocent in perturbing the electronic structure of the porphyrin macrocycle. Photodissociation is primarily...... maxima of heme and its complexes with amino acids and NO. Not so innocent: Weakly bound complexes between ferric heme and NO were synthesised in the gas phase, and their absorption measured from photodissociation yields. Opposite absorption trends in the Soret-band are seen upon NO addition to heme ions...

  5. A mineral magnetic and scaled-chrysophyte paleolimnological study of two northeastern Pennsylvania lakes: records of fly ash deposition, land-use change and paleorainfall variation

    Kodama, K.P.; Lyons, J.C.; Silver, P.A.; Lott, A.M.

    1997-01-01

    A combined mineral magnetic and scaled chrysophyte study of lake sediments from Lake Lacawac and Lake Giles in northeastern Pennsylvania was conducted to determined the effects of land-use and sediment source changes on the variation of pH, conductivity, and alkalinity inferred from biotic changes

  6. Evidence for dynamic behavior of O2 in oxy-heme model compounds

    Montiel-Montoya, R.; Bill, E.; Trautwein, A.X.; Winkler, H.

    1986-01-01

    The authors have performed Moessbauer studies on several oxy-heme model compounds, and for two of them they have also derived the three dimensional structure from X-ray studies. The X-ray structure analysis of these model compounds provides the information that O 2 occupies three different sites in one and only two sites in the other. (Auth.)

  7. Heme oxygenase-1 expression protects melanocytes from stress-induced cell death: implications for vitiligo

    Elassiuty, Yasser E.; Klarquist, Jared; Speiser, Jodi; Yousef, Randa M.; El Refaee, Abdelaziz A.; Hunter, Nahla S.; Shaker, Olfat G.; Gundeti, Mohan; Nieuweboer-Krobotova, Ludmila; Caroline Le Poole, I.

    2011-01-01

    To study protection of melanocytes from stress-induced cell death by heme oxygenases during depigmentation and repigmentation in vitiligo, expression of isoforms 1 and 2 was studied in cultured control and patient melanocytes and normal skin explants exposed to UV or bleaching agent 4-TBP.

  8. Energy transfer at the active sites of heme proteins

    Dlott, D.D.; Hill, J.R.

    1995-01-01

    Experiments using a picosecond pump-probe apparatus at the Picosecond Free-electron Laser Center at Stanford University, were performed to investigate the relaxation of carbon monoxide bound to the active sites of heme proteins. The significance of these experiments is two-fold: (1) they provide detailed information about molecular dynamics occurring at the active sites of proteins; and (2) they provide insight into the nature of vibrational relaxation processes in condensed matter. Molecular engineering is used to construct various molecular systems which are studied with the FEL. We have studied native proteins, mainly myoglobin obtained from different species, mutant proteins produced by genetic engineering using recombinant DNA techniques, and a variety of model systems which mimic the structures of the active sites of native proteins, which are produced using molecular synthesis. Use of these different systems permits us to investigate how specific molecular structural changes affect dynamical processes occurring at the active sites. This research provides insight into the problems of how different species needs are fulfilled by heme proteins which have greatly different functionality, which is induced by rather small structural changes

  9. Study of Morphologic Change in Poyang Lake Basin Caused by Sand Dredging Using Multi-temporal Landsat Images and DEMs

    Qi, S.; Zhang, X.; Wang, D.; Zhu, J.; Fang, C.

    2014-11-01

    Sand dredging has been practiced in rivers, lakes, harbours and coastal areas in recent years in China mostly because of demand from construction industry as building material. Sand dredging has disturbed aquatic ecosystems by affecting hydrological processes, increasing content of suspended sediments and reducing water clarity. Poyang Lake, connecting with Yangtze River in the lower reaches of the Yangtze River, is the largest fresh water lake in China. Sand dredging in Poyang Lake has been intensified since 2001 because such practice was banned in Yangtze River and profitable. In this study, the morphologic change caused by sand dredging in Poyang Lake basin was analysed by overlaying two DEMs acquired in 1952 and 2010 respectively. Since the reflectance of middle infrared band for sand dredging vessel is much higher than that of water surface, sand dredging vessels were showed as isolated grey points and can be counted in the middle infrared band in 12 Landsat images acquired in flooding season during 2000~2010. Another two Landsat images (with low water level before 2000 and after 2010) were used to evaluate the morphologic change by comparing inundation extent and shoreline shape. The following results was obtained: (1) vessels for sand dredging are mainly distributed in the north of Poyang Lake before 2007, but the dredging area was enlarged to the central region and even to Gan River; (2) sand dredging area reached to about 260.4 km2 and is mainly distributed in the north of Songmen Mountain and has been enlarged to central of Poyang Lake from the distribution of sand vessels since 2007. Sand dredged from Poyang Lake was about 1.99 × 109 m3 or 2448 Mt assuming sediment bulk density of 1.23 t m-3. It means that the magnitude of sand mining during 2001-2010 is almost ten times of sand depositions in Poyang Lake during 1955-2010; (3) Sand dredging in Poyang Lake has alternated the lake capacity and discharge section area, some of the watercourse in the

  10. A study of the chemical budget of Lake Baikal using neutron activation and synchrotron radiation

    Granina, L.; Tomza, U.; Arimoto, R.; Grachev, A.; Granin, M.

    2000-01-01

    Beginning in 1993, neutron activation analysis (NAA) and synchrotron radiation X-ray fluorescence analysis (SRXFA) have been used to investigate the composition of particles suspended in Lake Baikal and its major tributaries. Both techniques have provided data on the concentration of a wide range of elements with neutron activation offering the first data on several rare earth elements and other minor elements. While each technique appears to be more suitable for determining the concentration of certain elements than an alternate technique, both techniques are in close agreement in their analysis of most of the elements studied. International standard reference materials were used to calibrate and validate the analyses and allow results from the two methods to be compared. The results of this study have been combined with published data to calculate the total elemental input into the lake

  11. NirN Protein from Pseudomonas aeruginosa is a Novel Electron-bifurcating Dehydrogenase Catalyzing the Last Step of Heme d1 Biosynthesis*

    Adamczack, Julia; Hoffmann, Martin; Papke, Ulrich; Haufschildt, Kristin; Nicke, Tristan; Bröring, Martin; Sezer, Murat; Weimar, Rebecca; Kuhlmann, Uwe; Hildebrandt, Peter; Layer, Gunhild

    2014-01-01

    Heme d1 plays an important role in denitrification as the essential cofactor of the cytochrome cd1 nitrite reductase NirS. At present, the biosynthesis of heme d1 is only partially understood. The last step of heme d1 biosynthesis requires a so far unknown enzyme that catalyzes the introduction of a double bond into one of the propionate side chains of the tetrapyrrole yielding the corresponding acrylate side chain. In this study, we show that a Pseudomonas aeruginosa PAO1 strain lacking the NirN protein does not produce heme d1. Instead, the NirS purified from this strain contains the heme d1 precursor dihydro-heme d1 lacking the acrylic double bond, as indicated by UV-visible absorption spectroscopy and resonance Raman spectroscopy. Furthermore, the dihydro-heme d1 was extracted from purified NirS and characterized by UV-visible absorption spectroscopy and finally identified by high-resolution electrospray ionization mass spectrometry. Moreover, we show that purified NirN from P. aeruginosa binds the dihydro-heme d1 and catalyzes the introduction of the acrylic double bond in vitro. Strikingly, NirN uses an electron bifurcation mechanism for the two-electron oxidation reaction, during which one electron ends up on its heme c cofactor and the second electron reduces the substrate/product from the ferric to the ferrous state. On the basis of our results, we propose novel roles for the proteins NirN and NirF during the biosynthesis of heme d1. PMID:25204657

  12. The Cigar Lake analog study: An international R ampersand D project

    Cramer, J.J.; Sargent, F.P.

    1994-01-01

    This paper provides background information and summarizes the results of AECL's analog study on the Cigar Lake uranium deposit. This R ampersand D project includes national and international cooperation with many organizations directly or indirectly involved in nuclear waste management research. The emphasis is on the analog aspects of this deposit and the implications of modelling activities related to the environmental and safety assessment of the Canadian disposal concept for nuclear fuel waste

  13. Cold Lake-Beaver River water management study update: Report of the Cold Lake Regional Water Management Task Force

    1994-01-01

    The Cold Lake Regional Water Management Task Force was formed in 1992, comprising representatives from local governments, aboriginal groups, the oil industry, and the public. The Task Force's mandate was to advise Alberta Environmental Protection on updating the Cold Lake-Beaver River Water Management Plan, taking into acocunt the views and concerns of the public, industry, and local governments. Industrial water use was found to be the key issue to be addressed in the plan update, so the Task Force focused on reviewing industrial water supply options and developing recommendations on the appropriate water supply to meet long-term requirements. A subcommittee was established to monitor groundwater use by the heavy oil industry. This committee took readings at Imperial Oil's water production and observation wells on a biweekly basis. Nine options for supplying industrial water requirements were examined and evaluated using criteria including supply reliability, economic factors, and impacts on other users and the environment. The Task Force found that the preferred source of water for industrial use is the North Saskatchewan River, to be accessed by a water pipeline. The second and less desirable source of water for industrial use would be a system of weirs on Cold or Primrose Lakes and Wolf Lake, supplemented by the use of brackish water to the maximum extent possible. In the interim, industry was recommended to maximize its use of brackish water and continue to use surface and ground water within existing license limits. Other recommendations were to form provincial or regional boards to oversee water use and issue water licenses, to treat water as a resource, and to establish a fee for industrial use of water. 3 figs., 5 tabs

  14. Heme and menaquinone induced electron transport in lactic acid bacteria

    Santos Filipe

    2009-05-01

    Full Text Available Abstract Background For some lactic acid bacteria higher biomass production as a result of aerobic respiration has been reported upon supplementation with heme and menaquinone. In this report, we have studied a large number of species among lactic acid bacteria for the existence of this trait. Results Heme- (and menaquinone stimulated aerobic growth was observed for several species and genera of lactic acid bacteria. These include Lactobacillus plantarum, Lactobacillus rhamnosus, Lactobacilllus brevis, Lactobacillus paralimentarius, Streptococcus entericus and Lactococcus garviae. The increased biomass production without further acidification, which are respiration associated traits, are suitable for high-throughput screening as demonstrated by the screening of 8000 Lactococcus lactis insertion mutants. Respiration-negative insertion-mutants were found with noxA, bd-type cytochrome and menaquinol biosynthesis gene-disruptions. Phenotypic screening and in silico genome analysis suggest that respiration can be considered characteristic for certain species. Conclusion We propose that the cyd-genes were present in the common ancestor of lactic acid bacteria, and that multiple gene-loss events best explains the observed distribution of these genes among the species.

  15. Heme and menaquinone induced electron transport in lactic acid bacteria.

    Brooijmans, Rob; Smit, Bart; Santos, Filipe; van Riel, Jan; de Vos, Willem M; Hugenholtz, Jeroen

    2009-05-29

    For some lactic acid bacteria higher biomass production as a result of aerobic respiration has been reported upon supplementation with heme and menaquinone. In this report, we have studied a large number of species among lactic acid bacteria for the existence of this trait. Heme- (and menaquinone) stimulated aerobic growth was observed for several species and genera of lactic acid bacteria. These include Lactobacillus plantarum, Lactobacillus rhamnosus, Lactobacilllus brevis, Lactobacillus paralimentarius, Streptococcus entericus and Lactococcus garviae. The increased biomass production without further acidification, which are respiration associated traits, are suitable for high-throughput screening as demonstrated by the screening of 8000 Lactococcus lactis insertion mutants. Respiration-negative insertion-mutants were found with noxA, bd-type cytochrome and menaquinol biosynthesis gene-disruptions. Phenotypic screening and in silico genome analysis suggest that respiration can be considered characteristic for certain species. We propose that the cyd-genes were present in the common ancestor of lactic acid bacteria, and that multiple gene-loss events best explains the observed distribution of these genes among the species.

  16. 78 FR 49735 - Intent To Prepare a Draft Environmental Impact Statement for Dam Safety Study, Lake Lewisville...

    2013-08-15

    ... determine appropriate permanent methods for correcting potential problems, interim risk reduction measures... Environmental Impact Statement for Dam Safety Study, Lake Lewisville Dam, Elm Fork Trinity River, Denton County... primary purposes of the project are flood risk management, [[Page 49736

  17. Great Lakes O shore Wind Project: Utility and Regional Integration Study

    Sajadi, Amirhossein [Case Western Reserve Univ., Cleveland, OH (United States); Loparo, Kenneth A. [Case Western Reserve Univ., Cleveland, OH (United States); D' Aquila, Robert [General Electric (GE), Albany, NY (United States); Clark, Kara [National Renewable Energy Lab. (NREL), Golden, CO (United States); Waligorski, Joseph G. [FirstEnergy, Akron, OH (United States); Baker, Scott [PJM Interconnection, Audubon, PA (United States)

    2016-06-30

    This project aims to identify transmission system upgrades needed to facilitate offshore wind projects as well as operational impacts of offshore generation on operation of the regional transmission system in the Great Lakes region. A simulation model of the US Eastern Interconnection was used as the test system as a case study for investigating the impact of the integration of a 1000MW offshore wind farm operating in Lake Erie into FirstEnergy/PJM service territory. The findings of this research provide recommendations on offshore wind integration scenarios, the locations of points of interconnection, wind profile modeling and simulation, and computational methods to quantify performance, along with operating changes and equipment upgrades needed to mitigate system performance issues introduced by an offshore wind project.

  18. Heme Recognition By a Staphylococcus Aureus IsdE

    Grigg, J.C.; Vermeiren, C.L.; Heinrichs, D.E.; Murphy, M.E.P.

    2009-06-03

    Staphylococcus aureus is a Gram-positive bacterial pathogen and a leading cause of hospital acquired infections. Because the free iron concentration in the human body is too low to support growth, S. aureus must acquire iron from host sources. Heme iron is the most prevalent iron reservoir in the human body and a predominant source of iron for S. aureus. The iron-regulated surface determinant (Isd) system removes heme from host heme proteins and transfers it to IsdE, the cognate substrate-binding lipoprotein of an ATP-binding cassette transporter, for import and subsequent degradation. Herein, we report the crystal structure of the soluble portion of the IsdE lipoprotein in complex with heme. The structure reveals a bi-lobed topology formed by an N- and C-terminal domain bridged by a single {alpha}-helix. The structure places IsdE as a member of the helical backbone metal receptor superfamily. A six-coordinate heme molecule is bound in the groove established at the domain interface, and the heme iron is coordinated in a novel fashion for heme transporters by Met{sup 78} and His{sup 229}. Both heme propionate groups are secured by H-bonds to IsdE main chain and side chain groups. Of these residues, His{sup 299} is essential for IsdE-mediated heme uptake by S. aureus when growth on heme as a sole iron source is measured. Multiple sequence alignments of homologues from several other Gram-positive bacteria, including the human pathogens pyogenes, Bacillus anthracis, and Listeria monocytogenes, suggest that these other systems function equivalently to S. aureus IsdE with respect to heme binding and transport.

  19. Dry powder inhalation of hemin to induce heme oxygenase expression in the lung

    Zijlstra, G.S.; Brandsma, C.; Harpe, M.F.H.; Van Dam, G.M.; Slebos, D.J.; Kerstjens, H.A.M.; de Boer, Anne; Frijlink, H.W.

    2007-01-01

    The purpose of this study was to formulate hemin as a powder for inhalation and to show proof of concept of heme oxygenase 1 (HO-1) expression in the lungs of mice by inhalation of hemin. Hemin was spray dried from a neutralized sodium hydroxide solution. The particle size distribution of the powder

  20. Lake sturgeon population characteristics in Rainy Lake, Minnesota and Ontario

    Adams, W.E.; Kallemeyn, L.W.; Willis, D.W.

    2006-01-01

    Rainy Lake contains a native population of lake sturgeon Acipenser fulvescens that has been largely unstudied. The aims of this study were to document the population characteristics of lake sturgeon in Rainy Lake and to relate environmental factors to year-class strength for this population. Gill-netting efforts throughout the study resulted in the capture of 322 lake sturgeon, including 50 recaptures. Lake sturgeon in Rainy Lake was relatively plump and fast growing compared with a 32-population summary. Population samples were dominated by lake sturgeon between 110 and 150 cm total length. Age–structure analysis of the samples indicated few younger (<10 years) lake sturgeon, but the smallest gill net mesh size used for sampling was 102 mm (bar measure) and would not retain small sturgeon. Few lake sturgeon older than age 50 years were captured, and maximum age of sampled fish was 59 years. Few correlations existed between lake sturgeon year-class indices and both annual and monthly climate variables, except that mean June air temperature was positively correlated with year-class strength. Analysis of Rainy Lake water elevation and resulting lake sturgeon year-class strength indices across years yielded consistent but weak negative correlations between late April and early June, when spawning of lake sturgeon occurs. The baseline data collected in this study should allow Rainy Lake biologists to establish more specific research questions in the future.

  1. Radon as a natural geochemical tracer for study of groundwater discharge into lakes

    Schmidt, Axel

    2008-01-01

    In the presented work the suitability of the naturally occurring radioactive noble gas isotope radon-222 for qualitative and quantitative description of groundwater discharge into lakes was studied. Basis of these investigations was the development of two innovative techniques for the on-site determination of radon in water. In the ex-situ radon measurement procedure, water from the source concerned is taken up in an exchange cell used for this purpose. Inside this cell, the radon dissolved in water is transferred via diffusion into a closed counter-flow of air and subsequently detected by a radon-in-air monitor. Where the in-situ radon determination is concerned, a module composed of a semipermeable membrane is introduced into a water column. Subsequently, the radon dissolved in the water body diffuses through the membrane into the corresponding air flow, by means of which it is transferred into a radon-in-air monitor and is detected. Combination of the developed mobile radon extraction techniques with a suitable and portable radon monitor allow the detection of radon-222 with sufficient accuracy (smaller 20 %) in groundwater as well as in surface waters, i.e., within a broad range of concentrations. Radon-222 was subsequently used to characterize groundwater discharge into a meromictic and a dimictic lake, i.e. two types of lake basically distinct from each other with respect to their water circulation properties were investigated. The use of the noble gas isotope radon-222 as a geochemical tracer makes the application of on-site detection techniques possible and that this in turn permits a rapid, reliable, and cost-effective assessment of groundwater discharge rates into lake water bodies

  2. Radon as a natural geochemical tracer for study of groundwater discharge into lakes

    Schmidt, Axel

    2008-06-27

    In the presented work the suitability of the naturally occurring radioactive noble gas isotope radon-222 for qualitative and quantitative description of groundwater discharge into lakes was studied. Basis of these investigations was the development of two innovative techniques for the on-site determination of radon in water. In the ex-situ radon measurement procedure, water from the source concerned is taken up in an exchange cell used for this purpose. Inside this cell, the radon dissolved in water is transferred via diffusion into a closed counter-flow of air and subsequently detected by a radon-in-air monitor. Where the in-situ radon determination is concerned, a module composed of a semipermeable membrane is introduced into a water column. Subsequently, the radon dissolved in the water body diffuses through the membrane into the corresponding air flow, by means of which it is transferred into a radon-in-air monitor and is detected. Combination of the developed mobile radon extraction techniques with a suitable and portable radon monitor allow the detection of radon-222 with sufficient accuracy (smaller 20 %) in groundwater as well as in surface waters, i.e., within a broad range of concentrations. Radon-222 was subsequently used to characterize groundwater discharge into a meromictic and a dimictic lake, i.e. two types of lake basically distinct from each other with respect to their water circulation properties were investigated. The use of the noble gas isotope radon-222 as a geochemical tracer makes the application of on-site detection techniques possible and that this in turn permits a rapid, reliable, and cost-effective assessment of groundwater discharge rates into lake water bodies.

  3. A STUDY OF RECOVERING A REED ECOSYSTEM USING POROUS CONCRETE IN THE LAKE BIWA SHORE

    Takeda, Naho; Kato, Hayato; Okamoto, Takahisa; Kojima, Takayuki

    In this study, reed planting tests were carried out at the Biyo-center, an experiment station on the Lake Biwa shore, in order to evaluate the feasibility of a planting method with porous concrete (PoC method). Reed planting tests with coconut-fiber mats (mat method), which were generally used around Lake Biwa, were simultaneously carried out to compare with the PoC method. The reeds planted by the PoC method grew better than the ones planted by the mat method, and the number of reeds which were washed away by waves was smaller than that planted by the mat method. The result of the observation of reeds planted in the PoC showed plant maturation, and reeds could ta ke root into the PoC without interference with the voids of the PoC. As a result, it was shown that the reed planting tests with the PoC method was simple and effective, so it would become in harmony with the environment around Lake Biwa.

  4. The persistence of pollutants in large lakes: the lessons from studies of radioactivity

    Edgington, D.N.

    1986-01-01

    Long-lived radionuclides such as 137 Cs and sup(239,240)Pu have proved useful tracers to study the movement of sediments in aquatic systems. Measurements of radionuclides in lakes have provided an understanding of the processes of transport and fate, and the means to estimate critical parameters to be included in models used to predict the persistence of pollutants in aquatic environments. The history of the delivery of these radionuclides to the surface waters of the Great Lakes is better known than other pollutants. Since data sets used to establish the present sedimentation models were established a decade ago, the predictive capability of these models can be tested by investigating the present distribution of these radionuclides in the lakes. Distribution patterns of sedimentation rate and 137 Cs deposition have not changed, and the subsurface peak in activity corresponding to the maximum input flux in the early 1960s has moved downward relative to the bottom of the biologically mixed layer. An assessment is made of average sedimentation rate and mixing depth to include a simple water quality model to predict the concentration of pollutants in water, i.e. coupling simple concentration-time models with the steady-state sedimentation-mixing model. (author)

  5. Heme oxygenase-1, oxidation, inflammation and atherosclerosis

    Jesus A Araujo

    2012-07-01

    Full Text Available Atherosclerosis is an inflammatory process of the vascular wall characterized by the infiltration of lipids and inflammatory cells. Oxidative modifications of infiltrating low density lipoproteins and induction of oxidative stress play a major role in lipid retention in the vascular wall, uptake by macrophages and generation of foam cells, a hallmark of this disorder. The vasculature has a plethora of protective resources against oxidation and inflammation, many of them regulated by the Nrf2 transcription factor. Heme oxygenase-1 (HO-1 is a Nrf2-regulated gene that plays a critical role in the prevention of vascular inflammation. It is the inducible isoform of heme oxygenase, responsible for the oxidative cleavage of heme groups leading to the generation of biliverdin, carbon monoxide and release of ferrous iron. HO-1 has important antioxidant, antiinflammatory, antiapoptotic, antiproliferative and immunomodulatory effects in vascular cells, most of which play a significant role in the protection against atherogenesis. HO-1 may also be an important feature in macrophage differentiation and polarization to certain subtypes. The biological effects of HO-1 are largely attributable to its enzymatic activity, which can be conceived as a system with three arms of action, corresponding to its three enzymatic byproducts. HO-1 mediated vascular protection may be due to a combination of systemic and vascular local effects. It is usually expressed at low levels but can be highly upregulated in the presence of several proatherogenic stimuli. The HO-1 system is amenable for use in the development of new therapies, some of them currently under experimental and clinical trials. Interestingly, in contrast to the HO-1 antiatherogenic actions, the expression of its transcriptional regulator Nrf2 leads to proatherogenic effects instead. This article reviews the evidence that supports the antiatherogenic role of HO-1, potential pathways and mechanisms mediating

  6. Sediment baseline study of levels and sources of polycyclic aromatic hydrocarbons and heavy metals in Lake Nicaragua

    Scheibye, Katrine; Weisser, Johan Juhl; Borggaard, Ole K.

    2014-01-01

    Selected metals and polycyclic aromatic hydrocarbons (PAHs) were analyzed in sediment samples from 24 sites in Lake Nicaragua sampled May 2010 to provide a baseline of pollution levels. Cu exceeded the Consensus-Based Sediment Quality Guideline (CBSQG) Threshold Effect Concentrations (TECs) at 21...... showed that the CBSQG TECs were exceeded by naphthalene at five sites. The sum concentrations of the 16 US EPA priority PAHs (∑PAH16) ranged from 0.01mgkg(-1)dw to 0.64mgkg(-1)dw. The highest ∑PAH16 concentration was found upstream in River Mayales and the PAH composition revealed a heavy PAH fraction (e....... This study concluded that areas of Lake Nicaragua represent an important pollution baseline for future studies in this lake and other tropical lakes....

  7. Heme acquisition mechanisms of Porphyromonas gingivalis - strategies used in a polymicrobial community in a heme-limited host environment.

    Smalley, J W; Olczak, T

    2017-02-01

    Porphyromonas gingivalis, a main etiologic agent and key pathogen responsible for initiation and progression of chronic periodontitis requires heme as a source of iron and protoporphyrin IX for its survival and the ability to establish an infection. Porphyromonas gingivalis is able to accumulate a defensive cell-surface heme-containing pigment in the form of μ-oxo bisheme. The main sources of heme for P. gingivalis in vivo are hemoproteins present in saliva, gingival crevicular fluid, and erythrocytes. To acquire heme, P. gingivalis uses several mechanisms. Among them, the best characterized are those employing hemagglutinins, hemolysins, and gingipains (Kgp, RgpA, RgpB), TonB-dependent outer-membrane receptors (HmuR, HusB, IhtA), and hemophore-like proteins (HmuY, HusA). Proteins involved in intracellular heme transport, storage, and processing are less well characterized (e.g. PgDps). Importantly, P. gingivalis may also use the heme acquisition systems of other bacteria to fulfill its own heme requirements. Porphyromonas gingivalis displays a novel paradigm for heme acquisition from hemoglobin, whereby the Fe(II)-containing oxyhemoglobin molecule must first be oxidized to methemoglobin to facilitate heme release. This process not only involves P. gingivalis arginine- and lysine-specific gingipains, but other proteases (e.g. interpain A from Prevotella intermedia) or pyocyanin produced by Pseudomonas aeruginosa. Porphyromonas gingivalis is then able to fully proteolyze the more susceptible methemoglobin substrate to release free heme or to wrest heme from it directly through the use of the HmuY hemophore. © 2016 John Wiley & Sons A/S. Published by John Wiley & Sons Ltd.

  8. Interaction between Mitochondrial Reactive Oxygen Species, Heme Oxygenase, and Nitric Oxide Synthase Stimulates Phagocytosis in Macrophages

    Andrea Müllebner

    2018-01-01

    Full Text Available BackgroundMacrophages are cells of the innate immune system that populate every organ. They are required not only for defense against invading pathogens and tissue repair but also for maintenance of tissue homeostasis and iron homeostasis.AimThe aim of this study is to understand whether heme oxygenase (HO and nitric oxide synthase (NOS contribute to the regulation of nicotinamide adenine dinucleotide phosphate oxidase (NOX activity and phagocytosis, two key components of macrophage function.MethodsThis study was carried out using resting J774A.1 macrophages treated with hemin or vehicle. Activity of NOS, HO, or NOX was inhibited using specific inhibitors. Reactive oxygen species (ROS formation was determined by Amplex® red assay, and phagocytosis was measured using fluorescein isothiocyanate-labeled bacteria. In addition, we analyzed the fate of the intracellular heme by using electron spin resonance.ResultsWe show that both enzymes NOS and HO are essential for phagocytic activity of macrophages. NOS does not directly affect phagocytosis, but stimulates NOX activity via nitric oxide-triggered ROS production of mitochondria. Treatment of macrophages with hemin results in intracellular accumulation of ferrous heme and an inhibition of phagocytosis. In contrast to NOS, HO products, including carbon monoxide, neither clearly affect NOX activity nor clearly affect phagocytosis, but phagocytosis is accelerated by HO-mediated degradation of heme.ConclusionBoth enzymes contribute to the bactericidal activity of macrophages independently, by controlling different pathways.

  9. The DFT-DVM theoretical study of the differences of quadrupole splitting and the iron electronic structure for the rough heme models for {alpha}- and {beta}-subunits in deoxyhemoglobin and for deoxymyoglobin

    Yuryeva, E. I. [Institute of Solid State Chemistry of the Ural Branch of the Russian Academy of Sciences (Russian Federation); Oshtrakh, M. I., E-mail: oshtrakh@mail.utnet.ru [Ural State Technical University-UPI, Faculty of Physical Techniques and Devices for Quality Control (Russian Federation)

    2008-01-15

    Quantum chemical calculations of the iron electron structure and {sup 57}Fe quadrupole splitting were made by density functional theory and X{alpha} discrete variation method for the rough heme models for {alpha}- and {beta}-subunits in deoxyhemoglobin and for deoxymyoglobin accounting stereochemical differences of the active sites in native proteins. The calculations revealed differences of quadrupole splitting temperature dependences for three models indicating sensitivity of quadrupole splitting and Fe(II) electronic structure to small variations of iron stereochemistry.

  10. Heme: From quantum spin crossover to oxygen manager of life

    Kepp, Kasper Planeta

    2016-01-01

    The review discusses how the electronic structure of heme explains its central importance to oxygen-based life on Earth. Emphasis is on the chemical bonding of heme, its spin crossover, reversible O2 binding, and O-O bond activation, put in relation to its physiological functions. The review disc...

  11. limnological studies of the pelagic zone of lake tanganyika at ...

    Mgina

    result of advection of deep water into the metalimnion (Plisnier et al. 1999, Coulter. 1963) and also decomposition of dead organic matter. In October, heavy scums of. Anabaena spp. were observed in the study area (Hecky and Kling 1981). Nitrate-nitrogen concentrations in the euphotic zone ranged between 26 µg N l-1 in.

  12. Mutations in the FMN domain modulate MCD spectra of the heme site in the oxygenase domain of inducible nitric oxide synthase.

    Sempombe, Joseph; Elmore, Bradley O; Sun, Xi; Dupont, Andrea; Ghosh, Dipak K; Guillemette, J Guy; Kirk, Martin L; Feng, Changjian

    2009-05-27

    The nitric oxide synthase (NOS) output state for NO production is a complex of the flavin mononucleotide (FMN)-binding domain and the heme domain, and thereby it facilitates the interdomain electron transfer from the FMN to the catalytic heme site. Emerging evidence suggests that interdomain FMN-heme interactions are important in the formation of the output state because they guide the docking of the FMN domain to the heme domain. In this study, notable effects of mutations in the adjacent FMN domain on the heme structure in a human iNOS bidomain oxygenase/FMN construct have been observed by using low-temperature magnetic circular dichroism (MCD) spectroscopy. The comparative MCD study of wild-type and mutant proteins clearly indicates that a properly docked FMN domain contributes to the observed L-Arg perturbation of the heme MCD spectrum in the wild-type protein and that the conserved surface residues in the FMN domain (E546 and E603) play key roles in facilitating a productive alignment of the FMN and heme domains in iNOS.

  13. The Haptoglobin-CD163-Heme Oxygenase-1 Pathway for Hemoglobin Scavenging

    Jens Haugbølle Thomsen

    2013-01-01

    Full Text Available The haptoglobin- (Hp- CD163-heme oxygenase-1 (HO-1 pathway is an efficient captor-receptor-enzyme system to circumvent the hemoglobin (Hb/heme-induced toxicity during physiological and pathological hemolyses. In this pathway, Hb tightly binds to Hp leading to CD163-mediated uptake of the complex in macrophages followed by lysosomal Hp-Hb breakdown and HO-1-catalyzed conversion of heme into the metabolites carbon monoxide (CO, biliverdin, and iron. The plasma concentration of Hp is a limiting factor as evident during accelerated hemolysis, where the Hp depletion may cause serious Hb-induced toxicity and put pressure on backup protecting systems such as the hemopexin-CD91-HO pathway. The Hp-CD163-HO-1 pathway proteins are regulated by the acute phase mediator interleukin-6 (IL-6, but other regulatory factors indicate that this upregulation is a counteracting anti-inflammatory response during inflammation. The heme metabolites including bilirubin converted from biliverdin have overall an anti-inflammatory effect and thus reinforce the anti-inflammatory efficacy of the Hp-CD163-HO-1 pathway. Future studies of animal models of inflammation should further define the importance of the pathway in the anti-inflammatory response.

  14. Significance of heme-based respiration in meat spoilage caused by Leuconostoc gasicomitatum.

    Jääskeläinen, Elina; Johansson, Per; Kostiainen, Olli; Nieminen, Timo; Schmidt, Georg; Somervuo, Panu; Mohsina, Marzia; Vanninen, Paula; Auvinen, Petri; Björkroth, Johanna

    2013-02-01

    Leuconostoc gasicomitatum is a psychrotrophic lactic acid bacterium (LAB) which causes spoilage in cold-stored modified-atmosphere-packaged (MAP) meat products. In addition to the fermentative metabolism, L. gasicomitatum is able to respire when exogenous heme and oxygen are available. In this study, we investigated the respiration effects on growth rate, biomass, gene expression, and volatile organic compound (VOC) production in laboratory media and pork loin. The meat samples were evaluated by a sensory panel every second or third day for 29 days. We observed that functional respiration increased the growth (rate and yield) of L. gasicomitatum in laboratory media with added heme and in situ meat with endogenous heme. Respiration increased enormously (up to 2,600-fold) the accumulation of acetoin and diacetyl, which are buttery off-odor compounds in meat. Our transcriptome analyses showed that the gene expression patterns were quite similar, irrespective of whether respiration was turned off by excluding heme from the medium or mutating the cydB gene, which is essential in the respiratory chain. The respiration-based growth of L. gasicomitatum in meat was obtained in terms of population development and subsequent development of sensory characteristics. Respiration is thus a key factor explaining why L. gasicomitatum is so well adapted in high-oxygen packed meat.

  15. Structural characterization of human heme oxygenase-1 in complex with azole-based inhibitors.

    Rahman, Mona N; Vlahakis, Jason Z; Roman, Gheorghe; Vukomanovic, Dragic; Szarek, Walter A; Nakatsu, Kanji; Jia, Zongchao

    2010-03-01

    The development of inhibitors specific for heme oxygenases (HO) aims to provide powerful tools in understanding the HO system. Based on the lead structure (2S, 4S)-2-[2-(4-chlorophenyl)ethyl]-2-[(1H-imidazol-1-yl)methyl]-4-[((4-aminophenyl)thio)methyl]-1,3-dioxolane (azalanstat, QC-1) we have synthesized structural modifications to develop novel and selective HO inhibitors. The structural study of human HO-1 (hHO-1) in complex with a select group of the inhibitors was initiated using X-ray crystallographic techniques. Comparison of the structures of four such compounds each in complex with hHO-1 revealed a common binding mode, despite having different structural fragments. The compounds bind to the distal side of heme through an azole "anchor" which coordinates with the heme iron. An expansion of the distal pocket, mainly due to distal helix flexibility, allows accommodation of the compounds without displacing heme or the critical Asp140 residue. Rather, binding displaces a catalytically critical water molecule and disrupts an ordered hydrogen-bond network involving Asp140. The presence of a triazole "anchor" may provide further stability via a hydrogen bond with the protein. A hydrophobic pocket acts to stabilize the region occupied by the phenyl or adamantanyl moieties of these compounds. Further, a secondary hydrophobic pocket is formed via "induced fit" to accommodate bulky substituents at the 4-position of the dioxolane ring. Copyright 2009 Elsevier Inc. All rights reserved.

  16. PCBP1 and NCOA4 regulate erythroid iron storage and heme biosynthesis.

    Ryu, Moon-Suhn; Zhang, Deliang; Protchenko, Olga; Shakoury-Elizeh, Minoo; Philpott, Caroline C

    2017-05-01

    Developing erythrocytes take up exceptionally large amounts of iron, which must be transferred to mitochondria for incorporation into heme. This massive iron flux must be precisely controlled to permit the coordinated synthesis of heme and hemoglobin while avoiding the toxic effects of chemically reactive iron. In cultured animal cells, iron chaperones poly rC-binding protein 1 (PCBP1) and PCBP2 deliver iron to ferritin, the sole cytosolic iron storage protein, and nuclear receptor coactivator 4 (NCOA4) mediates the autophagic turnover of ferritin. The roles of PCBP, ferritin, and NCOA4 in erythroid development remain unclear. Here, we show that PCBP1, NCOA4, and ferritin are critical for murine red cell development. Using a cultured cell model of erythroid differentiation, depletion of PCBP1 or NCOA4 impaired iron trafficking through ferritin, which resulted in reduced heme synthesis, reduced hemoglobin formation, and perturbation of erythroid regulatory systems. Mice lacking Pcbp1 exhibited microcytic anemia and activation of compensatory erythropoiesis via the regulators erythropoietin and erythroferrone. Ex vivo differentiation of erythroid precursors from Pcbp1-deficient mice confirmed defects in ferritin iron flux and heme synthesis. These studies demonstrate the importance of ferritin for the vectorial transfer of imported iron to mitochondria in developing red cells and of PCBP1 and NCOA4 in mediating iron flux through ferritin.

  17. Novel Insights in Mammalian Catalase Heme Maturation: Effect of NO and Thioredoxin-1

    Chakravarti, Ritu; Gupta, Karishma; Majors, Alana; Ruple, Lisa; Aronica, Mark; Stuehr, Dennis J.

    2016-01-01

    Catalase is a tetrameric heme-containing enzyme with essential antioxidant functions in biology. Multiple factors including nitric oxide (NO) have been shown to attenuate its activity. However, the possible impact of NO in relation to the maturation of active catalase, including its heme acquisition and tetramer formation, has not been investigated. We found that NO attenuates heme insertion into catalase in both short-term and long-term incubations. The NO inhibition in catalase heme incorporation was associated with defective oligomerization of catalase, such that inactive catalase monomers and dimers accumulated in place of the mature tetrameric enzyme. We also found that GAPDH plays a key role in mediating these NO effects on the structure and activity of catalase. Moreover, the NO sensitivity of catalase maturation could be altered up or down by manipulating the cellular expression level or activity of thioredoxin-1, a known protein-SNO denitrosylase enzyme. In a mouse model of allergic inflammatory asthma, we found that lungs from allergen-challenged mice contained a greater percentage of dimeric catalase relative to tetrameric catalase in the unchallenged control, suggesting that the mechanisms described here are in play in the allergic asthma model. Together, our study shows how maturation of active catalase can be influenced by NO, S-nitrosylated GAPDH, and thioredoxin-1, and how maturation may become compromised in inflammatory conditions such as asthma. PMID:25659933

  18. Novel insights in mammalian catalase heme maturation: effect of NO and thioredoxin-1.

    Chakravarti, Ritu; Gupta, Karishma; Majors, Alana; Ruple, Lisa; Aronica, Mark; Stuehr, Dennis J

    2015-05-01

    Catalase is a tetrameric heme-containing enzyme with essential antioxidant functions in biology. Multiple factors including nitric oxide (NO) have been shown to attenuate its activity. However, the possible impact of NO in relation to the maturation of active catalase, including its heme acquisition and tetramer formation, has not been investigated. We found that NO attenuates heme insertion into catalase in both short-term and long-term incubations. The NO inhibition in catalase heme incorporation was associated with defective oligomerization of catalase, such that inactive catalase monomers and dimers accumulated in place of the mature tetrameric enzyme. We also found that GAPDH plays a key role in mediating these NO effects on the structure and activity of catalase. Moreover, the NO sensitivity of catalase maturation could be altered up or down by manipulating the cellular expression level or activity of thioredoxin-1, a known protein-SNO denitrosylase enzyme. In a mouse model of allergic inflammatory asthma, we found that lungs from allergen-challenged mice contained a greater percentage of dimeric catalase relative to tetrameric catalase in the unchallenged control, suggesting that the mechanisms described here are in play in the allergic asthma model. Together, our study shows how maturation of active catalase can be influenced by NO, S-nitrosylated GAPDH, and thioredoxin-1, and how maturation may become compromised in inflammatory conditions such as asthma. Copyright © 2015 Elsevier Inc. All rights reserved.

  19. The aliphatic hydrocarbon distributions of terrestrial plants around an alpine lake: a pilot study from Lake Ximencuo, Eastern Qinghai-Tibet Plateau

    Pu, Yang; Jia, Jihong; Cao, Jicheng

    2017-12-01

    As part of an investigation of the sources of aliphatic hydrocarbons to the sediments of alpine Lake Ximencuo, leaves of the eight dominant vascular plants were collected and their hydrocarbon contents were analyzed. A series of unsaturated aliphatic hydrocarbons were identified in the plant leaves; in particular, Festuca sp. contain a series of n-alkadienes that have rarely been reported in previous studies. The comparison of n-alkane proxies (ACL 27-33, ACL T, P aq, and CPI) and δ13Corg among plant leaves, surface soils, and lake sediments suggests that organic proxies have been altered to varying degrees during the transport and burial process of organic materials. It is believed that microbial reworking and source changes have great impacts on organic proxies in the alpine lake system. In addition, the cluster analysis for plant leaves depending on n-alkane compositions and the ACL T proxy generates similar results. Accordingly, we postulate that the average chain length of plant waxes might be a potential indicator of plant classification in regions such as the Qinghai-Tibet Plateau.

  20. Covalent heme attachment to the protein in human heme oxygenase-1 with selenocysteine replacing the His25 proximal iron ligand.

    Jiang, Yongying; Trnka, Michael J; Medzihradszky, Katalin F; Ouellet, Hugues; Wang, Yongqiang; Ortiz de Montellano, Paul R

    2009-03-01

    To characterize heme oxygenase with a selenocysteine (SeCys) as the proximal iron ligand, we have expressed truncated human heme oxygenase-1 (hHO-1) His25Cys, in which Cys-25 is the only cysteine, in the Escherichia coli cysteine auxotroph strain BL21(DE3)cys. Selenocysteine incorporation into the protein was demonstrated by both intact protein mass measurement and mass spectrometric identification of the selenocysteine-containing tryptic peptide. One selenocysteine was incorporated into approximately 95% of the expressed protein. Formation of an adduct with Ellman's reagent (DTNB) indicated that the selenocysteine in the expressed protein was in the reduced state. The heme-His25SeCys hHO-1 complex could be prepared by either (a) supplementing the overexpression medium with heme, or (b) reconstituting the purified apoprotein with heme. Under reducing conditions in the presence of imidazole, a covalent bond is formed by addition of the selenocysteine residue to one of the heme vinyl groups. No covalent bond is formed when the heme is replaced by mesoheme, in which the vinyls are replaced by ethyl groups. These results, together with our earlier demonstration that external selenolate ligands can transfer an electron to the iron [Y. Jiang, P.R. Ortiz de Montellano, Inorg. Chem. 47 (2008) 3480-3482 ], indicate that a selenyl radical is formed in the hHO-1 His25SeCys mutant that adds to a heme vinyl group.

  1. The assessment of land use change impact on watersheds runoff using SWAT: case study of Urmia Lake in Iran

    Jabbari, Anahita; Jarihani, Ben; Rezaie, Hossein

    2015-04-01

    Lake Urmia, long counted among the world's largest saltwater lakes, contains only 5% of the amount of water it did just 20 years ago. The decline is generally blamed on a combination of drought, increased water diversion for irrigated agriculture within the lake's watershed and land use mismanagement. It has been believed that land use changes in Lake Urmia basin is one of the most important factors in shrinkage of Urmia Lake in recent decades. Transforming the traditional agricultural practices (i.e., wheat) to the more water consuming practices (i.e., apple orchards) is one of the most important reasons increased agricultural water consumption in the watershed. In this study we assessed the effect of the land use changes of watershed in hydrological runoff processing in the Nazloo chai watershed, one of the most important river basins of the Urmia Lake basin. Actually the rapid and at the same time unreasonable transformations of land use in farm lands of Urmia lake sub basins, extremely has been raised the amount of blue water (surface or groundwater) consumption in watershed which leads to dramatic decrement of watershed runoff amounts. One of the most unfavorable consequences of land use change was changing the blue and green (rainwater insofar as it does not become runoff) water usage patterns in watershed, in addition to water use increment. The soil and water assessment tool (SWAT), one of the most important and reliable models which was used to model the rainfall runoff, has been used in current study. The land use maps were extracted from Landsat images archives for the most severe turning points in respect of land use change in the recent 30 years. After calibrating the model, several land use patterns of historical data were used in the model to produce the runoff. The results showed the strong relation between land use change and runoff reduction in the Lake Urmia basin.

  2. Marine lake as in situ laboratory for studies of organic matter influence on speciation and distribution of trace metals

    Mlakar, Marina; Fiket, Željka; Geček, Sunčana; Cukrov, Neven; Cuculić, Vlado

    2015-07-01

    Karst marine lakes are unique marine systems, also recognized as in situ "laboratories" in which geochemical processes on a different scale compared to the open sea, can be observed. In this study, organic matter cycle and its impact on distribution of trace metals in the marine lake Mir, located on Dugi Otok Island, in the central part of the eastern Adriatic Sea, was investigated for the first time. Studied marine lake is small, isolated, shallow basin, with limited communication with the open sea. Intense spatial and seasonal variations of organic matter, dissolved and particulate (DOC, POC), and dissolved trace metals concentrations in the water column of the Lake are governed predominantly by natural processes. Enhanced oxygen consumption in the Lake during summer season, high DOC and POC concentrations and low redox potential result in occasional occurrence of anoxic conditions in the bottom layers with appearance of sulfur species. Speciation modeling showed that dissolved trace metals Cu, Pb and Zn, are mostly bound to organic matter, while Cd, Co and Ni are present predominantly as free ions and inorganic complexes. Trace metals removal from the water column and their retention in the sediment was found to depend on the nature of the relationship between specific metal and organic or inorganic phases, sulfides, Fe-oxyhydroxydes or biogenic calcite. The above is reflected in the composition of the sediments, which are, in addition to influence of karstic background and bathymetry of the basin, significantly affected by accumulation of detritus at the bottom of the Lake.

  3. Three air quality studies: Great Lakes ozone formation and nitrogen dry deposition; and Tucson aerosol chemical characterization

    Foley, Theresa

    The Clean Air Act of 1970 was promulgated after thousands of lives were lost in four catastrophic air pollution events. It authorized the establishment of National Ambient Air Quality Standards or (NAAQS) for six pollutants that are harmful to human health and welfare: carbon monoxide, lead, nitrogen dioxide, particulate matter, ozone and sulfur dioxide. The Clean Air Act also led to the establishment of the United Stated Environmental Protection Agency (US EPA) to set and enforce regulations. The first paper in this dissertation studies ozone in the Lake Michigan region (Foley, T., Betterton, E.A., Jacko, R., Hillery, J., 2011. Lake Michigan air quality: The 1994-2003 LADCO Aircraft Project (LAP). Atmospheric Environment 45, 3192-3202.) The Chicago-Milwaukee-Gary metropolitan area has been unable to meet the ozone NAAQS since the Clean Air Act was implemented. The Lake Michigan Air Directors' Consortium (LADCO) hypothesized that land breezes transport ozone precursor compounds over the lake, where a large air/water temperature difference creates a shallow conduction layer, which is an efficient reaction chamber for ozone formation. In the afternoon, lake breezes and prevailing synoptic winds then transport ozone back over the land. To further evaluate this hypothesis, LADCO sponsored the 1994-2003 LADCO Aircraft Project (LAP) to measure the air quality over Lake Michigan and the surrounding areas. This study has found that the LAP data supports this hypothesis of ozone formation, which has strong implications for ozone control strategies in the Lake Michigan region. The second paper is this dissertation (Foley, T., Betterton, E.A., Wolf, A.M.A., 2012. Ambient PM10 and metal concentrations measured in the Sunnyside Unified School District, Tucson, Arizona. Journal of the Arizona-Nevada Academy of Science, 43, 67-76) evaluated the airborne concentrations of PM10 (particulate matter with an aerodynamic diameter of 10 microns or less) and eight metalloids and metals

  4. A National Probabilistic Study of Polybrominated Diphenyl Ethers in Fish from US Lakes and Reservoirs

    National estimates were developed for polybrominated diphenyl ethers (PBDEs) in fish from lakes and reservoirs of the conterminous United States (excluding the Laurentian Great Lakes and Great Salt Lake) using an unequal probability design. Predator (fillet) and bottom-dweller (w...

  5. Final report of the AECL/SKB Cigar Lake analog study

    Cramer, J.

    1994-05-01

    The Cigar Lake uranium deposit is located in northern Saskatchewan, Canada. The 1.3-billion-year-old deposit is located at a depth of about 450 m below surface in a water-saturated sandstone at the unconformity contact with the high-grade metamorphic rocks of the Canadian Shield. The Cigar Lake deposit has many features that parallel those being considered within the Canadian concept for disposal of nuclear fuel waste. The study of these natural structures and processes provides valuable insight toward the eventual design and site selection of a nuclear fuel waste repository. The main feature of this analog is the absence of any indication on the surface of the rich uranium ore 450 m below. This indicates that the combination of natural barriers has been effective in isolating the uranium ore from the surface environment. More specifically, the deposit provides analog information relevant to the stability of UO 2 fuel waste, the performance of clay-based barriers, radionuclide migration, colloid formation, radiolysis, fission-product geochemistry and general aspects of water-rock interaction. The main geochemical studies on this deposit focus on the evolution of groundwater compositions in the deposit and on their redox chemistry with respect to the uranium, iron and sulphide systems. Since 1984, through cooperation from the owners of the Cigar Lake deposit, analog studies have been conducted. AECL, with support from Ontario Hydro under the auspices of the CANDU Owners Group, initiated international participation in 1989 through collaboration with the Swedish Nuclear Fuel and Waste Management Company (SKB) and, more recently, with the Los Alamos National Laboratory (LANL). This report gives the results of the various studies carried out during the 3-year collaboration between AECL and SKB, as well as a summery of the LANL study. It provides detailed information on the generated databases and models, and integrates this information into conclusions for use in safety

  6. Histidine at Position 195 is Essential for Association of Heme-b in Lcp1VH2

    Oetermann, Sylvia; Vivod, Robin; Hiessl, Sebastian; Hogeback, Jens; Holtkamp, Michael; Karst, Uwe; Steinbüchel, Alexander

    2018-03-01

    The latex clearing protein (Lcp) is the key enzyme of polyisoprene degradation in actinomycetes (Yikmis and Steinbüchel in Appl Environ Microbiol 78:4543-4551, https://doi.org/10.1128/AEM.00001-12, 2012). In this study it was shown that Lcp from Gordonia polyisoprenivorans VH2 (Lcp1VH2) harbors a non-covalently bound heme b as cofactor, which was identified by pyridine hemochrome spectra and confirmed by LC/ESI-ToF-MS. It contains iron, most likely in the Fe3+ state. We focused on the characterization of the heme-cofactor, its accessibility with respect to the conformation of Lcp1VH2, and the identification of putative histidine residues involved in the coordination of heme. A change was detectable in UV/Vis-spectra of reduced Lcp1VH2 when imidazole was added, showing that Lcp1VH2 "as isolated" occurs in an open state, directly being accessible for external ligands. In addition, three highly conserved histidines (H195, H200 and H228), presumably acting as ligands coordinating the heme within the heme pocket, were replaced with alanines by site-directed mutagenesis. The effect of these changes on in vivo rubber-mineralization was investigated. The lcp- deletion mutant complemented with the H195A variant of lcp1 VH2 was unable to mineralize poly(cis-1,4-isoprene). In vitro analyses of purified, recombinant Lcp1VH2H195A confirmed the loss of enzyme activity, which could be ascribed to the loss of heme. Hence, H195 is essential for the association of heme-b in the central region of Lcp1VH2.

  7. Bio-functionalization of electro-synthesized polypyrrole surface by heme enzyme using a mixture of Nafion and glutaraldehyde as synergetic immobilization matrix: Conformational characterization and electrocatalytic studies

    ElKaoutit, Mohammed; Naranjo-Rodriguez, Ignacio; Dominguez, Manuel; Hidalgo-Hidalgo-de-Cisneros, Jose Luis

    2011-01-01

    Use of a mixture of Nafion and glutaraldehyde as new immobilization matrix was described. The percentage of Nafion was optimized to prevent denaturation of horseradish peroxidase enzyme after its crosslinkage with glutaraldehyde on electro-synthesized polypyrrole surface. Topographic study by Atomic Force Microscopy (AFM) shows that the enzyme seems to have been introduced inside the ionic cluster of Nafion. The characterization of the resulting bio-interfaces by UV-vis and FT-IR shows that the intra-crosslinkage phenomena caused by the use of glutaraldehyde can be eliminated by the optimization of the concentration of Nafion additive. The secondary structure contents of native and immobilized enzyme were analyzed by a Gaussian curve fitting of the respective FT-IR spectra in the amide I region. Immobilized enzyme presented notable increasing percentages of globular and short helical structure compared with native enzyme. This indicates that immobilized enzyme was folded which is in accordance with AFM studies and supports the enzyme entrance inside ionic clutter of Nafion. Thanks to synergic effects of the polypyrrole conducting polymer and the perfluorosulfonic acid polymer Nafion, HRP enzyme was immobilized in its 'native' state, the resulting biosensor was able to sense peroxide without any chemical mediator and can be categorized as third generation.

  8. Bio-functionalization of electro-synthesized polypyrrole surface by heme enzyme using a mixture of Nafion and glutaraldehyde as synergetic immobilization matrix: Conformational characterization and electrocatalytic studies

    ElKaoutit, Mohammed, E-mail: elkaoutit@uca.es [Departamento de Quimica Analitica, Facultad de Ciencias, Universidad de Cadiz, 11510 Puerto Real, Cadiz (Spain); Naranjo-Rodriguez, Ignacio [Departamento de Quimica Analitica, Facultad de Ciencias, Universidad de Cadiz, 11510 Puerto Real, Cadiz (Spain); Dominguez, Manuel [Departamento de Fisica de la Materia Condensada, Facultad de Ciencias, Universidad de Cadiz, 11510 Puerto Real, Cadiz (Spain); Hidalgo-Hidalgo-de-Cisneros, Jose Luis [Departamento de Quimica Analitica, Facultad de Ciencias, Universidad de Cadiz, 11510 Puerto Real, Cadiz (Spain)

    2011-10-01

    Use of a mixture of Nafion and glutaraldehyde as new immobilization matrix was described. The percentage of Nafion was optimized to prevent denaturation of horseradish peroxidase enzyme after its crosslinkage with glutaraldehyde on electro-synthesized polypyrrole surface. Topographic study by Atomic Force Microscopy (AFM) shows that the enzyme seems to have been introduced inside the ionic cluster of Nafion. The characterization of the resulting bio-interfaces by UV-vis and FT-IR shows that the intra-crosslinkage phenomena caused by the use of glutaraldehyde can be eliminated by the optimization of the concentration of Nafion additive. The secondary structure contents of native and immobilized enzyme were analyzed by a Gaussian curve fitting of the respective FT-IR spectra in the amide I region. Immobilized enzyme presented notable increasing percentages of globular and short helical structure compared with native enzyme. This indicates that immobilized enzyme was folded which is in accordance with AFM studies and supports the enzyme entrance inside ionic clutter of Nafion. Thanks to synergic effects of the polypyrrole conducting polymer and the perfluorosulfonic acid polymer Nafion, HRP enzyme was immobilized in its 'native' state, the resulting biosensor was able to sense peroxide without any chemical mediator and can be categorized as third generation.

  9. Final report of the AECL/SKB Cigar Lake analog study

    Cramer, J.J.

    1994-07-01

    The Cigar Lake uranium deposit is located in northern Saskatchewan, Canada. The 1.3-billion-year-old deposit is located at a depth of about 450 m below surface in a water-saturated sandstone at the unconformity contact with the high-grade metamorphic rocks of the Canadian Shield. The uranium mineralization, consisting primarily of uraninite (UO 2 ), is surrounded by a clay-rich halo in both sandstone and basement rocks, and remains extremely well preserved and intact. The average grade of the mineralization is ∼ 8 wt.% U; locally grades are as high as ∼ 55 wt.%U. The Cigar lake deposit has many features that parallel those being considered within the Canadian concept for disposal of nuclear fuel waste. Specifically, the deposit provides analog information relevant to the stability of UO 2 fuel waste, the performance of clay-based barriers, radionuclide migration, colloid formation, radiolysis, fission-product geochemistry and general aspects of water-rock interaction. The main geochemical studies on this deposit focus on the evolution of groundwater compositions in the deposit and on their redox chemistry with respect to the uranium, iron and sulphide systems. Since 1984, through cooperation from the owners of the Cigar lake deposit, analog studies have been conducted. AECL, with support from Ontario Hydro under the auspices of the CANDU Owners Group, initiated international participation in 1989 through collaboration with the Swedish Nuclear Fuel and Waste Management Company (SKB) and, more recently, with the Los Alamos National Laboratory (LANL). This report gives the results of the various studies carried out during the 3-year collaboration between AECL and SKB, as well as a summary of the LANL study. It provides detailed information on the generated databases and models, and integrates this information into conclusions for use in safety assessment of the Canadian, Swedish and United States disposal concepts. 15 refs., 25 figs., 55 tabs

  10. Using radon-222 for tracing groundwater discharge into an open-pit lignite mining lake--a case study.

    Schmidt, Axel; Schubert, Michael

    2007-12-01

    Groundwater discharge into an open pit lignite mining lake was investigated using radon-222 as a naturally occurring environmental tracer. The chosen study site was a meromictic lake, i.e., a water body that is divided horizontally into two separate layers--the upper mixolimnion (with seasonal mixing) and the lower monimolimnion (without seasonal mixing). For the estimation of groundwater discharge rates into the lake, a simple box model including all radon sinks and sources related to each layer was applied. Two field investigations were performed. During the October campaign, the total groundwater discharge into the lake was found to be 18.9 and 0.7 m(3) d(-1) for the mixolimnion and monimolimnion, respectively. During the December campaign, the groundwater discharge into the mixolimnion was 15.0 m(3) d(-1), whereas no discharge at all was observed into the monimolimnion. Based on the given water volumes, the residence time of lake water was 5.3 years for the monimolimnion and varies between 0.9 and 1.1 years for the mixolimnion. The investigation confirmed radon to be a useful environmental tracer for groundwater and surface water interactions in meromictic lake environments.

  11. Progress in study of Prespa Lake using nuclear and related techniques (IAEA Regional Project RER/8/008)

    Anovski, Todor

    2001-09-01

    One of the main objective of the IAEA - Regional project RER/8/008 entitled Study of Prespa Lake Using Nuclear and Related Techniques was to provide a scientific basis for sustainable and environmental management of the Lake Prespa (Three lakes: Ohrid, Big Prespa and Small Prespa are on the borders between Albania, Republic of Macedonia and Greece, and are separated by the Mali i Thate and Galichica, mostly Carstificated mountains), see Fig. 1. In this sense investigations connected with the hydrogeology, water quality (Physics-chemical, biological and radiological characteristics) and water balance determination by application of Environmental isotopes ( i.e. H,D,T,O-18,O-18 etc.,) distribution, artificial water tracers and other relevant analytical techniques such as: AAS, HPLC, Total α and β-activity, α and γ-spectrometry as well as ultra sonic measurements (defining of the Lake bottom profile) through regional cooperation / Scientists from Albania, Greece and Republic of Macedonia, participated in the implementation of the Project/ during one hydrological year, had been initiated and valuable results obtained, a part of which are presented in this report. This cooperation was the only way for providing necessary data for better understanding beside the other, of the water quality of the Prespa Lake and its hydrological relationship to Ohrid Lake too, representing a unique regional hydro system in the world. (Author)

  12. Increase on the initial soluble heme levels in acidic conditions is an important mechanism for spontaneous heme crystallization in vitro.

    Renata Stiebler

    Full Text Available BACKGROUND: Hemozoin (Hz is a heme crystal that represents a vital pathway for heme disposal in several blood-feeding organisms. Recent evidence demonstrated that β-hematin (βH (the synthetic counterpart of Hz formation occurs under physiological conditions near synthetic or biological hydrophilic-hydrophobic interfaces. This seems to require a heme dimer acting as a precursor of Hz crystals that would be formed spontaneously in the absence of the competing water molecules bound to the heme iron. Here, we aimed to investigate the role of medium polarity on spontaneous βH formation in vitro. METHODOLOGY/PRINCIPAL FINDINGS: We assessed the effect of water content on spontaneous βH formation by using the aprotic solvent dimethylsulfoxide (DMSO and a series of polyethyleneglycols (PEGs. We observed that both DMSO and PEGs (3.350, 6.000, 8.000, and 22.000 increased the levels of soluble heme under acidic conditions. These compounds were able to stimulate the production of βH crystals in the absence of any biological sample. Interestingly, the effects of DMSO and PEGs on βH formation were positively correlated with their capacity to promote previous heme solubilization in acidic conditions. Curiously, a short chain polyethyleneglycol (PEG 300 caused a significant reduction in both soluble heme levels and βH formation. Finally, both heme solubilization and βH formation strongly correlated with reduced medium water activity provided by increased DMSO concentrations. CONCLUSIONS: The data presented here support the notion that reduction of the water activity is an important mechanism to support spontaneous heme crystallization, which depends on the previous increase of soluble heme levels.

  13. Heme-bound nitroxyl, hydroxylamine, and ammonia ligands as intermediates in the reaction cycle of cytochrome c nitrite reductase: a theoretical study.

    Bykov, Dmytro; Plog, Matthias; Neese, Frank

    2014-01-01

    In this article, we consider, in detail, the second half-cycle of the six-electron nitrite reduction mechanism catalyzed by cytochrome c nitrite reductase. In total, three electrons and four protons must be provided to reach the final product, ammonia, starting from the HNO intermediate. According to our results, the first event in this half-cycle is the reduction of the HNO intermediate, which is accomplished by two PCET reactions. Two isomeric radical intermediates, HNOH(•) and H2NO(•), are formed. Both intermediates are readily transformed into hydroxylamine, most likely through intramolecular proton transfer from either Arg114 or His277. An extra proton must enter the active site of the enzyme to initiate heterolytic cleavage of the N-O bond. As a result of N-O bond cleavage, the H2N(+) intermediate is formed. The latter readily picks up an electron, forming H2N(+•), which in turn reacts with Tyr218. Interestingly, evidence for Tyr218 activity was provided by the mutational studies of Lukat (Biochemistry 47:2080, 2008), but this has never been observed in the initial stages of the overall reduction process. According to our results, an intramolecular reaction with Tyr218 in the final step of the nitrite reduction process leads directly to the final product, ammonia. Dissociation of the final product proceeds concomitantly with a change in spin state, which was also observed in the resonance Raman investigations of Martins et al. (J Phys Chem B 114:5563, 2010).

  14. A multiproxy study of Holocene water-depth and environmental changes in Lake St Ana, Eastern Carpathian Mountains, Romania

    Magyari, E. K.; Buczkó, K.; Braun, M.; Jakab, G.

    2009-04-01

    This study presents the results of a multi-disciplinary investigation carried out on the sediment of a crater lake (Lake Saint Ana, 950 m a.s.l.) from the Eastern Carpathian Mountains. The lake is set in a base-poor volcanic environment with oligotrophic and slightly acidic water. Loss-on-ignition, major and trace element, pollen, plant macrofossil and siliceous algae analyses were used to reconstruct Holocene environmental and water-depth changes. Diatom-based transfer functions were applied to estimate the lake's trophic status and pH, while reconstruction of the water-depth changes was based on the plant macrofossil and diatom records. The lowest Holocene water-depths were found between 9,000 and 7,400 calibrated BP years, when the crater was occupied by Sphagnum-bog and bog-pools. The major trend from 7,400 years BP was a gradual increase, but the basin was still dominated by poor-fen and poor fen-pools. Significant increases in water-depth, and meso/oligotrophic lake conditions were found from 5,350(1), 3,300(2) and 2,700 years BP. Of these, the first two coincided with major terrestrial vegetation changes, namely the establishment of Carpinus betulus on the crater slope (1), and the replacement of the lakeshore Picea abies forest by Fagus sylvatica (2). The chemical record clearly indicated significant soil changes along with the canopy changes (from coniferous to deciduous), that in turn led to increased in-lake productivity and pH. A further increase in water-depth around 2,700 years BP resulted in stable thermal stratification and hypolimnetic anoxia that via P-release further increased in-lake productivity and eventually led to phytoplankton blooms with large populations of Scenedesmus cf. S. brasiliensis. High productivity was depressed by anthropogenic lakeshore forest clearances commencing from ca. 1,000 years BP that led to the re-establishment of Picea abies on the lakeshore and consequent acidification of the lake-water. On the whole, these data

  15. The Impact of Nutrient State and Lake Depth on Top-down Control in the Pelagic Zone of Lakes: A Study of 466 Lakes from the Temperate Zone to the Arctic

    Jeppesen, E.; Jensen, J. P.; Jensen, C.

    2003-01-01

    is unimodally related to TP and is highest in the most nutrient-rich and nutrient-poor lakes and generally higher in shallow than deep lakes, (b) the cascading effect of changes in predator control on phytoplankton decreases with increasing TP, and (c) these general patterns occur with significant variations......%, respectively, at all TP levels. Moreover, deep lakes (more than 6 m) had a higher percentage of Daphnia than shallow (less than 6 m) lakes. The median percentage of Daphnia peaked at 0.15 mg L-1 in shallow lakes and 0.09 mg L-1 in deep lakes. The assumption that fish are responsible for the unimodality...

  16. A central role for heme iron in colon carcinogenesis associated with red meat intake.

    Bastide, Nadia M; Chenni, Fatima; Audebert, Marc; Santarelli, Raphaelle L; Taché, Sylviane; Naud, Nathalie; Baradat, Maryse; Jouanin, Isabelle; Surya, Reggie; Hobbs, Ditte A; Kuhnle, Gunter G; Raymond-Letron, Isabelle; Gueraud, Françoise; Corpet, Denis E; Pierre, Fabrice H F

    2015-03-01

    Epidemiology shows that red and processed meat intake is associated with an increased risk of colorectal cancer. Heme iron, heterocyclic amines, and endogenous N-nitroso compounds (NOC) are proposed to explain this effect, but their relative contribution is unknown. Our study aimed at determining, at nutritional doses, which is the main factor involved and proposing a mechanism of cancer promotion by red meat. The relative part of heme iron (1% in diet), heterocyclic amines (PhIP + MeIQx, 50 + 25 μg/kg in diet), and NOC (induced by NaNO₂+ NaNO₂; 0.17 + 0.23 g/L of drinking water) was determined by a factorial design and preneoplastic endpoints in chemically induced rats and validated on tumors in Min mice. The molecular mechanisms (genotoxicity, cytotoxicity) were analyzed in vitro in normal and Apc-deficient cell lines and confirmed on colon mucosa. Heme iron increased the number of preneoplastic lesions, but dietary heterocyclic amines and NOC had no effect on carcinogenesis in rats. Dietary hemoglobin increased tumor load in Min mice (control diet: 67 ± 39 mm²; 2.5% hemoglobin diet: 114 ± 47 mm², P = 0.004). In vitro, fecal water from rats given hemoglobin was rich in aldehydes and was cytotoxic to normal cells, but not to premalignant cells. The aldehydes 4-hydroxynonenal and 4-hydroxyhexenal were more toxic to normal versus mutated cells and were only genotoxic to normal cells. Genotoxicity was also observed in colon mucosa of mice given hemoglobin. These results highlight the role of heme iron in the promotion of colon cancer by red meat and suggest that heme iron could initiate carcinogenesis through lipid peroxidation. . ©2015 American Association for Cancer Research.

  17. No changes in heme synthesis in human Friedreich´s ataxia erythroid progenitor cells.

    Steinkellner, Hannes; Singh, Himanshu Narayan; Muckenthaler, Martina U; Goldenberg, Hans; Moganty, Rajeswari R; Scheiber-Mojdehkar, Barbara; Sturm, Brigitte

    2017-07-20

    Friedreich's ataxia (FRDA) is a neurodegenerative disease caused by reduced expression of the protein frataxin. Frataxin is thought to play a role in iron-sulfur cluster biogenesis and heme synthesis. In this study, we used erythroid progenitor stem cells obtained from FRDA patients and healthy donors to investigate the putative role, if any, of frataxin deficiency in heme synthesis. We used electrochemiluminescence and qRT-PCR for frataxin protein and mRNA quantification. We used atomic absorption spectrophotometry for iron levels and a photometric assay for hemoglobin levels. Protoporphyrin IX and Ferrochelatase were analyzed using auto-fluorescence. An "IronChip" microarray analysis followed by a protein-protein interaction analysis was performed. FRDA patient cells showed no significant changes in iron levels, hemoglobin synthesis, protoporphyrin IX levels, and ferrochelatase activity. Microarray analysis presented 11 genes that were significantly changed in all patients compared to controls. The genes are especially involved in oxidative stress, iron homeostasis and angiogenesis. The mystery about the involvement of frataxin on iron metabolism raises the question why frataxin deficiency in primary FRDA cells did not lead to changes in biochemical parameters of heme synthesis. It seems that alternative pathways can circumvent the impact of frataxin deficiency on heme synthesis. We show for the first time in primary FRDA patient cells that reduced frataxin levels are still sufficient for heme synthesis and possibly other mechanisms can overcome reduced frataxin levels in this process. Our data strongly support the fact that so far no anemia in FRDA patients was reported. Copyright © 2017 Elsevier B.V. All rights reserved.

  18. A Heme-responsive Regulator Controls Synthesis of Staphyloferrin B in Staphylococcus aureus.

    Laakso, Holly A; Marolda, Cristina L; Pinter, Tyler B; Stillman, Martin J; Heinrichs, David E

    2016-01-01

    Staphylococcus aureus possesses a multitude of mechanisms by which it can obtain iron during growth under iron starvation conditions. It expresses an effective heme acquisition system (the iron-regulated surface determinant system), it produces two carboxylate-type siderophores staphyloferrin A and staphyloferrin B (SB), and it expresses transporters for many other siderophores that it does not synthesize. The ferric uptake regulator protein regulates expression of genes encoding all of these systems. Mechanisms of fine-tuning expression of iron-regulated genes, beyond simple iron regulation via ferric uptake regulator, have not been uncovered in this organism. Here, we identify the ninth gene of the sbn operon, sbnI, as encoding a ParB/Spo0J-like protein that is required for expression of genes in the sbn operon from sbnD onward. Expression of sbnD-I is drastically decreased in an sbnI mutant, and the mutant does not synthesize detectable SB during early phases of growth. Thus, SB-mediated iron acquisition is impaired in an sbnI mutant strain. We show that the protein forms dimers and tetramers in solution and binds to DNA within the sbnC coding region. Moreover, we show that SbnI binds heme and that heme-bound SbnI does not bind DNA. Finally, we show that providing exogenous heme to S. aureus growing in an iron-free medium results in delayed synthesis of SB. This is the first study in S. aureus that identifies a DNA-binding regulatory protein that senses heme to control gene expression for siderophore synthesis. © 2016 by The American Society for Biochemistry and Molecular Biology, Inc.

  19. A Heme-responsive Regulator Controls Synthesis of Staphyloferrin B in Staphylococcus aureus*♦

    Laakso, Holly A.; Marolda, Cristina L.; Pinter, Tyler B.; Stillman, Martin J.; Heinrichs, David E.

    2016-01-01

    Staphylococcus aureus possesses a multitude of mechanisms by which it can obtain iron during growth under iron starvation conditions. It expresses an effective heme acquisition system (the iron-regulated surface determinant system), it produces two carboxylate-type siderophores staphyloferrin A and staphyloferrin B (SB), and it expresses transporters for many other siderophores that it does not synthesize. The ferric uptake regulator protein regulates expression of genes encoding all of these systems. Mechanisms of fine-tuning expression of iron-regulated genes, beyond simple iron regulation via ferric uptake regulator, have not been uncovered in this organism. Here, we identify the ninth gene of the sbn operon, sbnI, as encoding a ParB/Spo0J-like protein that is required for expression of genes in the sbn operon from sbnD onward. Expression of sbnD–I is drastically decreased in an sbnI mutant, and the mutant does not synthesize detectable SB during early phases of growth. Thus, SB-mediated iron acquisition is impaired in an sbnI mutant strain. We show that the protein forms dimers and tetramers in solution and binds to DNA within the sbnC coding region. Moreover, we show that SbnI binds heme and that heme-bound SbnI does not bind DNA. Finally, we show that providing exogenous heme to S. aureus growing in an iron-free medium results in delayed synthesis of SB. This is the first study in S. aureus that identifies a DNA-binding regulatory protein that senses heme to control gene expression for siderophore synthesis. PMID:26534960

  20. Applicability of WRF-Lake System in Studying Reservoir-Induced Impacts on Local Climate: Case Study of Two Reservoirs with Contrasting Characteristics

    Wang, F.; Zhu, D.; Ni, G.; Sun, T.

    2017-12-01

    Large reservoirs play a key role in regional hydrological cycles as well as in modulating the local climate. The emerging large reservoirs in concomitant with rapid hydropower exploitation in southwestern China warrant better understanding of their impacts on local and regional climates. One of the crucial pathways through which reservoirs impact the climate is lake-atmospheric interaction. Although such interactions have been widely studied with numeric weather prediction (NWP) models, an outstanding limitation across various NWPs resides on the poor thermodynamic representation of lakes. The recent version of Weather Research and Forecasting (WRF) system has been equipped with a one-dimensional lake model to better represent the thermodynamics of large water body and has been shown to enhance the its predication skill in the lake-atmospheric interaction. In this study, we further explore the applicability of the WRF-Lake system in two reservoirs with contrasting characteristics: Miyun Reservoir with an average depth of 30 meters in North China Plain, and Nuozhadu Reservoir with an average depth of 200 meters in the Tibetan Plateau Region. Driven by the high spatiotemporal resolution meteorological forcing data, the WRF-Lake system is used to simulate the water temperature and surface energy budgets of the two reservoirs after the evaluation against temperature observations. The simulated results show the WRF-Lake model can well predict the vertical profile of water temperature in Miyun Reservoir, but underestimates deep water temperature and overestimates surface temperature in the deeper Nuozhadu Reservoir. In addition, sensitivity analysis indicates the poor performance of the WRF-Lake system in Nuozhadu Reservoir could be attributed to the weak vertical mixing in the model, which can be improved by tuning the eddy diffusion coefficient ke . Keywords: reservoir-induced climatic impact; lake-atmospheric interaction; WRF-Lake system; hydropower exploitation

  1. Primary studies of trace quantities of green vegetation in Mono Lake area using 1990 AVIRIS data

    Chen, Zhi-Kang; Elvidge, Chris D.; Groeneveld, David P.

    1992-01-01

    Our primary results in Jasper Ridge Biological Preserve indicate that high spectral resolution Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) data may provide a substantial advantage in vegetation, based on the chlorophyll red edge feature from 700-780 nm. The chlorophyll red edge was detected for green vegetation cover as low as 4.8 percent. The objective of our studies in Mono Lake area is to continue the experiments performed in Jasper Ridge and to examine the persistence of red edge feature of trace quantities of green vegetation for different plant communities with non-uniform soil backgrounds.

  2. The structuring role of fish in Greenland lakes: an overview based on contemporary and paleoecological studies of 87 lakes from the low and the high Arctic

    Jeppesen, Erik; Lauridsen, Torben L.; Christoffersen, Kirsten S.

    2017-01-01

    largest between fishless lakes and lakes hosting only sticklebacks (Gasterosteus aculeatus), while lakes with both Arctic charr (Salvelinus arcticus) and stickleback revealed a more modest response, indicating that presence of charr modulates the predation effect of sticklebacks. It is predicted that more...

  3. Coordination Chemistry of Linear Oligopyrrolic Fragments Inspired by Heme Metabolites

    Gautam, Ritika

    Linear oligopyrroles are degradation products of heme, which is converted in the presence of heme oxygenase to bile pigments, such as biliverdin and bilirubin. These tetrapyrrolic oligopyrroles are ubiquitously present in biological systems and find applications in the fields of catalysis and sensing. These linear tetrapyrrolic scaffolds are further degraded into linear tripyrrolic and dipyrrolic fragments. Although these lower oligopyrroles are abundantly present, their coordination chemistry requires further characterization. This dissertation focuses mainly on two classes of bioinspired linear oligopyrroles, propentdyopent and tripyrrindione, and their transition metal complexes, which present a rich ligand-based redox chemistry. Chapter 1 offers an overview of heme degradation to different classes of linear oligopyrroles and properties of their transition metal complexes. Chapter 2 is focused on the tripyrrin-1,14-dione scaffold of the urinary pigment uroerythrin, which coordinates divalent transition metals palladium and copper with square planar geometry. Specifically, the tripyrrin-1, 14-dione ligand binds Cu(II) and Pd(II) as a dianionic organic radical under ambient conditions. The electrochemical study confirms the presence of ligand based redox chemistry, and one electron oxidation or reduction reactions do not alter the planar geometry around the metal center. The X-Ray analysis and the electron paramagnetic resonance (EPR) studies of the complexes in the solid and solution phase reveals intermolecular interactions between the ligand based unpaired electrons and therefore formation of neutral pi-pi dimers. In Chapter 3, the antioxidant activity and the fluorescence sensor properties of the tripyrrin-1,14-dione ligand in the presence of superoxide are described. We found that the tripyrrindione ligand undergoes one-electron reduction in the presence of the superoxide radical anion (O2•- ) to form highly fluorescent H3TD1•- radical anion, which emits

  4. [Update on the biology of heme synthesis in erythroid cells].

    Fujiwara, Tohru; Harigae, Hideo

    2015-02-01

    Heme is a prosthetic group of hemoproteins playing important roles in oxygen transport, detoxification, circadian rhythm, microRNA processing, regulation of transcription, and translation. The majority of heme (-85%) is synthesized in red blood cells mainly for hemoglobin production, whereas hepatocytes account for most of the rest, functioning primarily in the synthesis of cytochrome P450 enzymes and mitochondrial respiratory enzymes. Thus, failure of heme biosynthesis causes severe inherited or acquired disorders in humans, including porphyria and sideroblastic anemia. The heme biosynthetic pathway is composed of eight enzymes that work in either mitochondria or the cytoplasm, which have been extensively researched and frequently reviewed. On the other hand, the mechanisms governing transport and intracellular trafficking of heme intermediates, as well as their potential links to human diseases, are poorly understood. Herein, we focus on recent understanding of the heme biosynthetic pathway and on human disorders due to defective heme synthesis in erythroid cells, such as X-linked sideroblastic anemia and erythropoietic protoporphyria.

  5. Heme requirement and intracellular trafficking in Trypanosoma cruzi epimastigotes

    Lara, F.A.; Sant'Anna, C.; Lemos, D.; Laranja, G.A.T.; Coelho, M.G.P.; Reis Salles, I.; Michel, A.; Oliveira, P.L.; Cunha-e-Silva, N.; Salmon, D.; Paes, M.C.

    2007-01-01

    Epimastigotes multiplies in the insect midgut by taking up nutrients present in the blood meal including heme bound to hemoglobin of red blood cell. During blood meal digestion by vector proteases in the posterior midgut, hemoglobin is clipped off into amino acids, peptides, and free heme. In this paper, we compared the heme and hemoglobin uptake kinetics and followed their intracellular trafficking. Addition of heme to culture medium increased epimastigote proliferation in a dose-dependent manner, while medium supplemented with hemoglobin enhanced growth after 3-day lag phase. Medium supplemented with globin-derived peptides stimulated cell proliferation in a dose-independent way. Using Palladium mesoporphyrin IX (Pd-mP) as a fluorescent heme-analog, we observed that heme internalization proceeded much faster than that observed by hemoglobin-rhodamine. Binding experiments showed that parasites accumulated the Pd-mP into the posterior region of the cell whereas hemoglobin-rhodamine stained the anterior region. Finally, using different specific inhibitors of ABC transporters we conclude that a P-glycoprotein homologue transporter is probably involved in heme transport through the plasma membrane

  6. The study of fresh-water lake ice using multiplexed imaging radar

    Leonard, Bryan M.; Larson, R.W.

    1975-01-01

    The study of ice in the upper Great Lakes, both from the operational and the scientific points of view, is receiving continued attention. Quantitative and qualitative field work is being conducted to provide the needed background for accurate interpretation of remotely sensed data. The data under discussion in this paper were obtained by a side-looking multiplexed airborne radar (SLAR) supplemented with ground-truth data.Because of its ability to penetrate adverse weather, radar is an especially important instrument for monitoring ice in the upper Great Lakes. It has previously been shown that imaging radars can provide maps of ice cover in these areas. However, questions concerning both the nature of the surfaces reflecting radar energy and the interpretation of the radar imagery continually arise.Our analysis of ice in Whitefish Bay (Lake Superior) indicates that the combination of the ice/water interlace and the ice/air interface is the major contributor to the radar backscatter as seen on the imagery At these frequencies the ice has a very low relative dielectric permittivity (types studied include newly formed black ice, pancake ice, and frozen and consolidated pack and brash ice.Although ice thickness cannot be measured directly from the received signals, it is suspected that by combining the information pertaining to radar backscatter with data on the meteorological and sea-state history of the area, together with some basic ground truth, better estimates of the ice thickness may be provided. In addition, certain ice features (e.g. ridges, ice-foot formation, areas of brash ice) may be identified with reasonable confidence. There is a continued need for additional ground work to verify the validity of imaging radars for these types of interpretations.

  7. Late Quaternary lake-level changes constrained by radiocarbon and stable isotope studies on sediment cores from Lake Titicaca, South America

    Rowe, Harold D.; Guilderson, Thomas P.; Dunbar, Robert B.; Southon, John R.; Seltzer, Geoffrey O.; Mucciarone, David A.; Fritz, Sherilyn C.; Baker, Paul A.

    2003-09-01

    developed for the Lake Titicaca sequence using different organic fractions, mobile organic sub-fractions and fractions containing mobile sub-fractions should generally be avoided in geochronology studies. Consequently, we believe humin and/or bulk decalcified ages provide the most consistent chronologies for the post-13,500 yr BP interval, and humin ages provide the most representative ages for sedimentation prior to 13,500 yr BP interval. Using the age model derived from the deep water core site and a previously published isotope-based lake-level reconstruction, we present a qualitative record of lake level in the context of several ice-core records from the western hemisphere. We find the latest Pleistocene lake-level response to changing insolation began during or just prior to the Bølling/Allerød period. Using the isotope-based lake-level reconstruction, we also find the 85-m drop in lake level that occurred during the mid-Holocene was synchronous with an increase in the variability of ice-core δ18O from a nearby icecap, but was not reflected in any of the polar ice-core records recovered from the interior of Antarctica and Greenland.

  8. Paleosecular Type Curves for South America Based on Holocene-Pleistocene Lake Sediments Studies

    Gogorza, C. S.

    2007-05-01

    Most of the high-resolution paleomagnetic secular variation (PSV) results were obtained from records on sediments from the Northern Hemisphere. Experimental results from South America are scarce. The first results were obtained by Creer et al. (1983) and have been continued since few years ago by the author and collaborators. This review deals with studies of PSV records from bottom sediments from three lakes: Escondido, Moreno and El Trébol (south-western Argentina, 41° S, 71° 30'W). Measurements of directions (declination D and inclination I) and intensity of natural remanent magnetization (NRM), magnetic susceptibility at low and high frequency (specific, X and volumetric, k), isothermal remanent magnetization (IRM), saturation isothermal remanent magnetization (SIRM), and back field were carried out. Stability of the NRM was investigated by alternating-field demagnetization. Rock magnetic studies suggest that the main carriers of magnetization are ferrimagnetic minerals, predominantly pseudo single domain magnetite. The correlation between cores was based on magnetic parameters as X and NRM. The tephra layers were identified from the lithologic profiles and also from the magnetic susceptibility logs. Due to their different chronological meaning and their rather bad behavior as magnetic recorder, these layers were removed from the sequence and the gaps that were produced along the profiles by the removal were closed, obtaining a "shortened depth". Radiocarbon age estimates from these cores and from earlier studies allow us to construct paleosecular variation records for the past 22,000 years. Inclination and declination curves (Gogorza et al., 2000a; Gogorza et al., 2002; Irurzun et al., 2006) show trends that are similar to a paleomagnetic secular variation curve for SW of Argentina (Gogorza et al., 2000b). References Creer, K.M., Tucholka, P. and Barton, C.E. 1983. Paleomagnetism of lake sediments, in Geomagnetism of Baked Clays and Recent Sediments, edited

  9. Isoporphyrin Intermediate in Heme Oxygenase Catalysis

    Evans, John P.; Niemevz, Fernando; Buldain, Graciela; de Montellano, Paul Ortiz

    2008-01-01

    Human heme oxygenase-1 (hHO-1) catalyzes the O2- and NADPH-dependent oxidation of heme to biliverdin, CO, and free iron. The first step involves regiospecific insertion of an oxygen atom at the α-meso carbon by a ferric hydroperoxide and is predicted to proceed via an isoporphyrin π-cation intermediate. Here we report spectroscopic detection of a transient intermediate during oxidation by hHO-1 of α-meso-phenylheme-IX, α-meso-(p-methylphenyl)-mesoheme-III, and α-meso-(p-trifluoromethylphenyl)-mesoheme-III. In agreement with previous experiments (Wang, J., Niemevz, F., Lad, L., Huang, L., Alvarez, D. E., Buldain, G., Poulos, T. L., and Ortiz de Montellano, P. R. (2004) J. Biol. Chem. 279, 42593–42604), only the α-biliverdin isomer is produced with concomitant formation of the corresponding benzoic acid. The transient intermediate observed in the NADPH-P450 reductase-catalyzed reaction accumulated when the reaction was supported by H2O2 and exhibited the absorption maxima at 435 and 930 nm characteristic of an isoporphyrin. Product analysis by reversed phase high performance liquid chromatography and liquid chromatography electrospray ionization mass spectrometry of the product generated with H2O2 identified it as an isoporphyrin that, on quenching, decayed to benzoylbiliverdin. In the presence of H218O2, one labeled oxygen atom was incorporated into these products. The hHO-1-isoporphyrin complexes were found to have half-lives of 1.7 and 2.4 h for the p-trifluoromethyl- and p-methyl-substituted phenylhemes, respectively. The addition of NADPH-P450 reductase to the H2O2-generated hHO-1-isoporphyrin complex produced α-biliverdin, confirming its role as a reaction intermediate. Identification of an isoporphyrin intermediate in the catalytic sequence of hHO-1, the first such intermediate observed in hemoprotein catalysis, completes our understanding of the critical first step of heme oxidation. PMID:18487208

  10. [Studies on nitrogen, phosphorus and organic matter in ponds around Chaohu Lake].

    Sun, Qing-ye; Ma, Xiu-ling; Yang, Gui-de; Chen, Zheng; Wu, Hong-lin; Xuan, Huai-xiang

    2010-07-01

    There are a lot of ponds around Chaohu Lake. According to location and runoff supply of ponds, the ponds are divided into three types: ponds inner vellage (PIV), ponds adjacent vellage (PAV) and ponds outer vellage (POV). The samples of water and sediment were collected from 136 ponds around Chaohu Lake and the contents of nitrogen, phosphorus and organic matter in water and sediments were analyzed in this study. The results showed that mean contents of total nitrogen (TN), NH4+ -N, NO3- -N, NO2- -N, total phosphorus (TP), soluble PO4(3-) -P and COD were 2.53, 0.65, 0.18, 0.02, 0.97, 0.38 and 51.58 mg x L(-1) in pond water, respectively; and mean contents of TN, NH4+ -N, NO3- -N, NO2- -N, TP, inorganic phosphorus (IP), organic phosphorus (OP) and loss of ignition (LOI) in pond sediment were 1575.36, 35.73, 13.30, 2.88, 933.19, 490.14, 414.75 mg x kg(-1) and 5.44%, respectively. The ponds of more than 90% presented eutrophication in the contents of total nitrogen and phosphorus in water. The contents of TN and NH4+ -N in water and sediment of PIV were significantly higher than that of POV. And the contents of inorganic nitrogen in pond water and sediment displayed a following order: NH4+ -N > NO3- -N > NO2- -N. Data analysis indicated that there was a significantly positive correlation between organic matter and total nitrogen and phosphorus in water and sediment. The nitrogen, phosphorus and organic matter in ponds mainly sourced farmlands and village land surface. The contents of nitrogen, phosphorus and organic matter in ponds were affected by location and runoff supply of ponds. By retaining nitrogen, phosphorus and organic matter in runoff, the ponds can effectively decrease nutrient content into Chaohu Lake.

  11. Regional distribution and relevance in paleonvironmental studies of lakes in the Tatra Mts. (Western Carpathians

    Joanna POCIASK-KARTECZKA

    2014-11-01

    Full Text Available Scientific limnological research in the Tatra Mountains were initiated by Stanislaw Staszic in the early XIX century.  After the World War II, the evolution of Tatra lakes was investigated by Kondracki, Klimaszewski, Baumgart-Kotarba and. Extensive paleolimnological investigations in the Tatra Mountains were started by the group of scientists led by K. Starmach in the beginning of the second half of the 20th century. There has been not much research concerned to the regional distribution of lakes and their properties in the Tatra Mountains (Pociask-Karteczka 2013. Very early division of lakes presented A. Gadomski (1922, which distinguished four types of lakes: a tarns (cirque lake or corrie loch, b bedrock-dammed lakes, c moraine lakes. This division was concerned in subsequent publications (Choiński 2007. M. Lukniš (1973, 1985 recognized additional types: kettles and landslide-dammed lakes and M. Klimaszewski (1988 – inter-sheepback lakes. J. Pacl and K. Wit-Jóźwik in Klima Tatier (Pacl, Wit-Jóźwik 1974 were focused on the temperature of water in lakes in Polish and Slovak parts and M. Borowiak (2000a,b provided a comprehensive analysis of types, dimensions, temperature and chemical composition of water in lakes in the Tatra Mountains.According to present day state of knowledge, one may distinguish following genetic types of lakes: I glacial, II not-glacial. There are four types of the glacial origin lakes in the Tatra Mountains (Fig. 1: a tarns (cirque lakes or corrie loch, b bedrock-moraine dammed lakes, c inter-sheepback lakes, d moraine lakes, e kettles.Most of lakes in the Tatra Mountains are tarns and bedrock-moraine dammed lakes, and they are located at the elevation over 1400 m a.s.l. in the Western Tatra Mountains, and over 1600 m a.s.l. in the High Tatra Mountains. Some of them are paternoster lakes – a series of stair-stepped lakes formed in individual rock basins aligned down the course of a glaciated valley. Lakes in

  12. Role of distal arginine in early sensing intermediates in the heme domain of the oxygen sensor FixL.

    Jasaitis, Audrius; Hola, Klara; Bouzhir-Sima, Latifa; Lambry, Jean-Christophe; Balland, Veronique; Vos, Marten H; Liebl, Ursula

    2006-05-16

    FixL is a bacterial heme-based oxygen sensor, in which release of oxygen from the sensing PAS domain leads to activation of an associated kinase domain. Static structural studies have suggested an important role of the conserved residue arginine 220 in signal transmission at the level of the heme domain. To assess the role of this residue in the dynamics and properties of the initial intermediates in ligand release, we have investigated the effects of R220X (X = I, Q, E, H, or A) mutations in the FixLH heme domain on the dynamics and spectral properties of the heme upon photolysis of O(2), NO, and CO using femtosecond transient absorption spectroscopy. Comparison of transient spectra for CO and NO dissociation with steady-state spectra indicated less strain on the heme in the ligand dissociation species for all mutants compared to the wild type (WT). For CO and NO, the kinetics were similar to those of the wild type, with the exception of (1) a relatively low yield of picosecond NO rebinding to R220A, presumably related to the increase in the free volume of the heme pocket, and (2) substantial pH-dependent picosecond to nanosecond rebinding of CO to R220H, related to formation of a hydrogen bond between CO and histidine 220. Upon excitation of the complex bound with the physiological sensor ligand O(2), a 5-8 ps decay phase and a nondecaying (>4 ns) phase were observed for WT and all mutants. The strong distortion of the spectrum associated with the decay phase in WT is substantially diminished in all mutant proteins, indicating an R220-induced role of the heme in the primary intermediate in signal transmission. Furthermore, the yield of dissociated oxygen after this phase ( approximately 10% in WT) is increased in all mutants, up to almost unity in R220A, indicating a key role of R220 in caging the oxygen near the heme through hydrogen bonding. Molecular dynamics simulations corroborate these findings and suggest motions of O(2) and arginine 220 away from the heme

  13. Wearing red for signaling: the heme-bach axis in heme metabolism, oxidative stress response and iron immunology.

    Igarashi, Kazuhiko; Watanabe-Matsui, Miki

    2014-04-01

    The connection between gene regulation and metabolism is an old issue that warrants revisiting in order to understand both normal as well as pathogenic processes in higher eukaryotes. Metabolites affect the gene expression by either binding to transcription factors or serving as donors for post-translational modification, such as that involving acetylation and methylation. The focus of this review is heme, a prosthetic group of proteins that includes hemoglobin and cytochromes. Heme has been shown to bind to several transcription factors, including Bach1 and Bach2, in higher eukaryotes. Heme inhibits the transcriptional repressor activity of Bach1, resulting in the derepression of its target genes, such as globin in erythroid cells and heme oxygenase-1 in diverse cell types. Since Bach2 is important for class switch recombination and somatic hypermutation of immunoglobulin genes as well as regulatory and effector T cell differentiation and the macrophage function, the heme-Bach2 axis may regulate the immune response as a signaling cascade. We discuss future issues regarding the topic of the iron/heme-gene regulation network based on current understanding of the heme-Bach axis, including the concept of "iron immunology" as the synthesis of the iron metabolism and the immune response.

  14. Pilot-scale tests of HEME and HEPA dissolution process

    Qureshi, Z.H.; Strege, D.K.

    1994-06-01

    A series of pilot-scale demonstration tests for the dissolution of High Efficiency Mist Eliminators (HEME's) and High Efficiency Particulate Airfilters (HEPA) were performed on a 1/5th linear scale. These fiberglass filters are to be used in the Defense Waste Processing Facility (DWPF) to decontaminate the effluents from the off-gases generated during the feed preparation process and vitrification. When removed, these filters will be dissolved in the Decontamination Waste Treatment Tank (DWTT) using 5 wt% NaOH solution. The contaminated fiberglass is converted to an aqueous stream which will be transferred to the waste tanks. The filter metal structure will be rinsed with process water before its disposal as low-level solid waste. The pilot-scale study reported here successfully demonstrated a simple one step process using 5 wt% NaOH solution. The proposed process requires the installation of a new water spray ring with 30 nozzles. In addition to the reduced waste generated, the total process time is reduced to 48 hours only (66% saving in time). The pilot-scale tests clearly demonstrated that the dissolution process of HEMEs has two stages - chemical digestion of the filter and mechanical erosion of the digested filter. The digestion is achieved by a boiling 5 wt% caustic solutions, whereas the mechanical break down of the digested filter is successfully achieved by spraying process water on the digested filter. An alternate method of breaking down the digested filter by increased air sparging of the solution was found to be marginally successful are best. The pilot-scale tests also demonstrated that the products of dissolution are easily pumpable by a centrifugal pump

  15. Water and chemical budgets of gravel pit lakes : Case studies of fluvial gravel pit lakes along the Meuse River (The Netherlands) and coastal gravel pit lakes along the Adriatic Sea (Ravenna, Italy)

    Mollema, P.N.

    2016-01-01

    Gravel pit lakes form when gravel is excavated from below the water table of a phreatic or shallow confined aquifer. Typically many of these lakes are concentrated along naturally occurring sedimentary gravel deposits in areas where gravel is needed for construction. Most gravel pit lakes are

  16. Functional microbiology of soda lakes

    Sorokin, D.Y.; Banciu, H.L.; Muyzer, G.

    2015-01-01

    Soda lakes represent unique permanently haloalkaline system. Despite the harsh conditions, they are inhabited by abundant, mostly prokaryotic, microbial communities. This review summarizes results of studies of main functional groups of the soda lake prokaryotes responsible for carbon, nitrogen and

  17. Introduction of a covalent histidine-heme linkage in a hemoglobin: a promising tool for heme protein engineering.

    Rice, Selena L; Preimesberger, Matthew R; Johnson, Eric A; Lecomte, Juliette T J

    2014-12-01

    The hemoglobins of the cyanobacteria Synechococcus and Synechocystis (GlbNs) are capable of spontaneous and irreversible attachment of the b heme to the protein matrix. The reaction, which saturates the heme 2-vinyl by addition of a histidine residue, is reproduced in vitro by preparing the recombinant apoprotein, adding ferric heme, and reducing the iron to the ferrous state. Spontaneous covalent attachment of the heme is potentially useful for protein engineering purposes. Thus, to explore whether the histidine-heme linkage can serve in such applications, we attempted to introduce it in a test protein. We selected as our target the heme domain of Chlamydomonas eugametos LI637 (CtrHb), a eukaryotic globin that exhibits less than 50% sequence identity with the cyanobacterial GlbNs. We chose two positions, 75 in the FG corner and 111 in the H helix, to situate a histidine near a vinyl group. We characterized the proteins with gel electrophoresis, absorbance spectroscopy, and NMR analysis. Both T111H and L75H CtrHbs reacted upon reduction of the ferric starting material containing cyanide as the distal ligand to the iron. With L75H CtrHb, nearly complete (>90%) crosslinking was observed to the 4-vinyl as expected from the X-ray structure of wild-type CtrHb. Reaction of T111H CtrHb also occurred at the 4-vinyl, in a 60% yield indicating a preference for the flipped heme orientation in the starting material. The work suggests that the His-heme modification will be applicable to the design of proteins with a non-dissociable heme group. Copyright © 2014 Elsevier Inc. All rights reserved.

  18. Total Energy Recovery System for Agribusiness: Lake County study. Final report

    Fogleman, S.F.; Fisher, L.A.; Black, A.R.

    1978-04-01

    A brief summary is given of the results of a previously reported study designed to evaluate the costs and viability of combined thermodynamic and biologic cycles in a system known as the Total Energy Recovery System for Agribusiness (TERSA). This conceptual system involved the combined geothermally assisted activities of greenhouse crop and mushroom growing, fish farming, and biogas generation in an integrated biologic system such that the waste or by-products of each subsystem cycle were recovered to service input needs of companion cycles. An updated direct use geothermal system based on TERSA that is viable for implementation in Lake County is presented. Particular consideration is given to: location of geothermal resources, availability of land and irrigation quality water, compatibility of the specific direct use geothermal activities with adjacent and local uses. Private interest and opposition, and institutional factors as identified. Factors relevant to local TERSA implementation are discussed, followed by sites considered, selection criteria, site slection, and the modified system resulting. Particular attention is paid to attempt to make clear the process followed in applying this conceptual design to the specific task of realistic local implementation. Previous publications on geothermal energy and Lake County are referenced where specific details outside the scope of this study may be found. (JGB)

  19. Implication for using heme methyl hyperfine shifts as indicators of heme seating as related to stereoselectivity in the catabolism of heme by heme oxygenase: in-plane heme versus axial his rotation.

    Ogura, Hiroshi; Evans, John P; de Montellano, Paul R Ortiz; La Mar, Gerd N

    2008-01-08

    The triple mutant of the solubilized, 265-residue construct of human heme oxygenase, K18E/E29K/R183E-hHO, has been shown to redirect the exclusive alpha-regioselectivity of wild-type hHO to primarily beta,delta-selectivity in the cleavage of heme (Wang, J., Evans, J. P., Ogura, H., La Mar, G. N., and Ortiz de Montellano, P. R. (2006) Biochemistry 45, 61-73). The 1H NMR hyperfine shift pattern for the substrate and axial His CbetaH's and the substrate-protein contacts of the cyanide-inhibited protohemin and 2,4-dimethyldeuterohemin complexes of the triple mutant have been analyzed in detail and compared to data for the WT complex. It is shown that protein contacts for the major solution isomers for both substrates in the mutant dictate approximately 90 degrees in-plane clockwise rotation relative to that in the WT. The conventional interpretation of the pattern of substrate methyl hyperfine shifts, however, indicates substrate rotations of only approximately 50 degrees . This paradox is resolved by demonstrating that the axial His25 imidazole ring also rotates counterclockwise with respect to the protein matrix in the mutant relative to that in the WT. The axial His25 CbetaH hyperfine shifts are shown to serve as independent probes of the imidazole plane orientation relative to the protein matrix. The analysis indicates that the pattern of heme methyl hyperfine shifts cannot be used alone to determine the in-plane orientation of the substrate as it relates to the stereospecificity of heme cleavage, without explicit consideration of the orientation of the axial His imidazole plane relative to the protein matrix.

  20. Stable lead isotopes and lake sediments. A useful combination for the study of atmospheric lead pollution history

    Renberg, I.; Braennvall, M.-L.; Bindler, R. [Department of Ecology and Environmental Science, Umea University, SE-901 87 Umea (Sweden); Emteryd, O. [Department of Forest Ecology, Swedish University of Agricultural Sciences, SE-901 83 Umea (Sweden)

    2002-06-20

    Analysis of stable lead isotopes and lead concentrations in lake-sediment deposits, not least in varved (annually-laminated) sediments, is a useful method to study lead pollution history. This paper presents details from a study of 31 lakes in Sweden. Using a strong acid digestion of sediment samples and ICP-MS analyses, we have found that Swedish lake sediments have a high natural (pre-pollution) 206[Pb]/207[Pb] ratio (mean 1.52{+-}0.18, range 1.28-2.01, n=31 lakes). In contrast, atmospheric lead pollution derived from metal smelting processes, coal burning and from alkyl-lead added to petrol has a lower ratio (<1.2). Consequently, when pollution lead deposition began approximately 3500 years ago, the lead isotope ratio of the sediments started to decline, and in modern sediments it is typically <1.2. Using the isotope and concentration values and a mixing model, the relative contribution of pollution and natural lead in sediment samples can be calculated. The pollution lead records of the Swedish lake sediments show a consistent picture of the atmospheric lead pollution history. Some noticeable features are the Roman peak, the large and permanent Medieval increase, peaks at approximately 1200 and 1530 ad, the rapid increase after World War II, the peak in the 1970s, and the large modern decline.

  1. A radioanalytical study of radionuclides in a dysoligotrophic lake in Southern Sweden

    Eriksson, M.; Roos, P.; Holm, E.; Peck, G.

    1998-01-01

    Unusually high activity concentration of various artificial radionuclides (from nuclear test fallout and the Chernobyl accident) and some natural radionuclides, have been discovered in lakes with high amounts of humic substances. These lakes tend to have low pH, at times down to pH 5. The lake, Svartsjoen, in the southern part of Sweden is one of these lakes. The food chain and resulting concentration factors in Svartsjoen were investigated and compared to results for other 'normal' lakes. Fish and water samples were collected and analysed for 137 Cs 239+240 Pu, 241 Am and 210 Po during a 4-month visit to Lund. The level of 239/240 Pu in the water of Svartsjoen was found to be elevated. The work on fish from the lake indicates that these elevated levels are not transferred into the food chain. It appears that the humic substances could be blocking plutonium from entering the food chain

  2. Isotope method to study the replenishment the lakes and downstream groundwater in Badain Jaran desert

    Chen Jiansheng; Fan Zhechao; Gu Weizu; Zhao Xia; Wang Jiyang

    2003-01-01

    In the paper, the sources of spring water and well water of Qilian Mountain's north side, Longshou Mountain, Badain Jaran Desert, Gurinai, Guaizi Lake, and Ejina Basin are studied by the methods of environmental isotopes and water chemistry. The groundwater of downstream areas (such as Badain Jaran Desert) is found that it is recharged by the precipitation of Qilian Mountain, and the average recharge elevation is 3300 m. Lots of naked limestones layers exist at the mountaintop of Qilian Mountain. The snow water of Qilian Mountain melts and directly infiltrates into deep layer passing through karst stratum or Big Fault in Front of the Mountain, and directly recharges into Badain Jaran Desert and its downstream areas passing through Longshou Mountain. The calcareous cementation and travertine, found in the lakes of the desert, approve that the groundwater passed the limestone layer. Confined water recharges shallow aquifer by means of leakage. The groundwater recharge volume is six hundreds millions cubic meters per year by calculating the evaporation amount, and the age of confined groundwater is 20-30 years. (authors)

  3. Replicated mesocosm study on the role of natural ultraviolet radiation in high CDOM, shallow lakes.

    Pérez, A Patricia; Diaz, Mónica M; Ferraro, Marcela A; Cusminsky, Gabriela C; Zagarese, Horacio E

    2003-02-01

    The role of ultraviolet radiation on shallow, high CDOM (colored dissolved organic matter) lakes was investigated during two consecutive summers (1999 and 2000) in replicated mesocosms (rectangular fiberglass tanks). Each tank (volume: 300 L; depth: 40 cm) was covered with a layer (approximately 3 cm) of sediment from lake El Toro (40 degrees 14' S; 70 degrees 22' W) and filled with filtered water. The experimental design consisted of two treatments: full natural radiation (UV-exposed) and natural radiation without ultraviolet radiation (UV-shielded). UV-exposed and UV-shielded treatments differed in most studied variables as revealed by repeated measures ANOVA. UV-exposed tanks displayed lower CDOM levels (dissolved absorbance) of lower average molecular size (absorbance ratio between 250 and 365 nm), higher bacterial biomass, and lower chlorophyll a concentration. The effect on consumers (rotifers and crustaceans) was less noticeable. The results are consistent with UV stimulation of bacteria production mediated by higher rates of CDOM photobleaching, and the photoinhibition of planktonic algae. Thus, a major effect of UVR in shallow, high CDOM ecosystems appears to be the stimulation of heterotrophic pathways and a simultaneous inhibition of photoautotrophs.

  4. Glacial lake inventory and lake outburst potential in Uzbekistan.

    Petrov, Maxim A; Sabitov, Timur Y; Tomashevskaya, Irina G; Glazirin, Gleb E; Chernomorets, Sergey S; Savernyuk, Elena A; Tutubalina, Olga V; Petrakov, Dmitriy A; Sokolov, Leonid S; Dokukin, Mikhail D; Mountrakis, Giorgos; Ruiz-Villanueva, Virginia; Stoffel, Markus

    2017-08-15

    Climate change has been shown to increase the number of mountain lakes across various mountain ranges in the World. In Central Asia, and in particular on the territory of Uzbekistan, a detailed assessment of glacier lakes and their evolution over time is, however lacking. For this reason we created the first detailed inventory of mountain lakes of Uzbekistan based on recent (2002-2014) satellite observations using WorldView-2, SPOT5, and IKONOS imagery with a spatial resolution from 2 to 10m. This record was complemented with data from field studies of the last 50years. The previous data were mostly in the form of inventories of lakes, available in Soviet archives, and primarily included localized in-situ data. The inventory of mountain lakes presented here, by contrast, includes an overview of all lakes of the territory of Uzbekistan. Lakes were considered if they were located at altitudes above 1500m and if lakes had an area exceeding 100m 2 . As in other mountain regions of the World, the ongoing increase of air temperatures has led to an increase in lake number and area. Moreover, the frequency and overall number of lake outburst events have been on the rise as well. Therefore, we also present the first outburst assessment with an updated version of well-known approaches considering local climate features and event histories. As a result, out of the 242 lakes identified on the territory of Uzbekistan, 15% are considered prone to outburst, 10% of these lakes have been assigned low outburst potential and the remainder of the lakes have an average level of outburst potential. We conclude that the distribution of lakes by elevation shows a significant influence on lake area and hazard potential. No significant differences, by contrast, exist between the distribution of lake area, outburst potential, and lake location with respect to glaciers by regions. Copyright © 2017 Elsevier B.V. All rights reserved.

  5. Effect of a heme oxygenase-1 inducer on NADPH oxidase ...

    Effect of a heme oxygenase-1 inducer on NADPH oxidase expression in ... and immunohistochemistry of hepatic NOX1 and NOX4 were investigated in week 4. ... (HO-1 inhibitor) administration caused upregulation of NOX gene expression ...

  6. Heme and blood-feeding parasites: friends or foes?

    Glanfield Amber

    2010-11-01

    Full Text Available Abstract Hemoparasites, like malaria and schistosomes, are constantly faced with the challenges of storing and detoxifying large quantities of heme, released from their catabolism of host erythrocytes. Heme is an essential prosthetic group that forms the reactive core of numerous hemoproteins with diverse biological functions. However, due to its reactive nature, it is also a potentially toxic molecule. Thus, the acquisition and detoxification of heme is likely to be paramount for the survival and establishment of parasitism. Understanding the underlying mechanism involved in this interaction could possibly provide potential novel targets for drug and vaccine development, and disease treatment. However, there remains a wide gap in our understanding of these mechanisms. This review summarizes the biological importance of heme for hemoparasite, and the adaptations utilized in its sequestration and detoxification.

  7. Heme and blood-feeding parasites: friends or foes?

    2010-01-01

    Hemoparasites, like malaria and schistosomes, are constantly faced with the challenges of storing and detoxifying large quantities of heme, released from their catabolism of host erythrocytes. Heme is an essential prosthetic group that forms the reactive core of numerous hemoproteins with diverse biological functions. However, due to its reactive nature, it is also a potentially toxic molecule. Thus, the acquisition and detoxification of heme is likely to be paramount for the survival and establishment of parasitism. Understanding the underlying mechanism involved in this interaction could possibly provide potential novel targets for drug and vaccine development, and disease treatment. However, there remains a wide gap in our understanding of these mechanisms. This review summarizes the biological importance of heme for hemoparasite, and the adaptations utilized in its sequestration and detoxification. PMID:21087517

  8. Dynamics of lake Koeycegiz, SW Turkey: An environmental isotopic and hydrochemical study

    Bayari, C.S.; Kurttas, T.; Tezcan, L.

    2001-01-01

    Lake Koeycegiz, located in southwestern Turkey, is a meromictic lake with a surface area of 55 km 2 . Impermeable ophiolitic rocks, and groundwater bearing alluvium and karstified limestone are the major geologic units around the lake. Lake Koeycegiz, fed mainly by rainfall and stream flow, discharges into the Mediterranean Sea via a 14 km long natural channel. The average water level is estimated to be slightly above the sea level and the estimated lake volume is 826 million m 3 . Lake level fluctuations are well correlated with rainfall intensity. Lake Koeycegiz comprises two major basins: Sultaniye basin (-32m) at the south and Koeycegiz Basin (-24m) at the north which are connected by a 12m deep strait. Environmental isotopic and chemical data reveals that the Lake Koeycegiz has complicated mixing dynamics which are controlled mainly by density-driven flow of waters from different origins. The lake is fed mainly by rainfall and stream flow as low density waters and by high density thermal groundwater inflow at the southern coast. Complete annual mixing cannot be achieved, because of the density difference between mixolimnion and recharge. Continuous high-density thermal water input into the Sultaniye basin is the major factor controlling the lake dynamics. The high density thermal groundwater discharging into the lake sinks to the bottom of Sultaniye basin and overflows toward the north along the bottom surface. During its travel, dense bottom water is mixed with mixolimnion water and as the distance from the thermal water inflow increases, the density tends to decrease throughout the lake. Calculations based on long-term average electrical conductivity data reveal that about 60% of mixolimnion in both basins is replenished annually, whereas the annual mixing with mixolinmion for Sultaniye and Koeycegiz Basins is 20% and 30%, respectively. Turnover times for mixolimnion and monimolimnions of Sultaniye and Koeycegiz Basins are estimated to be 2 years, 5 years

  9. Preliminary Study of the Effect of the Proposed Long Lake Valley Project Operation on the Transport of Larval Suckers in Upper Klamath Lake, Oregon

    Wood, Tamara M.

    2009-01-01

    A hydrodynamic model of Upper Klamath and Agency Lakes, Oregon, was used to explore the effects of the operation of proposed offstream storage at Long Lake Valley on transport of larval suckers through the Upper Klamath and Agency Lakes system during May and June, when larval fish leave spawning sites in the Williamson River and springs along the eastern shoreline and become entrained in lake currents. A range in hydrologic conditions was considered, including historically high and low outflows and inflows, lake elevations, and the operation of pumps between Upper Klamath Lake and storage in Long Lake Valley. Two wind-forcing scenarios were considered: one dominated by moderate prevailing winds and another dominated by a strong reversal of winds from the prevailing direction. On the basis of 24 model simulations that used all combinations of hydrology and wind forcing, as well as With Project and No Action scenarios, it was determined that the biggest effect of project operations on larval transport was the result of alterations in project management of the elevation in Upper Klamath Lake and the outflow at the Link River and A Canal, rather than the result of pumping operations. This was because, during the spring time period of interest, the amount of water pumped between Upper Klamath Lake and Long Lake Valley was generally small. The dominant effect was that an increase in lake elevation would result in more larvae in the Williamson River delta and in Agency Lake, an effect that was enhanced under conditions of wind reversal. A decrease in lake elevation accompanied by an increase in the outflow at the Link River had the opposite effect on larval concentration and residence time.

  10. Lake Michigan lake trout PCB model forecast post audit

    Scenario forecasts for total PCBs in Lake Michigan (LM) lake trout were conducted using the linked LM2-Toxics and LM Food Chain models, supported by a suite of additional LM models. Efforts were conducted under the Lake Michigan Mass Balance Study and the post audit represents th...

  11. The study of distribution and forms of uranium occurrences in Lake Baikal sediments by the SSNTD method

    Zhmodik, S.M.; Verkhovtseva, N.V.; Soloboeva, E.V.; Mironov, A.G.; Nemirovskaya, N.A.; Ilic, R.; Khlystov, O.M.; Titov, A.T.

    2005-01-01

    Sediments of Lake Baikal drill cores VER-96-1 St8 TW2 (53 deg. 32 ' 15 ' 'E; 107 deg. 56 ' 25 ' 'N) (interval 181.8-235cm from the sediment surface) were studied by means of SSNTD with the aim of defining uranium occurrence in the sediments and the uranium concentration. The neutron-fission ((n,f)-autoradiographic) method allowed a detailed study of uranium distribution of these Lake Baikal sediments within the Academicheskiy Ridge. Layered accumulations of uranium-bearing grained phosphorite, uranium-bearing particles of organic material, and abnormal uranium concentration in diatomite of unknown origin were discovered

  12. Moessbauer spectroscopic evidence on the heme binding to the proximal histidine in unfolded carbonmonoxy myoglobin by guanidine hydrochloride

    Harami, Taikan, E-mail: harami.taikan@jaea.go.jp [Japan Atomic Energy Agency (Japan); Kitao, Shinji; Kobayashi, Yasuhiro [Kyoto University, Research Reactor Institute (Japan); Mitsui, Takaya [Japan Atomic Energy Agency (Japan)

    2008-01-15

    The unfolded heme structure in myoglobin is controversial because of no chance of direct X-ray structure analyses. The unfolding of carbonmonoxy myoglobin (MbCO) by guanidine hydrochloride (GdnHCl) was studied by the Moessbauer spectroscopy. The spectra show the presence of a sort of spectrum in the unfolded MbCO, independent on the concentration of GdnHCl from 1 to 6 M and the increase of the fraction of unfolded MbCO, depending on the GdnHCl concentration. The isomer shift of the iron of heme in the unfolded MbCO was identified to be different from that of the native MbCO as the globin structure in Mb collapses under the unfolded conditions. This result and the existing related Moessbauer data proved that the heme in the unfolded MbCO may remain coordinated to the proximal histidine.

  13. Water quality monitoring: A comparative case study of municipal and Curtin Sarawak's lake samples

    Kumar, A Anand; Prabakaran, K; Nagarajan, R; Jaison, J; Chan, Y S

    2016-01-01

    In this study, particle size distribution and zeta potential of the suspended particles in municipal water and lake surface water of Curtin Sarawak's lake were compared and the samples were analysed using dynamic light scattering method. High concentration of suspended particles affects the water quality as well as suppresses the aquatic photosynthetic systems. A new approach has been carried out in the current work to determine the particle size distribution and zeta potential of the suspended particles present in the water samples. The results for the lake samples showed that the particle size ranges from 180nm to 1345nm and the zeta potential values ranges from -8.58 mV to -26.1 mV. High zeta potential value was observed in the surface water samples of Curtin Sarawak's lake compared to the municipal water. The zeta potential values represent that the suspended particles are stable and chances of agglomeration is lower in lake water samples. Moreover, the effects of physico-chemical parameters on zeta potential of the water samples were also discussed. (paper)

  14. Final report of the AECL/SKB Cigar Lake analog study. AECL research No. AECL-10851

    Cramer, J J; Smellie, J A.T. [eds.

    1994-07-15

    AECL has conducted natural analog studies on the Cigar Lake uranium deposit in northern Saskatchewan since 1984 as part of the Canadian Nuclear Fuel Waste Management Program. This report provides background information and summarizes the results of the study, emphasizing the analog aspects and the implications of modelling activities related to the performance assessment of disposal concepts for nuclear fuel wastes developed in both Canada and Sweden. The study was undertaken to obtain an understanding of the process involved in, and the effects of, steady-state water-rock interaction and trace-element migration in and around the deposit, including paleo-migration processes since the deposit was formed. To achieve these objectives, databases and models were produced to evaluate the equilibrium thermodynamic codes and databases; the role of colloids, organics, and microbes in transport processes for radionuclides; and the stability of UO2 and the influence of radiolysis on UO2 dissolution and radionuclide migration.

  15. Synthetic heme/copper assemblies: toward an understanding of cytochrome c oxidase interactions with dioxygen and nitrogen oxides.

    Hematian, Shabnam; Garcia-Bosch, Isaac; Karlin, Kenneth D

    2015-08-18

    Our long-time niche in synthetic biological inorganic chemistry has been to design ligands and generate coordination complexes of copper or iron ions or both, those reacting with dioxygen (O2) or nitrogen oxides (e.g., nitric oxide (NO(g)) and nitrite (NO2(-))) or both. As inspiration for this work, we turn to mitochondrial cytochrome c oxidase, which is responsible for dioxygen consumption and is also the predominant target for NO(g) and nitrite within mitochondria. In this Account, we highlight recent advances in studying synthetic heme/Cu complexes in two respects. First, there is the design, synthesis, and characterization of new O2 adducts whose further study will add insights into O2 reductive cleavage chemistry. Second, we describe how related heme/Cu constructs reduce nitrite ion to NO(g) or the reverse, oxidize NO(g) to nitrite. The reactions of nitrogen oxides occur as part of CcO's function, which is intimately tied to cellular O2 balance. We had first discovered that reduced heme/Cu compounds react with O2 giving μ-oxo heme-Fe(III)-O-Cu(II)(L) products; their properties are discussed. The O-atom is derived from dioxygen, and interrogations of these systems led to the construction and characterization of three distinctive classes of heme-peroxo complexes, two high-spin and one low-spin species. Recent investigations include a new approach to the synthesis of low-spin heme-peroxo-Cu complexes, employing a "naked" synthon, where the copper ligand denticity and geometric types can be varied. The result is a collection of such complexes; spectroscopic and structural features (by DFT calculations) are described. Some of these compounds are reactive toward reductants/protons effecting subsequent O-O cleavage. This points to how subtle improvements in ligand environment lead to a desired local structure and resulting optimized reactivity, as known to occur at enzyme active sites. The other sector of research is focused on heme/Cu assemblies mediating the redox

  16. Acquisition of iron from transferrin regulates reticulocyte heme synthesis

    Ponka, P.; Schulman, H.M.

    1985-01-01

    Fe-salicylaldehyde isonicotinoylhydrazone (SIH), which can donate iron to reticulocytes without transferrin as a mediator, has been utilized to test the hypothesis that the rate of iron uptake from transferrin limits the rate of heme synthesis in erythroid cells. Reticulocytes take up 59 Fe from [ 59 Fe]SIH and incorporate it into heme to a much greater extent than from saturating concentrations of [ 59 Fe]transferrin. Also, Fe-SIH stimulates [2- 14 C]glycine into heme when compared to the incorporation observed with saturating levels of Fe-transferrin. In addition, delta-aminolevulinic acid does not stimulate 59 Fe incorporation into heme from either [ 59 Fe]transferrin or [ 59 Fe]SIH but does reverse the inhibition of 59 Fe incorporation into heme caused by isoniazid, an inhibitor of delta-aminolevulinic acid synthase. Taken together, these results suggest the hypothesis that some step(s) in the pathway of iron from extracellular transferrin to intracellular protoporphyrin limits the overall rate of heme synthesis in reticulocytes

  17. TMEM14C is required for erythroid mitochondrial heme metabolism.

    Yien, Yvette Y; Robledo, Raymond F; Schultz, Iman J; Takahashi-Makise, Naoko; Gwynn, Babette; Bauer, Daniel E; Dass, Abhishek; Yi, Gloria; Li, Liangtao; Hildick-Smith, Gordon J; Cooney, Jeffrey D; Pierce, Eric L; Mohler, Kyla; Dailey, Tamara A; Miyata, Non; Kingsley, Paul D; Garone, Caterina; Hattangadi, Shilpa M; Huang, Hui; Chen, Wen; Keenan, Ellen M; Shah, Dhvanit I; Schlaeger, Thorsten M; DiMauro, Salvatore; Orkin, Stuart H; Cantor, Alan B; Palis, James; Koehler, Carla M; Lodish, Harvey F; Kaplan, Jerry; Ward, Diane M; Dailey, Harry A; Phillips, John D; Peters, Luanne L; Paw, Barry H

    2014-10-01

    The transport and intracellular trafficking of heme biosynthesis intermediates are crucial for hemoglobin production, which is a critical process in developing red cells. Here, we profiled gene expression in terminally differentiating murine fetal liver-derived erythroid cells to identify regulators of heme metabolism. We determined that TMEM14C, an inner mitochondrial membrane protein that is enriched in vertebrate hematopoietic tissues, is essential for erythropoiesis and heme synthesis in vivo and in cultured erythroid cells. In mice, TMEM14C deficiency resulted in porphyrin accumulation in the fetal liver, erythroid maturation arrest, and embryonic lethality due to profound anemia. Protoporphyrin IX synthesis in TMEM14C-deficient erythroid cells was blocked, leading to an accumulation of porphyrin precursors. The heme synthesis defect in TMEM14C-deficient cells was ameliorated with a protoporphyrin IX analog, indicating that TMEM14C primarily functions in the terminal steps of the heme synthesis pathway. Together, our data demonstrate that TMEM14C facilitates the import of protoporphyrinogen IX into the mitochondrial matrix for heme synthesis and subsequent hemoglobin production. Furthermore, the identification of TMEM14C as a protoporphyrinogen IX importer provides a genetic tool for further exploring erythropoiesis and congenital anemias.

  18. Lake ecosystem response to climate change 8200 years ago. A multi-proxy study at Lake Højby Sø, Denmark

    Rasmussen, Peter; Hede, Mikkel Ulfeldt; Noe-Nygaard, Nanna

    2009-01-01

    of climate and the effects of human activities. These problems also complicate the prediction of possible future climate influence on lake ecology. A way of circumventing these problems is the use of lake sediment records which contain a wealth of information about past lake history over long time scales...... productivity as reflected by high algal pigment accumulation rates in the period c. 8400–7950 cal yr BP. After c. 7950 cal yr BP algal productivity declined somewhat but the lake did not return to its pre-8400 cal yr BP conditions remaining a more productive and nutrient rich lake than before the climate...... was of more importance for lake ecosystem process than the change in air temperature....

  19. CYB5D2 requires heme-binding to regulate HeLa cell growth and confer survival from chemotherapeutic agents.

    Anthony Bruce

    Full Text Available The cytochrome b5 domain containing 2 (CYB5D2; Neuferricin protein has been reported to bind heme, however, the critical residues responsible for heme-binding are undefined. Furthermore, the relationship between heme-binding and CYB5D2-mediated intracellular functions remains unknown. Previous studies examining heme-binding in two cytochrome b5 heme-binding domain-containing proteins, damage-associated protein 1 (Dap1; Saccharomyces cerevisiae and human progesterone receptor membrane component 1 (PGRMC1, have revealed that conserved tyrosine (Y 73, Y79, aspartic acid (D 86, and Y127 residues present in human CYB5D2 may be involved in heme-binding. CYB5D2 binds to type b heme, however, only the substitution of glycine (G at D86 (D86G within its cytochrome b5 heme-binding (cyt-b5 domain abolished its heme-binding ability. Both CYB5D2 and CYB5D2(D86G localize to the endoplasmic reticulum. Ectopic CYB5D2 expression inhibited cell proliferation and anchorage-independent colony growth of HeLa cells. Conversely, CYB5D2 knockdown and ectopic CYB5D2(D86G expression increased cell proliferation and colony growth. As PGRMC1 has been reported to regulate the expression and activities of cytochrome P450 proteins (CYPs, we examined the role of CYB5D2 in regulating the activities of CYPs involved in sterol synthesis (CYP51A1 and drug metabolism (CYP3A4. CYB5D2 co-localizes with cytochrome P450 reductase (CYPOR, while CYB5D2 knockdown reduced lanosterol demethylase (CYP51A1 levels and rendered HeLa cells sensitive to mevalonate. Additionally, knockdown of CYB5D2 reduced CYP3A4 activity. Lastly, CYB5D2 expression conferred HeLa cell survival from chemotherapeutic agents (paclitaxel, cisplatin and doxorubicin, with its ability to promote survival being dependent on its heme-binding ability. Taken together, this study provides evidence that heme-binding is critical for CYB5D2 in regulating HeLa cell growth and survival, with endogenous CYB5D2 being required to

  20. Inclusive business model in tapioca starch industry in Lake Toba area: a case study

    Tampubolon, S.; Manik, Y.

    2018-04-01

    The notion of inclusive business calls for additional focus and innovation in the way companies do business which seeks to contribute to poverty alleviation by including Bottom of the Pyramids (BoP) communities within its value chain while not losing sight of the ultimate goal of business. Lake Toba Area has potentials in providing chances for doing businesses. On the other hand, the growth of market size is rather slow and demographically still dominated by BoP. This is a case study which seeks to investigate to what extent the Inclusive Business Model (IBM) is adopted in the strategic planning and applied in the operational management of companies that operate in Lake Toba Area. The study was conducted in qualitative basis. The observation was conducted by gathering data and information through a series of interviews with the top management and desk study of the business plan in a tapioca starch industry in Toba Samosir Regency. The collected data and information were then analyzed qualitatively by comparing them with criteria and parameters of IBM suggested in a vast body of literature. The reference by which the IBM is referred in this study is a series of criteria which is synthesized from a literature review on a vast body of literature about IBM. From data analysis, it is evident that IBM has been incorporated in the strategic plan and applied in the operational activities of the object of this study. However, we also found some rooms for improvement such as expanding the involvement of BoP in their value chain as consumers, by which some innovation in the product diversification is required.

  1. Contaminants of emerging concern presence and adverse effects in fish: A case study in the Laurentian Great Lakes

    Jorgenson, Zachary G.; Thomas, Linnea M.; Elliott, Sarah M.; Cavallin, Jenna E.; Randolph, Eric C.; Choy, Steven J.; Alvarez, David; Banda, Jo A.; Gefell, Daniel J.; Lee, Kathy E.; Furlong, Edward T.; Schoenfuss, Heiko L.

    2018-01-01

    The Laurentian Great Lakes are a valuable natural resource that is affected by contaminants of emerging concern (CECs), including sex steroid hormones, personal care products, pharmaceuticals, industrial chemicals, and new generation pesticides. However, little is known about the fate and biological effects of CECs in tributaries to the Great Lakes. In the current study, 16 sites on three rivers in the Great Lakes basin (Fox, Cuyahoga, and Raquette Rivers) were assessed for CEC presence using polar organic chemical integrative samplers (POCIS) and grab water samplers. Biological activity was assessed through a combination of in vitro bioassays (focused on estrogenic activity) and in vivo assays with larval fathead minnows. In addition, resident sunfish, largemouth bass, and white suckers were assessed for changes in

  2. HemeBIND: a novel method for heme binding residue prediction by combining structural and sequence information

    Hu Jianjun

    2011-05-01

    Full Text Available Abstract Background Accurate prediction of binding residues involved in the interactions between proteins and small ligands is one of the major challenges in structural bioinformatics. Heme is an essential and commonly used ligand that plays critical roles in electron transfer, catalysis, signal transduction and gene expression. Although much effort has been devoted to the development of various generic algorithms for ligand binding site prediction over the last decade, no algorithm has been specifically designed to complement experimental techniques for identification of heme binding residues. Consequently, an urgent need is to develop a computational method for recognizing these important residues. Results Here we introduced an efficient algorithm HemeBIND for predicting heme binding residues by integrating structural and sequence information. We systematically investigated the characteristics of binding interfaces based on a non-redundant dataset of heme-protein complexes. It was found that several sequence and structural attributes such as evolutionary conservation, solvent accessibility, depth and protrusion clearly illustrate the differences between heme binding and non-binding residues. These features can then be separately used or combined to build the structure-based classifiers using support vector machine (SVM. The results showed that the information contained in these features is largely complementary and their combination achieved the best performance. To further improve the performance, an attempt has been made to develop a post-processing procedure to reduce the number of false positives. In addition, we built a sequence-based classifier based on SVM and sequence profile as an alternative when only sequence information can be used. Finally, we employed a voting method to combine the outputs of structure-based and sequence-based classifiers, which demonstrated remarkably better performance than the individual classifier alone

  3. Study on environmental background values of uranium in water of Dongting Lake system

    Zhai Pengji; Kang Tiesheng

    1987-01-01

    Study on environmental background values in water is the base of evaluating water quality and also is the foundational work of studying the law of distribution, accumulation and transfer of the elements. Research on background values of U in water not only can understand radioactive level but also has actual significance for the general survey of U by water. In the work uranium contents were determined by fission track analytical technique in the filtered and unfiltered specimens of river water, reservoir water and spring water taken from more than one hundred sections located in Dongting Lake system and the statistical process of data were carried out by computer. The environmental background values in water of various river system were obtained and compared with the situation of home and abroad. The seasonal variety of uranium content and the level of U in reservoir, spring water and natural reserve were discussed

  4. Delayed coking studies on Athabasca bitumen and Cold Lake heavy oil

    Govindhakannan, J.; Khulbe, C. [National Centre for Upgrading Technology, Devon, AB (Canada); Natural Resources Canada, Devon, AB (Canada). CanmetENERGY

    2009-07-01

    This poster highlighted the results of a study that quantified the delayed coking product yields of Athabasca bitumen and Cold Lake heavy oil. It also investigated the effect of operating pressure and feed rates on product yield and quality. The effect of pressure on conversion of sulphur and nitrogen was also examined. Experimental results revealed that the yield of liquid products decreases and the yields of coke and gases increase as the operating pressure increases. Sulphur and nitrogen conversions increase with increasing pressure. In this study, the yield and quality of delayed coking products were not influenced by the variation in feed rates. It was concluded that feed rate changes do not significantly affect the yield and quality of delayed coking products because the residual liquid and coke trapped in the coker drum reside there for a duration that approaches infinity, compared to much smaller average residence time for vapor-phase compounds. tabs., figs.

  5. Electrochemistry and electron paramagnetic resonance spectroscopy of cytochrome c and its heme-disrupted analogs.

    Novak, David; Mojovic, Milos; Pavicevic, Aleksandra; Zatloukalova, Martina; Hernychova, Lenka; Bartosik, Martin; Vacek, Jan

    2018-02-01

    Cytochrome c (cyt c) is one of the most studied conjugated proteins due to its electron-transfer properties and ability to regulate the processes involved in homeostasis or apoptosis. Here we report an electrochemical strategy for investigating the electroactivity of cyt c and its analogs with a disrupted heme moiety, i.e. apocytochrome c (acyt c) and porphyrin cytochrome c (pcyt c). The electrochemical data are supplemented with low-temperature and spin-probe electron paramagnetic resonance (EPR) spectroscopy. The main contribution of this report is a complex evaluation of cyt c reduction and oxidation at the level of surface-localized amino acid residues and the heme moiety in a single electrochemical scan. The electrochemical pattern of cyt c is substantially different to both analogs acyt c and pcyt c, which could be applicable in further studies on the redox properties and structural stability of cytochromes and other hemeproteins. Copyright © 2017 Elsevier B.V. All rights reserved.

  6. Use of MODIS Terra Imagery to Estimate Surface Water Quality Standards, Using Lake Thonotosassa, Florida, as a Case Study

    Moreno, Max J.; Al-Hamdan, Mohammad Z.; Estes, Maurice G., Jr.; Rickman, Douglas L.

    2010-01-01

    Lake Thonotosassa is a highly eutrophied lake located in an area with rapidly growing population in the Tampa Bay watershed, Florida. The Florida Administrative Code has designated its use for "recreation, propagation and maintenance of a healthy, well-balanced population of fish and wildlife." Although this lake has been the subject of efforts to improve water quality since 1970, overall water quality has remained below the acceptable state standards, and has a high concentration of nutrients. This condition is of great concern to public health since it has favored episodic blooms of Cyanobacteria. Some Cyanobacterial species release toxins that can reach humans through drinking water, fish consumption, and direct contact with contaminated water. The lake has been historically popular for fishing and water sports, and its overflow water drains into the Hillsborough River, the main supply of municipal water for the City of Tampa, this explains why it has being constantly monitored in situ for water quality by the Environmental Protection Commission of Hillsborough County (EPC). Advances in remote sensing technology, however, open the possibility of facilitating similar types of monitoring in this and similar lakes, further contributing to the implementation of surveillance systems that would benefit not just public health, but also tourism and ecosystems. Although traditional application of this technology to water quality has been focused on much larger coastal water bodies like bays and estuaries, this study evaluates the feasibility of its application on a 46.6 km2 freshwater lake. Using surface reflectance products from Moderate-Resolution Imaging Spectroradiometer (MODIS) Terra, this study evaluates associations between remotely sensed data and in situ data from the EPC. The parameters analyzed are the surface water quality standards used by the State of Florida and general indicators of trophic status.

  7. Study of heavy metals in Lake Abbaya, Ethiopia, and the incidence of non-parasitic elephantiasis

    Klein, A.E.

    1977-01-01

    Samples of surface water from Lake Abbaya, Ethiopia, and from nearby hot springs, have been analysed for heavy metals and other consituents. Significant levels of mercury and arsenic were observed. These findings may be relevant to the high incidence of non-parasitic elephantiasis in the immediate vicinity of the lake.

  8. Heme-binding plasma membrane proteins of K562 erythroleukemia cells: Adsorption to heme-microbeads, isolation with affinity chromatography

    Majuri, R.

    1989-01-01

    Heme-microbeads attached themselves to the surface of viable K562 cells in a manner inhibitable by free hemin, indicating heme-recptor interaction. The microbeads were at first evenly distributed, but after prolonged incubation at 37 deg. C they formed a cap on one pole of the cells indicating clustering of the membrane heme receptors. Membrane proteins were labeled by culturing the cells in the presence of 35 S-methionine and were then solubilized with Triton X-114. The hydrophobic proteins contained about 20% of the total bound label. The solubilized membrane proteins were subsequently adsorbed to a heme-Sepharose affinity gel. According to SDS-electrophorsis and subsequent autoradiography, the immobilized heme captures two proteins or a protein with two polypeptides of 20 000 and 32 000 daltons. The larger of these was only wekly labeled with 35 S. The same two bands were observed if the cell surface proteins were labeled with 125 I by the lactoperoxidase method and the subsequently solubilized membrane proteins were isolated with heme-Sepharose. (author)

  9. Subpicosecond oxygen trapping in the heme pocket of the oxygen sensor FixL observed by time-resolved resonance Raman spectroscopy.

    Kruglik, Sergei G; Jasaitis, Audrius; Hola, Klara; Yamashita, Taku; Liebl, Ursula; Martin, Jean-Louis; Vos, Marten H

    2007-05-01

    Dissociation of oxygen from the heme domain of the bacterial oxygen sensor protein FixL constitutes the first step in hypoxia-induced signaling. In the present study, the photodissociation of the heme-O2 bond was used to synchronize this event, and time-resolved resonance Raman (TR(3)) spectroscopy with subpicosecond time resolution was implemented to characterize the heme configuration of the primary photoproduct. TR(3) measurements on heme-oxycomplexes are highly challenging and have not yet been reported. Whereas in all other known six-coordinated heme protein complexes with diatomic ligands, including the oxymyoglobin reported here, heme iron out-of-plane motion (doming) occurs faster than 1 ps after iron-ligand bond breaking; surprisingly, no sizeable doming is observed in the oxycomplex of the Bradyrhizobium japonicum FixL sensor domain (FixLH). This assessment is deduced from the absence of the iron-histidine band around 217 cm(-1) as early as 0.5 ps. We suggest that efficient ultrafast oxygen rebinding to the heme occurs on the femtosecond time scale, thus hindering heme doming. Comparing WT oxy-FixLH, mutant proteins FixLH-R220H and FixLH-R220Q, the respective carbonmonoxy-complexes, and oxymyoglobin, we show that a hydrogen bond of the terminal oxygen atom with the residue in position 220 is responsible for the observed behavior; in WT FixL this residue is arginine, crucially implicated in signal transmission. We propose that the rigid O2 configuration imposed by this residue, in combination with the hydrophobic and constrained properties of the distal cavity, keep dissociated oxygen in place. These results uncover the origin of the "oxygen cage" properties of this oxygen sensor protein.

  10. Heme oxygenase is not involved in the anti-proliferative effects of statins on pancreatic cancer cells

    Vanova, K.; Boukalova, S.; Gbelcova, H.; Muchova, L.; Neuzil, J.; Gurlich, R.; Ruml, T.; Vitek, L.

    2016-01-01

    Pancreatic cancer is recognized as one of the most fatal tumors due to its aggressiveness and resistance to therapy. Statins were previously shown to inhibit the proliferation of cancer cells via various signaling pathways. In healthy tissues, statins activate the heme oxygenase pathway, nevertheless the role of heme oxygenase in pancreatic cancer is still controversial. The aim of this study was to evaluate, whether anti-proliferative effects of statins in pancreatic cancer cells are mediated via the heme oxygenase pathway. In vitro effects of various statins and hemin, a heme oxygenase inducer, on cell proliferation were evaluated in PA-TU-8902, MiaPaCa-2 and BxPC-3 human pancreatic cancer cell lines. The effect of statins on heme oxygenase activity was assessed and heme oxygenase-silenced cells were used for pancreatic cancer cell proliferation studies. Cell death rate and reactive oxygen species production were measured in PA-TU-8902 cells, followed by evaluation of the effect of cerivastatin on GFP-K-Ras trafficking and expression of markers of invasiveness, osteopontin (SPP1) and SOX2. While simvastatin and cerivastatin displayed major anti-proliferative properties in all cell lines tested, pravastatin did not affect the cell growth at all. Strong anti-proliferative effect was observed also for hemin. Co-treatment of cerivastatin and hemin increased anti-proliferative potential of these agents, via increased production of reactive oxygen species and cell death compared to individual treatment. Heme oxygenase silencing did not prevent pancreatic cancer cells from the tumor-suppressive effect of cerivastatin or hemin. Cerivastatin, but not pravastatin, protected Ras protein from trafficking to the cell membrane and significantly reduced expressions of SPP1 (p < 0.05) and SOX2 (p < 0.01). Anti-proliferative effects of statins and hemin on human pancreatic cancer cell lines do not seem to be related to the heme oxygenase pathway. While hemin triggers reactive

  11. Study on mutagenic and toxic compounds in lake water used as drinking water supply

    Monarca, S.; Zanardini, A.

    1996-01-01

    Trace amounts of mutagenic and toxic substances are frequently found in drinking water, causing a great concern for their potential health effects. Aim of this work is to develop a reliable and efficient screening method for detecting aquatic mutagens and toxins in surface water used for human consumption. For this purpose different methods of concentration of lake water have been experimented by using three different solid phase extraction systems at different pHs and studying the adsorbates by means of a mutagenicity test (Ames test), a toxicity test (LUMIStox) and chemical analysis (GC,MS). This integrated chemical/biological approach showed to be a suitable system for the preliminary choice of an efficient screening method for aquatic mutagens and toxins and to give useful data for the evaluation of potential health hazards

  12. Further study on source parameters at Quirke Mine, Elliot Lake, Ontario

    Chen, S.

    1991-01-01

    A further analysis on source parameters for thirty-seven mining-induced seismic events at Quirke Mine, Elliot Lake, Ontario, has been carried out to study the self-similarity assumption in scaling law of seismic spectrum for mining-induced microearthquakes, and to understand the focal mechanism in the mine. Evidence from high P-wave energy in a ratio E p /E s of 5% to 30%, and about 80% of the events with E s /E p L ). For the same total seismic energy, the apparent stress is limited by 80 GN.m and 800 GN.m of seismic moment. The observed stress drop is dependent on the seismic moment, which implies a breakdown in scaling law for events induced by mining. An analysis of peak particle velocity and acceleration presents the evidence for seismic attenuation over the fractured zone above the rock burst area in the mine

  13. Nuclear fuel waste management program geotechnical studies of Eye-Dashwa Lakes research area rock properties

    Chernis, P.J.; Robertson, P.B.

    1992-05-01

    The Eye-Dashwa Lakes pluton near Atikokan Ontario has been used as a study area for the Canadian nuclear fuel waste management research program. The pluton consists predominately of granite. Fractures formed during cooling of the pluton were filled with a succession of different materials at different times. Measurements of a series of geophysical and geotechnical properties of rock samples are published here in this report, including especially microcrack and pore structures. An indication has been found that a larger proportion of the porosity of Whiteshell and Atikokan samples is contained in connecting pores, compared to other rocks. This may seem surprising in view of the finding that approximately 70% of the effective porosity of Atikokan samples is contained in pockets

  14. Reconstruction of historical atmospheric Pb using Dutch urban lake sediments: A Pb isotope study

    Walraven, N., E-mail: n.walraven@geoconnect.nl [GeoConnect, Meester Dekkerstraat 4, 1901 PV Castricum (Netherlands); Os, B.J.H. van, E-mail: b.vanos@rce.nl [Rijksdienst voor Archeologie, Cultuurlandschap en Monumenten, P.O. Box 1600, 3800 BP Amersfoort (Netherlands); Klaver, G.Th., E-mail: g.klaver@brgm.nl [BRGM, 3 avenue Claude-Guillemin, BP 36009, 45060 Orléans Cedex 2 (France); Middelburg, J.J., E-mail: j.b.m.middelburg@uu.nl [University Utrecht, Faculty of Geosciences, P.O. Box 80021, 3508 TA Utrecht (Netherlands); Davies, G.R., E-mail: g.r.davies@vu.nl [VU University Amsterdam, Faculty of Earth and Life Sciences, Petrology, De Boelelaan 1085, 1081 HV Amsterdam (Netherlands)

    2014-06-01

    Lake sediments provide a record of atmospheric Pb deposition and changes in Pb isotope composition. To our knowledge, such an approach has not previously been performed in The Netherlands or linked to national air monitoring data. Results are presented for Pb content and isotope composition of {sup 137}Cs dated lake sediments from 2 Dutch urban lakes. Between 1942 and 2002 A.D. anthropogenic atmospheric Pb deposition rates in the two lakes varied from 12 ± 2 to 69 ± 16 μg cm{sup −2} year{sup −1}. The rise and fall of leaded gasoline is clearly reflected in the reconstructed atmospheric Pb deposition rates. After the ban on leaded gasoline, late 1970s/early 1980s, atmospheric Pb deposition rates decreased rapidly in the two urban lakes and the relative contributions of other anthropogenic Pb sources — incinerator ash (industrial Pb) and coal/galena — increased sharply. Atmospheric Pb deposition rates inferred from the lake record a clear relationship with nearby measured annual mean air Pb concentrations. Based on this relationship it was estimated that air Pb concentrations between 1942 and 2002 A.D. varied between 5 and 293 ng/m{sup 3}. - Highlights: • Sixty years of atmospheric Pb was reconstructed using urban lake sediments. • Stable Pb isotopes were applied to determine Pb sources in urban lakes. • The rise and fall of leaded gasoline is clearly reflected in the lake sediments. • Other dominant anthropogenic Pb sources are incinerator ash and coal/galena. • The lake Pb record shows a clear relationship with measured air Pb concentrations.

  15. Effects of illumination and packaging on non-heme iron and color attributes of sliced ham.

    Li, H; Li, C B; Xu, X L; Zhou, G H

    2012-08-01

    This study was designed to investigate effects of illumination and packaging on color of cooked cured sliced ham during refrigeration, and the possibility of decomposition of nitrosylheme under light and oxygen exposure. Three illumination levels and three packaging films with different oxygen transmission rates (OTRs) were used in two separate experiments during 35 days storage, and pH value, a* value, nitrosylheme, residual nitrite and non-heme iron were evaluated. Packaging OTRs had significant effects (P0.05) nitrosylheme concentration during storage. For both groups, storage time had a significant effect (P<0.01) on a* value and nitrosylheme. Negative relationships between nitrosylheme and nitrite in the illumination group, and between nitrosylheme and non-heme iron in the packaging group were observed. Therefore, illumination level and packaging OTR had limited effects on overall pigment stability, but more discoloration and loss of redness occurred on the surface of products. Copyright © 2012 Elsevier Ltd. All rights reserved.

  16. Expression and characterization of truncated human heme oxygenase (hHO-1) and a fusion protein of hHO-1 with human cytochrome P450 reductase.

    Wilks, A; Black, S M; Miller, W L; Ortiz de Montellano, P R

    1995-04-04

    A human heme oxygenase (hHO-1) gene without the sequence coding for the last 23 amino acids has been expressed in Escherichia coli behind the pho A promoter. The truncated enzyme is obtained in high yields as a soluble, catalytically-active protein, making it available for the first time for detailed mechanistic studies. The purified, truncated hHO-1/heme complex is spectroscopically indistinguishable from that of the rat enzyme and converts heme to biliverdin when reconstituted with rat liver cytochrome P450 reductase. A self-sufficient heme oxygenase system has been obtained by fusing the truncated hHO-1 gene to the gene for human cytochrome P450 reductase without the sequence coding for the 20 amino acid membrane binding domain. Expression of the fusion protein in pCWori+ yields a protein that only requires NADPH for catalytic turnover. The failure of exogenous cytochrome P450 reductase to stimulate turnover and the insensitivity of the catalytic rate toward changes in ionic strength establish that electrons are transferred intramolecularly between the reductase and heme oxygenase domains of the fusion protein. The Vmax for the fusion protein is 2.5 times higher than that for the reconstituted system. Therefore, either the covalent tether does not interfere with normal docking and electron transfer between the flavin and heme domains or alternative but equally efficient electron transfer pathways are available that do not require specific docking.

  17. 76 FR 1665 - Stakeholder Meetings Regarding the U.S.-Flag Great Lakes Fleet Revitalization Study; Correction

    2011-01-11

    ... DEPARTMENT OF TRANSPORTATION Maritime Administration [Docket No. MARAD-2010-0111] Stakeholder Meetings Regarding the U.S.-Flag Great Lakes Fleet Revitalization Study; Correction AGENCY: Maritime Administration, Department of Transportation. ACTION: Correction Notice. SUMMARY: On December 29, 2010, at 75 FR...

  18. Terrestrial CDOM in Lakes of Yamal Peninsula: Connection to Lake and Lake Catchment Properties

    Yury Dvornikov

    2018-01-01

    Full Text Available In this study, we analyze interactions in lake and lake catchment systems of a continuous permafrost area. We assessed colored dissolved organic matter (CDOM absorption at 440 nm (a(440CDOM and absorption slope (S300–500 in lakes using field sampling and optical remote sensing data for an area of 350 km2 in Central Yamal, Siberia. Applying a CDOM algorithm (ratio of green and red band reflectance for two high spatial resolution multispectral GeoEye-1 and Worldview-2 satellite images, we were able to extrapolate the a(λCDOM data from 18 lakes sampled in the field to 356 lakes in the study area (model R2 = 0.79. Values of a(440CDOM in 356 lakes varied from 0.48 to 8.35 m−1 with a median of 1.43 m−1. This a(λCDOM dataset was used to relate lake CDOM to 17 lake and lake catchment parameters derived from optical and radar remote sensing data and from digital elevation model analysis in order to establish the parameters controlling CDOM in lakes on the Yamal Peninsula. Regression tree model and boosted regression tree analysis showed that the activity of cryogenic processes (thermocirques in the lake shores and lake water level were the two most important controls, explaining 48.4% and 28.4% of lake CDOM, respectively (R2 = 0.61. Activation of thermocirques led to a large input of terrestrial organic matter and sediments from catchments and thawed permafrost to lakes (n = 15, mean a(440CDOM = 5.3 m−1. Large lakes on the floodplain with a connection to Mordy-Yakha River received more CDOM (n = 7, mean a(440CDOM = 3.8 m−1 compared to lakes located on higher terraces.

  19. EPR spectral changes of nitrosil hemes and their relation to the hemoglobin T-R transition

    Louro, S.R.W.; Ribeiro, P.C.; Bemski, G.

    1980-09-01

    EPR spectra of nitrosil-hemes were used to study the quaternary structure of hemoglobin. Human adult hemoglobin has been titrated with nitric oxide at pH 7.0 and 25 0 C. After the equilibration of NO among the α and β subunits the samples were frozen for EPR measurements. The spectra were fitted by linear combinations of three standard signals: the first arising from NO - β hemes and the other two arising from NO - α hemes of molecules in the high and low affinity conformations. The fractional amounts of α subunits exhibiting the high affinity spectrum fitted the two-state model with L = 7 x 10 6 , and csup(α) sub(NO) and csup(β) sub(NO) approximately 0.01. Hemoglobin has been marked with nitric oxide at one chain using low-saturation amounts of nitric oxide. The EPR spectra were studied as a function of oxygen saturation. Linear combinations of the three standard signals above fitted these spectra. The fractions of molecules exhibiting the high affinity spectrum fitted the two-state model with L = 7 x 10 6 , csub(O 2 ) = 0.0033 and csup(α) sub(NO) = 0.08, instead of csup(α) sub(NO) = 0.01.Thus, the two state model is not adequate to describe the conformational transition of these hybrids. The results are evidence of the nonequivalence between oxygen and nitric oxide as ligands. (Author) [pt

  20. The Role of Heme Chirality in the Circular Dichroism of Heme Proteins

    Woody, Robert W.; Pescitelli, Gennaro

    2014-07-01

    The rotational strength (R) of the Soret transition in sperm-whale myoglobin (SW Mb), the hemoglobin from Chironomus thummi thummi (CTT Hb), and human hemoglobin (hHb) has been calculated using 20 high-resolution ( Raro > Rpep. For CTT Hb and hHB, the orders were, respectively, Rint > Rpep > Raro and Rint > Raro ≈ Rpep. Human Hb ɑ chains showed the same trend as CTT Hb. Only in the hHb β chains did Raro predominate, with the order Raro > Rint > Rpep. The total predicted Rtot for SW Mb, CTT Hb, and hHb averaged +0.77±0.10 (0.56 - 0.80), -0.37±0.12 (-0.5), and +0.31±0.17 DBM (0.23 - 0.50), respectively. (Values in parentheses are experimental values.) Thus, contrary to the currently accepted view, coupling with aromatic side-chain or peptide transitions is not the dominant factor in the Soret circular dichroism (CD) of these proteins. The Soret CD is dominated by intrinsic CD of the heme chromophore, of which vinyl torsion is the major determinant. This result suggests an explanation for the large effect of heme isomerism on the Soret CD of Mb and Hb. Rotation about the ɑ-γ axis may be associated with large changes in vinyl torsion and thus substantially alter the intrinsic CD, even reversing its sign.

  1. Study on the relationship between the lake area variations of Qinghai-Tibetan Plateau and the corresponding climate change in their basins

    Guozhuang, Shen; Jingjuan, Liao; Huadong, Guo; Yingkui, Li

    2014-03-01

    Qinghai-Tibetan Plateau is the largest lake area in China, with a total area of existing lakes of 36,900km2, accounting for 52% of the total lake area of China. Lakes on the Tibetan Plateau play critical roles in the water cycle and ecological and environment systems of the Plateau. The global trend of warming up is increasing obviously, which has led to major changes in the climate conditions in China, even in the world. Whereas, when they analyse the relationship they just use the weather station's recording data, without any spatial analysis of the climate data. Here, we will do some researches on the relationship between the 10 selected lakes' area variation and the corresponding climate change in their drainage basin and discuss how the lakes changes in recent 40 years using the climate data processed using the spatial kriging. Thus, the drainage area can be taken into account and a real relationship can be pointed out. In order to study the relationship, Landsat MSS data, Landsat TM, Landsat ETM images, the topographic map have been collected to extract the variation of lake area. The 131 weather stations climate data, including precipitation, temperature, sun shine duration, evaporation are chosen to study the relationship. After extraction of the area of the lakes, a multivariate statistical analysis method was used to test the relationship between the area of the lakes and the global climate change, including the change of the temperature, the precipitation, and other factors. The variation of lakes in Qinghai-Tibetan Plateau is related to the mean temperature, the precipitation and saturation vapour pressure. But the frozen soil may affect the lake area variation to some extent.

  2. Study on the relationship between the lake area variations of Qinghai-Tibetan Plateau and the corresponding climate change in their basins

    Guozhuang, Shen; Jingjuan, Liao; Huadong, Guo; Yingkui, Li

    2014-01-01

    Qinghai-Tibetan Plateau is the largest lake area in China, with a total area of existing lakes of 36,900km 2 , accounting for 52% of the total lake area of China. Lakes on the Tibetan Plateau play critical roles in the water cycle and ecological and environment systems of the Plateau. The global trend of warming up is increasing obviously, which has led to major changes in the climate conditions in China, even in the world. Whereas, when they analyse the relationship they just use the weather station's recording data, without any spatial analysis of the climate data. Here, we will do some researches on the relationship between the 10 selected lakes' area variation and the corresponding climate change in their drainage basin and discuss how the lakes changes in recent 40 years using the climate data processed using the spatial kriging. Thus, the drainage area can be taken into account and a real relationship can be pointed out. In order to study the relationship, Landsat MSS data, Landsat TM, Landsat ETM images, the topographic map have been collected to extract the variation of lake area. The 131 weather stations climate data, including precipitation, temperature, sun shine duration, evaporation are chosen to study the relationship. After extraction of the area of the lakes, a multivariate statistical analysis method was used to test the relationship between the area of the lakes and the global climate change, including the change of the temperature, the precipitation, and other factors. The variation of lakes in Qinghai-Tibetan Plateau is related to the mean temperature, the precipitation and saturation vapour pressure. But the frozen soil may affect the lake area variation to some extent

  3. Tale of two pit lakes: initial results of a three-year study of the Main Zone and Waterline pit lakes near Houston, British Columbia, Canada

    Crusius, John; Pieters, R.; Leung, A.; Whittle, P.; Pedersen, T.; Lawrence, G.; McNee, J.J.

    2003-01-01

    Pit lakes are becoming increasingly common in North America as well as in the rest of the world. They are created as openpit mines fill passively with ground water and surface inflows on cessation of mining activity. In many instances, the water quality in these pit lakes does not meet regulatory requirements due to a number of influences. The most important are the oxidation of sulfide minerals and the associated release of acid and metals and the flushing of soluble metals during pit filling. Examples of pit lakes with severe water-quality problems include the Berkeley Pit lake (Butte, MT) and the Liberty Pit lake (Nevada), whose waters are characterized by a pH near 3 and Cu concentrations as high as ~150 mg/L (Miller et al., 1996; Davis and Eary, 1997). The importance of the problem can be seen in the fact that some of these sites in the United States are Superfund sites.

  4. Study of environmental isotope distribution in the Aswan High Dam Lake (Egypt) for estimation of evaporation of lake water and its recharge to adjacent groundwater

    Aly, A.I.M.; Nada, A.; Awad, M.; Hamza, M.; Salem, W.M.

    1993-01-01

    Oxygen-18 ( 18 O) and deuterium isotopes were used to estimate the evaporation from the Aswan High Dam Lake and to investigate the inter-relation between the lake water and adjacent groundwater. According to stable isotopic analysis of samples taken in 1988 and 1989, the lake can be divided into two sections. In the first section extending between Abu Simbel and a point between El-Alaki and Krosko, a remarkable vertical gradient of 18 O and deuterium isotopic composition was observed. The second northern sector extending to the High Dam is characterised by a lower vertical isotopic gradient. In this sector in general, higher values of 18 O and deuterium contents were found at the top and lower values at the bottom. Also a strong horizontal increase of the heavy isotope content was observed. Thus, in the northern section evaporation is of dominating influence on the isotopic composition of the lake water. With the help of an evaporation pan experiment it was possible to calibrate the evaporative isotope enrichment in the lake and to facilitate a preliminary estimate of evaporative losses of lake water. The evaporation from the lake was estimated to be about 19% of the input water flow rate. The groundwater around the lake was investigated and samples from production wells and piezometers were subjected to isotopic analysis. The results indicate that recent recharge to the groundwater aquifer is limited to wells near to the lake and up to a maximum distance of about 10 km. The contribution of recent Nile water to the groundwater in these wells was estimated to range between 23 and 70%. Beyond this distance, palaeowater was observed with highly depleted deuterium and 18 O contents, which was also confirmed by 14c dating. The age of palaeo groundwater in this area can reach values of more than 26,000 years. Recommendations are given for efficient water management of the lake water. (Author)

  5. Changing climate in the Lake Superior region: a case study of the June 2012 flood and its effects on the western-lake water column

    Minor, E. C.; Forsman, B.; Guildford, S. J.

    2013-12-01

    In Lake Superior, the world's largest freshwater lake by area, we are seeing annual surface-water temperature increases outpacing those of the overlying atmosphere. We are also seeing ever earlier onsets of water-column stratification (in data sets from the mid-1980s to the present). In Minnesota, including the Lake Superior watershed, precipitation patterns are also shifting toward fewer and more extreme storm events, such as the June 2012 solstice flood, which impacted the western Lake Superior basin. We are interested in how such climatological changes will affect nutrient and carbon biogeochemistry in Lake Superior. The lake is currently an oligotrophic system exhibiting light limitation of primary production in winter and spring, with summer primary production generally limited by phosphorus and sometimes co-limited by iron. Analyses in the western arm of Lake Superior showed that the June 2012 flood brought large amounts of sediment and colored dissolved organic matter (CDOM) from the watershed into the lake. There was initially a ~50-fold spike in the total phosphorus concentrations (and a 5 fold spike in soluble reactive phosphorus) in flood-impacted waters. This disappeared rapidly, in large part due to sediment settling and did not lead to an increase in chlorophyll concentrations at monitored sampling sites. Instead, lake phytoplankton appeared light limited by a surface lens of warm water enriched in CDOM that persisted for over a month after the flood event itself. Our observations highlight the need for continuing research on these complex in-lake processes in order to make accurate predictions about longer term impacts of these large episodic inputs in CDOM, sediment, and nutrient loading.

  6. Explaining the atypical reaction profiles of heme enzymes with a novel mechanistic hypothesis and kinetic treatment.

    Kelath Murali Manoj

    Full Text Available Many heme enzymes show remarkable versatility and atypical kinetics. The fungal extracellular enzyme chloroperoxidase (CPO characterizes a variety of one and two electron redox reactions in the presence of hydroperoxides. A structural counterpart, found in mammalian microsomal cytochrome P450 (CYP, uses molecular oxygen plus NADPH for the oxidative metabolism (predominantly hydroxylation of substrate in conjunction with a redox partner enzyme, cytochrome P450 reductase. In this study, we employ the two above-mentioned heme-thiolate proteins to probe the reaction kinetics and mechanism of heme enzymes. Hitherto, a substrate inhibition model based upon non-productive binding of substrate (two-site model was used to account for the inhibition of reaction at higher substrate concentrations for the CYP reaction systems. Herein, the observation of substrate inhibition is shown for both peroxide and final substrate in CPO catalyzed peroxidations. Further, analogy is drawn in the "steady state kinetics" of CPO and CYP reaction systems. New experimental observations and analyses indicate that a scheme of competing reactions (involving primary product with enzyme or other reaction components/intermediates is relevant in such complex reaction mixtures. The presence of non-selective reactive intermediate(s affords alternate reaction routes at various substrate/product concentrations, thereby leading to a lowered detectable concentration of "the product of interest" in the reaction milieu. Occam's razor favors the new hypothesis. With the new hypothesis as foundation, a new biphasic treatment to analyze the kinetics is put forth. We also introduce a key concept of "substrate concentration at maximum observed rate". The new treatment affords a more acceptable fit for observable experimental kinetic data of heme redox enzymes.

  7. Mapping Dynamics of Inundation Patterns of Two Largest River-Connected Lakes in China: A Comparative Study

    Guiping Wu; Yuanbo Liu

    2016-01-01

    Poyang Lake and Dongting Lake are the two largest freshwater lakes in China. The lakes are located approximately 300 km apart on the middle reaches of the Yangtze River and are differently connected through their respective tributary systems, which will lead to different river–lake water exchanges and discharges. Thus, differences in their morphological and hydrological conditions should induce individual lake spatio-temporal inundation patterns. Quantitative comparative analyses of the dynam...

  8. Dietary iron controls circadian hepatic glucose metabolism through heme synthesis.

    Simcox, Judith A; Mitchell, Thomas Creighton; Gao, Yan; Just, Steven F; Cooksey, Robert; Cox, James; Ajioka, Richard; Jones, Deborah; Lee, Soh-Hyun; King, Daniel; Huang, Jingyu; McClain, Donald A

    2015-04-01

    The circadian rhythm of the liver maintains glucose homeostasis, and disruption of this rhythm is associated with type 2 diabetes. Feeding is one factor that sets the circadian clock in peripheral tissues, but relatively little is known about the role of specific dietary components in that regard. We assessed the effects of dietary iron on circadian gluconeogenesis. Dietary iron affects circadian glucose metabolism through heme-mediated regulation of the interaction of nuclear receptor subfamily 1 group d member 1 (Rev-Erbα) with its cosuppressor nuclear receptor corepressor 1 (NCOR). Loss of regulated heme synthesis was achieved by aminolevulinic acid (ALA) treatment of mice or cultured cells to bypass the rate-limiting enzyme in hepatic heme synthesis, ALA synthase 1 (ALAS1). ALA treatment abolishes differences in hepatic glucose production and in the expression of gluconeogenic enzymes seen with variation of dietary iron. The differences among diets are also lost with inhibition of heme synthesis with isonicotinylhydrazine. Dietary iron modulates levels of peroxisome proliferator-activated receptor γ coactivator 1α (PGC-1α), a transcriptional activator of ALAS1, to affect hepatic heme. Treatment of mice with the antioxidant N-acetylcysteine diminishes PGC-1α variation observed among the iron diets, suggesting that iron is acting through reactive oxygen species signaling. © 2015 by the American Diabetes Association. Readers may use this article as long as the work is properly cited, the use is educational and not for profit, and the work is not altered.

  9. Peroxo-Type Intermediates in Class I Ribonucleotide Reductase and Related Binuclear Non-Heme Iron Enzymes

    Kepp, Kasper Planeta; Bell, Caleb B.; Clay, MIchael D.

    2009-01-01

    We have performed a systematic study of chemically possible peroxo-type intermediates occurring in the non-heme di-iron enzyme class la ribonucleotide reductase, using spectroscopically calibrated computational chemistry. Density functional computations of equilibrium structures, Fe-O and O-O str...

  10. A study on the levels of radioactivity in fish samples from the experimental lakes area in Ontario, Canada

    Chen, Jing; Rennie, Michael D.; Sadi, Baki; Zhang, Weihua; St-Amant, Nadereh

    2016-01-01

    To better understand background radiation levels in country foods, a total of 125 fish samples were collected from three lakes (Lake 226, Lake 302 and Lake 305) in the Experimental Lakes Area (ELA) in Ontario of Canada during the summer of 2014. Concentrations of naturally occurring radionuclides ("2"2"6Ra, "2"1"0Pb and "2"1"0Po) as well as anthropogenic radionuclides ("1"3"4Cs and "1"3"7Cs) were measured. This study confirmed that "2"1"0Po is the dominant contributor to radiation doses resulting from fish consumption. While concentrations of "2"1"0Pb and "2"2"6Ra were below conventional detection limits, "2"1"0Po was measured in almost all fish samples collected from the ELA. The average concentration was about 1.5 Bq/kg fresh weight (fw). None of the fish samples analysed in this study contained any detectable levels of "1"3"4Cs. An average "1"3"7Cs level of 6.1 Bq/kg fw was observed in freshwater fishes harvested in the ELA, almost twice that of samples measured in the National Capital Region of Canada in 2014 and more than 20 times higher than the levels observed in marine fish harvested from the Canadian west coast in 2013 and 2014. However, it is important to note that the concentrations of "1"3"7Cs in fish samples from these inland lakes are considered very low from a radiological protection perspective. The resulting radiation dose for people from fish consumption would be a very small fraction of the annual dose from exposure to natural background radiation in Canada. The results indicate that fishes from inland lakes do not pose a radiological health concern. - Highlights: • "2"1"0Po is the dominant radionuclide measured in a total of 125 fish samples. The average activity concentration was 1.5 Bq/kg fresh weight (fw). • Activity concentration of "2"1"0Po in fish showed a negative dependency on fish size. • While an average "1"3"7Cs level of 6.1 Bq/kg fw was observed, none of the fish samples analysed in this study contained any detectable

  11. Heme oxygenase-1 deletion affects stress erythropoiesis.

    Yu-An Cao

    Full Text Available Homeostatic erythropoiesis leads to the formation of mature red blood cells under non-stress conditions, and the production of new erythrocytes occurs as the need arises. In response to environmental stimuli, such as bone marrow transplantation, myelosuppression, or anemia, erythroid progenitors proliferate rapidly in a process referred to as stress erythropoiesis. We have previously demonstrated that heme oxygenase-1 (HO-1 deficiency leads to disrupted stress hematopoiesis. Here, we describe the specific effects of HO-1 deficiency on stress erythropoiesis.We used a transplant model to induce stress conditions. In irradiated recipients that received hmox(+/- or hmox(+/+ bone marrow cells, we evaluated (i the erythrocyte parameters in the peripheral blood; (ii the staining intensity of CD71-, Ter119-, and CD49d-specific surface markers during erythroblast differentiation; (iii the patterns of histological iron staining; and (iv the number of Mac-1(+-cells expressing TNF-α. In the spleens of mice that received hmox(+/- cells, we show (i decreases in the proerythroblast, basophilic, and polychromatophilic erythroblast populations; (ii increases in the insoluble iron levels and decreases in the soluble iron levels; (iii increased numbers of Mac-1(+-cells expressing TNF-α; and (iv decreased levels of CD49d expression in the basophilic and polychromatophilic erythroblast populations.As reflected by effects on secreted and cell surface proteins, HO-1 deletion likely affects stress erythropoiesis through the retention of erythroblasts in the erythroblastic islands of the spleen. Thus, HO-1 may serve as a therapeutic target for controlling erythropoiesis, and the dysregulation of HO-1 may be a predisposing condition for hematologic diseases.

  12. Repeated Fish Removal to Restore Lakes: Case Study of Lake Væng, Denmark—Two Biomanipulations during 30 Years of Monitoring

    Martin Søndergaard

    2017-01-01

    Full Text Available Biomanipulation by fish removal has been used in many shallow lakes as a method to improve lake water quality. Here, we present and analyse 30 years of chemical and biological data from the shallow and 16 ha large Lake Væng, Denmark, which has been biomanipulated twice with a 20-year interval by removing roach (Rutilus rutilus and bream (Abramis brama. After both biomanipulations, Lake Væng shifted from a turbid, phytoplankton-dominated state to a clear, water macrophyte-dominated state. Chlorophyll a was reduced from 60–80 μg·L−1 to 10–30 μg·L−1 and the coverage of submerged macrophytes, dominated by Elodea canadensis, increased from <0.1% to 70%–80%. Mean summer total phosphorus was reduced from about 0.12 to 0.07 mg·L−1 and total nitrogen decreased from 1.0 to 0.4 mg·L−1. On a seasonal scale, phosphorus and chlorophyll concentrations changed from a summer maximum during turbid conditions to a winter maximum under clear conditions. The future of Lake Væng is uncertain and a relatively high phosphorus loading via the groundwater, and the accumulation of a mobile P pool in the sediment make it likely that the lake eventually will return to turbid conditions. Repeated fish removals might be a relevant management strategy to apply in shallow lakes with a relatively high external nutrient loading.

  13. Effective electrochemical method for investigation of hemoglobin unfolding based on the redox property of heme groups at glassy carbon electrodes.

    Li, Xianchan; Zheng, Wei; Zhang, Limin; Yu, Ping; Lin, Yuqing; Su, Lei; Mao, Lanqun

    2009-10-15

    This study demonstrates a facile and effective electrochemical method for investigation of hemoglobin (Hb) unfolding based on the electrochemical redox property of heme groups in Hb at bare glassy carbon (GC) electrodes. In the native state, the heme groups are deeply buried in the hydrophobic pockets of Hb with a five-coordinate high-spin complex and thus show a poor electrochemical property at bare GC electrodes. Upon the unfolding of Hb induced by the denaturant of guanidine hydrochloride (GdnHCl), the fifth coordinative bond between the heme groups and the residue of the polypeptides (His-F8) is broken, and as a result, the heme groups initially buried deeply in the hydrophobic pockets dissociate from the polypeptide chains and are reduced electrochemically at GC electrodes, which can be used to probe the unfolding of Hb. The results on the GdnHCl-induced Hb unfolding obtained with the electrochemical method described here well coincide with those studied with other methods, such as UV-vis spectroscopy, fluorescence, and circular dichroism. The application of the as-established electrochemical method is illustrated to study the kinetics of GdnHCl-induced Hb unfolding, the GdnHCl-induced unfolding of another kind of hemoprotein, catalase, and the pH-induced Hb unfolding/refolding.

  14. Using porphyrin-amino acid pairs to model the electrochemistry of heme proteins: experimental and theoretical investigations.

    Samajdar, Rudra N; Manogaran, Dhivya; Yashonath, S; Bhattacharyya, Aninda J

    2018-04-18

    Quasi reversibility in electrochemical cycling between different oxidation states of iron is an often seen characteristic of iron containing heme proteins that bind dioxygen. Surprisingly, the system becomes fully reversible in the bare iron-porphyrin complex: hemin. This leads to the speculation that the polypeptide bulk (globin) around the iron-porphyrin active site in these heme proteins is probably responsible for the electrochemical quasi reversibility. To understand the effect of such polypeptide bulk on iron-porphyrin, we study the interaction of specific amino acids with the hemin center in solution. We choose three representative amino acids-histidine (a well-known iron coordinator in bio-inorganic systems), tryptophan (a well-known fluoroprobe for proteins), and cysteine (a redox-active organic molecule). The interactions of these amino acids with hemin are studied using electrochemistry, spectroscopy, and density functional theory. The results indicate that among these three, the interaction of histidine with the iron center is strongest. Further, histidine maintains the electrochemical reversibility of iron. On the other hand, tryptophan and cysteine interact weakly with the iron center but disturb the electrochemical reversibility by contributing their own redox active processes to the system. Put together, this study attempts to understand the molecular interactions that can control electrochemical reversibility in heme proteins. The results obtained here from the three representative amino acids can be scaled up to build a heme-amino acid interaction database that may predict the electrochemical properties of any protein with a defined polypeptide sequence.

  15. Hydroecology of Amazonian lacustrine Arcellinida (testate amoebae): A case study from Lake Quistococha, Peru.

    Patterson, R Timothy; Huckerby, Gail; Kelly, Thomas J; Swindles, Graeme T; Nasser, Nawaf A

    2015-10-01

    Organic rich sediments were obtained from seven core tops taken in Lake Quistococha, near the city of Iquitos in the Peruvian Amazon. Subsamples from 0 to 4cm depth in each core were analyzed under dissecting light microscopy to carry out the first investigation of Arcellinida (testate lobose amoebae) from a lacustrine environment in this ecologically important region. The fauna was characterized by a low diversity, low abundance community dominated by centropyxids. This fauna is similar to 'stressed' assemblages reported from temperate latitudes, except that test concentrations were two orders of magnitude lower than typical in temperate lakes. Principle arcellinidan stressors in Lake Quistococha likely include the low pH 4 conditions in the lake, and a general lack of suitable minerogenic material to construct tests in the organic rich lake substrate. The low pH conditions are the result of runoff and seepage of water high in dissolved organic carbon from the adjacent similarly low pH 4 terrestrial peatland. The dearth of minerogenic material is the result of the lake being isolated from riverine input for the past ∼2000 years, even during flooding events. Other limiting factors contributing to depressed arcellinidan populations may include nutrient supply, predation pressure, competition, and post-mortem taphonomic factors. Copyright © 2015 Elsevier GmbH. All rights reserved.

  16. A radioanalytical study of radionuclides in a dysoligotrophic lake in Southern Sweden

    Eriksson, M; Roos, P; Holm, E [Lund University Hospital, Lund, (Sweden). The Jubileum Institute, Department of Radiation Physics; Peck, G [University of Melbourne, Parkville, VIC (Australia). School of Physics, Marine Chemistry Laboratory

    1998-07-01

    Unusually high activity concentration of various artificial radionuclides (from nuclear test fallout and the Chernobyl accident) and some natural radionuclides, have been discovered in lakes with high amounts of humic substances. These lakes tend to have low pH, at times down to pH 5. The lake, Svartsjoen, in the southern part of Sweden is one of these lakes. The food chain and resulting concentration factors in Svartsjoen were investigated and compared to results for other 'normal' lakes. Fish and water samples were collected and analysed for {sup 137}Cs {sup 239+240}Pu, {sup 241}Am and {sup 210}Po during a 4-month visit to Lund. The level of {sup 239/240}Pu in the water of Svartsjoen was found to be elevated. The work on fish from the lake indicates that these elevated levels are not transferred into the food chain. It appears that the humic substances could be blocking plutonium from entering the food chain.

  17. Stable isotopes, δ18O and δ2H, in the study of water balance of Lake Massoko, Tanzania: Investigation of the exchange between lake and underground water

    Bergonzini, L.; Gibert, E.; Winckel, A.

    2002-01-01

    Full text: The stable oxygen and deuterium isotope compositions of a lake depend upon its water balance. Therefore the balance equations of stable isotopes, which imply calculation of the composition of evaporating moisture α E , provide information for assessing the water balance. In most cases, this approach is used to investigate the relationships between lakes and groundwater. Lake Massoko (8 deg. 20'S, 33 deg. 45'E, 870 m.a.s.l.) is a freshwater maar-lake without surface outlet. The lake surface and its runoff area cover 0.38 and 0.55 km 2 respectively. In contrast with the mean annual rainfall in the other parts of south Tanzania (1000-1200 mm y -1 ), the presence of Lake Malawi to the South, and the high ranges to the North (Mounts Poroto, Rungwe and Livingstone) imply local climatic features. Air masses overloaded with humidity bypassing Lake Malawi are submitted, especially in April, to ascending currents, producing rainfalls up to 2450 mm y -1 over Massoko area. Because of the evaporation rate from the lake's surface (around 2100 mm y -1 ) and without taking into account the runoff from the drainage basin, hydrological balance is positive and imply underground lost. One of most difficult points in the establishment of the isotope balances is the calculation of the composition of the evaporated water (δ E ), which requires an estimation of the isotopic composition of the water vapour in the atmosphere over the lake (δ Atm ). Without direct measurements, two ways can be used for the determination of the vapour composition (i) equilibrium with precipitation and reconstitution from them, or (ii) calculation from the balances of a terminal lake of the region. Both approaches are presented and compared, but only the second one allows physical solutions. δ Atm determined from Lake Rukwa hydrological and isotope balances has been used to calculate values for δ E over Lake Massoko. The estimation of δ Atm obtained from Lake Rukwa budgets presents a deuterium

  18. Serum heme oxygenase-1 levels in patients with primary dysmenorrhea.

    Aksoy, Ayse Nur; Laloglu, Esra; Ozkaya, Alev Lazoglu; Yilmaz, Emsal Pınar Topdagi

    2017-04-01

    Primary dysmenorrhea effects the life-quality of women negatively. The aim of this study was to evaluate heme oxygenase-1 (HO1) activity together with malondialdehyde (MDA) and nitric oxide (NO) levels in patients with primary dysmenorrhea. A total of 28 nulliparous women with the diagnosis of primary dysmenorrhea and 26 healthy controls were included in this study. On the first day of menstruation, all patients underwent ultrasound examination to exclude pelvic pathology and the visual analogue scale was applied to patients. Patient's visual analogue scale (VAS) scores, age, body mass index (BMI), menstrual cycle length (day), length of bleeding (day) were recorded. In the same day, fasting blood samples were taken from each patient for biochemical analysis. Serum MDA, NO and HO1 levels were found to be higher in women with primary dysmenorrhea compared to healthy controls (p = 0.012, p = 0.009, p dysmenorrhea. Antioxidant support might be helpful to reduce pain severity in primary dysmenorrhea.

  19. Heme oxygenase-1 mediates BAY 11-7085 induced ferroptosis.

    Chang, Ling-Chu; Chiang, Shih-Kai; Chen, Shuen-Ei; Yu, Yung-Luen; Chou, Ruey-Hwang; Chang, Wei-Chao

    2018-03-01

    Ferroptosis is a form of oxidative cell death and has become a chemotherapeutic target for cancer treatment. BAY 11-7085 (BAY), which is a well-known IκBα inhibitor, suppressed viability in cancer cells via induction of ferroptotic death in an NF-κB-independent manner. Reactive oxygen species scavenging, relief of lipid peroxidation, replenishment of glutathione and thiol-containing agents, as well as iron chelation, rescued BAY-induced cell death. BAY upregulated a variety of Nrf2 target genes related to redox regulation, particularly heme oxygenase-1 (HO-1). Studies with specific inhibitors and shRNA interventions suggested that the hierarchy of induction is Nrf2-SLC7A11-HO-1. SLC7A11 inhibition by erastin, sulfasalazine, or shRNA interference sensitizes BAY-induced cell death. Overexperession of SLC7A11 attenuated BAY-inhibited cell viability. The ferroptotic process induced by hHO-1 overexpression further indicated that HO-1 is a key mediator of BAY-induced ferroptosis that operates through cellular redox regulation and iron accumulation. BAY causes compartmentalization of HO-1 into the nucleus and mitochondrion, and followed mitochondrial dysfunctions, leading to lysosome targeting for mitophagy. In this study, we first discovered that BAY induced ferroptosis via Nrf2-SLC7A11-HO-1 pathway and HO-1 is a key mediator by responding to the cellular redox status. Copyright © 2017 Elsevier B.V. All rights reserved.

  20. Increased Plasma Levels of Heme Oxygenase-1 in Human Brucellosis.

    Chen, Zhe; Zhang, Yu-Xue; Fu, Dong-Wei; Gao, Qing-Feng; Ge, Feng-Xia; Liu, Wei-Hua

    2016-08-01

    Brucellosis is associated with inflammation and the oxidative stress response. Heme oxygenase-1 (HO-1) is a cytoprotective stress-responsive enzyme that has anti-inflammatory and anti-oxidant effects. Nevertheless, the role of HO-1 in human brucellosis has not yet been studied. The aim of this study was to examine the plasma levels of HO-1 in patients with brucellosis and to evaluate the ability of plasma HO-1 levels as an auxiliary diagnosis, a severity predictor, and a monitor for brucellosis treatments. A total of 75 patients with brucellosis were divided into the acute, subacute, chronic active, and chronic stable groups. An additional 20 volunteers were included as the healthy control group. The plasma HO-1 levels and other laboratory parameters were measured in all groups. Furthermore, the plasma levels of HO-1 in the acute group were compared before and after treatment. The plasma HO-1 levels were considerably increased in the acute (4.97 ± 3.55), subacute (4.98 ± 3.23), and chronic active groups (4.43 ± 3.00) with brucellosis compared to the healthy control group (1.03 ± 0.63) (p brucellosis (r = 0.707, p brucellosis status and may be used as a supplementary plasma marker for diagnosing brucellosis and monitoring its treatment.

  1. Mini Heme-Proteins: Designability of Structure and Diversity of Functions.

    Rai, Jagdish

    2017-08-30

    Natural heme proteins may have heme bound to poly-peptide chain as a cofactor via noncovalent forces or heme as a prosthetic group may be covalently bound to the proteins. Nature has used porphyrins in diverse functions like electron transfer, oxidation, reduction, ligand binding, photosynthesis, signaling, etc. by modulating its properties through diverse protein matrices. Synthetic chemists have tried to utilize these molecules in equally diverse industrial and medical applications due to their versatile electro-chemical and optical properties. The heme iron has catalytic activity which can be modulated and enhanced for specific applications by protein matrix around it. Heme proteins can be designed into novel enzymes for sterio specific catalysis ranging from oxidation to reduction. These designed heme-proteins can have applications in industrial catalysis and biosensing. A peptide folds around heme easily due to hydrophobic effect of the large aromatic ring of heme. The directional property of co-ordinate bonding between peptide and metal ion in heme further specifies the structure. Therefore heme proteins can be easily designed for targeted structure and catalytic activity. The central aromatic chemical entity in heme viz. porphyrin is a very ancient molecule. Its presence in the prebiotic soup and in all forms of life suggests that it has played a vital role in the origin and progressive evolution of living organisms. Porphyrin macrocycles are highly conjugated systems composed of four modified pyrrole subunits interconnected at their α -carbon atoms via methine (=CH-) bridges. Initial minimalist models of hemoproteins focused on effect of heme-ligand co-ordinate bonding on chemical reactivity, spectroscopy, electrochemistry and magnetic properties of heme. The great sensitivity of these spectroscopic features of heme to its surrounding makes them extremely useful in structural elucidation of designed heme-peptide complexes. Therefore heme proteins are

  2. Novel Insights in Mammalian Catalase Heme Maturation: Effect of NO and Thioredoxin-1

    Chakravarti, Ritu; Gupta, Karishma; Majors, Alana; Ruple, Lisa; Aronica, Mark; Stuehr, Dennis J.

    2015-01-01

    Catalase is a tetrameric heme-containing enzyme with essential antioxidant functions in biology. Multiple factors including nitric oxide (NO) have been shown to attenuate its activity. However, the possible impact of NO in relation to the maturation of active catalase, including its heme acquisition and tetramer formation, has not been investigated. We found that NO attenuates heme insertion into catalase in both short-term and long-term incubations. The NO inhibition in catalase heme incorpo...

  3. Heme in pathophysiology: a matter of scavenging, metabolism and trafficking across cell membranes

    Chiabrando, Deborah; Vinchi, Francesca; Fiorito, Veronica; Mercurio, Sonia; Tolosano, Emanuela

    2014-01-01

    Heme (iron-protoporphyrin IX) is an essential co-factor involved in multiple biological processes: oxygen transport and storage, electron transfer, drug and steroid metabolism, signal transduction, and micro RNA processing. However, excess free-heme is highly toxic due to its ability to promote oxidative stress and lipid peroxidation, thus leading to membrane injury and, ultimately, apoptosis. Thus, heme metabolism needs to be finely regulated. Intracellular heme amount is controlled at multi...

  4. Staphylococcus aureus HemX Modulates Glutamyl-tRNA Reductase Abundance To Regulate Heme Biosynthesis

    Jacob E. Choby; Caroline M. Grunenwald; Arianna I. Celis; Svetlana Y. Gerdes; Jennifer L. DuBois; Eric P. Skaar; Kimberly A. Kline

    2018-01-01

    Staphylococcus aureus is responsible for a significant amount of devastating disease. Its ability to colonize the host and cause infection is supported by a variety of proteins that are dependent on the cofactor heme. Heme is a porphyrin used broadly across kingdoms and is synthesized de novo from common cellular precursors and iron. While heme is critical to bacterial physiology, it is also toxic in high concentrations, requiring that organisms encode regulatory processes to control heme hom...

  5. Ground penetrating radar study of a thickness of biogenic sediments in the vicinity of the Czechowskie Lake

    Lamparski, Piotr

    2014-05-01

    The paper present results of investigations, which have made on a biogenic plain in the north-east part of the vicinity of the Czechowskie Lake. The basin of Lake Czechowskie occupies a deep depression located in the immediate hinterland of the maximum range of the Pomeranian Phase ice sheet in the northern part of Poland (Błaszkiewicz 2005). Drillings carried out within the peat plain in the western part of the lake basin indicate that there are relatively diversified lake sediments of up to 12 m in thickness. The ground penetrating radar profiling method (GPR) was used to determine a thickness of biogenic sediments. To tests was used GSS'I SIR SYSTEM-2000™ radar device with two antennae - the high resolution 400 MHz central frequency - for shallow prospecting of the subsurface layers and the low resolution 35 MHz - for determining the shape of the mineral bedrock. Overall, 33 GPR profiles was made all in all more than 3000 meters along and crosswise the longer axis of the biogenic plain. The range of radar penetration was set to 200 ns for 400 MHz antenna and 600 ns for the 35 MHz one, what is the equivalent respectively 4 m and 12,5 m in depth of biogenic sediments thickness. Horizontal scaling was made by GSSI survey wheel device. The thickness of biogenic sediments recognized by GPR reaches 10 meters only using 35 MHz antenna. In the case of the 400 MHz antenna, relatively high conductivity water-saturated peat and gyttia did not allow for the achievement of greater thickness than 3-4 meters testing. In a large part of the profiles was able to see the shape of the mineral bedrock in the form of a former lake basin. Also observed elevations and thresholds in the bedrock. Depth of the mineral deposits forming former lake bottom was confirmed by drillings. This study is a contribution to the Virtual Institute of Integrated Climate and Landscape Evolution Analysis -ICLEA- of the Helmholtz Association. References: Błaszkiewicz M, 2005. Późnoglacjalna i

  6. Human heme oxygenase oxidation of 5- and 15-phenylhemes.

    Wang, Jinling; Niemevz, Fernando; Lad, Latesh; Huang, Liusheng; Alvarez, Diego E; Buldain, Graciela; Poulos, Thomas L; de Montellano, Paul R Ortiz

    2004-10-08

    Human heme oxygenase-1 (hHO-1) catalyzes the O2-dependent oxidation of heme to biliverdin, CO, and free iron. Previous work indicated that electrophilic addition of the terminal oxygen of the ferric hydroperoxo complex to the alpha-meso-carbon gives 5-hydroxyheme. Earlier efforts to block this reaction with a 5-methyl substituent failed, as the reaction still gave biliverdin IXalpha. Surprisingly, a 15-methyl substituent caused exclusive cleavage at the gamma-meso-rather than at the normal, unsubstituted alpha-meso-carbon. No CO was formed in these reactions, but the fragment cleaved from the porphyrin eluded identification. We report here that hHO-1 cleaves 5-phenylheme to biliverdin IXalpha and oxidizes 15-phenylheme at the alpha-meso position to give 10-phenylbiliverdin IXalpha. The fragment extruded in the oxidation of 5-phenylheme is benzoic acid, one oxygen of which comes from O2 and the other from water. The 2.29- and 2.11-A crystal structures of the hHO-1 complexes with 1- and 15-phenylheme, respectively, show clear electron density for both the 5- and 15-phenyl rings in both molecules of the asymmetric unit. The overall structure of 15-phenylheme-hHO-1 is similar to that of heme-hHO-1 except for small changes in distal residues 141-150 and in the proximal Lys18 and Lys22. In the 5-phenylheme-hHO-1 structure, the phenyl-substituted heme occupies the same position as heme in the heme-HO-1 complex but the 5-phenyl substituent disrupts the rigid hydrophobic wall of residues Met34, Phe214, and residues 26-42 near the alpha-meso carbon. The results provide independent support for an electrophilic oxidation mechanism and support a role for stereochemical control of the reaction regiospecificity.

  7. DFT studies of the substituent effects of dimethylamino on non-heme active oxidizing species: iron(V)-oxo species or iron(IV)-oxo acetate aminopyridine cation radical species?

    Wang, Fang; Sun, Wei; Xia, Chungu; Wang, Yong

    2017-10-01

    Through the introduction of dimethylamino (Me 2 N) substituent at the pyridine ring of 2-((R)-2-[(R)-1-(pyridine-2-ylmethyl)pyrrolidin-2-yl]pyrrolidin-1-ylmethyl)pyridine (PDP) ligand, the non-heme Fe II ( Me2N PDP)/H 2 O 2 /AcOH catalyst system was found to exhibit significant higher catalytic activity and enantioselectivity than the non-substituent one in the asymmetric epoxidation experiments. The mechanistic origin of the remarkable substituent effects in these oxidation reactions has not been well established. To ascertain the potent oxidant and the related reaction mechanism, a detailed DFT calculation was performed. Interestingly, a novel Fe(IV)-oxo Me2N PDP cation radical species, [( Me2N PDP) + · Fe IV (O)(OAc)] 2+ ( Me2N 5), with about one spin spreading over the non-heme Me2N PDP ligand was formed via a carboxylic-acid-assisted O-O bond heterolysis, which is reminiscent of Compound I (an Fe(IV)(O)(porphyrin cation radical) species) in cytochrome P450 chemistry. Me2N 5 is energetically comparable with the cyclic ferric peracetate species Me2N 6, while in the pristine Fe(PDP) catalyst system, H 6 is more stable than H 5. Comparison of the activation energy for the ethylene epoxidation promoted by Me2N 5 and Me2N 6, Me2N 5 is supposed as the true oxidant triggering the epoxidation of olefins. In addition, a systematic research on the substituent effects varied from the electron-donating substituent (dMM, the substituents at sites 3, 4, and 5 of the pyridine ring: methyl, methoxyl, and methyl) to the electron-withdrawing one (CF 3 , 2,6-bis(trifluoromethyl)phenyl) on the electronic structure of the reaction intermediates has also been investigated. An alternative cyclic ferric peracetate complex is obtained, indicating that the substituents at the pyridine ring of PDP ligands have significant impacts on the electronic structure of the oxidants.

  8. Dust Generation Resulting from Desiccation of Playa Systems: Studies on Mono and Owens Lakes, California

    Gill, Thomas Edward

    1995-01-01

    Playas, evaporites, and aeolian sediments frequently are linked components within the Earth system. Anthropogenic water diversions from terminal lakes form playas that release fugitive dust. These actions, documented worldwide, simulate aeolian processes activated during palaeoclimatic pluvial/interpluvial transitions, and have significant environmental impacts. Pluvial lakes Russell and Owens in North America's Great Basin preceded historic Mono and Owens Lakes, now desiccated by water diversions into dust-generating, evaporite -encrusted playas. Geochemical and hydrologic cycles acting on the Owens (Dry) Lake playa form three distinct crust types each year. Although initial dust production results from deflation of surface efflorescences after the playa dries, most aerosols are created by saltation abrasion of salt/silt/clay crusts at crust/ sand sheet contacts. The warm-season, clastic "cemented" crust is slowest to degrade into dust. If the playa surface is stabilized by an unbroken, non-efflorescent crust, dust formation is discouraged. When Mono Lake's surFace elevation does not exceed 1951 meters (6400 feet), similar processes will also generate dust from its saline lower playa. Six factors--related to wind, topography, groundwater, and sediments--control dust formation at both playas. These factors were combined into a statistical model relating suspended dust concentrations to playa/lake morphometry. The model shows the extent and severity of Mono Lake dust storms expands significantly below the surface level 6376 feet (1943.5 meters). X-ray diffraction analysis of Mono Basin soils, playa sediments, and aerosols demonstrates geochemical cycling of materials through land, air and water during Mono Lake's 1982 low stand. Soils and clastic playa sediments contain silicate minerals and tephra. Saline groundwater deposited calcite, halite, thenardite, gaylussite, burkeite and glauberite onto the lower playa. Aerosols contained silicate minerals (especially

  9. Study of pike-perch (Sander lucioperca fishery from Razim Lake, Danube delta Romania

    CERNIȘENCU Irina

    2018-05-01

    Full Text Available The Razim Lake is a great part of the Danube Delta Biosphere Reserve (DDBR, with a surface of 54,000 ha. Fish fauna from Razim lake include pike-perch (Sander lucioperca as one of the main top predators of fish community, however ecological significance indicates accessory species, recedent as dominance, sometimes been subrecedent species like in 2011 and 2012 sampling, but constant species regarding frequency in sampling. Otherwise, pike-perch is an important value DDBR fishery species with an average of 5% in total catch, range 2-10%, from what Razim lake contributes with average 71%, range 41-95% in the 1960-2015 period. Razim Lake has been in average 13%, range 1-40% from total Razim lake catch, in the same period of time. Since in RBDD has been fishing up to 2000 fisherman, in Razim lake activated up to 500 fishermen, however nowadays number of fishermen was regulated at lower range. Catch data series shows a continuous stock decline trend, considered to be a consequences of habitat degradation and over-exploitation. Fish stock estimation in last 15 years (2001-2016 support the hypothesis of over-exploitation. Based on length frequency structure of landings, the growth and exploitation parameters have been estimated as well as the average biomass and the maximum sustainable yields for the Razim lake pike-perch stock. Recommendation concerning fisheries management towards sustainable fishing of pike-perch stock, as increasing of cod-end seine mesh size and decreasing of fishing effort regulation are outlined.

  10. Establishment patterns of water-elm at Catahoula Lake, Louisiana

    Karen S. Doerr; Sanjeev Joshi; Richard F. Keim

    2015-01-01

    At Catahoula Lake in central Louisiana, an internationally important lake for water fowl, hydrologic alterations to the surrounding rivers and the lake itself have led to an expansion of water-elm (Planera aquatic J.F. Gmel.) into the lake bed. In this study, we used dendrochronology and aerial photography to quantify the expansion of water-elm in the lake and identify...

  11. Increasingly, Data Availability Limits Model Predictive Capacity: the Western Lake Erie Basin, a Case Study

    Behrman, K. D.; Johnson, M. V. V.; Atwood, J. D.; Norfleet, M. L.

    2016-12-01

    Recent algal blooms in Western Lake Erie Basin (WLEB) have renewed scientific community's interest in developing process based models to better understand and predict the drivers of eutrophic conditions in the lake. At the same time, in order to prevent future blooms, farmers, local communities and policy makers are interested in developing spatially explicit nutrient and sediment management plans at various scales, from field to watershed. These interests have fueled several modeling exercises intended to locate "hotspots" in the basin where targeted adoption of additional agricultural conservation practices could provide the most benefit to water quality. The models have also been used to simulate various scenarios representing potential agricultural solutions. The Soil and Water Assessment Tool (SWAT) and its sister model, the Agricultural Policy Environmental eXtender (APEX), have been used to simulate hydrology of interacting land uses in thousands of scientific studies around the world. High performance computing allows SWAT and APEX users to continue to improve and refine the model specificity to make predictions at small-spatial scales. Consequently, data inputs and calibration/validation data are now becoming the limiting factor to model performance. Water quality data for the tributaries and rivers that flow through WLEB is spatially and temporally limited. Land management data, including conservation practice and nutrient management data, are not publicly available at fine spatial and temporal scales. Here we show the data uncertainties associated with modeling WLEB croplands at a relatively large spatial scale (HUC-4) using site management data from over 1,000 farms collected by the Conservation Effects Assessment Project (CEAP). The error associated with downscaling this data to the HUC-8 and HUC-12 scale is shown. Simulations of spatially explicit dynamics can be very informative, but care must be taken when policy decisions are made based on models

  12. Mining and drought in the tropical Andes: a case study of lake Poopó

    Zogheib, C.

    2017-12-01

    The respective impacts of mining water withdrawals and El Niño-related droughts on water availability in the Altiplano region of the tropical Andes were investigated. The naturally semi-arid to arid climate of the region is highly vulnerable to the effects of the El Niño Southern Oscillation (ENSO) as well as changes to the Bolivian High upper troposphere circulation. The 2015-2016 El Niño event displayed a maximal Oceanic Niño Index (ONI) of up to 2.2 °C, comparable with the 1998-1999 event, considered as the most severe of the 20th century with a maximal ONI of 2.5 °C. This has severely impacted the Altiplano region. Whereas mining has been found to affect observed water quality in the region, its influence on water availability has not been extensively examined. In light of these observations, the case of Lake Poopó, a water body at the intersection of both these climatic and anthropogenic influences, was further analyzed. The lake was officially declared dry in January 2016 by the Bolivian government. Therefore, a water balance model was implemented for the Lake Titicaca - Río Desaguadero - Lake Poopó - Salar de Coipasa (TDPS) catchment, simulating several possible climatic scenarios. Mines were identified and associated water withdrawals were extrapolated using available processing water consumption data. Long-term climatic trends, as averaged between 1970 and 2010 were used to assess the recovery prospects of the lake. Mining was found to have a very limited impact on water quantity in Lake Poopó, with total mining water withdrawals accounting for 0.2% to 0.4% of the total amount of water flowing into the lake from the Desaguadero River, reduced by only 1%. However, 1998 El Niño-induced drought conditions were found to cause a net yearly reduction in storage of 0.76 m. Under such climatic constraints, it was obtained that 32 months were needed for the lake to dry out from its height of 1.972 m as observed on the 10th of April 2013 and 38 months

  13. Modeling thermal structure, ice cover regime and sensitivity to climate change of two regulated lakes - a Norwegian case study

    Gebre, Solomon; Boissy, Thibault; Alfredsen, Knut

    2013-04-01

    A great number of river and lakes in Norway and the Nordic region at large are regulated for water management such as hydropower production. Such regulations have the potential to alter the thermal and hydrological regimes in the lakes and rivers downstream impacting on river environment and ecology. Anticipated changes as a result of climate change in meteorological forcing data such as air temperature and precipitation cause changes in the water balance, water temperature and ice cover duration in the reservoirs. This may necessitate changes in operational rules as part of an adaptation strategy for the future. In this study, a one dimensional (1D) lake thermodynamic and ice cover model (MyLake) has been modified to take into account the effect of dynamic outflows in reservoirs and applied to two small but relatively deep regulated lakes (reservoirs) in Norway (Follsjøen and Tesse). The objective was to assess climate change impacts on the seasonal thermal characteristics, the withdrawal temperatures, and the reservoir ice cover dynamics with current operational regimes. The model solves the vertical energy balance on a daily time-step driven by meteorological and hydrological forcings: 2m air temperature, precipitation, 2m relative humidity, 10m wind speed, cloud cover, air pressure, solar insolation, inflow volume, inflow temperature and reservoir outflows. Model calibration with multi-seasonal data of temperature profiles showed that the model performed well in simulating the vertical water temperature profiles for the two study reservoirs. The withdrawal temperatures were also simulated reasonably well. The comparison between observed and simulated lake ice phenology (which were available only for one of the reservoirs - Tesse) was also reasonable taking into account the uncertainty in the observational data. After model testing and calibration, the model was then used to simulate expected changes in the future (2080s) due to climate change by considering

  14. Studies of dry deposition of trace elements and diesel soot onto Lake Michigan and the Chesapeake Bay

    Ondov, J.M.; Caffrey, P.F.; Suarez, A.E.; Han, M.; Borgoul, P.V.

    1995-01-01

    As part of the Atmospheric Exchange Over Lakes and Oceans Study (AEOLOS) study, the University of Maryland participated in four intensive field campaigns, three on Lake Michigan (LM) and one on the Chesapeake Bay (CB), to determine the size distributions of potentially toxic elemental aerosol constituents, determine their sources, and their dry deposition loadings to surface waters. The work further seeks to elucidate the relative importance of constituents of fine- and coarse particles, as differentiation of these modes is essential to the eventual formation of control strategies. Unique components of the UMCP studies include (1) resolution of toxic elemental components of aerosol particles depositing to LM and CB by particle size and by source and (2) a Lake-wide evaluation of the importance of fine and coarse particle deposition to inorganic contamination of LM surface waters. In addition, a unique component of the Baltimore Study was the application of a sensitive iridium tracer to intentionally tag emissions form the City of Baltimore's sanitation truck fleet to tag the Baltimore urban plume and to determine the atmospheric behavior of diesel soot particles, a major source of urban carbon aerosol and the principle carrier of toxic polynuclear aromatic hydrocarbons. The work encompasses results for >40 elements by X-ray fluorescence and instrumental neutron activation analyses of more than 700 individual size-segregated aerosol, deposition, urban dust, and surface-water-suspended particulate samples. An overview of the results of these studies will be presented

  15. Statistical analysis of lake levels and field study of groundwater and surface-water exchanges in the northeast Twin Cities Metropolitan Area, Minnesota, 2002 through 2015: Chapter A of Water levels and groundwater and surface-water exchanges in lakes of the northeast Twin Cities Metropolitan Area, Minnesota, 2002 through 2015

    Jones, Perry M.; Trost, Jared J.; Diekoff, Aliesha L.; Rosenberry, Donald O.; White, Eric A.; Erickson, Melinda L.; Morel, Daniel L.; Heck, Jessica M.

    2016-10-19

    Water levels declined from 2003 to 2011 in many lakes in Ramsey and Washington Counties in the northeast Twin Cities Metropolitan Area, Minnesota; however, water levels in other northeast Twin Cities Metropolitan Area lakes increased during the same period. Groundwater and surface-water exchanges can be important in determining lake levels where these exchanges are an important component of the water budget of a lake. An understanding of groundwater and surface-water exchanges in the northeast Twin Cities Metropolitan Area has been limited by the lack of hydrologic data. The U.S. Geological Survey, in cooperation with the Metropolitan Council and Minnesota Department of Health, completed a field and statistical study assessing lake-water levels and regional and local groundwater and surface-water exchanges near northeast Twin Cities Metropolitan Area lakes. This report documents the analysis of collected hydrologic, water-quality, and geophysical data; and existing hydrologic and geologic data to (1) assess the effect of physical setting and climate on lake-level fluctuations of selected lakes, (2) estimate potential percentages of surface-water contributions to well water across the northeast Twin Cities Metropolitan Area, (3) estimate general ages for waters extracted from the wells, and (4) assess groundwater inflow to lakes and lake-water outflow to aquifers downgradient from White Bear Lake. Statistical analyses of lake levels during short-term (2002–10) and long-term (1925–2014) periods were completed to help understand lake-level changes across the northeast Twin Cities Metropolitan Area. Comparison of 2002–10 lake levels to several landscape and geologic characteristics explained variability in lake-level changes for 96 northeast Twin Cities Metropolitan Area lakes. Application of several statistical methods determined that (1) closed-basin lakes (without an active outlet) had larger lake-level declines than flow-through lakes with an outlet; (2

  16. From lake to estuary, the tale of two waters: a study of aquatic continuum biogeochemistry.

    Julian, Paul; Osborne, Todd Z

    2018-01-25

    The balance of fresh and saline water is essential to estuarine ecosystem function. Along the fresh-brackish-saline water gradient within the C-43 canal/Caloosahatchee River Estuary (CRE), the quantity, timing and distribution of water, and associated water quality significantly influence ecosystem function. Long-term trends of water quality and quantity were assessed from Lake Okeechobee to the CRE between May 1978 and April 2016. Significant changes to monthly flow volumes were detected between the lake and the estuary which correspond to changes in upstream management. and climatic events. Across the 37-year period, total phosphorus (TP) flow-weighted mean (FWM) concentration significantly increased at the lake; meanwhile, total nitrogen (TN) FMW concentrations significantly declined at both the lake and estuary headwaters. Between May 1999 and April 2016, TN, TP, and total organic carbon (TOC), ortho-P, and ammonium conditions were assessed within the estuary at several monitoring locations. Generally, nutrient concentrations decreased from upstream to downstream with shifts in TN/TP from values > 20 in the freshwater portion, ~ 20 in the estuarine portion, and estuary is net heterotrophic with productivity being negatively influenced by TP, TN, and TOC likely due to a combination of effects including shading by high color dissolved organic matter. We conclude that rainfall patterns, land use, and the resulting discharges of runoff drive the ecology of the C-43/CRE aquatic continuum and associated biogeochemistry rather than water management associated with Lake Okeechobee.

  17. A preliminary study of the Hg flux from selected Ohio watersheds to Lake Erie

    Fitzgibbon, T.O.; Berry Lyons, W.; Gardner, Christopher B.; Carey, Anne E.

    2008-01-01

    New measurements of riverine dissolved and particulate Hg fluxes into Lake Erie from 12 northern Ohio watersheds have been determined from samples collected in April 2002 and analyzed using ultra-clean techniques with cold-vapor atomic fluorescence spectrometry. Total Hg concentrations ranged through 2.5-18.5 ng L -1 , with a mean of 10.4 ng L -1 with most Hg in particulate form. Dissolved Hg concentrations ranged through 0.8-4.3 ng L -1 , with a mean of 2.5 ng L -1 . Highest total Hg concentrations were observed in western rivers with primarily agricultural land use and eastern rivers with mixed land use in their watersheds. Total suspended solid concentrations ranged through 10-180 mg L -1 with particulate Hg concentrations ranging through 47-170 ng g -1 , with a mean of 99 ng g -1 . Particulate Hg was similar to published data for central Lake Erie bottom sediments but much lower than for bottom sediments in western Lake Erie. Total Hg concentrations were positively correlated with suspended sediment concentrations and negatively with dissolved NO 3 - concentrations. The total estimated annual Hg fluxes from these rivers into Lake Erie is estimated to be 85 kg, but because only one event was sampled during high flow conditions, this may be an overestimate. This is much lower than previous published estimates of riverine Hg input into Lake Erie

  18. Study of the behaviour of transuranics and possible chemical homologues in Lake Michigan water and biota

    Wahlgren, M.A.; Alberts, J.J.; Nelson, D.M.; Orlandini, K.A.

    1976-01-01

    Concentration factors for Pu, Am and U in Lake Michigan biota are compared to those of a number of stable trace elements that have short residence times in Lake Michigan water. The relative order of uptake for these nuclides in Lake Michigan biota is Am>Pu much>U. Evidence is summarized which suggests that the predominant oxidation state of 239 , 240 Pu in Lake Michigan water is 4+. Concentrations of 239 , 240 Pu in net plankton, filterable particulate matter, sediment trap, and benthic floc samples indicate that sorption by biogenic detritus, and settling of this material, can account for the reduced concentration of 239 , 240 Pu observed in surface waters during summer stratification, but that deposition into the sediments is primarily non-biological. Concentrations of 7 Be, 144 Ce and 137 Cs in sediment trap samples show the effect of spring convective mixing and demonstrate the resuspension of mineral-rich surficial sediments during the summer months. The effect on the concentration of dissolved plutonium in the water column, of varying degrees of resuspension of sedimentary floc, is described using a simple mass-action model. A radiochemical method for the determination of americium and uranium in Lake Michigan environmental samples is also presented. (author)

  19. Benzylic oxidation of gemfibrozil-1-O-beta-glucuronide by P450 2C8 leads to heme alkylation and irreversible inhibition.

    Baer, Brian R; DeLisle, Robert Kirk; Allen, Andrew

    2009-07-01

    Gemfibrozil-1-O-beta-glucuronide (GEM-1-O-gluc), a major metabolite of the antihyperlipidemic drug gemfibrozil, is a mechanism-based inhibitor of P450 2C8 in vitro, and this irreversible inactivation may lead to clinical drug-drug interactions between gemfibrozil and other P450 2C8 substrates. In light of this in vitro finding and the observation that the glucuronide conjugate does not contain any obvious structural alerts, the current study was conducted to determine the potential site of GEM-1-O-gluc bioactivation and the subsequent mechanism of P450 2C8 inhibition (i.e., modification of apoprotein or heme). LC/MS analysis of a reaction mixture containing recombinant P450 2C8 and GEM-1-O-gluc revealed that the substrate was covalently linked to the heme prosthetic heme group during catalysis. A combination of mass spectrometry and deuterium isotope effects revealed that a benzylic carbon on the 2',5'-dimethylphenoxy group of GEM-1-O-gluc was covalently bound to the heme of P450 2C8. The regiospecificity of substrate addition to the heme group was not confirmed experimentally, but computational modeling experiments indicated that the gamma-meso position was the most likely site of modification. The metabolite profile, which consisted of two benzyl alcohol metabolites and a 4'-hydroxy-GEM-1-O-gluc metabolite, indicated that oxidation of GEM-1-O-gluc was limited to the 2',5'-dimethylphenoxy group. These results are consistent with an inactivation mechanism wherein GEM-1-O-gluc is oxidized to a benzyl radical intermediate, which evades oxygen rebound, and adds to the gamma-meso position of heme. Mechanism-based inhibition of P450 2C8 can be rationalized by the formation of the GEM-1-O-gluc-heme adduct and the consequential restriction of additional substrate access to the catalytic iron center.

  20. Strategic decision making under climate change: a case study on Lake Maggiore water system

    M. Micotti

    2014-09-01

    Full Text Available Water resources planning processes involve different kinds of decisions that are generally evaluated under a stationary climate scenario assumption. In general, the possible combinations of interventions are mutually compared as single alternatives. However, the ongoing climate change requires us to reconsider this approach. Indeed, what have to be compared are not individual alternatives, but families of alternatives, characterized by the same structural decisions, i.e. by actions that have long-term effects and entail irrevocable changes in the system. The rationale is that the structural actions, once they have been implemented, cannot be easily modified, while the management decisions can be adapted to the evolving conditions. This paper considers this methodological problem in a real case study, in which a strategic decision has to be taken: a new barrage was proposed to regulate Lake Maggiore outflow, but, alternatively, either the present barrage can be maintained with its present regulation norms or with a new one. The problem was dealt with by multi-criteria decision analysis involving many stakeholders and two decision-makers. An exhaustive set of indicators was defined in the participatory process, conducted under the integrated water resource management paradigm, and many efficient (in Pareto sense regulation policies were identified. The paper explores different formulations of a global index to evaluate and compare the effectiveness of the classes of alternatives under both stationary and changing hydrological scenarios in order to assess their adaptability to the ongoing climate change.

  1. Strategic decision making under climate change: a case study on Lake Maggiore water system

    Micotti, M.; Soncini Sessa, R.; Weber, E.

    2014-09-01

    Water resources planning processes involve different kinds of decisions that are generally evaluated under a stationary climate scenario assumption. In general, the possible combinations of interventions are mutually compared as single alternatives. However, the ongoing climate change requires us to reconsider this approach. Indeed, what have to be compared are not individual alternatives, but families of alternatives, characterized by the same structural decisions, i.e. by actions that have long-term effects and entail irrevocable changes in the system. The rationale is that the structural actions, once they have been implemented, cannot be easily modified, while the management decisions can be adapted to the evolving conditions. This paper considers this methodological problem in a real case study, in which a strategic decision has to be taken: a new barrage was proposed to regulate Lake Maggiore outflow, but, alternatively, either the present barrage can be maintained with its present regulation norms or with a new one. The problem was dealt with by multi-criteria decision analysis involving many stakeholders and two decision-makers. An exhaustive set of indicators was defined in the participatory process, conducted under the integrated water resource management paradigm, and many efficient (in Pareto sense) regulation policies were identified. The paper explores different formulations of a global index to evaluate and compare the effectiveness of the classes of alternatives under both stationary and changing hydrological scenarios in order to assess their adaptability to the ongoing climate change.

  2. Reconnaissance study of uranium and fluorine contents of stream and lake waters, West Greenland

    Steenfelt, A.; Dam, E.

    1982-01-01

    The present study forms part of a current investigation on the applicability of geochemical methods in mineral exploration in Greenland. The sampling programme of 1981 comprised three parts: (1) A helicopter supported, low density, regional sampling (1 sample/30 km 2 ) of stream water and stream sediment in the area covered by map sheet 66 V.2, south-east of Soendre Stroemfjord. A total of 207 water samples was obtained. (2) Detailed sampling within a 20 km 2 area of lake and stream water (71 samples) from a camp at 66deg49'N, 25deg37'W, 25 km south-west of Soendre Stroemfjord. (3) Reconnaissance sampling, by boat, along the southern part of the west coast of Greenland. The aim of this reconnaissance was to obtain information on the character of the drainage systems and on the availability of sample media (water, stream sediment, aquatic moss) for geochemical exploration. A total of 195 water samples were collected. In addition, rust zones and areas of known mineralisation along the coast were sampled. (author)

  3. Using a Computational Study of Hydrodynamics in the Wax Lake Delta to Examine Data Sharing Principles

    Qian Zhang

    2017-01-01

    Full Text Available In this paper we describe a complex dataset used to study the circulation and wind-driven flows in the Wax Lake Delta, Louisiana, USA under winter storm conditions. The whole package bundles a large dataset (approximately 74 GB, which includes the numerical model, software and scripts for data analysis and visualization, as well as detailed documentation. The raw data came from multiple external sources, including government agencies, community repositories, and deployed field instruments and surveys. Each raw dataset goes through the processes of data QA/QC, data analysis, visualization, and interpretation. After integrating multiple datasets, new data products are obtained which are then used with the numerical model. The numerical model undergoes model verification, testing, calibration, and optimization. With a complex algorithm of computation, the model generates a structured output dataset, which is, after post-data analysis, presented as informative scientific figures and tables that allow interpretations and conclusions contributing to the science of coastal physical oceanography. Performing this study required a tremendous amount of effort. While the work resulted in traditional dissemination via a thesis, journal articles and conference proceedings, more can be gained. The data can be reused to study reproducibility or as preliminary investigation to explore a new topic. With thorough documentation and well-organized data, both the input and output dataset should be ready for sharing in a domain or institutional repository. Furthermore, the data organization and documentation also serves as a guideline for future research data management and the development of workflow protocols. Here we will describe the dataset created by this study, how sharing the dataset publicly could enable validation of the current study and extension by new studies, and the challenges that arise prior to sharing the dataset.

  4. The preglacial sediment record of Lake Ladoga, NW Russia - first results from a multi-proxy study on a 23 m sediment record

    Gromig, R.; Melles, M.; Wagner, B.; Krastel, S.; Andreev, A.; Fedorov, G.; Just, J.; Wennrich, V.; Savelieva, L.; Subetto, D.; Shumilovskikh, L.

    2016-12-01

    The joint German-Russian project 'PLOT - Paleolimnological Transect' aims to recover lake sediment sequences along a more than 6000 km long longitudinal transect across the Eurasian Arctic in order to study the Late Quaternary climatic and environmental history. The eastern end of the PLOT transect is formed by the well-studied record from Lake El'gygytgyn (NE Siberia). Lake Ladoga (N 60°50' E 31°30') is Europe's largest lake, both by size and volume and forms the westernmost end of the transect. Whereas modern sedimentation as well as the Holocene and Late Glacial history of Lake Ladoga have intensely been studied, the preglacial history of the lake is poorly studied to date by sediment cores drilled in the 1930's. A seismic survey of Lake Ladoga in summer 2013 revealed unconformities in the western lake basin, which may separate preglacial sediments in isolated depressions from Late Glacial and Holocene sediment successions above. A 23 m long sediment core (Co1309) was retrieved from one of these depressions. Core Co1309 was investigated by XRF-scanning, magnetic susceptibility measurements, as well as pollen, grain-size, and bio-geochemical analyses. An age-depth model combining radiocarbon, OSL, and paleomagnetic dates is in progress. Both, the pollen results and the OSL ages from the base of the record indicate a deposition during MIS 5e (Eemian). The well sorted reddish sands from this interval contain dinoflagellates suggesting at least brackish conditions, likely due to the existence of a gateway connecting a precursor of the Baltic Sea with the White Sea via Lake Ladoga. The Late Glacial sequence consists of greyish varved clays of decreasing thickness upwards with sporadically intercalated sand layers. The Holocene sequence is composed of brownish diatomaceous silty clay with minor proportions of sand.

  5. Quantifying Streamflow Variations in Ungauged Lake Basins by Integrating Remote Sensing and Water Balance Modelling: A Case Study of the Erdos Larus relictus National Nature Reserve, China

    Kang Liang

    2017-06-01

    Full Text Available Hydrological predictions in ungauged lakes are one of the most important issues in hydrological sciences. The habitat of the Relict Gull (Larus relictus in the Erdos Larus relictus National Nature Reserve (ELRNNR has been seriously endangered by lake shrinkage, yet the hydrological processes in the catchment are poorly understood due to the lack of in-situ observations. Therefore, it is necessary to assess the variation in lake streamflow and its drivers. In this study, we employed the remote sensing technique and empirical equation to quantify the time series of lake water budgets, and integrated a water balance model and climate elasticity method to further examine ELRNNR basin streamflow variations from1974 to 2013. The results show that lake variations went through three phases with significant differences: The rapidly expanding sub-period (1974–1979, the relatively stable sub-period (1980–1999, and the dramatically shrinking sub-period (2000–2013. Both climate variation (expressed by precipitation and evapotranspiration and human activities were quantified as drivers of streamflow variation, and the driving forces in the three phases had different contributions. As human activities gradually intensified, the contributions of human disturbances on streamflow variation obviously increased, accounting for 22.3% during 1980–1999 and up to 59.2% during 2000–2013. Intensified human interferences and climate warming have jointly led to the lake shrinkage since 1999. This study provides a useful reference to quantify lake streamflow and its drivers in ungauged basins.

  6. A Case Study on the Selection of Purification Project of Lake

    Shen Shilong

    2015-01-01

    Full Text Available This paper will mainly talk about best scheme for the water purification project of the Lake. The engineering used the water diversion metabolism method to purify the water. If the lake area and the water volume are small, the metabolic cycle is relatively short; if the lake area and the water volume are large, the metabolic cycle is relatively long. Simultaneously, the larger the water flow is, the shorter the metabolic cycle period is and the higher the average metabolic rate is. The process of the water metabolism is in agreement with the direction of the water flow movement. With the gradual metabolism of water, different water bodies begin to dilute and diffuse. The engineers will choose the most appropriate water division project according to different water division volumes and water division routes.

  7. Oxidative stress modulates heme synthesis and induces peroxiredoxin-2 as a novel cytoprotective response in β-thalassemic erythropoiesis.

    De Franceschi, Lucia; Bertoldi, Mariarita; De Falco, Luigia; Santos Franco, Sara; Ronzoni, Luisa; Turrini, Franco; Colancecco, Alessandra; Camaschella, Clara; Cappellini, Maria Domenica; Iolascon, Achille

    2011-11-01

    β-thalassemic syndromes are inherited red cell disorders characterized by severe ineffective erythropoiesis and increased levels of reactive oxygen species whose contribution to β-thalassemic anemia is only partially understood. We studied erythroid precursors from normal and β-thalassemic peripheral CD34(+) cells in two-phase liquid culture by proteomic, reverse transcriptase polymerase chain reaction and immunoblot analyses. We measured intracellular reactive oxygen species, heme levels and the activity of δ-aminolevulinate-synthase-2. We exposed normal cells and K562 cells with silenced peroxiredoxin-2 to H(2)O(2) and generated a recombinant peroxiredoxin-2 for kinetic measurements in the presence of H(2)O(2) or hemin. In β-thalassemia the increased production of reactive oxygen species was associated with down-regulation of heme oxygenase-1 and biliverdin reductase and up-regulation of peroxiredoxin-2. In agreement with these observations in β-thalassemic cells we found decreased heme levels related to significantly reduced activity of the first enzyme of the heme pathway, δ-aminolevulinate synthase-2 without differences in its expression. We demonstrated that the activity of recombinant δ-aminolevulinate synthase-2 is inhibited by both reactive oxygen species and hemin as a protective mechanism in β-thalassemic cells. We then addressed the question of the protective role of peroxiredoxin-2 in erythropoiesis by exposing normal cells to oxidative stress and silencing peroxiredoxin-2 in human erythroleukemia K562 cells. We found that peroxiredoxin-2 expression is up-regulated in response to oxidative stress and required for K562 cells to survive oxidative stress. We then showed that peroxiredoxin-2 binds heme in erythroid precursors with high affinity, suggesting a possible multifunctional cytoprotective role of peroxiredoxin-2 in β-thalassemia. In β-thalassemic erythroid cells the reduction of δ-aminolevulinate synthase-2 activity and the increased

  8. Mitochondrial Cytochrome c Oxidase Biogenesis Is Regulated by the Redox State of a Heme-Binding Translational Activator.

    Soto, Iliana C; Barrientos, Antoni

    2016-02-20

    Mitochondrial cytochrome c oxidase (COX), the last enzyme of the respiratory chain, catalyzes the reduction of oxygen to water and therefore is essential for cell function and viability. COX is a multimeric complex, whose biogenesis is extensively regulated. One type of control targets cytochrome c oxidase subunit 1 (Cox1), a key COX enzymatic core subunit translated on mitochondrial ribosomes. In Saccharomyces cerevisiae, Cox1 synthesis and COX assembly are coordinated through a negative feedback regulatory loop. This coordination is mediated by Mss51, a heme-sensing COX1 mRNA-specific processing factor and translational activator that is also a Cox1 chaperone. In this study, we investigated whether Mss51 hemylation and Mss51-mediated Cox1 synthesis are both modulated by the reduction-oxidation (redox) environment. We report that Cox1 synthesis is attenuated under oxidative stress conditions and have identified one of the underlying mechanisms. We show that in vitro and in vivo exposure to hydrogen peroxide induces the formation of a disulfide bond in Mss51 involving CPX motif heme-coordinating cysteines. Mss51 oxidation results in a heme ligand switch, thereby lowering heme-binding affinity and promoting its release. We demonstrate that in addition to affecting Mss51-dependent heme sensing, oxidative stress compromises Mss51 roles in COX1 mRNA processing and translation. H2O2-induced downregulation of mitochondrial translation has so far not been reported. We show that high H2O2 concentrations induce a global attenuation effect, but milder concentrations specifically affect COX1 mRNA processing and translation in an Mss51-dependent manner. The redox environment modulates Mss51 functions, which are essential for regulation of COX biogenesis and aerobic energy production.

  9. Role of neutron activation analysis in the study of heavy metal pollution of a lake-river system

    Filby, R.H.; Shah, K.R.; Funk, W.H.

    1974-01-01

    Details of a study of combined organic and metallic pollution of the Coeur d'Alene Lake-River and Spokane River system and the role played by nuclear techniques in the investigation are presented. The Coeur d'Alene River drains through the N. Idaho Pb--Zn mining region of Kellogg and the mining industry is the major source of metallic pollution of the lake and river system. The first part of the study has involved the determination of Pb, Zn, Ag, Cd, As, Cu, Sb, Co, Cr, Cs, Rb, Sc, Ba, Eu, La, Tb, Y, Zr, Fe, Mn, Mo, by INAA in waters, sediments and organisms throughout the region. Extremely high values for Pb, Zn, Sb, Fe and other metals were found in the Coeur d'Alene River delta sediments and in the lake sediments. Results from the study of metals in an aquatic ecosystem show the value of combining nuclear techniques with other methods of trace analysis in practical pollution problems

  10. Cysteine-independent activation/inhibition of heme oxygenase-2

    Dragic Vukomanovic

    2016-01-01

    Full Text Available Reactive thiols of cysteine (cys residues in proteins play a key role in transforming chemical reactivity into a biological response. The heme oxygenase-2 (HO-2 isozyme contains two cys residues that have been implicated in binding of heme and also the regulation of its activity. In this paper, we address the question of a role for cys residues for the HO-2 inhibitors or activators designed in our laboratory. We tested the activity of full length recombinant human heme oxygenase-2 (FL-hHO-2 and its analog in which cys265 and cys282 were both replaced by alanine to determine the effect on activation by menadione (MD and inhibition by QC-2350. Similar inhibition by QC-2350 and almost identical activation by MD was observed for both recombinant FL-hHO-2s. Our findings are interpreted to mean that thiols of FL-hHO-2s are not involved in HO-2 activation or inhibition by the compounds that have been designed and identified by us. Activation or inhibition of HO-2 by our compounds should be attributed to a mechanism other than altering binding affinity of HO-2 for heme through cys265 and cys282.

  11. Cysteine-independent activation/inhibition of heme oxygenase-2.

    Vukomanovic, Dragic; Rahman, Mona N; Maines, Mahin D; Ozolinš, Terence Rs; Szarek, Walter A; Jia, Zongchao; Nakatsu, Kanji

    2016-03-01

    Reactive thiols of cysteine (cys) residues in proteins play a key role in transforming chemical reactivity into a biological response. The heme oxygenase-2 (HO-2) isozyme contains two cys residues that have been implicated in binding of heme and also the regulation of its activity. In this paper, we address the question of a role for cys residues for the HO-2 inhibitors or activators designed in our laboratory. We tested the activity of full length recombinant human heme oxygenase-2 (FL-hHO-2) and its analog in which cys265 and cys282 were both replaced by alanine to determine the effect on activation by menadione (MD) and inhibition by QC-2350. Similar inhibition by QC-2350 and almost identical activation by MD was observed for both recombinant FL-hHO-2s. Our findings are interpreted to mean that thiols of FL-hHO-2s are not involved in HO-2 activation or inhibition by the compounds that have been designed and identified by us. Activation or inhibition of HO-2 by our compounds should be attributed to a mechanism other than altering binding affinity of HO-2 for heme through cys265 and cys282.

  12. AN ELISA ASSAY FOR HEME OXYGENASE (HO-1)

    An ELISA assay for heme oxygenase (HO-l ) Abstract A double antibody capture ELISA for the HO-l protein has been developed to separately quantitate HO-I protein. The use of 2.5% NP40 detergent greatly assists in freeing HO-l protein from membranes and/or other cel...

  13. Morphometric Studies on Anodonta Anatine Bivalve Population from the Dognecea Lake

    Marian Bura

    2011-10-01

    Full Text Available In the Dognecea Lake, near town Bocsa in Caras-Severin county a strong bivalve population has been discovered from the duck mussel specie (Anodonta anatina. Harvested individuals were transported to the Aquaculture laboratory where measurements and correct identification was made. This specie is considered endangered but in Banat area, especially in the Dognecea Lake it is well represented, having an ecological importance, but the bivalve can have an economical importance too, due to the high percentage of edible part of 56.5%.

  14. A study of the river basins and limnology of five humic lakes on Chiloé Island Estudio de la cuenca y limnología en cinco lagos húmicos de la Isla Chiloé

    L. VILLALOBOS

    2003-12-01

    Full Text Available From November 1996 to October 1997, the river basins of five humic lakes on Chiloé Island were studied monthly: Lakes Natri, Tepuhueico, Tarahuín, Huillinco and Cucao. The objective of this study was to know the catchment area, river basin and the main physical, chemical and biological characteristics of these humic lakes. The trophic status, the actual loading, and the mass balances of phosphorus and nitrogen were determined in relation to anthropogenic activities. Lakes Cucao and Huillinco were characterized by a marine influence. All the lakes had brown coloured waters, caused by humic substances, which limit their transparency. Lake Natri was the deepest (58 m, whereas Lake Tepuhueico had the shallowest depth (25 m. Total phosphorus and nitrogen fluctuated between 23.5 and 35 µg L-1 and 197 and 380 mug L-1 (annual average in lakes Natri, Tepuhueico and Tarahuín, respectively. Lakes Cucao and Huillinco showed extremely high concentrations of total nitrogen (annual average or = 3,000 mug L-1 and total phosphorus (= 223 and 497 mug L-1, and were classified as hyper-eutrophic. Lake Tarahuín registered the greatest diversity of phytoplankton, with 55 species, including Ceratium hirundinella which also occurred in lakes Cucao and Tarahuín. The diversity of the zooplankton community varied across these lakes. The presence of Diaptomus diabolicus (Tumeodiaptomus d. Dussart 1979 (Cucao, Huillinco and Tepuhueico is noteworthy since this extends its geographical distribution to the south

  15. Studies of up date radionuclides, macro- and microelements distribution in system 'soil from water-collecting areas - water - bottom sediment' of the Skazka's lake

    Vosel, Yu.S.; Strakhovenko, V.D.

    2008-01-01

    Distribution of radionuclides, macro- and microelements have been studied in bottom sediments of lake Skazka. The lake occur in south Baikal coast. The average contents of the radiocesium excess over background 3 times more. From the 137 Cs and 210 Pb distribution throughout the column, we have estimated the dynamics of changes in the sediments. The known depth and time of formation of these bench marks permitted estimation of the rate of recent sedimentation in the lake: 0,3 and 0,2 sm/year.

  16. Evolution of soil and vegetation cover on the bottom of drained thermokarst lake (a case study in the European Northeast of Russia)

    Kaverin, Dmitry; Pastukhov, Alexander

    2015-04-01

    The evolution of soils and landscapes has been studied in a lake bed of former thermokarst lake, which was totally drained in 1979. Melioration of thermokarst lakes was conducted experimentally and locally under Soviet economics program during 1970-s. The aim of the program was to increase in biomass productivity of virgin tundra permafrost-thermokarst sites under agricultural activities. The former thermokarst lake "Opytnoe" located in the Bolshezemelskaya Tundra, Russian European Northeast. The lake bed is covered by peat-mineral sediments, which serves as soil-forming sediments favoring subsequent permafrost aggradation and cryogenic processes as well. Initially, after drainage, swampy meadows had been developed almost all over the lake bed. Further on, succession of landscape went diversely, typical and uncommon tundra landscapes formed. When activated, cryogenic processes favored the formation of peat mounds under dwarf shrub - lichen vegetation (7% of the area). Frost cracks and peat circles affected flat mounds all over the former lake bottom. On drained peat sites, with no active cryogenic processes, specific grass meadows on Cryic Sapric Histosols were developed. Totally, permafrost-affected soils occupy 77% of the area (2011). In some part of the lake bed further development of waterlogging leads to the formation of marshy meadows and willow communities where Gleysols prevail. During last twenty years, permafrost degradation has occurred under tall shrub communities, and it will progress in future. Water erosion processes in the drained lake bottom promoted the formation of local hydrographic network. In the stream floodplain grassy willow-stands formed on Fluvisols (3% of the area). The study has been conducted under Clima-East & RFBR 14-05-31111 projects.

  17. Improved Method for the Incorporation of Heme Cofactors into Recombinant Proteins Using Escherichia coli Nissle 1917.

    Fiege, Kerstin; Querebillo, Christine Joy; Hildebrandt, Peter; Frankenberg-Dinkel, Nicole

    2018-05-15

    Recombinant production of heme proteins in Escherichia coli is often limited by the availability of heme in the host. Therefore, several methods, including the reconstitution of heme proteins after production but prior to purification or the HPEX system, conferring the ability to take up external heme have been developed and used in the past. Here we describe the use of the apathogenic E. coli strain Nissle 1917 (EcN) as a suitable host for the recombinant production of heme proteins. EcN has an advantage over commonly used lab strains in that it is able to take up heme from the environment through the heme receptor ChuA. Expression of several heme proteins from different prokaryotic sources led to high yield and quantitative incorporation of the cofactor when heme was supplied in the growth medium. Comparative UV-vis and resonance Raman measurements revealed that the method employed has significant influence on heme coordination with the EcN system representing the most native situation. Therefore, the use of EcN as a host for recombinant heme protein production represents an inexpensive and straightforward method to facilitate further investigations of structure and function.

  18. Fish as bioindicators in aquatic environmental pollution assessment: A case study in Lake Victoria wetlands, Uganda

    Naigaga, I.; Kaiser, H.; Muller, W. J.; Ojok, L.; Mbabazi, D.; Magezi, G.; Muhumuza, E.

    Growing human population and industrialization have led to the pollution of most aquatic ecosystems and consequent deterioration in environmental water quality. Indicator organisms are needed to improve assessment programmes on the ecological impacts of anthropogenic activities on the aquatic environment. Fish have been widely documented as useful indicators of environmental water quality because of their differential sensitivity to pollution. This study investigated the environmental water quality of selected wetland ecosystems using fish as biological indicators. Fish community structure in relation to water quality was assessed in five wetlands along the shoreline of Lake Victoria from August 2006 to June 2008. Four urban wetlands were variedly impacted by anthropogenic activities while one rural wetland was less impacted, and served as a reference site. Fish species diversity, abundance and richness were assessed, and canonical correspondence analysis (CCA) was used to evaluate the relationship between the fish communities and environmental variables. Results revealed that urban effluent impacted negatively on water quality and consequently the fish community structure. A total of 29 fish species were recorded throughout the study with the lowest number of 15 species recorded in the most impacted site. Shannon diversity and Margalef species richness indices were highest at the references site and lowest at the most impacted site. Wetland haplochromis species dominated the reference site, while oreochromis species dominated the most impacted site. The inshore locations registered higher species diversity and low species richness than the offshore locations. Low dissolved oxygen, pH, secchi depth and high electrical conductivity, total phosphorous, and total nitrogen were strongly associated with the effluent-impacted sites and greatly influenced the fish community structure. This study recommends the use of fish as valuable biological indicators in aquatic

  19. Cytochrome c and c1 heme lyases are essential in Plasmodium berghei.

    Posayapisit, Navaporn; Songsungthong, Warangkhana; Koonyosying, Pongpisid; Falade, Mofolusho O; Uthaipibull, Chairat; Yuthavong, Yongyuth; Shaw, Philip J; Kamchonwongpaisan, Sumalee

    Malaria parasites possess a de novo heme synthetic pathway. Interestingly, this pathway is dispensable during the blood stages of development in mammalian hosts. The assembly of the two most important hemeproteins, cytochromes c and c1, is mediated by cytochrome heme lyase enzymes. Plasmodium spp. possess two cytochrome heme lyases encoded by separate genes. Given the redundancy of heme synthesis, we sought to determine if heme lyase function also exhibits redundancy. To answer this question, we performed gene knockout experiments. We found that the PBANKA_143950 and PBANKA_0602600 Plasmodium berghei genes encoding cytochrome c (Pbcchl) and cytochrome c1 (Pbcc 1 hl) heme lyases, respectively, can only be disrupted when a complementary gene is present. In contrast, four genes in the de novo heme synthesis pathway can be disrupted without complementation. This work provides evidence that Pbcchl and Pbcc 1 hl are both essential and thus may be antimalarial targets. Copyright © 2016 Elsevier B.V. All rights reserved.

  20. Genome-based analysis of heme biosynthesis and uptake in prokaryotic systems.

    Cavallaro, Gabriele; Decaria, Leonardo; Rosato, Antonio

    2008-11-01

    Heme is the prosthetic group of many proteins that carry out a variety of key biological functions. In addition, for many pathogenic organisms, heme (acquired from the host) may constitute a very important source of iron. Organisms can meet their heme demands by taking it up from external sources, by producing the cofactor through a dedicated biosynthetic pathway, or both. Here we analyzed the distribution of proteins specifically involved in the processes of heme biosynthesis and heme uptake in 474 prokaryotic organisms. These data allowed us to identify which organisms are capable of performing none, one, or both processes, based on the similarity to known systems. Some specific instances where one or more proteins along the pathways had unusual modifications were singled out. For two key protein domains involved in heme uptake, we could build a series of structural models, which suggested possible alternative modes of heme binding. Future directions for experimental work are given.

  1. Shoreline change assessment using multi-temporal satellite images: a case study of Lake Sapanca, NW Turkey.

    Duru, Umit

    2017-08-01

    The research summarized here determines historical shoreline changes along Lake Sapanca by using Remote Sensing (RS) and Geographical Information Systems (GIS). Six multi-temporal satellite images of Landsat Multispectral Scanner (L1-5 MMS), Enhanced Thematic Mapper Plus (L7 ETM+), and Operational Land Imager Sensors (L8 OLI), covering the period between 17 June 1975 and 15 July 2016, were used to monitor shoreline positions and estimate change rates along the coastal zone. After pre-possessing routines, the Normalized Difference Water Index (NDWI), Modified Normalized Difference Water Index (MNDWI), and supervised classification techniques were utilized to extract six different shorelines. Digital Shoreline Analysis System (DSAS), a toolbox that enables transect-based computations of shoreline displacement, was used to compute historical shoreline change rates. The average rate of shoreline change for the entire cost was 2.7 m/year of progradation with an uncertainty of 0.2 m/year. While the great part of the lake shoreline remained stable, the study concluded that the easterly and westerly coasts and deltaic coasts are more vulnerable to shoreline displacements over the last four decades. The study also reveals that anthropogenic activities, more specifically over extraction of freshwater from the lake, cyclic variation in rainfall, and deposition of sediment transported by the surrounding creeks dominantly control spatiotemporal shoreline changes in the region. Monitoring shoreline changes using multi-temporal satellite images is a significant component for the coastal decision-making and management.

  2. CYTOCHROME P450 REGULATION: THE INTERPLAY BETWEEN ITS HEME AND APOPROTEIN MOIETIES IN SYNTHESIS, ASSEMBLY, REPAIR AND DISPOSAL123

    Correia, Maria Almira; Sinclair, Peter R.; De Matteis, Francesco

    2010-01-01

    Heme is vital to our aerobic universe. Heme cellular content is finely tuned through an exquisite control of synthesis and degradation. Heme deficiency is deleterious to cells, whereas excess heme is toxic. Most of the cellular heme serves as the prosthetic moiety of functionally diverse hemoproteins, including cytochromes P450 (P450s). In the liver, P450s are its major consumers with >50% of hepatic heme committed to their synthesis. Prosthetic heme is the sine qua non of P450 catalytic biot...

  3. Proton magnetic resonance study of the influence of chemical modification, mutation, quaternary state, and ligation state on dynamic stability of the heme pocket in hemoglobin as reflected in the exchange of the proximal histidyl ring labile proton

    Han, K.H.; La Mar, G.N.; Nagai, K.

    1989-01-01

    Proton nuclear magnetic resonance spectroscopy has been utilized to investigate the rates of exchange with deuterium of the proximal histidyl ring protons in a series of chemically modified and mutated forms of Hb A. Differences in rates of exchange are related to differences in the stability of the deformed or partially unfolded intermediates from which exchange with bulk solvent takes place. Each modified/mutated Hb exhibited kinetic subunit heterogeneity in the reduced ferrous state, with the alpha subunit exhibiting faster exchange than the beta subunit. Modification or mutation resulted in significant increases in the His F8 ring NH exchange rates primarily for the affected subunit and only if the modification/mutation occurs at the allosterically important alpha 1 beta 2 subunit interface. Moreover, this enhancement in exchange rate is observed primarily in that quaternary state of the modified/mutated Hb in which the modified/substituted residue makes the intersubunit contact. This confirms the importance of allosteric constraints in determining the dynamic properties of the heme pocket. Using modified or mutated Hbs that can switch between the alternate quaternary states within a given ligation state or ligate within a given quaternary state, we show that the major portion of the enhanced exchange rate in R-state oxy Hb relative to T-state deoxy Hb originates from the quaternary switch rather than from ligation. However, solely ligation effects are not negligible. The exchange rates of the His F8 ring labile protons increase dramatically upon oxidizing the iron to the ferric state, and both the subunit kinetic heterogeneity and the allosteric sensitivity to the quaternary state are essentially abolished

  4. Hydrochemistry dynamics in remote mountain lakes and its relation to catchment and atmospheric features: the case study of Sabocos Tarn, Pyrenees.

    Santolaria, Zoe; Arruebo, Tomas; Urieta, José Santiago; Lanaja, Francisco Javier; Pardo, Alfonso; Matesanz, José; Rodriguez-Casals, Carlos

    2015-01-01

    Increasing the understanding of high mountain lake dynamics is essential to use these remote aquatic ecosystems as proxies of global environmental changes. With this aim, at Sabocos, a Pyrenean cirque glacial lake or tarn, this study shows the main results of a morphological and catchment characterization, along with statistical analyses of its hydrochemical trends and their concomitant driving factors from 2010 to 2013. Dissolved oxygen, water temperature stratification, and its snow and ice cover composition and dynamics have been also investigated. According to morphological analyses, Sabocos can be classified as a medium-large and deep lake, having a circular contour and a long water retention time as compared to Pyrenean glacial lake average values. Sabocos hydrochemistry is mainly determined by very high alkalinity, pH and conductivity levels, and high Ca(2+), Mg(2+), and SO4(2-) content, coming from the easily weatherable limestone-dolomite bedrock. Thus, lake water is well buffered, and therefore, Sabocos tarn is non-sensitive to acidification processes. On the other hand, the main source of K(+), Na(+), and Cl(-) (sea salts) and nutrients (NH4(+), NO3(-), and phosphorous) to lake water appears to be atmospheric deposition. Primary production is phosphorous limited, and due to the N-saturation stage of the poorly developed soils of Sabocos catchment, NO3(-) is the chief component in the total nitrogen pool. External temperature seems to be the major driver regulating lake productivity, since warm temperatures boot primary production. Although precipitation might also play an important role in lake dynamics, especially regarding to those parameters influenced by the weathering of the bedrock, its influence cannot be easily assessed due to the seasonal isolation produced by the ice cover. Also, as occurs in the whole Pyrenean lake district, chemical composition of bulk deposition is highly variable due to the contribution of air masses with different origin.

  5. Bacterial Nitric Oxide Synthase Is Required for the Staphylococcus aureus Response to Heme Stress.

    Surdel, Matthew C; Dutter, Brendan F; Sulikowski, Gary A; Skaar, Eric P

    2016-08-12

    Staphylococcus aureus is a pathogen that causes significant morbidity and mortality worldwide. Within the vertebrate host, S. aureus requires heme as a nutrient iron source and as a cofactor for multiple cellular processes. Although required for pathogenesis, excess heme is toxic. S. aureus employs a two-component system, the heme sensor system (HssRS), to sense and protect against heme toxicity. Upon activation, HssRS induces the expression of the heme-regulated transporter (HrtAB), an efflux pump that alleviates heme toxicity. The ability to sense and respond to heme is critical for the pathogenesis of numerous Gram-positive organisms, yet the mechanism of heme sensing remains unknown. Compound '3981 was identified in a high-throughput screen as an activator of staphylococcal HssRS that triggers HssRS independently of heme accumulation. '3981 is toxic to S. aureus; however, derivatives of '3981 were synthesized that lack toxicity while retaining HssRS activation, enabling the interrogation of the heme stress response without confounding toxic effects of the parent molecule. Using '3981 derivatives as probes of the heme stress response, numerous genes required for '3981-induced activation of HssRS were uncovered. Specifically, multiple genes involved in the production of nitric oxide were identified, including the gene encoding bacterial nitric oxide synthase (bNOS). bNOS protects S. aureus from oxidative stress imposed by heme. Taken together, this work identifies bNOS as crucial for the S. aureus heme stress response, providing evidence that nitric oxide synthesis and heme sensing are intertwined.

  6. Dietary heme mediated PPARα activation does not affect the heme-induced epithelial hyperproliferation and hyperplasia in mouse colon

    IJssennagger, Noortje; Wit, de Nicole; Muller, Michael; Meer, van der Roelof

    2012-01-01

    Red meat consumption is associated with an increased colon cancer risk. Heme, present in red meat, injures the colon surface epithelium by luminal cytotoxicity and reactive oxygen species. This surface injury is overcompensated by hyperproliferation and hyperplasia of crypt cells. Transcriptome

  7. Dietary heme-mediated PPARa activation does not affect the heme-induced epithelial hyperproliferation and hyperplasia in mouse colon

    IJssenagger, N.; Wit, de N.J.W.; Muller, M.R.; Meer, van der R.

    2012-01-01

    Red meat consumption is associated with an increased colon cancer risk. Heme, present in red meat, injures the colon surface epithelium by luminal cytotoxicity and reactive oxygen species. This surface injury is overcompensated by hyperproliferation and hyperplasia of crypt cells. Transcriptome

  8. 75 FR 82141 - Stakeholder Meetings Regarding the U.S.-Flag Great Lakes Fleet Revitalization Study

    2010-12-29

    ... future role of Great Lakes shipping in supporting the region's economy and as an important component of... port assets will be developed. That inventory will be used to determine if the Maritime Administration... environmental regulations. This analysis will be used in developing strategies for how the Maritime...

  9. Geochronologic study of sediments deposition of two lakes from the Rio Negro basin, Amazonas State, Brazil

    Gomes, Ana Carla F.; Mozeto, Antonio A.; Cazotti, Raul I.; Nascimento Filho, Virgilio F.; Taddei, Maria Helena

    2000-01-01

    Since 1963 the radionuclide 210 Pb became an important tool for dating (geochronology) recent sediments (up to 120 years). In this work the sedimentary geochronology of two lakes from the Negro River Basin was determined, using different radiochemical separation methods for 210 Pb and 226 Ra. (author)

  10. Wisconsin's Lake Superior Basin Water Quality Study. Supplement. Technical Report No. 2.

    Whisnant, David M., Ed.

    During the period extending from May 1972 through April 1973, an investigation of the overall water quality conditions of streams flowing into Lake Superior from the entire state of Wisconsin was conducted. The goal of this publication was to provide much needed regional information on water quality, drainage basins, pollution sources and loads,…

  11. An economic inquisition of water quality trading programs, with a case study of Jordan Lake, NC.

    Motallebi, Marzieh; Hoag, Dana L; Tasdighi, Ali; Arabi, Mazdak; Osmond, Deanna L

    2017-05-15

    A water quality trading (WQT) program was promulgated in North Carolina to address water quality issues related to nutrients in the highly urbanizing Jordan Lake Watershed. Although WQT programs are appealing in theory, the concept has not proved feasible in several attempts between point and nonpoint polluters in the United States. Many application hurdles that create wedges between success and failure have been evaluated in the literature. Most programs, however, face multiple hurdles; eliminating one may not clear a pathway to success. Therefore, we identify and evaluate the combined impact of four different wedges including baseline, transaction cost, trading ratio, and trading cost in the Jordan Lake Watershed program. Unfortunately, when applied to the Jordan Lake program, the analysis clearly shows that a traditional WQT program will not be feasible or address nutrient management needs in a meaningful way. The hurdles individually would be difficult to overcome, but together they appear to be unsurmountable. This analysis shows that there is enough information to pre-identify potential hurdles that could inform policy makers where, and how, the concept might work. It would have saved time, energy, and financial resources if North Carolina had done so before embarking to implement their program in the Jordan Lake Watershed. Copyright © 2017 Elsevier Ltd. All rights reserved.

  12. Air pollution studies in Chicago considering lake breeze events and land use

    Schmeling, M.; Treering, D. J.

    2008-12-01

    Trace elemental, ionic species and reactive trace gases were monitored and measured in Chicago air during the summers of 2002 to 2005. Weather data obtained for the same time periods provided information about major wind patterns. Sampling times and duration were selected to coincide with lake breezes, which occur with highest frequency in summer. Lake breezes were observed between 14 and 47 percent of total collection days per summer and appeared to be more frequent in the cooler summers of 2003 and 2004. Depending on the predominant wind direction on the day before, pollutants increased briefly during a lake breeze event. On days without the occurrence of a lake breeze, it was found that the highest concentrations of pollutants were transported by southerly wind currents. Some major sources, such as brick and cement manufacturing, steel industry and heavy road traffic, lay in the path of this wind current. Chicago area land use and transportation maps were analyzed using a Geographic Information System (GIS) to identify major industrial complexes, intermodal terminals, highways and railroads. We also included demographic information in the GIS maps to analyze whether certain population groups are disproportionally exposed to air pollution. Our results will not only be interesting for the science community, but also to policy makers when considering air pollutant exposure and are expected to inform decisions regarding air pollution policy in the future.

  13. Change detection studies in and around Kolleru Lake using high resolution data

    Rao, M.V.; Rao. K.H.; Ramana, I.V.; Sasamal, S.K.; Choudhury, S.B.; Bhan, S.K.

    with the administrative boundaries have been prepared. The satellite data from Landsat and IRS have been analysed and classified, after geometric rectification of the images. The area under fish culture in the lake in each mandal has been estimated and presented...

  14. The last snapshot of natural pelagic fish assemblage in Lake Turkana, Kenya: A hydroacoustic study

    Muška, Milan; Vašek, Mojmír; Modrý, David; Jirků, Miloslav; Ojwang, W. O.; Malala, J. O.; Kubečka, Jan

    2012-01-01

    Roč. 38, č. 1 (2012), s. 98-106 ISSN 0380-1330 R&D Projects: GA AV ČR(CZ) KJB600960813 Institutional support: RVO:60077344 Keywords : African lakes * acoustics * fish distribution * endorheic basin * lates Subject RIV: EH - Ecology, Behaviour Impact factor: 2.309, year: 2012

  15. Water quality and remote sensing: A case study of Lake Naivasha, Kenya

    Majozi, NP

    2012-10-01

    Full Text Available validation gave an RSME 0.24 and MAE 20%. Atmospheric correction processors, MERIS Neural Network processors, and the ODESA software, were applied to MERIS images. Eutrophic Lakes was the most accurate at 490nm with MAE 43% and RSME 0.49. The Zeu maps show...

  16. Reconstruction of historical atmospheric Pb using Dutch urban lake sediments: A Pb isotope study

    Walraven, N.; van Os, B.J.H.; Klaver, G.Th.; Middelburg, J.J.; Davies, G.R.

    2014-01-01

    Lake sediments provide a record of atmospheric Pb deposition and changes in Pb isotope composition. To our knowledge, such an approach has not previously been performed in The Netherlands or linked to national air monitoring data. Results are presented for Pb content and isotope composition of 137Cs

  17. Effects of Metalloporphyrins on Heme Oxygenase-1 Transcription: Correlative Cell Culture Assays Guide in Vivo Imaging

    Monica Hajdena-Dawson

    2003-07-01

    Full Text Available Heme oxygenase (HO is the rate-limiting step in the heme degradation pathway and is a potential target for the control, or prevention, of pathologic jaundice in neonates. Metalloporphyrins (Mps, a diverse set of synthetic derivatives of heme, can competitively inhibit the HO enzymes. However, certain Mps are phototoxic and some increase transcription of HO-1, the inducible HO isozyme. Therefore, effective development of this class of compounds as therapeutics for treating pathologic jaundice will require rapid and integrated biological screens to identify the most efficacious and safe Mps. To study the safety of these compounds, we assessed their cytotoxic effects and measured luciferase activity by bioluminescent imaging (BLI as an index of HO-1 transcription, first in live cell cultures and then in living transgenic reporter mice. A total of 12 Mps were first evaluated in the correlative cell culture assay. Based on results from this study, 2 Mps, zinc protoporphyrin (ZnPP and zinc bis glycol porphyrin (ZnBG, were selected for further studies in the live animal model. In vitro BLI showed ZnPP to be a strong inducer of HO-1 transcription in comparison to ZnBG, which showed minimal induction. Cytotoxicity studies revealed that ZnPP was phototoxic, whereas ZnBG had no effect on cell viability. In vivo BLI showed that both ZnPP and ZnBG had minimal effects on the levels of HO-1 transcription in the animals. Furthermore, serum enzyme assays indicated that neither caused detectable liver toxicity. These findings, and especially those with ZnBG, support the use of selected Mps as therapies for pathologic jaundice. Coupling the high throughput advantage of cell culture with the capability of imaging for whole-body temporal analyses could accelerate and refine the preclinical phases of drug development. Thus, this study serves as a model for understanding the effects of specific compounds in relation to defined targets using an integrated approach.

  18. Lake Cadagno

    Tonolla, Mauro; Storelli, Nicola; Danza, Francesco

    2017-01-01

    Lake Cadagno (26 ha) is a crenogenic meromictic lake located in the Swiss Alps at 1921 m asl with a maximum depth of 21 m. The presence of crystalline rocks and a dolomite vein rich in gypsum in the catchment area makes the lake a typical “sulphuretum ” dominated by coupled carbon and s