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Sample records for hemichordate ptychodera flava

  1. Taxonomy Icon Data: Ptychodera flava Eschscholtz (Acorn worm) [Taxonomy Icon

    Lifescience Database Archive (English)

    Full Text Available Ptychodera flava Eschscholtz (Acorn worm) Ptychodera flava Hemichordata Ptychodera_flava_L.png Ptycho...dera_flava_NL.png Ptychodera_flava_S.png Ptychodera_flava_NS.png http://biosciencedbc.jp/t...axonomy_icon/icon.cgi?i=Ptychodera+flava&t=L http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Ptychodera+fla...va&t=NL http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Ptychodera+flava&t=S htt...p://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Ptychodera+flava&t=NS http://togodb.biosciencedbc.jp/togodb/view/taxonomy_icon_comment_en?species_id=161 ...

  2. Dorsoventral patterning in hemichordates: insights into early chordate evolution.

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    Christopher J Lowe

    2006-09-01

    Full Text Available We have compared the dorsoventral development of hemichordates and chordates to deduce the organization of their common ancestor, and hence to identify the evolutionary modifications of the chordate body axis after the lineages split. In the hemichordate embryo, genes encoding bone morphogenetic proteins (Bmp 2/4 and 5/8, as well as several genes for modulators of Bmp activity, are expressed in a thin stripe of ectoderm on one midline, historically called "dorsal." On the opposite midline, the genes encoding Chordin and Anti-dorsalizing morphogenetic protein (Admp are expressed. Thus, we find a Bmp-Chordin developmental axis preceding and underlying the anatomical dorsoventral axis of hemichordates, adding to the evidence from Drosophila and chordates that this axis may be at least as ancient as the first bilateral animals. Numerous genes encoding transcription factors and signaling ligands are expressed in the three germ layers of hemichordate embryos in distinct dorsoventral domains, such as pox neuro, pituitary homeobox, distalless, and tbx2/3 on the Bmp side and netrin, mnx, mox, and single-minded on the Chordin-Admp side. When we expose the embryo to excess Bmp protein, or when we deplete endogenous Bmp by small interfering RNA injections, these expression domains expand or contract, reflecting their activation or repression by Bmp, and the embryos develop as dorsalized or ventralized limit forms. Dorsoventral patterning is independent of anterior/posterior patterning, as in Drosophila but not chordates. Unlike both chordates and Drosophila, neural gene expression in hemichordates is not repressed by high Bmp levels, consistent with their development of a diffuse rather than centralized nervous system. We suggest that the common ancestor of hemichordates and chordates did not use its Bmp-Chordin axis to segregate epidermal and neural ectoderm but to pattern many other dorsoventral aspects of the germ layers, including neural cell fates

  3. Orobanche flava Mart. ex F.W. Schultz (Orobanchaceae: en la Península Ibérica

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    Pujadas Salvá, Antonio J.

    2003-12-01

    Full Text Available Orobanche flava is reported in the N of the Iberian Península. Its diversity and distribution is analyzed for the península: var. flava in the Pyrenees and var. albicans Rhiner in the Cantabrian Mountain chain. Lectotypification of O. flava var. albicans Rhiner [ZT] is proposed. To facilítate the identification of O. flava we emphasize its differential morphological characters and an original icon is contributed.Se indica la presencia de Orobanche flava en el N de la Península Ibérica. Se analiza su diversidad y su distribución en el territorio: var. flava en el Pirineo y var. albicans Rhiner en la Cordillera Cantábrica. Se propone el lectótipo de O. flava var. albicans Rhiner [ZT]. Para facilitar la identificación de O. flava destacamos sus caracteres morfológicos diferenciales y aportamos un icono original.

  4. Orobanche flava (Orobanchaceae in Poland: current distribution, taxonomy, hosts and plant communities

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    Piwowarczyk Renata

    2014-06-01

    Full Text Available Orobanche flava is a species of Central European mountain ranges, mainly the Alps and Carpathian Mts. The paper presents the current distribution of O. flava in Poland based on a critical revision of herbarium and literature data as well as results of field investigations conducted between 1999 and 2014. The distribution of species is centered in southern Poland, mainly in the Carpathian Mts., and, sporadically, in the Sudeten Mts. The distribution of O. flava in Poland is mapped. The taxonomy, biology, and ecology are also discussed.

  5. Carex flava agg. (section Ceratocystis, Cyperaceae in Poland: taxonomy, morphological variation, and soil conditions

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    Więcław Helena

    2014-03-01

    Full Text Available Sedges of Carex flava agg., typical of moist or wet habitats, are difficult to classify because of a lack of clear-cut morphological differences between them and the existence of numerous hybrids. This monograph presents results of research conducted in 2007-2012 in various parts of Poland. The plant material consisted of 1852 living specimens of Carex flava agg., collected from 80 localities, and dried specimens from 26 herbaria and from 7 private collections. The analysis involved 45 morphological characters (34 quantitative and 11 qualitative and 9 soil parameters. Univariate, bivariate, and multivariate statistical methods were used to process the data. The results confirm the taxonomic classification dividing the C. flava group into 4 species: C. flava s.s., C. lepidocarpa, C. demissa, and C. viridula. This classification is based on (i a high observed level of morphological separation of these taxa, resulting mostly from differences in generative characters, i.e. length of the utricle and its beak, and percentage ratio of beak length to total utricle length; (ii integrity of the taxa at the sites where they coexist, although some intermediate forms resulting from hybridization are also present; (iii habitat preferences of the taxa, especially the preference of C. lepidocarpa for calcareous sites and of C. demissa for slightly acidic soils. Thus in Poland the analysed taxa are morphologically well-defined and show clear ecological preferences. Continuous variation of morphological characters was observed among specimens of C. viridula, so it is not justifiable to distinguish its subspecies (sometimes classified even as separate species, described previously in literature. Consequently, the 2 subgroups of C. viridula were treated as local variants (i.e. varieties: var. viridula and var. pulchella, considering their different habitat requirements. Additionally, 5 hybrids were distinguished within C. flava agg.: C. ×alsatica [= C. demissa

  6. Removal of mercury from gold mine effluents using Limnocharis flava in constructed wetlands.

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    Marrugo-Negrete, José; Enamorado-Montes, Germán; Durango-Hernández, José; Pinedo-Hernández, José; Díez, Sergi

    2017-01-01

    Phytoremediation has received increased attention over the recent decades, as an emerging and eco-friendly approach that utilizes the natural properties of plants to remediate contaminated water, soils or sediments. The current study provides information about a pilot-scale experiment designed to evaluate the potential of the anchored aquatic plant Limnocharis flava for phytoremediation of water contaminated with mercury (Hg), in a constructed wetland (CW) with horizontal subsurface flow (HSSF). Mine effluent used in this experiment was collected from a gold mining area located at the Alacran mine in Colombia (Hg: 0.11 ± 0.03 μg mL -1 ) and spiked with HgNO 3 (1.50 ± 0.09 μg mL -1 ). Over a 30 day test period, the efficiency of the reduction in the heavy metal concentration in the wetlands, and the relative metal sorption by the L. flava, varied according to the exposure time. The continued rate of removal of Hg from the constructed wetland was 9 times higher than the control, demonstrating a better performance and nearly 90% reduction in Hg concentrations in the contaminated water in the presence of L. flava. The results in this present study show the great potential of the aquatic macrophyte L. flava for phytoremediation of Hg from gold mining effluents in constructed wetlands. Copyright © 2016 Elsevier Ltd. All rights reserved.

  7. Effect of ligamenta flava hypertrophy on lumbar disc herniation with contralateral symptoms and signs: a clinical and morphometric study

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    Yildizhan, Ahmet; Atar, Elmas K.; Yaycioglu, Soner; Gocmen-Mas, Nuket; Yazici, Canan

    2010-01-01

    Introduction The purpose of this study was to determine whether ligamentum flavum hypertrophy among disc herniated patients causes contralateral pain symptoms. For this reason we measured the thickness of the ligament in disc herniated patients with ipsilateral or contralateral symptoms. Material and methods Two hundred disc herniated patients with ipsilateral symptoms as group I were compared with five disc herniated patients with only contralateral symptoms as group II. Ligamenta flava thicknesses and spinal canal diameters of both groups were measured on magnetic resonance imaging (MRI) with a micro-caliper. Results Both groups underwent surgery only on the disc herniated side. The total thicknesses of the ligamenta flava in group II was thicker than in group I. There was no spinal stenosis in either group and no significance difference between the groups. Statistically significant differences were found for both ipsilateral and contralateral thickness of the ligament flava in both groups. We also compared thickness of the ligamenta flava for each level of disc herniation in group I; ligamenta flava hypertrophy was more common at L3-L4 and L4-L5 levels of vertebrae in females. Conclusions Aetiology of contralateral sciatica among disc herniated patients may be related to hypertrophy of the ligamenta flava, especially on the opposite side. Surgical approaches of the disc herniated side alone may be sufficient for a good outcome. PMID:22371809

  8. Evaluation of Antimicrobial and Wound Healing Potential of Justicia flava and Lannea welwitschii

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    Christian Agyare

    2013-01-01

    Full Text Available Microbial infections of various types of wounds are a challenge to the treatment of wounds and wound healing. The aim of the study is to determine the antimicrobial, antioxidant, and in vivo wound healing properties of methanol leaf extracts of Justicia flava and Lannea welwitschii. The antimicrobial activity was investigated using agar well diffusion and microdilution methods. The free radical scavenging activity of the methanol leaf extracts was performed using 1,1-diphenyl-2-picryl-hydrazyl (DPPH. The rate of wound contraction was determined using excision model. The test organisms used were Escherichia coli ATCC 25922, Pseudomonas aeruginosa ATCC 4853, Bacillus subtilis NTCC 10073, Staphylococcus aureus ATCC 25923, and clinical strains of Candida albicans. The MICs of methanol leaf extract of J. flava against test organisms were E. coli (7.5 mg/mL; P. aeruginosa (7.5 mg/mL; S. aureus (5 mg/mL; B. subtilis (7.5 mg/mL; and C. albicans (5 mg/mL. The MICs of methanol leaf extract of L. welwitschii against test organisms were E. coli (5 mg/mL; P. aeruginosa (10 mg/mL; S. aureus (5 mg/mL; B. subtilis (2.5 mg/mL; and C. albicans (2.5 mg/mL. The MBC/MFC of the extract was between 10 and 50 mg/mL. The IC50 of the reference antioxidant, α-tocopherol, was 1.5 μg/mL and the methanol leaf extracts of J. flava and L. welwitschii had IC50 of 65.3 μg/mL and 81.8 μg/mL, respectively. The methanol leaf extracts of J. flava and L. welwitschii gave a significant reduction in wound size as compared to the untreated. The rates of wound closure after the application of the extracts (7.5% w/w were compared to the untreated wounds. On the 9th day, J. flava extract had a percentage wound closure of 99% and that of L. welwitschii exhibited wound closure of 95% on the 13th day compared to the untreated wounds. The two extracts significantly increased the tensile strength of wounds compared to the untreated wounds. The extracts treated

  9. Anteroposterior axis patterning by early canonical Wnt signaling during hemichordate development

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    Darras, Sébastien; Fritzenwanker, Jens H.; Uhlinger, Kevin R.; Farrelly, Ellyn; Pani, Ariel M.; Hurley, Imogen A.; Norris, Rachael P.; Osovitz, Michelle; Terasaki, Mark; Wu, Mike; Aronowicz, Jochanan; Kirschner, Marc; Gerhart, John C.

    2018-01-01

    The Wnt family of secreted proteins has been proposed to play a conserved role in early specification of the bilaterian anteroposterior (A/P) axis. This hypothesis is based predominantly on data from vertebrate embryogenesis as well as planarian regeneration and homeostasis, indicating that canonical Wnt (cWnt) signaling endows cells with positional information along the A/P axis. Outside of these phyla, there is strong support for a conserved role of cWnt signaling in the repression of anterior fates, but little comparative support for a conserved role in promotion of posterior fates. We further test the hypothesis by investigating the role of cWnt signaling during early patterning along the A/P axis of the hemichordate Saccoglossus kowalevskii. We have cloned and investigated the expression of the complete Wnt ligand and Frizzled receptor complement of S. kowalevskii during early development along with many secreted Wnt modifiers. Eleven of the 13 Wnt ligands are ectodermally expressed in overlapping domains, predominantly in the posterior, and Wnt antagonists are localized predominantly to the anterior ectoderm in a pattern reminiscent of their distribution in vertebrate embryos. Overexpression and knockdown experiments, in combination with embryological manipulations, establish the importance of cWnt signaling for repression of anterior fates and activation of mid-axial ectodermal fates during the early development of S. kowalevskii. However, surprisingly, terminal posterior fates, defined by posterior Hox genes, are unresponsive to manipulation of cWnt levels during the early establishment of the A/P axis at late blastula and early gastrula. We establish experimental support for a conserved role of Wnt signaling in the early specification of the A/P axis during deuterostome body plan diversification, and further build support for an ancestral role of this pathway in early evolution of the bilaterian A/P axis. We find strong support for a role of cWnt in

  10. Phytofiltration of cadmium from water by Limnocharis flava (L.) Buchenau grown in free-floating culture system

    International Nuclear Information System (INIS)

    Abhilash, P.C.; Pandey, Vimal Chandra; Srivastava, Pankaj; Rakesh, P.S.; Chandran, Smitha; Singh, Nandita; Thomas, A.P.

    2009-01-01

    A hydroponics experiment was conducted to examine the phytofiltration of Cd by Limnocharis flava (L.) Buchenau grown in low-level Cd-contaminated water. For this, 45 d old seedlings of L .flava were transferred to a floating-support culture system containing nutrient solution spiked with four levels of Cd (0.5, 1, 2 and 4 mg l -1 ) and were separately harvested after 3, 7, 21 and 30 d. After 30 d harvesting, the percentage removal of Cd from the above four treatments reached up to 98, 96, 95 and 93%, respectively. Interestingly, all treatments had higher growth rate than control at 95% confidence level and plants still remained healthy at 4 mg l -1 Cd exposure. The bioaccumulation study showed a linear relationship of Cd (R 2 = 0.896-0.999) in all plant parts with the exposure time (3-30 d) and Cd concentrations in hydroponics system (0.5-4 mg l -1 ). Although, the root of L. flava had higher Cd concentration than leaf and peduncles, the total Cd concentrations in aerial plant parts were higher than the roots. The maximum bioconcentration factor (BCF) and translocation factor (TF) value of L. flava were calculated as 984.42 and 1.43, respectively. Estimated Cd accumulation capacity of L. flava per unit area (m 2 ) was found to be in the range of 218. 35-1698.92 mg m -2 .The experimental results demonstrated that L. flava is a suitable candidate for the phytofiltartion (>93%) of Cd from low-level Cd-contaminated water.

  11. Phytofiltration of cadmium from water by Limnocharis flava (L.) Buchenau grown in free-floating culture system

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    Abhilash, P.C., E-mail: pcabhilash@gmail.com [Eco-Auditing Group, National Botanical Research Institute, Council of Scientific and Industrial Research, Rana Pratap Marg, Lucknow-226 001, Uttar Pradesh (India); School of Environmental Sciences, Mahatma Gandhi University, Priyadharshini Hills P.O., Kottayam- 686 008, Kerala (India); Pandey, Vimal Chandra; Srivastava, Pankaj [Eco-Auditing Group, National Botanical Research Institute, Council of Scientific and Industrial Research, Rana Pratap Marg, Lucknow-226 001, Uttar Pradesh (India); Rakesh, P.S.; Chandran, Smitha [School of Environmental Sciences, Mahatma Gandhi University, Priyadharshini Hills P.O., Kottayam-686 008, Kerala (India); Singh, Nandita [Eco-Auditing Group, National Botanical Research Institute, Council of Scientific and Industrial Research, Rana Pratap Marg, Lucknow-226 001, Uttar Pradesh (India); Thomas, A.P. [School of Environmental Sciences, Mahatma Gandhi University, Priyadharshini Hills P.O., Kottayam-686 008, Kerala (India)

    2009-10-30

    A hydroponics experiment was conducted to examine the phytofiltration of Cd by Limnocharis flava (L.) Buchenau grown in low-level Cd-contaminated water. For this, 45 d old seedlings of L .flava were transferred to a floating-support culture system containing nutrient solution spiked with four levels of Cd (0.5, 1, 2 and 4 mg l{sup -1}) and were separately harvested after 3, 7, 21 and 30 d. After 30 d harvesting, the percentage removal of Cd from the above four treatments reached up to 98, 96, 95 and 93%, respectively. Interestingly, all treatments had higher growth rate than control at 95% confidence level and plants still remained healthy at 4 mg l{sup -1} Cd exposure. The bioaccumulation study showed a linear relationship of Cd (R{sup 2} = 0.896-0.999) in all plant parts with the exposure time (3-30 d) and Cd concentrations in hydroponics system (0.5-4 mg l{sup -1}). Although, the root of L. flava had higher Cd concentration than leaf and peduncles, the total Cd concentrations in aerial plant parts were higher than the roots. The maximum bioconcentration factor (BCF) and translocation factor (TF) value of L. flava were calculated as 984.42 and 1.43, respectively. Estimated Cd accumulation capacity of L. flava per unit area (m{sup 2}) was found to be in the range of 218. 35-1698.92 mg m{sup -2}.The experimental results demonstrated that L. flava is a suitable candidate for the phytofiltartion (>93%) of Cd from low-level Cd-contaminated water.

  12. Phytofiltration of cadmium from water by Limnocharis flava (L.) Buchenau grown in free-floating culture system.

    Science.gov (United States)

    Abhilash, P C; Pandey, Vimal Chandra; Srivastava, Pankaj; Rakesh, P S; Chandran, Smitha; Singh, Nandita; Thomas, A P

    2009-10-30

    A hydroponics experiment was conducted to examine the phytofiltration of Cd by Limnocharis flava (L.) Buchenau grown in low-level Cd-contaminated water. For this, 45 d old seedlings of L .flava were transferred to a floating-support culture system containing nutrient solution spiked with four levels of Cd (0.5, 1, 2 and 4 mg l(-1)) and were separately harvested after 3, 7, 21 and 30 d. After 30 d harvesting, the percentage removal of Cd from the above four treatments reached up to 98, 96, 95 and 93%, respectively. Interestingly, all treatments had higher growth rate than control at 95% confidence level and plants still remained healthy at 4 mg l(-1) Cd exposure. The bioaccumulation study showed a linear relationship of Cd (R(2)=0.896-0.999) in all plant parts with the exposure time (3-30 d) and Cd concentrations in hydroponics system (0.5-4 mg l(-1)). Although, the root of L. flava had higher Cd concentration than leaf and peduncles, the total Cd concentrations in aerial plant parts were higher than the roots. The maximum bioconcentration factor (BCF) and translocation factor (TF) value of L. flava were calculated as 984.42 and 1.43, respectively. Estimated Cd accumulation capacity of L. flava per unit area (m(2)) was found to be in the range of 218. 35-1698.92 mg m(-2).The experimental results demonstrated that L. flava is a suitable candidate for the phytofiltartion (>93%) of Cd from low-level Cd-contaminated water.

  13. CT and MRI characteristics of ossification of the ligamenta flava in the thoracic spine

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    Xiong, L. [Dept. of Radiology, University of Texas Health Science Center, San Antonio, TX (United States); Zeng, Q.Y. [Dept. of Radiology, General Coal Hospital, Beijing (China); Jinkins, J.R. [Dept. of Radiology, School of Medicine, Philadelphia, PA (United States)

    2001-09-01

    The purpose of this study was to compare MRI findings with CT findings of mass-forming calcification/ossification of the thoracic ligamenta flava (OTLF). Twenty-one Chinese patients presented with clinical evidence of chronic and progressive thoracic spinal cord compression which included: difficulty in walking; weakness; and/or numbness of the extremities, back pain, and lower extremity paresthesias. Axial and sagittal T1-weighted imaging (T1WI) and T2-weighted imaging (T2WI) were performed through the thoracic spine on a 1.0-T Impact unit (Siemens, Erlangen, Germany). Axial CT was obtained with 5-mm contiguous sections through the thoracic region. Decompressive surgery with resection of the OTLF were carried out in all patients. Low signal intensity of the mass-forming OTLF was demonstrated at a single level (n=1) or at multiple levels (n=20) on both T1WI and T2WI. The distribution of OTLF was bilateral at all levels identified in 6 cases, unilateral at all levels in 5 patients, and both unilateral and bilateral at different levels in 10 cases. Ossification of the thoracic ligamenta flava involved the upper thoracic spine (T1-4) in 3 cases, midthoracic spine (T5-8) in 3 cases, lower thoracic spine (T9-12) in 10 cases, and more than one thoracic spinal subregion in 5 cases. Computed tomography confirmed the MR findings regarding the location and distribution of OTLF in all cases, as well as the associated evidence of central spinal canal stenosis. In addition, 5 patients revealed associated ossification of the posterior longitudinal ligament. All patients demonstrated gradual, but incomplete, clinical improvement of the radiculomyelopathy following decompressive surgery. Ossification of the posterior longitudinal ligament resulting in thoracic central spinal canal stenosis and clinical radiculomyelopathy is not uncommon in the Asian people. Ossification of the thoracic ligamenta flava can be accurately evaluated equally well by CT and MR with regard to level

  14. CT and MRI characteristics of ossification of the ligamenta flava in the thoracic spine

    International Nuclear Information System (INIS)

    Xiong, L.; Zeng, Q.Y.; Jinkins, J.R.

    2001-01-01

    The purpose of this study was to compare MRI findings with CT findings of mass-forming calcification/ossification of the thoracic ligamenta flava (OTLF). Twenty-one Chinese patients presented with clinical evidence of chronic and progressive thoracic spinal cord compression which included: difficulty in walking; weakness; and/or numbness of the extremities, back pain, and lower extremity paresthesias. Axial and sagittal T1-weighted imaging (T1WI) and T2-weighted imaging (T2WI) were performed through the thoracic spine on a 1.0-T Impact unit (Siemens, Erlangen, Germany). Axial CT was obtained with 5-mm contiguous sections through the thoracic region. Decompressive surgery with resection of the OTLF were carried out in all patients. Low signal intensity of the mass-forming OTLF was demonstrated at a single level (n=1) or at multiple levels (n=20) on both T1WI and T2WI. The distribution of OTLF was bilateral at all levels identified in 6 cases, unilateral at all levels in 5 patients, and both unilateral and bilateral at different levels in 10 cases. Ossification of the thoracic ligamenta flava involved the upper thoracic spine (T1-4) in 3 cases, midthoracic spine (T5-8) in 3 cases, lower thoracic spine (T9-12) in 10 cases, and more than one thoracic spinal subregion in 5 cases. Computed tomography confirmed the MR findings regarding the location and distribution of OTLF in all cases, as well as the associated evidence of central spinal canal stenosis. In addition, 5 patients revealed associated ossification of the posterior longitudinal ligament. All patients demonstrated gradual, but incomplete, clinical improvement of the radiculomyelopathy following decompressive surgery. Ossification of the posterior longitudinal ligament resulting in thoracic central spinal canal stenosis and clinical radiculomyelopathy is not uncommon in the Asian people. Ossification of the thoracic ligamenta flava can be accurately evaluated equally well by CT and MR with regard to level

  15. Effect of temperature on development and the histology of the neuroendocrine system of the tettigoniid, Jamaicana flava (Caudell)

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    Peacock, A J; Anstee, J H; Bowler, K

    1977-01-01

    The effect of various constant temperatures on the rate of development and histology of the neuroendocrine system have been studied in sixth instar larvae of Jamaicana flava. Changes in the histology of the neuroendocrine system are discussed in relation to parallel changes in the rate of development. Temperature increases the rate up to a maximum beyond which further increases are not effective in terms of acceleration of development. For Jamaicana this rate is maximal at ca. 30/sup 0/C, higher temperatures producing a reduction in the rate of development.

  16. Parvularcula flava sp. nov., an alphaproteobacterium isolated from surface seawater of the South China Sea.

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    Zhang, Xin-Qi; Wu, Yue-Hong; Zhou, Xiang; Zhang, Xin; Xu, Xue-Wei; Wu, Min

    2016-09-01

    An aerobic, coccoid to short rod, yellow-pigmented, non-sporulating and Gram-staining-negative bacterium, designated NH6-79T, was isolated from surface seawater of the South China Sea. The isolate was motile with a polar flagellum. Growth was observed at 4-42 °C (optimum 37 °C), at pH 6.0-8.5 (optimum pH 7.0), and with 0.5-11 % (w/v) NaCl (optimum 4.5 %) and 1.5-17 % (w/v) sea salt (optimum 3.5-5 %). Strain NH6-79T could decompose peptone to produce H2S, but could not hydrolyse skimmed milk. Phylogenetic analysis based on 16S rRNA gene sequences indicated that strain NH6-79T had the closest affinity to the genus Parvularcula, sharing the highest 16S rRNA gene sequence similarity with 'Parvularcula oceanus' JLT2013 (94.1 %), Parvularcula lutaonensis CC-MMS-1T (93.4 %), Parvularcula dongshanensis SH25T (92.9 %) and Parvularcula bermudensis HTCC2503T (92.7 %), and lower sequence similarities (<90 %) with all other genera. The dominant fatty acids were C18 : 1ω7c and C16 : 0. The polar lipid profile was mainly composed of three unidentified glycolipids. The predominant isoprenoid quinone was ubiquinone-10. The DNA G+C content was 60.7 mol%. Based on the polyphasic taxonomic characterization, strain NH6-79T is considered to represent a novel species of the genus Parvularcula, for which the name Parvularcula flava sp. nov. is proposed. The type strain is NH6-79T (=CGMCC 1.14984T=JCM 30557T=MCCC 1K00277T).

  17. Eco-distribution Mapping of Invasive Weed Limnocharis flava (L. Buchenau Using Geographical Information System: Implications for Containment and Integrated Weed Management for Ecosystem Conservation

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    P. C. Abhilash

    2008-03-01

    Full Text Available Exotic weed invasion has been identified as one of the serious environmental problem impacting the structure, composition and function of biological diversity. They are aggressive colonizers, which have flexible habitat requirement and ability to outcompete native species. The present paper describes the distribution and autecology of an exotic weed Limnocharis flava (L. Buchenau (an emergent aquatic weed of ‘Limnocharitaceae’ in Kumarakom Grama Panchayat, one of the well known tourist spot of South India famous for its vast stretches of paddy fields, wetlands and backwaters. The mapping of L. flava in the entire study area has been done using Geographical Information System (Arc-info 8.3 version. The growth and distribution pattern of L. flava were studied quantitatively. Data on distribution, abundance, biomass, ecological associations and root zone nutrient quality of water and sediment samples were collected from different sampling points of Kumarakom. The study reflected that nutrients, water depth and land use patterns were the major factors responsible for the growth and proliferation of this exotic weed. The strategies for controlling L. flava invasion are discussed in detail. If early steps are not taken to eradicate this weed, it will become a problematic weed in the same way as other noxious aquatic weeds like Salvinia molesta D. Mitch and Eichhornia crassipes (C. Martius Solms-Laub.

  18. HPLC PROFILING OF PHENOLIC ACIDS AND FLAVONOIDS AND EVALUATION OF ANTI-LIPOXYGENASE AND ANTIOXIDANT ACTIVITIES OF AQUATIC VEGETABLE LIMNOCHARIS FLAVA.

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    Ooh, Keng-fei; Ong, Hean-Chooi; Wong, Fai-Chu; Chai, Tsun-Thai

    2015-01-01

    Limnocharis flava is an edible wetland plant, whose phenolic acid and flavonoid compositions as well as bioactivities were underexplored. This study analyzed the profiles of selected hydroxybenzoic acids, hydroxycinnamic acids and flavonoids in the aqueous extracts of L. flava leaf, rhizome and root by high performance liquid chromatography (HPLC). Anti-lipoxygenase and antioxidant (iron chelating, 2,2-diphenyl-l-picrylhydrazyl (DPPH) radical scavenging, and nitric oxide (NO) scavenging) activities of the extracts were also evaluated. Leaf extract had the highest phenolic contents, being most abundant in p-hydroxybenzoic acid (3861.2 nmol/g dry matter), ferulic acid (648.8 nmol/g dry matter), and rutin (4110.7 nmol/g dry matter). Leaf extract exhibited the strongest anti-lipoxygenase (EC50 6.47 mg/mL), iron chelating (EC50 6.65 mg/mL), DPPH scavenging (EC50 15.82 mg/mL) and NO scavenging (EC50 3.80 mg/mL) activities. Leaf extract also had the highest ferric reducing ability. This is the most extensive HPLC profiling of phenolic acids and flavonoids in L.flava to date. In conclusion, L. flava leaf is a source of health-promoting phenolics, anti-lipoxygenase agents and antioxidants.

  19. Characterization of Haemaphysalis flava (Acari: Ixodidae from Qingling subspecies of giant panda (Ailuropoda melanoleuca qinlingensis in Qinling Mountains (Central China by morphology and molecular markers.

    Directory of Open Access Journals (Sweden)

    Wen-yu Cheng

    Full Text Available Tick is one of important ectoparasites capable of causing direct damage to their hosts and also acts as vectors of relevant infectious agents. In the present study, the taxa of 10 ticks, collected from Qinling giant pandas (Ailuropoda melanoleuca qinlingensis in Qinling Mountains of China in April 2010, were determined using morphology and molecular markers (nucleotide ITS2 rDNA and mitochondrial 16S. Microscopic observation demonstrated that the morphological features of these ticks were similar to Haemaphysalis flava. Compared with other Haemaphysalis species, genetic variations between Haemaphysalis collected from A. m. qinlingensis and H. flava were the lowest in ITS2 rDNA and mitochondrial 16S, with sequence differences of 2.06%-2.40% and 1.30%-4.70%, respectively. Phylogenetic relationships showed that all the Haemaphysalis collected from A. m. qinlingensis were grouped with H. flava, further confirmed that the Haemaphysalis sp. is H. flava. This is the first report of ticks in giant panda by combining with morphology and molecular markers. This study also provided evidence that combining morphology and molecular tools provide a valuable and efficient tool for tick identification.

  20. The Effectivity of Scirpus Grossus and Limnocharis Flava as Fitoremediation Agents of Nitrate-Phosphate to Prevent Microcystis Blooming in Fresh Water Ecosystem

    OpenAIRE

    Sundari, Aliyah Siti; Retnaningdyah, Catur; Soeharjono, Soeharjono

    2013-01-01

    The aims of this study were to reduce the concentration of dissolved nitrate-phosphate, furthermore it can inhibit the growth and prevent the occurrence of Microcystis bloom waters. The study was conducted experimentally in the laboratory. The Microcystis isolation carried out in Sutami reservoir. Then, remediation treatment with hydromacrophyte (Scirpus grossus, Limnocharis flava and combination of both hydromicrophyte) were done during 15 day incubation period. Abiotic factors were measured...

  1. The Effectiveness of Scirpus grossus and Limnocharis flava as Fitoremediation Agents of Nitrate-Phosphate to Prevent Microcystis Blooming in Fresh Water Ecosystem

    OpenAIRE

    Aliyah Siti Sundari; Catur Retnaningdyah; Suharjono

    2013-01-01

    The aim of this study was to reduce the concentration of dissolved nitrate-phosphate, because it can prevent the occurrence and inhibit the growth of Microcystis bloom waters. The study was conducted experimentally in the laboratory. The Microcystis isolation was carried out in Sutami Reservoir. Then, remediation treatment with hydromacrophyte (Scirpus grossus, Limnocharis flava and combination of both hydromicrophyte) were done during the 15 day incubation period. Abiotic factors were meas...

  2. The Effectiveness of Scirpus grossus and Limnocharis flava as Fitoremediation Agents of Nitrate-Phosphate to Prevent Microcystis Blooming in Fresh Water Ecosystem

    Directory of Open Access Journals (Sweden)

    Aliyah Siti Sundari

    2013-04-01

    Full Text Available The aim of this study was to reduce the concentration of dissolved nitrate-phosphate, because it can prevent the occurrence and inhibit the growth of Microcystis bloom waters. The study was conducted experimentally in the laboratory. The Microcystis isolation was carried out in Sutami Reservoir. Then, remediation treatment with hydromacrophyte (Scirpus grossus, Limnocharis flava and combination of both hydromicrophyte were done during the 15 day incubation period. Abiotic factors were measured on day 0, 6, 12 and 15, but the abundance of Microcystis cells was counted daily. The productivity of hydromacrophyte was measured at the end of the research. The research results showed that hydromacrophytes were effective to reduce nitrate and phosphate concentrations. The combination of S. grossus and Microcystis reduced nitrate concentration up to 99.89 %, while the highest reduction of dissolved phosphate (98.22 % was resulted from the combination of L. flava and Microcystis. The combination treatment of L. flava and S. grossus was capable to prevent Microcystis growth rate and produced the carying capacity of 65 cells.L-1.day-1 and 6.93 x 104 cells/mL.

  3. Divergence of Populations of Yellow Wagtail, Motacilla flava, and Citrine wagtaill, Motacilla citreola (Motacillidae, Passeriformes, in the Middle Volga of Russia

    Directory of Open Access Journals (Sweden)

    Artemieva E. A.

    2016-04-01

    Full Text Available Blood samples of “yellow” wagtails collected in the areas geographically representing the Middle Volga breeding populations of these species were investigated. After isolation of mtDNA barkoding of studied “yellow” wagtails species was conducted. Amplification of the subunit of cytochrome oxidase I gene used as a genetic marker for the comparison of the samples was carried out. After sequencing and sequence alignment of gene cytochrome c-oxidase I, based on the comparison of genetic distances between individuals of the studied species using Jalview phylogenetic trees of populations of species Motacilla flava Linnaeus, 1758 and Motacilla citreola Pallas, 1776 were constructed.

  4. Cut from the same cloth: The convergent evolution of dwarf morphotypes of the Carex flava group (Cyperaceae) in Circum-Mediterranean mountains

    Science.gov (United States)

    Benítez-Benítez, Carmen; Fernández-Mazuecos, Mario; Martín-Bravo, Santiago

    2017-01-01

    Plants growing in high-mountain environments may share common morphological features through convergent evolution resulting from an adaptative response to similar ecological conditions. The Carex flava species complex (sect. Ceratocystis, Cyperaceae) includes four dwarf morphotypes from Circum-Mediterranean mountains whose taxonomic status has remained obscure due to their apparent morphological resemblance. In this study we investigate whether these dwarf mountain morphotypes result from convergent evolution or common ancestry, and whether there are ecological differences promoting differentiation between the dwarf morphotypes and their taxonomically related large, well-developed counterparts. We used phylogenetic analyses of nrDNA (ITS) and ptDNA (rps16 and 5’trnK) sequences, ancestral state reconstruction, multivariate analyses of macro- and micromorphological data, and species distribution modeling. Dwarf morphotype populations were found to belong to three different genetic lineages, and several morphotype shifts from well-developed to dwarf were suggested by ancestral state reconstructions. Distribution modeling supported differences in climatic niche at regional scale between the large forms, mainly from lowland, and the dwarf mountain morphotypes. Our results suggest that dwarf mountain morphotypes within this sedge group are small forms of different lineages that have recurrently adapted to mountain habitats through convergent evolution. PMID:29281689

  5. Functional histology of the macula flava in the human vocal fold--Part 1: its role in the adult vocal fold.

    Science.gov (United States)

    Sato, Kiminori; Umeno, Hirohito; Nakashima, Tadashi

    2010-01-01

    This study aims to clarify the role of the maculae flavae (MFe) in the human adult vocal fold mucosa (VFM). Our current results concerning MFe in the human adult VFM are summarized. MFe were found to be composed of dense masses of vocal fold stellate cells (VFSCs) and extracellular matrices (EM), such as fibrous proteins and glycosaminoglycans, which are essential for the EM in the human VFM. VFSCs in the MFe demonstrated marked morphologic differences from conventional fibroblasts. They were irregular and stellate in shape and possessed slender cytoplasmic processes. They had well-developed intracellular organelles. A number of vesicles were present at the periphery of the cytoplasm. They constantly synthesized EM. The VFSCs possessed lipid droplets and stored vitamin A. VFSCs formed an independent cell category of cells in the human VFM. The VFSCs in aged adult MFe decreased their activity, and had abnormal metabolism. Human MFe including VFSCs seem to be involved in the metabolism of EM which are essential for the viscoelasticity of the lamina propria of the VFM, and to be responsible for maintaining the characteristic layered structure of the human VFM. Age-related changes in VFSCs were found to influence the metabolism of EM in the VFM. (c) 2010 S. Karger AG, Basel.

  6. Functional histology of the macula flava in the human vocal fold--Part 2: Its role in the growth and development of the vocal fold.

    Science.gov (United States)

    Sato, Kiminori; Umeno, Hirohito; Nakashima, Tadashi

    2010-01-01

    This study aims to clarify the role of the maculae flavae (MFe) during growth and development of the human vocal fold mucosa (VFM). Our current results concerning the MFe in the human newborn, infant, and child VFM are summarized. Newborns already had immature MFe at the same sites as adults. They were composed of dense masses of vocal fold stellate cells (VFSCs), whereas extracellular matrix components were sparse. VFSCs in the newborn MFe had already started synthesizing extracellular matrices (EM). During infancy, the EM synthesized in the MFe appeared in the VFM to initiate the formation of the three-dimensional extracellular matrix structure of the human VFM. During childhood, MFe including VFSCs continued to synthesize EM such as collagenous, reticular, and elastic fibers, and hyaluronic acid (glycosaminoglycan), which are essential for the human VFM as a vibrating tissue. The MFe in newborns, infants and children were related to the growth and development of the human VFM. Human MFe including VFSCs were inferred to be involved in the metabolism of EM, essential for the viscoelasticity of the human VFM, and are considered to be an important structure in the growth and development of the human VFM. Copyright © 2010 S. Karger AG, Basel.

  7. Biology and distribution of hemichordates (Enteropneusta) with emphasis on Harrimaniidae and description of Protoglossus bocki sp. nov. from Scandinavia

    DEFF Research Database (Denmark)

    Cedhagen, Tomas; Hansson (†), Hans G.

    2013-01-01

    . The thickest part is the collar region where it can be up to 1 mm in diameter. Proboscis colouration light pink to golden yellow; collar white with transversal yellow bands; branchial, hepatic and intestinal regions translucent pale yellow to golden yellow; brown intestine visible through the body wall...

  8. Biology and distribution of hemichordates (Enteropneusta) with emphasis on Harrimaniidae and description of Protoglossus bocki sp. nov. from Scandinavia

    Science.gov (United States)

    Cedhagen, Tomas; Hansson, Hans G.

    2013-06-01

    A new species of the genus Protoglossus is described from the west coast of the Scandinavian Peninsula. It lives buried in clay bottoms below the halocline where the salinity is at least 33-34 psu. Body small, estimated maximal length 1.5 cm. Collar broader than long, with a forward inclination. The thickest part is the collar region where it can be up to 1 mm in diameter. Proboscis colouration light pink to golden yellow; collar white with transversal yellow bands; branchial, hepatic and intestinal regions translucent pale yellow to golden yellow; brown intestine visible through the body wall. Proboscis groove extends through posterior half of proboscis. Nine to 17 pairs of gill openings, the size of the posteriormost successively smaller. It differs from the other European species, Protoglossus koehleri, in colouration, smaller size, fewer gill openings, body shape and proportions. It was sequenced (18S rRNA gene) and clustered within the family Harrimaniidae, with Saxipendium as its closest relative.

  9. A case of ossified yellow ligaments (ossified ligamenta flava) in thoraco-lumbar region and magnetic resonance imaging

    International Nuclear Information System (INIS)

    Yatsuzuka, Hitoshi; Kitajima, Tomohide; Taguchi, Yoshio; Sakai, Haruo; Nakamura, Norio

    1986-01-01

    A Case of ossified yellow ligaments in thoracolumbar region is reported. A 47-year-old-male complained of low back pain with suddenness in August, 1984. One month later, he noticed dysesthesia on his right lower extremity and gait disturbance. These symptoms progressed slowly. In June, 1985, he admitted to The Jikei University Hospital. On neurological examinations, he was noticed an intermittent claudication, spastic paraparesis and stocking type sensory loss in his lower extremities. Plain lumbar X-ray films showed ossified yellow ligaments (OYL) in the posterior half of the spinal canal from the level of 10th thoracic to second lumbar vertebrae. Magnetic resonance imaging disclosed marked indentations of the spinal cord at the same level. The wide laminectomy was carried out and OYL were removed totally in gentle manner. Postoperative course was uneventful. His sensory disorders improved remarkably and he gaind good muscle strength in his lower extremities, but a considerable spasticity remained still. OYL is closely related to the developmental canal stenosis, the spondylosis and the other degenerative disorders such as ossification of posterior longitudinal ligaments. This allows more complicated neurological signs and symptoms in the case of OYL. When OYL is suggested, it is recommended to performed whole spinal radiological survey. The surgical consideration should be done. From this point of view, MRI would be a most useful weapon. (author)

  10. Eksplorasi dan Karakterisasi Tanaman Genjer (Limnocharis flava (L. Buch di Kabupaten Pangandaran Berdasarkan Karakter Morfologi dan Agronomi

    Directory of Open Access Journals (Sweden)

    Liberty Chaidir

    2016-12-01

    Full Text Available Genjer merupakan tanaman yang tumbuh liar di area persawahan, rawa, atau sungai yang keberadaannya sering dianggap sebagai gulma. Tanaman genjer memiliki banyak manfaat, diantaranya sebagai bahan penyerap logam berat dalam tanah dan sebagai obat yang memiliki banyak kandungan gizi. Penelitian ini bertujuan untuk mengetahui variasi karakter morfologi dan karakter agronomi untuk mengetahui hubungan kekerabatan tanaman genjer antar daerah di Kabupaten Pangandaran. Penelitian dilaksanakan di Kabupaten Pangandaran pada Mei sampai Oktober 2015. Metode yang digunakan adalah metode eksplorasi purposive sampling pada 77 aksesi genjer yang diambil dari Kabupaten Pangandaran. Hasil penelitian menunjukkan terdapat keragaman fenotipik yang luas pada karakter morfologi ujung daun, warna batang, tekstur daun, warna daun, panjang lekukan bawah daun, warna kelopak bunga dan warna bunga. Karakter agronomi yang mempunyai keragaman yang luas ialah tinggi tanaman, jumlah batang per rumpun, panjang daun, lebar daun, jumlah daun, jumlah bunga dan diameter batang. Tanaman genjer di Kabupaten Pangandaran memiliki kekerabatan yang jauh dengan rentang jarak Euclidian 0,48 sampai 10,17. Aksesi yang memiliki hubungan kekerabatan paling jauh yaitu Ciakar (001 dengan jarak Euclidian 10,17, sedangkan yang memiliki hubungan kekerabatan paling dekat yaitu Cikalong (003 dan Cikalong (004 dengan jarak Euclidian 0,48. Genjer or Yellow velvetleaf is a plant that grows wild in lowland area, swamp or river which existence is considered as a weed. Genjer has a lot of benefits, such as material absorbent for heavy metals in the soil and medicine that has a lot of nutrition. This study aimed to determine the variety of morphological and agronomic characters of Genjer in Pangandaran Regency and to determine the genetic relationship of genjer between regions in Pangandaran. The research was conducted in the Pangandaran Regency on May to October 2015. The method used purposive sampling exploration method in 77 accession genjer collected from Pangandaran Regency. The results showed there were extensively phenotypic variation in tip of leaf, stem color, leaf texture, leaf color, length curve of bottom leaf, petal color and flower color. While agronomic characters for plant height, stem amount, leaf length, leaf width, leaf amount, flower amount and diameter of the stem had wide variation. Relationship between genjer in Pangandaran Regency had Euclidean distance with a range of 0.48 to 10.17. The accession which had the farthest distance was Ciakar (001 with Euclidean distance of 10.17, while those with the closest relationship were Cikalong (003 and Cikalong (004 with Euclidean distance of 0.48.

  11. A three-year demographic study of Harper's beauty (Harperocallis flava McDaniel), an endangered Florida endemic

    Science.gov (United States)

    Joan L. Walker; Andrea M. Silletti

    2005-01-01

    The longleaf pine ecosystem has high plant species richness, especially at small scales (Walker and Peet 1983, Peet and Allard 1993), and is characterized by a large number of narrowly endemic (Estill and Cruzan 2001, Le Blonde 2001, Sorrie and Weakley 2001) and rare species (Hardin and White 1989, Peet and Allard 1993, Walker 1993). Because of habitat loss and changes...

  12. Review of the North American species of Marimatha Walker with descriptions of three new species (Lepidoptera, Noctuidae, Eustrotiinae and the description of Pseudomarimatha flava (Noctuinae, Elaphriini, a new genus and species confused with Marimatha

    Directory of Open Access Journals (Sweden)

    Clifford Ferris

    2010-03-01

    Full Text Available Seven species of Marimatha Walker are examined, five of which occur in North America. In addition to the existing species M. nigrofimbria (Guenee, M. tripuncta (Moschler is reported from North America for the first time and three new species are described from southwestern North America: M. piscimala, M. squala, and M. quadrata. Marimatha alboflava (Walker, M. botyoides (Guenee, and M. dinumeratalis (Walker are discussed in terms of the generic name Marimatha, and M. aurifera (Walker is discussed in relation to the identity of M. tripuncta. A generic diagnosis, key to species, descriptions, and illustrations of adults and genitalia are included. A new genus and species is proposed for a species currently placed as an undescribed species of Marimatha, but tympanal and genital characters and mtDNA suggest an association with the subfamily Noctuinae, tribe Elaphriini.

  13. Über eine neue Dasyproctus-Art aus Java

    NARCIS (Netherlands)

    Kohl, Franz Friedr.

    1908-01-01

    ♂ — Long. 7—8 mm. Niger, ex magna parte (supra) opacus. Tergita 2., 3. et 4. utrinque maculata, 5. et 6. interrupte fasciata, hoc nonnunquam fascia integra flava. Flava sunt insuper: linea suprabasalis mandibularum, scapi ex parte, fascia interrupta collaris, alarum squamulae et 2—4 maculae

  14. Free-radical scavenging capacity and antimicrobial activity of wild ...

    African Journals Online (AJOL)

    ... Escherichia coli, Morganella morganii and Proteus vulgaris. The antimicrobial activity profile of R. flava against tested strains indicated that Micrococcus flavus, Micrococcus luteus and Yersinia enterocolitica was the most susceptible bacteria of all the test strains. R. flava was found to be inactive against Candida albicans.

  15. Genes Involved in the Evolution of Herbivory by a Leaf-Mining, Drosophilid Fly

    DEFF Research Database (Denmark)

    Whiteman, Noah K.; Gloss, Andrew D.; Sackton, Timothy B.

    2012-01-01

    a total of 341 transcripts that were differentially regulated by glucosinolate uptake in larval S. flava. Of these, approximately a third corresponded to homologs of Drosophila melanogaster genes associated with starvation, dietary toxin-, heat-, oxidation-, and aging-related stress. The upregulated...... the widely studied reference plant, Arabidopsis thaliana (Arabidopsis). Scaptomyza flava is phylogenetically nested within the paraphyletic genus Drosophila, and the whole genome sequences available for 12 species of Drosophila facilitated phylogenetic analysis and assembly of a transcriptome for S. flava....... The presence of glucosinolates in wild-type (WT) Arabidopsis plants reduced S. flava larval weight gain and increased egg-adult development time relative to flies reared in glucosinolate knockout (GKO) plants. An analysis of gene expression differences in 5-day-old larvae reared on WT versus GKO plants showed...

  16. Mining the plant-herbivore interface with a leafmining Drosophila of Arabidopsis

    Science.gov (United States)

    Whiteman, Noah K.; Groen, Simon C.; Chevasco, Daniela; Bear, Ashley; Beckwith, Noor; Gregory, T. Ryan; Denoux, Carine; Mammarella, Nicole; Ausubel, Frederick M.; Pierce, Naomi E.

    2010-01-01

    Experimental infections of Arabidopsis thaliana (Arabidopsis) with genomically characterized plant pathogens such as Pseudomonas syringae have facilitated dissection of canonical eukaryotic defense pathways and parasite virulence factors. Plants are also attacked by herbivorous insects, and the development of an ecologically relevant genetic model herbivore that feeds on Arabidopsis will enable the parallel dissection of host defense and reciprocal resistance pathways such as those involved in xenobiotic metabolism. An ideal candidate is Scaptomyza flava, a drosophilid fly whose leafmining larvae are true herbivores that can be found in nature feeding on Arabidopsis and other crucifers. Here we describe the eukaryotic life cycle of S. flava on Arabidopsis, and use multiple approaches to characterize the response of Arabidopsis to S. flava attack. Oviposition choice tests and growth performance assays on different Arabidopsis ecotypes, defense-related mutants, and hormone and chitin-treated plants revealed significant differences in host preference and variation in larval performance across Arabidopsis accessions. The jasmonate (JA) and glucosinolate pathways in Arabidopsis are important in mediating quantitative resistance against S. flava, and priming with JA or chitin resulted in increased resistance. Expression of xenobiotic detoxification genes was reduced in S. flava larvae reared on Arabidopsis JA signaling mutants, and increased in plants pre-treated with chitin. These results and future research directions are discussed in the context of developing a genetic model system to analyze insect/plant interactions. PMID:21073583

  17. Ancient deuterostome origins of vertebrate brain signalling centres.

    Science.gov (United States)

    Pani, Ariel M; Mullarkey, Erin E; Aronowicz, Jochanan; Assimacopoulos, Stavroula; Grove, Elizabeth A; Lowe, Christopher J

    2012-03-14

    Neuroectodermal signalling centres induce and pattern many novel vertebrate brain structures but are absent, or divergent, in invertebrate chordates. This has led to the idea that signalling-centre genetic programs were first assembled in stem vertebrates and potentially drove morphological innovations of the brain. However, this scenario presumes that extant cephalochordates accurately represent ancestral chordate characters, which has not been tested using close chordate outgroups. Here we report that genetic programs homologous to three vertebrate signalling centres-the anterior neural ridge, zona limitans intrathalamica and isthmic organizer-are present in the hemichordate Saccoglossus kowalevskii. Fgf8/17/18 (a single gene homologous to vertebrate Fgf8, Fgf17 and Fgf18), sfrp1/5, hh and wnt1 are expressed in vertebrate-like arrangements in hemichordate ectoderm, and homologous genetic mechanisms regulate ectodermal patterning in both animals. We propose that these genetic programs were components of an unexpectedly complex, ancient genetic regulatory scaffold for deuterostome body patterning that degenerated in amphioxus and ascidians, but was retained to pattern divergent structures in hemichordates and vertebrates. © 2012 Macmillan Publishers Limited. All rights reserved

  18. Analysis of coelom development in the sea urchin Holopneustes purpurescens yielding a deuterostome body plan

    Directory of Open Access Journals (Sweden)

    Valerie B. Morris

    2016-03-01

    Full Text Available An analysis of early coelom development in the echinoid Holopneustes purpurescens yields a deuterostome body plan that explains the disparity between the pentameral plan of echinoderms and the bilateral plans of chordates and hemichordates, the three major phyla of the monophyletic deuterostomes. The analysis shows an early separation into a medial hydrocoele and lateral coelomic mesoderm with an enteric channel between them before the hydrocoele forms the pentameral plan of five primary podia. The deuterostome body plan thus has a single axial or medial coelom and a pair of lateral coeloms, all surrounding an enteric channel, the gut channel. Applied to the phyla, the medial coelom is the hydrocoele in echinoderms, the notochord in chordates and the proboscis coelom in hemichordates: the lateral coeloms are the coelomic mesoderm in echinoderms, the paraxial mesoderm in chordates and the lateral coeloms in hemichordates. The plan fits frog and chick development and the echinoderm fossil record, and predicts genes involved in coelomogenesis as the source of deuterostome macroevolution.

  19. Anti-bacterial, free radical scavenging activity and cytotoxicity of ...

    African Journals Online (AJOL)

    2017-09-03

    Sep 3, 2017 ... Stella Makgabo Lamola1, Jean Paul Dzoyem1,2, Francien Botha1, Candice van Wyk3 ... Conclusion: Acetone extract of leaves and roots of Grewia flava contain anti-microbial ..... Sekirov I, Russels SL, Antunes CA, Finlay BB.

  20. New records of Megaselia (Diptera: Phoridae) reared from fungus sporophores in Japan, including five new species

    OpenAIRE

    Disney, R. Henry L.; Nitta, Masayuki; Kobayashi, Mio; Tuno, Nobuko

    2014-01-01

    Megaselia donaldsonae Disney sp. nov., M. flava (Fallén), M. gotoi Disney, M. kanekoi Disney, M. margaretae Disney sp. nov., M. nakayamai Disney sp. nov., M. salteri Disney sp. nov. and M. stepheni Disney sp. nov. were reared from sporophores of fungi.

  1. Evolution of bilaterian central nervous systems: a single origin?

    Science.gov (United States)

    2013-01-01

    The question of whether the ancestral bilaterian had a central nervous system (CNS) or a diffuse ectodermal nervous system has been hotly debated. Considerable evidence supports the theory that a CNS evolved just once. However, an alternative view proposes that the chordate CNS evolved from the ectodermal nerve net of a hemichordate-like ancestral deuterostome, implying independent evolution of the CNS in chordates and protostomes. To specify morphological divisions along the anterior/posterior axis, this ancestor used gene networks homologous to those patterning three organizing centers in the vertebrate brain: the anterior neural ridge, the zona limitans intrathalamica and the isthmic organizer, and subsequent evolution of the vertebrate brain involved elaboration of these ancestral signaling centers; however, all or part of these signaling centers were lost from the CNS of invertebrate chordates. The present review analyzes the evidence for and against these theories. The bulk of the evidence indicates that a CNS evolved just once – in the ancestral bilaterian. Importantly, in both protostomes and deuterostomes, the CNS represents a portion of a generally neurogenic ectoderm that is internalized and receives and integrates inputs from sensory cells in the remainder of the ectoderm. The expression patterns of genes involved in medio/lateral (dorso/ventral) patterning of the CNS are similar in protostomes and chordates; however, these genes are not similarly expressed in the ectoderm outside the CNS. Thus, their expression is a better criterion for CNS homologs than the expression of anterior/posterior patterning genes, many of which (for example, Hox genes) are similarly expressed both in the CNS and in the remainder of the ectoderm in many bilaterians. The evidence leaves hemichordates in an ambiguous position – either CNS centralization was lost to some extent at the base of the hemichordates, or even earlier, at the base of the hemichordates

  2. Modularity of gene-regulatory networks revealed in sea-star development

    Directory of Open Access Journals (Sweden)

    Degnan Bernard M

    2011-01-01

    Full Text Available Abstract Evidence that conserved developmental gene-regulatory networks can change as a unit during deutersostome evolution emerges from a study published in BMC Biology. This shows that genes consistently expressed in anterior brain patterning in hemichordates and chordates are expressed in a similar spatial pattern in another deuterostome, an asteroid echinoderm (sea star, but in a completely different developmental context (the animal-vegetal axis. This observation has implications for hypotheses on the type of development present in the deuterostome common ancestor. See research article: http://www.biomedcentral.com/1741-7007/8/143/abstract

  3. Effect of the application of 1-methylcyclopropene and wax emulsions on proximate analysis and some antioxidants of soursop (Annona muricata L.).

    Science.gov (United States)

    Moreno-Hernández, Cristina L; Sáyago-Ayerdi, Sonia G; García-Galindo, Hugo S; Mata-Montes De Oca, Miguel; Montalvo-González, Efigenia

    2014-01-01

    The effect of the application of 1-methylcyclopropene (1-MCP) and wax emulsions, alone or combined, on composition analysis, vitamin C, polyphenols, and antioxidant capacity of soursop was evaluated. Fruits were stored as follows: at 25 °C (control), and at 16 °C: fruits sprayed with candelilla or flava emulsions, fruits treated with 1500 nL/L of 1-MCP (20 °C, 12 h), and fruits treated with 1-MCP and then sprayed with emulsions. Fruits were allowed to ripen and the edible part was used for analysis. Only fruits stored at 16 °C without 1-MCP showed visible symptoms of chilling injury. Fruits treated with 1-MCP combined with flava emulsion maintained in greater extent their vitamin C content, dietary fiber, total phenolics content, and antioxidant activity. The combination of 1-MCP and emulsions can be utilized in postharvest handling of soursop because this combination can preserve its nutritional composition and antioxidant activity.

  4. New genera and species of gall midges (Diptera, Cecidomyiidae associated with Guarea macrophylla (Meliaceae Novos gêneros e espécies de mosquitos galhadores (Diptera, Cecidomyiidae associados com Guarea macrophylla (Meliaceae

    Directory of Open Access Journals (Sweden)

    Valéria Cid Maia

    2007-06-01

    Full Text Available Three distinct leaf galls are recorded on Guarea macrophylla (Meliaceae. The galling species were identified as Neolasioptera sp., Guareamyia purpura gen. nov. and sp. nov.; Sphaeramyia flava gen. nov. and sp.nov. The new genera and species are described and illustrated based on material collected at restinga areas in Bertioga (São Paulo, Brazil.Três galhas foliares distintas são registradas em Guarea macrophylla (Meliaceae. As espécies galhadoras foram identificadas como Neolasioptera sp., Guareamyia purpura gen. nov. e sp. nov..; Sphaeramyia flava gen. nov. e sp. nov. Os gêneros e espécies novas são descritos e ilustrados com base em material coletado em áreas de restinga em Bertioga (São Paulo, Brasil.

  5. The shape of the human lumbar vertebral canal

    OpenAIRE

    Zarzur,Edmundo

    1996-01-01

    Literature on the anatomy of the human vertebral column characterizes the shape of the lumbar vertebral canal as triangular. The purpose of the present study was to determine the precise shape of the lumbar vertebral canal. Ten lumbar vertebral columns of adult male cadavers were dissected. Two transverse sections were performed in the third lumbar vertebra. One section was performed at the level of the lower border of the ligamenta flava, and the other section was performed at the level of t...

  6. Aspidonepsis (Asclepiadaceae, a new southern African genus

    Directory of Open Access Journals (Sweden)

    A. Nicholas

    1992-10-01

    Full Text Available Aspidonepsis, an endemic southern African genus, is described and compared to the closely allied genus Aspidoglossum. This newly described genus is composed of two subgenera, Aspidonepsis and Unguilobium. consisting of three and two species respectively.  Asclepias diploglossa, A. flava, A. cognata and A. reneensis are transferred to Aspidonepsis. and A. shebae is newly described. All species are discussed, illustrated and a key is given to aid in their identification.

  7. 644-IJBCS-Article-Dr Thiery B C Alavo

    African Journals Online (AJOL)

    DR GATSING

    Ce criquet était abondant dans le champ et se nourrit des feuilles de H. suaveolens. Les jeunes plants étaient complètement détruits par ce ravageur qui consomme entièrement toutes les premières feuilles et le bourgeon terminal. Anomis (Cosmophila) flava (Lepidoptera: Noctuidae). Les chenilles de cette espèce se.

  8. A nationwide survey of ixodid tick species recovered from domestic dogs and cats in Japan in 2011.

    Science.gov (United States)

    Iwakami, Shinya; Ichikawa, Yasuaki; Inokuma, Hisashi

    2014-10-01

    A nationwide survey of ixodid ticks was performed in 2011, during which a total of 4237 and 298 ticks were recovered from 1162 dogs and 136 cats, respectively. Haemaphysalis longicornis was the most frequently found tick species on canine hosts (739 dogs), followed by H. flava (166), Ixodes ovatus (139), and Rhipicephalus sanguineus sensu lato (70). H. hystricis, H. japonica, H. megaspinosa, H. formosensis, H. campanulata, H. ias, I. nipponensis, I. persulcatus, and Amblyomma testudinarium were also recovered. H. longicornis was also the most frequently found species on feline hosts (52 cats), followed by I. ovatus (34), A. testudinarium (19), and H. flava (12). H. hystricis, H. japonica, H. megaspinosa, I. nipponensis, I. persulcatus, I. granulatus and R. sanguineus sensu lato were also recovered from cats. The three major species of ticks found on dogs and cats, H. longicornis, H. flava, and I. ovatus, displayed a wide geographical distribution, with specimens found throughout northern and southern Japan. R. sanguineus sensu lato was primarily recovered in Okinawa, but was also found in Kanagawa, Wakayama, Hiroshima, and Yamaguchi Prefectures. A. testudinarium was mainly distributed throughout western Japan, but small numbers were also recovered from Gumma and Shizuoka Prefectures. H. longicornis was more frequently found on dogs in rural areas than those in urban or suburban areas. Exposure to woodland environments was significantly associated with H. flava and I. ovatus in dogs. Dogs in urban or suburban areas encountered R. sanguineus sensu lato more often than other tick species. Most of the cats surveyed in the present study were from rural areas. In the present study, H. hystricis and R. sanguineus sensu lato were found on cats for the first time in Japan. Copyright © 2014 Elsevier GmbH. All rights reserved.

  9. Comparison of Ehrlichia muris Strains Isolated from Wild Mice and Ticks and Serologic Survey of Humans and Animals with E. muris as Antigen

    OpenAIRE

    Kawahara, Makoto; Ito, Tadahiko; Suto, Chiharu; Shibata, Shinichiro; Rikihisa, Yasuko; Hata, Kazuhisa; Hirai, Katsuya

    1999-01-01

    In metropolitan Tokyo, the Ehrlichia muris seropositivity rate of 24 wild mice was 63% in Hinohara Village, but in the surrounding areas, it was 0 to 5%. This finding suggests that the reservoir of E. muris is focal. Among the 15 seropositive mice, ehrlichiae were isolated from 9 Apodemus speciosus mice and 1 A. argenteus mouse, respectively. Five ehrlichial isolates were obtained from 10 ticks (Haemaphysalis flava) collected in Asuke Town, Aichi Prefecture, where the E. muris type strain had...

  10. Geographic variation in floral allometry suggests repeated transitions between selfing and outcrossing in a mixed mating plant.

    Science.gov (United States)

    Summers, Holly E; Hartwick, Sally M; Raguso, Robert A

    2015-05-01

    Isometric and allometric scaling of a conserved floral plan could provide a parsimonious mechanism for rapid and reversible transitions between breeding systems. This scaling may occur during transitions between predominant autogamy and xenogamy, contributing to the maintenance of a stable mixed mating system. We compared nine disjunct populations of the polytypic, mixed mating species Oenothera flava (Onagraceae) to two parapatric relatives, the obligately xenogamous species O. acutissima and the mixed mating species O. triloba. We compared floral morphology of all taxa using principal component analysis (PCA) and developmental trajectories of floral organs using ANCOVA homogeneity of slopes. The PCA revealed both isometric and allometric scaling of a conserved floral plan. Three principal components (PCs) explained 92.5% of the variation in the three species. PC1 predominantly loaded on measures of floral size and accounts for 36% of the variation. PC2 accounted for 35% of the variation, predominantly in traits that influence pollinator handling. PC3 accounted for 22% of the variation, primarily in anther-stigma distance (herkogamy). During O. flava subsp. taraxacoides development, style elongation was accelerated relative to anthers, resulting in positive herkogamy. During O. flava subsp. flava development, style elongation was decelerated, resulting in zero or negative herkogamy. Of the two populations with intermediate morphology, style elongation was accelerated in one population and decelerated in the other. Isometric and allometric scaling of floral organs in North American Oenothera section Lavauxia drive variation in breeding system. Multiple developmental paths to intermediate phenotypes support the likelihood of multiple mating system transitions. © 2015 Botanical Society of America, Inc.

  11. Histopathologic study of human vocal fold mucosa unphonated over a decade.

    Science.gov (United States)

    Sato, Kiminori; Umeno, Hirohito; Ono, Takeharu; Nakashima, Tadashi

    2011-12-01

    Mechanotransduction caused by vocal fold vibration could possibly be an important factor in the maintenance of extracellular matrices and layered structure of the human adult vocal fold mucosa as a vibrating tissue after the layered structure has been completed. Vocal fold stellate cells (VFSCs) in the human maculae flavae of the vocal fold mucosa are inferred to be involved in the metabolism of extracellular matrices of the vocal fold mucosa. Maculae flavae are also considered to be an important structure in the growth and development of the human vocal fold mucosa. Tension caused by phonation (vocal fold vibration) is hypothesized to stimulate the VFSCs to accelerate production of extracellular matrices. A human adult vocal fold mucosa unphonated over a decade was investigated histopathologically. Vocal fold mucosa unphonated for 11 years and 2 months of a 64-year-old male with cerebral hemorrhage was investigated by light and electron microscopy. The vocal fold mucosae (including maculae flavae) were atrophic. The vocal fold mucosa did not have a vocal ligament, Reinke's space or a layered structure. The lamina propria appeared as a uniform structure. Morphologically, the VFSCs synthesized fewer extracellular matrices, such as fibrous protein and glycosaminoglycan. Consequently, VFSCs appeared to decrease their level of activity.

  12. Evolution of extreme stomach pH in bilateria inferred from gastric alkalization mechanisms in basal deuterostomes.

    Science.gov (United States)

    Stumpp, Meike; Hu, Marian Y; Tseng, Yung-Che; Guh, Ying-Jeh; Chen, Yi-Chih; Yu, Jr-Kai; Su, Yi-Hsien; Hwang, Pung-Pung

    2015-06-08

    The stomachs of most vertebrates operate at an acidic pH of 2 generated by the gastric H(+)/K(+)-ATPase located in parietal cells. The acidic pH in stomachs of vertebrates is believed to aid digestion and to protect against environmental pathogens. Little attention has been placed on whether acidic gastric pH regulation is a vertebrate character or a deuterostome ancestral trait. Here, we report alkaline conditions up to pH 10.5 in the larval digestive systems of ambulacraria (echinoderm + hemichordate), the closest relative of the chordate. Microelectrode measurements in combination with specific inhibitors for acid-base transporters and ion pumps demonstrated that the gastric alkalization machinery in sea urchin larvae is mainly based on direct H(+) secretion from the stomach lumen and involves a conserved set of ion pumps and transporters. Hemichordate larvae additionally utilized HCO3(-) transport pathways to generate even more alkaline digestive conditions. Molecular analyses in combination with acidification experiments supported these findings and identified genes coding for ion pumps energizing gastric alkalization. Given that insect larval guts were also reported to be alkaline, our discovery raises the hypothesis that the bilaterian ancestor utilized alkaline digestive system while the vertebrate lineage has evolved a strategy to strongly acidify their stomachs.

  13. Microbial population analysis of the salivary glands of ticks; a possible strategy for the surveillance of bacterial pathogens.

    Directory of Open Access Journals (Sweden)

    Yongjin Qiu

    Full Text Available Ticks are one of the most important blood-sucking vectors for infectious microorganisms in humans and animals. When feeding they inject saliva, containing microbes, into the host to facilitate the uptake of blood. An understanding of the microbial populations within their salivary glands would provide a valuable insight when evaluating the vectorial capacity of ticks. Three tick species (Ixodes ovatus, I. persulcatus and Haemaphysalis flava were collected in Shizuoka Prefecture of Japan between 2008 and 2011. Each tick was dissected and the salivary glands removed. Bacterial communities in each salivary gland were characterized by 16S amplicon pyrosequencing using a 454 GS-Junior Next Generation Sequencer. The Ribosomal Database Project (RDP Classifier was used to classify sequence reads at the genus level. The composition of the microbial populations of each tick species were assessed by principal component analysis (PCA using the Metagenomics RAST (MG-RAST metagenomic analysis tool. Rickettsia-specific PCR was used for the characterization of rickettsial species. Almost full length of 16S rDNA was amplified in order to characterize unclassified bacterial sequences obtained in I. persulcatus female samples. The numbers of bacterial genera identified for the tick species were 71 (I. ovatus, 127 (I. persulcatus and 59 (H. flava. Eighteen bacterial genera were commonly detected in all tick species. The predominant bacterial genus observed in all tick species was Coxiella. Spiroplasma was detected in Ixodes, and not in H. flava. PCA revealed that microbial populations in tick salivary glands were different between tick species, indicating that host specificities may play an important role in determining the microbial complement. Four female I. persulcatus samples contained a high abundance of several sequences belonging to Alphaproteobacteria symbionts. This study revealed the microbial populations within the salivary glands of three species of

  14. Antibacterial, Anticancer and Neuroprotective Activities of Rare Actinobacteria from Mangrove Forest Soils.

    Science.gov (United States)

    Azman, Adzzie-Shazleen; Othman, Iekhsan; Fang, Chee-Mun; Chan, Kok-Gan; Goh, Bey-Hing; Lee, Learn-Han

    2017-06-01

    Mangrove is a complex ecosystem that contains diverse microbial communities, including rare actinobacteria with great potential to produce bioactive compounds. To date, bioactive compounds extracted from mangrove rare actinobacteria have demonstrated diverse biological activities. The discovery of three novel rare actinobacteria by polyphasic approach, namely Microbacterium mangrovi MUSC 115 T , Sinomonas humi MUSC 117 T and Monashia flava MUSC 78 T from mangrove soils at Tanjung Lumpur, Peninsular Malaysia have led to the screening on antibacterial, anticancer and neuroprotective activities. A total of ten different panels of bacteria such as Methicillin-resistant Staphylococcus aureus (MRSA) ATCC 43300, ATCC 70069, Pseudomonas aeruginosa NRBC 112582 and others were selected for antibacterial screening. Three different neuroprotective models (hypoxia, oxidative stress, dementia) were done using SHSY5Y neuronal cells while two human cancer cells lines, namely human colon cancer cell lines (HT-29) and human cervical carcinoma cell lines (Ca Ski) were utilized for anticancer activity. The result revealed that all extracts exhibited bacteriostatic effects on the bacteria tested. On the other hand, the neuroprotective studies demonstrated M. mangrovi MUSC 115 T extract exhibited significant neuroprotective properties in oxidative stress and dementia model while the extract of strain M. flava MUSC 78 T was able to protect the SHSY5Y neuronal cells in hypoxia model. Furthermore, the extracts of M. mangrovi MUSC 115 T and M. flava MUSC 78 T exhibited anticancer effect against Ca Ski cell line. The chemical analysis of the extracts through GC-MS revealed that the majority of the compounds present in all extracts are heterocyclic organic compound that could explain for the observed bioactivities. Therefore, the results obtained in this study suggested that rare actinobacteria discovered from mangrove environment could be potential sources of antibacterial, anticancer and

  15. New species and records of Perlidae (Plecoptera) from Espírito Santo State, Brazil.

    Science.gov (United States)

    Gonçalves, Maísa DE Carvalho; Novaes, Marcos Carneiro; Salles, Frederico Falcão

    2017-06-01

    Two new species of the perlid genus Anacroneuria, A. rotunda n. sp and A. pitii n. sp are described from Espírito Santo State, Brazil. Additionally, six species of Anacroneuria and four species of Kempnyia are reported for the first time from Espírito Santo State. Records are also provided for A. debilis, A. subcostalis, K. flava, K. gracilenta, and K. neotropica. An undetermined species of Macrogynoplax based on nymphs is also reported from Espírito Santo State.

  16. Lepidopterans and their parasitoids on okra plants in Riberão Preto (SP, Brazil Lepidópteros e seus parasitoides em cultura de quiabo em Ribeirão Preto, SP, Brasil

    Directory of Open Access Journals (Sweden)

    Rogéria Inês Rosa Lara

    2012-04-01

    Full Text Available The aim of this study was to identify the defoliating lepidopterans and their parasitoids occurring on okra plants in the district of Riberão Preto city (SP. Brazil. Caterpillars were collected by hand from an experimental field of okra, in March and April, 2009. They were placed individually on Petri dishes lined with wet filter paper, containing shredded okra leaves, and kept in a climactic chamber (25±1°C, 12:12h light/dark photoperiod, RH 70±10% until the emergence of lepidopterans and/or parasitoids. In all, 63 lepidopterans were obtained: three species of Noctuidae, Anomis flava (Fabricius, Spodoptera frugiperda (Smith and Pseudoplusia includens (Walker; one of Pieridae, Ascia monuste orseis (Godart, and an unidentified species of Tortricidae. One unidentified tachinid fly (Diptera and the Hymenoptera parasitoids Copidosoma floridanum (Ashmead (Encyrtidae and Euplectrus sp. (Eulophidae emerged from A. flava, while C. floridanum and an unidentified tachinid, from P. includens. This is the first report of an association between the herbivores S. frugiperda, P. includens and A. monuste orceis, the parasitoids C. floridanum and Euplectrus sp. on okra plants.Este estudo objetivou identificar lepidópteros desfolhadores e seus parasitoides em cultura de quiabo em Ribeirão Preto, SP, Brasil. As lagartas foram coletadas através de catação manual entre março e abril de 2009, individualizadas em placas de Petri forradas com papel filtro umedecido contendo pedaços de folhas de quiabo e mantidas sob condições controladas (25±1°C, 12 horas de fotofase, 70±10% de UR até a obtenção dos adultos de lepidópteros e/ou de seus parasitoides. Foram obtidos 63 adultos de lepidópteros: três espécies de Noctuidae, Anomis flava (Fabricius, Spodoptera frugiperda (Smith, Pseudoplusia includens (Walker, uma de Pieridae, Ascia monuste orseis (Godart e uma de Tortricidae não identificada. Uma espécie não identificada de taquinídeo (Diptera e os

  17. Salida de campo a Etang de Fournelet (Francia) el 1 de mayo de 1954

    OpenAIRE

    Valverde Gómez, José Antonio, 1926-2003

    2008-01-01

    Salida de campo a Etang de Fournelet, seguramente cerca a la reserva natural de La Camarga, en el delta del río Ródano (Provenza), el 1 de mayo de 1954, de la que se anotaron observaciones sobre las siguientes aves: Actitis hypoleucos (Andarríos chico, llamado Actynioides hypoleucus por el autor), Circus aeruginosus (Aguilucho lagunero occidental), Himantopus himantopus (Cigüeñuela común), Motacilla flava (Lavandera boyera), Saxicola rubetra (Tarabilla norteña), Sylvia conspicillata (Curruca ...

  18. Gipuzkoan hegazti habigile batzuen lehen aipamenak eta beste aipamen interesgarri batzuk

    Directory of Open Access Journals (Sweden)

    OLANO, M., VAZQUEZ, J., AIERBE, T.

    1998-01-01

    Full Text Available Como resultado del trabajo de campo realizado estos últimos años, se da cuenta por primera vez de la presencia como aves nidificantes en Gipuzkoa de Fulica atra, Policeps cristatus, Tachybaptus ruficollis, Riparia riparia, Falco subbuteo, Asio otus, Aquila chysaëtos, Circaetus Gallicus y Drycopus martius. Además, se recogen datos de unas cuantas especies muy poco conocidas en esta provincia : Accipiter gentilis, Hieraëtus pennatus, Milvus migrans, Bubo bubo, Motacilla flava, Monticola solitarius and Certthia familiaris.

  19. Sex Hormone Receptor Expression in the Human Vocal Fold Subunits.

    Science.gov (United States)

    Kirgezen, Tolga; Sunter, Ahmet Volkan; Yigit, Ozgur; Huq, Gulben Erdem

    2017-07-01

    The study aimed to evaluate the existence of sex hormone receptors in the subunits of vocal fold. This is a cadaver study. The androgen, estrogen, and progesterone receptors were examined in the epithelium (EP), superficial layer of the lamina propria (SLP), vocal ligament (VL), and macula flava (MF) of the vocal folds from 42 human cadavers (21 male, 21 female) by immunohistochemical methods. Their staining ratios were scored and statistically compared. The androgen receptor score was significantly higher for the MF than for the EP and SLP (P vocal fold, mostly in the MF and VLs. Copyright © 2017 The Voice Foundation. Published by Elsevier Inc. All rights reserved.

  20. Conserved domains and SINE diversity during animal evolution.

    Science.gov (United States)

    Luchetti, Andrea; Mantovani, Barbara

    2013-10-01

    Eukaryotic genomes harbour a number of mobile genetic elements (MGEs); moving from one genomic location to another, they are known to impact on the host genome. Short interspersed elements (SINEs) are well-represented, non-autonomous retroelements and they are likely the most diversified MGEs. In some instances, sequence domains conserved across unrelated SINEs have been identified; remarkably, one of these, called Nin, has been conserved since the Radiata-Bilateria splitting. Here we report on two new domains: Inv, derived from Nin, identified in insects and in deuterostomes, and Pln, restricted to polyneopteran insects. The identification of Inv and Pln sequences allowed us to retrieve new SINEs, two in insects and one in a hemichordate. The diverse structural combination of the different domains in different SINE families, during metazoan evolution, offers a clearer view of SINE diversity and their frequent de novo emergence through module exchange, possibly underlying the high evolutionary success of SINEs. © 2013 Elsevier Inc. All rights reserved.

  1. Details of the evolutionary history from invertebrates to vertebrates, as deduced from the sequences of 18S rDNA.

    Science.gov (United States)

    Wada, H; Satoh, N

    1994-01-01

    Almost the entire sequences of 18S rDNA were determined for two chaetognaths, five echinoderms, a hemichordate, and two urochordates (a larvacean and a salp). Phylogenetic comparisons of the sequences, together with those of other deuterostomes (an ascidian, a cephalochordate, and vertebrates) and protostomes (an arthropod and a mollusc), suggest the monophyly of the deuterostomes, with the exception of the chaetognaths. Chaetognaths may not be a group of deuterostomes. The deuterostome group closest to vertebrates was the group of cephalochordates. Ascidians, larvaceans, and salps seem to form a discrete group (urochordates), in which the early divergence of larvaceans is evident. These results support the hypothesis that chordates evolved from free-living ancestors. PMID:8127885

  2. Metabolite profiling of the carnivorous pitcher plants Darlingtonia and Sarracenia.

    Science.gov (United States)

    Hotti, Hannu; Gopalacharyulu, Peddinti; Seppänen-Laakso, Tuulikki; Rischer, Heiko

    2017-01-01

    Sarraceniaceae is a New World carnivorous plant family comprising three genera: Darlingtonia, Heliamphora, and Sarracenia. The plants occur in nutrient-poor environments and have developed insectivorous capability in order to supplement their nutrient uptake. Sarracenia flava contains the alkaloid coniine, otherwise only found in Conium maculatum, in which its biosynthesis has been studied, and several Aloe species. Its ecological role and biosynthetic origin in S. flava is speculative. The aim of the current research was to investigate the occurrence of coniine in Sarracenia and Darlingtonia and to identify common constituents of both genera, unique compounds for individual variants and floral scent chemicals. In this comprehensive metabolic profiling study, we looked for compound patterns that are associated with the taxonomy of Sarracenia species. In total, 57 different Sarracenia and D. californica accessions were used for metabolite content screening by gas chromatography-mass spectrometry. The resulting high-dimensional data were studied using a data mining approach. The two genera are characterized by a large number of metabolites and huge chemical diversity between different species. By applying feature selection for clustering and by integrating new biochemical data with existing phylogenetic data, we were able to demonstrate that the chemical composition of the species can be explained by their known classification. Although transcriptome analysis did not reveal a candidate gene for coniine biosynthesis, the use of a sensitive selected ion monitoring method enabled the detection of coniine in eight Sarracenia species, showing that it is more widespread in this genus than previously believed.

  3. Metabolite profiling of the carnivorous pitcher plants Darlingtonia and Sarracenia.

    Directory of Open Access Journals (Sweden)

    Hannu Hotti

    Full Text Available Sarraceniaceae is a New World carnivorous plant family comprising three genera: Darlingtonia, Heliamphora, and Sarracenia. The plants occur in nutrient-poor environments and have developed insectivorous capability in order to supplement their nutrient uptake. Sarracenia flava contains the alkaloid coniine, otherwise only found in Conium maculatum, in which its biosynthesis has been studied, and several Aloe species. Its ecological role and biosynthetic origin in S. flava is speculative. The aim of the current research was to investigate the occurrence of coniine in Sarracenia and Darlingtonia and to identify common constituents of both genera, unique compounds for individual variants and floral scent chemicals. In this comprehensive metabolic profiling study, we looked for compound patterns that are associated with the taxonomy of Sarracenia species. In total, 57 different Sarracenia and D. californica accessions were used for metabolite content screening by gas chromatography-mass spectrometry. The resulting high-dimensional data were studied using a data mining approach. The two genera are characterized by a large number of metabolites and huge chemical diversity between different species. By applying feature selection for clustering and by integrating new biochemical data with existing phylogenetic data, we were able to demonstrate that the chemical composition of the species can be explained by their known classification. Although transcriptome analysis did not reveal a candidate gene for coniine biosynthesis, the use of a sensitive selected ion monitoring method enabled the detection of coniine in eight Sarracenia species, showing that it is more widespread in this genus than previously believed.

  4. Response of wild and weedy broomrapes to synthetic strigolactone analogue GR24

    Directory of Open Access Journals (Sweden)

    Radoslava Matusova

    2014-12-01

    Full Text Available Parasitic plants of genera Orobanche and Phelipanche germinate after exposition to chemical signals exuded by roots of the host plants. The most studied germination stimulants belong to strigolactones (SLs, the newly discovered plant hormones which are stimulating hyphal branching of arbuscular mycorrhizal fungi and are involved in regulation of shoot and root architecture of plants. However, little is known about the effect of strigolactones on germination of non-weedy broomrapes. The objective of our study was to investigate the sensitivity of seeds of non-weedy broomrapes to synthetic analogue of SLs, GR24. The seeds of non-weedy broomrapes Orobanche alba, O. alsatica, O. caryophyllacea, O. elatior, O. flava, O. lutea, O. pallidiflora, O. reticulata, Phelipanche arenaria, P. purpurea and weedy species P. ramosa were collected in natural and cropland plant communities in Slovakia. Seeds of P. ramosa and P. purpurea were highly sensitive to GR24. On the other hand, effectivity of GR24 in inducing germination of several wild species, O. alba, O. caryophyllacea and P. arenaria was low, while the stimulant shown to be completely not effective on other non-weedy species O. alsatica, O. elatior, O. flava, O. lutea, O. pallidiflora, and O. reticulata. The results point out there are differences in the requirement for germination signals that possibly depend on the host.

  5. Pseudomonas syringae enhances herbivory by suppressing the reactive oxygen burst in Arabidopsis.

    Science.gov (United States)

    Groen, Simon C; Humphrey, Parris T; Chevasco, Daniela; Ausubel, Frederick M; Pierce, Naomi E; Whiteman, Noah K

    2016-01-01

    Plant-herbivore interactions have evolved in the presence of plant-colonizing microbes. These microbes can have important third-party effects on herbivore ecology, as exemplified by drosophilid flies that evolved from ancestors feeding on plant-associated microbes. Leaf-mining flies in the genus Scaptomyza, which is nested within the paraphyletic genus Drosophila, show strong associations with bacteria in the genus Pseudomonas, including Pseudomonas syringae. Adult females are capable of vectoring these bacteria between plants and larvae show a preference for feeding on P. syringae-infected leaves. Here we show that Scaptomyza flava larvae can also vector P. syringae to and from feeding sites, and that they not only feed more, but also develop faster on plants previously infected with P. syringae. Our genetic and physiological data show that P. syringae enhances S. flava feeding on infected plants at least in part by suppressing anti-herbivore defenses mediated by reactive oxygen species. Copyright © 2015 Elsevier Ltd. All rights reserved.

  6. Evidence for gill slits and a pharynx in Cambrian vetulicolians: implications for the early evolution of deuterostomes

    Directory of Open Access Journals (Sweden)

    Ou Qiang

    2012-10-01

    members of the stem-group deuterostomes; a group best known as the chordates (amphioxus, tunicates, vertebrates, but also including the ambulacrarians (echinoderms, hemichordates, and xenoturbellids. If the latter, first they demonstrate that these members of the stem group show few similarities to the descendant crown group representatives. Second, of the key innovations that underpinned deuterostome success, the earliest and arguably most seminal was the evolution of openings that define the pharyngeal gill slits of hemichordates (and some extinct echinoderms and chordates.

  7. Change in microflora of sewage sludge by gamma-ray irradiation

    International Nuclear Information System (INIS)

    Ito, Hitoshi; Watanabe, Hiroshi; Takehisa, Masaaki; Iizuka, Hiroshi.

    1983-01-01

    Total bacteria of activated dewatered sludge cake of Takasaki city which amounted to 2 x 10 9 per gram diminished rapidly with the radiation dose, but slowly after 0.5 Mrad, and 10 3 per gram survived even after 10 Mrad irradiation. However, coliforms which amounted to 8 x 10 7 per gram were inactivated below 0.5 Mrad irradiation. The predominant bacteria in non-irradiated sludge were Pseudomonas cepacia and it mainly survived up to 2 Mrad, but Bacillus were predominant at 0.5 to 0.7 Mrad irradiation. The main residual flora from 2 to 5 Mrad was composed of Pseudomonas soranacearum, P. cepacia and P. delafieldii, and the main residual flora in more than 5 Mrad irradiated sludge was P. flava. These typical strains of Pseudomonas in phosphate buffer were radiation sensitive, and their D 10 values were from 0.005 to 0.021 Mrad under aerobic irradiation conditions. (author)

  8. Tratamento de esgoto sanitário em sistemas alagados construídos cultivados com lírio-amarelo

    OpenAIRE

    Prata,Renata C. C.; Matos,Antonio T. de; Cecon,Paulo R.; Monaco,Paola A. V. Lo; Pimenta,Leonardo A.

    2013-01-01

    Neste artigo, avaliou-se a eficiência de quatro sistemas alagados construídos (SACs) no tratamento de esgoto sanitário após ser submetido a tratamento preliminar e, no caso de alguns SACs, a tratamento primário (tanque séptico). Os SACs foram cultivados com lírio-amarelo (Hemerocallis flava), tendo a brita #0 como meio suporte, e submetidos às taxas de carregamento orgânico (TCO) de esgoto sanitário, em termos de DBO (kg ha-1 d-1), de 44; 98; 230 e 395 kg ha-1 d-1 e tempos de detenção hidrául...

  9. Spondylolisthesis and Posterior Instability

    International Nuclear Information System (INIS)

    Niggemann, P.; Beyer, H.K.; Frey, H.; Grosskurth, D.; Simons, P.; Kuchta, J.

    2009-01-01

    We present the case of a patient with a spondylolisthesis of L5 on S1 due to spondylolysis at the level L5/S1. The vertebral slip was fixed and no anterior instability was found. Using functional magnetic resonance imaging (MRI) in an upright MRI scanner, posterior instability at the level of the spondylolytic defect of L5 was demonstrated. A structure, probably the hypertrophic ligament flava, arising from the spondylolytic defect was displaced toward the L5 nerve root, and a bilateral contact of the displaced structure with the L5 nerve root was shown in extension of the spine. To our knowledge, this is the first case described of posterior instability in patients with spondylolisthesis. The clinical implications of posterior instability are unknown; however, it is thought that this disorder is common and that it can only be diagnosed using upright MRI

  10. Spondylolisthesis and Posterior Instability

    Energy Technology Data Exchange (ETDEWEB)

    Niggemann, P.; Beyer, H.K.; Frey, H.; Grosskurth, D. (Privatpraxis fuer Upright MRT, Koeln (Germany)); Simons, P.; Kuchta, J. (Media Park Klinik, Koeln (Germany))

    2009-04-15

    We present the case of a patient with a spondylolisthesis of L5 on S1 due to spondylolysis at the level L5/S1. The vertebral slip was fixed and no anterior instability was found. Using functional magnetic resonance imaging (MRI) in an upright MRI scanner, posterior instability at the level of the spondylolytic defect of L5 was demonstrated. A structure, probably the hypertrophic ligament flava, arising from the spondylolytic defect was displaced toward the L5 nerve root, and a bilateral contact of the displaced structure with the L5 nerve root was shown in extension of the spine. To our knowledge, this is the first case described of posterior instability in patients with spondylolisthesis. The clinical implications of posterior instability are unknown; however, it is thought that this disorder is common and that it can only be diagnosed using upright MRI.

  11. Increasing the Effectiveness of the “Great Green Wall” as an Adaptation to the Effects of Climate Change and Desertification in the Sahel

    Directory of Open Access Journals (Sweden)

    David O'Connor

    2014-10-01

    Full Text Available The Great Green Wall (GGW has been advocated as a means of reducing desertification in the Sahel through the planting of a broad continuous band of trees from Senegal to Djibouti. Initially proposed in the 1980s, the plan has received renewed impetus in light of the potential of climate change to accelerate desertification, although the implementation has been lacking in all but two of 11 countries in the region. In this paper, we argue that the GGW needs modifying if it is to be effective, obtain the support of local communities and leverage international support. Specifically, we propose a shift from planting trees in the GGW to utilizing shrubs (e.g., Leptospermum scoparium, Boscia senegalensis, Grewia flava, Euclea undulata or Diospyros lycioides, which would have multiple benefits, including having a faster growth rate and proving the basis for silvo-pastoral livelihoods based on bee-keeping and honey production.

  12. Występowanie Equisetum telmateia Ehrh. w użytkach rolnych

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    Domink Wróbel

    2013-12-01

    Full Text Available Equisetum telmateia Ehrh. rather often occurs in agricultural lands communities. According to the literature and one's own original research, one constructs his list which contains 16 communities, associations and subassociations (Vicietum tetraspermae, Aphano-Matricarietum, Lathvro-Melandrietum noctiflori, Echinochloo-Setarietum, Galinsogo-Setarietum, Cirsietum rivularis, Cirsetum rivularis caricetosum hartmanii, Scirpetum sylvatici, community with Mentha longifolia, community ,with Equisetum telmateia, Arrhenatheretum medioeuroaeum, Arrhenatheretum mnedioeuropaeum brizetosum mediae, community with Cirsium oleraceuum, Lolio-Cynosuretum, Valeriano-Caricetum flavae, Carlino Dianthetum deltoidis. The occurrence of Giant horsetail in such differentiated communities points to its wide ecological scale and the ability to survive in different forms of anthropogenic pressure. The appearance of this species in agricultural land communities may be result of its previous existence on the land that started to be cultivated land or of the vegetative spreading of its rhizomes.

  13. The study of the antimicrobial activity of colloidal solutions of silver nanoparticles prepared using food stabilizers.

    Science.gov (United States)

    Balandin, G V; Suvorov, O A; Shaburova, L N; Podkopaev, D O; Frolova, Yu V; Ermolaeva, G A

    2015-06-01

    The bactericidal effect of colloidal solutions of silver nanoparticles based on food stabilizers, gum arabic and chitosan, against bacterial cultures of microorganisms in food production is described. The antibacterial activity of nanotechnology products containing different amounts of stabilizing additives when applied to solid pH-neutral substrates is studied. For its evaluation a method making it possible to take into account the capability of nanoparticles to diffuse in solid media was applied. Minimal inhibitory concentrations of nanoparticles used against Erwinia herbicola, Pseudomonas fluorescens, Bacillus subtilis, Sarcina flava were found. A suggestion was made concerning the influence of the spatial structure of bacteria on the antibacterial activity of colloidal solutions of silver nanoparticles. The data concerning the antibacterial activity and minimal inhibiting concentrations of nanoparticles may be used for development of products suppressing activity of microorganisms hazardous for food production.

  14. Survey on tick-borne pathogens in thoroughbred horses in the Hidaka district, Hokkaido, Japan.

    Science.gov (United States)

    Ybañez, Adrian Patalinghug; Sato, Fumio; Nambo, Yasuo; Fukui, Takashi; Masuzawa, Toshiyuki; Ohashi, Norio; Matsumoto, Kotaro; Kishimoto, Toshio; Inokuma, Hisashi

    2013-01-31

    A total of 87 Thoroughbred horses and 10 ixodid ticks from a ranch in Hidaka district, Hokkaido were tested for tick-borne diseases. Using the indirect fluorescent antibody (IFA) method, 3.4, 92.0 and 97.7% of the horses showed antibody titers of ≥ 80 against Anaplasma phagocytophilum, Rickettsia helvetica, and Borrelia garinii, respectively. This is the first report of infection with the 3 pathogens in horses in Japan. Using PCR, DNAs from the peripheral blood of all horses were found negative with any Anaplasma, Rickettsia and Borrelia spp., while those from Haemaphysalis megaspinosa ticks were found positive for Anaplasma sp. closely related to A. phagocytophilum in Japan, and A. bovis. B. japonica was also detected in an H. flava tick for the first time.

  15. Detection of Severe Fever with Thrombocytopenia Syndrome Virus from Wild Animals and Ixodidae Ticks in the Republic of Korea.

    Science.gov (United States)

    Oh, Sung-Suck; Chae, Jeong-Byoung; Kang, Jun-Gu; Kim, Heung-Chul; Chong, Sung-Tae; Shin, Jeong-Hwa; Hur, Moon-Suk; Suh, Jae-Hwa; Oh, Myoung-Don; Jeong, Soo-Myoung; Shin, Nam-Shik; Choi, Kyoung-Seong; Chae, Joon-Seok

    2016-06-01

    Severe fever with thrombocytopenia syndrome (SFTS) is caused by SFTS virus (SFTSV), a novel bunyavirus reported to be endemic to central-northeastern China, southern Japan, and the Republic of Korea (ROK). To investigate SFTSV infections, we collected serum samples and ticks from wild animals. Using serum samples and ticks, SFTSV-specific genes were amplified by one-step RT-PCR and nested PCR and sequenced. Indirect immunofluorescence assay (IFA) was performed to analyze virus-specific antibody levels in wild animals. Serum samples were collected from a total of 91 animals: 21 Korean water deer (KWD), 3 Siberian roe deer, 5 gorals, 7 raccoon dogs, 54 wild boars (WBs), and 1 carrion crow. The SFTSV infection rate in wild animals was 3.30% (3 of 91 animals: 1 KWD and 2 WBs). The seropositive rate was 6.59% (6 of 91 animals: 5 KWD and 1 WB). A total of 891 ticks (3 species) were collected from 65 wild animals (9 species). Of the attached tick species, Haemaphysalis longicornis (74.86%) was the most abundant, followed by Haemaphysalis flava (20.20%) and Ixodes nipponensis (4.94%). The average minimum infection rate (MIR) of SFTSV in ticks was 4.98%. The MIRs of H. longicornis, H. flava, and I. nipponensis were 4.51%, 2.22%, and 22.73%, respectively. The MIRs of larvae, nymphs, and adult ticks were 0.68%, 6.88%, and 5.53%, respectively. In addition, the MIRs of fed and unfed ticks were 4.67% and 4.96%, respectively. We detected a low SFTSV infection rate in wild animals, no differences in SFTSV infection rate with respect to bloodsucking in ticks, and SFTSV infection for all developmental stages of ticks. This is the first report describing the detection of SFTSV in wild animals in the ROK.

  16. Comparison of Ehrlichia muris strains isolated from wild mice and ticks and serologic survey of humans and animals with E. muris as antigen.

    Science.gov (United States)

    Kawahara, M; Ito, T; Suto, C; Shibata, S; Rikihisa, Y; Hata, K; Hirai, K

    1999-04-01

    In metropolitan Tokyo, the Ehrlichia muris seropositivity rate of 24 wild mice was 63% in Hinohara Village, but in the surrounding areas, it was 0 to 5%. This finding suggests that the reservoir of E. muris is focal. Among the 15 seropositive mice, ehrlichiae were isolated from 9 Apodemus speciosus mice and 1 A. argenteus mouse, respectively. Five ehrlichial isolates were obtained from 10 ticks (Haemaphysalis flava) collected in Asuke Town, Aichi Prefecture, where the E. muris type strain had been isolated. These new isolates were compared with the E. muris type strain. The mouse virulence and ultrastructure of the new isolates were similar to those of the type strain, and all of them were cross-reactive with each other, as well as with the type strain, by indirect immunofluorescent-antibody test. The levels of similarity of the base sequences of the 16S rRNA gene of one of the A. speciosus isolates and one of the tick isolates to that of the E. muris type strain were 99.79 and 99.93%, respectively. We suggest that all of these isolates are E. muris; that E. muris is not limited to Eothenomys kageus but infects other species of mice; and that E. muris is present at locations other than Aichi Prefecture. It appears that H. flava is a potential vector of E. muris. Twenty (1%) of 1803 humans from metropolitan Tokyo were found to be seropositive for E. muris antibodies. A serological survey revealed that exposure to E. muris or organisms antigenically cross-reactive to E. muris occurred among dogs, wild mice, monkeys, bears, deer, and wild boars in Gifu Prefecture, nearby prefectures, and Nagoya City, central Japan. However, human beings and Rattus norvegicus rats in this area were seronegative. These results indicate broader geographic distribution of and human and animal species exposure to E. muris or related Ehrlichia spp. in Japan.

  17. Factibilidad económica de la asociación maíz-pasto en el establecimiento de un sistema silvopastoril en el piedemonte llanero de Colombia¹

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    V Sánchez

    Full Text Available El objetivo de la investigación fue evaluar financieramente una alternativa para el establecimiento de un sistema silvopastoril de sombra (SSP-S con leguminosas arbóreas nativas, conjuntamente con la producción de ensilaje de maíz y la renovación de praderas degradadas. Para ello se plantaron árboles en surcos y entre estos se sembró maíz, que fue cosechado para ensilar. Se seleccionaron tres especies nativas adaptadas a las condiciones de acidez del suelo (4,6, y se utilizó un arreglo factorial en bloques al azar con cuatro tratamientos, constituidos por las tres especies arbóreas a evaluar y el testigo: T O: testigo, T1: Piptadenia flava (acacia flava, T2: Cassia moschata (cañafistol y T3: Mimosa trianae (yopo, con cinco repeticiones por tratamiento, para un total de 20 unidades experimentales. Posteriormente se volvió a sembrar maíz, pero asociado con pasto, y se cosechó el maíz para ensilar, con lo que se renovó la pradera y se obtuvieron ingresos por concepto de ensilaje. Estos ingresos por la venta del ensilaje amortizaron los costos de la fase de establecimiento y generaron ganancias que hicieron viable económicamente el proyecto durante dicha fase, al lograr una utilidad neta por hectárea de USD 714, un valor presente neto (VPN de USD 407 y una tasa interna de retorno (TIR de 31,63 %. En otro tipo de SSP el costo de establecimiento puede llegar a más de USD 2 500 por hectárea y el retorno de la inversión puede tardar más de cuatro años.

  18. Variability in larval gut pH regulation defines sensitivity to ocean acidification in six species of the Ambulacraria superphylum.

    Science.gov (United States)

    Hu, Marian; Tseng, Yung-Che; Su, Yi-Hsien; Lein, Etienne; Lee, Hae-Gyeong; Lee, Jay-Ron; Dupont, Sam; Stumpp, Meike

    2017-10-11

    The unusual rate and extent of environmental changes due to human activities may exceed the capacity of marine organisms to deal with this phenomenon. The identification of physiological systems that set the tolerance limits and their potential for phenotypic buffering in the most vulnerable ontogenetic stages become increasingly important to make large-scale projections. Here, we demonstrate that the differential sensitivity of non-calcifying Ambulacraria (echinoderms and hemichordates) larvae towards simulated ocean acidification is dictated by the physiology of their digestive systems. Gastric pH regulation upon experimental ocean acidification was compared in six species of the superphylum Ambulacraria. We observed a strong correlation between sensitivity to ocean acidification and the ability to regulate gut pH. Surprisingly, species with tightly regulated gastric pH were more sensitive to ocean acidification. This study provides evidence that strict maintenance of highly alkaline conditions in the larval gut of Ambulacraria early life stages may dictate their sensitivity to decreases in seawater pH. These findings highlight the importance of identifying and understanding pH regulatory systems in marine larval stages that may contribute to substantial energetic challenges under near-future ocean acidification scenarios. © 2017 The Author(s).

  19. Anti-inflammatory activity in selected Antarctic benthic organisms

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    Juan eMoles

    2014-07-01

    Full Text Available Antarctic benthos was prospected in search for anti-inflammatory activity in polar benthic invertebrates, in two different geographical areas: deep-bottoms of the Eastern Weddell Sea and shallow-waters of the South Shetland Islands. A total of 36 benthic algae and invertebrate species were selected to perform solubility tests in order to test them for anti-inflammatory activity. From these, ethanol extracts of ten species from five different phyla resulted suitable to be studied in cell macrophage cultures (RAW 264.7. Cytotoxicity (MTT method and production of inflammatory mediators (prostaglandin E2, leukotriene B4, interleukin-1 were determined at three extract concentrations (50, 125, 250 g/mL. Bioassays resulted in four different species showing anti-inflammatory activity corresponding to three sponges: Mycale (Oxymycale acerata, Isodictya erinacea, and I. toxophila; and one hemichordate: Cephalodiscus sp. These results show that Antarctic sessile invertebrates may have great value as a source of lead compounds with potential pharmaceutical applications.

  20. ANISEED 2017: extending the integrated ascidian database to the exploration and evolutionary comparison of genome-scale datasets.

    Science.gov (United States)

    Brozovic, Matija; Dantec, Christelle; Dardaillon, Justine; Dauga, Delphine; Faure, Emmanuel; Gineste, Mathieu; Louis, Alexandra; Naville, Magali; Nitta, Kazuhiro R; Piette, Jacques; Reeves, Wendy; Scornavacca, Céline; Simion, Paul; Vincentelli, Renaud; Bellec, Maelle; Aicha, Sameh Ben; Fagotto, Marie; Guéroult-Bellone, Marion; Haeussler, Maximilian; Jacox, Edwin; Lowe, Elijah K; Mendez, Mickael; Roberge, Alexis; Stolfi, Alberto; Yokomori, Rui; Brown, C Titus; Cambillau, Christian; Christiaen, Lionel; Delsuc, Frédéric; Douzery, Emmanuel; Dumollard, Rémi; Kusakabe, Takehiro; Nakai, Kenta; Nishida, Hiroki; Satou, Yutaka; Swalla, Billie; Veeman, Michael; Volff, Jean-Nicolas; Lemaire, Patrick

    2018-01-04

    ANISEED (www.aniseed.cnrs.fr) is the main model organism database for tunicates, the sister-group of vertebrates. This release gives access to annotated genomes, gene expression patterns, and anatomical descriptions for nine ascidian species. It provides increased integration with external molecular and taxonomy databases, better support for epigenomics datasets, in particular RNA-seq, ChIP-seq and SELEX-seq, and features novel interactive interfaces for existing and novel datatypes. In particular, the cross-species navigation and comparison is enhanced through a novel taxonomy section describing each represented species and through the implementation of interactive phylogenetic gene trees for 60% of tunicate genes. The gene expression section displays the results of RNA-seq experiments for the three major model species of solitary ascidians. Gene expression is controlled by the binding of transcription factors to cis-regulatory sequences. A high-resolution description of the DNA-binding specificity for 131 Ciona robusta (formerly C. intestinalis type A) transcription factors by SELEX-seq is provided and used to map candidate binding sites across the Ciona robusta and Phallusia mammillata genomes. Finally, use of a WashU Epigenome browser enhances genome navigation, while a Genomicus server was set up to explore microsynteny relationships within tunicates and with vertebrates, Amphioxus, echinoderms and hemichordates. © The Author(s) 2017. Published by Oxford University Press on behalf of Nucleic Acids Research.

  1. Phylogenetic Origins of Brain Organisers

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    Ellen Robertshaw

    2012-01-01

    Full Text Available The regionalisation of the nervous system begins early in embryogenesis, concomitant with the establishment of the anteroposterior (AP and dorsoventral (DV body axes. The molecular mechanisms that drive axis induction appear to be conserved throughout the animal kingdom and may be phylogenetically older than the emergence of bilateral symmetry. As a result of this process, groups of patterning genes that are equally well conserved are expressed at specific AP and DV coordinates of the embryo. In the emerging nervous system of vertebrate embryos, this initial pattern is refined by local signalling centres, secondary organisers, that regulate patterning, proliferation, and axonal pathfinding in adjacent neuroepithelium. The main secondary organisers for the AP neuraxis are the midbrain-hindbrain boundary, zona limitans intrathalamica, and anterior neural ridge and for the DV neuraxis the notochord, floor plate, and roof plate. A search for homologous secondary organisers in nonvertebrate lineages has led to controversy over their phylogenetic origins. Based on a recent study in hemichordates, it has been suggested that the AP secondary organisers evolved at the base of the deuterostome superphylum, earlier than previously thought. According to this view, the lack of signalling centres in some deuterostome lineages is likely to reflect a secondary loss due to adaptive processes. We propose that the relative evolutionary flexibility of secondary organisers has contributed to a broader morphological complexity of nervous systems in different clades.

  2. The shape of the human lumbar vertebral canal A forma do canal vertebral lombar humano

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    Edmundo Zarzur

    1996-09-01

    Full Text Available Literature on the anatomy of the human vertebral column characterizes the shape of the lumbar vertebral canal as triangular. The purpose of the present study was to determine the precise shape of the lumbar vertebral canal. Ten lumbar vertebral columns of adult male cadavers were dissected. Two transverse sections were performed in the third lumbar vertebra. One section was performed at the level of the lower border of the ligamenta flava, and the other section was performed at the level of the pedicles. The shape of the lumbar vertebral canal at the level of the pedicles tends to be oval or circular, whereas the shape of the lumbar vertebral canal at the level of the lower border of the ligamenta flava is triangular. Thus, the shape of the human lumbar vertebral canal is not exclusively triangular, as reported in the literature. It is related to the level of the transversal section performed on the lumbar vertebra. This finding should be taken into consideration among factors involved in the spread of solutions introduced into the epidural space.A literatura sobre a anatomia da coluna vertebral descreve como sendo triangular o formato do canal vertebral na região lombar. O objetivo deste estudo é determinar a real forma do canal da coluna vertebral lombar.Dez colunas vertebrais de cadáveres de homens adultos foram dissecadas. Dois cortes transversais foram executados na terceira vértebra lombar. Um corte foi feito no nível das bordas inferiores de dois ligamentos amarelos vizinhos e o outro corte foi transversal, no nível dos pedículos. A forma do canal vertebral variou: no nível dos pedículos ela tende a ser oval ou circular e junto às bordas inferiores dos ligamentos amarelos passa a ser triangular. Portanto, a forma do canal vertebral lombar não é somente triangular; ela depende do nível em que se faz o corte transversal da vértebra. Estes achados devem ser levados em consideração entre os fatores envolvidos na difusão das

  3. Potencial de uso das espécies arbóreas de uma floresta secundária, na Zona Bragantina, Pará, Brasil Potential of use of the tree species in a secondary forest, of the Bragantina zone, Pará, Brazil

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    Fabrízia de Oliveira Alvino

    2005-12-01

    Full Text Available Este estudo teve como objetivo avaliar o potencial de uso das espécies arbóreas de uma floresta secundária com aproximadamente 30 anos de idade, abandonada após sucessivos ciclos de agricultura itinerante. A área de estudo está localizada em propriedade de agricultura familiar na Zona Bragantina, PA. A área inventariada corresponde a 1,5 ha, onde foram medidos todos os espécimes arbóreos com DAP ³ 5 cm. Verificou-se a ocorrência de 103 espécies, que totalizaram 1961 indivíduos/ha e área basal de 17,7 m²/ha. As espécies com maior número de indivíduos foram: Sacoglottis amazonica Mart., Ormosia flava (Ducke Rudd, Eschweilera coriacea (DC. S.A. Mori e Croton matourensis Aubl.. As categorias de uso que apresentam maior número de espécies foram: Construções rurais (33%, seguida das espécies madeireiras de alto valor comercial (30%, madeireiras de baixo valor comercial e as utilizadas como lenha (9% cada.The aim of this paper was to determine the economic potential of a secondary forest with about 30 years of age that was left to regrowth after successive cycles of swidden agriculture. The study area is located in a family farm in the Bragantina Zone, PA. The inventoried area was 1.5 ha, where all the tree specimens with DBH ³ 5 cm were measured. A total of 103 species were identified, corresponding to 1961 individuals/ha and 17.7 m²/ha basal area, the species with most number of individuals being Sacoglottis amazonica Mart., Ormosia flava (Ducke Rudd, Eschweilera coriacea (DC. S.A. Mori and Croton matourensis Aubl.. The categories with highest number of species were rural construction (33%, followed by high value commercial timber species (30%, low value commercial and firewood (9% each.

  4. Molecular detection of Rickettsia species in ticks collected from the southwestern provinces of the Republic of Korea.

    Science.gov (United States)

    Noh, Yoontae; Lee, Yeong Seon; Kim, Heung-Chul; Chong, Sung-Tae; Klein, Terry A; Jiang, Ju; Richards, Allen L; Lee, Hae Kyeong; Kim, Su Yeon

    2017-01-10

    Rickettsiae constitute a group of arthropod-borne, Gram-negative, obligate intracellular bacteria that are the causative agents of diseases ranging from mild to life threatening that impact on medical and veterinary health worldwide. A total of 6,484 ticks were collected by tick drag from June-October 2013 in the southwestern provinces of the Republic of Korea (ROK) (Jeollanam, n = 3,995; Jeollabuk, n = 680; Chungcheongnam, n = 1,478; and Chungcheongbuk, n = 331). Ticks were sorted into 311 pools according to species, collection site, and stage of development. DNA preparations of tick pools were assayed for rickettsiae by 17 kDa antigen gene and ompA nested PCR (nPCR) assays and the resulting amplicons sequenced to determine the identity and prevalence of spotted fever group rickettsiae (SFGR). Haemaphysalis longicornis (4,471; 52 adults, 123 nymphs and 4,296 larvae) were the most commonly collected ticks, followed by Haemaphysalis flava (1,582; 28 adults, 263 nymphs and 1,291 larvae), and Ixodes nipponensis (431; 25 adults, 5 nymphs and 401 larvae). The minimum field infection rate/100 ticks (assuming 1 positive tick/pool) was 0.93% for the 17 kDa antigen gene and 0.82% for the ompA nPCR assays. The partial 17 kDa antigen and ompA gene sequences from positive pools of H. longicornis were similar to: Rickettsia sp. HI550 (99.4-100%), Rickettsia sp. FUJ98 (99.3-100%), Rickettsia sp. HIR/D91 (99.3-100%), and R. japonica (99.7%). One sequence of the partial 17 kDa antigen gene for H. flava was similar to Rickettsia sp. 17kd-005 (99.7%), while seven sequences of the 17 kDa antigen gene obtained from I. nipponensis ticks were similar to R. monacensis IrR/Munich (98.7-100%) and Rickettsia sp. IRS3 (98.9%). SFG rickettsiae were detected in three species of ixodid ticks collected in the southwestern provinces of the ROK during 2013. A number of rickettsiae have been recently reported from ticks in Korea, some of which were identified as medically

  5. An anterior signaling center patterns and sizes the anterior neuroectoderm of the sea urchin embryo.

    Science.gov (United States)

    Range, Ryan C; Wei, Zheng

    2016-05-01

    Anterior signaling centers help specify and pattern the early anterior neuroectoderm (ANE) in many deuterostomes. In sea urchin the ANE is restricted to the anterior of the late blastula stage embryo, where it forms a simple neural territory comprising several types of neurons as well as the apical tuft. Here, we show that during early development, the sea urchin ANE territory separates into inner and outer regulatory domains that express the cardinal ANE transcriptional regulators FoxQ2 and Six3, respectively. FoxQ2 drives this patterning process, which is required to eliminate six3 expression from the inner domain and activate the expression of Dkk3 and sFRP1/5, two secreted Wnt modulators. Dkk3 and low expression levels of sFRP1/5 act additively to potentiate the Wnt/JNK signaling pathway governing the positioning of the ANE territory around the anterior pole, whereas high expression levels of sFRP1/5 antagonize Wnt/JNK signaling. sFRP1/5 and Dkk3 levels are rigidly maintained via autorepressive and cross-repressive interactions with Wnt signaling components and additional ANE transcription factors. Together, these data support a model in which FoxQ2 initiates an anterior patterning center that implements correct size and positions of ANE structures. Comparisons of functional and expression studies in sea urchin, hemichordate and chordate embryos reveal striking similarities among deuterostome ANE regulatory networks and the molecular mechanism that positions and defines ANE borders. These data strongly support the idea that the sea urchin embryo uses an ancient anterior patterning system that was present in the common ambulacrarian/chordate ancestor. © 2016. Published by The Company of Biologists Ltd.

  6. Identification of a transformer homolog in the acorn worm, Saccoglossus kowalevskii, and analysis of its activity in insect cells.

    Science.gov (United States)

    Suzuki, Masataka G; Tochigi, Mayuko; Sakaguchi, Honami; Aoki, Fugaku; Miyamoto, Norio

    2015-06-01

    The transformer (tra) gene is an intermediate component of the sex determination hierarchy in many insect species. The homolog of tra is also found in two branchiopod crustacean species but is not known outside arthropods. We have isolated a tra homolog in the acorn worm, Saccoglossus kowalevskii, which is a hemichordate belonging to the deuterostome superphylum. The full-length complementary DNA (cDNA) of the S. kowalevskii tra homolog (Sktra) has a 3786-bp open reading frame that encodes a 1261-amino acid sequence including a TRA-CAM domain and an arginine/serine (RS)-rich domain, both of which are characteristic of TRA orthologs. Reverse transcription PCR (RT-PCR) analyses demonstrated that Sktra showed no differences in expression patterns between testes and ovaries, but its expression level was approximately 7.5-fold higher in the testes than in the ovaries. TRA, together with the protein product of the transformer-2 (tra-2) gene, assembles on doublesex (dsx) pre-messenger RNA (mRNA) via the cis-regulatory element, enhancing female-specific splicing of dsx in Drosophila. To understand functional conservation of the SkTRA protein as a dsx-splicing activator, we investigated whether SkTRA is capable of inducing female-specific splicing of the Drosophila dsx. Ectopic expression of Sktra cDNA in insect cultured cells did not induce the female-specific splicing of dsx. On the other hand, forced expression of Sktra-2 (a tra-2 homolog of S. kowalevskii) was able to induce the female-specific dsx splicing. These results demonstrate that the function as a dsx-splicing activator is not conserved in SkTRA even though SkTRA-2 is capable of functionally replacing the Drosophila TRA-2. We have also found a tra homolog in an echinoderm genome. This study provides the first evidence that that tra is conserved not only in arthropods but also in basal species of deuterostoms.

  7. On the genus Tylorida Simon, 1894 with the first record of the genus Atelidea Simon, 1895 from India (Araneae: Tetragnathidae, Leucauginae).

    Science.gov (United States)

    Sankaran, Pradeep M; Malamel, Jobi J; Joseph, Mathew M; Sebastian, Pothalil A

    2017-11-23

    The tetragnathid spider genus Tylorida Simon, 1894 is reviewed in India. The relationship of Tylorida with Orsinome Thorell, 1890 is discussed and illustrated. The taxonomic significance of male chelicerae of Tylorida spp. is discussed and an identification key based on the features of male chelicerae to separate Indian Tylorida spp. is provided. A new species, Tylorida flava sp. nov. is described and illustrated. Two new transfers and four new synonyms are proposed: Orsinome marmorea Pocock, 1901 and Tylorida culta (O. Pickard-Cambridge, 1869) are transferred to Tylorida and Mesida Kulczyn'ski, 1911 respectively, Tylorida cylindrata (Wang, 1991) and Tylorida sataraensis Kulkarni, 2014 are synonymised with Tylorida marmorea (Pocock, 1901) comb. nov., Tylorida nicobarensis (Tikader, 1977) is synonymised with Tylorida striata (Thorell, 1877) and Leucauge pondae Tikader, 1970 is synonymised with Tylorida ventralis (Thorell, 1877). The biology, natural history and intraspecific variations of T. marmorea comb. nov. are noted. The occurrence of intraspecific variations and colour polymorphism in T. ventralis is discussed and two colour morphs (Silver and Yellow morphs) and three varieties (varieties I, II & III) for the species are recognised. Additionally, the genus Atelidea Simon, 1895 is recorded for the first time from India and provided the description and illustration of Atelidea nona sp. nov.. The current distribution of Atelidea is mapped.

  8. Investigation of In vitro Mineral forming bacterial isolates from supragingival calculus.

    Science.gov (United States)

    Baris, O; Demir, T; Gulluce, M

    2017-12-01

    Although it is known that bacterial mechanisms are involved in dental calculus formation, which is a predisposing factor in periodontal diseases, there have been few studies of such associations, and therefore, information available is limited. The purpose of this study was to isolate and identify aerobic bacteria responsible for direct calcification from supragingival calculus samples. The study was conducted using supragingival calculus samples from patients with periodontal disease, which was required as part of conventional treatment. Isolations were performed by sampling the supragingival calculus with buffer and inoculating the samples on media on which crystallization could be observed. The 16S recombinant DNA of the obtained pure cultures was then amplified and sequenced. A few bacterial species that have not previously been associated with mineralization or identified on bacterial plaque or calculus were detected. The bacteria that caused mineralization an aerobic environment are identified as Neisseria flava, Aggregatibacter segnis, Streptococcus tigurinus, and Morococcus cerebrosus. These findings proved that bacteria potentially play a role in the etiopathology of supragingival calculus. The association between the effects of the identified bacteria on periodontal diseases and calculus formation requires further studies.

  9. Cervical spinal cord injuries in patients with cervical spondylosis.

    Science.gov (United States)

    Regenbogen, V S; Rogers, L F; Atlas, S W; Kim, K S

    1986-02-01

    Eighty-eight patients over age 40 with traumatic cervical spinal cord injuries were clinically and radiographically evaluated, and comparison was made with 35 spinal cord injury patients under age 36. While most older patients sustained obvious bony and/or ligamentous damage commensurate with their neurologic findings, 25 (28%) of the 88 patients had no demonstrable bony abnormalities and 17 (20%) of the 88 patients had only minimal evidence of bony injury. Of particular interest are the patients with severe cord injuries, yet no bony abnormalities, who seem to form a distinct subgroup of the cervical spinal cord injury patient on the basis of radiographic and clinical features. Of these 25 patients, 24 (96%) had severe cervical spondylosis. Fourteen (56%) of the 25 patients were injured in falls, five (36%) of these 14 being of a seemingly trivial nature. Of the 42 patients with minimal or no demonstrable bony abnormalities, 33 (79%) were evaluated with plain tomography and no occult fractures or other significant pathology was demonstrated. Pantopaque myelography in 27 (64%) of the 42 cases revealed no extruded disk or other surgical lesion in any patient. In large measure, these injuries can be attributed to cervical spondylosis, which narrows the canal and makes the cord more susceptible to compression by the bulging ligamenta flava during hyperextension.

  10. EKSPLORASI HIJUAN PAKAN BABI DAN CARA PENGGUNAANNYA PADA PETERNAKAN BABI TRADISIONAL DI PROVINSI BALI

    Directory of Open Access Journals (Sweden)

    K. Budaarsa

    2015-06-01

    Full Text Available Penelitian ini bertujuan untuk mengetahui jenis-jenis hijauan yang diberikan sebagai pakan ternak babi dan cara penggunaannya di propvinsi Bali. Penelitian dilakukan dengan metode survei di seluruh kabupaten dan kota di Bali. Pengambilan sampel dilakukan dengan teknik stratified random sampling, dengan pengelompokan atas dataran rendah dan dataran tinggi di masing-masing kabupaten dan kota. Pada masing-masing kelompok di ambil 2 orang peternak babi tradisional, sehingga ada 4 peternak yang diwawancarai di masing-masing kabupaten dan kota atau 32 peternak di seluruh Bali. Hasil survei menunjukkan bahwa ada perbedaan hijauan yang diberikan oleh peternak di dataran rendah dan dataran tinggi. Jenis hijauan yang diberikan di dataran rendah antara lain: batang pisang (Musa paradisiaceae, kangkung (Ipomaea aquatica, biah-biah (Limnocharis flava, dan eceng gondok (Eichornia crassipes. Sedamgkan di dataran tinggi antara lain: batang pisang (Musa paradisiaceae, ketela rambat (Ipomaea batatas, daunt alas (Colocasia esculenta daun lamtoro (Leucaena leucocephala dan dag-dagse (Pisonia alba. Batang pisang dominan (95 % diberikan di dataran rendah maupun di dataran tinggi. Pemberian hijauan ada dengan cara direbus ada yang diberikan dalam bentuk segar. Kesimpulan dari penelitian ini adalah terdapat keragaman jenis hijauan pakan babi dan cara pemberiannya antara di dataran rendah dengan dataran tinggi di Bali. Batang pisang merupakan hijauan yang paling banyak digunakan untuk pakan babi pada peternakan babi tradisional, baik pada dataran rendah maupun dataran tinggi.

  11. A demographic approach to study effects of climate change in desert plants

    Science.gov (United States)

    Salguero-Gómez, Roberto; Siewert, Wolfgang; Casper, Brenda B.; Tielbörger, Katja

    2012-01-01

    Desert species respond strongly to infrequent, intense pulses of precipitation. Consequently, indigenous flora has developed a rich repertoire of life-history strategies to deal with fluctuations in resource availability. Examinations of how future climate change will affect the biota often forecast negative impacts, but these—usually correlative—approaches overlook precipitation variation because they are based on averages. Here, we provide an overview of how variable precipitation affects perennial and annual desert plants, and then implement an innovative, mechanistic approach to examine the effects of precipitation on populations of two desert plant species. This approach couples robust climatic projections, including variable precipitation, with stochastic, stage-structured models constructed from long-term demographic datasets of the short-lived Cryptantha flava in the Colorado Plateau Desert (USA) and the annual Carrichtera annua in the Negev Desert (Israel). Our results highlight these populations' potential to buffer future stochastic precipitation. Population growth rates in both species increased under future conditions: wetter, longer growing seasons for Cryptantha and drier years for Carrichtera. We determined that such changes are primarily due to survival and size changes for Cryptantha and the role of seed bank for Carrichtera. Our work suggests that desert plants, and thus the resources they provide, might be more resilient to climate change than previously thought. PMID:23045708

  12. Single-cell sequencing unveils the lifestyle and CRISPR-based population history of Hydrotalea sp. in acid mine drainage.

    Science.gov (United States)

    Medeiros, J D; Leite, L R; Pylro, V S; Oliveira, F S; Almeida, V M; Fernandes, G R; Salim, A C M; Araújo, F M G; Volpini, A C; Oliveira, G; Cuadros-Orellana, S

    2017-10-01

    Acid mine drainage (AMD) is characterized by an acid and metal-rich run-off that originates from mining systems. Despite having been studied for many decades, much remains unknown about the microbial community dynamics in AMD sites, especially during their early development, when the acidity is moderate. Here, we describe draft genome assemblies from single cells retrieved from an early-stage AMD sample. These cells belong to the genus Hydrotalea and are closely related to Hydrotalea flava. The phylogeny and average nucleotide identity analysis suggest that all single amplified genomes (SAGs) form two clades that may represent different strains. These cells have the genomic potential for denitrification, copper and other metal resistance. Two coexisting CRISPR-Cas loci were recovered across SAGs, and we observed heterogeneity in the population with regard to the spacer sequences, together with the loss of trailer-end spacers. Our results suggest that the genomes of Hydrotalea sp. strains studied here are adjusting to a quickly changing selective pressure at the microhabitat scale, and an important form of this selective pressure is infection by foreign DNA. © 2017 John Wiley & Sons Ltd.

  13. A related study of the CT imaging of the chronic low back pain

    International Nuclear Information System (INIS)

    Zhan Zhigang

    2006-01-01

    Objective: To study the clinical application of the CT imaging in patients with chronic low back pain. Methods: CT images were retrospectively analyzed in 164 cases of chronic low back pain. All the cases were diagnosed with CT imaging, or confirmed by operation, or proved in follow-up. Results: Intervertebral disc bulging in different level as a result from the degeneration of the disc was found in 148 cases (90.24%) out of 164. Disc protrusion was presented in 129 cases(78.66%). Bony narrowing of the spinal canal was revealed in 33 cases(20.12%). Degenerative lumbar spinal instability yielded in 14 cases (8.5%). Ossification or calcification of posterior longitudinal ligament was seen in 26 cases (15.85%). Thickening of ligamenta flava was shown in the 22 eases (13.41%). Conclusion: Chronic low back pain is mainly caused by the disorders of the intervertebral disc, which has typical CT findings: narrowed spinal canal or lateral recess. Ossification or calcification of posterior longitudinal ligament also plays a role in low back pain. An accurate interpretation of the CT images is essential for the clinical management. (authors)

  14. Mitigation of unionid mortality caused by zebra mussel infestation: cleaning of unionids

    Science.gov (United States)

    Schloesser, Don W.

    1996-01-01

    Exotic zebra mussels Dreissena polymorpha have infested and caused mortality of native unionids in the Great Lakes since 1986; no other such parasitism of native unionids occurs in North America. Survival of unionids threatened by zebra mussel infestation was tested by suspending uncleaned and cleaned unionids in nearshore waters of western Lake Erie. Survival was determined, and newly settled zebra mussels were removed from clean unionids at eight intervals that ranged from 21 d to 77 d between 5 July 1990 and 3 July 1991. After 1 year, survival rates of uncleaned and cleaned unionids were 0% and 42%, respectively. Of the 10 species examined, only indivduals from 3 species (Amblema plicata plicata, Fusconaia flava, and Quadrula quadrula) survived 1 year. These species have relatively thick shells, which may have contributed to their survival. Removal of newly settled zebra mussels may be important to unionid survival because 98% of the zebra mussels removed after the initial cleaning were small mussels (zebra mussels cause mortality of unionids, but the removal of zebra mussels from unionids is the only method known that successfully reduces unionid mortality in waters colonized by zebra mussels.

  15. A Naturally Occurring Antioxidant Complex from Unripe Grapes: The Case of Sangiovese (v. Vitis vinifera

    Directory of Open Access Journals (Sweden)

    Giovanna Fia

    2018-02-01

    Full Text Available The wine industry is well known for its production of a large amount of wastes and by-products. Among them, unripe grapes from thinning operations are an undervalued by-product. Grapes are an interesting source of natural antioxidants such as flavonoids, non-flavonoids and stilbenes. A potential strategy to exploit unripe grapes was investigated in this study. Juice from unripe grapes, v. Sangiovese, was obtained by an innovative technique of solid-liquid extraction without the use of solvents. The juice was dried by a spray-drying technique with the addition of arabic gum as support to obtain powder; juice and powder were characterized for antioxidant activity, phenolic concentration and profile. Phenolic acids, flavonols, flava-3-ols, procyanidins and resveratrol were detected in the juice and powder. The powder was used as anti-browning additive in white wine to test the potential re-use of the unripe grapes in the wine industry. The results indicated that the antioxidant complex from unripe grapes contributed to increasing the anti-browning capacity of white wine. Other applications, such as food and nutraceutical products development, can be considered for the antioxidant complex extracted from unripe grapes. In conclusion, the method proposed in this study may contribute to the exploitation of unripe grapes as a by-product of the winemaking process.

  16. The genus Macroteleia Westwood (Hymenoptera, Platygastridae s. l., Scelioninae from China

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    Chen Huayan

    2013-05-01

    Full Text Available The genus Macroteleia Westwood (Hymenoptera: Platygastridae s. l., Scelioninae from China is revised. Seventeen species are recognized based on 502 specimens, all of which are new records for China. Seven new species are described: M. carinigena sp. n. (China, M. flava sp. n. (China, M. gracilis sp. n. (China, M. salebrosa sp. n. (China, M. semicircula sp. n. (China, M. spinitibia sp. n. (China and M. striatipleuron sp. n. (China. Ten species are redescribed: M. boriviliensis Saraswat (China, India, Thailand, M. crawfordi Kiefer, stat. n. (China, Philippines, Thailand, Vietnam, M. dolichopa Sharma (China, India, Vietnam, M. emarginata Dodd (China, Malaysia, M. indica Saraswat & Sharma (China, India, Vietnam, M. lamba Saraswat & Sharma (China, India, Thailand, Vietnam, M. livingstoni Saraswat (China, India, M. peliades Kozlov & Lê (China, Vietnam, M. rufa Szelényi (China, Egypt, Georgia, Russia, Thailand, Ukraine and M. striativentris Crawford (China, Philippines, Thailand, Vietnam. The following five new synonyms are proposed: M. crates Kozlov & Lê syn. n. and M. demades Kozlov & Lê syn. n. of M. crawfordi Kieffer; M. cebes Kozlov & Lê syn. n. and M. dones Kozlov & Lê syn. n. of M. indica Saraswat & Sharma; M. dores Kozlov & Lê syn. n. of M. lamba Saraswat & Sharma. A key to the Chinese species of the genus is provided.

  17. Magnetic Resonance Imaging in degenerative disease of the lumbar spine: Fat Saturation technique and contrast medium.

    Science.gov (United States)

    D'Aprile, Paola; Nasuto, Michelangelo; Tarantino, Alfredo; Cornacchia, Samantha; Guglielmi, Giuseppe; Jinkins, J Randy

    2018-01-19

    To examine both anterior and posterior elements of the lumbar spine in patients with low back pain using MRI T2-weighted sequences with Fat Saturation (FS) and contrast enhanced T1-weighted sequences with FS. Two thousand eight hundred and twenty (2820) patients (1628 male, 1192 female, mean age 54) presenting low back pain underwent MRI standard examination (Sagittal T1w TSE and T2w TSE, axial T1 SE) with the addition of sagittal and axial T2w Fat Sat (FS) sequences. Among all the patients, 987 (35%) have been studied adding Contrast Enhanced (CE) T1w FS sequences after administration of contrast medium. Among 987 patients studied with contrast medium, we found: active-inflammatory intervertebral osteochondrosis in 646 (65%) patients; degenerative-inflammatory changes in facet joints (facet joint effusion, synovitis, synovial cysts) in 462 (47%); spondylolysis in 69 (7%); degenerative-inflammatory changes of the flava, interspinous and supraspinous ligaments in 245 (25%); inflammatory changes of posterior perispinal muscles in 84 (8%) patients. In patients with suspected no-disc-related low back pain, the implementation of T2w FS and CE T1w FS sequences to the standard MR protocol could allow a better identification of degenerative-inflammatory changes more likely associated to the pain.

  18. Influence of gamma ray treatment on in vitro regenerated plants of Atropa Belladonna L

    International Nuclear Information System (INIS)

    Toth, E.; Onisei, T.; Amariei, D.

    1994-01-01

    Regenerated plants were obtained through callus organogenesis after gamma ray treatment with 1 to 9 Krad doses. Vigorous shoots were regenerated on MS (1962) medium supplemented with 2 mg/l 6-benzylaminopurine. Shoot growth was inhibited with increasing irradiation doses. At 2 Krad dose root Primordia were observed after 18 days while 32 days were necessary to produce roots at 7-9 Krad. As compared to the control, the survival percent during acclimatization was 80 to 85% at 2-3 Krad, 65-70% at 4-6 Krad and 60-62% at 7-9 Krad. Approximately 330 plants were transferred to field conditions. Morphological and biochemical parameters were measured and the data were statistically processed. Plant height was negatively influenced by higher doses of irradiation. A chlorophyll deficient plant arose from the 6 Krad treatment which showed a different pattern of isoperoxidase and isoesterase as compared to the control. A yellow-flower mutant was obtained from the 3 Krad treatment and is assumed to be Atropa belladonna var. Flava Pater. (author)

  19. Acute traumatic central cord syndrome: MRI-pathological correlations

    International Nuclear Information System (INIS)

    Quencer, R.M.; Bunge, R.P.; Egnor, M.; Green, B.A.; Puckett, W.; Naidich, T.P.; Post, M.J.D.; Norenberg, M.

    1992-01-01

    The acute traumatic central cord syndrome (ATCCS) is commonly stated to result from an injury which affects primarily the center of the spinal cord and is frequently hemorrhagic. To test the validity of this widely disseminated hypothesis, the magnetic resonance images [MRI] of 11 consecutive cases of ATCCS caused by closed injury to the spine were analyzed and correlated with the gross pathological and histological features of 3 cervical spinal cords obtained at post mortem from patients with ATCCS, including 2 of patients studied by MRI. In this study, the MRI and pathological observations indicate that ATCCS is predominantly a white matter injury and that intramedullary hemorrhage is not a necessary feature of the syndrome; indeed, it is probably an uncommon event in ATCCS. We suggest that the most common mechanism of injury in ATCCS may be direct compression of the cervical spinal cord by buckling of the ligamenta flava into an already narrowed cervical spinal canal; this would explain the predominance of axonal injury in the white matter of the lateral columns. (orig./GDG)

  20. The in-vitro antimicrobial activities of some medicinal plants from Cameroon.

    Science.gov (United States)

    Gangoué-Piéboji, J; Pegnyemb, D E; Niyitegeka, D; Nsangou, A; Eze, N; Minyem, C; Mbing, J Ngo; Ngassam, P; Tih, R Ghogomu; Sodengam, B L; Bodo, B

    2006-04-01

    The antimicrobial activities of 10 plant species (Voacanga africana, Crepis cameroonica, Plagiostyles africana, Crotalaria retusa, Mammea africana, Lophira lanceolata, Ochna afzelii, Ouratea elongata, Ou. flava and Ou. sulcata), each of which is currently used in the traditional medicine of Cameroon, were investigated in vitro. The activities of a methanol extract of each plant were tested, in disc-diffusion assays, against 37 reference or laboratory strains of seven species of microorganism (Staphylococcus aureus, S. epidermidis, Enterococcus hirae, Escherichia coli, Klebsiella pneumoniae, Pseudomonas aeruginosa and Candida albicans). The minimal inhibitory concentrations of each extract were then estimated, against each of the more susceptible microorganisms (i.e. those giving an inhibition zone measuring at least 9 mm in diameter in the disc-diffusion assays), by agar dilution. Although, in the disc-diffusion assays, each of the 10 methanol extracts investigated displayed some degree of antimicrobial activity against at least one species of microorganism, no activity against the Gram-negative bacteria (Es. coli, K. pneumoniae and Ps. aeruginosa) was observed. The extract with the greatest antimicrobial activity was that of Pl. africana (Euphorbiaceae).

  1. Acute traumatic central cord syndrome: MRI-pathological correlations

    Energy Technology Data Exchange (ETDEWEB)

    Quencer, R.M. (Dept. of Radiology, Univ. of Miami MRI Center, FL (United States) Miami Project to Cure Paralysis, FL (United States)); Bunge, R.P.; Egnor, M.; Green, B.A. (Miami Project to Cure Paralysis, FL (United States) Dept. of Neurological Surgery, Univ. of Miami School of Medicine, FL (United States)); Puckett, W. (Miami Project to Cure Paralysis, FL (United States)); Naidich, T.P. (Dept. of Radiology, Univ. of Miami MRI Center, FL (United States) Miami Project to Cure Paralysis, FL (United States) Baptist Hospital of Greater Miami, FL (United States)); Post, M.J.D. (Dept. of Radiology, Univ. of Miami MRI Center, FL (United States)); Norenberg, M. (Dept. of Neuropathology, Univ. of Miami School of Medicine, FL (United States))

    1992-04-01

    The acute traumatic central cord syndrome (ATCCS) is commonly stated to result from an injury which affects primarily the center of the spinal cord and is frequently hemorrhagic. To test the validity of this widely disseminated hypothesis, the magnetic resonance images [MRI] of 11 consecutive cases of ATCCS caused by closed injury to the spine were analyzed and correlated with the gross pathological and histological features of 3 cervical spinal cords obtained at post mortem from patients with ATCCS, including 2 of patients studied by MRI. In this study, the MRI and pathological observations indicate that ATCCS is predominantly a white matter injury and that intramedullary hemorrhage is not a necessary feature of the syndrome; indeed, it is probably an uncommon event in ATCCS. We suggest that the most common mechanism of injury in ATCCS may be direct compression of the cervical spinal cord by buckling of the ligamenta flava into an already narrowed cervical spinal canal; this would explain the predominance of axonal injury in the white matter of the lateral columns. (orig./GDG).

  2. The Pleurobemini (Bivalvia: Unionida) revisited: Molecular species delineation using a mitochondrial DNA gene reveals multiple conspecifics and undescribed species

    Science.gov (United States)

    Inoue, Kentaro; Hayes, David M.; Harris, John L.; Johnson, Nathan A.; Morrison, Cheryl L.; Eackles, Michael S.; King, Tim; Jones, Jess W.; Hallerman, Eric M.; Christian, Alan D.; Randklev, Charles R.

    2018-01-01

    The Pleurobemini (Bivalvia: Unionida) represent approximately one-third of freshwater mussel diversity in North America. Species identification within this group is challenging due to morphological convergence and phenotypic plasticity. Accurate species identification, including characterization of currently unrecognized taxa, is required to develop effective conservation strategies because many species in the group are imperiled. We examined 573 cox1 sequences from 110 currently recognized species (including 13 Fusconaia and 21 Pleurobema species) to understand phylogenetic relationships among pleurobemine species (mainly Fusconaia and Pleurobema) and to delineate species boundaries. The results of phylogenetic analyses showed no geographic structure within widespread species and illustrated a close relationship between Elliptio lanceolata and Parvaspina collina. Constraint tests supported monophyly of the genera Fusconaia and Pleurobema, including the subgenus P. (Sintoxia). Furthermore, results revealed multiple conspecifics, including P. hanleyianum and P. troschelianum, P. chattanoogaense and P. decisum, P. clava and P. oviforme, P. rubrum and P. sintoxia, F. askewi and F. lananensis, and F. cerina and F. flava. Species delimitation analyses identified three currently unrecognized taxa (two in Fusconaia and one in Pleurobema). Further investigation using additional genetic markers and other lines of evidence (e.g., morphology, life history, ecology) are necessary before any taxonomic changes are formalized.

  3. PENGARUH LOGAM BERAT Cd, Pb TERHADAP PERUBAHAN WARNA BATANG DAN DAUN SAYURAN

    Directory of Open Access Journals (Sweden)

    Hening Widowati

    2011-04-01

    Full Text Available Cd, Pb heavy metal absorption in aquatic vegetables: Genjer (Limnocharis flava, Kangkung air (Ipomoea aquatica Forsk dan Selada air (Nasturtium officinale R. Br, studied to see the relationship with green figure scale. The research objective was to identify the accumulated Cd, Pb in the consumed organ vegetable, and their impacts to the levels of green figure scale. The research was undertaken by planting three kinds of the aquatic vegetables to the contaminated pure Cd,pure Pb media, mixture of Cd and Pb with factorial randomized block design. Data were analyzed by factorial One-Way Anova and further test of Duncan and HSD to see the difference of Cd, Pb and green figure scale, regression and correlation to know the contribution of Cd, Pb in influencing the green figure scale. Variety of vegetables, media, organ, and the interaction influences the accumulation of Cd, Pb and level of green figure scale. There is a relationship between Cd, Pb metal accumulation to the level of green figure scale of the aquatic vegetables, with negative correlation that Cd, Pb decreased the vegetable green figure scale.

  4. Purification and characteristics of a novel bacteriocin produced by Enterococcus faecalis L11 isolated from Chinese traditional fermented cucumber.

    Science.gov (United States)

    Gao, Yurong; Li, Benling; Li, Dapeng; Zhang, Liyuan

    2016-05-01

    To purify and characterize a novel bacteriocin with broad inhibitory spectrum produced by an isolate of Enterococcus faecalis from Chinese fermented cucumber. E. faecalis L11 produced a bacteriocin with antimicrobial activity against both Escherichia coli and Staphylococcus aureus. The amino acid sequence of the purified bacteriocin, enterocin L11, was assayed by Edman degradation method. It differs from other class II bacteriocins and exhibited a broad antimicrobial activity against not only Gram-positive bacteria, including Bacillus subtilis, S. aureus, Listeria monocytogenes, Sarcina flava, Lactobacillus acidophilus, L. plantarum, L. delbrueckii subsp. delbrueckii, L. delbrueckii subsp. bulgaricus and Streptococcus thermophilus, but also some Gram-negative bacteria including Salmonella typhimurium, E. coli and Shigella flexneri. Enterocin L11 retained 91 % of its activity after holding at 121 °C for 30 min. It was also resistant to acids and alkalis. Enterocin L11 is a novel broad-spectrum Class II bacteriocin produced by E. faecalis L11, and may have potential as a food biopreservative.

  5. Ketertarikan Anaxipha longipennis Serville (Orthoptera: Gryllidae terhadap Beberapa Jenis Gulma di Sawah sebagai Tempat Bertelur

    Directory of Open Access Journals (Sweden)

    Sri Karindah

    2015-09-01

    Full Text Available Anaxipha longipennis Serville (Orthoptera: Gryllidae is one of the generalist predator in rice habitat that has a potential as a biological control agents of rice leaf folder eggs and small insects such as rice hoppers. Females insert their eggs in plant tissue. The female’s oviposition site is important for the subsequent distribution of the cricket. Oviposition preference on 17 weeds species from rice habitat were tested in a free choice experiment in the laboratory. There was strong evidence to conclude that the cricket preferred certain plant for laying eggs. In free choice experiment nine species of weeds were preferred by A. longipennis for laying their eggs instead of rice. The preferred species were ranked as follows: rice, Monochoria vaginalis, Cyperus rotundus, C. iria, Echinochloa colonum, E. crusgalli, Eleusine indica, Fimbristylis miliacea, Imperata cylindrica, and Limnocharis flava. Whereas Ageratum conyzoides, Alternanthera sessilis, Commelina diffusa, Leersia hexandra, Leptochloa chinensis, Ludwigia adscendens, Panicum repens, and Sonchus arvensis were not preferred in free-choice test.

  6. Expression and distribution of hyaluronic acid and CD44 in unphonated human vocal fold mucosa.

    Science.gov (United States)

    Sato, Kiminori; Umeno, Hirohito; Nakashima, Tadashi; Nonaka, Satoshi; Harabuchi, Yasuaki

    2009-11-01

    The tension caused by phonation (vocal fold vibration) is hypothesized to stimulate vocal fold stellate cells (VFSCs) in the maculae flavae (MFe) to accelerate production of extracellular matrices. The distribution of hyaluronic acid (HA) and expression of CD44 (a cell surface receptor for HA) were examined in human vocal fold mucosae (VFMe) that had remained unphonated since birth. Five specimens of VFMe (3 adults, 2 children) that had remained unphonated since birth were investigated with Alcian blue staining, hyaluronidase digestion, and immunohistochemistry for CD44. The VFMe containing MFe were hypoplastic and rudimentary. The VFMe did not have a vocal ligament, Reinke's space, or a layered structure, and the lamina propria appeared as a uniform structure. In the children, HA was distributed in the VFMe containing MFe. In the adults, HA had decreased in the VFMe containing MFe. In both groups, the VFSCs in the MFe and the fibroblasts in the lamina propria expressed little CD44. This study supports the hypothesis that the tensions caused by vocal fold vibration stimulate the VFSCs in the MFe to accelerate production of extracellular matrices and form the layered structure. Phonation after birth is one of the important factors in the growth and development of the human VFMe.

  7. Biogeographical homogeneity in the eastern Mediterranean Sea - I: the opisthobranchs (Mollusca: Gastropoda from Lebanon

    Directory of Open Access Journals (Sweden)

    F. CROCETTA

    2013-07-01

    Full Text Available A reviewed knowledge of the opisthobranch species from Lebanon (eastern Mediterranean Sea, based on literature records (scattered throughout various papers published over a period of more than 150 years and recently collected material (1999-2002 within the CEDRE framework and other samples, is presented, yielding a total number of 35 taxa recorded from the Lebanese shores identified to species level. Special emphasis has mainly been given to the alien species, for which scattered notes are also given. The known opisthobranch biota is composed of 22 native (~ 63%, 12 alien (~ 34% and one cryptogenic (~ 3% taxa. Eleven of these (Berthella aurantiaca, B. ocellata, Aplysia fasciata, Felimare picta, Felimida britoi, F. luteorosea, F. purpurea, Phyllidia flava, Dendrodoris grandiflora, D. limbata and Aeolidiella alderi constitute new records for the Lebanese fauna, whilst the examined material of a further seven species (Elysia grandifolia, Pleurobranchus forskalii, Aplysia dactylomela, Bursatella leachii, Syphonota geographica, Goniobranchus annulatus, Flabellina rubrolineata anecdotally cited from Lebanon on the basis of the samples here studied, is here first explained. One additional taxon belonging to the genus Haminoea has been identified to genus level only. Despite the searching effort poning the basis of the material analyzed here, data reported clearly suggest that strong investments are still needed for a better understanding of the eastern Mediterranean opisthobranch fauna.

  8. A novel gene's role in an ancient mechanism: secreted Frizzled-related protein 1 is a critical component in the anterior-posterior Wnt signaling network that governs the establishment of the anterior neuroectoderm in sea urchin embryos.

    Science.gov (United States)

    Khadka, Anita; Martínez-Bartolomé, Marina; Burr, Stephanie D; Range, Ryan C

    2018-01-01

    The anterior neuroectoderm (ANE) in many deuterostome embryos (echinoderms, hemichordates, urochordates, cephalochordates, and vertebrates) is progressively restricted along the anterior-posterior axis to a domain around the anterior pole. In the sea urchin embryo, three integrated Wnt signaling branches (Wnt/β-catenin, Wnt/JNK, and Wnt/PKC) govern this progressive restriction process, which begins around the 32- to 60-cell stage and terminates by the early gastrula stage. We previously have established that several secreted Wnt modulators of the Dickkopf and secreted Frizzled-related protein families (Dkk1, Dkk3, and sFRP-1/5) are expressed within the ANE and play important roles in modulating the Wnt signaling network during this process. In this study, we use morpholino and dominant-negative interference approaches to characterize the function of a novel Frizzled-related protein, secreted Frizzled-related protein 1 (sFRP-1), during ANE restriction. sFRP-1 appears to be related to a secreted Wnt modulator, sFRP3/4, that is essential to block Wnt signaling and establish the ANE in vertebrates. Here, we show that the sea urchin sFRP3/4 orthologue is not expressed during ANE restriction in the sea urchin embryo. Instead, our results indicate that ubiquitously expressed maternal sFRP-1 and Fzl1/2/7 signaling act together as early as the 32- to 60-cell stage to antagonize the ANE restriction mechanism mediated by Wnt/β-catenin and Wnt/JNK signaling. Then, starting from the blastula stage, Fzl5/8 signaling activates zygotic sFRP-1 within the ANE territory, where it works with the secreted Wnt antagonist Dkk1 (also activated by Fzl5/8 signaling) to antagonize Wnt1/Wnt8-Fzl5/8-JNK signaling in a negative feedback mechanism that defines the outer ANE territory boundary. Together, these data indicate that maternal and zygotic sFRP-1 protects the ANE territory by antagonizing the Wnt1/Wnt8-Fzl5/8-JNK signaling pathway throughout ANE restriction, providing precise

  9. Analysis of C. elegans NR2E nuclear receptors defines three conserved clades and ligand-independent functions

    Directory of Open Access Journals (Sweden)

    Weber Katherine P

    2012-06-01

    Full Text Available Abstract Background The nuclear receptors (NRs are an important class of transcription factors that are conserved across animal phyla. Canonical NRs consist of a DNA-binding domain (DBD and ligand-binding domain (LBD. While most animals have 20–40 NRs, nematodes of the genus Caenorhabditis have experienced a spectacular proliferation and divergence of NR genes. The LBDs of evolutionarily-conserved Caenorhabditis NRs have diverged sharply from their Drosophila and vertebrate orthologs, while the DBDs have been strongly conserved. The NR2E family of NRs play critical roles in development, especially in the nervous system. In this study, we explore the phylogenetics and function of the NR2E family of Caenorhabditis elegans, using an in vivo assay to test LBD function. Results Phylogenetic analysis reveals that the NR2E family of NRs consists of three broadly-conserved clades of orthologous NRs. In C. elegans, these clades are defined by nhr-67, fax-1 and nhr-239. The vertebrate orthologs of nhr-67 and fax-1 are Tlx and PNR, respectively. While the nhr-239 clade includes orthologs in insects (Hr83, an echinoderm, and a hemichordate, the gene appears to have been lost from vertebrate lineages. The C. elegans and C. briggsae nhr-239 genes have an apparently-truncated and highly-diverged LBD region. An additional C. elegans NR2E gene, nhr-111, appears to be a recently-evolved paralog of fax-1; it is present in C. elegans, but not C. briggsae or other animals with completely-sequenced genomes. Analysis of the relatively unstudied nhr-111 and nhr-239 genes demonstrates that they are both expressed—nhr-111 very broadly and nhr-239 in a small subset of neurons. Analysis of the FAX-1 LBD in an in vivo assay revealed that it is not required for at least some developmental functions. Conclusions Our analysis supports three conserved clades of NR2E receptors, only two of which are represented in vertebrates, indicating three ancestral NR2E genes in the

  10. A novel gene’s role in an ancient mechanism: secreted Frizzled-related protein 1 is a critical component in the anterior–posterior Wnt signaling network that governs the establishment of the anterior neuroectoderm in sea urchin embryos

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    Anita Khadka

    2018-01-01

    Full Text Available Abstract The anterior neuroectoderm (ANE in many deuterostome embryos (echinoderms, hemichordates, urochordates, cephalochordates, and vertebrates is progressively restricted along the anterior–posterior axis to a domain around the anterior pole. In the sea urchin embryo, three integrated Wnt signaling branches (Wnt/β-catenin, Wnt/JNK, and Wnt/PKC govern this progressive restriction process, which begins around the 32- to 60-cell stage and terminates by the early gastrula stage. We previously have established that several secreted Wnt modulators of the Dickkopf and secreted Frizzled-related protein families (Dkk1, Dkk3, and sFRP-1/5 are expressed within the ANE and play important roles in modulating the Wnt signaling network during this process. In this study, we use morpholino and dominant-negative interference approaches to characterize the function of a novel Frizzled-related protein, secreted Frizzled-related protein 1 (sFRP-1, during ANE restriction. sFRP-1 appears to be related to a secreted Wnt modulator, sFRP3/4, that is essential to block Wnt signaling and establish the ANE in vertebrates. Here, we show that the sea urchin sFRP3/4 orthologue is not expressed during ANE restriction in the sea urchin embryo. Instead, our results indicate that ubiquitously expressed maternal sFRP-1 and Fzl1/2/7 signaling act together as early as the 32- to 60-cell stage to antagonize the ANE restriction mechanism mediated by Wnt/β-catenin and Wnt/JNK signaling. Then, starting from the blastula stage, Fzl5/8 signaling activates zygotic sFRP-1 within the ANE territory, where it works with the secreted Wnt antagonist Dkk1 (also activated by Fzl5/8 signaling to antagonize Wnt1/Wnt8–Fzl5/8–JNK signaling in a negative feedback mechanism that defines the outer ANE territory boundary. Together, these data indicate that maternal and zygotic sFRP-1 protects the ANE territory by antagonizing the Wnt1/Wnt8–Fzl5/8–JNK signaling pathway throughout ANE

  11. Conodonts, Calcichordates and the Origin of Vertebrates

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    J. Bergström

    1998-01-01

    Full Text Available Interpretation of early deuterostome evolution and relationships has been hampered by the lack of soft-part preservation in most groups. In addition, a recently revealed upside-down life orientation of vertebrates (the only real notoneuralians compared to other bilateral animals has been misinterpreted as evidence for a unique body design in all deuterostomes, misleading any search for relatives. Regarding echinoderms, the variety of body plans is confusing. The interpretation of some fossils with echinoderm-type calcite skeletons as “calcichordate” ancestors of chordates, however, involves a hypothetical reconstruction of an unusual body plan and a long series of hypothetical transitions. The number of necessary steps is much lower if cephalochordates (amphioxus or lancelet are derived directly from hemichordate enteropneusts. “Sensation interpretations” of fossils (Yunnanozoon, Cathaymyrus from Burgess Shale type deposits have added further confusion. Soft-part preservation of conodont animals, with V-shaped myomeres and a notochord, shows that they were segmented chordates, while probable eyes and teeth suggest that they were already on the vertebrate side. Die Interpretation früher Deuterostomia hinsichtlich ihrer Evolution und verwandtschaftlichen Beziehungen ist in den meisten Gruppen durch den Mangel an Weichkörpererhaltung sehr erschwert. Die kürzlich entdeckte Tatsache, daß Vertebraten, d. h. die einzigen echten Notoneuralia, im Gegensatz zu anderen bilateral symmetrischen Organismen eine mit ihrer ursprünglichen Oberseite nach unten gerichtete Lebensstellung einnehmen, hat zu der irrtümlichen Ansicht geführt, daß alle Deuostomia über einen im Tierreich einzigartigen Bauplan verfügen. Diese Interpretation brachte naturgemäß jede Suche nach Verwandtschaftsverhältnissen auf Abwege. Hinsichtlich der Echinodermata ist die bauplanmäßige Variation in der Tat verwirrend. Die Interpretation einiger Fossilien mit

  12. Whole genome duplications and expansion of the vertebrate GATA transcription factor gene family

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    Bowerman Bruce

    2009-08-01

    Full Text Available Abstract Background GATA transcription factors influence many developmental processes, including the specification of embryonic germ layers. The GATA gene family has significantly expanded in many animal lineages: whereas diverse cnidarians have only one GATA transcription factor, six GATA genes have been identified in many vertebrates, five in many insects, and eleven to thirteen in Caenorhabditis nematodes. All bilaterian animal genomes have at least one member each of two classes, GATA123 and GATA456. Results We have identified one GATA123 gene and one GATA456 gene from the genomic sequence of two invertebrate deuterostomes, a cephalochordate (Branchiostoma floridae and a hemichordate (Saccoglossus kowalevskii. We also have confirmed the presence of six GATA genes in all vertebrate genomes, as well as additional GATA genes in teleost fish. Analyses of conserved sequence motifs and of changes to the exon-intron structure, and molecular phylogenetic analyses of these deuterostome GATA genes support their origin from two ancestral deuterostome genes, one GATA 123 and one GATA456. Comparison of the conserved genomic organization across vertebrates identified eighteen paralogous gene families linked to multiple vertebrate GATA genes (GATA paralogons, providing the strongest evidence yet for expansion of vertebrate GATA gene families via genome duplication events. Conclusion From our analysis, we infer the evolutionary birth order and relationships among vertebrate GATA transcription factors, and define their expansion via multiple rounds of whole genome duplication events. As the genomes of four independent invertebrate deuterostome lineages contain single copy GATA123 and GATA456 genes, we infer that the 0R (pre-genome duplication invertebrate deuterostome ancestor also had two GATA genes, one of each class. Synteny analyses identify duplications of paralogous chromosomal regions (paralogons, from single ancestral vertebrate GATA123 and GATA456

  13. Comportamento de abelhas visitantes florais de Lecythis lurida (Lecythidaceae no norte do estado do Rio de Janeiro Behavior of flower visiting bees of Lecythis lurida in the north of Rio de Janeiro state

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    Willian Moura Aguiar

    2008-01-01

    Full Text Available Este estudo descreve e analisa o comportamento dos visitantes florais de L. lurida em fragmentos de mata de tabuleiro. Esta espécie monóica floresceu de outubro a janeiro. As flores abriram-se entre 5h30 e 10h00 e a antese floral não ultrapassou um dia. Durante amostragens padronizadas foram coletadas 172 abelhas visitantes florais, pertencentes a 10 gêneros e 18 espécies. As maiores freqüências foram de Epicharis flava (42,3%, Xylocopa frontalis (16,3% e Eufriesea surinamensis (11,6%, com atividade principalmente de 7h00 às 11h00. Abelhas Centridini, Euglossina e Xylocopini buscam néctar nas flores e foram considerados polinizadores efetivos. Megachile coleta pólen e também é potencial polinizador. Oxaea flavescens atuou como pilhador de néctar, perfurando o capuz da flor. Experimentos de polinização indicaram ausência de autopolinização espontânea e baixa taxa de frutificação (0,48% sob condições naturais. Como observado para outras espécies zigomórficas de Lecythidaceae, a complexa morfologia floral restringe os visitantes a abelhas de grande porte ou abelhas robustas que conseguem entrar pelo capuz floral. Entretanto, Centridini foi principal grupo de polinizadores de L.lurida, o que difere dos polinizadores indicados em outros trabalhos sobre Lecythis e outros gêneros de Lecythidaceae na região amazônica.This study describes and analyses the behavior of L. lurida flower visitors in fragments of tabuleiro lowland forest. This monoecious species flowered from October to January. The flowers opened between 5:30 and 10:00 a.m. and floral anthesis did not exceed one day. Standardizing samples on flowers resulted in 172 bees, belonging to ten genera and 18 species. Epicharis flava (42,3%, Xylocopa frontalis (16,3% and Eufriesea surinamensis (11,6% performed the highest relative frequencies, mainly occuring between 7:00 and 11:00a.m. Centridini, Euglossina and Xylocopini bees took nectar on flowers and were considered

  14. Glowworms: a review of Arachnocampa spp. and kin.

    Science.gov (United States)

    Meyer-Rochow, V B

    2007-01-01

    The term 'glowworm' is used in connection with the flightless females of lampyrid fireflies and to describe the luminescent larvae of certain fungus gnats that belong to the subfamilies Arachnocampinae, Keroplatinae and Macrocerinae of the dipteran family Keroplatidae. This review focuses on the luminescent larval fungus gnats. The weakly luminescent species of the Holarctic feed mainly on fungal spores, but some, such as Orfelia fultoni, have turned to a carnivorous diet. Larval Australian and New Zealand Arachnocampa spp. produce brighter in vivo (but not necessarily in vitro) lights, live in cool, damp and dark places and are exclusively predatory. They lure their prey (usually small flying insects) with the help of their blue-green light emissions towards snares consisting of vertical silk threads coated with sticky mucus droplets. Fungus gnats with similar 'fishing lines' are found in the Neotropics, but they are not luminescent. The larval stage is longest in the life cycle of Arachnocampa, lasting up to a year, depending on climatic conditions such as temperature and humidity as well as food supply. In A. luminosa, but not the Australian A. flava, female pupae and even female imagines are luminescent. However, it remains to be demonstrated whether it is the light of the female, a pheromone or both that attract the males. Light organs and the chemical reactions to produce light differ between the holarctic and the Australian/New Zealand species. Prey is attracted only by the glowworm's light; odours of the fishing lines or the glowworms themselves are not involved. Recognition of the prey by the glowworm involves mechano- and chemoreception. The eyes of both larval and adult glowworms are large and functional over a spectral range covering UV to green wavelengths. Adults are poor fliers, live only for a few days, have degenerate mouth parts and do not feed. Maintenance of glowworms in captivity is possible and the impact of tourism on glowworms in natural

  15. KETAHANAN HIDUP BEBERAPA JENIS TUMBUHAN DI KAWASAN VOID BEKAS TAMBANG BATUBARA

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    Kissinger Kissinger

    2018-04-01

    Full Text Available The selection of plant species for phytoremediation activities is very important in the conservation of soil, water, plant, and animal life to create a conducive environment within a community or ecosystem. Plant survival is one indication for the selection of phytoremediation plants. This study aims to determine the survival of some plants in void areas of coal mining. Types of plants used are surface water plants species and the edge of void plant species. The plants of surface water area consisting of Kiambang (Salvinia sp., Enceng gondok (Eichornia crassipes, Genjer (Limnocharis flava, and Kangkung (Ipomoea aquatica. The plants which planted on edge of void were purun tikus (Eleocharis dulcis and Bamban (Donax canniformis. Time of observation time was 6 months. Data were analyzed using a tabular matrix that contained the percentage of plant life/period time. The growth of the plant is specifically defined according to the color visibility and the development of plant form. The results of the study found that the highest surface survival species were Kiambang (Salvinia sp. and Kangkung (Ipomoea aquatica. Both of them still survive for 6 months of observation. The growth percentage of these two plants at the end of the observations are 36% and 20% respectively. Enceng gondok (Eichhornia crassipes has a survival for 4 months. Whole water plant growth was depressed by indications of death, tendencies to yellowish-brownish or blackish, and smaller body parts. Purun tikus (Eleocharis dulcis and Bamban (Donax canniformis grown on the edge of voids have a high survival. Both of them showed ≥95% survival at the end of observation time.

  16. The bird species of Kumasir lake (Kahramanmaras-Turkey) and a view of environmental ethics on sustainable wetland management.

    Science.gov (United States)

    Inac, S; Gorucu, O; Pinar, A H

    2008-05-01

    Kumasir lake is located next to towns of Donuklu and Fatih, nine km west of Kahramanmaras city center the region of east Mediterranean, Turkey This lake is of crucial importance from the point of native and immigrant birds. We located 17 birdspecies in this area during our observations carried out in the spring and autumn of 2005-2006. These were Ciconia ciconia L., Anas platyrhynchos L., Accipiter nisus L., Accipiter brevipes L., Fulica atra L., Columba palumbus L., Merops apiaster L., Upupa epops L., Alauda arvensis L., Motacilla flava L., Turdus merula L., Acrocephalus scirpaceus L., Regulus regulus L., Garrulus glandarius L., Corvus corax L., Fringilla coelebs L., Hirundo rustica L.. Among observed 17 species; 6 of them were immigrant and remaining 11 of them were native birds. Kumasir lake is surrounded by wetland of Amik and Gavur lake. Since it was greatly dried, it was transformed to farmland. Consequently the birds lost most of theirnests and settlements. However not taken in the care of environmental ethic values, the wastewaters of the villages drain to lake reservoir; herbicides and insecticides used for agriculture are polluting the water reeds have been burned, the lake's reeds are getting dry by the irrigation for the farmland. So, the wetland ecosystem is being affected negatively by these factors. On the other hand, the birds are exposed to illegal and unlawful hunting. For this reasons, this lake must be taken into a management regime of sustainable wetland (protection profiting balance) and used techniques of participation planning via the process of sustainable natural resources and planning.

  17. The Pleurobemini (Bivalvia: Unionida) revisited: Molecular species delineation using a mitochondrial DNA gene reveals multiple conspecifics and undescribed species

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    Inoue, Kentaro; Hayes, David M.; Harris, John L.; Johnson, Nathan A.; Morrison, Cheryl L.; Eackles, Michael S.; King, Tim; Jones, Jess W.; Hallerman, Eric M.; Christian, Alan D.; Randklev, Charles R.

    2018-01-01

    The Pleurobemini (Bivalvia: Unionida) represent approximately one-third of freshwater mussel diversity in North America. Species identification within this group is challenging due to morphological convergence and phenotypic plasticity. Accurate species identification, including characterisation of currently unrecognised taxa, is required to develop effective conservation strategies because many species in the group are imperiled. We examined 575 cox1 sequences from 110 currently recognised species (including 13 Fusconaia and 21 Pleurobema species) to understand phylogenetic relationships among pleurobemine species (mainly Fusconaia and Pleurobema) and to delineate species boundaries. The results of phylogenetic analyses showed no geographic structure within widespread species and illustrated a close relationship between Elliptio lanceolata and Parvaspina collina. Constraint tests supported monophyly of the genera Fusconaia and Pleurobema, including the subgenus P. (Sintoxia). Furthermore, results revealed multiple conspecifics, including P. hanleyianum and P. troschelianum, P. chattanoogaense and P. decisum, P. clava and P. oviforme, P. rubrum and P. sintoxia, F. askewi and F. lananensis, and F. cerina and F. flava. Species delimitation analyses identified three currently unrecognised taxa (two in Fusconaia and one in Pleurobema). Further investigation using additional genetic markers and other lines of evidence (e.g. morphology, life history, ecology) are necessary before any taxonomic changes are formalised.

  18. The improvement of the quality of polluted irrigation water through a phytoremediation process in a hydroponic batch culture system

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    Retnaningdyah, Catur

    2017-11-01

    The objective of this research was to determine the effectiveness of a phytoremediation process using some local hydro macrophytes to reduce fertilizer residue in irrigation water in order to support healthy agriculture and to prevent eutrophication and algae bloom in water. A phytoremediation process was carried out in a hydroponic floating system by using transparent plastic bags of 1 m in diameter and 1 m in height that were placed in collecting ponds before they were used for agricultural activities. Paddy soils were used as substrates in this system. The irrigation water was treated with nutrient enrichment (Urea and SP-36 fertilizers). Then, the system was planted with remediation actors (Azolla sp., Ipomoea aquatica, Limnocharis flava, Marsilea crenata, polyculture of those hydro macrophytes and control). The improvement of the water quality as a result of the phytoremediation process was characterized by a decline in the concentration of some physicochemical parameters, which were measured at 7 days after incubation, as well as an increase in the plankton diversity index value. The results showed that all of the hydro macrophytes used in this research, which was grown in the hydroponic batch culture system for a period of 7 days, were able to significantly improve the irrigation water quality, which was enriched by the synthetic fertilizers Urea and SP36. This was reflected by a significant decrease in the concentration of water TSS, nitrate, BOD, COD and total phosphate and an increase in the value of water DO at 7 days after incubation. Improvement of the water quality is also reflected in the increasing plankton diversity index value as a bioindicator of water pollution indicating a change in the pollution status from moderately polluted to slightly polluted at 7 days after incubation.

  19. Evaluation of relocation of unionid mussels into artificial ponds

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    Newton, T.J.; Monroe, E.M.; Kenyon, R.; Gutreuter, S.; Welke, K.I.; Thiel, P.A.

    2001-01-01

    Relocation of unionid mussels into refuges (e.g., hatchery ponds) has been suggested as a management tool to protect these animals from the threat of zebra mussel (Dreissena polymorpha) invasion. To evaluate the efficacy of relocation, we experimentally relocated 768 mussels, representing 5 species (Leptodea fragilis, Obliquaria reflexa, Fusconaia flava, Amblema plicata, and Quadrula quadrula) into an earthen pond at a National Fish Hatchery or back into the river. In both locations, mussels were placed into 1 of 4 treatments (mesh bags, corrals, and buried or suspended substrate-filled trays). Mussels were examined annually for survival, growth (shell length and wet mass), and physiological condition (glycogen concentration in foot and mantle and tissue condition index) for 36 mo in the pond or 40 mo in the river. We observed significant differences in mortality rates between locations (mortality was 4 times greater in the pond than in the river), among treatments (lowest mortality in the suspended trays), and among species (lower mortality in the amblemines than lamp-silines). Overall survival in both locations averaged 80% the 1st year; survival in the pond decreased dramatically after that. Although length and weight varied between locations and over time, these changes were small, suggesting that their utility as short-term measures of well being in long-lived unionids is questionable. Mussels relocated to the pond were in poor physiological condition relative to those in the river, but the magnitude of these differences was small compared to the inherent variability in physiological condition of reference mussels. These data suggest that relocation of unionids into artificial ponds is a high-risk conservation strategy; alternatives such as introduction of infected host fish, identification of mussel beds at greatest risk from zebra mussels, and a critical, large-scale assessment of the factors contributing to their decline should be explored.

  20. Biodegradation of international jet A-1 aviation fuel by microorganisms isolated from aircraft tank and joint hydrant storage systems.

    Science.gov (United States)

    Itah, A Y; Brooks, A A; Ogar, B O; Okure, A B

    2009-09-01

    Microorganisms contaminating international Jet A-1 aircraft fuel and fuel preserved in Joint Hydrant Storage Tank (JHST) were isolated, characterized and identified. The isolates were Bacillus subtillis, Bacillus megaterium, Flavobacterium oderatum, Sarcina flava, Micrococcus varians, Pseudomonas aeruginosa, Bacillus licheniformis, Bacillus cereus and Bacillus brevis. Others included Candida tropicalis, Candida albicans, Saccharomyces estuari, Saccharomyces cerevisiae, Schizosaccharomyces pombe, Aspergillus flavus, Aspergillus niger, Aspergillus fumigatus, Cladosporium resinae, Penicillium citrinum and Penicillium frequentans. The viable plate count of microorganisms in the Aircraft Tank ranged from 1.3 (+/-0.01) x 104 cfu/mL to 2.2 (+/-1.6) x 104 cfu/mL for bacteria and 102 cfu/mL to 1.68 (+/-0.32) x 103 cfu/mL for fungi. Total bacterial counts of 1.79 (+/-0.2) x 104 cfu/mL to 2.58 (+/-0.04) x 104 cfu/mL and total fungal count of 2.1 (+/-0.1) x 103 cfu/mL to 2.28 (+/-0.5) x 103 cfu/mL were obtained for JHST. Selected isolates were re-inoculated into filter sterilized aircraft fuels and biodegradation studies carried out. After 14 days incubation, Cladosporium resinae exhibited the highest degradation rate with a percentage weight loss of 66 followed by Candida albicans (60.6) while Penicillium citrinum was the least degrader with a weight loss of 41.6%. The ability of the isolates to utilize the fuel as their sole source of carbon and energy was examined and found to vary in growth profile between the isolates. The results imply that aviation fuel could be biodegraded by hydrocarbonoclastic microorganisms. To avert a possible deterioration of fuel quality during storage, fuel pipe clogging and failure, engine component damage, wing tank corrosion and aircraft disaster, efficient routine monitoring of aircraft fuel systems is advocated.

  1. Classification of spondylolytic clefts in patients with spondylolysis or isthmic spondylolisthesis using positional MRI.

    Science.gov (United States)

    Niggemann, Pascal; Kuchta, Johannes; Hadizadeh, Dariusch; Pieper, Claus Christian; Schild, Hans Heinz

    2017-02-01

    Background Posterior instability is a pathologic movement occurring in the spondylolytic cleft. Purpose To present a new classification system for the evaluation of spondylolytic cleft by positional magnetic resonance imaging (MRI) and determine the prevalence of the different types. Material and Methods A total of 176 segments of the lumbar spine with spondylolysis or isthmic spondylolisthesis were examined using positional MRI. Scans were obtained in neutral sitting, flexion, and extension positions. No visible movement in the cleft was defined as type A, fluid displaced into the cleft as type BI, displacement of the flava ligaments at the level of the cleft as type BII, and intraspinal cysts arising from the spondylolytic cleft as type BIII. The movements were characterized by a radiologist and a neurosurgeon experienced in positional MRI. Clinical findings were correlated with the different types of instability. Results A high agreement was found between the two observers. In total, 131 segments were characterized as type A, six as type BI, 24 as type BII, and 10 as type BIII. In five segments, the type differed between the right and the left side. Two patients had a mixed type BI/II, another two patients had a mixed type BII/III, and one patient had a mixed type BI/III. Patients with type BII and BIII instabilities suffered more often from radicular symptoms compared to patients without any instability. Conclusion The presented classification might help to better understand and study changes encountered in the spondylolytic cleft in patients with spondylolysis and isthmic spondylolisthesis using positional MRI.

  2. Computed tomography in cervical spondylotic myelopathy and radiculopathy: Visualisation of structures, myelographic comparison, cord measurements and clinical utility

    International Nuclear Information System (INIS)

    Yu, Y.L.; Du Boulay, G.H.; Stevens, J.M.; Kendall, B.E.

    1986-01-01

    Sixty-nine patients with cervical spondylotic myelopathy (CSM), radiculopathy (CSR), or both (CSMR) were studied with computed tomography (CT). Computer-assisted myelography (CAM) accurately determines the site and nature of spondylotic protrusions and provides good visualisation of the subarachnoid space and cord deformities even in areas with dilute metrizamide. However, excessive vertebral movement and bulging ligamenta flava with their effects on cord deformity, so easily visualised in myelograms, are completely or partially missed. In the assessment of CSM, metrizamide myelography (MM) followed by CAM should be performed, particularly when the myelographic images are unsatisfactory due to contrast dilution or blockage, when cord compression cannot be ascertained with MM and when cord atrophy is suspected. In CSR, the diagnostic information from MM and CAM is comparable. The diagnostic criteria in CAM are, however, less direct and since MM is adequate in uncomplicated cases, CAM is generally not necessary. The APD, APD/TD ratio, area and circularity are sensitive indices of cord deformity and the first two should be used more often to assist visual assessment of cord deformity. The relation between cord parameters and treatment response is better reflected in CSM cases managed conservatively and the results suggest that the degree of cord deformity is helpful in determining the outcome and hence the choice between surgical and conservative treatment. In plain CT, the osteophytes and calcified discs are adequately visualised and canal dimensions measured with accuracy, but the cervical cord and roots cannot be properly assessed and the diagnosis of CSM or CSR cannot be ascertained. At present, its role in cervical spondylosis is therefore limited. (orig.)

  3. Effects of an oil spill on leafpack-inhabiting macroinvertebrates in the Chariton river, Missouri

    Science.gov (United States)

    Poulton, B.C.; Callahan, E.V.; Hurtubise, R.D.; Mueller, B.G.

    1998-01-01

    Artificial leaf packs were used to determine the effects of an oil spill on stream macroinvertebrate communities in the Chariton River, Missouri. Plastic mesh leaf retainers with approximately 10 g of leaves from five tree species were deployed at five sites (two upstream of the spill and three downstream) immediately after the spill and one year later. Four macroinvertebrate species dominating the community at upstream sites were virtually eliminated below the spill, including the stonefly Isoperla bilineata, the caddisfly Potamyia flava, the midge Thienemanniella xena, and blackfly larvae (Simulium sp.). Density of collector and shredder functional groups, and number of shredder taxa differed between upstream sites and the two furthest downstream sites during the 1990 sample period (Kruskal-Wallis w/Bonferroni paired comparisons, experiment wise error rate = 0.05). With one exception, no differences between sites were detected in the 1991-1992 sample period, indicating that the benthic community had at least partially recovered from the oil spill after one year. The odds of obtaining a sample with a small abundance of shredders (abundance < median) in 1990 was significantly greater downstream of the spill than upstream, and the odds of obtaining a sample with a small abundance of shredders at downstream sites was greater in 1990 than in 1991-1992. A similar pattern was observed in abundance and taxa richness of the collector functional group. No significant differences between the two sampling periods were detected at upstream sites. Observed effects appeared to be associated with oil sorption and substrate coating, creating conditions unsuitable for successful colonization.

  4. Diversity and useful products in some Verbenaceous member of Melghat and Amravati regions, Maharashtra, India

    Directory of Open Access Journals (Sweden)

    SHUBHANGI NAGORAO INGOLE

    2011-07-01

    Full Text Available Ingole SN (2011 Diversity and useful products in some Verbenaceous member of Melghat and Amravati regions, Maharashtra, India. Biodiversitas 12: 146-163. Verbenaceae is a large family of very diverse habit. The present study deals with detailed characteristics, distribution and economically important products of some verbenaceous members of Melghat and Amravati regions. During the survey twenty members belonging to fourteen genera of Verbenaceae were collected. Some members occur abundantly either in wild or cultivated state like Lantana camara L. var. aculeata Mold., Lantana flava Medik., L. nivea Vent., Glandularia bipinnatifida (Schauer Nutt., Duranta erecta L., Vitex negundo L., Volkameria inermis L., Clerodendrum phlomidis L. f., Clerodendrum splendens G. Don, Nyctanthes arbor-tristis L. etc. while Petrea volubilis L., Gmelina arborea Roxb., G. phillippensis Cham., Stachytarpheta jamaicensis (L. Vahl., S. mutabilis (Jacq. Vahl., Rotheca serrata (L. Steane & Mabb., Holmskioldia sanguinea Retz. are not much common and occur in limited locations. Phyla nodiflora (L. Greene, a creeping much-branched herb is found typically in wet places. Tectona grandis L. f. occurs very variable in size according to its habitat and is common dominant tree in forest of Melghat and also planted in plains. Clerodendrum infortunatum L., a gregarious tomentose shrub is exclusively found in shades of forest at limited spots in higher elevations of Melghat. The various members are not only beautiful ornamentals but also the source of important medicinal products useful in a broad range of diseases including skin disorders and snake remedies; they contain alkaloids, sterols, saponin, glucosides, dyes etc. and are economically quite important e.g. as high quality timber. On basis of morphological diversity the generic key is provided.

  5. PEMANFAATAN PESTISIDA NABATI PADA PENGENDALIAN HAMA PLUTELLA XYLOSTELLA TANAMAN SAWI (Brassica juncea L. MENUJU PERTANIAN RAMAH LINGKUNGAN

    Directory of Open Access Journals (Sweden)

    suhartini suhartini

    2017-05-01

    ABSTRACT The use of chemical pesticides has many negative impacts on the environment, it is necessary for the use of biological pesticide towards sustainable agriculture or environmentally friendly agriculture. In the village were encountered many types of leaves that can be used as a biological pesticide, and therefore this study aims to determine the effectiveness of pesticide plant extracts of the leaves of some plants covering the leaves of tobacco, elephantopus, yellow wood and green betel on mortality of Plutella xylostella pests in plants mustard greens (Brassica juncea L, heavy wet mustard and mustard leaf damage    This study uses a completely randomized design with the treatment of various crops as a pesticide vegetable. The treatments used 6 kinds (degree ie negative control (P0, the leaves of tobacco (P1, the leaves of elephantopus (P2, the leaves of yellow wood (P3, the leaves of greens betel (P4 and chemical pesticides as a positive control (P5 with each grade of 10 %. Parameters measured were mortality pests, heavy wet mustard greens and mustard greens leaf damage rate. The analysis was performed by one-way ANOVA.    The results showed that the extract from the leaves of tobacco (Nicotiana tabacum, the leaves of elephantopus, the leaves of yellow wood (Arcangelisia flava L. and the leaves of green betel (Piper betle Linn. With a 10 percent concentration of the extract on a variety of  leaves are not yet significant effect on mortality pests Plutella xylostella, heavy wet of mustard greens (brassica juncea l. and severity of leaf mustard greens (brassica juncea l.. The leaf extract the most influence on mortality Plutella xylostella sequential is an extract of the leaves tobacco, the leaves of greens betel, the leaves of yellow wood and the leaves of elephantopus. While the effect on weight of wet mustard greens (Brassica juncea l. in order are as follows: the leaves of yellow wood, the leaves of green betel, the leaves of elephantopus, and the

  6. A synopsis of the tribe Micrutalini Haupt (Homoptera, Membracidae, Smiliinae

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    Albino M. Sakakibara

    1999-01-01

    Full Text Available The tribe Micrutalini and its two genera, Trachytalis Fowler and Micrutalis Fowler, are redescribed. The following species are treated and, in some cases, nomenclatura! changes introduced: Trachytalis isabellina Fowler, 1895; T. distinguenda Fowler, 1895; T. retrofasciata (Lethierry, 1890, comb.n.; Micrutalis alrovena Goding, 1930; M. balteata (Fairmaire, 1846 = Aculalis lucidus Buckton, 1902, syn.n.; M. bella Goding, 1929; M. biguttula (Fairmaire, 1846, comb.n.; M. binaria (Fairmaire, 1846 = Acutalis flavivenlris Lethierry, 1890, syn.n.; M. callan-gensis Goding, 1930; M. calva (Say, 1830; M. discalis (Walker, 1858; M. dorsalis (Fitch, 1851; M. dubia Fowler, 1895 = M. zeteki Goding, 1928, syn.n.; M. flava Goding, 1929; M. flavozonala (Fairmaire, 1846, comb.n. = Acutalis geniculata Stál, 1862, syn.n. = Acutalis modesta Stál, 1862, syn.n.; M. godfreyi Sakakibara, 1976; M. incerla Sakakibara, 1976; M. lata Goding, 1930; M. litlerala (Fairmaire, 1846, comb.n.;M lugubrina(Stál, 1862;M malleiferaFovj]er, 1895 = M binariamutabilis Fowler, 1895, syn.n.; M. minutus Buckton, 1902; M. nigrolineata (Stál, 1864; M. nigromarginata Funkhouser, 1940; M. notalipennis Fowler, 1895; M. occidentalis (Goding, 1893; M. pollens Fowler, 1895; M. parva (Goding, 1893; M. plagíala (Stál, l&62 = AcutalisvariabiIisBerg, 1879,syn.n. =M. chapadensisGoding, 1930,syn.n.; M. punctifera (Walker, 1858; M. semialba (Stál, 1862; M. stipulipennis Buckton, 1902; M. tau Goding, 1930; M. trifurcala Goding, 1893; M. tripunctata (Fairmaire, 1846 = Acutalis moesta Stál, 1859, syn.n. = M. tartaredoides Goding, 1930, syn.n.. New species: Micrutalis diminuta sp.n. (Ecuador, Pichincha; Micrutalis divisa sp.n. (Brazil, Mato Grosso; Micrutalis henki sp.n. (Panama, Canal Zone; Micrutalis infúscala sp.n. (Venezuela, Portuguesa; Micrutalis margínala sp.n. (Brazil, Mato Grosso; Micrutalis meridana sp.n. (Venezuela, Mérida; Micrutalis mucuya sp.n. (Venezuela, Mérida; Micrutalis robustula

  7. Romulea pilosa and R. quartzicola (Iridaceae: Crocoideae, two new species from the southern African winter rainfall region, with nomenclatural corrections

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    J. C. Manning

    2011-12-01

    Full Text Available Romulea pilosa J.C.Manning & Goldblatt and R. quartzicola J.C.Manning & Goldblatt are two narrow endemics from the southern African winter rainfall region. An early, fragmentary collection of R. pilosa from Riviersonderend lacked the diagnostic corm and was thus mistakenly associated with R. tetragona (sect. Ciliatae as var. flavandra M.P.de Vos because of the highly distinctive pilose, H-shaped leaf. The rediscovery of the taxon in the wild shows it to be a previously unrecognized member of sect. Aggregatae, distinguished by its unusual foliage and bright orange flowers. R. quartzicola was grown to flowering from seeds collected from quartz patches in southern Namaqualand and proved to be a new species of sect. Ciliatae, distinguished by its early flowering, short, subclavate leaves with reduced sclerenchyma strands, and bright yellow flowers with short bracts. R. neglecta M.P.de Vos, a rare endemic from the Kamiesberg in Northern Cape, is a later homonym for the Mediterranean R. neglecta Jord. & Fourr., and the earliest name for this plant is shown to be R. speciosa (Ker Gawl. Baker, typified by an illustration in Andrews’ The botanist’s repository. An epitype is designated to fix the application of the name. We have also examined the type illustration of R. pudica (Sol. ex Ker Gawl. Baker, hitherto treated as an uncertain species, and are confident that it represents the species currently known as R. amoena Schltr. ex Bég., and takes priority over it as being the earlier name. The type of R. reflexa Eckl., a new name for the later homonym I. reflexa Thunb. and the basionym of R. rosea var. reflexa (Eckl. Bég., has been mistakenly identified as an Ecklon collection but is in fact the collection that formed the basis of Thunberg’s I. reflexa. This collection is actually a form of R. flava Lam., and the name R. rosea var. reflexa is thus moved to the synonomy of that species. The variety currently known under this name should now be

  8. Bromeliaceae from Pico Piraí, Guaratuba Municipality (Parana, Brazil Bromeliaceae Juss. do Pico Piraí, município de Guaratuba (Paraná, Brasil

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    Rosemeri Morokawa

    2011-12-01

    Full Text Available The results of a Bromeliaceae Juss. floristic survey in the Piraí Mountain, Araraquara complex(Guaratuba Municipality, Paraná State are presented. Twenty six species included in nine genera and three subfamilies were registered. Bromelioideae presented the highest genera diversity and Tillandsioideae showed the highest species diversity, including twelve species belonging to the genus Vriesea (46%. It was the first register of Nidularium procerum Lindm., Tillandsia stricta Sol. ex Ker Gawl., Vriesea altodaserrae L. B. Sm., Vriesea erythrodactylon (E. Morren E. Morren ex Mez, Vrieseaflava And.Costa, H. Luther & Wand., Vriesea friburgensis Mez, Vriesea hoehneana L. B. Sm., Vriesea inflata (Wawra Wawra e Wittrockia superba Lindm. at the Guaratuba Municipality. Dyckia leptostachya Baker was collected for the first time at the coastal zone of Paraná State, being this record done after 40 years since its last register in the State. For each species, information on phenology, geographic distribution and vulnerability level are included. Apresentam-se resultados de levantamento florístico das espécies de Bromeliaceae Juss. no Pico Piraí, Complexo do Araraquara (Guaratuba, Paraná. Verificou-se a ocorrência de 26 espécies pertencentes a nove gêneros e três subfamílias. Bromelioideae englobou a maior diversidade de gêneros e Tillandsioideae registrou-se a maior diversidade de espécies, sendo 12 delas incluídas no gênero Vriesea (46%. As seguintes espécies foram registradas pela primeira vez no município de Guaratuba: Nidularium procerum Lindm., Tillandsia stricta Sol. ex Ker Gawl., Vriesea altodaserrae L. B. Sm., Vriesea erythrodactylon (E. Morren E. Morren ex Mez, Vriesea flava And. Costa, H. Luther & Wand.,Vriesea friburgensis Mez, Vriesea hoehneana L. B. Sm., Vriesea inflata (Wawra Wawra e Wittrockia superba Lindm.. Dyckia leptostachya Baker foi registrada pela primeira vez na zona litorânea paranaense e após 40 anos do último

  9. Enfoques mucosales en vacunologia de Neisseria

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    Pérez O

    2009-08-01

    Full Text Available Meningococcal B strains accounts for some 72% and 28% of meningococcal diseases in infants and toddlers in Europe and the USA, respectively. Nevertheless, meningococcal diseases are rare in Cuba owing to the wide spread program on antimeningococcal vaccination in the country. Finlay Institute is one of the pioneering organizations in Neisseria Vaccinology mainly by its contribution to N. meningitidis serogroup B outer membrane-based bivalent vaccine, VA-MENGOC-BC™. This vaccine was given intramuscularly in more than 60 million doses corresponding 10.7 millions of them to Cuban young adults, children, and infants. However, most dangerous or commensally Neisseria strains enter and establish in the mucosa, where the secretory (S IgA is the main specific guardian and is mainly induced by mucosal routes. However, few mucosal vaccines exist principally due to the absent of mucosal adjuvants. We develop a Finlay Adjuvant (AF platform based in outer membrane vesicles (Proteoliposome, PL and its derivate Cochleate (Co. AFPL1 derived from serogroup B N. meningitidis is a potent Th1/CTL driving parenteral adjuvant. AFCo1 is a potent mucosal adjuvant. Therefore, we sought to go deeper in the possible mucosal cross recognition between N. meningitidis serogroups and Neisseria species and explore a concurrent mucosal and parenteral immunization strategy (SinTimVaS in order to develop suitable mucosal vaccines. Experiments were conducted in Balb/c or C57Bl6 mice with mucosal and systemic immunization using AFCo1 and AFPL1. Human sera and saliva were also analyzed for cross cognition. Mucosal cross recognition at SIgA level in human saliva between N. meningitidis serogroups B, A, C, Y, and W135 were observed. This SIgA cross recognition response was also observed between pathogenic (N. meningitidis serogroup B, N. gonorrhoeae and non-pathogenic strains (N. flava, N. lactamica. The possible influence of meningococcal vaccination against Gonorrhea was also

  10. Nomenclatural adjustments in African plants 1

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    Peter Goldblatt

    2014-12-01

    and the new combination G. ornithogaloides subsp. flava (Klatt Goldblatt & J.C.Manning was provided for the taxon currently treated as G. ornithogaloides subsp. ornithogaloides. Lastly, Reyemia Hilliardwas reduced to a synonym of Zaluziaskya as sect. Reyemia (Hilliard J.C.Manning & Goldblattand the new combination Zaluziaskya chasmanthiflora (Hilliard J.C.Manning & Goldblatt was provided. A neotype was selected for Zaluziaskya nemesioides Diels.

  11. Stable isotopes (C, N, O, H) of feathers collected in an Italian alpine region, during postbreeding migration

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    Bontempo, Luana; Ceppa, Florencia; Pedrini, Paolo; Tenan, Simone; Camin, Federica

    2013-04-01

    Over the last 20 years the analysis of stable isotope ratios of carbon, nitrogen, oxygen, hydrogen and sulphur have gradually become a formidable tool for the animal ecologists (Hobson and Wassenaar, 1997; Marra et al., 1998; Inger and Bearhop, 2008). In particular many studies have been developed on tracking the movement and the diet of birds in time and space, fundamental to understanding their ecology, but also inherently difficult to determine. The aim of this study was to deepen the origin and behaviour of migratory bird species crossing the Trentino area, an Italian alpine region, during the post-nuptial migration period, and monitored by a long term study by ringing activities (Progetto Alpi, Pedrini et al. 2008). About 800 samples of feathers from 48 local bird species were collected during 2010 - 2012 years. Analysis of d13C, d15N, d18O and dD were performed on these samples using an Isotope Ratio Mass Spectrometer (IRMS) interfaced with an Elemental Analyser or a pyrolyser after a pre-treatment of the feathers (cleaning with diethyl ether:methanol 2:1, equilibration to ambient humitity for 4 days and, for d18O and dD a final drying step wth P2O5 for another 4 days). A first survey of the obtained data is presented in this work. As expected, the first statistical elaboration/'look' of them confirmed that 13C can be used to trace the importance of different carbon pools to a consumer (e.g. C3, C4 or CAM plants, marine algae) whereas d15N vary as a function of a variety of biological, geochemical and anthropogenic processes and is a very effective tracer of trophic level. In particular, it was interesting to note that the specie Loxia curvirostra showed particularly high d13C and low d15N values probably due to the eating of conifer seeds and whereas the specie Motacilla flava, that bases its diet primarily on worms and insects, presented high d15N values. On the other hand d18O values mainly depends by geographical/diet factors whereas dD values are

  12. Robust species taxonomy assignment algorithm for 16S rRNA NGS reads: application to oral carcinoma samples

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    Nezar Noor Al-Hebshi

    2015-09-01

    Full Text Available Background: Usefulness of next-generation sequencing (NGS in assessing bacteria associated with oral squamous cell carcinoma (OSCC has been undermined by inability to classify reads to the species level. Objective: The purpose of this study was to develop a robust algorithm for species-level classification of NGS reads from oral samples and to pilot test it for profiling bacteria within OSCC tissues. Methods: Bacterial 16S V1-V3 libraries were prepared from three OSCC DNA samples and sequenced using 454's FLX chemistry. High-quality, well-aligned, and non-chimeric reads ≥350 bp were classified using a novel, multi-stage algorithm that involves matching reads to reference sequences in revised versions of the Human Oral Microbiome Database (HOMD, HOMD extended (HOMDEXT, and Greengene Gold (GGG at alignment coverage and percentage identity ≥98%, followed by assignment to species level based on top hit reference sequences. Priority was given to hits in HOMD, then HOMDEXT and finally GGG. Unmatched reads were subject to operational taxonomic unit analysis. Results: Nearly, 92.8% of the reads were matched to updated-HOMD 13.2, 1.83% to trusted-HOMDEXT, and 1.36% to modified-GGG. Of all matched reads, 99.6% were classified to species level. A total of 228 species-level taxa were identified, representing 11 phyla; the most abundant were Proteobacteria, Bacteroidetes, Firmicutes, Fusobacteria, and Actinobacteria. Thirty-five species-level taxa were detected in all samples. On average, Prevotella oris, Neisseria flava, Neisseria flavescens/subflava, Fusobacterium nucleatum ss polymorphum, Aggregatibacter segnis, Streptococcus mitis, and Fusobacterium periodontium were the most abundant. Bacteroides fragilis, a species rarely isolated from the oral cavity, was detected in two samples. Conclusion: This multi-stage algorithm maximizes the fraction of reads classified to the species level while ensuring reliable classification by giving priority to the

  13. Florística y fisonomía de un matorral xerófilo espinoso intervenido en Punta de Piedras, Municipio Miranda, Estado Zulia, Venezuela

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    Antonio Vera

    2009-06-01

    Full Text Available Se determinaron los aspectos florísticos y fisonómicos de un matorral xerófilo espinoso intervenido de Punta de Piedras, municipio Miranda, estado Zulia, Venezuela. Se realizaron dieciséis muestreos quincenales, entre noviembre 2005 y junio 2006, para la recolecta, identificación y conteo de las especies tanto en el periodo lluvioso como en el seco. Los muestreos se llevaron a cabo en 10 manchones de vegetación con un área promedio de 718 ± 706.24 m², en una formación graminiforme en la que se emplearon tres parcelas de 20 x 20 (400 m², dividiéndose cada una de éstas en cuatro subparcelas de 20 x 5 (100 m² y a su vez, dentro de ellas, se delimitaron 12 subparcelas de 1 x 1. (1 m², y también se realizaron recorridos para el reconocimiento de otras especies de la zona. El matorral xerófilo espinoso mostró evidencias de intervención antropogénica como quemas periódicas, deposición de desechos sólidos, caminerías para el tránsito de las personas y asentamientos poblacionales en las zonas circunvecinas; y presentó una vegetación semiárida de espinar costero característica y comparable a la señalada para otras regiones del país. Se identificaron 45 especies agrupadas en 22 familias, entre las cuales destacaron: las Poaceae (6, Mimosaceae (4, Boraginaceae (3, Cactaceae (3 Caesalpinaceae (3, Euphorbiaceae (3 y Fabaceae (3. La intervención antropogénica parece generar la aparición de manchones de vegetación arbustiva y arbórea y de una formación graminiforme o pastizal. En esta última, Aristida venesuelae, Aristida pittieri y Portulaca pilosa presentaron los mayores valores de abundancia y frecuencia relativa cuya sumatoria corresponde a 49.38% y 46.86%, respectivamente; mientras que en los manchones se destacaron dos estratos: uno herbáceo menor a 1 m, y otro estrato arbustivo-arbóreo de bajo porte (2.63 ± 1.37 m de altura media, conformado principalmente por Opuntia wentiana, Piptadenia flava y Jatropha

  14. The avifauna of the National Nature Park "Homilshanski Lisy"

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    A. B. Chaplygina

    2016-03-01

    Full Text Available In the recreational zone of "Homilshanski Lisy" National Park 137 species of birds were identified during the period 1980–2015, of which 127 species nest, 8 winter, and 2 observed during the spring migration. The nesting species are distributed in 4 ecological groups dominated by dendrophylls (67 species, with fewer limnophylls-fresh water species (29, campophylls-open country species (16 and sclerophylls (11. Among the nesting birds 11 landscape-genetic faunal assemblages were distinguished, dominated by typical nemoral-woodland (19%, tropical (14% and forest-steppe (13% species. The average density of the birds nesting in the park amounts to 1.2 ± 0.2 with n overall density of 148.3 pairs/km route line. The habitat distribution of the bird population was relatively even. The most intensively populated habitat was upland oak forest, the least were pine and mixed forests. It was found that the communities of breeding birds in tree plantations changed due to the natural aging process of forests, which has led to an increase in the number of birds of prey (Falconiiformes, woodpeckers (Piciformes, secondary hollow-nesting birds. The bird communities of floodplain and steppe meadows, as well as habitats in residential areas subject to constant recreational pressure, changed under the pressure of anthropogenic loading. The favorable natural and geographical location of the park and the diversity of its habitats contributed to the emergence in the list of fauna of which are expanding their range. Analysis of the dominant species in the community points to a significant negative impact of recreational pressure on all habitats of the park. The dominant birds in the pinewood community list included only one campophyll, tree pipit (Anthus trivialis L.. For the steppe meadows, in addition to the dominant colonial birds that nest in holes , the yellow wagtail (Motacilla flava L. was marked as subdominant. In general, in the recreational area of NPP

  15. A companion to Part 2 of the World Checklist of Opiliones species (Arachnida): Laniatores - Samooidea, Zalmoxoidea and Grassatores incertae sedis.

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    Kury, Adriano B; Pérez-González, Abel

    2015-01-01

    A series of databases is being prepared to list the valid species of Opiliones worldwide. This paper containing nomenclatural acts is meant to accompany Part 2, which includes the members of the infraorder Grassatores of the superfamilies Samooidea and Zalmoxoidea plus the Grassatores currently not allocated to any family (i.e. Grassatores incertae sedis). The following 32 taxonomic changes are proposed here: (1-3) The Afrotropical genera Hovanoceros Lawrence, 1959, Malgaceros Lawrence, 1959 and Tetebius Roewer, 1949 (all currently in Samoidae) are all newly transferred to Biantidae. (4-5) Microminua soerenseni Soares & Soares, 1954, from Brazil is newly transferred to Tibangara (Gonyleptoidea: Cryptogeobiidae), newly combined as Tibangara soerenseni new comb., new familial allocation for the species. (6-7) The new genus Llaguenia Gen. nov is erected for the South American species Zamora peruviana Roewer, 1956, newly combined as Llaguenia peruviana new comb., and newly placed in Gonyleptoidea: Cranaidae (Prostygninae). (8) Bebedoura Roewer, 1949, known from a single Brazilian species, is transferred from Tricommatinae to Grassatores incertae sedis. (9) Microconomma Roewer, 1915, known from a single Cameroonian species, is transferred from Samoidae to Grassatores incertae sedis. (10) Stygnomimus Roewer, 1927, with two Indomalayan species and hitherto included in the Stygnommatidae, is here formally considered Grassatores incertae sedis. (11) Bichito González-Sponga, 1998, known from a single Venezuelan species, originally described in Phalangodidae: Phalangodinae, and currently in Grassatores incertae sedis is transferred to Samoidae. (12) The Neotropical genus Microminua Sørensen, 1932, currently with two species, is newly transferred from Kimulidae to Samoidae. (13-14) Cornigera González-Sponga, 1987 (currently in Samoidae), is newly considered a junior subjective synonym of Microminua, and its single species is combined under Microminua as Microminua flava