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Sample records for heavy metal-responsive transcription

  1. Interactions between plant hormones and heavy metals responses.

    Science.gov (United States)

    Bücker-Neto, Lauro; Paiva, Ana Luiza Sobral; Machado, Ronei Dorneles; Arenhart, Rafael Augusto; Margis-Pinheiro, Marcia

    2017-01-01

    Heavy metals are natural non-biodegradable constituents of the Earth's crust that accumulate and persist indefinitely in the ecosystem as a result of human activities. Since the industrial revolution, the concentration of cadmium, arsenic, lead, mercury and zinc, amongst others, have increasingly contaminated soil and water resources, leading to significant yield losses in plants. These issues have become an important concern of scientific interest. Understanding the molecular and physiological responses of plants to heavy metal stress is critical in order to maximize their productivity. Recent research has extended our view of how plant hormones can regulate and integrate growth responses to various environmental cues in order to sustain life. In the present review we discuss current knowledge about the role of the plant growth hormones abscisic acid, auxin, brassinosteroid and ethylene in signaling pathways, defense mechanisms and alleviation of heavy metal toxicity.

  2. Interactions between plant hormones and heavy metals responses

    Directory of Open Access Journals (Sweden)

    Lauro Bücker-Neto

    2017-04-01

    Full Text Available Abstract Heavy metals are natural non-biodegradable constituents of the Earth's crust that accumulate and persist indefinitely in the ecosystem as a result of human activities. Since the industrial revolution, the concentration of cadmium, arsenic, lead, mercury and zinc, amongst others, have increasingly contaminated soil and water resources, leading to significant yield losses in plants. These issues have become an important concern of scientific interest. Understanding the molecular and physiological responses of plants to heavy metal stress is critical in order to maximize their productivity. Recent research has extended our view of how plant hormones can regulate and integrate growth responses to various environmental cues in order to sustain life. In the present review we discuss current knowledge about the role of the plant growth hormones abscisic acid, auxin, brassinosteroid and ethylene in signaling pathways, defense mechanisms and alleviation of heavy metal toxicity.

  3. Characterization and localization of metal-responsive-element-binding transcription factors from tilapia

    International Nuclear Information System (INIS)

    Cheung, Andrew Pok-Lap; Au, Candy Yee-Man; Chan, William Wai-Lun; Chan, King Ming

    2010-01-01

    Two isoforms of MTF-1, MTF-1L (long form) and MTF-1S (short form), were cloned in tilapia (Ti) and characterized in a tilapia liver cell line, Hepa-T1. The cloned tiMTF-1L has the characteristics of all of the tiMTF-1S identified so far with the zinc finger domain having six fingers, the acidic-rich, proline-rich, and serine/threonine-rich domains; however, the short form encodes for the zinc finger domain with five zinc fingers only and no other domains. The transient transfection of tiMTF-1L into human HepG2 cells showed both constitutive and zinc-induced metal-responsive-element (MRE)-driven reporter gene expression. However, the transfection of tiMTF-1S (which lacks all three transactivation domains) into a human cell line showed reduced transcriptional activities compared with an endogenous control in both basal- and Zn 2+ -induced conditions. The tiMTF-1 isoforms were tagged with GFP and transfected into Hepa-T1 cells (tilapia hepatocytes). The nuclear translocation of tiMTF-1L was observed when the cells were exposed to a sufficient concentration of metals for 6 h. However, tiMTF-1S, was localized in the nucleus with or without metal treatment. Electrophoretic mobility shift assay (EMSA) confirmed that both of the isoforms were able to bind to the MRE specifically in vitro. Tissue distribution studies showed that tiMTF-1L was more abundant than tiMTF-1S in all of the tissues tested.

  4. Characterization and localization of metal-responsive-element-binding transcription factors from tilapia

    Energy Technology Data Exchange (ETDEWEB)

    Cheung, Andrew Pok-Lap; Au, Candy Yee-Man; Chan, William Wai-Lun [Department of Biochemistry, Chinese University of Hong Kong, Sha Tin, N.T., Hong Kong (Hong Kong); Chan, King Ming, E-mail: kingchan@cuhk.edu.hk [Department of Biochemistry, Chinese University of Hong Kong, Sha Tin, N.T., Hong Kong (Hong Kong)

    2010-08-01

    Two isoforms of MTF-1, MTF-1L (long form) and MTF-1S (short form), were cloned in tilapia (Ti) and characterized in a tilapia liver cell line, Hepa-T1. The cloned tiMTF-1L has the characteristics of all of the tiMTF-1S identified so far with the zinc finger domain having six fingers, the acidic-rich, proline-rich, and serine/threonine-rich domains; however, the short form encodes for the zinc finger domain with five zinc fingers only and no other domains. The transient transfection of tiMTF-1L into human HepG2 cells showed both constitutive and zinc-induced metal-responsive-element (MRE)-driven reporter gene expression. However, the transfection of tiMTF-1S (which lacks all three transactivation domains) into a human cell line showed reduced transcriptional activities compared with an endogenous control in both basal- and Zn{sup 2+}-induced conditions. The tiMTF-1 isoforms were tagged with GFP and transfected into Hepa-T1 cells (tilapia hepatocytes). The nuclear translocation of tiMTF-1L was observed when the cells were exposed to a sufficient concentration of metals for 6 h. However, tiMTF-1S, was localized in the nucleus with or without metal treatment. Electrophoretic mobility shift assay (EMSA) confirmed that both of the isoforms were able to bind to the MRE specifically in vitro. Tissue distribution studies showed that tiMTF-1L was more abundant than tiMTF-1S in all of the tissues tested.

  5. The metal-responsive transcription factor-1 contributes to HIF-1 activation during hypoxic stress

    International Nuclear Information System (INIS)

    Murphy, Brian J.; Sato, Barbara G.; Dalton, Timothy P.; Laderoute, Keith R.

    2005-01-01

    Hypoxia-inducible factor-1 (HIF-1), the major transcriptional regulator of the mammalian cellular response to low oxygen (hypoxia), is embedded within a complex network of signaling pathways. We have been investigating the importance of another stress-responsive transcription factor, MTF-1, for the adaptation of cells to hypoxia. This article reports that MTF-1 plays a central role in hypoxic cells by contributing to HIF-1 activity. Loss of MTF-1 in transformed Mtf1 null mouse embryonic fibroblasts (MEFs) results in an attenuation of nuclear HIF-1α protein accumulation, HIF-1 transcriptional activity, and expression of an established HIF-1 target gene, glucose transporter-1 (Glut1). Mtf1 null (Mtf1 KO) MEFs also have constitutively higher levels of both glutathione (GSH) and the rate-limiting enzyme involved in GSH synthesis-glutamate cysteine ligase catalytic subunit-than wild type cells. The altered cellular redox state arising from increased GSH may perturb oxygen-sensing mechanisms in hypoxic Mtf1 KO cells and decrease the accumulation of HIF-1α protein. Together, these novel findings define a role for MTF-1 in the regulation of HIF-1 activity

  6. Copper Sensing Function of Drosophila Metal-Responsive Transcription Factor-1 Is Mediated By a Tetranuclear Cu(I) Cluster

    Energy Technology Data Exchange (ETDEWEB)

    Chen, X.; Hua, H.; Balamurugan, K.; Kong, X.; Zhang, L.; George, G.N.; Georgiev, O.; Schaffner, W.; Giedroc, D.P.

    2009-05-12

    Drosophila melanogaster MTF-1 (dMTF-1) is a copper-responsive transcriptional activator that mediates resistance to Cu, as well as Zn and Cd. Here, we characterize a novel cysteine-rich domain which is crucial for sensing excess intracellular copper by dMTF-1. Transgenic flies expressing mutant dMTF-1 containing alanine substitutions of two, four or six cysteine residues within the sequence {sup 547}CNCTNCKCDQTKSCHGGDC{sup 565} are significantly or completely impaired in their ability to protect flies from copper toxicity and fail to up-regulate MtnA (metallothionein) expression in response to excess Cu. In contrast, these flies exhibit wild-type survival in response to copper deprivation thus revealing that the cysteine cluster domain is required only for sensing Cu load by dMTF-1. Parallel studies show that the isolated cysteine cluster domain is required to protect a copper-sensitive S. cerevisiae ace1 strain from copper toxicity. Cu(I) ligation by a Cys-rich domain peptide fragment drives the cooperative assembly of a polydentate [Cu{sub 4}-S{sub 6}] cage structure, characterized by a core of trigonally S{sub 3} coordinated Cu(I) ions bound by bridging thiolate ligands. While reminiscent of Cu{sub 4}-L{sub 6} (L = ligand) tetranuclear clusters in copper regulatory transcription factors of yeast, the absence of significant sequence homology is consistent with convergent evolution of a sensing strategy particularly well suited for Cu(I).

  7. Dumpy-30 family members as determinants of male fertility and interaction partners of metal-responsive transcription factor 1 (MTF-1 in Drosophila

    Directory of Open Access Journals (Sweden)

    Renkawitz-Pohl Renate

    2008-06-01

    Full Text Available Abstract Background Metal-responsive transcription factor 1 (MTF-1, which binds to metal response elements (MREs, plays a central role in transition metal detoxification and homeostasis. A Drosophila interactome analysis revealed two candidate dMTF-1 interactors, both of which are related to the small regulatory protein Dumpy-30 (Dpy-30 of the worm C. elegans. Dpy-30 is the founding member of a protein family involved in chromatin modifications, notably histone methylation. Mutants affect mating type in yeast and male mating in C. elegans. Results Constitutive expression of the stronger interactor, Dpy-30L1 (CG6444, in transgenic flies inhibits MTF-1 activity and results in elevated sensitivity to Cd(II and Zn(II, an effect that could be rescued by co-overexpression of dMTF-1. Electrophoretic mobility shift assays (EMSA suggest that Dpy-30L1 interferes with the binding of MTF-1 to its cognate MRE binding site. Dpy-30L1 is expressed in the larval brain, gonads, imaginal discs, salivary glands and in the brain, testes, ovaries and salivary glands of adult flies. Expression of the second interactor, Dpy-30L2 (CG11591, is restricted to larval male gonads, and to the testes of adult males. Consistent with these findings, dpy-30-like transcripts are also prominently expressed in mouse testes. Targeted gene disruption by homologous recombination revealed that dpy-30L1 knockout flies are viable and show no overt disruption of metal homeostasis. In contrast, the knockout of the male-specific dpy-30L2 gene results in male sterility, as does the double knockout of dpy-30L1 and dpy-30L2. A closer inspection showed that Dpy-30L2 is expressed in elongated spermatids but not in early or mature sperm. Mutant sperm had impaired motility and failed to accumulate in sperm storage organs of females. Conclusion Our studies help to elucidate the physiological roles of the Dumpy-30 proteins, which are conserved from yeast to humans and typically act in concert with

  8. Whole-genome transcriptional analysis of heavy metal stresses inCaulobacter crescentus

    Energy Technology Data Exchange (ETDEWEB)

    Hu, Ping; Brodie, Eoin L.; Suzuki, Yohey; McAdams, Harley H.; Andersen, Gary L.

    2005-09-21

    The bacterium Caulobacter crescentus and related stalkbacterial species are known for their distinctive ability to live in lownutrient environments, a characteristic of most heavy metal contaminatedsites. Caulobacter crescentus is a model organism for studying cell cycleregulation with well developed genetics. We have identified the pathwaysresponding to heavy metal toxicity in C. crescentus to provide insightsfor possible application of Caulobacter to environmental restoration. Weexposed C. crescentus cells to four heavy metals (chromium, cadmium,selenium and uranium) and analyzed genome wide transcriptional activitiespost exposure using a Affymetrix GeneChip microarray. C. crescentusshowed surprisingly high tolerance to uranium, a possible mechanism forwhich may be formation of extracellular calcium-uranium-phosphateprecipitates. The principal response to these metals was protectionagainst oxidative stress (up-regulation of manganese-dependent superoxidedismutase, sodA). Glutathione S-transferase, thioredoxin, glutaredoxinsand DNA repair enzymes responded most strongly to cadmium and chromate.The cadmium and chromium stress response also focused on reducing theintracellular metal concentration, with multiple efflux pumps employed toremove cadmium while a sulfate transporter was down-regulated to reducenon-specific uptake of chromium. Membrane proteins were also up-regulatedin response to most of the metals tested. A two-component signaltransduction system involved in the uranium response was identified.Several differentially regulated transcripts from regions previously notknown to encode proteins were identified, demonstrating the advantage ofevaluating the transcriptome using whole genome microarrays.

  9. A comprehensive set of transcript sequences of the heavy metal hyperaccumulator Noccaea caerulescens

    Directory of Open Access Journals (Sweden)

    YA-FEN eLIN

    2014-06-01

    Full Text Available Noccaea caerulescens is an extremophile plant species belonging to the Brassicaceae family. It has adapted to grow on soils containing high, normally toxic, concentrations of metals such as nickel, zinc and cadmium. Next to being extremely tolerant to these metals, it is one of the few species known to hyperaccumulate these metals to extremely high concentrations in their aboveground biomass. In order to provide additional molecular resources for this model metal hyperaccumulator species to study and understand the mechanism of heavy metal exposure adaptation, we aimed to provide a comprehensive database of transcript sequences for N. caerulescens. In this study, 23830 transcript sequences (isotigs with an average length of 1025 bps were determined for roots, shoots and inflorescences of N. caerulescens accession ‘Ganges’ by Roche GS-FLEX 454 pyrosequencing. These isotigs were grouped into 20,378 isogroups, representing potential genes. This is a large expansion of the existing N. caerulescens transcriptome set consisting of 3705 unigenes. When compared to a Brassicaceae proteome set, 22,232 (93.2% of the N. caerulescens isotigs (corresponding to 19191 isogroups had a significant match and could be annotated accordingly. Of the remaining sequences, 98 isotigs resembled non-plant sequences and 1386 had no significant similarity to any sequence in the GenBank database. Among the annotated set there were many isotigs with similarity to metal homeostasis genes or genes for glucosinolate biosynthesis. Only for transcripts similar to Metallothionein3 (MT3, clear evidence for an additional copy was found. This comprehensive set of transcripts is expected to further contribute to the discovery of mechanisms used by N. caerulescens to adapt to heavy metal exposure.

  10. Transcriptional and physiological responses of nitrifying bacteria to heavy metal inhibition

    Science.gov (United States)

    Heavy metals have been shown to inhibit nitrification, a key process in the removal of nitrogen in wastewater treatment plants. In the present study, the effects of nickel, zinc, lead and cadmium on nitrifying enrichment cultures were studied in batch reactors. The transcriptiona...

  11. Assessment of complex water pollution with heavy metals and Pyrethroid pesticides on transcript levels of metallothionein and immune related genes.

    Science.gov (United States)

    Ghazy, Haneen A; Abdel-Razek, Mohamed A S; El Nahas, Abeer F; Mahmoud, Shawky

    2017-09-01

    Alteration of immunological function of an aquatic organism can be used as an indicator for evaluating the direct effect of exposure to pollutants. The aim of this work is to assess the impact of complex water pollution with special reference to Pyrethroid pesticides and heavy metals on mRNA transcript levels of Metallothionine and some immune related genes of Nile tilapia (Oreochromas Niloticus). Residues of six heavy metals and six Pyrethroid were assessed in water as well as fish tissues at three different sites of Lake Burullus, located at Northern Egypt. Variations of water physicochemical properties associated with different levels of heavy metals at the three different sections were recorded. Tissue residues of Fe, Mn and Zn, Cu, Ni exceed water levels in contrast to elevated water level of Pb. All assessed Pyrethroids are detected in fish tissue samples with higher concentration (3-42 folds) than that found in water samples especially Cypermethrin. Significant down-regulation of expression levels of metallothionein (MT) at the three sections of the lake was observed. The expression of immune related genes (IgM) and inflammatory cytokines (TNF, IL.8 and IL.1) were affected. IgM and TNF were significantly down-regulated at eastern and western section of the lake; meanwhile the expression of IL8 is down regulated at the three sections of the lack. IL1 was significantly up-regulated at eastern and middle sections. We conclude that, variable gene expression of MT and immune-related genes at the three sections of the lack impose different response to complex water pollution in relation to variable aquatic environment. Copyright © 2017 Elsevier Ltd. All rights reserved.

  12. Effects of exposure to Prestige-like heavy fuel oil and to perfluorooctane sulfonate on conventional biomarkers and target gene transcription in the thicklip grey mullet Chelon labrosus

    Energy Technology Data Exchange (ETDEWEB)

    Bilbao, E.; Raingeard, D.; Diaz de Cerio, O.; Ortiz-Zarragoitia, M.; Ruiz, P.; Izagirre, U.; Orbea, A.; Marigomez, I.; Cajaraville, M.P. [Laboratory of Cell Biology and Histology, Department of Zoology and Animal Cell Biology, School of Science and Technology, University of the Basque Country, E-48080 Bilbao, Basque Country (Spain); Cancio, I., E-mail: ibon.cancio@ehu.es [Laboratory of Cell Biology and Histology, Department of Zoology and Animal Cell Biology, School of Science and Technology, University of the Basque Country, E-48080 Bilbao, Basque Country (Spain)

    2010-07-01

    Thicklip grey mullets Chelon labrosus inhabit coastal and estuarine areas where they can be chronically exposed to commonly released pollutants such as polycyclic aromatic hydrocarbons (PAHs) and perfluorinated compounds. These pollutants can also originate from accidental spills, such as the Prestige oil spill in 2002, which resulted in the release of a heavy fuel oil that affected coastal ecosystems in the Bay of Biscay. Peroxisome proliferation (PP), induced biotransformation metabolism, immunosuppression and endocrine disruption are some of the possible biological effects caused by such chemicals. With the aim of studying the effects of organic toxic chemicals on such biological processes at the transcriptional and at the cell/tissue level, juvenile mullets were exposed to the typical mammalian peroxisome proliferator perfluorooctane sulfonate (PFOS), and to fresh (F) and weathered (WF) Prestige-like heavy fuel oil for 2 and 16 days. First, fragments of genes relevant to biotransformation, immune/inflammatory and endocrine disruption processes were cloned using degenerate primers. Fuel oil elicited a significant PP response as proved by the transcriptional upregulation of palmitoyl-CoA oxidase (aox1), peroxisome proliferator activated receptor {alpha} (ppar{alpha}) and retinoic X receptor, by the AOX1 activity induction and by the increased peroxisomal volume density. PFOS only elicited a significant induction of AOX1 activity at day 2 and of PPAR{alpha} mRNA expression at day 16. All treatments significantly increased catalase mRNA expression at day 16 in liver and at day 2 in gill. Cyp1a transcription (liver and gill) and EROD activity were induced in fuel oil treated organisms. In the case of phase II metabolism only hepatic glutathione S-transferase mRNA was overexpressed in mullets exposed to WF for 16 days. Functionally, this response was reflected in a significant accumulation of bile PAH metabolites. WF treated fish accumulated mainly high molecular

  13. Effects of exposure to Prestige-like heavy fuel oil and to perfluorooctane sulfonate on conventional biomarkers and target gene transcription in the thicklip grey mullet Chelon labrosus

    International Nuclear Information System (INIS)

    Bilbao, E.; Raingeard, D.; Diaz de Cerio, O.; Ortiz-Zarragoitia, M.; Ruiz, P.; Izagirre, U.; Orbea, A.; Marigomez, I.; Cajaraville, M.P.; Cancio, I.

    2010-01-01

    Thicklip grey mullets Chelon labrosus inhabit coastal and estuarine areas where they can be chronically exposed to commonly released pollutants such as polycyclic aromatic hydrocarbons (PAHs) and perfluorinated compounds. These pollutants can also originate from accidental spills, such as the Prestige oil spill in 2002, which resulted in the release of a heavy fuel oil that affected coastal ecosystems in the Bay of Biscay. Peroxisome proliferation (PP), induced biotransformation metabolism, immunosuppression and endocrine disruption are some of the possible biological effects caused by such chemicals. With the aim of studying the effects of organic toxic chemicals on such biological processes at the transcriptional and at the cell/tissue level, juvenile mullets were exposed to the typical mammalian peroxisome proliferator perfluorooctane sulfonate (PFOS), and to fresh (F) and weathered (WF) Prestige-like heavy fuel oil for 2 and 16 days. First, fragments of genes relevant to biotransformation, immune/inflammatory and endocrine disruption processes were cloned using degenerate primers. Fuel oil elicited a significant PP response as proved by the transcriptional upregulation of palmitoyl-CoA oxidase (aox1), peroxisome proliferator activated receptor α (pparα) and retinoic X receptor, by the AOX1 activity induction and by the increased peroxisomal volume density. PFOS only elicited a significant induction of AOX1 activity at day 2 and of PPARα mRNA expression at day 16. All treatments significantly increased catalase mRNA expression at day 16 in liver and at day 2 in gill. Cyp1a transcription (liver and gill) and EROD activity were induced in fuel oil treated organisms. In the case of phase II metabolism only hepatic glutathione S-transferase mRNA was overexpressed in mullets exposed to WF for 16 days. Functionally, this response was reflected in a significant accumulation of bile PAH metabolites. WF treated fish accumulated mainly high molecular weight metabolites

  14. Effects of exposure to Prestige-like heavy fuel oil and to perfluorooctane sulfonate on conventional biomarkers and target gene transcription in the thicklip grey mullet Chelon labrosus.

    Science.gov (United States)

    Bilbao, E; Raingeard, D; de Cerio, O Diaz; Ortiz-Zarragoitia, M; Ruiz, P; Izagirre, U; Orbea, A; Marigómez, I; Cajaraville, M P; Cancio, I

    2010-07-01

    Thicklip grey mullets Chelon labrosus inhabit coastal and estuarine areas where they can be chronically exposed to commonly released pollutants such as polycyclic aromatic hydrocarbons (PAHs) and perfluorinated compounds. These pollutants can also originate from accidental spills, such as the Prestige oil spill in 2002, which resulted in the release of a heavy fuel oil that affected coastal ecosystems in the Bay of Biscay. Peroxisome proliferation (PP), induced biotransformation metabolism, immunosuppression and endocrine disruption are some of the possible biological effects caused by such chemicals. With the aim of studying the effects of organic toxic chemicals on such biological processes at the transcriptional and at the cell/tissue level, juvenile mullets were exposed to the typical mammalian peroxisome proliferator perfluorooctane sulfonate (PFOS), and to fresh (F) and weathered (WF) Prestige-like heavy fuel oil for 2 and 16 days. First, fragments of genes relevant to biotransformation, immune/inflammatory and endocrine disruption processes were cloned using degenerate primers. Fuel oil elicited a significant PP response as proved by the transcriptional upregulation of palmitoyl-CoA oxidase (aox1), peroxisome proliferator activated receptor alpha (pparalpha) and retinoic X receptor, by the AOX1 activity induction and by the increased peroxisomal volume density. PFOS only elicited a significant induction of AOX1 activity at day 2 and of PPARalpha mRNA expression at day 16. All treatments significantly increased catalase mRNA expression at day 16 in liver and at day 2 in gill. Cyp1a transcription (liver and gill) and EROD activity were induced in fuel oil treated organisms. In the case of phase II metabolism only hepatic glutathione S-transferase mRNA was overexpressed in mullets exposed to WF for 16 days. Functionally, this response was reflected in a significant accumulation of bile PAH metabolites. WF treated fish accumulated mainly high molecular weight

  15. Levels of myosin heavy chain mRNA transcripts and content of protein isoforms in the slow soleus muscle of 7 month-old rats with altered thyroid status

    Czech Academy of Sciences Publication Activity Database

    Vadászová, Adriana; Hudecová, S.; Križanová, O.; Soukup, Tomáš

    2006-01-01

    Roč. 55, č. 2 (2006), s. 221-225 ISSN 0862-8408 R&D Projects: GA ČR(CZ) GD305/03/H148; GA ČR(CZ) GA304/05/0327 Grant - others:VEGA(SK) 2/6078; SAV(SK) APVT-51-027404; NATO(XE) 979876; MYORES(XE) 511978 Institutional research plan: CEZ:AV0Z50110509 Keywords : myosin heavy chain * thyroid hormones status * mRNA transcripts Subject RIV: ED - Physiology Impact factor: 2.093, year: 2006

  16. Direct interactions of OCA-B and TFII-I regulate immunoglobulin heavy-chain gene transcription by facilitating enhancer-promoter communication.

    Science.gov (United States)

    Ren, Xiaodi; Siegel, Rachael; Kim, Unkyu; Roeder, Robert G

    2011-05-06

    B cell-specific coactivator OCA-B, together with Oct-1/2, binds to octamer sites in promoters and enhancers to activate transcription of immunoglobulin (Ig) genes, although the mechanisms underlying their roles in enhancer-promoter communication are unknown. Here, we demonstrate a direct interaction of OCA-B with transcription factor TFII-I, which binds to DICE elements in Igh promoters, that affects transcription at two levels. First, OCA-B relieves HDAC3-mediated Igh promoter repression by competing with HDAC3 for binding to promoter-bound TFII-I. Second, and most importantly, Igh 3' enhancer-bound OCA-B and promoter-bound TFII-I mediate promoter-enhancer interactions, in both cis and trans, that are important for Igh transcription. These and other results reveal an important function for OCA-B in Igh 3' enhancer function in vivo and strongly favor an enhancer mechanism involving looping and facilitated factor recruitment rather than a tracking mechanism. Copyright © 2011 Elsevier Inc. All rights reserved.

  17. A plasmid containing the human metallothionein II gene can function as an antibody-assisted electrophoretic biosensor for heavy metals.

    Science.gov (United States)

    Wooten, Dennis C; Starr, Clarise R; Lyon, Wanda J

    2016-01-01

    Different forms of heavy metals affect biochemical systems in characteristic ways that cannot be detected with typical metal analysis methods like atomic absorption spectrometry. Further, using living systems to analyze interaction of heavy metals with biochemical systems can be laborious and unreliable. To generate a reliable easy-to-use biologically-based biosensor system, the entire human metallothionein-II (MT-II) gene was incorporated into a plasmid (pUC57-MT) easily replicated in Escherichia coli. In this system, a commercial polyclonal antibody raised against human metal-responsive transcription factor-1 protein (MTF-1 protein) could modify the electrophoretic migration patterns (i.e. cause specific decreases in agarose gel electrophoretic mobility) of the plasmid in the presence or absence of heavy metals other than zinc (Zn). In the study here, heavy metals, MTF-1 protein, and polyclonal anti-MTF-1 antibody were used to assess pUC57-MT plasmid antibody-assisted electrophoretic mobility. Anti-MTF-1 antibody bound both MTF-1 protein and pUC57-MT plasmid in a non-competitive fashion such that it could be used to differentiate specific heavy metal binding. The results showed that antibody-inhibited plasmid migration was heavy metal level-dependent. Zinc caused a unique mobility shift pattern opposite to that of other metals tested, i.e. Zn blocked the antibody ability to inhibit plasmid migration, despite a greatly increased affinity for DNA by the antibody when Zn was present. The Zn effect was reversed/modified by adding MTF-1 protein. Additionally, antibody inhibition of plasmid mobility was resistant to heat pre-treatment and trypsinization, indicating absence of residual DNA extraction-resistant bacterial DNA binding proteins. DNA binding by anti-DNA antibodies may be commonly enhanced by xenobiotic heavy metals and elevated levels of Zn, thus making them potentially effective tools for assessment of heavy metal bioavailability in aqueous solutions and

  18. Lability of Nanoparticulate Metal Complexes at a Macroscopic Metal Responsive (Bio)interface

    NARCIS (Netherlands)

    Duval, Jérôme F.L.; Town, Raewyn M.; Leeuwen, Van Herman P.

    2018-01-01

    The lability of metal complexes expresses the extent of the dissociative contribution of the complex species to the flux of metal ions toward a macroscopic metal-responsive (bio)interface, for example, an electrodic sensor or an organism. While the case of molecular ligands is well-established, it

  19. Heavy leptons

    International Nuclear Information System (INIS)

    Smith, C.H.L.

    1977-01-01

    The possibility that a new lepton may exist is discussed under the headings; theoretical reasons for the introduction of heavy leptons, classification of heavy leptons (ortho and paraleptons), discrimination between different types of lepton, decays of charged heavy leptons, production of charged heavy leptons (in e + e - storage rings, neutrino production, photoproduction, and hadroproduction), neutral heavy leptons, and hadroleptons. (U.K.)

  20. Heavy Chain Diseases

    Science.gov (United States)

    ... of heavy chain produced: Alpha Gamma Mu Alpha Heavy Chain Disease Alpha heavy chain disease (IgA heavy ... the disease or lead to a remission. Gamma Heavy Chain Disease Gamma heavy chain disease (IgG heavy ...

  1. Heavy baryons

    International Nuclear Information System (INIS)

    Koerner, J.G.

    1994-06-01

    We review the experimental and theoretical status of baryons containing one heavy quark. The charm and bottom baryon states are classified and their mass spectra are listed. The appropriate theoretical framework for the description of heavy baryons is the Heavy Quark Effective Theory, whose general ideas and methods are introduced and illustrated in specific examples. We present simple covariant expressions for the spin wave functions of heavy baryons including p-wave baryons. The covariant spin wave functions are used to determine the Heavy Quark Symmetry structure of flavour-changing current-induced transitions between heavy baryons as well as one-pion and one-photon transitions between heavy baryons of the same flavour. We discuss 1/m Q corrections to the current-induced transitions as well as the structure of heavy to light baryon transitions. Whenever possible we attempt to present numbers to compare with experiment by making use of further model-dependent assumptions as e.g. the constituent picture for light quarks. We highlight recent advances in the theoretical understanding of the inclusive decays of hadrons containing one heavy quark including polarization. For exclusive semileptonic decays we discuss rates, angular decay distributions and polarization effects. We provide an update of the experimental and theoretical status of lifetimes of heavy baryons and of exclusive nonleptonic two body decays of charm baryons. (orig.)

  2. Heavy flavors

    International Nuclear Information System (INIS)

    Cox, B.; Gilman, F.J.; Gottschalk, T.D.

    1986-11-01

    A range of issues pertaining to heavy flavors at the SSC is examined including heavy flavor production by gluon-gluon fusion and by shower evolution of gluon jets, flavor tagging, reconstruction of Higgs and W bosons, and the study of rare decays and CP violation in the B meson system. A specific detector for doing heavy flavor physics and tuned to this latter study at the SSC, the TASTER, is described. 36 refs., 10 figs

  3. Levels of myosin heavy chain mRNA transcripts and protein isoforms in the fast extensor digitorum longus muscle of 7-month-old rats with chronic thyroid status alterations

    Czech Academy of Sciences Publication Activity Database

    Vadászová, Adriana; Hudecová, S.; Križanová, O.; Soukup, Tomáš

    2006-01-01

    Roč. 55, č. 6 (2006), s. 707-710 ISSN 0862-8408 R&D Projects: GA ČR(CZ) GA304/05/0327 Grant - others:VEGA(SK) 2/4106; NATO(XE) 979876; SAV(SK) APVT-51-027404; MYORES(XE) 511978 Institutional research plan: CEZ:AV0Z50110509 Keywords : myosin heavy chain isoforms * thyroid hormones * muscle differentiation Subject RIV: ED - Physiology Impact factor: 2.093, year: 2006

  4. Accelerators for heavy ion fusion

    International Nuclear Information System (INIS)

    Bangerter, R.O.

    1985-10-01

    Large fusion devices will almost certainly produce net energy. However, a successful commercial fusion energy system must also satisfy important engineering and economic constraints. Inertial confinement fusion power plants driven by multi-stage, heavy-ion accelerators appear capable of meeting these constraints. The reasons behind this promising outlook for heavy-ion fusion are given in this report. This report is based on the transcript of a talk presented at the Symposium on Lasers and Particle Beams for Fusion and Strategic Defense at the University of Rochester on April 17-19, 1985

  5. Heavy flavours

    CERN Document Server

    Buras, Andrzej J

    1998-01-01

    This volume is a collection of review articles on the most outstanding topics in heavy flavour physics. All the authors have made significant contributions to this field. The book reviews in detail the theoretical structure of heavy flavour physics and confronts the Standard Model and some of its extensions with existing experimental data.This new edition covers new trends and ideas and includes the latest experimental information. Compared to the previous edition interesting new activities are included and some of the key contributions are updated. Particular attention is paid to the discover

  6. Heavy quarks

    International Nuclear Information System (INIS)

    Khoze, V.A.

    1983-10-01

    We discuss the results accumulated during the last five years in heavy quark physics and try to draw a simple general picture of the present situation. The survey is based on a unified point of view resulting from quantum chromodynamics. (orig.)

  7. Heavy flavours: theory summary

    OpenAIRE

    Corcella, Gennaro

    2005-01-01

    I summarize the theory talks given in the Heavy Flavours Working Group. In particular, I discuss heavy-flavour parton distribution functions, threshold resummation for heavy-quark production, progress in fragmentation functions, quarkonium production, heavy-meson hadroproduction.

  8. Heavy weights

    International Nuclear Information System (INIS)

    2001-01-01

    The paper mentions the important thing that it was for the country, exporting the first shipping of crude de Castilla to a company of asphalts in United States. It was not a common sale, as those that it carries out the company with the crude of Cusiana or Cano Limon. The new of this shipping is that it was the first successful test of marketing the Colombian heavy crude in the exterior, since previously it was almost considered a curse to find heavy crude by the difficulties of its transport. Today it can be taken to any refinery of the world and the best test is that, after almost a year of efforts to overcome the barriers of the transport, the company achieved its conduction from the Castilla Field, in proximities to Villavicencio, until the Covenas Port, in the Caribbean Colombian coast

  9. The transcriptional landscape

    DEFF Research Database (Denmark)

    Nielsen, Henrik

    2011-01-01

    The application of new and less biased methods to study the transcriptional output from genomes, such as tiling arrays and deep sequencing, has revealed that most of the genome is transcribed and that there is substantial overlap of transcripts derived from the two strands of DNA. In protein coding...... regions, the map of transcripts is very complex due to small transcripts from the flanking ends of the transcription unit, the use of multiple start and stop sites for the main transcript, production of multiple functional RNA molecules from the same primary transcript, and RNA molecules made...... by independent transcription from within the unit. In genomic regions separating those that encode proteins or highly abundant RNA molecules with known function, transcripts are generally of low abundance and short-lived. In most of these cases, it is unclear to what extent a function is related to transcription...

  10. Heavy ions

    CERN Multimedia

    CERN. Geneva; Antinori, Federico

    2001-01-01

    Colliding two heavy nuclei at ultrarelativistic energies allows to create in the laboratory a bulk system with huge density, pressure and temperature and to study its properties. It is estimated that in Pb-Pb collisions at CERN-SPS we reach over an appreciable volume an energy density which exceeds by more than a factor 20 that of normal nuclear matter. At such densities, the hadrons are so closely packed that they interpenetrate; novel physics phenomena are expected to appear. QCD predicts that under such conditions a phase transition from a system composed of colourless hadrons to a Quark-Gluon Plasma (QGP) should occur. A rich ultrarelativistic heavy-ion physics programme is under way both at BNL-AGS and at CERN-SPS since 1986. The results obtained so far have led CERN to officially announce evidence for a new state of matter last year. A long-range programme of heavy-ion physics at higher energies is under way (BNL-RHIC) and in preparation (CERN-LHC). These lectures are meant as an introduction to the phy...

  11. Heavy ions

    CERN Multimedia

    CERN. Geneva. Audiovisual Unit

    2002-01-01

    Colliding two heavy nuclei at ultrarelativistic energies allows to create in the laboratory a bulk system with huge density, pressure and temperature and to study its properties. It is estimated that in Pb-Pb collisions at CERN-SPS we reach over an appreciable volume an energy density which exceeds by more than a factor 20 that of normal nuclear matter. At such densities, the hadrons are so closely packed that they interpenetrate; novel physics phenomena are expected to appear. QCD predicts that under such conditions a phase transition from a system composed of colourless hadrons to a Quark-Gluon Plasma (QGP) should occur. A rich ultrarelativistic heavy-ion physics programme is under way both at BNL-AGS and at CERN-SPS since 1986. The results obtained so far have led CERN to officially announce evidence for a new state of matter last year. A long-range programme of heavy-ion physics at higher energies is under way (BNL-RHIC) and in preparation (CERN-LHC). These lectures are meant as an introduction to the phy...

  12. Heavy quark effective theory and heavy baryon transitions

    International Nuclear Information System (INIS)

    Hussain, F.

    1992-01-01

    The heavy quark effective theory (HQET) is applied to study the weak decay of heavy mesons and heavy baryons and to predict the form factors for heavy to heavy and heavy to light transitions. 28 refs, 10 figs, 2 tabs

  13. Heavy Menstrual Bleeding (Menorrhagia)

    Science.gov (United States)

    ... Us Information For… Media Policy Makers Blood Disorders Heavy Menstrual Bleeding Recommend on Facebook Tweet Share Compartir ... It can also be bleeding that is very heavy. How do you know if you have heavy ...

  14. Heavy flavour in ALICE

    CERN Document Server

    Pillot, Philippe

    2008-01-01

    Open heavy flavours and heavy quarkonium states are expected to provide essential informa- tion on the properties of the strongly interacting system fo rmed in the early stages of heavy-ion collisions at very high energy density. Such probes are espe cially promising at LHC energies where heavy quarks (both c and b) are copiously produced. The ALICE detector shall measure the production of open heavy flavours and heavy quarkonium st ates in both proton-proton and heavy-ion collisions at the LHC. The expected performances of ALICE for heavy flavour physics is discussed based on the results of simulation studies on a s election of benchmark channels

  15. Transcriptional regulation by competing transcription factor modules.

    Directory of Open Access Journals (Sweden)

    Rutger Hermsen

    2006-12-01

    Full Text Available Gene regulatory networks lie at the heart of cellular computation. In these networks, intracellular and extracellular signals are integrated by transcription factors, which control the expression of transcription units by binding to cis-regulatory regions on the DNA. The designs of both eukaryotic and prokaryotic cis-regulatory regions are usually highly complex. They frequently consist of both repetitive and overlapping transcription factor binding sites. To unravel the design principles of these promoter architectures, we have designed in silico prokaryotic transcriptional logic gates with predefined input-output relations using an evolutionary algorithm. The resulting cis-regulatory designs are often composed of modules that consist of tandem arrays of binding sites to which the transcription factors bind cooperatively. Moreover, these modules often overlap with each other, leading to competition between them. Our analysis thus identifies a new signal integration motif that is based upon the interplay between intramodular cooperativity and intermodular competition. We show that this signal integration mechanism drastically enhances the capacity of cis-regulatory domains to integrate signals. Our results provide a possible explanation for the complexity of promoter architectures and could be used for the rational design of synthetic gene circuits.

  16. WRKY transcription factors

    Science.gov (United States)

    Bakshi, Madhunita; Oelmüller, Ralf

    2014-01-01

    WRKY transcription factors are one of the largest families of transcriptional regulators found exclusively in plants. They have diverse biological functions in plant disease resistance, abiotic stress responses, nutrient deprivation, senescence, seed and trichome development, embryogenesis, as well as additional developmental and hormone-controlled processes. WRKYs can act as transcriptional activators or repressors, in various homo- and heterodimer combinations. Here we review recent progress on the function of WRKY transcription factors in Arabidopsis and other plant species such as rice, potato, and parsley, with a special focus on abiotic, developmental, and hormone-regulated processes. PMID:24492469

  17. Heavy metal jako subkultura

    OpenAIRE

    KOUTNÁ, Daniela

    2016-01-01

    This bachelor thesis deals with heavy metal subculture. Its aim is to introduce the most important branches and to show broadness of heavy metal. This bachelor thesis describes development and history, briefly shows Czech heavy metal history alongside with the biggest and most popular Czech heavy metal festivals. It shows the most dressing concerns of society against this style.

  18. Structural Basis of Mitochondrial Transcription Initiation.

    Science.gov (United States)

    Hillen, Hauke S; Morozov, Yaroslav I; Sarfallah, Azadeh; Temiakov, Dmitry; Cramer, Patrick

    2017-11-16

    Transcription in human mitochondria is driven by a single-subunit, factor-dependent RNA polymerase (mtRNAP). Despite its critical role in both expression and replication of the mitochondrial genome, transcription initiation by mtRNAP remains poorly understood. Here, we report crystal structures of human mitochondrial transcription initiation complexes assembled on both light and heavy strand promoters. The structures reveal how transcription factors TFAM and TFB2M assist mtRNAP to achieve promoter-dependent initiation. TFAM tethers the N-terminal region of mtRNAP to recruit the polymerase to the promoter whereas TFB2M induces structural changes in mtRNAP to enable promoter opening and trapping of the DNA non-template strand. Structural comparisons demonstrate that the initiation mechanism in mitochondria is distinct from that in the well-studied nuclear, bacterial, or bacteriophage transcription systems but that similarities are found on the topological and conceptual level. These results provide a framework for studying the regulation of gene expression and DNA replication in mitochondria. Copyright © 2017 Elsevier Inc. All rights reserved.

  19. Deuterium and heavy water

    International Nuclear Information System (INIS)

    Vasaru, G.; Ursu, D.; Mihaila, A.; Szentgyorgyi, P.

    1975-01-01

    This bibliography on deuterium and heavy water contains 3763 references (1932-1974) from 43 sources of information. An author index and a subject index are given. The latter contains a list of 136 subjects, arranged in 13 main topics: abundance of deuterium , catalysts, catalytic exchange, chemical equilibria, chemical kinetics, deuterium and heavy water analysis, deuterium and heavy water properties, deuterium and heavy water separation, exchange reactions, general review, heavy water as moderator, isotope effects, synthesis of deuterium compounds

  20. A heavy load for heavy ions

    CERN Multimedia

    2003-01-01

    On 25 September, the two large coils for the dipole magnet of ALICE, the LHC experiment dedicated to heavy ions, arrived at Point 2 on two heavy load trucks after a 1200 km journey from their assembly in Vannes, France.

  1. The Transcription Factor Encyclopedia

    DEFF Research Database (Denmark)

    Yusuf, Dimas; Butland, Stefanie L; Swanson, Magdalena I

    2012-01-01

    mini review articles on pertinent human, mouse and rat TFs. Notable features of the TFe website include a high-quality PDF generator and web API for programmatic data retrieval. TFe aims to rapidly educate scientists about the TFs they encounter through the delivery of succinct summaries written......ABSTRACT: Here we present the Transcription Factor Encyclopedia (TFe), a new web-based compendium of mini review articles on transcription factors (TFs) that is founded on the principles of open access and collaboration. Our consortium of over 100 researchers has collectively contributed over 130...

  2. Soil heavy metals

    Energy Technology Data Exchange (ETDEWEB)

    Sherameti, Irena [Jena Univ. (Germany). Inst. fuer Allgemeine Botanik und Pflanzenphysiologie; Varma, Ajit (eds.) [Amity Univ., Uttar Pradesh (India). Amity Inst. of Microbial Technology; Amity Science, Technology and Innovation Foundation, Noida, UP (India)

    2010-07-01

    Human activities have dramatically changed the composition and organisation of soils. Industrial and urban wastes, agricultural application and also mining activities resulted in an increased concentration of heavy metals in soils. How plants and soil microorganisms cope with this situation and the sophisticated techniques developed for survival in contaminated soils is discussed in this volume. The topics presented include: the general role of heavy metals in biological soil systems; the relation of inorganic and organic pollutions; heavy metal, salt tolerance and combined effects with salinity; effects on abuscular mycorrhizal and on saprophytic soil fungi; heavy metal resistance by streptomycetes; trace element determination of environmental samples; the use of microbiological communities as indicators; phytostabilization of lead polluted sites by native plants; effects of soil earthworms on removal of heavy metals and the remediation of heavy metal contaminated tropical land. (orig.)

  3. Basal transcription machinery

    Indian Academy of Sciences (India)

    2007-03-29

    Mar 29, 2007 ... The holoenzyme of prokaryotic RNA polymerase consists of the core enzyme, made of two , , ' and subunits, which lacks promoter selectivity and a sigma () subunit which enables the core enzyme to initiate transcription in a promoter dependent fashion. A stress sigma factor s, in prokaryotes ...

  4. Machine Dictation and Transcription.

    Science.gov (United States)

    Harvey, Evelyn; And Others

    This instructional package contains both an instructor's manual and a student's manual for a course in machine dictation and transcription. The instructor's manual contains an overview with tips on teaching the course, letters for dictation, and a key to the letters. The student's manual contains an overview of the course and of the skills needed…

  5. Transcriptional Regulation in Haematopoiesis:

    DEFF Research Database (Denmark)

    Lauridsen, Felicia K B

    with the capacity to both self-renew and differentiate. This thesis is built upon two studies, which investigate two different aspects of the haematopoietic system; heterogeneity within the HSC compartment (presented in manuscript I), and the interplay between transcription factors controlling granulocyte/ monocyte...

  6. Heavy-ion targets

    International Nuclear Information System (INIS)

    Adair, H.L.; Kobisk, E.H.

    1985-01-01

    This chapter examines the characteristics of targets required in heavy-ion accelerator physics experiments. The effects of target parameters on heavy-ion experimental results are reviewed. The target fabrication and characterization techniques used to minimize experimental problems during heavy-ion bombardment are described. Topics considered include target thickness and uniformity, target lifetime, target purity, substrate materials, Doppler shift effects, metal preparations, and target preparation methods

  7. Heavy quark masses

    Science.gov (United States)

    Testa, Massimo

    1990-01-01

    In the large quark mass limit, an argument which identifies the mass of the heavy-light pseudoscalar or scalar bound state with the renormalized mass of the heavy quark is given. The following equation is discussed: m(sub Q) = m(sub B), where m(sub Q) and m(sub B) are respectively the mass of the heavy quark and the mass of the pseudoscalar bound state.

  8. Heavy quark effective theory and study of heavy hadron spectra

    International Nuclear Information System (INIS)

    Dong Yubing

    1995-01-01

    By employing the heavy quark effective theory, the spectra of heavy hadrons, such as heavy mesons (Q-barq), heavy baryons (QQq and Qqq) and heavy multiquark systems (Q-barQ-barqq) are studied systemically. The results are compared with the predictions for Q-barQ-barqq in potential model

  9. Heavy baryon transitions and the heavy quark effective theory

    International Nuclear Information System (INIS)

    Hussain, F.

    1992-01-01

    Heavy baryon decays are studied in the context of the Bethe-Salpeter approach to the heavy quark effective theory. A drastic reduction, in the number of independent form factors, is found. Results are presented both for heavy to heavy and heavy to light baryon decays. (orig.)

  10. Heavy ion physics

    International Nuclear Information System (INIS)

    Kalpakchieva, R.; Cherepanov, E.A.

    1993-01-01

    The international school-seminar on heavy ion physics had been organized in Dubna in may of 1993. The scientific program of reports covers the following main topics: synthesis and properties of heavy nuclei; synthesis and investigation of properties of exotic nuclei; experiments with radioactive nuclear beams; interaction between complex nuclei at low and intermediate energies. It also includes reports on laser spectroscopy and exotic nuclear beams, on some application of heavy ion beams for the problems of solid state physics, on construction of multidetector facilities and on developing of heavy ion accelerator complexes. Short communication

  11. Heavy-ion radiography

    International Nuclear Information System (INIS)

    Fabrikant, J.I.; Tobias, C.A.; Holley, W.R.; Benton, E.V.; Woodruff, K.H.; MacFarland, E.W.

    1983-01-01

    High energy, heavy-ion beams offer superior discrimination of tissue electron densities at very low radiation doses. This characteristic has potential for diagnostic medical imaging of neoplasms arising in the soft tissues and organs because it can detect smaller inhomogeneities than x rays. Heavy-ion imaging may also increase the accuracy of cancer radiotherapy planning involving use of accelerated charged particles. In the current physics research program of passive heavy-ion imaging, critical modulation transfer function tests are being carried out in heavy-ion projection radiography and heavy-ion computerized tomography. The research goal is to improve the heavy-ion imaging method until it reaches the limits of its theoretical resolution defined by range straggling, multiple scattering, and other factors involved in the beam quality characteristics. Clinical uses of the imaging method include the application of heavy-ion computerized tomography to heavy-ion radiotherapy planning, to the study of brain tumors and other structures of the head, and to low-dose heavy-ion projection mammography, particularly for women with dense breasts where other methods of diagnosis fail. The ions used are primarily 300 to 570 MeV/amu carbon and neon ions accelerated at the Lawrence Berkeley Laboratory Bevalac

  12. Production of heavy water

    Science.gov (United States)

    Spencer, Larry S.; Brown, Sam W.; Phillips, Michael R.

    2017-06-06

    Disclosed are methods and apparatuses for producing heavy water. In one embodiment, a catalyst is treated with high purity air or a mixture of gaseous nitrogen and oxygen with gaseous deuterium all together flowing over the catalyst to produce the heavy water. In an alternate embodiment, the deuterium is combusted to form the heavy water. In an alternate embodiment, gaseous deuterium and gaseous oxygen is flowed into a fuel cell to produce the heavy water. In various embodiments, the deuterium may be produced by a thermal decomposition and distillation process that involves heating solid lithium deuteride to form liquid lithium deuteride and then extracting the gaseous deuterium from the liquid lithium deuteride.

  13. DNA Topoisomerases in Transcription

    DEFF Research Database (Denmark)

    Rødgaard, Morten Terpager

    2015-01-01

    This Ph.D. thesis summarizes the main results of my studies on the interplay between DNA topoisomerases and transcription. The work was performed from 2011 to 2015 at Aarhus University in the Laboratory of Genome Research, and was supervised by associate professor Anni H. Andersen. Most of the ex......This Ph.D. thesis summarizes the main results of my studies on the interplay between DNA topoisomerases and transcription. The work was performed from 2011 to 2015 at Aarhus University in the Laboratory of Genome Research, and was supervised by associate professor Anni H. Andersen. Most...... topoisomerase-DNA cleavage complex. The second study is an investigation of how topoisomerases influence gene regulation by keeping the genome in an optimal topological state....

  14. Deciphering Transcriptional Regulation

    DEFF Research Database (Denmark)

    Valen, Eivind

    The myriad of cells in the human body are all made from the same blueprint: the human genome. At the heart of this diversity lies the concept of gene regulation, the process in which it is decided which genes are used where and when. Genes do not function as on/off buttons, but more like a volume...... mostly near the start of the gene known as the promoter. This region contains patterns scattered in the DNA that the TFs can recognize and bind to. Such binding can prompt the assembly of the pre-initiation complex which ultimately leads to transcription of the gene. In order to achieve the regulation...... on what characterizes a hippocampus promoter. Pairing CAGE with TF binding site prediction we identi¿ed a likely key regulator of hippocampus. Finally, we developed a method for CAGE exploration. While the DeepCAGE library characterized a full 1.4 million transcription initiation events it did not capture...

  15. Heavy-Quark Production

    CERN Document Server

    Frixione, Stefano; Nason, Paolo; Ridolfi, Giovanni

    1997-01-01

    We review the present theoretical and experimental status of heavy quark production in high-energy collisions. In particular, we cover hadro- and photoproduction at fixed target experiments, at HERA and at the hadron colliders, as well as aspects of heavy quark production in e+e- collisions at the Z0 peak.

  16. Canadian heavy water production

    International Nuclear Information System (INIS)

    Dahlinger, A.; Lockerby, W.E.; Rae, H.K.

    1977-05-01

    The paper reviews Canadian experience in the production of heavy water, presents a long-term supply projection, relates this projection to the anticipated long-term electrical energy demand, and highlights principal areas for further improvement that form the bulk of our research and development program on heavy water processes

  17. Heavy ion fusion

    International Nuclear Information System (INIS)

    Bangerter, R.O.

    1986-01-01

    This report on the International Symposium on Heavy Ion Fusion held May 27-29, 1986 summarizes the problems and achievements in the areas of targets, accelerators, focussing, reactor studies, and system studies. The symposium participants recognize that there are large uncertainties in Heavy Ion Fusion but many of them are also optimistic that HIF may ultimately be the best approach to fusion

  18. Heavy water and nonproliferation

    International Nuclear Information System (INIS)

    Miller, M.M.

    1980-05-01

    This report begins with a historical sketch of heavy water. The report next assesses the nonproliferation implications of the use of heavy water-moderated power reactors; several different reactor types are discussed, but the focus is on the natural uranium, on-power fueled, pressure tube reactor CANDU. The need for and development of on-power fueling safeguards is discussed. Also considered is the use of heavy water in plutonium production reactors as well as the broader issue of the relative nuclear leverage that suppliers can bring to bear on countries with natural uranium-fueled reactors as compared to those using enriched designs. The final chapter reviews heavy water production methods and analyzes the difficulties involved in implementing these on both a large and a small scale. It concludes with an overview of proprietary and nonproliferation constraints on heavy water technology transfer

  19. Transcriptional networks controlling adipocyte differentiation

    DEFF Research Database (Denmark)

    Siersbæk, R; Mandrup, Susanne

    2011-01-01

    " of the transcription factor networks operating at specific time points during adipogenesis. Using such global "snapshots," we have demonstrated that dramatic remodeling of the chromatin template occurs within the first few hours following adipogenic stimulation and that many of the early transcription factors bind...... in a cooperative fashion to transcription factor hotspots. Such hotspots are likely to represent key chromatin nodes, where many adipogenic signaling pathways converge to drive the adipogenic transcriptional reprogramming....

  20. Heavy-ion dosimetry

    International Nuclear Information System (INIS)

    Schimmerling, W.

    1980-03-01

    This lecture deals with some of the more important physical characteristics of relativistic heavy ions and their measurement, with beam delivery and beam monitoring, and with conventional radiation dosimetry as used in the operation of the BEVALAC biomedical facility for high energy heavy ions (Lyman and Howard, 1977; BEVALAC, 1977). Even so, many fundamental aspects of the interaction of relativistic heavy ions with matter, including important atomic physics and radiation chemical considerations, are not discussed beyond the reminder that such additional understanding is required before an adequte perspective of the problem can be attained

  1. Phenomenology of heavy leptons and heavy quarks

    International Nuclear Information System (INIS)

    Gilman, F.J.

    1978-11-01

    The review of the quark and lepton family includes properties of the tau, SU(2) x U(1) classification of the tau and its decays, heavier leptons, the spectroscopy of heavy hadrons composed of quarks, their strong and electromagnetic decays, the weak interaction properties of the c, b, and t quarks, and the decays of hadrons containing them expected within the context of the standard SU(2) x U(1) model. 76 references

  2. Heavy Flavour Production

    CERN Document Server

    Nason, Paolo; Ridolfi, Giovanni

    1995-01-01

    We review the status of heavy flavour production in QCD. Comparison of experimental and theoretical results for top and bottom production are given. Selected topics in charm production are also discussed.

  3. Heavy element research

    International Nuclear Information System (INIS)

    Anon.

    1976-01-01

    Heavy element research activities in metallurgy and ceramics during 1976 at Lawrence Berkeley Laboratory are reviewed. Topics include: microstructure, properties and alloy design; ceramic alloy program; high resolution and high voltage electron microscopy; and powder metallurgy

  4. Heavy rain effects

    Science.gov (United States)

    Dunham, R. Earl, Jr.

    1994-01-01

    This paper summarizes the current state of knowledge of the effect of heavy rain on airplane performance. Although the effects of heavy rain on airplane systems and engines are generally known, only recently has the potential aerodynamic effect of heavy rain been recognized. In 1977 the United States Federal Aviation Administration (FAA) conducted a study of 25 aircraft accidents and incidents which occurred between 1964 and 1976 in which low-altitude wind shear could have been a contributing factor. Of the 25 cases (23 approach or landing and 2 take-off) in the study, ten cases had occurred in a rain environment, and in five cases these were classified as intense or heavy rain encounters. These results led to the reconsideration of high-intensity, short-duration rainfall as a potential weather-related aircraft safety hazard, particularly in the take-off and/or approach phases of flight.

  5. Heavy ion accelerators

    International Nuclear Information System (INIS)

    Schmelzer, C.

    1974-01-01

    This review of the present state of work on heavy-ion accelerators pays particular attention to the requirements for nuclear research. It is divided into the following sections: single-particle versus collective acceleration, heavy-ion accelerators, beam quality, and a status report on the UNILAC facility. Among the topics considered are the recycling cyclotron, linacs with superconducting resonators, and acceleration to the GeV/nucleon range. (8 figures, 2 tables) (U.S.)

  6. Transcript structure and domain display: a customizable transcript visualization tool.

    Science.gov (United States)

    Watanabe, Kenneth A; Ma, Kaiwang; Homayouni, Arielle; Rushton, Paul J; Shen, Qingxi J

    2016-07-01

    Transcript Structure and Domain Display (TSDD) is a publicly available, web-based program that provides publication quality images of transcript structures and domains. TSDD is capable of producing transcript structures from GFF/GFF3 and BED files. Alternatively, the GFF files of several model organisms have been pre-loaded so that users only needs to enter the locus IDs of the transcripts to be displayed. Visualization of transcripts provides many benefits to researchers, ranging from evolutionary analysis of DNA-binding domains to predictive function modeling. TSDD is freely available for non-commercial users at http://shenlab.sols.unlv.edu/shenlab/software/TSD/transcript_display.html : jeffery.shen@unlv.nevada.edu. © The Author 2016. Published by Oxford University Press. All rights reserved. For Permissions, please e-mail: journals.permissions@oup.com.

  7. Heavy oils clean up

    International Nuclear Information System (INIS)

    Collitt, R.

    1997-01-01

    High production, transport and refining costs have long led oil companies to shun heavy crude oils. Advances in the technology of upgrading heavy oils, however, are likely to reduce transport costs and improve the refinery output. Research and development by Venezuela's state oil company, Petroleos de Venezuela (PDVSA), has resulted in a process called Aquaconversion which permits the upgrading of heavy crude oils using a catalyst and the hydrogen from steam. This may be carried out at the wellhead in small low-pressure and relatively inexpensive units. In addition, higher distillate yields of higher value could be produced by revamping the thermal cracking units of refineries to incorporate the new technology. This has generated considerable interest in Venezuela's large extra-heavy crude oil reserves and has led multinational oil companies along with PDVSA to pledge $17 billion to their development. Even at a $2 to $3 per barrel upgrading cost, Venezuela's extra heavy crudes are competitive with lighter oils from other countries. Other major markets for the new technology are likely to be China and Russia, given their own large heavy crude reserves. (UK)

  8. Process for removing heavy metal compounds from heavy crude oil

    Science.gov (United States)

    Cha, Chang Y.; Boysen, John E.; Branthaver, Jan F.

    1991-01-01

    A process is provided for removing heavy metal compounds from heavy crude oil by mixing the heavy crude oil with tar sand; preheating the mixture to a temperature of about 650.degree. F.; heating said mixture to up to 800.degree. F.; and separating tar sand from the light oils formed during said heating. The heavy metals removed from the heavy oils can be recovered from the spent sand for other uses.

  9. Nucleocytoplasmic shuttling of transcription factors

    DEFF Research Database (Denmark)

    Cartwright, P; Helin, K

    2000-01-01

    To elicit the transcriptional response following intra- or extracellular stimuli, the signals need to be transmitted to their site of action within the nucleus. The nucleocytoplasmic shuttling of transcription factors is a mechanism mediating this process. The activation and inactivation...... of the transcriptional response is essential for cells to progress through the cell cycle in a normal manner. The involvement of cytoplasmic and nuclear accessory molecules, and the general nuclear membrane transport components, are essential for this process. Although nuclear import and export for different...... transcription factor families are regulated by similar mechanisms, there are several differences that allow for the specific activation of each transcription factor. This review discusses the general import and export pathways found to be common amongst many different transcription factors, and highlights...

  10. Transcriptional Silencing of Retroviral Vectors

    DEFF Research Database (Denmark)

    Lund, Anders Henrik; Duch, M.; Pedersen, F.S.

    1996-01-01

    . Extinction of long-term vector expression has been observed after implantation of transduced hematopoietic cells as well as fibroblasts, myoblasts and hepatocytes. Here we review the influence of vector structure, integration site and cell type on transcriptional silencing. While down-regulation of proviral...... transcription is known from a number of cellular and animal models, major insight has been gained from studies in the germ line and embryonal cells of the mouse. Key elements for the transfer and expression of retroviral vectors, such as the viral transcriptional enhancer and the binding site for the t......RNA primer for reverse transcription may have a major influence on transcriptional silencing. Alterations of these elements of the vector backbone as well as the use of internal promoter elements from housekeeping genes may contribute to reduce transcriptional silencing. The use of cell culture and animal...

  11. DNA topology and transcription

    Science.gov (United States)

    Kouzine, Fedor; Levens, David; Baranello, Laura

    2014-01-01

    Chromatin is a complex assembly that compacts DNA inside the nucleus while providing the necessary level of accessibility to regulatory factors conscripted by cellular signaling systems. In this superstructure, DNA is the subject of mechanical forces applied by variety of molecular motors. Rather than being a rigid stick, DNA possesses dynamic structural variability that could be harnessed during critical steps of genome functioning. The strong relationship between DNA structure and key genomic processes necessitates the study of physical constrains acting on the double helix. Here we provide insight into the source, dynamics, and biology of DNA topological domains in the eukaryotic cells and summarize their possible involvement in gene transcription. We emphasize recent studies that might inspire and impact future experiments on the involvement of DNA topology in cellular functions. PMID:24755522

  12. Eukaryotic transcription factors

    DEFF Research Database (Denmark)

    Staby, Lasse; O'Shea, Charlotte; Willemoës, Martin

    2017-01-01

    Gene-specific transcription factors (TFs) are key regulatory components of signaling pathways, controlling, for example, cell growth, development, and stress responses. Their biological functions are determined by their molecular structures, as exemplified by their structured DNA-binding domains...... regions with function-related, short sequence motifs and molecular recognition features with structural propensities. This review focuses on molecular aspects of TFs, which represent paradigms of ID-related features. Through specific examples, we review how the ID-associated flexibility of TFs enables....... It is furthermore emphasized how classic biochemical concepts like allostery, conformational selection, induced fit, and feedback regulation are undergoing a revival with the appreciation of ID. The review also describes the most recent advances based on computational simulations of ID-based interaction mechanisms...

  13. Heavy-ion radiography

    International Nuclear Information System (INIS)

    Fabrikant, J.I.; Tobias, C.A.; Holley, W.R.; Benton, E.V.

    1981-01-01

    Heavy-particle radiography has clinical potential as a newly developed noninvasive low-dose imaging procedure that provides increased resolution of minute density differences in soft tissues of the body. The method utilizes accelerated high-energy ions, primarily carbon and neon, at the Bevalac accelerator at the Lawrence Berkeley Laboratory. The research program for medicine utilizes heavy-ion radiography for low-dose mammography, for treatment planning for cancer patients, and for imaging and accurate densitometry of skeletal structures, brain and spinal neoplasms, and the heart. The potential of heavy-ion imaging, and particularly reconstruction tomography, is now proving to be an adjunct to existing diagnostic imaging procedures in medicine, both for applications to the diagnosis, management and treatment of clinical cancer in man, and for the early detection of small soft-tissue tumors at low radiation dose

  14. Very heavy dark Skyrmions

    International Nuclear Information System (INIS)

    Dick, Rainer

    2017-01-01

    A dark sector with a solitonic component provides a means to circumvent the problem of generically low annihilation cross sections of very heavy dark matter particles. At the same time, enhanced annihilation cross sections are necessary for indirect detection of very heavy dark matter components beyond 100 TeV. Non-thermally produced dark matter in this mass range could therefore contribute to the cosmic γ-ray and neutrino flux above 100 TeV, and massive Skyrmions provide an interesting framework for the discussion of these scenarios. Therefore a Higgs portal and a neutrino portal for very heavy Skyrmion dark matter are discussed. The Higgs portal model demonstrates a dark mediator bottleneck, where limitations on particle annihilation cross sections will prevent a signal from the potentially large soliton annihilation cross sections. This problem can be avoided in models where the dark mediator decays. This is illustrated by the neutrino portal for Skyrmion dark matter. (orig.)

  15. Heavy-Load Lifting

    DEFF Research Database (Denmark)

    Bloomquist, Kira; Oturai, Peter; Steele, Megan L

    2018-01-01

    of the Creative Commons Attribution-Non Commercial-No Derivatives License 4.0 (CCBY-NC-ND), where it is permissible to download and share the work provided it is properly cited. The work cannot be changed in any way or used commercially without permission from the journal....... repetition maximum (RM), two sets of 15-20 repetitions) and heavy-load (85-90% 1RM, three sets of 5-8 repetition) upper-extremity resistance exercise separated by a one-week wash-out period. Swelling was determined by bioimpedance spectroscopy and dual energy x-ray absorptiometry, with breast cancer......-related lymphedema symptoms (heaviness, swelling, pain, tightness) reported using a numeric rating scale (0-10). Order of low- versus heavy-load was randomized. All outcomes were assessed pre-, immediately post-, and 24- and 72-hours post-exercise. Generalized estimating equations were used to evaluate changes over...

  16. Very heavy dark Skyrmions

    Energy Technology Data Exchange (ETDEWEB)

    Dick, Rainer [University of Saskatchewan, Department of Physics and Engineering Physics, Saskatoon, SK (Canada)

    2017-12-15

    A dark sector with a solitonic component provides a means to circumvent the problem of generically low annihilation cross sections of very heavy dark matter particles. At the same time, enhanced annihilation cross sections are necessary for indirect detection of very heavy dark matter components beyond 100 TeV. Non-thermally produced dark matter in this mass range could therefore contribute to the cosmic γ-ray and neutrino flux above 100 TeV, and massive Skyrmions provide an interesting framework for the discussion of these scenarios. Therefore a Higgs portal and a neutrino portal for very heavy Skyrmion dark matter are discussed. The Higgs portal model demonstrates a dark mediator bottleneck, where limitations on particle annihilation cross sections will prevent a signal from the potentially large soliton annihilation cross sections. This problem can be avoided in models where the dark mediator decays. This is illustrated by the neutrino portal for Skyrmion dark matter. (orig.)

  17. Heavy fermion materials

    International Nuclear Information System (INIS)

    Smith, J.L.; Cooke, D.W.

    1986-01-01

    The heavy-fermion ground state occurs in a few select metallic compounds as a result of interactions between f-electron and conduction-electron spins. A characteristically large electronic heat capacity at low temperature indicates that the effective electron mass of these materials is more than two orders of magnitude greater than that expected for a free-electron metal. This heavy-fermion ground state can become superconducting or antiferromagnetic, exhibiting very unusual properties. These materials and the role of muon spin rotation in their study are briefly discussed

  18. [Relativistic heavy ion research

    International Nuclear Information System (INIS)

    1990-01-01

    At Brookhaven National Laboratory, participation in the E802 Experiment, which is the first major heavy-ion experiment at the BNL-AGS, was the main focus of the group during the past four years. The emphases of the E802 experiment were on (a) accurate particle identification and measurements of spectra over a wide kinematical domain (5 degree LAB < 55 degree, p < 20 GeV/c); and (b) measurements of small-angle two-particle correlations, with event characterization tools: multiplicity array, forward and large-angle calorimeters. This experiment and other heavy ion collision experiments are discussed in this report

  19. Search for heavy particles

    International Nuclear Information System (INIS)

    Barnett, R.M.

    1977-03-01

    Direct and indirect evidence for the existence of a new heavy quark b and of new heavy neutral leptons N/sub e/ and N/sub μ/ can be sought in neutrino and e + e - scattering. These particles are expected to have right-handed currents. Discussion is given on the characteristics, production and decay of hadrons such as bb, ub and db, and of the massive neutral leptons. Muon number violation with and without N/sub e/ and N/sub μ/ is considered

  20. Heavy ion collisions

    International Nuclear Information System (INIS)

    Jacak, B.V.

    1994-01-01

    Heavy ion collisions at very high energies provide an opportunity to recreate in the laboratory the conditions which existed very early in the universe, just after the big bang. We prepare matter at very high energy density and search for evidence that the quarks and gluons are deconfined. I describe the kinds of observables that are experimentally accessible to characterize the system and to search for evidence of new physics. A wealth of information is now available from CERN and BNL heavy ion experiments. I discuss recent results on two particle correlations, strangeness production, and dilepton and direct photon distributions

  1. High-Frequency Promoter Firing Links THO Complex Function to Heavy Chromatin Formation

    DEFF Research Database (Denmark)

    Mouaikel, John; Causse, Sébastien Z; Rougemaille, Mathieu

    2013-01-01

    The THO complex is involved in transcription, genome stability, and messenger ribonucleoprotein (mRNP) formation, but its precise molecular function remains enigmatic. Under heat shock conditions, THO mutants accumulate large protein-DNA complexes that alter the chromatin density of target genes...... (heavy chromatin), defining a specific biochemical facet of THO function and a powerful tool of analysis. Here, we show that heavy chromatin distribution is dictated by gene boundaries and that the gene promoter is necessary and sufficient to convey THO sensitivity in these conditions. Single......-molecule fluorescence insitu hybridization measurements show that heavy chromatin formation correlates with an unusually high firing pace of the promoter with more than 20 transcription events per minute. Heavy chromatin formation closely follows the modulation of promoter firing and strongly correlates with polymerase...

  2. Heavy baryons in the heavy quark effective theory

    International Nuclear Information System (INIS)

    Koerner, J.G.; Thompson, G.

    1991-10-01

    We give a mini-review of recent results on current-induced transitions between heavy baryons (and between heavy and light baryons) in the light of the new spin and flavour symmetries of the Heavy Quark Effective Theory (HQET). We discuss the structure of the 1/m corrections to the heavy mass limit and outline a diagrammatic proof that there are no 0(1/m) correction to the Voloshin-Shifman normalization condition at zero recoil. (orig.)

  3. Heavy ion accelerator GANIL

    International Nuclear Information System (INIS)

    1975-04-01

    This article presents GANIL, a large national heavy ion accelerator. The broad problems of nuclear physics, atomic physics, astrophysics and physics of condensed media which can be approached and studied with this machine are discussed first, after which the final construction project is described. The project comprises a circular injector, a separated sector cyclotron up beam stripper, and a second separated cyclotron downstream [fr

  4. Heavy liquid bubble chamber

    CERN Multimedia

    CERN PhotoLab

    1965-01-01

    The CERN Heavy liquid bubble chamber being installed in the north experimental hall at the PS. On the left, the 1180 litre body; in the centre the magnet, which can produce a field of 26 800 gauss; on the right the expansion mechanism.

  5. Heavy quarks photoproduction

    International Nuclear Information System (INIS)

    Cacciari, M.

    1996-08-01

    The state of the art of the theoretical calculations for heavy quarks photoproduction is reviewed. The full next-to-leading order calculation and two possible resummations, the high energy one for total cross sections and the large p T one for differential cross sections, are described. (orig.)

  6. Bioaccumulation of Heavy Metals

    African Journals Online (AJOL)

    komla

    acute toxicity and sublethal chronic action the devastating effects that the accumulation - including ... the laboratory and kept in holding glass (a) Copper as CuSO,.5H,0 ... from 2 psu to 21 psu) depending on time of The choice of heavy metals for this s year. ... serving as substrate and food source for Salinity of test media.

  7. Heavy-ion microscopy

    International Nuclear Information System (INIS)

    Kraft, G.; Yang, T.C.H.; Richards, T.; Tobias, C.A.

    1980-01-01

    This chapter briefly describes the techniques of optical microscopy, scanning and transmission electron microscopy, soft x-ray microscopy and compares these latter techniques with heavy-ion microscopy. The resolution obtained with these various types of microscopy are compared and the influence of the etching procedure on total resolution is discussed. Several micrographs of mammalian cells are included

  8. Heavy chain only antibodies

    DEFF Research Database (Denmark)

    Moghimi, Seyed Moein; Rahbarizadeh, Fatemeh; Ahmadvand, Davoud

    2013-01-01

    Unlike conventional antibodies, heavy chain only antibodies derived from camel contain a single variable domain (VHH) and two constant domains (CH2 and CH3). Cloned and isolated VHHs possess unique properties that enable them to excel conventional therapeutic antibodies and their smaller antigen...

  9. Relativisitic heavy ion collisions

    International Nuclear Information System (INIS)

    Tannenbaum, M.J.

    1987-01-01

    Some of the objectives and observables of Relativistic Heavy Ion Physics are presented. The first experimental results from oxygen interactions at CERN, 200 GeV/c per nucleon, and BNL, 14.5 GeV/c per nucleon are shown. The data indicate more energy emission than was originally predicted. 25 refs., 19 figs

  10. Heavy-ion radiography and heavy-ion computed tomography

    International Nuclear Information System (INIS)

    Fabrikant, J.I.; Holley, W.R.; McFarland, E.W.; Tobias, C.a.

    1982-02-01

    Heavy-ion projection and CT radiography is being developed into a safe, low-dose, noninvasive radiological procedure that can quantitate and image small density differences in human tissues. The applications to heavy-ion mammography and heavy-ion CT imaging of the brain in clinical patients suggest their potential value in cancer diagnosis

  11. Heavy quarks - experimental

    International Nuclear Information System (INIS)

    Hollebeek, R.

    1990-01-01

    The purpose of these lectures, given at the 1989 SLAC Summer School, was to discuss the experimental aspects of heavy quark production. A companion set of lectures on the theoretical point of view were to be given by Keith Ellis. An experimentalist should gather together the measurements which have been made by various groups, compare, contrast and tabulate them, and if possible point out the ways in which these measurements confirm or contradict current theories. Here the authors has tried to do this, although the reader who expects to find here the latest of all experimental measurements should probably be forewarned that the field is moving extremely rapidly. In some cases, he has added and updated materials where crucial new information became available after or during the summer of 1989, but not in all cases. He has concentrated on trying to select those measurements which are at the moment most crucial in refining our understanding of heavy quarks as opposed to those which merely measure things which are perhaps too complicated to be enlightening at the moment. While theorists worry primarily about production mechanisms, cross sections, QCD corrections, and to some extent about signatures, the experimentalist must determine which measurements he is interested in making, and which signatures for heavy quark production are realistic and likely to produce results which will shed some new light on the underlying production model without undo theoretical complications. Experimentalists also need to evaluate the available experimental equipment, both machines and detectors to find the best way to investigate the properties of heavy quarks. In many cases, the things which we would like to measure are severely restricted by what we can measure. Nevertheless, many properties of heavy quark production and decay can be measured, and the results have already taught us much about the weak interactions and QCD

  12. Heavy water at Aswan

    International Nuclear Information System (INIS)

    1959-01-01

    A fertilizer factory is being built by Egyptian Chemical Industries (Kima) at Aswan on the upper Nile; it will produce a mixture of ammonium nitrate and calcium carbonate adjusted to contain 20.5% nitrogen. It is also proposed to construct a heavy water plant to be located at and integrated with the fertilizer factory. At the request of the Government of the United Arab Republic, the International Atomic Energy Agency sent an expert to carry out investigation of the technical, economic and other related aspects of the proposed production of heavy water. A report was submitted to the IAEA Director General. Its main conclusions can be summarized as follows: (1) Production of heavy water as a by-product of fertilizer manufacture at Aswan is technically feasible. Separation of deuterium from industrial hydrogen for this purpose could be done either by catalytic exchange or by liquefaction and distillation; the choice should depend on economic considerations. (2) The heavy water produced at Aswan should be competitive in cost with that produced elsewhere; this, however, would depend on whether firm contracts are obtained for the delivery of equipment at guaranteed prices and with guaranteed performance, and whether such prices are in reasonable agreement with preliminary estimates. (3) The future market for heavy water is difficult to predict. For one thing, there is a very large production capacity in the USA, most of which is idle due to lack of demand. Secondly, there is a relatively small production outside the USA that is sold at prices higher than that charged by the US Government. The future of the market is necessarily contingent upon the possibility of future free sale by the US Government. At the end of his report, the expert has also given his comments on possible further assistance to the project by IAEA

  13. Heavy Flavour Production at HERA

    International Nuclear Information System (INIS)

    Bailey, D.

    2001-01-01

    ZEUS and H1 results on heavy quark production using the HERA data from 1995 to 2000 are summarised with emphasis on unresolved problems. The HERA upgrade and its impact on future heavy flavour measurements is briefly discussed

  14. (17) ACCUMULATION OF HEAVY METAL

    African Journals Online (AJOL)

    Adeyinka Odunsi

    Spectrophotometer (AAS) 2ID using their respective lamp and wavelengths. Calculation ... (Table 2). Concentration of heavy metals in the cassava. Lead and chromium were not significantly ..... Market basket survey for some heavy metals in ...

  15. Reverse transcriptase-real time PCR analysis of heavy metal stress response in a uranium resistant Pseudomonas aeruginosa strain isolated from Jaduguda uranium mine

    International Nuclear Information System (INIS)

    Choudhary, Sangeeta; Sar, Pinaki

    2011-01-01

    observed difference in transcriptional response could possibly be explained in light of role of heavy metals in their regulation. Metal resistance genes tend to provide cellular defense specifically at low concentration; while at higher metal levels strategies that are more general are adopted. In contrast, sodA gene is activated by superoxide free radical and not directly by metal cations, therefore shows increased expression only when the metal concentration cross certain threshold that generate enough reactive oxygen species by the interaction of metals and cellular components. Therefore it can be suggested that these metal responsive genes may serve as potential biomarkers to determine physiology and abundance of this bacterium when used for bioremediation activities in sites heavily contaminated with metallic pollutants. (author)

  16. Heavy water upgrader of 'Fugen'

    International Nuclear Information System (INIS)

    Matsushita, Tadashi; Sasaki, Shigeo

    1980-01-01

    The nuclear power station of the advanced thermal prototype reactor ''Fugen'' has continued the smooth operation since it started the fullscale operation in March, 1979. Fugen is the first heavy water-moderated, boiling light water-cooled reactor in Japan, and its outstanding feature is the use of heavy water as the moderator. The quantity of heavy water retained in Fugen is about 140 m 3 , and the concentration is 99.8 wt.%. This heavy water had been made is USA, and was imported from F.R. of Germany where it had been used. Heavy water is an internationally regulated material, and it is very expensive and hard to purchase. Therefore in order to prevent the deterioration of heavy water and to avoid its loss as far as possible, the management of the quantity and the control of the water quality have been carried out carefully and strictly. The generation of deteriorated heavy water occurs from the exchange of ion exchange resin for poison removal and purification. The heavy water upgrader reconcentrates the deteriorated heavy water of high concentration and returns to the heavy water system, and it was installed for the purpose of reducing the purchase of supplementary heavy water. The outline of the heavy water upgrader, its construction, the performance test and the operation are described. (Kako, I.)

  17. RNA-guided transcriptional regulation

    Science.gov (United States)

    Church, George M.; Mali, Prashant G.; Esvelt, Kevin M.

    2016-02-23

    Methods of modulating expression of a target nucleic acid in a cell are provided including introducing into the cell a first foreign nucleic acid encoding one or more RNAs complementary to DNA, wherein the DNA includes the target nucleic acid, introducing into the cell a second foreign nucleic acid encoding a nuclease-null Cas9 protein that binds to the DNA and is guided by the one or more RNAs, introducing into the cell a third foreign nucleic acid encoding a transcriptional regulator protein or domain, wherein the one or more RNAs, the nuclease-null Cas9 protein, and the transcriptional regulator protein or domain are expressed, wherein the one or more RNAs, the nuclease-null Cas9 protein and the transcriptional regulator protein or domain co-localize to the DNA and wherein the transcriptional regulator protein or domain regulates expression of the target nucleic acid.

  18. Transcriptional control of megakaryocyte development.

    Science.gov (United States)

    Goldfarb, A N

    2007-10-15

    Megakaryocytes are highly specialized cells that arise from a bipotent megakaryocytic-erythroid progenitor (MEP). This developmental leap requires coordinated activation of megakaryocyte-specific genes, radical changes in cell cycle properties, and active prevention of erythroid differentiation. These programs result from upregulation of megakaryocyte-selective transcription factors, downregulation of erythroid-selective transcription factors and ongoing mediation of common erythro-megakaryocytic transcription factors. Unlike most developmental programs, no single lineage-unique family of master regulators exerts executive control over the megakaryocytic plan. Rather, an assemblage of non-unique factors and signals converge to determine lineage and differentiation. In human megakaryopoiesis, hereditary disorders of platelet production have confirmed contributions from three distinct transcription factor families. Murine models have extended this repertoire to include multiple additional factors. At a mechanistic level, the means by which these non-unique factors collaborate in the establishment of a perfectly unique cell type remains a central question.

  19. Heavy metals in our foodstuffs

    Energy Technology Data Exchange (ETDEWEB)

    1983-11-01

    The special group ''chemistry of food and forensic chemistry'' of the Association of German Analytical Chemists in Munich in 1983 issued a statement on that subject. The publication points out how heavy metals (examples: lead, cadmium and mercury) make their way into the foodstuffs, how many heavy metals are contained in our foodstuffs, which heavy metals are indispensable minerals and which aren't, and which heavy metals are ingested with food. It concludes by discussing how heavy metal contamination of our food can be prevented.

  20. Detecting heavy quarks

    International Nuclear Information System (INIS)

    Benenson, G.; Chau, L.L.; Ludlam, T.; Paige, F.E.; Platner, E.D.; Protopopescu, S.D.; Rehak, P.

    1983-01-01

    In this exercise we examine the performance of a detector specifically configured to tag heavy quark (HQ) jets through direct observations of D-meson decays with a high resolution vertex detector. To optimize the performance of such a detector, we assume the small diamond beam crossing configuration as described in the 1978 ISABELLE proposal, giving a luminosity of 10 32 cm -2 sec -1 . Because of the very large backgrounds from light quark (LQ) jets, most triggering schemes at this luminosity require high P/sub perpendicular to/ leptons and inevitably give missing neutrinos. If alternative triggering schemes could be found, then one can hope to find and calculate the mass of objects decaying to heavy quarks. A scheme using the high resolution detector will also be discussed in detail. The study was carried out with events generated by the ISAJET Monte Carlo and a computer simulation of the described detector system

  1. National Capital Planning Commission Meeting Transcripts

    Data.gov (United States)

    National Capital Planning Commission — Transcripts of the monthly (with the exception of August) National Capital Planning Commission meeting transcripts are provided for research to confirm actions taken...

  2. Heavy ion fusion III

    International Nuclear Information System (INIS)

    Hammer, D.; Max, C.; Perkins, F.; Rosenbluth, M.

    1987-03-01

    This report updates Heavy Ion Fusion, JSR-82-302, dated January, 1983. During the last four years, program management and direction has been changed and the overall Inertial Confinement Program has been reviewed. This report therefore concentrates on accelerator physics issues, how the program has addressed those issues during the last four years, and how it will be addressing them in the future. 8 refs., 3 figs

  3. Experimental heavy quarkonium physics

    International Nuclear Information System (INIS)

    Bugge, L.

    1986-08-01

    Following some brief arguments on why heavy quarkonium spectroscopy is an important field of particle physics, some points on experimental techniques are discussed. Parts of the basic quarkonium phenomenology, including discussions of various items related to potensial models, are then presented. An up-to-date presentation is given of the state-of-the-art of experimental charmonium and bottomonium spectroscopy below open flavour threshold, including the confrontation of experimental results to representative theoretical predictions

  4. Relativistic heavy ion reactions

    Energy Technology Data Exchange (ETDEWEB)

    Brink, D M

    1989-08-01

    The theory of quantum chromodynamics predicts that if nuclear matter is heated to a sufficiently high temperature then quarks might become deconfined and a quark-gluon plasma could be produced. One of the aims of relativistic heavy ion experiments is to search for this new state of matter. These lectures survey some of the new experimental results and give an introduction to the theories used to interpret them. 48 refs., 4 tabs., 11 figs.

  5. Carburetor for heavy oils

    Energy Technology Data Exchange (ETDEWEB)

    Gautreau, L

    1905-03-06

    This invention relates to a carburetor for heavy oils in which the combustion liquid circulates successively in two annular spaces at the top and bottom of the vaporizer heated by the gas from the outlet and returning from there, after having been conveniently heated, to the constant level by an appropriate tube; the constant level can be surrounded by an annular chamber in which circulates a part of the gas from the outlet.

  6. Relativistic heavy ion physics

    International Nuclear Information System (INIS)

    Hansen, O.

    1985-01-01

    In the fall of 1986 beams of heavy ions up to A ∼ 40 at total energies up to E ∼ 225 GeV/-nucleon will become available for experiments at CERN (60 and 225 GeV/nucleon) and at Brookhaven (15.5 GeV/nucleon). Are these energies interesting in relation to the ideas of creating quark deconfinement? An energy consideration of the planned experiments is presented, as well as a description of the experimental arrangement. (Auth.)

  7. Neutrinos: Heavy water detector

    International Nuclear Information System (INIS)

    Anon.

    1990-01-01

    The proponents of the Sudbury Neutrino Observatory (SNO) received a welcome Christmas present when William Winegard, Canadian Minister for Science and Technology announced the final details of the funding for this project, totalling 48 million Canadian dollars and including contributions from the US and the UK. The SNO experiment will extend significantly the study of solar neutrinos, using some 1,000 tonnes of heavy water to be installed more than two kilometres below ground in a nickel mine at Sudbury, Ontario

  8. Canadian heavy water production

    International Nuclear Information System (INIS)

    Dahlinger, A.; Lockerby, W.E.; Rae, H.K.

    1977-01-01

    The paper reviews Canadian experience in the production of heavy water, presents a long-term supply projection, relates this projection to the anticipated long-term electrical energy demand, and highlights principal areas for further improvement that form the bulk of the Canadian R and D programme on heavy water processes. Six Canadian heavy water plants with a total design capacity of 4000Mg/a are in operation or under construction. All use the Girdler-Sulphide (GS) process, which is based on deuterium exchange between water and hydrogen sulphide. Early operating problems have been overcome and the plants have demonstrated annual capacity factors in excess of 70%, with short-term production rates equal to design rates. Areas for further improvement are: to increase production rates by optimizing the control of foaming to give both higher sieve tray efficiency and higher flow rates, to reduce the incapacity due to deposition of pyrite (FeS 2 ) and sulphur (between 5% and 10%), and to improve process control and optimization of operating conditions by the application of mathematical simulations of the detailed deuterium profile throughout each plant. Other processes being studied, which look potentially attractive are the hydrogen-water exchange and the hydrogen-amine exchange. Even if they become successful competitors to the GS process, the latter is likely to remain the dominant production method for the next 10-20 years. This programme, when related to the long-term electricity demand, indicates that heavy water supply and demand are in reasonable balance and that the Candu programme will not be inhibited because of shortages of this commodity. (author)

  9. Relativistic heavy ion reactions

    International Nuclear Information System (INIS)

    Brink, D.M.

    1989-08-01

    The theory of quantum chromodynamics predicts that if nuclear matter is heated to a sufficiently high temperature then quarks might become deconfined and a quark-gluon plasma could be produced. One of the aims of relativistic heavy ion experiments is to search for this new state of matter. These lectures survey some of the new experimental results and give an introduction to the theories used to interpret them. 48 refs., 4 tabs., 11 figs

  10. Utah Heavy Oil Program

    Energy Technology Data Exchange (ETDEWEB)

    J. Bauman; S. Burian; M. Deo; E. Eddings; R. Gani; R. Goel; C.K. Huang; M. Hogue; R. Keiter; L. Li; J. Ruple; T. Ring; P. Rose; M. Skliar; P.J. Smith; J.P. Spinti; P. Tiwari; J. Wilkey; K. Uchitel

    2009-10-20

    The Utah Heavy Oil Program (UHOP) was established in June 2006 to provide multidisciplinary research support to federal and state constituents for addressing the wide-ranging issues surrounding the creation of an industry for unconventional oil production in the United States. Additionally, UHOP was to serve as an on-going source of unbiased information to the nation surrounding technical, economic, legal and environmental aspects of developing heavy oil, oil sands, and oil shale resources. UHOP fulGilled its role by completing three tasks. First, in response to the Energy Policy Act of 2005 Section 369(p), UHOP published an update report to the 1987 technical and economic assessment of domestic heavy oil resources that was prepared by the Interstate Oil and Gas Compact Commission. The UHOP report, entitled 'A Technical, Economic, and Legal Assessment of North American Heavy Oil, Oil Sands, and Oil Shale Resources' was published in electronic and hard copy form in October 2007. Second, UHOP developed of a comprehensive, publicly accessible online repository of unconventional oil resources in North America based on the DSpace software platform. An interactive map was also developed as a source of geospatial information and as a means to interact with the repository from a geospatial setting. All documents uploaded to the repository are fully searchable by author, title, and keywords. Third, UHOP sponsored Give research projects related to unconventional fuels development. Two projects looked at issues associated with oil shale production, including oil shale pyrolysis kinetics, resource heterogeneity, and reservoir simulation. One project evaluated in situ production from Utah oil sands. Another project focused on water availability and produced water treatments. The last project considered commercial oil shale leasing from a policy, environmental, and economic perspective.

  11. Outlook for Saskatchewan heavy oil

    International Nuclear Information System (INIS)

    Youzwa, P.

    1993-01-01

    Some of the opportunities and challenges currently facing the heavy oil industry in Saskatchewan are discussed from a government perspective. By the end of September 1993, 220 heavy oil wells were drilled in the province, and 26% of the land sales in 1993 were in heavy oil areas. About 41% of the wells drilled in heavy oil areas were horizontal oil wells. Of the total horizontal wells drilled in Saskatchewan, 48% are for heavy oil, and horizontal well production averages 85 bbl/d. Initial trends suggest that horizontal wells both accelerate production and contribute to ultimate recovery. Total heavy oil production in 1992 reached 28.9 million bbl and recoverable reserves in 1991 were 262.3 million bbl, or 1.5% of total oil in place. The low recovery is not only due to technical factors such as high viscosity but also to low investment in the heavy oil sector due to poor economics. It is hoped that lower interest and exchange rates, the success of horizontal wells and the provincial royalty structure will maintain the recent increase in heavy oil activity. The provincial government recently launched a comprehensive energy strategy in which development of a heavy oil strategy is an important component. Total heavy oil reserves exceed those of light and medium oil and have significant development potential. The Saskatchewan government wishes to adopt a cooperative and partnership approach in its dealings with the heavy oil industry to help realize this potential. 9 figs

  12. Heavy ion transfer reactions

    International Nuclear Information System (INIS)

    Weisser, D.C.

    1977-06-01

    To complement discussions on the role of γ rays in heavy ion induced reactions, the author discusses the role played by particle detection. Transfer reactions are part of this subject and are among those in which one infers the properties of the residual nucleus in a reaction by observing the emerging light nucleus. Inelastic scattering ought not be excluded from this subject, although no particles are transferred, because of the role it plays in multistep reactions and in fixing O.M. parameters describing the entrance channel of the reaction. Heavy ion transfer reaction studies have been under study for some years and yet this research is still in its infancy. The experimental techniques are difficult and the demands on theory rigorous. One of the main products of heavy ion research has been the thrust to re-examine the assumptions of reaction theory and now include many effects neglected for light ion analysis. This research has spurred the addition of multistep processes to simple direct processes and coupled channel calculations. (J.R.)

  13. Heavy ion fusion

    International Nuclear Information System (INIS)

    Hofmann, Ingo

    1993-01-01

    With controlled thermonuclear fusion holding out the possibility of a prolific and clean new source of energy, the goal remains elusive after many years of continual effort. While the conventional Tokamak route with magnetic confinement continues to hit the headlines, other alternatives are now becoming competitive. One possible solution is to confine the thermonuclear fuel pellet by high power beams. Current research and perspectives for future work in such inertial confinement was the subject of the 'Prospects for Heavy Ion Fusion' European Research Conference held in Aghia Pelaghia, Crete, last year. Its main focus was on the potential of heavy ion accelerators as well as recent advances in target physics with high power lasers and light ion beams. Carlo Rubbia declared that high energy accelerators, with their high efficiency, are the most promising approach to economical fusion energy production. However the need for cost saving in the driver accelerator requires new ideas in target design tailored to the particularities of heavy ion beams, which need to be pushed to the limits of high current and phase space density at the same time

  14. Heavy flavor spectroscopy

    International Nuclear Information System (INIS)

    Rosen, J.; Marques, J.; Spiegel, L.

    1993-09-01

    As a useful by-product of the unfolding searches for mixing and CP-violation effects in the beauty sector there will accrue very large data samples for the study of heavy flavor spectroscopy. Interest in this field may be provisionally divided into two general classes: Hidden flavor states, i.e. c bar c and b bar b onium states; open flavor states: The D, D s , B, B s , and B c meson systems; and charm and beauty flavored baryons. In this brief note we emphasize that there are many missing states in both categories -- states which are not readily produced exclusively due to quantum number preferences or states which are not readily observed inclusively due to experimentally difficult decay channels. As recorded luminosities increase it may be possible to fill in some of the holes in the present listings of heavy flavor states. Of particular interest to us would be the identification of heavy flavor mesons which are not easily explained in terms of a q bar q paradigm but rather may be evidence for hadro-molecular states. At Snowmass 1993 the topic of self-tagging schemes in B meson production was very much in vogue. Whether or not excited B-meson flavor-tagging will prove to be competitive with traditional methods based on the partner bar B decay remains to be seen. We suggest however that the richness of the excited B-system may undermine the efficacy of self-tagging schemes

  15. Searching for heavy leptons

    International Nuclear Information System (INIS)

    Perl, M.L.

    1979-11-01

    This frankly speculative paper discusses ways in which leptons heavier than the tau (if they exist) might be found. The status of the tau is briefly reviewed, and methods for searching for sequential charged leptons beyond the tau and other charged leptons at PEP, PETRA, and CESR are sketched. Charged leptons with mass greater than 20 GeV/c 2 might be found at proton accelerators in hadron-hadron, photon-hadron, or ν-hadron collisions. Unstable, neutral heavy leptons might have unique, conserved lepton number or nonunique lepton number. The most difficult leptons to detect are stable neutral heavy leptons; nevertheless, a possible detection method is suggested. The obvious solution to seeking the postulated leptons is an e + e - colliding beam storage ring with c.m. energy = several hundred GeV. Until such a machine is built, one can employ Z 0 → L + + L - ; the use of R/sub Z 0 / and GAMMA/sub Z 0 / in this connection is discussed. If heavier Z 0 's exist, the heavy lepton search can be extended to higher energies. Another solution for producing these leptons involves the use of clashing e + e - linear accelerators. Characteristics of storage rings are compared with those of clashing linacs; a general description is given of the proposed SLAC Linac-Collider, along with the physics that could be done at such a machine. 6 figures

  16. Heavy flavor spectroscopy

    International Nuclear Information System (INIS)

    Rosen, J.; Marques, J.; Spiegel, L.

    1993-01-01

    As a useful by-product of the unfolding searches for mixing and CP-violation effects in the beauty sector there will accrue very large data samples for the study of heavy flavor spectroscopy. (I) Hidden flavor states, i.e. c bar c and b bar b onium states. (II) Open flavor states (a) the D, D s , B, B s , and B c meson systems; (b) Charm and beauty flavored baryons. In this brief note the authors emphasize that there are many missing (undiscovered) states in both categories - states which are not readily produced exclusively due to quantum number preferences or states which are not readily observed inclusively due to experimentally difficult decay channels. As recorded luminosities increase it may be possible to fill in some of the holes in the present listings of heavy flavor states. Of particular interest to the authors would be the identification of heavy flavor mesons which are not easily explained in terms of a q bar q paradigm but rather may be evidence for hadro-molecular status. At Snowmass 1993 the topic of self-tagging schemes in B meson production was very much in vogue. Whether or not excited B-meson flavor-tagging will prove to be competitive with traditional methods based on the partner B decay remains to be seen. The authors suggest however that the richness of the excited B-system may undetermine the efficacy of self-tagging schemes

  17. Heavy ion inertial fusion

    International Nuclear Information System (INIS)

    Fessenden, T.J.; Friedman, A.

    1991-01-01

    This report describes the research status in the following areas of research in the field of heavy ion inertial fusion: (1) RF accelerators, storage rings, and synchrotrons; (2) induction linacs; (3) recirculation induction accelerator approach; (4) a new accelerator concept, the ''Mirrortron''; (5) general issues of transport, including beam merging, production of short, fat quadrupoles with nearly linear focusing, calculations of beam behaviour in image fields; 3-D electrostatic codes on drift compression with misalignments and transport around bends; (6) injectors, ion sources and RFQs, a.o., on the development of a 27 MHz RFQ to be used for the low energy portion of a new injector for all ions up to Uranium, and the development of a 2 MV carbon ion injector to provide 16 C + beams of 0.5 A each for ILSE; (7) beam transport from accelerator to target, reporting, a.o., the feasibility to suppress third-order aberrations; while Particle-in-Cell simulations on the propagation of a non-neutral ion beam in a low density gas identified photo-ionization by thermal X-rays from the target as an important source of defocusing; (9) heavy ion target studies; (10) reviewing experience with laser drivers; (11) ion cluster stopping and muon catalyzed fusion; (12) heavy ion systems, including the option of a fusion-fission burner. 1 tab

  18. Heavy-heavy and heavy-light quarks interactions generated by QCD vacuum

    Directory of Open Access Journals (Sweden)

    Musakhanov Mirzayusuf

    2017-01-01

    Full Text Available The QCD vacuum is populated by instantons that correspond to the tunneling processes in the vacuum. This mechanism creates the strong vacuum gluon fields. As result, the QCD vacuum instantons induce very strong interactions between light quarks, initially almost massless. Such a strong interactions bring a large dynamical mass M of the light quarks and bound them to produce almost massless pions in accordance with the spontaneous breaking of the chiral symmetry (SBCS. On the other hand, the QCD vacuum instantons also interact with heavy quarks and responsible for the generation of the heavy-heavy and heavy-light quarks interactions, with a traces of the SBCS. If we take the average instanton size ρ¯=0.33$\\bar \\rho = 0.33$ fm, and the average inter-instanton distance R¯=1$\\bar R = 1$ fm we obtain the dynamical light quark mass to be M = 365 MeV and the instanton media contribution to the heavy quark mass ΔM=70 MeV. These factors define the coupling between heavy-light and heavy-heavy quarks induced by the QCD vacuum instantons. We consider first the instanton effects on the heavy-heavy quarks potential, including its spin-dependent part. We also discuss those effects on the masses of the charmonia and their hyperfine mass splittings. At the second part we discuss the interaction between a heavy and light quarks generated by instantons and it’s effects.

  19. Determination of heavy water in heavy water - light water mixtures

    International Nuclear Information System (INIS)

    Sanhueza M, A.

    1986-01-01

    A description about experimental methodology to determine isotopic composition of heavy water - light water mixtures is presented. The employed methods are Nuclear Magnetic Resonance Spectroscopy, for measuring heavy water concentrations from 0 to 100% with intervals of 10% approx., and mass Spectrometry, for measuring heavy water concentrations from 0.1 to 1% with intervals of 0.15% approx., by means of an indirect method of Dilution. (Author)

  20. Heavy water upgrading system in the Fugen heavy water reactor

    International Nuclear Information System (INIS)

    Matsushita, T.; Susaki, S.

    1980-01-01

    The heavy water upgrading system, which is installed in the Fugen heavy water reactor (HWR) was designed to reuse degraded heavy water generated from the deuteration-dedeuteration of resin in the ion exchange column of the moderator purification system. The electrolysis method has been applied in this system on the basis of the predicted generation rate and concentration of degraded heavy water. The structural feature of the electrolytic cell is that it consists of dual cylindrical electrodes, instead of a diaphragm as in the case of conventional water electrolysis. 2 refs

  1. Heavy Truck Engine Program

    Energy Technology Data Exchange (ETDEWEB)

    Nelson, Christopher

    2009-01-08

    The Heavy Duty Truck Engine Program at Cummins embodied three significant development phases. All phases of work strove to demonstrate a high level of diesel engine efficiency in the face of increasingly stringent emission requirements. Concurrently, aftertreatment system development and refinement was pursued in support of these efficiency demonstrations. The program's first phase focused on the demonstration in-vehicle of a high level of heavy duty diesel engine efficiency (45% Brake Thermal Efficiency) at a typical cruise condition while achieving composite emissions results which met the 2004 U.S. EPA legislated standards. With a combination of engine combustion calibration tuning and the development and application of Urea-based SCR and particulate aftertreatment, these demonstrations were successfully performed by Q4 of 2002. The second phase of the program directed efforts towards an in-vehicle demonstration of an engine system capable of meeting 2007 U.S. EPA legislated emissions requirements while achieving 45% Brake Thermal Efficiency at cruise conditions. Through further combustion optimization, the refinement of Cummins Cooled EGR architecture, the application of a high pressure common rail fuel system and the incorporation of optimized engine parasitics, Cummins Inc. successfully demonstrated these deliverables in Q2 of 2004. The program's final phase set a stretch goal of demonstrating 50% Brake Thermal Efficiency from a heavy duty diesel engine system capable of meeting 2010 U.S. EPA legislated emissions requirements. Cummins chose to pursue this goal through further combustion development and refinement of the Cooled EGR system architecture and also applied a Rankine cycle Waste Heat Recovery technique to convert otherwise wasted thermal energy to useful power. The engine and heat recovery system was demonstrated to achieve 50% Brake Thermal Efficiency while operating at a torque peak condition in second quarter, 2006. The 50% efficient

  2. Heavy fragment radioactivity

    International Nuclear Information System (INIS)

    Silisteanu, I.

    1991-06-01

    The effect of collective mode excitation in heavy fragment radioactivity (HFR) is explored and discussed in the light of current experimental data. It is found that the coupling and resonance effects in fragment interaction and also the proper angular momentum effects may lead to an important enhancing of the emission process. New useful procedures are proposed for the study of nuclear decay properties. The relations between different decay processes are investigated in detail. We are also trying to understand and explain in a unified way the reaction mechanisms in decay phenomena. (author). 17 refs, 4 figs, 3 tabs

  3. Fission of heavy hypernuclei

    International Nuclear Information System (INIS)

    Nifenecker, H.

    1993-01-01

    The results on delayed and prompt fission of heavy hypernuclei obtained by the LEAR PS177 collaboration are recalled and discussed. It is shown that the hypernuclei life-times can be explained in term of a weak strangeness violating lambda-nucleon interaction with a cross section close to 6.0 10 -15 barns. The lambda attachment function is shown to be sensitive to the scission configuration, just before fission, and to the neck dynamics. This function provides a new way to study the nuclear scission process. (author)

  4. Heavy gas valves

    Energy Technology Data Exchange (ETDEWEB)

    Steier, L [Vereinigte Armaturen Gesellschaft m.b.H., Mannheim (Germany, F.R.)

    1979-01-01

    Heavy gas valves must comply with special requirements. Apart from absolute safety in operation there are stringent requirements for material, sealing and ease of operation even in the most difficult conditions. Ball valves and single plate pipe gate valves lateral sealing rings have a dual, double sided sealing effect according to the GROVE sealing system. Single plate gate valves with lateral protective plates are suitable preferably for highly contaminated media. Soft sealing gate valves made of cast iron are used for low pressure applications.

  5. Relativistic heavy ion collisions

    International Nuclear Information System (INIS)

    Barz, H.W.; Kaempfer, B.; Schulz, H.

    1984-12-01

    An elementary introduction is given into the scenario of relativistic heavy ion collisions. It deals with relativistic kinematics and estimates of energy densities, extrapolations of the present knowledge of hadron-hadron and hadron-nuleus to nucleus-nucleus collisions, the properties of the quark-gluon plasma and the formation of the plasma and possible experimental signatures. Comments are made on a cosmic ray experiment which could be interpreted as a first indication of the quark-gluon phase of the matter. (author)

  6. Heavy Quarkonium Physics

    CERN Document Server

    CERN. Geneva; Krämer, Michael; Mussa, Roberto; Vairo, Antonio; Bali, G S; Bodwin, G T; Braaten, E; Eichten, E; Eidelman, S; Godfrey, S; Hoang, A; Jamin, M; Kharzeev, Dima E; Lombardo, M P; Lourenço, C; Meyer, A B; Papadimitriou, V; Patrignani, C; Rosati, M; Sanchis-Lozano, M A; Satz, Helmut; Soto, J; Besson, D Z; Bettoni, D; Böhrer, A; Boogert, S; Chang, C H; Cooper, P; Crochet, Philippe; Datta, S; Davies, C; Deandrea, A; Faustov, R; Ferguson, T; Galik, R; Harris, F; Iouchtchenko, O; Kaczmarek, O; Karsch, Frithjof; Kienzle, M; Kiselev, V V; Klein, S R; Kroll, P; Kronfeld, A S; Kuang Yu Ping; Laporta, V; Lee, J; Leibovich, A K; Ma, J P; MacKenzie, P; Maiani, Luciano; Mangano, Michelangelo L; Meyer, A; Mo, X H; Morningstar, C; Nairz, A; Napolitano, J; Olsen, S; Penin, A A; Petreczky, P; Piccinini, F; Pineda, A; Polosa, Antonio; Ramello, L; Rapp, R; Richard, J M; Riquer, V; Ricciardi, S; Robutti, E; Schneider, O; Scomparin, E; Simone, J; Skwarnicki, T; Stancari, G; Stewart, I W; Sumino, Y; Teubner, T; Tseng, J; Vogt, R; Wang, P; Yabsley, B D; Yuan, C Z; Zantow, F; Zhao, Z G; Zieminski, A

    2005-01-01

    This report is the result of the collaboration and research effort of the Quarkonium Working Group over the last three years. It provides a comprehensive overview of the state of the art in heavy-quarkonium theory and experiment, covering quarkonium spectroscopy, decay, and production, the determination of QCD parameters from quarkonium observables, quarkonia in media, and the effects on quarkonia of physics beyond the Standard Model. An introduction to common theoretical and experimental tools is included. Future opportunities for research in quarkonium physics are also discussed.

  7. Heavy transport problems

    International Nuclear Information System (INIS)

    Haas, K.F.

    1975-01-01

    Assuming that very often a long transport route from the factory of the manufacturer to the provided site has to be reckoned with, in general only transport with a ship is possible. As each site is only called by a certain steamship line, at a very early stage of planning the nuclear power plant the possibilities and capacities of the lines and means of transportation under discussion should be investigated. In planning the unloading equipment at the site, due consideration should be given to the fact that at a later time this equipment should also be suitable for the transport of heavy components and spent fuel assemblies. (orig.) [de

  8. Heavy Quark Effective Theory

    Science.gov (United States)

    Manohar, A. V.

    2003-02-01

    These lecture notes present some of the basic ideas of heavy quark effective theory. The topics covered include the classification of states, the derivation of the HQET Lagrangian at tree level, hadron masses, meson form factors, Luke's theorem, reparameterization invariance and inclusive decays. Radiative corrections are discussed in some detail, including an explicit computation of a matching correction for HQET. Borel summability, renormalons, and their connection with the QCD perturbation series is covered, as well as the use of the upsilon expansion to improve the convergence of the perturbation series.

  9. Heavy ion storage rings

    International Nuclear Information System (INIS)

    Schuch, R.

    1987-01-01

    A brief overview of synchrotron storage rings for heavy ions, which are presently under construction in different accelerator laboratories is given. Ions ranging from protons up to uranium ions at MeV/nucleon energies will be injected into these rings using multiturn injection from the accelerators available or being built in these laboratories. After injection, it is planned to cool the phase space distribution of the ions by merging them with cold electron beams or laser beams, or by using stochastic cooling. Some atomic physics experiments planned for these rings are presented. 35 refs

  10. [Relativistic heavy ion research

    International Nuclear Information System (INIS)

    1991-01-01

    The present document describes our second-year application for a continuation grant on relativistic heavy-ion research at Nevis Laboratories, Columbia University, over the two-year period starting from November 15, 1990. The progress during the current budget year is presented. This year, construction of RHIC officially began. As a result, the entire Nevis nuclear physics group has made a coherent effort to create new proposal for an Open Axially Symmetric Ion Spectrometer (OASIS) proposal. Future perspectives and our plans for this proposal are described

  11. Heavy ion therapy: Bevalac epoch

    International Nuclear Information System (INIS)

    Castro, J.R.

    1993-10-01

    An overview of heavy ion therapy at the Bevelac complex (SuperHILac linear accelerator + Bevatron) is given. Treatment planning, clinical results with helium ions on the skull base and uveal melanoma, clinical results with high-LET charged particles, neon radiotherapy of prostate cancer, heavy charged particle irradiation for unfavorable soft tissue sarcoma, preliminary results in heavy charged particle irradiation of bone sarcoma, and irradiation of bile duct carcinoma with charged particles and-or photons are all covered

  12. Spectroscopy of doubly heavy baryons

    International Nuclear Information System (INIS)

    Gershtein, S.S.; Kiselev, V.V.; Likhoded, A.K.; Onishchenko, A.I.

    2000-01-01

    Within a nonrelativistic quark model featuring a QCD-motivated Buchmueller-Tye potential, the mass spectra for the families of doubly heavy baryons are calculated by assuming the quark-diquark structure of the baryon wave functions and by taking into account spin-dependent splitting. Physically motivated evidence that, in the case where heavy quarks have identical flavors, quasistationary excited states may be formed in the heavy-diquark subsystem is analyzed

  13. Relativistic heavy-ion physics

    CERN Document Server

    Herrera Corral, G

    2010-01-01

    The study of relativistic heavy-ion collisions is an important part of the LHC research programme at CERN. This emerging field of research focuses on the study of matter under extreme conditions of temperature, density, and pressure. Here we present an introduction to the general aspects of relativistic heavy-ion physics. Afterwards we give an overview of the accelerator facility at CERN and then a quick look at the ALICE project as a dedicated experiment for heavy-ion collisions.

  14. Heavy quark production and spectroscopy

    International Nuclear Information System (INIS)

    Appel, J.A.

    1993-11-01

    This review covers many new experimental results on heavy flavor production and spectroscopy. It also shows some of the increasingly improved theoretical understanding of results in light of basic perturbative QCD and heavy quark symmetry. At the same time, there are some remaining discrepancies among experiments as well as significant missing information on some of the anticipated lowest lying heavy quark states. Most interesting, perhaps, are some clearly measured production effects awaiting full explanation

  15. Heavy quark spectroscopy

    International Nuclear Information System (INIS)

    Rosner, J.L.

    1985-10-01

    New experimental and theoretical developments in heavy quark spectroscopy are reviewed. From studies of J/psi decays, the eta' is found to have some ''glue'' or other inert component, while the iota (a glueball candidate) probably contains some quarks as well. The xi(2.2) persists in new Mark III data, but is not seen by the DM2 collaboration. The production of charmonium states by anti pp reactions is reviewed. First evidence for a P- wave charmed meson, D(2420), has been presented by the ARGUS group. Radiative UPSILON decay studies fail to confirm the zeta(8.3) and begin to place useful limits on Higgs bosons. First results from an experiment at Fermilab on low-background hadronic production of UPSILON states are shown. Accurate measurements of chi/sub b/(1P) masses by the ARGUS collaboration are noted, and interpreted as favoring scalar quark confinement. Studies of t and other heavy quarks will probe the q anti q interaction below 0.05 fm, are likely to be strongly affected by t anti t-Z interference, and can provide varied information on Higgs bosons. 144 refs., 21 figs

  16. Relativistic heavy ion physics

    International Nuclear Information System (INIS)

    Hill, J.C.; Wohn, F.K.

    1992-01-01

    In 1992 a proposal by the Iowa State University experimental nuclear physics group entitled ''Relativistic Heavy Ion Physics'' was funded by the US Department of Energy, Office of Energy Research, for a three-year period beginning November 15, 1991. This is a progress report for the first six months of that period but, in order to give a wider perspective, we report here on progress made since the beginning of calendar year 1991. In the first section, entitled ''Purpose and Trends,'' we give some background on the recent trends in our research program and its evolution from an emphasis on nuclear structure physics to its present emphasis on relativistic heavy ion and RHIC physics. The next section, entitled, ''Physics Research Programs,'' is divided into three parts. First, we discuss our participation in the program to develop a large detector named PHENIX for the RHIC accelerator. Second, we outline progress made in the study of electromagnetic dissociation (ED). A highlight of this endeavor is experiments carried out with the 197 Au beam from the AGS accelerator in April 1991. Third, we discuss progress in completion of our nuclear structure studies. In the final section a list of publications, invited talks and contributed talks starting in 1991 is given

  17. Actinides and heavy fermions

    International Nuclear Information System (INIS)

    Smith, J.L.; Fisk, Z.; Ott, H.R.

    1987-01-01

    The actinide series of elements begins with f-shell electrons forming energy bands, contributing to the bonding, and possessing no magnetic moments. At americium the series switches over to localized f electrons with magnetic moments. In metallic compounds this crossover of behavior can be modified and studied. In this continuum of behavior a few compounds on the very edge of localized f-electron behavior exhibit enormous electronic heat capacities at low temperatures. This is associated with an enhanced thermal mass of the conduction electrons, which is well over a hundred times the free electron mass, and is what led to the label heavy fermion for such compounds. A few of these become superconducting at even lower temperatures. The excitement in this field comes from attempting to understand how this heaviness arises and from the likelihood that the superconductivity is different from that of previously known superconductors. The effects of thorium impurities in UBe 13 were studied as a representative system for studying the nature of the superconductivity

  18. Heavy ion fusion

    International Nuclear Information System (INIS)

    Bock, R.

    1983-01-01

    Two accelerator scenarios for heavy ion fusion are considered as driver candidates for an ICF power plant: the RF linac with storage rings and the induction linac. The necessary beam intensity and beam quality requirements are already believed to be achievable in the long run; repetition rate and accelerator efficiency are not critical issues. Conceptual design studies have indicated that the technical problems of the ICF concept with a heavy ion driver can be solved and that the economical aspects are not prohibitive as compared to other ICF concepts. Nevertheless, many open problems still exist, and some new ones have exhibited themselves, and it has become evident that most of them cannot be investigated with existing facilities and at the present level of effort. The first section of this paper deals with current conceptual design studies and focuses on the interface between the accelerator and the reactor. The second section summarizes the present research programs and recommends that their scope should be expanded and intensified in the areas of accelerator physics and beam-target interaction and target physics. In the third section the author calls for a dedicated facility and reports on the plans and ideas for such a facility. Schematics of two proposed accelerator driver systems--the driver for HIBALL (5 MJ/pulse) and a single-pass four-beam induction linac (3 MJ/pulse)--are provided

  19. Heavy ion accelerating structure

    International Nuclear Information System (INIS)

    Pottier, Jacques.

    1977-01-01

    The heavy ion accelerating structure concerned in this invention is of the kind that have a resonance cavity inside which are located at least two longitudinal conducting supports electrically connected to the cavity by one of their ends in such a way that they are in quarter-wavelength resonance and in phase opposition. Slide tubes are electrically connected alternatively to one or the other of the two supports, they being electrically connected respectively to one or the other end of the side wall of the cavity. The feature of the structure is that it includes two pairs of supports symmetrically placed with respect to the centre line of the cavity, the supports of one pair fitted overhanging being placed symmetrically with respect to the centre line of the cavity, each slide tube being connected to the two supports of one pair. These support are connected to the slide wall of the cavity by an insulator located at their electrically free end. The accelerator structure composed of several structures placed end to end, the last one of which is fed by a high frequency field of adjustable amplitude and phase, enables a heavy ion linear accelerator to be built [fr

  20. Ultrarelativistic heavy ions

    International Nuclear Information System (INIS)

    Pugh, H.G.

    1980-12-01

    Studies with ultrarelativistic heavy ions combine aspects of cosmic ray physics, particle physics, nuclear physics, astrophysics and cosmogenesis. The leading theoretical concerns are the behavior of matter at very high-energy density and flux, the general behavior of space time in collisions, relativistic nuclear theory, and quantum chromodynamics. The field has developed over a period of more than thirty years, since the first observation of heavy nuclei in cosmic rays and the major developments of understanding of high-energy collisions made by Fermi and Landau in the early fifties. In the late sixties the discovery of the parton content of nucleons was rapidly followed by a great extension of high-energy collision phenomenology at the CERN ISR and subsequent confirmation of the QCD theory. In parallel the study of p-nucleus and nucleus-nucleus collisions at very high energies, especially at the CERN PS, Fermilab and the Bevalac, and in cosmic rays demonstrated that studies involving the nucleus opened up a new dimension in studies of the hadronic interaction. It is now at a high level of interest on an international scale, with major new accelerators being proposed to dedicate to this kind of study

  1. Bio-recovery of non-essential heavy metals by intra- and extracellular mechanisms in free-living microorganisms.

    Science.gov (United States)

    García-García, Jorge D; Sánchez-Thomas, Rosina; Moreno-Sánchez, Rafael

    2016-01-01

    Free-living microorganisms may become suitable models for recovery of non-essential and essential heavy metals from wastewater bodies and soils by using and enhancing their accumulating and/or leaching abilities. This review analyzes the variety of different mechanisms developed mainly in bacteria, protists and microalgae to accumulate heavy metals, being the most relevant those involving phytochelatin and metallothionein biosyntheses; phosphate/polyphosphate metabolism; compartmentalization of heavy metal-complexes into vacuoles, chloroplasts and mitochondria; and secretion of malate and other organic acids. Cyanide biosynthesis for extra-cellular heavy metal bioleaching is also examined. These metabolic/cellular processes are herein analyzed at the transcriptional, kinetic and metabolic levels to provide mechanistic basis for developing genetically engineered microorganisms with greater capacities and efficiencies for heavy metal recovery, recycling of heavy metals, biosensing of metal ions, and engineering of metalloenzymes. Copyright © 2016 Elsevier Inc. All rights reserved.

  2. Transcriptional regulation of hepatic lipogenesis.

    Science.gov (United States)

    Wang, Yuhui; Viscarra, Jose; Kim, Sun-Joong; Sul, Hei Sook

    2015-11-01

    Fatty acid and fat synthesis in the liver is a highly regulated metabolic pathway that is important for very low-density lipoprotein (VLDL) production and thus energy distribution to other tissues. Having common features at their promoter regions, lipogenic genes are coordinately regulated at the transcriptional level. Transcription factors, such as upstream stimulatory factors (USFs), sterol regulatory element-binding protein 1C (SREBP1C), liver X receptors (LXRs) and carbohydrate-responsive element-binding protein (ChREBP) have crucial roles in this process. Recently, insights have been gained into the signalling pathways that regulate these transcription factors. After feeding, high blood glucose and insulin levels activate lipogenic genes through several pathways, including the DNA-dependent protein kinase (DNA-PK), atypical protein kinase C (aPKC) and AKT-mTOR pathways. These pathways control the post-translational modifications of transcription factors and co-regulators, such as phosphorylation, acetylation or ubiquitylation, that affect their function, stability and/or localization. Dysregulation of lipogenesis can contribute to hepatosteatosis, which is associated with obesity and insulin resistance.

  3. Structural insights into transcription complexes

    NARCIS (Netherlands)

    Berger, I.; Blanco, A.G.; Boelens, R.; Cavarelli, J.; Coll, M.; Folkers, G.E.; Nie, Y.; Pogenberg, V.; Schultz, P.; Wilmanns, M.; Moras, D.; Poterszman, A.

    2011-01-01

    Control of transcription allows the regulation of cell activity in response to external stimuli and research in the field has greatly benefited from efforts in structural biology. In this review, based on specific examples from the European SPINE2-COMPLEXES initiative, we illustrate the impact of

  4. Transcription factor-based biosensor

    Science.gov (United States)

    Dietrich, Jeffrey A; Keasling, Jay D

    2013-10-08

    The present invention provides for a system comprising a BmoR transcription factor, a .sigma..sup.54-RNA polymerase, and a pBMO promoter operatively linked to a reporter gene, wherein the pBMO promoter is capable of expression of the reporter gene with an activated form of the BmoR and the .sigma..sup.54-RNA polymerase.

  5. Heavy flavours in ultra-relativistic heavy ions collisions

    International Nuclear Information System (INIS)

    Rosnet, Ph.

    2008-01-01

    The ultra-relativistic collisions of heavy ions are the today's only means to tackle in laboratory conditions the phase diagram in quantum chromodynamics and the strong interaction. The most recent theoretical studies predict a phase transition between the cold nuclear matter (a hadronic gas) and a plasma of quarks and gluons. Heavy flavour can characterize the nuclear matter produced in a heavy ion collision as well as its spatial-temporal evolution. Their study can be made through their decay into muons. The first part of this work presents the issue of ultra-relativistic heavy ion collisions and the role of heavy flavours. In the second part the author reviews the results of experiments performed at RHIC and particularly presents the analysis of the mass spectrum of dimuons in the Phenix experiment. The third part describes the muon trigger system of the Alice experiment at CERN and the expected performances for the study of di-muons

  6. Heavy ion inertial fusion

    International Nuclear Information System (INIS)

    Keefe, D.; Sessler, A.M.

    1980-01-01

    Inertial fusion has not yet been as well explored as magnetic fusion but can offer certain advantages as an alternative source of electric energy for the future. Present experiments use high-power beams from lasers and light-ion diodes to compress the deuterium-tritium (D-T) pellets but these will probably be unsuitable for a power plant. A more promising method is to use intense heavy-ion beams from accelerator systems similar to those used for nuclear and high-energy physics; the present paper addresses itself to this alternative. As will be demonstrated the very high beam power needed poses new design questions, from the ion-source through the accelerating system, the beam transport system, to the final focus. These problems will require extensive study, both theoretically and experimentally, over the next several years before an optimum design for an inertial fusion driver can be arrived at. (Auth.)

  7. Relativistic heavy ion physics

    International Nuclear Information System (INIS)

    Hill, J.C.; Wohn, F.K.

    1993-01-01

    This is a progress report for the period May 1992 through April 1993. The first section, entitled ''Purpose and Trends, gives background on the recent trends in the research program and its evolution from an emphasis on nuclear structure physics to its present emphasis on relativistic heavy ion and RHIC physics. The next section, entitled ''Physics Research Progress'', is divided into four parts: participation in the program to develop a large detector named PHENIX for the RHIC accelerator; joining E864 at the AGS accelerator and the role in that experiment; progress made in the study of electromagnetic dissociation highlight of this endeavor is an experiment carried out with the 197 Au beam from the AGS accelerator in April 1992; progress in completion of the nuclear structure studies. In the final section a list of publications, invited talks, and contributed talks is given

  8. Heavy ion beam probing

    International Nuclear Information System (INIS)

    Hickok, R.L.

    1980-07-01

    This report consists of the notes distributed to the participants at the IEEE Mini-Course on Modern Plasma Diagnostics that was held in Madison, Wisconsin in May 1980. It presents an overview of Heavy Ion Beam Probing that briefly describes the principles and discuss the types of measurements that can be made. The problems associated with implementing beam probes are noted, possible variations are described, estimated costs of present day systems, and the scaling requirements for large plasma devices are presented. The final chapter illustrates typical results that have been obtained on a variety of plasma devices. No detailed calculations are included in the report, but a list of references that will provide more detailed information is included

  9. Heavy ion inertial fusion

    International Nuclear Information System (INIS)

    Keefe, D.; Sessler, A.M.

    1980-07-01

    Inertial fusion has not yet been as well explored as magnetic fusion but can offer certain advantages as an alternative source of electric energy for the future. Present experiments use high-power beams from lasers and light-ion diodes to compress the deuterium-tritium (D-T) pellets but these will probably be unsuitable for a power plant. A more promising method is to use intense heavy-ion beams from accelerator systems similar to those used for nuclear and high-energy physics; the present paper addresses itself to this alternative. As will be demonstrated the very high beam power needed poses new design questions, from the ion source through the accelerating system, the beam transport system, to the final focus. These problems will require extensive study, both theoretically and experimentally, over the next several years before an optimum design for an inertial fusion driver can be arrived at

  10. HEAVY ION LINEAR ACCELERATOR

    Science.gov (United States)

    Van Atta, C.M.; Beringer, R.; Smith, L.

    1959-01-01

    A linear accelerator of heavy ions is described. The basic contributions of the invention consist of a method and apparatus for obtaining high energy particles of an element with an increased charge-to-mass ratio. The method comprises the steps of ionizing the atoms of an element, accelerating the resultant ions to an energy substantially equal to one Mev per nucleon, stripping orbital electrons from the accelerated ions by passing the ions through a curtain of elemental vapor disposed transversely of the path of the ions to provide a second charge-to-mass ratio, and finally accelerating the resultant stripped ions to a final energy of at least ten Mev per nucleon.

  11. Heavy-ion superconducting linacs

    International Nuclear Information System (INIS)

    Delayen, J.R.

    1989-01-01

    This paper reviews the status of the superconducting heavy-ion accelerators. Most of them are linacs used as boosters for tandem electrostatic accelerators, although the technology is being extended to very low velocity to eliminate the need for an injector. The characteristics and features of the various superconducting heavy-ion accelerators are discussed. 45 refs

  12. Heavy-ion superconducting linacs

    Energy Technology Data Exchange (ETDEWEB)

    Delayen, J.R.

    1989-01-01

    This paper reviews the status of the superconducting heavy-ion accelerators. Most of them are linacs used as boosters for tandem electrostatic accelerators, although the technology is being extended to very low velocity to eliminate the need for an injector. The characteristics and features of the various superconducting heavy-ion accelerators are discussed. 45 refs.

  13. Heavy fermion and actinide materials

    International Nuclear Information System (INIS)

    1993-01-01

    During this period, 1/N expansions have been systematically applied to the calculation of the properties of highly correlated electron systems. These studies include examinations of (a) the class of materials known as heavy fermion semi-conductors, (b) the high energy spectra of heavy fermion systems, and (c) the doped oxide superconductors

  14. Heavy metals and soil microbes

    NARCIS (Netherlands)

    Giller, K.E.; Witter, E.; McGrath, S.

    2009-01-01

    The discovery in the early 1980s that soil microorganisms, and in particular the symbiotic bacteria Rhizobium, were highly sensitive to heavy metals initiated a new line of research. This has given us important insights into a range of topics: ecotoxicology, bioavailability of heavy metals, the role

  15. Heavy charged particle therapy

    International Nuclear Information System (INIS)

    Mizoe, Jun-etsu

    1995-01-01

    A pilot study of heavy charged particles with heavy ion medical accelerator in Chiba (HIMAC) for advanced H and N cancer has been carried out from June 1994 at National Institute of Radiological Sciences (NIRS). As of the beginning of August 1994, three patients were treated by 290 MeV carbon ions. The patients had adenocarcinoma of the cheek mucosa, squamous cell carcinoma of the ethmoid sinus and adenoid cystic carcinoma of the sublingual gland. Patients were immobilized by individual head coach and thermosplint facial shell. Individual collimators and bolus were also prepared for each ports. Dose fractionation for the initial pilot study group was 16.2 GyE/18 fractions/6 weeks, which would be equivalent to standard fractionation of 60.0 Gy/30 fractions/6 weeks with photons. This dose fractionation was considered to be 20% lesser than 75 GyE/37.5 fractions/7.5 weeks, which is estimated to be maximum tolerance dose for advanced H and N cancers. HIMAC worked well and there was no major trouble causing any treatment delay. Acute skin reactions of 3 patients were 2 cases of bright erythema with patchy moist desquamation and one of dull erythema, which were evaluated as equivalent reaction with irradiated dose. Acute mucosa reactions appeared to have lesser reaction than predicted mucositis. Tumor reactions of three patients were partial reaction (PR) at the end of treatment and nearly complete remission (CR) after 6 months of treatment. From October 1994, we started to treat patients with advanced H and N cancer with 10% high dose than previous dose. And new candidates of pilot study with non small cell lung cancer, brain tumor and carcinoma of the tongue were entered into pilot study. At the end of February 1995, a total of 21 patients were treated by carbon ions. (J.P.N.)

  16. Results of heavy ion radiotherapy

    International Nuclear Information System (INIS)

    Castro, J.R.

    1994-04-01

    The potential of heavy ion therapy for clinical use in cancer therapy stems from the biological parameters of heavy charged particles, and their precise dose localization. Biologically, carbon, neon and other heavy ion beams (up to about silicon) are clinically useful in overcoming the radioresistance of hypoxic tumors, thus increasing biological effectiveness relative to low-LET x-ray or electron beams. Cells irradiated by heavy ions show less variation in cell-cycle related radiosensitivity and decreased repair of radiation injury. The physical parameters of these heavy charged particles allow precise delivery of high radiation doses to tumors while minimizing irradiation of normal tissues. Clinical use requires close interaction between radiation oncologists, medical physicists, accelerator physicists, engineers, computer scientists and radiation biologists

  17. Heavy metal sorption by microalgae

    International Nuclear Information System (INIS)

    Sandau, E.; Sandau, P.; Pulz, O.

    1996-01-01

    Viable microalgae are known to be able to accumulate heavy metals (bioaccumulation). Against a background of the increasing environmental risks caused by heavy metals, the microalgae Chlorella vulgaris and Spirulina platensis and their potential for the biological removal of heavy metals from aqueous solutions were taken as an example for investigation. Small-scale cultivation tests (50 l) with Cd-resistant cells of Chlorella vulgaris have shown that approx. 40% of the added 10 mg Cd/l was removed from the solution within seven days. At this heavy metal concentration sensitive cells died. Non-viable microalgae are able to eliminate heavy metal ions in a short time by biosorption in uncomplicated systems, without any toxicity problems. Compared with original biomasses, the sorption capacity of microalgal by-products changes only insignificantly. Their low price makes them economical. (orig.)

  18. Characterization of an Oct1 orthologue in the channel catfish, Ictalurus punctatus: A negative regulator of immunoglobulin gene transcription?

    NARCIS (Netherlands)

    Lennard, M.L.; Hikima, J.I.; Ross, D.A.; Kruiswijk, C.P.; Wilson, M.R.; Miller, N.W.; Warr, G.W.

    2007-01-01

    Background - The enhancer (E¿3') of the immunoglobulin heavy chain locus (IGH) of the channel catfish (Ictalurus punctatus) has been well characterized. The functional core region consists of two variant Oct transcription factor binding octamer motifs and one E-protein binding ¿E5 site. An

  19. Traversing the Links between Heavy Metal Stress and Plant Signaling

    Science.gov (United States)

    Jalmi, Siddhi K.; Bhagat, Prakash K.; Verma, Deepanjali; Noryang, Stanzin; Tayyeba, Sumaira; Singh, Kirti; Sharma, Deepika; Sinha, Alok K.

    2018-01-01

    Plants confront multifarious environmental stresses widely divided into abiotic and biotic stresses, of which heavy metal stress represents one of the most damaging abiotic stresses. Heavy metals cause toxicity by targeting crucial molecules and vital processes in the plant cell. One of the approaches by which heavy metals act in plants is by over production of reactive oxygen species (ROS) either directly or indirectly. Plants act against such overdose of metal in the environment by boosting the defense responses like metal chelation, sequestration into vacuole, regulation of metal intake by transporters, and intensification of antioxidative mechanisms. This response shown by plants is the result of intricate signaling networks functioning in the cell in order to transmit the extracellular stimuli into an intracellular response. The crucial signaling components involved are calcium signaling, hormone signaling, and mitogen activated protein kinase (MAPK) signaling that are discussed in this review. Apart from signaling components other regulators like microRNAs and transcription factors also have a major contribution in regulating heavy metal stress. This review demonstrates the key role of MAPKs in synchronously controlling the other signaling components and regulators in metal stress. Further, attempts have been made to focus on metal transporters and chelators that are regulated by MAPK signaling. PMID:29459874

  20. Baryons in the heavy quark effective theory

    International Nuclear Information System (INIS)

    Mannel, T.; Roberts, W.; Ryzak, Z.

    1990-08-01

    We show how to incorporate baryons in the heavy quark effective theory. A convenient formalism is exhibited and applied to semileptonic weak decays of heavy baryons and to exclusive production of heavy baryons in e + e - annihilation. (orig.)

  1. Alternative staffing services. Contract transcription.

    Science.gov (United States)

    Tessier, C

    1992-03-01

    Contract medical transcription services can be of great assistance in meeting the demands for transcription, without jeopardizing patient, physician, or institutional confidentiality. You simply must require the contract service to provide at least the same degree of protection and preservation of confidentiality that you should require inhouse. To achieve this you must make these requirements explicit, comprehensive, comprehensible, believable, and enforceable. Discuss the requirements with prospective contractors. Review them at least annually with existing contractors and when contracts are due for renewal. Be sure to specify the consequence of breaching confidentiality, and if there are breaches, enforce the terms of the contract. Consult your institution's legal counsel both in developing the contract and in enforcing its provisions. Take into consideration your department's and institution's policies, AHIMA's statement on confidentiality, as well as local, state, and federal laws. Above all, never lose sight of the patient. Ultimately, it is not patient information that you are obligated to protect. It is the patient.

  2. The post-transcriptional operon

    DEFF Research Database (Denmark)

    Tenenbaum, Scott A.; Christiansen, Jan; Nielsen, Henrik

    2011-01-01

    model (PTO) is used to describe data from an assortment of methods (e.g. RIP-Chip, CLIP-Chip, miRNA profiling, ribosome profiling) that globally address the functionality of mRNA. Several examples of post-transcriptional operons have been documented in the literature and demonstrate the usefulness...... of the model in identifying new participants in cellular pathways as well as in deepening our understanding of cellular responses....

  3. Toxicity of heavy metals in the environment

    National Research Council Canada - National Science Library

    Oehme, F.W

    1978-01-01

    ... as the fundamental mechanisms of toxicity resulting from heavy metal chemicals. The more common toxic heavy metals, along with their biochemistry and associated clinical syndromes, are then described...

  4. Production of the 2400 kb Duchenne muscular dystrophy (DMD) gene transcript; transcription time and cotranscriptional splicing

    Energy Technology Data Exchange (ETDEWEB)

    Tennyson, C.N.; Worton, R.G. [Univ. of Toronto and the Hospital for Sick Children, Ontario (Canada)

    1994-09-01

    The largest known gene in any organism is the human DMD gene which has 79 exons that span 2400 kb. The extreme nature of the DMD gene raises questions concerning the time required for transcription and whether splicing begins before transcription is complete. DMD gene transcription is induced as cultured human myoblasts differentiate to form multinucleated myotubes, providing a system for studying the kinetics of transcription and splicing. Using quantitative RT-PCR, transcript accumulation was monitored from four different regions within the gene following induction of expression. By comparing the accumulation of transcripts from the 5{prime} and 3{prime} ends of the gene we have shown that approximately 12 hours are required to transcribe 1770 kb of the gene, extrapolating to a time of 16 hours for the transcription unit expressed in muscle. Comparison of accumulation profiles for spliced and total transcript demonstrated that transcripts are spliced at the 5{prime} end before transcription is complete, providing strong evidence for cotranscriptional splicing of DMD gene transcripts. Finally, the rate of transcript accumulation was reduced at the 3{prime} end of the gene relative to the 5{prime} end, perhaps due to premature termination of transcription complexes as they traverse this enormous transcription unit. The lag between transcription initiation and the appearance of complete transcripts could be important in limiting transcript production in dividing cells and to the timing of mRNA appearance in differentiating muscle.

  5. Mutual interdependence of splicing and transcription elongation.

    Science.gov (United States)

    Brzyżek, Grzegorz; Świeżewski, Szymon

    2015-01-01

    Transcription and splicing are intrinsically linked, as splicing needs a pre-mRNA substrate to commence. The more nuanced view is that the rate of transcription contributes to splicing regulation. On the other hand there is accumulating evidence that splicing has an active role in controlling transcription elongation by DNA-dependent RNA polymerase II (RNAP II). We briefly review those mechanisms and propose a unifying model where splicing controls transcription elongation to provide an optimal timing for successive rounds of splicing.

  6. From heavy nuclei to super-heavy nuclei

    International Nuclear Information System (INIS)

    Theisen, Ch.

    2003-01-01

    The existence of super-heavy nuclei has been predicted nearly fifty years ago. Due to the strong coulomb repulsion, the stabilisation of these nuclei is possible only through shell effects. The reasons for this fragile stability, as well as the theoretical predictions concerning the position of the island of stability are presented in the first part of this lecture. In the second part, experiments and experimental techniques which have been used to synthesize or search for super-heavy elements are described. Spectroscopic studies performed in very heavy elements are presented in the following section. We close this lecture with techniques that are currently being developed in order to reach the superheavy island and to study the structure of very-heavy nuclei. (author)

  7. Heavy Water - Industrial Separation Processes

    International Nuclear Information System (INIS)

    Peculea, M.

    1984-01-01

    This monograph devoted to the heavy water production mainly presents the Romanian experience in the field which started in early sixties from the laboratory scale production and reached now the level of large scale industrial production at ROMAG-Drobeta, Romania. The book is structured in eleven chapters entitled: Overview, The main physical properties, Sources, Uses, Separation factor and equilibrium constant, Mathematical modelling of the separation process, Thermodynamical considerations on the isotope separation, Selection criteria for heavy water separation processes, Industrial installations for heavy water production, Prospects, Acknowledgements. 200 Figs., 90 Tabs., 135 Refs

  8. Interplay between DNA supercoiling and transcription elongation.

    Science.gov (United States)

    Ma, Jie; Wang, Michelle

    2014-01-01

    Transcription-coupled DNA supercoiling has been shown to be an important regulator of transcription that is broadly present in the cell. Here we review experimental work which shows that RNA polymerase is a powerful torsional motor that can alter DNA topology and structure, and DNA supercoiling in turn directly affects transcription elongation.

  9. Heavy quark fragmentation functions in the heavy quark effective theory

    International Nuclear Information System (INIS)

    Martynenko, A.P.; Saleev, V.A.

    1996-01-01

    The fragmentation of b-bar-antiquark into polarized B c * -mesons and b-quark into P-wave (c-bar b) states in the Heavy Quark Effective Theory. The heavy quark fragmentation functions in longitudinally and transversely polarized S-wave b-bar c-states and P-wave mesons containing b-, c-quarks also, with the exact account of corrections of first order in 1/m b . 20 refs., 2 figs

  10. Heavy-element nucleosynthesis

    International Nuclear Information System (INIS)

    Mathews, G.J.

    1990-01-01

    New measurements and theoretical studies of nuclear properties, together with new astronomical data on the growth of heavy-element abundances during the early history of the Galaxy, now provide a clearer picture of where in nature the elements heavier than iron are produced by rapid (r-process) and show (s-process) neutron capture reactions. The nuclear data suggest that the r-process involves a high-neutron-density beta-flow equilibrium environment and that the s-process may have occurred at a temperature and neutron density consistent with a 13 C(α,n) 16 0 neutron source. The astronomical data, when compared with simple galactic chemical evolution modes, suggests that the r-process is associated with type II supernovae and that the neutron source must be manufactured by the star. Low-mass type II supernovae are proposed as the most important contributors to the r-process. A 13 C neutron source in intermediate-mass stars is proposed for the s-process. 64 refs., 7 figs

  11. Heavy ion fusion sources

    International Nuclear Information System (INIS)

    Grote, D.P.; Kwan, J.; Westenskow, G.

    2003-01-01

    In Heavy-Fusion and in other applications, there is a need for high brightness sources with both high current and low emittance. The traditional design with a single monolithic source, while very successful, has significant constraints on it when going to higher currents. With the Child-Langmuir current-density limit, geometric aberration limits, and voltage breakdown limits, the area of the source becomes a high power of the current, A ∼ I 8/3 . We are examining a multi-beamlet source, avoiding the constraints by having many beamlets each with low current and small area. The beamlets are created and initially accelerated separately and then merged to form a single beam. This design offers a number of potential advantages over a monolithic source, such as a smaller transverse footprint, more control over the shaping and aiming of the beam, and more flexibility in the choice of ion sources. A potential drawback, however, is the emittance that results from the merging of the beamlets. We have designed injectors using simulation that have acceptably low emittance and are beginning to examine them experimentally

  12. Heavy fields and gravity

    Energy Technology Data Exchange (ETDEWEB)

    Goon, Garrett [Institute of Physics, Universiteit van Amsterdam,Science Park 904, Amsterdam, 1090 GL (Netherlands)

    2017-01-11

    We study the effects of heavy fields on 4D spacetimes with flat, de Sitter and anti-de Sitter asymptotics. At low energies, matter generates specific, calculable higher derivative corrections to the GR action which perturbatively alter the Schwarzschild-(A)dS family of solutions. The effects of massive scalars, Dirac spinors and gauge fields are each considered. The six-derivative operators they produce, such as ∼R{sup 3} terms, generate the leading corrections. The induced changes to horizon radii, Hawking temperatures and entropies are found. Modifications to the energy of large AdS black holes are derived by imposing the first law. An explicit demonstration of the replica trick is provided, as it is used to derive black hole and cosmological horizon entropies. Considering entropy bounds, it’s found that scalars and fermions increase the entropy one can store inside a region bounded by a sphere of fixed size, but vectors lead to a decrease, oddly. We also demonstrate, however, that many of the corrections fall below the resolving power of the effective field theory and are therefore untrustworthy. Defining properties of black holes, such as the horizon area and Hawking temperature, prove to be remarkably robust against higher derivative gravitational corrections.

  13. Heavy ion elastic scatterings

    International Nuclear Information System (INIS)

    Mermaz, M.C.

    1984-01-01

    Diffraction and refraction play an important role in particle elastic scattering. The optical model treats correctly and simultaneously both phenomena but without disentangling them. Semi-classical discussions in terms of trajectories emphasize the refractive aspect due to the real part of the optical potential. The separation due to to R.C. Fuller of the quantal cross section into two components coming from opposite side of the target nucleus allows to understand better the refractive phenomenon and the origin of the observed oscillations in the elastic scattering angular distributions. We shall see that the real part of the potential is responsible of a Coulomb and a nuclear rainbow which allows to determine better the nuclear potential in the interior region near the nuclear surface since the volume absorption eliminates any effect of the real part of the potential for the internal partial scattering waves. Resonance phenomena seen in heavy ion scattering will be discussed in terms of optical model potential and Regge pole analysis. Compound nucleus resonances or quasi-molecular states can be indeed the more correct and fundamental alternative

  14. Relativistic heavy ion research

    International Nuclear Information System (INIS)

    1992-01-01

    Experimental work is reported on the following topics: transverse energy production in 10.7-GeV/c/u Au on Au collisions; first results on delta ray production and charged particle multiplicities with the Au beam at 10.7 GeV/c/A; preliminary studies on the feasibility of flow measurement with the E814 participant calorimeter; preliminary results from the E877 telescope; and low-p t baryon distribution in Si+Al, Pb collisions at the AGS. Then the status of the Hadronic Calorimeter project of AGS Experiment E864 (ECOS--Exotic Composite Object Spectrometer) is reviewed. Next, the same is done for work of the STAR RHIC collaboration (Silicon Vertex Tracker (SVT) project evolution and development in FY92, SVT software results from 1992, SVT instrumentation, FY93 SVT pion test beam). The instrumentation section deals with the design and installation of a target rapidity telescope for BNL experiment 814/877 and a repair scheme for the E814/E877 participant calorimeter. Finally, the theory part addresses bosonic kinetics: thermalization of mesons and the pion p perpendicular spectrum in ultrarelativistic heavy-ion collisions and non-equilibrium properties of hadronic mixtures

  15. Heavy quarks and leptons

    International Nuclear Information System (INIS)

    Azimov, Ya.I.; Khoze, V.A.

    1979-01-01

    Experimental results which proved the reality of quarks are reviewed along with further experiments broadening the representation of quarks and leptons and providing the basis to develop the theory of elementary particles. The discovery of the J/psi particle is noted to give rise to the discovery of c-quark, the existance of which is confirmed by the discovery of charmed hadrons. The main aspects of quantum chromodynamics explaining the mechanism of strong interaction of quarks are considered along with those of the Weinberg-Salam theory proposed to describe weak and electromagnetic interactions of quarks and leptons. Experimental data testifying to the existance of heavy tausup(+-) leptons are presented. The history of discovery of γ mesons and of a new heavier b-quark is described. Perspectives for studying elementary particles are discussed. Further studies of γ mesons, discovery and investigation of charmed particles are noted to be immediate tasks along with the search for manifestation of t-quark considered to be a partner of b-quark from the viewpoint of the Weinberg-Salam model

  16. Heavy particle effects

    International Nuclear Information System (INIS)

    Yao, Y.P.

    1981-01-01

    There are two problems discussed, both of which have to do with dissimilar magnitudes in mass. Theoretically, we can devise the large difference in mass as observed by decreeing some vev, v/sub i/ to be much bigger than the other; or, we can assume that some couplings g/sub i/ are much stronger. These two different assumptions give rise to entirely different patterns of interaction in the resulting theory. The first way to generate a mass hierarchy can be called the soft way, because in the zeroth order, the large mass scale leaves its foot print merely in a few effective parameters of the residual theory. The effective theory is renormalizable, sans anomaly. In this limit, the heavy particles decouple. The second assumption (g/sub j/ much greater than g/sub j'/) to create mass hierarchy does a lot of violence to a theory. Effects of the large mass scale will be felt by the system left behind in many ways. An infinite number of parameters are needed to summarize the effects in this limit. This is called the hard limit. It follows that the resulting effective Lagrangian, if in fact it makes sense to construct one at all, will be non-polynomial and apparently non-renormalizable

  17. Heavy Flavor Production in Heavy Ion Collisions at CMS

    CERN Document Server

    Sun, Jian

    2016-01-01

    Studies of Heavy flavor production are of great interest in heavy ion collisions. In the produced medium, the binding potential between a quark and antiquark in quarkonium is screened by surrounding light quarks and antiquarks. Thus, the various quarkonium states are expected to be melt at different temperatures depending on their binding energies, which allows us to characterize the QCD phase transition. In addition, open heavy flavor production are relevant for flavor-dependence of the in-medium parton energy loss. In QCD, gluons are expected to lose more energy compared to quarks when passing through the QGP due to the larger color charge. Compared to light quarks, heavy quarks are expected to lose less radiative energy because gluon radiation is suppressed at angles smaller than the ratio of the quark mass to its energy. This dead cone effect (and its disappearance at high transverse momentum) can be studied using open heavy flavor mesons and heavy flavor tagged jets. With CMS detector, quarkonia, open he...

  18. Immunoglobulin heavy chain exclusion in the shark.

    Directory of Open Access Journals (Sweden)

    Karolina Malecek

    2008-06-01

    Full Text Available The adaptive immune system depends on specific antigen receptors, immunoglobulins (Ig in B lymphocytes and T cell receptors (TCR in T lymphocytes. Adaptive responses to immune challenge are based on the expression of a single species of antigen receptor per cell; and in B cells, this is mediated in part by allelic exclusion at the Ig heavy (H chain locus. How allelic exclusion is regulated is unclear; we considered that sharks, the oldest vertebrates possessing the Ig/TCR-based immune system, would yield insights not previously approachable and reveal the primordial basis of the regulation of allelic exclusion. Sharks have an IgH locus organization consisting of 15-200 independently rearranging miniloci (VH-D1-D2-JH-Cmu, a gene organization that is considered ancestral to the tetrapod and bony fish IgH locus. We found that rearrangement takes place only within a minilocus, and the recombining gene segments are assembled simultaneously and randomly. Only one or few H chain genes were fully rearranged in each shark B cell, whereas the other loci retained their germline configuration. In contrast, most IgH were partially rearranged in every thymocyte (developing T cell examined, but no IgH transcripts were detected. The distinction between B and T cells in their IgH configurations and transcription reveals a heretofore unsuspected chromatin state permissive for rearrangement in precursor lymphocytes, and suggests that controlled limitation of B cell lineage-specific factors mediate regulated rearrangement and allelic exclusion. This regulation may be shared by higher vertebrates in which additional mechanistic and regulatory elements have evolved with their structurally complex IgH locus.

  19. Selective activation of human heat shock gene transcription by nitrosourea antitumor drugs mediated by isocyanate-induced damage and activation of heat shock transcription factor.

    Science.gov (United States)

    Kroes, R A; Abravaya, K; Seidenfeld, J; Morimoto, R I

    1991-01-01

    Treatment of cultured human tumor cells with the chloroethylnitrosourea antitumor drug 1,3-bis(2-chloroethyl)-1-nitrosourea (BCNU) selectively induces transcription and protein synthesis of a subset of the human heat shock or stress-induced genes (HSP90 and HSP70) with little effect on other stress genes or on expression of the c-fos, c-myc, or beta-actin genes. The active component of BCNU and related compounds appears to be the isocyanate moiety that causes carbamoylation of proteins and nucleic acids. Transcriptional activation of the human HSP70 gene by BCNU is dependent on the heat shock element and correlates with the level of heat shock transcription factor and its binding to the heat shock element in vivo. Unlike activation by heat or heavy metals, BCNU-mediated activation is strongly dependent upon new protein synthesis. This suggests that BCNU-induced, isocyanate-mediated damage to newly synthesized protein(s) may be responsible for activation of the heat shock transcription factor and increased transcription of the HSP90 and HSP70 genes. Images PMID:2052560

  20. Directing traffic on DNA-How transcription factors relieve or induce transcriptional interference.

    Science.gov (United States)

    Hao, Nan; Palmer, Adam C; Dodd, Ian B; Shearwin, Keith E

    2017-03-15

    Transcriptional interference (TI) is increasingly recognized as a widespread mechanism of gene control, particularly given the pervasive nature of transcription, both sense and antisense, across all kingdoms of life. Here, we discuss how transcription factor binding kinetics strongly influence the ability of a transcription factor to relieve or induce TI.

  1. Heavy quark and magnetic moment

    International Nuclear Information System (INIS)

    Mubarak, Ahmad; Jallu, M.S.

    1979-01-01

    The magnetic moments and transition moments of heavy hadrons including the conventional particles are obtained under the SU(5) truth symmetry scheme. To this end state vectors are defined and the quark additivity principle is taken into account. (author)

  2. Heavy flavour production at LHCb

    CERN Document Server

    Barsuk, Sergey

    2016-01-01

    The present write-up reports recent LHCb results on production of quarkonium and open flavour states, as well as selected results on associated production, central exclusive production and pro- duction in heavy ion collisions.

  3. Principles of heavy oil recovery

    Energy Technology Data Exchange (ETDEWEB)

    Szasz, S.E.; Thomas, G.W.

    1965-10-01

    Rising exploration costs have prompted greater interest in the large known deposits of heavy oil in North America. Because of high oil viscosities in such reservoirs, recoveries are poor, fluid drives are inefficient and production rates are uneconomical. Viscosity reduction can best be accomplished by heating the reservoir. The basic aspects of reservoir heating are reviewed and those processes which are of practical importance in heavy oil reservoirs are discussed. Wellbore heating frequently can be applied to heavy oil reservoirs to increase production rates. In hot waterflooding, the water requirements are much higher than an ordinary waterflood. Steam floods are more attractive, but operating costs are generally high. Conduction heating processes appear most promising. Among these is included the cyclic steam-soak process. A simple method is presented for estimating the performance from the first cycle of steam injection into the formation, assuming gravity as the only driving energy. An example calculation for a typical heavy oil reservoir is given. (26 refs.)

  4. The Canadian heavy water situation

    International Nuclear Information System (INIS)

    Dahlinger, A.

    The Canadian heavy water industry is analyzed. Supply and demand are predicted through 1985. Pricing is broken down into components. Backup R and D contributes greatly to process improvements. (E.C.B.)

  5. Heavy quark spectroscopy and decay

    International Nuclear Information System (INIS)

    Schindler, R.H.

    1987-01-01

    The understanding of q anti q systems containing heavy, charmed, and bottom quarks has progressed rapidly in recent years, through steady improvements in experimental techniques for production and detection of their decays. These lectures are meant to be an experimentalist's review of the subject. In the first of two lectures, the existing data on the spectroscopy of the bound c anti c and b anti b systems will be discussed. Emphasis is placed on comparisons with the theoretical models. The second lecture covers the rapidly changing subject of the decays of heavy mesons (c anti q and b anti q), and their excited states. In combination, the spectroscopy and decays of heavy quarks are shown to provide interesting insights into both the strong and electroweak interactions of the heavy quarks. 103 refs., 39 figs

  6. Heavy Metal Stars

    Science.gov (United States)

    2001-08-01

    La Silla Telescope Detects Lots of Lead in Three Distant Binaries Summary Very high abundances of the heavy element Lead have been discovered in three distant stars in the Milky Way Galaxy . This finding strongly supports the long-held view that roughly half of the stable elements heavier than Iron are produced in common stars during a phase towards the end of their life when they burn their Helium - the other half results from supernova explosions. All the Lead contained in each of the three stars weighs about as much as our Moon. The observations show that these "Lead stars" - all members of binary stellar systems - have been more enriched with Lead than with any other chemical element heavier than Iron. This new result is in excellent agreement with predictions by current stellar models about the build-up of heavy elements in stellar interiors. The new observations are reported by a team of Belgian and French astronomers [1] who used the Coude Echelle Spectrometer on the ESO 3.6-m telescope at the La Silla Observatory (Chile). PR Photo 26a/01 : A photo of HD 196944 , one of the "Lead stars". PR Photo 26b/01 : A CES spectrum of HD 196944 . The build-up of heavy elements Astronomers and physicists denote the build-up of heavier elements from lighter ones as " nucleosynthesis ". Only the very lightest elements (Hydrogen, Helium and Lithium [2]) were created at the time of the Big Bang and therefore present in the early universe. All the other heavier elements we now see around us were produced at a later time by nucleosynthesis inside stars. In those "element factories", nuclei of the lighter elements are smashed together whereby they become the nuclei of heavier ones - this process is known as nuclear fusion . In our Sun and similar stars, Hydrogen is being fused into Helium. At some stage, Helium is fused into Carbon, then Oxygen, etc. The fusion process requires positively charged nuclei to move very close to each other before they can unite. But with increasing

  7. Exotic heavy baryons at LHC

    International Nuclear Information System (INIS)

    Biro, T.S.; Zimanyi, J.

    1993-06-01

    A heavy bottom-charm six-quark baryon is considered. A semiclassical and a Gaussian estimate show that the octet-octet bbb-ccc configuration can be favoured energetically rather than the singlet-singlet one. This result suggests that a confined bbb-ccc six-quark state may exist. Such objects may be produced in suitable amounts by heavy-ion collisions at Large Hadronic Collider energies. (R.P.) 8 refs. 1 fig

  8. Heavy leptons at hadron colliders

    International Nuclear Information System (INIS)

    Ohnemus, J.E.

    1987-01-01

    The recent advent of high energy hadron colliders capable of producing weak bosons has opened new vistas for particle physics research, including the search for a possible fourth generation heavy charged lepton, which is the primary topic of the thesis. Signals for identifying a new heavy lepton have been calculated and compared to Standard Model backgrounds. Results are presented for signals at the CERN collider, the Fermilab collider, and the proposed Superconducting Supercollider

  9. Heavy Ion Physics at LHC

    CERN Document Server

    Valenti, G.

    2002-01-01

    The study of heavy ion interactions constitutes an important part of the experimental program outlined for the Large Hadron Collider under construction at CERN and expected to be operational by 2006. ALICE 1 is the single detector having the capabilities to explore at the same time most of the characteristics of high energy heavy ion interactions. Specific studies of jet quenching and quarkonia production, essentially related to µ detection are also planned by CMS 2 .

  10. BNL heavy ion fusion program

    International Nuclear Information System (INIS)

    Maschke, A.W.

    1978-01-01

    A principal attraction of heavy ion fusion is that existing accelerator technology and theory are sufficiently advanced to allow one to commence the design of a machine capable of igniting thermonuclear explosions. There are, however, a number of features which are not found in existing accelerators built for other purposes. The main thrust of the BNL Heavy Ion Fusion program has been to explore these features. Longitudinal beam bunching, very low velocity acceleration, and space charge neutralization are briefly discussed

  11. The Canadian heavy water situation

    International Nuclear Information System (INIS)

    Dahlinger, A.

    1975-08-01

    Existing heavy water plants in Canada are producing at a satisfactory rate and currently planned capacity is in balance with projected needs. By 1980, we shall have Girdler-Sulphide plants installed with a design capacity of almost 600 kg/h. Effort is required to minimize production costs for heavy water and to ensure that costs do not increase faster than the current inflationary trend. (Author)

  12. Phenomenology of heavy quark systems

    International Nuclear Information System (INIS)

    Gilman, F.J.

    1987-03-01

    The spectroscopy of heavy quark systems is examined with regards to spin independent and spin dependent potentials. It is shown that a qualitative picture exists of the spin-independent forces, and that a semi-quantitative understanding exists for the spin-dependent effects. A brief review is then given of the subject of the decays of hadrons containing heavy quarks, including weak decays at the quark level, and describing corrections to the spectator model

  13. Heavy ion medical accelerator, HIMAC

    International Nuclear Information System (INIS)

    Yamada, Satoru

    1993-01-01

    The heavy ion beam is undoutedly suitable for the cancer treatment. The supriority of the heavy ions over the conventional radiations including protons and neutrons comes mainly from physical characteristics of a heavy particle with multiple charges. A straggling angle due to a multiple Coulomb scattering process in a human body is small for heavy ions, and the small scattering angle results in a good dose localization in a transverse direction. An ionization ratio of the heavy ion beam makes a very sharp peak at the ends of their range. The height of the peak is higher for the heavier ions and shows excellent biomedical effects around Ne ions. In order to apply heavy ion beams to cancer treatment, Heavy Ion Medical Accelerator in Chiba (HIMAC) has been constructed at National Institute of Radiological Sciences. The accelerator complex consists of two ion sources, two successive linac tanks, a pair of synchrotron rings, a beam transport system and an irradiation system. An operation frequency is 100 MHz for two linacs, and the ion energy is 6.0 MeV/u at the output end of the linac. The other four experimental rooms are prepared for basic experiments. The synchrotron accelerates ions up to 800 MeV/u for a charge to mass ratio of 1/2. The long beam transport line provides two vertical beams in addition with two horizontal beams for the treatment. The three treatment rooms are prepared one of which is equipped with both horizontal and vertical beam lines. The whole facility will be open for all scientists who have interests in the heavy ion science as well as the biophysics. The conceptual design study of HIMAC started in 1984, and the construction of the accelerator complex was begun in March 1988. The beam acceleration tests of the injector system was successfully completed in March of this year, and tests of the whole system will be finished throughout this fyscal year. (author)

  14. Status of Heavy Neutrino Experiments

    CERN Document Server

    Wynne, Benjamin; The ATLAS collaboration

    2017-01-01

    The observation of neutrino oscillations raises the possibility that there exist additional, undiscovered high-mass neutrinos, giving mass to Standard Model neutrinos via the seesaw mechanism. By pushing the collider energy frontier at the LHC, the possibility arises that these heavy neutrinos may be produced and identified. We summarise the latest LHC results of searches for heavy neutrinos in a variety of final states.

  15. The Journey of a Transcription Factor

    DEFF Research Database (Denmark)

    Pireyre, Marie

    Plants have developed astonishing networks regulating their metabolism to adapt to their environment. The complexity of these networks is illustrated by the expansion of families of regulators such as transcription factors in the plant kingdom. Transcription factors specifically impact...... transcriptional networks by integrating exogenous and endogenous stimuli and regulating gene expression accordingly. Regulation of transcription factors and their activation is thus highly important to modulate the transcriptional programs and increase fitness of the plant in a given environment. Plant metabolism....... The biosynthetic machinery of GLS is governed by interplay of six MYB and three bHLH transcription factors. MYB28, MYB29 and MYB76 regulate methionine-derived GLS, and MYB51, MYB34 and MYB122 regulate tryptophan-derived GLS. The three bHLH transcription factors MYC2, MYC3 and MYC4 physically interact with all six...

  16. Heavy metal tolerance in plants: Role of transcriptomics, proteomics, metabolomics and ionomics

    Directory of Open Access Journals (Sweden)

    Samiksha eSingh

    2016-02-01

    Full Text Available Heavy metal contamination of soil and water causing toxicity/stress has become one important constraint to crop productivity and quality. This situation has further worsened by the increasing population growth and inherent food demand. It have been reported in several studies that counterbalancing toxicity, due to heavy metal requires complex mechanisms at molecular, biochemical, physiological, cellular, tissue and whole plant level, which might manifest in terms of improved crop productivity. Recent advances in various disciplines of biological sciences such as metabolomics, transcriptomics, proteomics etc. have assisted in the characterization of metabolites, transcription factors, stress-inducible proteins involved in heavy metal tolerance, which in turn can be utilized for generating heavy metal tolerant crops. This review summarizes various tolerance strategies of plants under heavy metal toxicity, covering the role of metabolites (metabolomics, trace elements (ionomics, transcription factors (transcriptomics, various stress-inducible proteins (proteomics as well as the role of plant hormones. We also provide a glance at strategies adopted by metal accumulating plants also known as metallophytes.

  17. Heavy Metal Tolerance in Plants: Role of Transcriptomics, Proteomics, Metabolomics, and Ionomics

    Science.gov (United States)

    Singh, Samiksha; Parihar, Parul; Singh, Rachana; Singh, Vijay P.; Prasad, Sheo M.

    2016-01-01

    Heavy metal contamination of soil and water causing toxicity/stress has become one important constraint to crop productivity and quality. This situation has further worsened by the increasing population growth and inherent food demand. It has been reported in several studies that counterbalancing toxicity due to heavy metal requires complex mechanisms at molecular, biochemical, physiological, cellular, tissue, and whole plant level, which might manifest in terms of improved crop productivity. Recent advances in various disciplines of biological sciences such as metabolomics, transcriptomics, proteomics, etc., have assisted in the characterization of metabolites, transcription factors, and stress-inducible proteins involved in heavy metal tolerance, which in turn can be utilized for generating heavy metal-tolerant crops. This review summarizes various tolerance strategies of plants under heavy metal toxicity covering the role of metabolites (metabolomics), trace elements (ionomics), transcription factors (transcriptomics), various stress-inducible proteins (proteomics) as well as the role of plant hormones. We also provide a glance of some strategies adopted by metal-accumulating plants, also known as “metallophytes.” PMID:26904030

  18. Repression of Meiotic Genes by Antisense Transcription and by Fkh2 Transcription Factor in Schizosaccharomyces pombe

    OpenAIRE

    Chen, Huei-Mei; Rosebrock, Adam P.; Khan, Sohail R.; Futcher, Bruce; Leatherwood, Janet K.

    2012-01-01

    In S. pombe, about 5% of genes are meiosis-specific and accumulate little or no mRNA during vegetative growth. Here we use Affymetrix tiling arrays to characterize transcripts in vegetative and meiotic cells. In vegetative cells, many meiotic genes, especially those induced in mid-meiosis, have abundant antisense transcripts. Disruption of the antisense transcription of three of these mid-meiotic genes allowed vegetative sense transcription. These results suggest that antisense transcription ...

  19. The heavy quark expansion of QCD

    International Nuclear Information System (INIS)

    Falk, A.F.

    1997-01-01

    These lectures contain an elementary introduction to heavy quark symmetry and the heavy quark expansion. Applications such as the expansion of heavy meson decay constants and the treatment of inclusive and exclusive semileptonic B decays are included. Heavy hadron production via nonperturbative fragmentation processes is also discussed. 54 refs., 7 figs

  20. The heavy quark expansion of QCD

    Energy Technology Data Exchange (ETDEWEB)

    Falk, A.F. [Johns Hopkins Univ., Baltimore, MD (United States). Dept. of Physics and Astronomy

    1997-06-01

    These lectures contain an elementary introduction to heavy quark symmetry and the heavy quark expansion. Applications such as the expansion of heavy meson decay constants and the treatment of inclusive and exclusive semileptonic B decays are included. Heavy hadron production via nonperturbative fragmentation processes is also discussed. 54 refs., 7 figs.

  1. Hydroponic screening of black locust families for heavy metal tolerance and accumulation.

    Science.gov (United States)

    Župunski, Milan; Borišev, Milan; Orlović, Saša; Arsenov, Danijela; Nikolić, Nataša; Pilipović, Andrej; Pajević, Slobodanka

    2016-01-01

    Present work examines phytoextraction potential of four black locust families (half-sibs 54, 56, 115, and 135) grown hydroponically. Plants were treated with 6 ppm of cadmium (Cd), 100 ppm of nickel (Ni), and 40 ppm of lead (Pb) added in Hoagland nutrient solution, accompanying with simultaneously applied all three metals. Responses to metals exposure among families were different, ranging from severe to slight reduction of root and shoot biomass production of treated plants. Calculated tolerance indices are indicating tested families as highly tolerant (Ti > 60). Family 135 had the lowest tolerance index, pointing that it was highly susceptible to applied metals. Comparing photosynthetic activities of tested families it has been noticed that they were highly sensitive to stress induced by heavy metals. Net photosynthetic rate of nickel treated plants was the most affected by applied concentration. Cadmium and nickel concentrations in stems and leaves of black locust families exceeded 100 mg Cd kg(-1) and 1000 mg Ni kg(-1), in both single and multipollution context. On the contrary, accumulation of lead in above ground biomass was highly affected by multipollution treatment. Tf and BCF significantly varied between investigated treatments and families of black locust. Concerning obtained results of heavy metals accumulation and tolerance of black locust families can be concluded that tested families might be a promising tool for phytoextraction purposes, but it takes to be further confirmed in field trials.

  2. Heavy Flavor Physics in Heavy-Ion Collisions with STAR Heavy Flavor Tracker

    International Nuclear Information System (INIS)

    Yifei Zhang

    2010-01-01

    Heavy quarks are a unique tool to probe the strongly interacting matter created in relativistic heavy-ion collisions at RHIC energies. Due to their large mass, energetic heavy quarks are predicted to lose less energy than light quarks by gluon radiation when they traverse a Quark-Gluon Plasma. In contrast, recent measurements of non-photonic electrons from heavy quark decays at high transverse momentum (p T ) show a jet quenching level similar to that of the light hadrons. Heavy quark are produced mainly at early stage in heavy-ion collisions, thus they are proposed to probe the QCD medium and to be sensitive to bulk medium properties. Ultimately, their flow behavior may help establish whether light quarks thermalize. But due to the absence of the measurement of B-mesons and precise measurement of D-mesons, it is difficult to separate bottom and charm contributions experimentally in current non-photonic electron measurements for both spectra and elliptic flow v 2 . Therefore, topological reconstruction of D-mesons and identification of electrons from charm and bottom decays are crucial to understand the heavy flavor production and their in medium properties. The Heavy Flavor Tracker (HFT) is a micro-vertex detector utilizing active pixel sensors and silicon strip technology. The HFT will significantly extend the physics reach of the STAR experiment for precise measurement of charmed and bottom hadrons. We present a study on the open charm nuclear modification factor, elliptic flow v 2 and λ c measurement as well as the measurement of bottom mesons via a semi-leptonic decay. (author)

  3. Suppression and Two-Particle Correlations of Heavy Mesons in Heavy-Ion Collisions

    Energy Technology Data Exchange (ETDEWEB)

    Cao, Shanshan [Nuclear Science Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720 (United States); Qin, Guang-You [Institute of Particle Physics and Key Laboratory of Quark and Lepton Physics (MOE), Central China Normal University, Wuhan, 430079 (China); Bass, Steffen A. [Department of Physics, Duke University, Durham, NC 27708 (United States)

    2016-12-15

    We study the medium modification of heavy quarks produced in heavy-ion collisions. The evolution of heavy quarks inside the QGP is described using a modified Langevin framework that simultaneously incorporates their collisional and radiative energy loss. Within this framework, we provide good descriptions of the heavy meson suppression and predictions for the two-particle correlation functions of heavy meson pairs.

  4. Effect of heavy metals on nitrification activity as measured by RNA- and DNA-based function-specific assays

    Science.gov (United States)

    Heavy metals can inhibit nitrification, a key process for nitrogen removal in wastewater treatment. The transcriptional responses of functional genes (amoA, hao, nirK and norB) were measured in conjunction with specific oxygen uptake rate (sOUR) for nitrifying enrichment cultures...

  5. Heavy quark photoproduction in ultraperipheral heavy ion collisions

    International Nuclear Information System (INIS)

    Klein, Spencer R.; Nystrand, Joakim; Vogt, Ramona

    2002-01-01

    Heavy quarks are copiously produced in ultraperipheral heavy ion collisions. In the strong electromagnetic fields, cc-bar and bb-bar are produced by photonuclear and two-photon interactions. Hadroproduction can also occur in grazing interactions. We calculate the total cross sections and the quark transverse momentum and rapidity distributions, as well as the QQ-bar invariant mass spectra from the three production channels. We consider AA and pA collisions at the Relativistic Heavy Ion Collider and the Large Hadron Collider. We discuss techniques for separating the three processes and describe how the AA to pA production ratios might be measured accurately enough to study nuclear shadowing

  6. Mitotic Transcriptional Activation: Clearance of Actively Engaged Pol II via Transcriptional Elongation Control in Mitosis.

    Science.gov (United States)

    Liang, Kaiwei; Woodfin, Ashley R; Slaughter, Brian D; Unruh, Jay R; Box, Andrew C; Rickels, Ryan A; Gao, Xin; Haug, Jeffrey S; Jaspersen, Sue L; Shilatifard, Ali

    2015-11-05

    Although it is established that some general transcription factors are inactivated at mitosis, many details of mitotic transcription inhibition (MTI) and its underlying mechanisms are largely unknown. We have identified mitotic transcriptional activation (MTA) as a key regulatory step to control transcription in mitosis for genes with transcriptionally engaged RNA polymerase II (Pol II) to activate and transcribe until the end of the gene to clear Pol II from mitotic chromatin, followed by global impairment of transcription reinitiation through MTI. Global nascent RNA sequencing and RNA fluorescence in situ hybridization demonstrate the existence of transcriptionally engaged Pol II in early mitosis. Both genetic and chemical inhibition of P-TEFb in mitosis lead to delays in the progression of cell division. Together, our study reveals a mechanism for MTA and MTI whereby transcriptionally engaged Pol II can progress into productive elongation and finish transcription to allow proper cellular division. Copyright © 2015 Elsevier Inc. All rights reserved.

  7. Multiple post-transcriptional regulatory mechanisms in ferritin gene expression

    International Nuclear Information System (INIS)

    Mattia, E.; Den Blaauwen, J.; Van Renswoude, J.; Ashwell, G.

    1989-01-01

    The authors have investigated the mechanisms involved in the regulation of ferritin biosynthesis in K562 human erythroleukemia cells during prolonged exposure to iron. They show that, upon addition of hemin (an efficient iron donor) to the cell culture, the rate of ferritin biosynthesis reaches a maximum after a few hours and then decreases. During a 24-hr incubation with the iron donor the concentrations of total ferritin heavy (H) and light (L) subunit mRNAs rise 2- to 5-fold and 2- to 3-fold, respectively, over the control values, while the amount of the protein increases 10- to 30-fold. The hemin-induced increment in ferritin subunit mRNA is not prevented by deferoxamine, suggesting that it is not directly mediated by chelatable iron. In vitro nuclear transcription analyses performed on nuclei isolated from control cells and cells grown in the presence of hemin indicate that the rates of synthesis of H- and L-subunit mRNAs remain constant. They conclude that iron-induced ferritin biosynthesis is governed by multiple post-transcriptional regulatory mechanisms. They propose that exposure of cells to iron leads to stabilization of ferritin mRNAs, in addition to activation and translation of stored H-and L-subunit mRNAs

  8. Heavy ion fusion- Using heavy ions to make electricity

    International Nuclear Information System (INIS)

    Celata, C.M.

    2004-01-01

    The idea of using nuclear fusion as a source of commercial electrical power has been pursued worldwide since the 1950s. Two approaches, using magnetic and inertial confinement of the reactants, are under study. This paper describes the difference between the two approaches, and discusses in more detail the heavy-ion-driven inertial fusion concept. A multibeam induction linear accelerator would be used to bring ∼100 heavy ion beams to a few GeV. The beams would then heat and compress a target of solid D-T. This approach is unique among fusion concepts in its ability to protect the reaction chamber wall from neutrons and debris

  9. Role of OsWAK124, a rice wall-associated kinase, in response to environmental heavy metal stresses

    International Nuclear Information System (INIS)

    Yin, X.; Hou, X.

    2017-01-01

    Members of the Arabidopsis cell wall-associated kinase (WAK) family play important roles in both development and stress responses. There are about one hundred and twenty five OsWAKs annotated in the rice genome but their functions in rice growth and development are largely unknown. In this paper, we reported a functional role of the OsWAK124 (Os12g0266200) in rice heavy metal responses. Confocal GFP experiments located OsWAK124 in the cell wall and analyses of OsWAK124 promoter GUS transgenic lines suggested that OsWAK124 promoter is primarily active at the meristematic tissues under normal growth condition. Under stress conditions, however, OsWAK124 promoter activity is induced in non-meristematic tissues, such as leaf, stem and root, and the activity in the meristematic tissues is further enhanced. Various transgenic rice lines carrying either RNA interference (RNAi) or overexpression constructs were generated. Transgenic lines were tested for their responses to various stress conditions including salicylic acid, NaCl, AlCl/sub 3/, CuSO/sub 4/ and CdSO/sub 4/. Our analyses showed that rice seedlings overexpressing OsWAK124 are more resistant to the three tested heavy metals (Al, Cu, and Cd), which suggested that OsWAK124, like some Arabidopsis WAK members, plays a role in environmental heavy metal stress responses. (author)

  10. Promoter proximal polyadenylation sites reduce transcription activity

    DEFF Research Database (Denmark)

    Andersen, Pia Kjølhede; Lykke-Andersen, Søren; Jensen, Torben Heick

    2012-01-01

    Gene expression relies on the functional communication between mRNA processing and transcription. We previously described the negative impact of a point-mutated splice donor (SD) site on transcription. Here we demonstrate that this mutation activates an upstream cryptic polyadenylation (CpA) site......, which in turn causes reduced transcription. Functional depletion of U1 snRNP in the context of the wild-type SD triggers the same CpA event accompanied by decreased RNA levels. Thus, in accordance with recent findings, U1 snRNP can shield premature pA sites. The negative impact of unshielded pA sites...... on transcription requires promoter proximity, as demonstrated using artificial constructs and supported by a genome-wide data set. Importantly, transcription down-regulation can be recapitulated in a gene context devoid of splice sites by placing a functional bona fide pA site/transcription terminator within ∼500...

  11. Transcription and recombination: when RNA meets DNA.

    Science.gov (United States)

    Aguilera, Andrés; Gaillard, Hélène

    2014-08-01

    A particularly relevant phenomenon in cell physiology and proliferation is the fact that spontaneous mitotic recombination is strongly enhanced by transcription. The most accepted view is that transcription increases the occurrence of double-strand breaks and/or single-stranded DNA gaps that are repaired by recombination. Most breaks would arise as a consequence of the impact that transcription has on replication fork progression, provoking its stalling and/or breakage. Here, we discuss the mechanisms responsible for the cross talk between transcription and recombination, with emphasis on (1) the transcription-replication conflicts as the main source of recombinogenic DNA breaks, and (2) the formation of cotranscriptional R-loops as a major cause of such breaks. The new emerging questions and perspectives are discussed on the basis of the interference between transcription and replication, as well as the way RNA influences genome dynamics. Copyright © 2014 Cold Spring Harbor Laboratory Press; all rights reserved.

  12. Specificity and robustness in transcription control networks.

    Science.gov (United States)

    Sengupta, Anirvan M; Djordjevic, Marko; Shraiman, Boris I

    2002-02-19

    Recognition by transcription factors of the regulatory DNA elements upstream of genes is the fundamental step in controlling gene expression. How does the necessity to provide stability with respect to mutation constrain the organization of transcription control networks? We examine the mutation load of a transcription factor interacting with a set of n regulatory response elements as a function of the factor/DNA binding specificity and conclude on theoretical grounds that the optimal specificity decreases with n. The predicted correlation between variability of binding sites (for a given transcription factor) and their number is supported by the genomic data for Escherichia coli. The analysis of E. coli genomic data was carried out using an algorithm suggested by the biophysical model of transcription factor/DNA binding. Complete results of the search for candidate transcription factor binding sites are available at http://www.physics.rockefeller.edu/~boris/public/search_ecoli.

  13. Heavy ion collisions and cosmology

    Energy Technology Data Exchange (ETDEWEB)

    Floerchinger, Stefan

    2016-12-15

    There are interesting parallels between the physics of heavy ion collisions and cosmology. Both systems are out-of-equilibrium and relativistic fluid dynamics plays an important role for their theoretical description. From a comparison one can draw interesting conclusions for both sides. For heavy ion physics it could be rewarding to attempt a theoretical description of fluid perturbations similar to cosmological perturbation theory. In the context of late time cosmology, it could be interesting to study dissipative properties such as shear and bulk viscosity and corresponding relaxation times in more detail. Knowledge and experience from heavy ion physics could help to constrain the microscopic properties of dark matter from observational knowledge of the cosmological fluid properties.

  14. Heavy resistance training and lymphedema

    DEFF Research Database (Denmark)

    Bloomquist, Kira; Karlsmark, Tonny; Christensen, Karl Bang

    2014-01-01

    BACKGROUND: There is limited knowledge regarding progressive resistance training during adjuvant chemotherapy and the risk of developing breast cancer-related lymphedema (BCRL). Furthermore, no studies have investigated the safety of resistance training with heavy loads (> 80% 1 repetition maximum......) in this population. 'Body and Cancer' is a six-week, nine-hour weekly, supervised, multimodal exercise intervention utilizing progressive resistance training with heavy loads for cancer patients undergoing chemotherapy. The purpose of the present study was to estimate the prevalence of BCRL in former participants......, and identify associations between progressive resistance training with heavy loads, and the development of BCRL. MATERIAL AND METHODS: This was a descriptive study. POPULATION: Women treated for breast cancer (n = 149), who had participated in the 'Body and Cancer' exercise intervention between 1 January 2010...

  15. Swift Heavy Ions in Matter

    Science.gov (United States)

    Rothard, Hermann; Severin, Daniel; Trautmann, Christina

    2015-12-01

    The present volume contains the proceedings of the Ninth International Symposium on Swift Heavy Ions in Matter (SHIM). This conference was held in Darmstadt, from 18 to 21 May 2015. SHIM is a triennial series, which started about 25 years ago by a joint initiative of CIRIL - Caen and GSI - Darmstadt, with the aim of promoting fundamental and applied interdisciplinary research in the field of high-energy, heavy-ion interaction processes with matter. SHIM was successively organized in Caen (1989), Bensheim (1992), Caen (1995), Berlin (1998), Catania (2002), Aschaffenburg (2005), Lyon (2008), and Kyoto (2012). The conference attracts scientists from many different fields using high-energy heavy ions delivered by large accelerator facilities and characterized by strong and short electronic excitations.

  16. Transcriptional networks and chromatin remodeling controlling adipogenesis

    DEFF Research Database (Denmark)

    Siersbæk, Rasmus; Nielsen, Ronni; Mandrup, Susanne

    2012-01-01

    Adipocyte differentiation is tightly controlled by a transcriptional cascade, which directs the extensive reprogramming of gene expression required to convert fibroblast-like precursor cells into mature lipid-laden adipocytes. Recent global analyses of transcription factor binding and chromatin...... remodeling have revealed 'snapshots' of this cascade and the chromatin landscape at specific time-points of differentiation. These studies demonstrate that multiple adipogenic transcription factors co-occupy hotspots characterized by an open chromatin structure and specific epigenetic modifications....... Such transcription factor hotspots are likely to represent key signaling nodes which integrate multiple adipogenic signals at specific chromatin sites, thereby facilitating coordinated action on gene expression....

  17. Weak decays of heavy quarks

    International Nuclear Information System (INIS)

    Gaillard, M.K.

    1978-08-01

    The properties that may help to identify the two additional quark flavors that are expected to be discovered. These properties are lifetime, branching ratios, selection rules, and lepton decay spectra. It is also noted that CP violation may manifest itself more strongly in heavy particle decays than elsewhere providing a new probe of its origin. The theoretical progress in the understanding of nonleptonic transitions among lighter quarks, nonleptonic K and hyperon decay amplitudes, omega minus and charmed particle decay predictions, and lastly the Kobayashi--Maskawa model for the weak coupling of heavy quarks together with the details of its implications for topology and bottomology are treated. 48 references

  18. Relativistic heavy ion facilities: worldwide

    International Nuclear Information System (INIS)

    Schroeder, L.S.

    1986-05-01

    A review of relativistic heavy ion facilities which exist, are in a construction phase, or are on the drawing boards as proposals is presented. These facilities span the energy range from fixed target machines in the 1 to 2 GeV/nucleon regime, up to heavy ion colliders of 100 GeV/nucleon on 100 GeV/nucleon. In addition to specifying the general features of such machines, an outline of the central physics themes to be carried out at these facilities is given, along with a sampling of the detectors which will be used to extract the physics. 22 refs., 17 figs., 3 tabs

  19. Heavy consumption and drink driving

    DEFF Research Database (Denmark)

    Fynbo, Lars

    2010-01-01

    This paper is part of an ongoing mixed methods project about untreated heavy alcohol consumption amongst adult Danes. It is based upon 21 in-depth qualitative interviews with convicted drink drivers. All interviewees were contacted while attending mandatory courses in “Alcohol and Traffic safety...... on the interviewee’s risk behaviour, especially in relation to driving. The interviewees are first divided into 1) a group of young “edgeworkers” with pronounced general risk behaviour, 2) a group of middle-aged “post-edgeworkers”, most with criminal records, and 3) a group of middle-aged and older heavy consumers...

  20. Heavy flavor production in QCD

    International Nuclear Information System (INIS)

    Hoyer, P.

    1989-01-01

    In this paper a brief survey is given of the status of heavy quark hadroproduction in QCD. The next-to-leading order calculation allows an estimate of the theoretical uncertainties to be made. They are manageable for top, but considerable for charm. The data on charm continues to show an excess of events at large x F , compared to QCD expectations. This may be linked to the measured anomalous A-dependence of the cross section on nuclear targets, also present at large x F . QCD models for the diffractive production of heavy quarks remain to be tested experimentally

  1. Central collisions of heavy ions

    International Nuclear Information System (INIS)

    Fung, Sun-yiu.

    1991-10-01

    This report describes the activities of the Heavy Ion Physics Group at the University of California, Riverside from October 1, 1990 to September 30, 1991. During this period, our program focuses on particle production at AGS energies, and correlation studies at the Bevalac in nucleus central collisions. We participated in the preparation of letters of intent for two RHIC experiments -- the OASIS proposal and the Di-Muon proposal -- and worked on two RHIC R ampersand D efforts -- a silicon strip detector project and a muon-identifier project. A small fraction of time was also devoted to physics programs outside the realm of heavy ion reactions by several individuals

  2. Distinct structural features of TFAM drive mitochondrial DNA packaging versus transcriptional activation.

    Science.gov (United States)

    Ngo, Huu B; Lovely, Geoffrey A; Phillips, Rob; Chan, David C

    2014-01-01

    TFAM (transcription factor A, mitochondrial) is a DNA-binding protein that activates transcription at the two major promoters of mitochondrial DNA (mtDNA)--the light strand promoter (LSP) and the heavy strand promoter 1 (HSP1). Equally important, it coats and packages the mitochondrial genome. TFAM has been shown to impose a U-turn on LSP DNA; however, whether this distortion is relevant at other sites is unknown. Here we present crystal structures of TFAM bound to HSP1 and to nonspecific DNA. In both, TFAM similarly distorts the DNA into a U-turn. Yet, TFAM binds to HSP1 in the opposite orientation from LSP explaining why transcription from LSP requires DNA bending, whereas transcription at HSP1 does not. Moreover, the crystal structures reveal dimerization of DNA-bound TFAM. This dimerization is dispensable for DNA bending and transcriptional activation but is important in DNA compaction. We propose that TFAM dimerization enhances mitochondrial DNA compaction by promoting looping of the DNA.

  3. Heavy flavour production at RHIC and LHC

    Directory of Open Access Journals (Sweden)

    Innocenti Gian Michele

    2018-01-01

    Full Text Available In this proceedings, I present selected experimental results on heavy-flavour production at RHIC and at the LHC, which were presented at the Strangeness in Quark Matter 2017 conference. I will present a brief introduction to the heavy-flavour physics in heavy ion collisions and I will focus on recents measurements of in-medium energy loss and and collective properties of heavy-flavour particles, which provided important information on the mechanisms of heavy flavour interaction with the hot and dense medium created in ultra-relativistic heavy-ion collisions.

  4. Transcriptional repression of BODENLOS by HD-ZIP transcription factor HB5 in Arabidopsis thaliana.

    NARCIS (Netherlands)

    Smet, De I.; Lau, S.; Ehrismann, J.S.; Axiotis, I.; Kolb, M.; Kientz, M.; Weijers, D.; Jürgens, G.

    2013-01-01

    In Arabidopsis thaliana, the phytohormone auxin is an important patterning agent during embryogenesis and post-embryonic development, exerting effects through transcriptional regulation. The main determinants of the transcriptional auxin response machinery are AUXIN RESPONSE FACTOR (ARF)

  5. General analysis of weak decay form factors in heavy to heavy and heavy to light baryon transitions

    International Nuclear Information System (INIS)

    Hussain, F.; Liu Dongsheng; Kraemer, M.; Koerner, J.G.; Tawfiq, S.

    1992-01-01

    We present a complete analysis of the heavy to heavy and heavy to light baryon semi-leptonic decays in the heavy quark effective theory within the framework of a Bethe-Salpeter (BS) approach and demonstrate the equivalence of this approach to other work in the field. We present in a compact form the baryon BS amplitudes which incorporate the symmetries manifest in the heavy quark limit and which also show clearly the light quark dynamics. A similar form of the BS amplitude is presented for light baryons. Using the BS amplitudes, the heavy to heavy and heavy to light semi-leptonic baryon decays are considered. As expected there is a dramatic reduction in the number of form factors. An advantage of our BS approach is demonstrated where the form factors are written as loop integrals which in principle can be calculated. (orig.)

  6. Risk and toxicity assessments of heavy metals in sediments and fishes from the Yangtze River and Taihu Lake, China.

    Science.gov (United States)

    Fu, Jie; Hu, Xin; Tao, Xiancong; Yu, Hongxia; Zhang, Xiaowei

    2013-11-01

    Heavy metal pollution is one of the most serous environmental issues globally. To evaluate the metal pollution in Jiangsu Province of China, the total concentrations of heavy metals in sediments and fishes from the Yangtze River and Taihu Lake were analyzed. Ecological risk of sediments and human health risk of fish consumption were assessed respectively. Furthermore, toxicity of samples on expression of the stress responsive genes was evaluated using microbial live cell-array method. The results showed that the heavy metals concentrations in sediments from the Yangtze River were much higher than those in sediments from the Taihu Lake. However, the fishes from the Taihu Lake had higher concentrations of heavy metals than fishes from the Yangtze River. Ecological risk evaluation showed that the heavy metal contaminants in sediments from the Yangtze River posed higher risk of adverse ecological effects, while sediments from the study areas of Taihu Lake were relatively safe. Health risk assessment suggested that the heavy metals in fishes of both Yangtze River and Taihu Lake might have risk of adverse health effects to human. The toxicity assessment indicated that the heavy metals in these sediments and fishes showed transcriptional effects on the selected 21 stress responsive genes, which were involved in the pathways of DNA damage response, chemical stress, and perturbations of electron transport. Together, this field investigation combined with chemical analysis, risk assessment and toxicity bioassay would provide useful information on the heavy metal pollution in Jiangsu Province. Copyright © 2013 Elsevier Ltd. All rights reserved.

  7. The influence of religious affiliation on heavy drinking, heavy smoking and heavy betel nut chewing.

    Science.gov (United States)

    Chen, Chiang-Ming

    2014-01-01

    The results of a national survey of determinants of drinking, smoking and betel-nut chewing behaviors are analyzed. The purpose of this paper is to empirically investigate whether drinking, smoking and betel-nut chewing are influenced by a variety of religions based on Taiwan data. Our results suggest that Buddhism, Taoism and practitioners of Chinese folk region are positively associated with heavy betel nut chewing while the religion effects on heavy smoking and drinking are statistically insignificant. Our findings on religion effects in Taiwan can be a valuable reference for comparison in Christian and western countries. © 2013 Elsevier Ltd. All rights reserved.

  8. Shock Mounting for Heavy Machines

    Science.gov (United States)

    Thompson, A. R.

    1984-01-01

    Elastomeric bearings eliminate extraneous forces. Rocket thrust transmitted from motor to load cells via support that absorbs extraneous forces so they do not affect accuracy of thrust measurements. Adapter spoked cone fits over forward end of rocket motor. Shock mounting developed for rocket engines under test used as support for heavy machines, bridges, or towers.

  9. Heavy quark physics from LEP

    International Nuclear Information System (INIS)

    Dornan, P.J.

    1997-01-01

    A review of some of the latest results on heavy flavor physics from the LEP Collaborations is presented. The emphasis is on B physics, particularly new results and those where discrepancies is given of the many techniques which have been developed to permit these analyses

  10. Heavy quark physics from LEP

    Energy Technology Data Exchange (ETDEWEB)

    Dornan, P.J. [Imperial College of Science Technology and Medicine, London (United Kingdom)

    1997-01-01

    A review of some of the latest results on heavy flavor physics from the LEP Collaborations is presented. The emphasis is on B physics, particularly new results and those where discrepancies is given of the many techniques which have been developed to permit these analyses.

  11. Future relativistic heavy ion experiments

    International Nuclear Information System (INIS)

    Pugh, H.G.

    1980-12-01

    Equations of state for nuclear matter and ongoing experimental studies are discussed. Relativistic heavy ion physics is the only opportunity to study in the laboratory the properties of extended multiquark systems under conditions such that quarks might run together into new arrangements previously unobserved. Several lines of further study are mentioned

  12. Summary of heavy ion theory

    International Nuclear Information System (INIS)

    Gavin, S.

    1994-09-01

    Can we study hot QCD using nuclear collisions? Can we learn about metallic hydrogen from the impact of comet Shoemaker-Levy 9 on Jupiter? The answer to both questions may surprise you exclamation point I summarize progress in relativistic heavy ion theory reported at DPF '94 in the parallel sessions

  13. Heavy neutral leptons at FASER

    Science.gov (United States)

    Kling, Felix; Trojanowski, Sebastian

    2018-05-01

    We study the prospects for discovering heavy neutral leptons at Forward Search Experiment (FASER), the newly proposed detector at the LHC. Previous studies showed that a relatively small detector with ˜10 m length and ≲1 m2 cross sectional area can probe large unconstrained parts of parameter space for dark photons and dark Higgs bosons. In this work, we show that FASER will also be sensitive to heavy neutral leptons that have mixing angles with the active neutrinos that are up to an order of magnitude lower than current bounds. In particular, this is true for heavy neutral leptons produced dominantly in B -meson decays, in which case FASER's discovery potential is comparable to the proposed SHiP detector. We also illustrate how the search for heavy neutral leptons at FASER will be complementary to ongoing searches in high-pT experiments at the LHC and can shed light on the nature of dark matter and the process of baryogenesis in the early Universe.

  14. Improvement of Lead Tolerance of Saccharomyces cerevisiae by Random Mutagenesis of Transcription Regulator SPT3.

    Science.gov (United States)

    Zhu, Liying; Gao, Shan; Zhang, Hongman; Huang, He; Jiang, Ling

    2018-01-01

    Bioremediation of heavy metal pollution with biomaterials such as bacteria and fungi usually suffer from limitations because of microbial sensitivity to high concentration of heavy metals. Herein, we adopted a novel random mutagenesis technique called RAISE to manipulate the transcription regulator SPT3 of Saccharomyces cerevisiae to improve cell lead tolerance. The best strain Mutant VI was selected from the random mutagenesis libraries on account of the growth performance, with higher specific growth rate than the control strain (0.068 vs. 0.040 h -1 ) at lead concentration as high as 1.8 g/L. Combined with the transcriptome analysis of S. cerevisiae, expressing the SPT3 protein was performed to make better sense of the global regulatory effects of SPT3. The data analysis revealed that 57 of S. cerevisiae genes were induced and 113 genes were suppressed, ranging from those for trehalose synthesis, carbon metabolism, and nucleotide synthesis to lead resistance. Especially, the accumulation of intracellular trehalose in S. cerevisiae under certain conditions of stress is considered important to lead resistance. The above results represented that SPT3 was acted as global transcription regulator in the exponential phase of strain and accordingly improved heavy metal tolerance in the heterologous host S. cerevisiae. The present study provides a route to complex phenotypes that are not readily accessible by traditional methods.

  15. Overlapping transcription structure of human cytomegalovirus

    Indian Academy of Sciences (India)

    Transcription of human cytomegalovirus UL/b′ region has been studied extensively for some genes. In this study, transcripts of the UL140 and UL141, two of the UL/b′ genes, were identified in late RNAs of three HCMV isolates using Northern blot hybridization, cDNA library screening and RACE-PCR. At least three ...

  16. Overlapping transcription structure of human cytomegalovirus ...

    Indian Academy of Sciences (India)

    2013-01-21

    Jan 21, 2013 ... Transcription of human cytomegalovirus UL/b′ region has been studied extensively for some genes. In this study, transcripts of the UL140 and UL141, two of the UL/b′ genes, were identified in late RNAs of three HCMV isolates using Northern blot hybridization, cDNA library screening and RACE-PCR.

  17. Transcription of Byzantine Chant - Problems, Possibilities, Formats

    DEFF Research Database (Denmark)

    Troelsgård, Christian

    2007-01-01

    Discusses the problems and possibilities for transsription of Byzantine chant on the basis of medieval musical manuscripts. A relatively 'neutral' style of transcription is suggested for musicological purposes.......Discusses the problems and possibilities for transsription of Byzantine chant on the basis of medieval musical manuscripts. A relatively 'neutral' style of transcription is suggested for musicological purposes....

  18. Regulation of transcription in hyperthermophilic archaea

    NARCIS (Netherlands)

    Brinkman, A.B.

    2002-01-01

    The aim of the research presented here was to insight in the mechanisms by which transcription in hyperthermophilic archaea is regulated. To accomplish this, we have aimed (I) to identify transcriptional regulatory proteins from hyperthermophilic archaea, (II) to characterize these

  19. 45 CFR 99.27 - Official transcript.

    Science.gov (United States)

    2010-10-01

    ... 45 Public Welfare 1 2010-10-01 2010-10-01 false Official transcript. 99.27 Section 99.27 Public Welfare DEPARTMENT OF HEALTH AND HUMAN SERVICES GENERAL ADMINISTRATION PROCEDURE FOR HEARINGS FOR THE CHILD CARE AND DEVELOPMENT FUND Hearing Procedures § 99.27 Official transcript. The Department will...

  20. RNA polymerase II collision interrupts convergent transcription

    DEFF Research Database (Denmark)

    Hobson, David J; Wei, Wu; Steinmetz, Lars M

    2012-01-01

    Antisense noncoding transcripts, genes-within-genes, and convergent gene pairs are prevalent among eukaryotes. The existence of such transcription units raises the question of what happens when RNA polymerase II (RNAPII) molecules collide head-to-head. Here we use a combination of biochemical...

  1. Transcription regulation by the Mediator complex.

    Science.gov (United States)

    Soutourina, Julie

    2018-04-01

    Alterations in the regulation of gene expression are frequently associated with developmental diseases or cancer. Transcription activation is a key phenomenon in the regulation of gene expression. In all eukaryotes, mediator of RNA polymerase II transcription (Mediator), a large complex with modular organization, is generally required for transcription by RNA polymerase II, and it regulates various steps of this process. The main function of Mediator is to transduce signals from the transcription activators bound to enhancer regions to the transcription machinery, which is assembled at promoters as the preinitiation complex (PIC) to control transcription initiation. Recent functional studies of Mediator with the use of structural biology approaches and functional genomics have revealed new insights into Mediator activity and its regulation during transcription initiation, including how Mediator is recruited to transcription regulatory regions and how it interacts and cooperates with PIC components to assist in PIC assembly. Novel roles of Mediator in the control of gene expression have also been revealed by showing its connection to the nuclear pore and linking Mediator to the regulation of gene positioning in the nuclear space. Clear links between Mediator subunits and disease have also encouraged studies to explore targeting of this complex as a potential therapeutic approach in cancer and fungal infections.

  2. Heavy metals in Mindhola river estuary, India

    Digital Repository Service at National Institute of Oceanography (India)

    Zingde, M.D.; Rokade, M.A; Mandalia, A

    The heavy metal concentrations are studied along the Mindhola river estuary. Surface and bottom water samples were collected using Niskin Sampler. The sediment samples were collected using a Van Veen grab. The heavy metal concentration is estimated...

  3. Heavy particle radiotherapy: prospects and pitfalls

    International Nuclear Information System (INIS)

    Faju, M.R.

    1980-01-01

    The use of heavy particles in radiotherapy of tumor volumes is examined. Particles considered are protons, helium ions, heavy ions, negative pions, and fast neutrons. Advantages and disadvantages are discussed

  4. Heavy water. A production alternative for Venezuela

    International Nuclear Information System (INIS)

    A survey of heavy water production methods is made. Main facts about isotopic and distillation methods, reforming and coupling to a Hydrogen distillation plant are presented. A feasibility study on heavy water production in Venezuela is suggested

  5. A PTIP-PA1 subcomplex promotes transcription for IgH class switching independently from the associated MLL3/MLL4 methyltransferase complex

    DEFF Research Database (Denmark)

    Starnes, Linda M; Su, Dan; Pikkupeura, Laura M

    2016-01-01

    Class switch recombination (CSR) diversifies antibodies for productive immune responses while maintaining stability of the B-cell genome. Transcription at the immunoglobulin heavy chain (Igh) locus targets CSR-associated DNA damage and is promoted by the BRCT domain-containing PTIP (Pax transacti...

  6. Study of the heavy water regeneration processes

    International Nuclear Information System (INIS)

    Cavcic, E.

    1965-11-01

    Experience derived from heavy water reactor operation showed degradation and dilution of heavy water to be inevitable and depends on the type of reactor. Dilution of heavy water during operation of the RA and the RB reactors is shown in this report. Principles and procedures of heavy water regeneration by electrolysis, fractional distillation, cleaning, prevention of tritium contamination are described as well as separation columns

  7. Nuclear physics with heavy ions. 1

    International Nuclear Information System (INIS)

    Reif, R.; Schmidt, R.

    1981-01-01

    Some results obtained in nuclear physics with heavy ions in the energy range up to 10 MeV/nucleon are summarized. A short review of the tendencies in the development of heavy ion accelerators is followed by a classification of the mechanisms observed in heavy ion interactions. The characteristics of the various types of reactions are presented. Applications of heavy ion beams in other branches of sciences are discussed. (author)

  8. New theoretical results in heavy quark hadroproduction

    International Nuclear Information System (INIS)

    Nason, P.

    1992-01-01

    We describe the status of the heavy quark hadroproduction theory. In particular, we discuss recent developments on production of heavy quarks in the high energy limit, and the results of a new calculation to next-to-leading accuracy of the fully exclusive parton cross section for heavy quark production. (orig.)

  9. BROOKHAVEN: Looking towards heavy ion physics

    International Nuclear Information System (INIS)

    Anon.

    1988-01-01

    July 11-22 were busy days at Brookhaven with a two-week Summer Institute on Relativistic Heavy Ion Physics. After an intensive first week designed to introduce young physicists to high energy heavy ion research, the second week was a workshop on detector technology for Brookhaven's proposed Relativistic Heavy Ion Collider (RHIC), attended by some 150 physicists

  10. Therapy tumor with the heavy ions beam

    International Nuclear Information System (INIS)

    Dang Bingrong; Wei Zengquan; Li Wenjian

    2002-01-01

    As physical characteristic of heavy ions Bragg peak, therapy tumor with heavy ions is becoming advanced technology. So, many countries have developed the technology and used to treat tumor, the societal and economic effects are beneficial to people. The authors show the development, present situation and information of research in world of advanced radiotherapy with heavy ions

  11. Spectroscopy of heavy few-electron ions

    International Nuclear Information System (INIS)

    Mokler, P.H.

    1986-07-01

    In this paper we ask first, why is it interesting to investigate heavy-few electron ions. Then the various accelerator-based methods to produce heavy few-electron ions are discussed. In the main part an overview on available heavy few-electron ion data and current experiments is given. The summary will end up with future aspects in this field. (orig.)

  12. Polarization phenomena in heavy-ion reactions

    International Nuclear Information System (INIS)

    Sugimoto, K.; Ishihara, M.; Takahashi, N.

    1984-01-01

    This chapter presents a few key experiments which provide direct evidence of the polarization phenomena in heavy-ion reactions. The theory of polarization observables and measurements is given with the necessary formulae. The polarization phenomena is described and studies of product nuclear polarization in heavy-ion reactions are discussed. Studies of heavy-ion reactions induced by polarized beams are examined

  13. Formation of heavy quarks in ultrarelativistic heavy-ion collisions

    International Nuclear Information System (INIS)

    Schneider, S.M.; Greiner, W.; Soff, G.

    1992-02-01

    We investigate the production of heavy quarks in continuum and bound states in nuclear collisions. Creation for free banti b and tanti t quark pairs and for bottomonium and toponium in the ground state are computed at RHIC, LHC and SSC energies. Central and peripheral heavy-ion collisions are discussed. For top quark creation we assumed a mass range of 90 GeV ≤ m t ≤ 250 GeV. The creation rate for top quarks on peripheral collisions is estimated to be by a factor 40 to 130 smaller compared with corresponding central collisions. For m t = 130 GeV we calculated a creation rate of about 4760 top quark pairs per day at the LHC (3.5 TeV/u) for Pb-Pb collisions. (orig.)

  14. 77 FR 4678 - Nonconformance Penalties for On-Highway Heavy Heavy-Duty Diesel Engines

    Science.gov (United States)

    2012-01-31

    ...), optimized turbo-charging, optimized fuel injection, diesel particulate filters), plus liquid urea based...-Highway Heavy Heavy-Duty Diesel Engines AGENCY: Environmental Protection Agency (EPA). ACTION: Interim... manufacturers of heavy heavy-duty diesel engines in model years 2012 and 2013 for emissions of oxides of...

  15. Heavy ions: Report from Relativistic Heavy Ion Collider

    Indian Academy of Sciences (India)

    2012-10-12

    Oct 12, 2012 ... Experiments using ultrarelativistic heavy-ion collisions study nuclear matter under ... sN N = 10 GeV for Pb+Pb collisions, corresponding to an initial .... quenching through systematic comparisons of data to models, and .... the RdAu and RCP = (0−20%)/(60−80%) factors for the J/ψ production in d+Au col-.

  16. Heavy flavour production at CMS in heavy ion collisions

    CERN Document Server

    Nguyen, Matthew

    2015-01-01

    We review recent results relating to beauty production in heavy-ion collisions, in both the closed and open heavy flavor sectors, from the CMS experiment at the LHC. The sequential suppression of the ° states in PbPb collisions is thought to be evidence of the dissociation of quarkonia bound states in deconfined matter. Data from pPb collisions demonstrate that while cold nuclear effects appear to be subdominant in minimum bias collisions, there exists a non-trivial dependence on collision multiplicity that remains to be understood. The suppression of high p T particles in heavy-ion collisions, relative to the expectation from pp collisions, is typically interpreted in terms of energy loss of hard scattered parton in the dense nuclear medium. The flavor dependence of the energy loss may be accessed via measurements of b hadrons and b-tagged jets. Measurement of B mesons, via non-prompt J = y , at relatively low p T indicate a smaller suppression factor than D meson or inclusive charged hadrons. Data on b jet...

  17. Colon cancer associated transcripts in human cancers.

    Science.gov (United States)

    Chen, Yincong; Xie, Haibiao; Gao, Qunjun; Zhan, Hengji; Xiao, Huizhong; Zou, Yifan; Zhang, Fuyou; Liu, Yuchen; Li, Jianfa

    2017-10-01

    Long non-coding RNAs serve as important regulators in complicated cellular activities, including cell differentiation, proliferation and death. Dysregulation of long non-coding RNAs occurs in the formation and progression of cancers. The family of colon cancer associated transcripts, long non-coding RNAs colon cancer associated transcript-1 and colon cancer associated transcript-2 are known as oncogenes involved in various cancers. Colon cancer associated transcript-1 is a novel lncRNA located in 8q24.2, and colon cancer associated transcript-2 maps to the 8q24.21 region encompassing rs6983267. Colon cancer associated transcripts have close associations with clinical characteristics, such as lymph node metastasis, high TNM stage and short overall survival. Knockdown of them can reverse the malignant phenotypes of cancer cells, including proliferation, migration, invasion and apoptosis. Moreover, they can increase the expression level of c-MYC and oncogenic microRNAs via activating a series of complex mechanisms. In brief, the family of colon cancer associated transcripts may serve as potential biomarkers or therapeutic targets for human cancers. Copyright © 2017 Elsevier Masson SAS. All rights reserved.

  18. Scaling behaviour of leptonic decay constants for heavy quarkonia and heavy mesons

    International Nuclear Information System (INIS)

    Kiselev, V.V.

    1994-01-01

    In the framework of QCD sum rules one uses a scheme, allowing one to apply the conditions of both nonrelativistic heavy quark motion inside mesons and the heavy quark flavour independence of nonsplitting nS-state density. In the leading order an analitic expression is derived for leptonic constants of both heavy quarkonia and heavy mesons with a single heavy quark. The expression allows one explicitly to determine scaling properties of the constants. 24 refs., 2 tabs

  19. Heavy flavor production from photons and hadrons

    International Nuclear Information System (INIS)

    Heusch, C.A.

    1982-01-01

    The present state of the production and observation of hadrons containing heavy quarks or antiquarks as valence constituents, in reactions initiated by real and (space-like) virtual photon or by hadron beams is discussed. Heavy flavor production in e + e - annihilation, which is well covered in a number of recent review papers is not discussed, and similarly, neutrino production is omitted due to the different (flavor-changing) mechanisms that are involved in those reactions. Heavy flavors from spacelike photons, heavy flavors from real photons, and heavy flavors from hadron-hadron collisions are discussed

  20. Calorimetric cryodetectors for heavy ions

    Energy Technology Data Exchange (ETDEWEB)

    Egelhof, P; Henning, W; Kienlin, A v; Meier, J; Truebenbacher, V [Gesellschaft fuer Schwerionenforschung mbH, Darmstadt (Germany, F.R.) Mainz Univ. (Germany, F.R.). Inst. fuer Physik; Azgui, F [CDTN, Algiers (Algeria); Shepard, K [Argonne National Lab., IL (USA)

    1990-01-01

    Status and first test results are reported for a project to develop calorimetric cryodetectors for heavy ions. The special conditions for the detection of energetic heavy ions are discussed. Presently the investigations are focussed on semiconductor bolometers and aluminium-strip superconducting phase-transition thermometers that are cooled with liquid {sup 4}He and operate in the temperature range 1.3-4.2 K. For a germanium bolometer the temperature dependence of the resistance, voltage-current curves, the time response to heating by voltage pulses and the response to ionizing {alpha}-radiation are reported. First tests on phase transition thermometers using thin aluminum strips yield a transition width of {Delta}T=8.6 mK at T{sub c}=1.467 K. (orig.).

  1. Physics of Ultrarelativistic Heavy Ions

    International Nuclear Information System (INIS)

    Giubellino, P.

    1996-01-01

    This paper is devoted to a general presentation of the physics of Ultrarelativistic Heavy Ions, as seen from the experimentalist close-quote s point of view. The aim of this research is the study of nuclear matter under extreme conditions of temperature and pressure, extending in this way our understanding of the strong interactions in general, and of colour confinement in particular. This young field of Physics has been growing rapidly in the past years, and any attempt to cover it in few pages will be rather sketchy and many important aspects will have to be left out. I will mainly try to cover the general motivations to undertake this study, and just mention the experimental challenges to be faced, the results from the experiments at CERN and BNL, and finally the fascinating program ahead of us, with a glimpse at the CERN LHC used as a heavy-ion collider. copyright 1996 American Institute of Physics

  2. RHIC heavy ion operations performance

    CERN Document Server

    Satogata, T; Ferrone, R; Pilat, F

    2006-01-01

    The Relativistic Heavy Ion Collider (RHIC) completed its fifth year of operation in 2005, colliding copper ion beams with ps=200 GeV/u and 62.4 GeV/u[1]. Previous heavy ion runs have collided gold ions at ps=130 GeV/u, 200 GeV/u, and 62.4 GeV/u[2], and deuterons and gold ions at ps=200 GeV/u[3]. This paper discusses operational performance statistics of this facility, including Cu- Cu delivered luminosity, availability, calendar time spent in physics stores, and time between physics stores. We summarize the major factors affecting operations efficiency, and characterize machine activities between physics stores.

  3. Process of distilling heavy hydrocarbons

    Energy Technology Data Exchange (ETDEWEB)

    1929-12-03

    This invention has for its object the distillation of heavy liquid hydrocarbons for the purpose of obtaining lighter hydrocarbons stable and immediately salable for fuels in combustion motors. The process is distinguished by the fact that the heavy hydrocarbon is distilled by means of heating to a temperature in keeping with the nature of the material to be treated up to 350/sup 0/C under pressure or without pressure the distillation being carried out on catalysts containing successively nickel, copper, and iron (3 parts of nickel, 1 part of copper, and 1 part of iron), the vapors produced by this distillation being exposed in turn to the action of catalysts of the same nature and in the same proportion.

  4. Heavy flavor measurements at LHC

    CERN Document Server

    Spagnolo, S; The ATLAS collaboration

    2013-01-01

    ATLAS and CMS measurements in the area of heavy flavor physics are reviewed with focus on the most recent results. The topics discussed include heavy flavor production rates and properties, exclusive b-hadron production, with attention to the recent observations of rare b-hadrons and to the measurements of Lambda_b production cross section, lifetime and mass. Differential production cross sections and polarization measurements of Upsilon states are presented, along with production ratios of chi_c states in the charmonium system. Evidence for a new Xsi_b state and observations of structures in the J/Psi phi spectrum from B+- decays to J/Psi phi K+- in the CMS data are also reported. Precision studies of the Bs system and determination of CP-violation sensitive parameters are discussed. Finally the status of the searches for rare decays is presented.

  5. Heavy flavor measurements at LHC

    CERN Document Server

    Spagnolo, S; The ATLAS collaboration

    2013-01-01

    ATLAS and CMS measurements in the area of heavy flavor physics are reviewed with focus on the most recent results. The topics discussed include heavy flavor production rates and properties, exclusive b-hadron production, with attention to the recent observations of rare b-hadrons and to the precise measurements of Lambda_b production cross section, lifetime and mass. Differential production cross sections and polarization measurements of Upsilon states are presented, along with production ratios of chi_c states in the charmonium system. Evidence for a new Xsi_b state and observations of structures in the J/Psi phi spectrum from B+- decays to J/Psi phi K+- in the CMS data are also reported. Precision studies of the Bs system and determination of CP-violation sensitive parameters are discussed. Finally the status of the searches for rare FCNC decays is presented.

  6. Micromycetes sensitiveness to heavy metals

    Directory of Open Access Journals (Sweden)

    O. N. Korinovskaya

    2011-07-01

    Full Text Available The sensitivity of 33 micromycete species to nitric compounds of copper, lead, zinc, nickel and cadmium has been determined. Absidia butleri Lendn, Mortierella vanesae Dixon-Stewart, Cunninghamella echinulata Thaxte, Curvularia tuberculata Jain, Cladosporium cladosporiodes (Fresen G. A. de Vries and Fusarium solani (C. Mart. Appel et Wollenw are sensitive to minimal content of the heavy metals (0.75 of maximum permissible concentration (MPC in the growth medium. At the same time Trixoderma longibrachiatiim Rifai, Alternaria alternatа (Fr. Keissl and Penicillium sp. 4 demonstrated moderate growth under maximal concentration (50 MPC. It is determined that minimal content of the heavy metals in the initial stage of influence (up to 48 h promotes growth of only Fusarium oxysporum E. F. Sm. et Swingle, while retards growth of the other species.

  7. Heavy ion accelerators at GSI

    International Nuclear Information System (INIS)

    Angert, N.

    1984-01-01

    The status of the Unilac heavy ion linear accelerator at GSI, Darmstadt is given. A schematic overall plan view of the Unilac is shown and its systems are described. List of isotopes and intensities accelerated at the Unilac is presented. The experimental possibilities at GSI should be considerably extended by a heavy ion synchrotron (SIS 18) in combination with an experimental storage ring (ESR). A prototype of the rf-accelerating system of the synchrotron has been built and tested. Prototypes for the quadrupole and dipole magnets for the ring are being constructed. The SIS 18 is desigmed for a maximum magnetic rigidity of 18Tm so that neon can be accelerated to 2 GeV/W and uranium to 1 GeV/u. The design allows also the acceleration of protons up to 4.5 GeV. The ESR permits to storage fully stripped uranium ions up to an energy of approximately R50 MeV/u

  8. Mutation induction by heavy ions

    Science.gov (United States)

    Kiefer, J.; Stoll, U.; Schneider, E.

    1994-10-01

    Mutation induction by heavy ions is compared in yeast and mammalian cells. Since mutants can only be recovered in survivors the influence of inactivation cross sections has to be taken into account. It is shown that both the size of the sensitive cellular site as well as track structure play an important role. Another parameter which influences the probability of mutation induction is repair: Contrary to naive assumptions primary radiation damage does not directly lead to mutations but requires modification to reconstitute the genetic machinery so that mutants can survive. The molecular structure of mutations was analyzed after exposure to deuterons by amplification with the aid of polymerase chain reaction. The results-although preliminary-demonstrate that even with densely ionizing particles a large fraction does not carry big deletions which suggests that point mutations may also be induced by heavy ions.

  9. Semiholography for heavy ion collisions

    CERN Document Server

    Mukhopadhyay, Ayan

    2017-01-01

    The formation of QGP in heavy ion collisions gives us a great opportunity for learning about nonperturbative dynamics of QCD. Semiholography provides a new consistent framework to combine perturbative and non-perturbative effects in a coherent way and can be applied to obtain an effective description for heavy ion collisions. In particular, it allows us to include nonperturbative effects in existing glasma effective theory and QCD kinetic theory for the weakly coupled saturated degrees of freedom liberated by the collisions in the initial stages in a consistent manner. We argue why the full framework should be able to confront experiments with only a few phenomenological parameters and present feasibility tests for the necessary numerical computations. Furthermore, we discuss that semiholography leads to a new description of collective flow in the form of a generalised non-Newtonian fluid. We discuss some open questions which we hope to answer in the near future.

  10. Transcriptional mapping of rabies virus in vivo

    International Nuclear Information System (INIS)

    Flamand, A.; Delagneau, J.F.

    1978-01-01

    Synthesis of the proteins of rabies virus was studied in hamster cell infected with uv-irradiated virus. The uv target size of genes L, N, M 1 , and M 2 was measured during primary transcription. Except for N, the target size of the remaining genes was considerably larger than that of their physical sizes. The data fit the hypothesis that four genes occupy a single transcriptional unit and that transcription of rabies virus proceeds in the order N, M 1 , M 2 , and L

  11. CHD chromatin remodelers and the transcription cycle

    Science.gov (United States)

    Murawska, Magdalena

    2011-01-01

    It is well established that ATP-dependent chromatin remodelers modulate DNA access of transcription factors and RNA polymerases by “opening” or “closing” chromatin structure. However, this view is far too simplistic. Recent findings have demonstrated that these enzymes not only set the stage for the transcription machinery to act but also are actively involved at every step of the transcription process. As a consequence, they affect initiation, elongation, termination and RNA processing. In this review we will use the CHD family as a paradigm to illustrate the progress that has been made in revealing these new concepts. PMID:22223048

  12. NAC transcription factors: structurally distinct, functionally diverse

    DEFF Research Database (Denmark)

    Olsen, Addie Nina; Ernst, Heidi A; Leggio, Leila Lo

    2005-01-01

    level and localization, and to the first indications of NAC participation in transcription factor networks. The recent determination of the DNA and protein binding NAC domain structure offers insight into the molecular functions of the protein family. Research into NAC transcription factors has......NAC proteins constitute one of the largest families of plant-specific transcription factors, and the family is present in a wide range of land plants. Here, we summarize the biological and molecular functions of the NAC family, paying particular attention to the intricate regulation of NAC protein...

  13. Heavy-ion-spectrometer system

    International Nuclear Information System (INIS)

    1982-05-01

    LBL safety policy (Pub 300 Appendix E) states that every research operation with a Class A risk potential (DOE 5484.1) should identify potentially hazardous procedures associated with the operation and develop methods for accomplishing the operation safely without personnel injury or property damage. The rules and practices that management deems to be minimally necessary for the safe operations of the Heavy Ion Spectrometer System (HISS) in the Bevatron Experimental Hall (51B) are set forth in this Operation Safety Procedures

  14. Experiments with stored heavy ions

    International Nuclear Information System (INIS)

    Fick, D.; Habs, D.; Jaeschke, E.

    1985-02-01

    The success of newly-developed methods of phase space cooling in proton and antiproton storage rings was sufficient for an examination of whether these methods could also be applied in storage rings for heavy ions. An expansion of these methods to heavy ion beams seems attractive for all sorts of reasons. Recently, this area was extensively discussed in a series of working meetings with the result that heavy ion storage rings are to be built for use in atomic and nuclear physics, with integrated radiation cooling and stochastic cooling, but primarily electron cooling. The current state of research and planning for the storage experiment is described. It is not intended to be a structural specification worked out in detail. The general design of the ring, however, has been established, and experimental details have deliberately been kept flexible, to thereby allow very different sorts of experiments to be conducted. The ring described with a maximum magnetic rigidity of Bp = 1.5 Tm, is designed in quadripartite symmetry. The total circumference is approximately 35 m, and there are four straight sections each 3.5 m long for the electron cooling sections, the experimental equipment, as well as HF system and injection. One of the most desirable properties of the reservoir is the multi-charge mode, which will significantly improve the operation which heavy ion beams, which reverse charge in electron cooling sections, target and residual vacuum. Initial considerations are presented with regard to stochastic and electron cooling. A review of possible classes of experiments is given and the schedule and financing of the project is outlined. 46 refs

  15. Computing for Heavy Ion Physics

    International Nuclear Information System (INIS)

    Martinez, G.; Schiff, D.; Hristov, P.; Menaud, J.M.; Hrivnacova, I.; Poizat, P.; Chabratova, G.; Albin-Amiot, H.; Carminati, F.; Peters, A.; Schutz, Y.; Safarik, K.; Ollitrault, J.Y.; Hrivnacova, I.; Morsch, A.; Gheata, A.; Morsch, A.; Vande Vyvre, P.; Lauret, J.; Nief, J.Y.; Pereira, H.; Kaczmarek, O.; Conesa Del Valle, Z.; Guernane, R.; Stocco, D.; Gruwe, M.; Betev, L.; Baldisseri, A.; Vilakazi, Z.; Rapp, B.; Masoni, A.; Stoicea, G.; Brun, R.

    2005-01-01

    This workshop was devoted to the computational technologies needed for the heavy quarkonia and open flavor production study at LHC (large hadron collider) experiments. These requirements are huge: peta-bytes of data will be generated each year. Analysing this will require the equivalent of a few thousands of today's fastest PC processors. The new developments in terms of dedicated software has been addressed. This document gathers the transparencies that were presented at the workshop

  16. Heavy metals in sea turtles

    Energy Technology Data Exchange (ETDEWEB)

    Witkowski, S.A. (Millersville State College, PA); Frazier, J.G.

    1982-07-01

    Bone and barnacle samples from sea turtles (Hepidochelys olivacea) in Ecuador were analyzed for manganese, iron, copper, zinc and lead. Analysis was performed by flame atomic absorption spectroscopy. Results show that zinc and iron levels in bone and barnacles were greater than copper, manganese and lead levels. The significance of the findings is difficult to interpret because so little is known about baseline levels and physiological effects of heavy metals in the animals. (JMT)

  17. Computing for Heavy Ion Physics

    Energy Technology Data Exchange (ETDEWEB)

    Martinez, G.; Schiff, D.; Hristov, P.; Menaud, J.M.; Hrivnacova, I.; Poizat, P.; Chabratova, G.; Albin-Amiot, H.; Carminati, F.; Peters, A.; Schutz, Y.; Safarik, K.; Ollitrault, J.Y.; Hrivnacova, I.; Morsch, A.; Gheata, A.; Morsch, A.; Vande Vyvre, P.; Lauret, J.; Nief, J.Y.; Pereira, H.; Kaczmarek, O.; Conesa Del Valle, Z.; Guernane, R.; Stocco, D.; Gruwe, M.; Betev, L.; Baldisseri, A.; Vilakazi, Z.; Rapp, B.; Masoni, A.; Stoicea, G.; Brun, R

    2005-07-01

    This workshop was devoted to the computational technologies needed for the heavy quarkonia and open flavor production study at LHC (large hadron collider) experiments. These requirements are huge: peta-bytes of data will be generated each year. Analysing this will require the equivalent of a few thousands of today's fastest PC processors. The new developments in terms of dedicated software has been addressed. This document gathers the transparencies that were presented at the workshop.

  18. Micromycetes sensitiveness to heavy metals

    OpenAIRE

    O. N. Korinovskaya; V. N. Gryshko

    2011-01-01

    The sensitivity of 33 micromycete species to nitric compounds of copper, lead, zinc, nickel and cadmium has been determined. Absidia butleri Lendn, Mortierella vanesae Dixon-Stewart, Cunninghamella echinulata Thaxte, Curvularia tuberculata Jain, Cladosporium cladosporiodes (Fresen) G. A. de Vries and Fusarium solani (C. Mart.) Appel et Wollenw are sensitive to minimal content of the heavy metals (0.75 of maximum permissible concentration (MPC)) in the growth medium. At the same time Trixoderm...

  19. Heavy-ion-spectrometer system

    Energy Technology Data Exchange (ETDEWEB)

    1982-05-01

    LBL safety policy (Pub 300 Appendix E) states that every research operation with a Class A risk potential (DOE 5484.1) should identify potentially hazardous procedures associated with the operation and develop methods for accomplishing the operation safely without personnel injury or property damage. The rules and practices that management deems to be minimally necessary for the safe operations of the Heavy Ion Spectrometer System (HISS) in the Bevatron Experimental Hall (51B) are set forth in this Operation Safety Procedures (OSP).

  20. Computing for Heavy Ion Physics

    Energy Technology Data Exchange (ETDEWEB)

    Martinez, G; Schiff, D; Hristov, P; Menaud, J M; Hrivnacova, I; Poizat, P; Chabratova, G; Albin-Amiot, H; Carminati, F; Peters, A; Schutz, Y; Safarik, K; Ollitrault, J Y; Hrivnacova, I; Morsch, A; Gheata, A; Morsch, A; Vande Vyvre, P; Lauret, J; Nief, J Y; Pereira, H; Kaczmarek, O; Conesa Del Valle, Z; Guernane, R; Stocco, D; Gruwe, M; Betev, L; Baldisseri, A; Vilakazi, Z; Rapp, B; Masoni, A; Stoicea, G; Brun, R

    2005-07-01

    This workshop was devoted to the computational technologies needed for the heavy quarkonia and open flavor production study at LHC (large hadron collider) experiments. These requirements are huge: peta-bytes of data will be generated each year. Analysing this will require the equivalent of a few thousands of today's fastest PC processors. The new developments in terms of dedicated software has been addressed. This document gathers the transparencies that were presented at the workshop.

  1. Radiation from heavy ion collisions

    International Nuclear Information System (INIS)

    Kast, J.R.; Lee, Y.K.

    1975-01-01

    A study of x rays produced in heavy ion collisions has led to a search for molecular orbital x rays, concentrating on 35 Cl ions on Al, NaCl, and C targets. Preliminary analysis of the angular dependence of continuum x rays has tentatively identified quasi-molecular K x rays. Other work completed and in progress is discussed. (3 figures) (U.S.)

  2. Heavy-ion radiation chemistry

    International Nuclear Information System (INIS)

    Imamura, Masashi

    1975-01-01

    New aspect of heavy ion radiation chemistry is reviewed. Experiment has been carried out with carbon ions and nitrogen ions accelerated by a 160 cm cyclotron of the Institute of Physical and Chemical Research. The results of experiments are discussed, taking into consideration the effects of core radius depending on heavy ion energy and of the branch tracks of secondary electrons outside the core on chemical reaction and the yield of products. The effect of core size on chemical reaction was not able to be observed, because the incident energy of heavy ions was only several tens of MeV. Regarding high radical density, attention must be given to the production of oxygen in the core. It is possible to produce O 2 in the core in case of high linear energy transfer (LET), while no production of O 2 in case of low LET radiation. This may be one of study problems in future. LET effects on the yield of decomposed products were examined on acetone, methyl-ethyl-ketone and diethyl ketone, using heavy ions (C and N) as well as gamma radiation and helium ions. These three ketones showed that the LET change of two gaseous products, H 2 and CO, was THF type. There are peaks at 50-70 eV/A in the yield of both products. The peaks suggest the occurrence of ''saturation'' in decomposition. Attention was drawn to acetone containing a small amount (2 wt.%) of H 2 O. H 2 O and CO produced from this system differ from those in the pure system. The hydrogen connection formed by such a small amount of H 2 O may mediate the energy transfer. Sodium acetate tri-hydrate produces CH 3 radical selectively by gamma-ray irradiation at 77 K. In this case, the production of CH 2 COO - increases with the increase of LET of radiation. This phenomenon may be an important study problem. (Iwakiri, K.)

  3. Direction of Heavy Water Projects

    International Nuclear Information System (INIS)

    1984-07-01

    Summary of the activities performed by the Heavy Water Projects Direction of the Argentine Atomic Energy Commission from 1950 to 1983. It covers: historical data; industrial plant (based on ammonia-hydrogen isotopic exchange); experimental plant (utilizing hydrogen sulfides-water process); Module-80 plant (2-3 tons per year experimental plant with national technology) and other related tasks on research and development (E.A.C.) [es

  4. Topical and working papers on heavy water requirements and availability

    International Nuclear Information System (INIS)

    The documents included in this report are: Heavy water requirements and availability; technological infrastructure for heavy water plants; heavy water plant siting; hydrogen and methane availability; economics of heavy water production; monothermal, water fed heavy water process based on the ammonia/hydrogen isotopic exchange; production strategies to meet demand projections; hydrogen availability; deuterium sources; the independent UHDE heavy water process

  5. Beam modulation for heavy ion radiotherapy

    International Nuclear Information System (INIS)

    Kanai, T.; Minohara, S.; Sudou, M.

    1993-01-01

    The first clinical trial of heavy ion radiation therapy is scheduled in 1994 by using the heavy ion medical accelerator in Chiba (HIMAC). In order to start the clinical trial, first, it is necessary to know the physical characteristics of high energy heavy ions in human bodies, for example, dose and linear energy transfer (LET) distribution. Also the knowledge on the biological effectiveness of heavy ions is required. Based on these biophysical properties of heavy ions, monoenergetic heavy ion beam should be modulated so as to make the spread Bragg peak suitable to heavy ion radiation therapy. In order to establish a methodology to obtain the most effective spread Bragg peak for heavy ion radiation therapy, a heavy ion irradiation port at the RIKEN ring cyclotron facility was constructed. By using a 135 MeV/u carbon beam, the biophysical properties of the heavy ions were investigated, and a range modulator was designed to have uniform biological response in the spread Bragg peak. The physical and biological rationality of the spread Bragg peak were investigated. The dose, LET and biological effect of a monoenergetic heavy ion beam, the design of the range modulator, and the distributions of LET and biological dose for the spread Bragg peak are reported. (K.I.)

  6. Progress Toward Heavy Ion IFE

    International Nuclear Information System (INIS)

    Meier, W.R.; Logan, B.G.; Waldron, W.L.; Sabbi, G.L.; Callahan-Miller, D.A.; Peterson, P.F.; Goodin, D.T.

    2002-01-01

    Successful development of Heavy Ion Fusion (HIF) will require scientific and technology advances in areas of targets, drivers and chambers. Design work on heavy ion targets indicates that high gain (60-130) may be possible with a -3-6 MJ driver depending on the ability to focus the beams to small spot sizes. Significant improvements have been made on key components of heavy ion drivers, including sources, injectors, insulators and ferromagnetic materials for long-pulse induction accelerator cells, solid-state pulsers, and superconducting quadrupole magnets. The leading chamber concept for HIF is the thick-liquid-wall HYLEE-II design, which uses an array of flibe jets to protect chamber structures from x-ray, debris, and neutron damage. Significant progress has been made in demonstrating the ability to create and control the types of flow needed to form the protective liquid blanket. Progress has also been made on neutron shielding for the final focus magnet arrays with predicted lifetimes now exceeding the life of the power plant. Safety analyses have been completed for the HYLEE-II design using state-of-the-art codes. Work also continues on target fabrication and injection for HE. A target injector experiment capable of > 5 Hz operation has been designed and construction will start in 2002. Methods for mass production of hohlraum targets are being evaluated with small-scale experiments and analyses. Progress in these areas will be reviewed

  7. Thorium in heavy water reactors

    International Nuclear Information System (INIS)

    Andersson, G.

    1984-12-01

    Advanced heavy water reactors can provide energy on a global scale beyond the foreseeable future. Their economic and safety features are promising: 1. The theoretical feasibility of the Self Sufficient Equilibrium Thorium (SSET) concept is confirmed by new calculations. Calculations show that the adjuster rod geometry used in natural uranium CANDU reactors is adequate also for SSET if the absorption in the rods is graded. 2. New fuel bundle designs can permit substantially higher power output from a CANDU reactor. The capital cost for fuel, heavy water and mechanical equipment can thereby be greatly reduced. Progress is possible with the traditional fuel material oxide, but the use of thorium metal gives much larger effects. 3. A promising long range possibility is to use pressure tanks instead of pressure tubes. Heat removal from the core is facilitated. Negative temperature and void coefficients provide inherent safety features. Refuelling under power is no longer needed if control by moderator displacement is used. Reduced quality demand on the fuel permits lower fuel costs. The neutron economy is improved by the absence of pressure and clandria tubes and also by the use of radial and axial blankets. A modular seed blanket design can reduce the Pa losses. The experience from construction of tank designs is good e.g. AAgesta, Attucha. It is now also possible to utilize technology from LWR reactors and the implementation of advanced heavy water reactors would thus be easier than HTR or LMFBR systems. (Author)

  8. Stable Heavy Hadrons in ATLAS

    CERN Document Server

    Mackeprang, Rasmus

    2007-01-01

    Several extensions to the SM feature heavy long-lived particles with masses of O(10^2-10^3 GeV) and mean lifetimes fulfilling $CT \\geq 10m$. Among such theories are supersymmetric scenarios as well as extra-dimensional models in which the heavy new particles are seen as Kaluza-Klein excitations of the well-known SM particles. Such particles will, from the point of view of a collider experiment be seen as stable. This thesis is concerned with the case where the exotic heavy particles emph{can} be considered stable while traversing the detector. Specifically the case is considered where the particles in question carry the charge of the strong nuclear force, commonly referred to as emph{colour charge}. A simulation kit has been developed using GEANT4. This framework is the current standard in experimental particle physics for the simulation of interactions of particles with matter, and it is used extensively for detector simulation. The simulation describes the interactions of these particles with matter which i...

  9. Fuel and heavy water availability

    International Nuclear Information System (INIS)

    1980-01-01

    The general guidelines for the Working Group's evaluation of the availability of nuclear fuel and heavy water were set at the Organizing Conference of the International Nuclear Fuel Cycle Evaluation (INFCE), which was held in Washington, United States of America, 19-21 October 1977. The agreed technical and economic scope for the evaluation was to: (1) Estimate needs for nuclear energy and correlated needs for uranium and heavy water according to different fuel cycle strategies; (2) Review uranium availability with specific regard to: Assessment of resources and production capacities; policies and incentives for encouraging exploration and production including joint ventures; marketing policies and/or guarantees of sales for companies investing in exploration and production; marketing policies and/or guarantees of supply for utilities; technical development of exploration, mining and milling methods; (3) Review heavy water availability; (4) Review thorium availability; (5) Consider special needs of developing countries. The illustrations of availability and requirements developed in this report do provide a useful framework for considering future options and alternatives for the development of nuclear power

  10. Repression of meiotic genes by antisense transcription and by Fkh2 transcription factor in Schizosaccharomyces pombe.

    Science.gov (United States)

    Chen, Huei-Mei; Rosebrock, Adam P; Khan, Sohail R; Futcher, Bruce; Leatherwood, Janet K

    2012-01-01

    In S. pombe, about 5% of genes are meiosis-specific and accumulate little or no mRNA during vegetative growth. Here we use Affymetrix tiling arrays to characterize transcripts in vegetative and meiotic cells. In vegetative cells, many meiotic genes, especially those induced in mid-meiosis, have abundant antisense transcripts. Disruption of the antisense transcription of three of these mid-meiotic genes allowed vegetative sense transcription. These results suggest that antisense transcription represses sense transcription of meiotic genes in vegetative cells. Although the mechanism(s) of antisense mediated transcription repression need to be further explored, our data indicates that RNAi machinery is not required for repression. Previously, we and others used non-strand specific methods to study splicing regulation of meiotic genes and concluded that 28 mid-meiotic genes are spliced only in meiosis. We now demonstrate that the "unspliced" signal in vegetative cells comes from the antisense RNA, not from unspliced sense RNA, and we argue against the idea that splicing regulates these mid-meiotic genes. Most of these mid-meiotic genes are induced in mid-meiosis by the forkhead transcription factor Mei4. Interestingly, deletion of a different forkhead transcription factor, Fkh2, allows low levels of sense expression of some mid-meiotic genes in vegetative cells. We propose that vegetative expression of mid-meiotic genes is repressed at least two independent ways: antisense transcription and Fkh2 repression.

  11. Repression of Meiotic Genes by Antisense Transcription and by Fkh2 Transcription Factor in Schizosaccharomyces pombe

    Science.gov (United States)

    Chen, Huei-Mei; Rosebrock, Adam P.; Khan, Sohail R.; Futcher, Bruce; Leatherwood, Janet K.

    2012-01-01

    In S. pombe, about 5% of genes are meiosis-specific and accumulate little or no mRNA during vegetative growth. Here we use Affymetrix tiling arrays to characterize transcripts in vegetative and meiotic cells. In vegetative cells, many meiotic genes, especially those induced in mid-meiosis, have abundant antisense transcripts. Disruption of the antisense transcription of three of these mid-meiotic genes allowed vegetative sense transcription. These results suggest that antisense transcription represses sense transcription of meiotic genes in vegetative cells. Although the mechanism(s) of antisense mediated transcription repression need to be further explored, our data indicates that RNAi machinery is not required for repression. Previously, we and others used non-strand specific methods to study splicing regulation of meiotic genes and concluded that 28 mid-meiotic genes are spliced only in meiosis. We now demonstrate that the “unspliced” signal in vegetative cells comes from the antisense RNA, not from unspliced sense RNA, and we argue against the idea that splicing regulates these mid-meiotic genes. Most of these mid-meiotic genes are induced in mid-meiosis by the forkhead transcription factor Mei4. Interestingly, deletion of a different forkhead transcription factor, Fkh2, allows low levels of sense expression of some mid-meiotic genes in vegetative cells. We propose that vegetative expression of mid-meiotic genes is repressed at least two independent ways: antisense transcription and Fkh2 repression. PMID:22238674

  12. Repression of meiotic genes by antisense transcription and by Fkh2 transcription factor in Schizosaccharomyces pombe.

    Directory of Open Access Journals (Sweden)

    Huei-Mei Chen

    Full Text Available In S. pombe, about 5% of genes are meiosis-specific and accumulate little or no mRNA during vegetative growth. Here we use Affymetrix tiling arrays to characterize transcripts in vegetative and meiotic cells. In vegetative cells, many meiotic genes, especially those induced in mid-meiosis, have abundant antisense transcripts. Disruption of the antisense transcription of three of these mid-meiotic genes allowed vegetative sense transcription. These results suggest that antisense transcription represses sense transcription of meiotic genes in vegetative cells. Although the mechanism(s of antisense mediated transcription repression need to be further explored, our data indicates that RNAi machinery is not required for repression. Previously, we and others used non-strand specific methods to study splicing regulation of meiotic genes and concluded that 28 mid-meiotic genes are spliced only in meiosis. We now demonstrate that the "unspliced" signal in vegetative cells comes from the antisense RNA, not from unspliced sense RNA, and we argue against the idea that splicing regulates these mid-meiotic genes. Most of these mid-meiotic genes are induced in mid-meiosis by the forkhead transcription factor Mei4. Interestingly, deletion of a different forkhead transcription factor, Fkh2, allows low levels of sense expression of some mid-meiotic genes in vegetative cells. We propose that vegetative expression of mid-meiotic genes is repressed at least two independent ways: antisense transcription and Fkh2 repression.

  13. Multifunctional role of the transcription factor Blimp1 in coordinating plasma cell differentiation

    Science.gov (United States)

    Minnich, Martina; Tagoh, Hiromi; Bönelt, Peter; Axelsson, Elin; Fischer, Maria; Cebolla, Beatriz; Tarakhovsky, Alexander; Nutt, Stephen L.; Jaritz, Markus; Busslinger, Meinrad

    2018-01-01

    Blimp1 is an essential regulator of plasma cells. Here we studied its functions in plasmablast differentiation by identifying regulated Blimp1 target genes. Blimp1 promoted plasmablast migration and adhesion. It repressed several transcription factor genes and Aicda, thus silencing B-cell-specific gene expression, antigen presentation and class switch recombination in plasmablasts. It directly activated genes, leading to increased expression of the plasma cell regulator IRF4 and proteins involved in immunoglobulin secretion. Blimp1 induced immunoglobulin gene transcription by controlling Igh and Igk 3’ enhancers and regulated the posttranscriptional expression switch from the membrane-bound to secreted immunoglobulin heavy-chain by activating Ell2. Notably, Blimp1 recruited chromatin-remodeling and histone-modifying complexes to regulate its target genes. Hence, many essential functions of plasma cells are under Blimp1 control. PMID:26779602

  14. Evolution of Metal(Loid) Binding Sites in Transcriptional Regulators

    Energy Technology Data Exchange (ETDEWEB)

    Ordonez, E.; Thiyagarajan, S.; Cook, J.D.; Stemmler, T.L.; Gil, J.A.; Mateos, L.M.; Rosen, B.P.

    2009-05-22

    Expression of the genes for resistance to heavy metals and metalloids is transcriptionally regulated by the toxic ions themselves. Members of the ArsR/SmtB family of small metalloregulatory proteins respond to transition metals, heavy metals, and metalloids, including As(III), Sb(III), Cd(II), Pb(II), Zn(II), Co(II), and Ni(II). These homodimeric repressors bind to DNA in the absence of inducing metal(loid) ion and dissociate from the DNA when inducer is bound. The regulatory sites are often three- or four-coordinate metal binding sites composed of cysteine thiolates. Surprisingly, in two different As(III)-responsive regulators, the metalloid binding sites were in different locations in the repressor, and the Cd(II) binding sites were in two different locations in two Cd(II)-responsive regulators. We hypothesize that ArsR/SmtB repressors have a common backbone structure, that of a winged helix DNA-binding protein, but have considerable plasticity in the location of inducer binding sites. Here we show that an As(III)-responsive member of the family, CgArsR1 from Corynebacterium glutamicum, binds As(III) to a cysteine triad composed of Cys{sup 15}, Cys{sup 16}, and Cys{sup 55}. This binding site is clearly unrelated to the binding sites of other characterized ArsR/SmtB family members. This is consistent with our hypothesis that metal(loid) binding sites in DNA binding proteins evolve convergently in response to persistent environmental pressures.

  15. In silico and wet lab approaches to study transcriptional regulation

    NARCIS (Netherlands)

    Hestand, Matthew Scott

    2010-01-01

    Gene expression is a complicated process with multiple types of regulation, including binding of proteins termed transcription factors. This thesis looks at transcription factors and transcription factor binding site discovery through computational predictions and wet lab work to better elucidate

  16. Comparison of Transcription Factor Binding Site Models

    KAUST Repository

    Bhuyan, Sharifulislam

    2012-05-01

    Modeling of transcription factor binding sites (TFBSs) and TFBS prediction on genomic sequences are important steps to elucidate transcription regulatory mechanism. Dependency of transcription regulation on a great number of factors such as chemical specificity, molecular structure, genomic and epigenetic characteristics, long distance interaction, makes this a challenging problem. Different experimental procedures generate evidence that DNA-binding domains of transcription factors show considerable DNA sequence specificity. Probabilistic modeling of TFBSs has been moderately successful in identifying patterns from a family of sequences. In this study, we compare performances of different probabilistic models and try to estimate their efficacy over experimental TFBSs data. We build a pipeline to calculate sensitivity and specificity from aligned TFBS sequences for several probabilistic models, such as Markov chains, hidden Markov models, Bayesian networks. Our work, containing relevant statistics and evaluation for the models, can help researchers to choose the most appropriate model for the problem at hand.

  17. Battles and hijacks: Noncoding transcription in plants

    KAUST Repository

    Ariel, Federico; Romero-Barrios, Natali; Jé gu, Teddy; Benhamed, Moussa; Crespi, Martin

    2015-01-01

    splicing, fine-tuning of miRNA activity, and the control of mRNA translation or accumulation. Recently, dual noncoding transcription by alternative RNA polymerases was implicated in epigenetic and chromatin conformation dynamics. This review integrates

  18. Salmonella Typhimurium transcription profiles in space flight

    Data.gov (United States)

    National Aeronautics and Space Administration — Salmonella transcription profiles were obtained from samples flown on space shuttle mission STS-115 and compared to profiles from Salmonella grown under identical...

  19. Transcript for Understanding Medical Words: A Tutorial

    Science.gov (United States)

    ... medlineplus.gov/medicalwordstranscript.html Transcript for Understanding Medical Words: A Tutorial To use the sharing features on ... get to what those mean in a minute. Word Roots Word Roots. Let's begin with body parts. ...

  20. A unified architecture of transcriptional regulatory elements

    DEFF Research Database (Denmark)

    Andersson, Robin; Sandelin, Albin Gustav; Danko, Charles G.

    2015-01-01

    Gene expression is precisely controlled in time and space through the integration of signals that act at gene promoters and gene-distal enhancers. Classically, promoters and enhancers are considered separate classes of regulatory elements, often distinguished by histone modifications. However...... and enhancers are considered a single class of functional element, with a unified architecture for transcription initiation. The context of interacting regulatory elements and the surrounding sequences determine local transcriptional output as well as the enhancer and promoter activities of individual elements....

  1. Transcriptional Waves in the Yeast Cell Cycle

    OpenAIRE

    Oliva, Anna; Rosebrock, Adam; Ferrezuelo, Francisco; Pyne, Saumyadipta; Chen, Haiying; Skiena, Steve; Futcher, Bruce; Leatherwood, Janet

    2005-01-01

    Many genes are regulated as an innate part of the eukaryotic cell cycle, and a complex transcriptional network helps enable the cyclic behavior of dividing cells. This transcriptional network has been studied in Saccharomyces cerevisiae (budding yeast) and elsewhere. To provide more perspective on these regulatory mechanisms, we have used microarrays to measure gene expression through the cell cycle of Schizosaccharomyces pombe (fission yeast). The 750 genes with the most significant oscillat...

  2. Transcriptional and phylogenetic analysis of five complete ambystomatid salamander mitochondrial genomes.

    Science.gov (United States)

    Samuels, Amy K; Weisrock, David W; Smith, Jeramiah J; France, Katherine J; Walker, John A; Putta, Srikrishna; Voss, S Randal

    2005-04-11

    We report on a study that extended mitochondrial transcript information from a recent EST project to obtain complete mitochondrial genome sequence for 5 tiger salamander complex species (Ambystoma mexicanum, A. t. tigrinum, A. andersoni, A. californiense, and A. dumerilii). We describe, for the first time, aspects of mitochondrial transcription in a representative amphibian, and then use complete mitochondrial sequence data to examine salamander phylogeny at both deep and shallow levels of evolutionary divergence. The available mitochondrial ESTs for A. mexicanum (N=2481) and A. t. tigrinum (N=1205) provided 92% and 87% coverage of the mitochondrial genome, respectively. Complete mitochondrial sequences for all species were rapidly obtained by using long distance PCR and DNA sequencing. A number of genome structural characteristics (base pair length, base composition, gene number, gene boundaries, codon usage) were highly similar among all species and to other distantly related salamanders. Overall, mitochondrial transcription in Ambystoma approximated the pattern observed in other vertebrates. We inferred from the mapping of ESTs onto mtDNA that transcription occurs from both heavy and light strand promoters and continues around the entire length of the mtDNA, followed by post-transcriptional processing. However, the observation of many short transcripts corresponding to rRNA genes indicates that transcription may often terminate prematurely to bias transcription of rRNA genes; indeed an rRNA transcription termination signal sequence was observed immediately following the 16S rRNA gene. Phylogenetic analyses of salamander family relationships consistently grouped Ambystomatidae in a clade containing Cryptobranchidae and Hynobiidae, to the exclusion of Salamandridae. This robust result suggests a novel alternative hypothesis because previous studies have consistently identified Ambystomatidae and Salamandridae as closely related taxa. Phylogenetic analyses of tiger

  3. Linking Core Promoter Classes to Circadian Transcription.

    Directory of Open Access Journals (Sweden)

    Pål O Westermark

    2016-08-01

    Full Text Available Circadian rhythms in transcription are generated by rhythmic abundances and DNA binding activities of transcription factors. Propagation of rhythms to transcriptional initiation involves the core promoter, its chromatin state, and the basal transcription machinery. Here, I characterize core promoters and chromatin states of genes transcribed in a circadian manner in mouse liver and in Drosophila. It is shown that the core promoter is a critical determinant of circadian mRNA expression in both species. A distinct core promoter class, strong circadian promoters (SCPs, is identified in mouse liver but not Drosophila. SCPs are defined by specific core promoter features, and are shown to drive circadian transcriptional activities with both high averages and high amplitudes. Data analysis and mathematical modeling further provided evidence for rhythmic regulation of both polymerase II recruitment and pause release at SCPs. The analysis provides a comprehensive and systematic view of core promoters and their link to circadian mRNA expression in mouse and Drosophila, and thus reveals a crucial role for the core promoter in regulated, dynamic transcription.

  4. TAF(II)250: a transcription toolbox.

    Science.gov (United States)

    Wassarman, D A; Sauer, F

    2001-08-01

    Activation of RNA-polymerase-II-dependent transcription involves conversion of signals provided by gene-specific activator proteins into the synthesis of messenger RNA. This conversion requires dynamic structural changes in chromatin and assembly of general transcription factors (GTFs) and RNA polymerase II at core promoter sequence elements surrounding the transcription start site of genes. One hallmark of transcriptional activation is the interaction of DNA-bound activators with coactivators such as the TATA-box binding protein (TBP)-associated factors (TAF(II)s) within the GTF TFIID. TAF(II)250 possesses a variety of activities that are likely to contribute to the initial steps of RNA polymerase II transcription. TAF(II)250 is a scaffold for assembly of other TAF(II)s and TBP into TFIID, TAF(II)250 binds activators to recruit TFIID to particular promoters, TAF(II)250 regulates binding of TBP to DNA, TAF(II)250 binds core promoter initiator elements, TAF(II)250 binds acetylated lysine residues in core histones, and TAF(II)250 possesses protein kinase, ubiquitin-activating/conjugating and acetylase activities that modify histones and GTFs. We speculate that these activities achieve two goals--(1) they aid in positioning and stabilizing TFIID at particular promoters, and (2) they alter chromatin structure at the promoter to allow assembly of GTFs--and we propose a model for how TAF(II)250 converts activation signals into active transcription.

  5. A biophysical model for transcription factories

    International Nuclear Information System (INIS)

    Canals-Hamann, Ana Z; Neves, Ricardo Pires das; Reittie, Joyce E; Iñiguez, Carlos; Soneji, Shamit; Enver, Tariq; Buckle, Veronica J; Iborra, Francisco J

    2013-01-01

    Transcription factories are nuclear domains where gene transcription takes place although the molecular basis for their formation and maintenance are unknown. In this study, we explored how the properties of chromatin as a polymer may contribute to the structure of transcription factories. We found that transcriptional active chromatin contains modifications like histone H4 acetylated at Lysine 16 (H4K16ac). Single fibre analysis showed that this modification spans the entire body of the gene. Furthermore, H4K16ac genes cluster in regions up to 500 Kb alternating active and inactive chromatin. The introduction of H4K16ac in chromatin induces stiffness in the chromatin fibre. The result of this change in flexibility is that chromatin could behave like a multi-block copolymer with repetitions of stiff-flexible (active-inactive chromatin) components. Copolymers with such structure self-organize through spontaneous phase separation into microdomains. Consistent with such model H4K16ac chromatin form foci that associates with nascent transcripts. We propose that transcription factories are the result of the spontaneous concentration of H4K16ac chromatin that are in proximity, mainly in cis

  6. Intrinsic terminators in Mycoplasma hyopneumoniae transcription.

    Science.gov (United States)

    Fritsch, Tiago Ebert; Siqueira, Franciele Maboni; Schrank, Irene Silveira

    2015-04-08

    Mycoplasma hyopneumoniae, an important pathogen of swine, exhibits a low guanine and cytosine (GC) content genome. M. hyopneumoniae genome is organised in long transcriptional units and promoter sequences have been mapped upstream of all transcription units. These analysis provided insights into the gene organisation and transcription initiation at the genome scale. However, the presence of transcriptional terminator sequences in the M. hyopneumoniae genome is poorly understood. In silico analyses demonstrated the presence of putative terminators in 82% of the 33 monocistronic units (mCs) and in 74% of the 116 polycistronic units (pCs) considering different classes of terminators. The functional activity of 23 intrinsic terminators was confirmed by RT-PCR and qPCR. Analysis of all terminators found by three software algorithms, combined with experimental results, allowed us to propose a pattern of RNA hairpin formation during the termination process and to predict the location of terminators in the M. hyopneumoniae genome sequence. The stem-loop structures of intrinsic terminators of mycoplasma diverge from the pattern of terminators found in other bacteria due the low content of guanine and cytosine. In M. hyopneumoniae, transcription can end after a transcriptional unit and before its terminator sequence and can also continue past the terminator sequence with RNA polymerases gradually releasing the RNA.

  7. Drying of heavy water system and works of charging heavy water in Fugen

    International Nuclear Information System (INIS)

    Matsushita, Tadashi; Iijima, Setsuo

    1980-01-01

    The advanced thermal reactor ''Fugen'' is the first heavy water-moderated, boiling light water-cooled nuclear reactor for power generation in Japan. It is a large heavy water reactor having about 130 m 3 of heavy water inventory and about 300 m 3 of helium space as the cover gas of the heavy water system. The heavy water required was purchased from FRG, which had been used for the power output test in the KKN, and the quality was 99.82 mol % mean heavy water concentration. The concentration of heavy water for Fugen used for the nuclear design is 99.70 mol%, and it was investigated how heavy water can be charged without lowering the concentration. The matters of investigation include the method of bringing the heavy water and helium system to perfect dryness after washing and light water test, the method of confirming the sufficient dryness to prevent the deterioration, and the method of charging heavy water safely from its containers. On the basis of the results of investigation, the actual works were started. The works of drying the heavy water and helium system by vacuum drying, the works of sampling heavy water and the result of the degree of deterioration, and the works of charging heavy water and the measures to the heavy water remaing in the containers are described. All the works were completed safely and smoothly. (J.P.N.)

  8. MADS-box gene evolution - structure and transcription patterns

    DEFF Research Database (Denmark)

    Johansen, Bo; Pedersen, Louise Buchholt; Skipper, Martin

    2002-01-01

    Mads-box genes, ABC model, Evolution, Phylogeny, Transcription patterns, Gene structure, Conserved motifs......Mads-box genes, ABC model, Evolution, Phylogeny, Transcription patterns, Gene structure, Conserved motifs...

  9. Biosolids and heavy metals in soils

    Directory of Open Access Journals (Sweden)

    Silveira Maria Lucia Azevedo

    2003-01-01

    Full Text Available The application of sewage sludge or biosolids on soils has been widespread in agricultural areas. However, depending on their characteristics, they may cause increase in heavy metal concentration of treated soils. In general, domestic biosolids have lower heavy metal contents than industrial ones. Origin and treatment method of biosolids may markedly influence their characteristics. The legislation that controls the levels of heavy metal contents in biosolids and the maximum concentrations in soils is still controversial. In the long-term, heavy metal behavior after the and of biosolid application is still unknown. In soils, heavy metals may be adsorbed via specific or non-specific adsorption reactions. Iron oxides and organic matter are the most important soil constituents retaining heavy metals. The pH, CEC and the presence of competing ions also affect heavy metal adsorption and speciation in soils. In solution, heavy metals can be present either as free-ions or complexed with organic and inorganic ligands. Generally, free-ions are more relevant in environmental pollution studies since they are readily bioavailable. Some computer models can estimate heavy metal activity in solution and their ionic speciation. Thermodynamic data (thermodynamic stability constant, total metal and ligand concentrations are used by the GEOCHEM-PC program. This program allows studying heavy metal behavior in solution and the effect of changes in the conditions, such as pH and ionic strength and the application of organic and inorganic ligands caused by soil fertilization.

  10. Dynamic analysis of stochastic transcription cycles.

    Directory of Open Access Journals (Sweden)

    Claire V Harper

    2011-04-01

    Full Text Available In individual mammalian cells the expression of some genes such as prolactin is highly variable over time and has been suggested to occur in stochastic pulses. To investigate the origins of this behavior and to understand its functional relevance, we quantitatively analyzed this variability using new mathematical tools that allowed us to reconstruct dynamic transcription rates of different reporter genes controlled by identical promoters in the same living cell. Quantitative microscopic analysis of two reporter genes, firefly luciferase and destabilized EGFP, was used to analyze the dynamics of prolactin promoter-directed gene expression in living individual clonal and primary pituitary cells over periods of up to 25 h. We quantified the time-dependence and cyclicity of the transcription pulses and estimated the length and variation of active and inactive transcription phases. We showed an average cycle period of approximately 11 h and demonstrated that while the measured time distribution of active phases agreed with commonly accepted models of transcription, the inactive phases were differently distributed and showed strong memory, with a refractory period of transcriptional inactivation close to 3 h. Cycles in transcription occurred at two distinct prolactin-promoter controlled reporter genes in the same individual clonal or primary cells. However, the timing of the cycles was independent and out-of-phase. For the first time, we have analyzed transcription dynamics from two equivalent loci in real-time in single cells. In unstimulated conditions, cells showed independent transcription dynamics at each locus. A key result from these analyses was the evidence for a minimum refractory period in the inactive-phase of transcription. The response to acute signals and the result of manipulation of histone acetylation was consistent with the hypothesis that this refractory period corresponded to a phase of chromatin remodeling which significantly

  11. A deeper look into transcription regulatory code by preferred pair distance templates for transcription factor binding sites

    KAUST Repository

    Kulakovskiy, Ivan V.; Belostotsky, A. A.; Kasianov, Artem S.; Esipova, Natalia G.; Medvedeva, Yulia; Eliseeva, Irina A.; Makeev, Vsevolod J.

    2011-01-01

    Motivation: Modern experimental methods provide substantial information on protein-DNA recognition. Studying arrangements of transcription factor binding sites (TFBSs) of interacting transcription factors (TFs) advances understanding

  12. Superconducting heavy-ion linacs

    International Nuclear Information System (INIS)

    Bollinger, L.M.

    1977-01-01

    A summary is given of plans developed by four different groups for the construction of small superconducting linacs to boost the energy of heavy ions from existing tandem electrostatic accelerators. The projects considered are the linac under construction at Argonne and the design efforts at Karlsruhe, at Stanford, and by a Cal Tech-Stony Brook collaboration. The intended uses of the accelerator systems are stated. Beam dynamics of linacs formed of short independently-phased resonators are reviewed, and the implications for performance are discussed. The main parameters of the four linacs are compared, and a brief analysis of accelerating structures is given

  13. Muon studies of heavy fermions

    International Nuclear Information System (INIS)

    Heffner, R.H.

    1991-01-01

    Recent muon spin relaxation (μSR) studies have been particularly effective in revealing important properties of the unusual magnetism and superconductivity found in heavy fermion (HF) systems. In this paper μSR experiments elucidating the symmetry of superconducting order parameter in UPt 3 and UBe 13 doped with thorium and reviewed. Also discussed is the correlation between the enhanced superconducting specific heat jump and the reduced Kondo temperature in B-doped UBe 13 , indicating possible direct experimental evidence for a magnetic pairing mechanism in HF superconductors. 23 refs., 3 figs

  14. Neutron moderation in heavy water

    International Nuclear Information System (INIS)

    Assis, J.T. de.

    1980-03-01

    The calculation of the energetic spectrum of thermic neutrons in heavy water, according to the models of the differential cross section; is presented. Simplifications in the Butler model are suggested for the diminution of computer time. The results obtained are compared with experimental data and with the Brown - St.John model. This calculation has been done in 30 energy groups and within our limit of precision, the results with the models and simplifications present satisfactory values, allowing its inclusion in reactor codes. (Author) [pt

  15. Nucleon transfer between heavy nuclei

    International Nuclear Information System (INIS)

    Von Oertzen, W.

    1984-02-01

    Nucleon transfer reactions between heavy nuclei are characterized by the classical behaviour of the scattering orbits. Thus semiclassical concepts are well suited for the description of these reactions. In the present contribution the characteristics of single and multinucleon transfer reactions at energies below and above the Coulomb barrier are shown for systems like Sn+Sn, Xe+U and Ni+Pb. The role of the pairing interaction in the transfer of nucleon pairs is illustrated. For strong transitions the coupling of channels and the absorption into more complicated channels is taken into account in a coupled channels calculation

  16. Heavy flavour decays at LEP

    CERN Document Server

    Rousseau, D H

    2001-01-01

    Recent heavy flavour results from LEP experiments are presented. Special emphasis is put on complex inclusive B reconstruction methods with high potentialities for lifetime, mixing, CP violation studies and new measurements of IVubl· The new world average of r8-f'r8o is 1.08 ± 0.03. The new world average of Re parameter measured in inclusive B0 decay is 0.001 ± 0.009. The new LEP average of JV ub I measured from inclusive b->ulv branching fraction is 4.

  17. Lifetimes of heavy flavour particles

    International Nuclear Information System (INIS)

    Forty, R.

    1994-01-01

    The lifetimes of heavy-flavour hadrons are reviewed. After a brief discussion of the theoretical predictions, the problem of averaging lifetime measurements is discussed. The various experimental measurements are then presented and suitable averages performed. Charmed meson lifetimes are now measured to the few percent level, better that theory can predict, whilst for charmed baryons the lifetime hierarchy has been established for the first time. For beauty hadrons the lifetimes are measured at the 6-10 % level, and are in reasonable agreement with theoretical expectations. Beauty baryon studies ar just beginning. (author)

  18. Heavy meson form factors from QCD

    International Nuclear Information System (INIS)

    Falk, A.F.; Georgi, H.; Grinstein, B.

    1990-01-01

    We calculate the leading QCD radiative corrections to the relations which follow from the decoupling of the heavy quark spin as the quark mass goes infinity and from the symmetry between systems with different heavy quarks. One of the effects we calculate gives the leading q 2 -dependence of the form factor of a heavy quark, which in turn dominates the q 2 -dependence of the form factors of bound states of the heavy quark with light quarks. This, combined with the normalization of the form factor provided by symmetry, gives us a first principles calculation of the heavy meson (or baryon) form factors in the limit of very large heavy quark mass. (orig.)

  19. Oil Spill Related Heavy Metal: A Review

    International Nuclear Information System (INIS)

    Ahmad Dasuki Mustafa; Hafizan Juahir; Kamaruzzaman Yunus; Mohammad Azizi Amran; Che Noraini Che Hasnam; Fazureen Azaman; Ismail Zainal Abidin; Syahril Hirman Azmee; Nur Hishaam Sulaiman

    2015-01-01

    Oil spill occurs every day worldwide and oil contamination is a significant contributor for the higher levels of heavy metals in the environment. This study is purposely to summarize the heavy metals which significant to major oil spill incidents around the world and effects of toxic metals to human health. The study performed a comprehensive review of relevant scientific journal articles and government documents concerning heavy metals contamination and oil spills. Overall, the heavy metals most frequently been detected in oil spill related study where Pb>Ni>V>Zn>Cd and caused many effects to human health especially cancer. In conclusion, the comparison of heavy metal level between the post - spill and baseline levels must be done, and implementation of continuous monitoring of heavy metal. In addition, the result based on the strategies must be transparent to public in order to maintaining human health. (author)

  20. Heavy Water Quality Management in HANARO

    Energy Technology Data Exchange (ETDEWEB)

    Shin, Ho Chul; Lee, Mun; Kim, Hi Gon; Park, Chan Young; Choi, Ho Young; Hur, Soon Ock; Ahn, Guk Hoon

    2008-12-15

    Heavy water quality management in the reflector tank is a very important element to maintain the good thermal neutron flux and to ensure the performance of reflector cooling system. This report is written to provide a guidance for the future by describing the history of the heavy water quality management during HANARO operation. The heavy water quality in the reflector tank has been managed by measuring the electrical conductivity at the inlet and outlet of the ion exchanger and by measuring pH of the heavy water. In this report, the heavy water quality management activities performed in HANARO from 1996 to 2007 ere described including a basic theory of the heavy water quality management, exchanging history of used resin in the reflector cooling system, measurement data of the pH and the electrical conductivity, and operation history of the reflector cooling system.

  1. Heavy flavour production in perturbative QCD

    International Nuclear Information System (INIS)

    Nason, P.; Ridolfi, G.; Frixione, S.; Mangano, M.L.

    1994-01-01

    The status of heavy flavour production in QCD is reviewed. Recent results on the doubly-differential cross section are discussed for the photoproduction of heavy flavours. Comparison of experimental results with theoretical calculation is discussed both for b production at hadron colliders and c production in fixed-target hadroproduction and photoproduction. The possibility of using photoproduction of heavy flavour in order to determine the gluon density in the proton is also discussed. (author). 38 refs., 8 figs

  2. Summary of the relativistic heavy ion sessions

    International Nuclear Information System (INIS)

    Harris, J.W.

    1988-01-01

    The topics covered in the Relativistic Heavy Ion Sessions span four orders of magnitude in energy in the laboratory and a few more in theory. In the two years since the last Intersections conference, experiments in the field of very high energy heavy ion research have begun at CERN and Brookhaven. The prime motivation for these experiments is the possibility of forming quark matter. This paper is a review of the topics covered in the Relativistic Heavy Ion Sessions

  3. International cooperation in heavy-ion research

    International Nuclear Information System (INIS)

    Tobias, C.A.

    1980-01-01

    The rapidly growing research applications of heavy ions in basic biology and medicine have stimulated interest in this field in many countries. LBL, with its unique facilities and its scientific programs, is the focal point of interest. Plans are underway in several countries, including France, Japan, West Germany, and Canada, to build heavy-ion facilities, and to collaborate with our staff at LBL in heavy-ion research in physics, biology, and medicine

  4. Heavy vehicle pitch dynamics and suspension tuning

    OpenAIRE

    Cao, Dongpu; Rakheja, Subhash; Su, Chun-Yi

    2008-01-01

    The influence of suspension tuning of passenger cars on bounce and pitch ride performance has been explored in a number of studies, while only minimal efforts have been made for establishing similar rules for heavy vehicles. This study aims to explore pitch dynamics and suspension tunings of a two-axle heavy vehicle with unconnected suspension, which could also provide valuable information for heavy vehicles with coupled suspensions. Based on a generalised pitch-plane model of a two-axle heav...

  5. The Heavy Baryon Physics by means LEP

    International Nuclear Information System (INIS)

    Lesiak, T.

    2000-07-01

    This report describes the experimental research about the heavy baryons which were obtained in the last decade at LEP. The most important among them concern the lifetimes of beauty baryons. The methods of theoretical description of heavy hadrons together with the LEP experimental apparatus are also discussed. Heavy baryon studies are shown in a broader perspective of other LEP results: the test of the standard model and the latest measurements concerning the beauty mesons. (author)

  6. Heavy quarks and their experimental consequences

    International Nuclear Information System (INIS)

    Appelquist, T.

    1975-09-01

    Recent theoretical work on heavy quark dynamics is reviewed. In the context of a color gauge theory of strong interactions, the structure of heavy quark-antiquark bound states and their decay properties is discussed. The emphasis is on the dynamical differences between heavy and light quark bound states. It is suggested that the former will more directly reflect the structure of the underlying field theory

  7. Heat exchangers in heavy water reactor systems

    International Nuclear Information System (INIS)

    Mehta, S.K.

    1988-01-01

    Important features of some major heat exchange components of pressurized heavy water reactors and DHRUVA research reactor are presented. Design considerations and nuclear service classifications are discussed

  8. Heavy quark production in quantum chromodynamics

    International Nuclear Information System (INIS)

    Brodsky, S.J.

    1986-09-01

    For very heavy quark masses, the inclusive hadronic production of hadron pairs containing heavy quarks is predicted to be governed by QCD fusion subprocesses. For intermediate mass scales other QCD mechanisms can be important including higher-twist intrinsic contributions and low relative velocity enchancements, possibly accounting for the anomalies observed in charm hadroproduction, such as the nuclear number dependence, the longitudinal momentum distributions, and beam flavor dependence. We also discuss scaling laws for exclusive processes involving heavy quarks and diffractive excitation into heavy quark systems

  9. Production of heavy water in India

    International Nuclear Information System (INIS)

    Deshpande, P.G.; Bimbhat, K.S.; Bhargava, R.K.

    India's first heavy water plant, using electrolysis of water followed by liquid hydrogen distillation, has been operating in association with a fertilizer plant at Nangal since 1962. A dual-temperature process plant at Kota uses heat from the Rajasthan Atomic Power Station. The heavy water plants at Baroda and Tuticorin use ammonia-hydrogen exchange and are integrated with fertilizer ammonia plants. Choice of a particular process for heavy water production depends upon local conditions as well as the extent of the heavy water requirement

  10. Divergent biology of facultative heavy metal plants.

    Science.gov (United States)

    Bothe, Hermann; Słomka, Aneta

    2017-12-01

    Among heavy metal plants (the metallophytes), facultative species can live both in soils contaminated by an excess of heavy metals and in non-affected sites. In contrast, obligate metallophytes are restricted to polluted areas. Metallophytes offer a fascinating biology, due to the fact that species have developed different strategies to cope with the adverse conditions of heavy metal soils. The literature distinguishes between hyperaccumulating, accumulating, tolerant and excluding metallophytes, but the borderline between these categories is blurred. Due to the fact that heavy metal soils are dry, nutrient limited and are not uniform but have a patchy distribution in many instances, drought-tolerant or low nutrient demanding species are often regarded as metallophytes in the literature. In only a few cases, the concentrations of heavy metals in soils are so toxic that only a few specifically adapted plants, the genuine metallophytes, can cope with these adverse soil conditions. Current molecular biological studies focus on the genetically amenable and hyperaccumulating Arabidopsis halleri and Noccaea (Thlaspi) caerulescens of the Brassicaceae. Armeria maritima ssp. halleri utilizes glands for the excretion of heavy metals and is, therefore, a heavy metal excluder. The two endemic zinc violets of Western Europe, Viola lutea ssp. calaminaria of the Aachen-Liège area and Viola lutea ssp. westfalica of the Pb-Cu-ditch of Blankenrode, Eastern Westphalia, as well as Viola tricolor ecotypes of Eastern Europe, keep their cells free of excess heavy metals by arbuscular mycorrhizal fungi which bind heavy metals. The Caryophyllaceae, Silene vulgaris f. humilis and Minuartia verna, apparently discard leaves when overloaded with heavy metals. All Central European metallophytes have close relatives that grow in areas outside of heavy metal soils, mainly in the Alps, and have, therefore, been considered as relicts of the glacial epoch in the past. However, the current

  11. Heavy oil in Saskatchewan: Building on strengths

    International Nuclear Information System (INIS)

    1994-02-01

    Saskatchewan has reserves of 17.6 billion bbl of heavy oil located in the west-central part of the province. The first oil well was drilled in 1945 and production of heavy oil has increased gradually, reaching 79,000 bbl/d in 1992. In recent years, the production pattern has not matched trends in investment; since 1982/83, the relative proportion of heavy oil drilling has declined significantly. A study is presented which analyzes trends in heavy oil investment, production, economics, and markets, with a focus on determining the causes for lack of investment in the heavy oil sector and evaluating the opportunities and constraints for long-term sustainability of this industry. Industry background is provided, with presentation of the key resource characteristics, reserve potential, and production and investment trends. Markets both in Canada and the USA are analyzed in detail, possible future trends are suggested. The effect of development of refinery capacity on heavy oil developments is examined. The logistics of shipping heavy oil to markets are detailed. The economics of Saskatchewan heavy oil production are established, taking into account all relevant cost components including taxes, royalties, and netbacks to producers. Issues of relevance affecting the heavy oil industry are discussed, including the need for environmental safeguards. 25 figs., 24 tabs

  12. Heavy water moderated tubular type nuclear reactor

    International Nuclear Information System (INIS)

    Oohashi, Masahisa.

    1986-01-01

    Purpose: To enable to effectively change the volume of heavy water per unit fuel lattice in heavy water moderated pressure tube type nuclear reactors. Constitution: In a nuclear reactor in which fuels are charged within pressure tubes and coolants are caused to flow between the pressure tubes and the fuels, heavy water tubes for recycling heavy water are disposed to a gas region formed to the outside of the pressure tubes. Then, the pressure tube diameter at the central portion of the reactor core is made smaller than that at the periphery of the reactor core. Further, injection means for gas such as helium is disposed to the upper portion for each of the heavy water tubes so that the level of the heavy water can easily be adjusted by the control for the gas pressure. Furthermore, heavy water reflection tubes are disposed around the reactor core. In this constitution, since the pitch for the pressure tubes can be increased, the construction and the maintenance for the nuclear reactor can be facilitated. Also, since the liquid surface of the heavy water in the heavy water tubes can be varied, nuclear properties is improved and the conversion ratio is improved. (Ikeda, J.)

  13. Dynamical limitations to heavy ion fusion

    International Nuclear Information System (INIS)

    Back, B.B.

    1983-01-01

    Dynamical limitations to heavy ion fusion reaction are considered. The experimental signatures and the importance of a quasi-fission process are examined. The anaular distributions of fission fragments for the 32 S+ 208 Pb and 16 O+ 238 U systems are presented. It is shown that the observations of quasi-fission for even rather ''light'' heavy ions poeess severe limitations on the fusion process. This result may consequently be responsible for the lack of success of the search for super heavy elements in heavy ion fusion reactions

  14. Poisoning of domestic animals with heavy metals

    Directory of Open Access Journals (Sweden)

    Velev Romel

    2009-01-01

    Full Text Available The term heavy metal refers to a metal that has a relatively high density and is toxic for animal and human organism at low concentrations. Heavy metals are natural components of the Earth's crust. They cannot be degraded or destroyed. To a small extent they enter animal organism via food, drinking water and air. Some heavy metals (e.g cooper, iron, chromium, zinc are essential in very low concentrations for the survival of all forms of life. These are described as essential trace elements. However, when they are present in greater quantities, like the heavy metals lead, cadmium and mercury which are already toxic in very low concentrations, they can cause metabolic anomalies or poisoning. Heavy metal poisoning of domestic animals could result, for instance, from drinking-water contamination, high ambient air concentrations near emission sources, or intake via the food chain. Heavy metals are dangerous because they tend to bioaccumulate in a biological organism over time. Manifestation of toxicity of individual heavy metals varies considerably, depending on dose and time of exposure, species, gender and environmental and nutritional factors. Large differences exist between the effects of a single exposure to a high concentration, and chronic exposures to lower doses. The aim of this work is to present the source of poisoning and toxicity of some heavy metals (lead, mercury, cadmium, thallium, arsenic, as well as new data about effects of those heavy metals on the health of domestic animals. .

  15. Manuscript Transcription by Crowdsourcing: Transcribe Bentham

    Directory of Open Access Journals (Sweden)

    Martin Moyle

    2011-02-01

    Full Text Available Transcribe Bentham is testing the feasibility of outsourcing the work of manuscript transcription to members of the public. UCL Library Services holds 60,000 folios of manuscripts of the philosopher and jurist Jeremy Bentham (1748–1832. Transcribe Bentham will digitise 12,500 Bentham folios, and, through a wiki-based interface, allow volunteer transcribers to take temporary ownership of manuscript images and to create TEI-encoded transcription text for final approval by UCL experts. Approved transcripts will be stored and preserved, with the manuscript images, in UCL’s public Digital Collections repository. The project makes innovative use of traditional library material. It will stimulate public engagement with UCL’s scholarly archive collections and the challenges of palaeography and manuscript transcription; it will raise the profile of the work and thought of Jeremy Bentham; and it will create new digital resources for future use by professional researchers. Towards the end of the project, the transcription tool will be made available to other projects and services. This paper is based on a presentation given by the lead author at LIBER’s 39th Annual General Conference in Aarhus, Denmark, 2010.

  16. A decade of heavy light

    International Nuclear Information System (INIS)

    Anon.

    1993-01-01

    Ten years ago, in May 1983, the UA1 experiment led by Carlo Rubbia at CERN's proton-antiproton collider saw the first Z particle, the heavy (91 GeV) electrically neutral carrier of the weak force. The press announced the discovery of 'heavy light', a highly apt description which has unfortunately fallen into disuse. The weak force comes in two varieties - one which permutes electric charges (the classic example being the beta decay of a neutron into a proton and an electron), and a neutral variant which does not. Each has its carrier particle, and both were discovered at CERN - first the charged W, in January 1983, and then the Z, a few months later. For both experiment and theory, the Z discovery was the culmination of a long and diligent quest without parallel in the history of modern physics. The missing piece of the 'electroweak' jigsaw finally clicked into place, and for ever after electromagnetism would be firmly linked with the weak nuclear force. It was the twentieth-century remake, with a much bigger cast, of the story which began in 1864 when James Clerk Maxwell wrote down his four famous equations linking electricity and magnetism. This was the birth of a new science - electromagnetism

  17. Heavy spin-2 Dark Matter

    Energy Technology Data Exchange (ETDEWEB)

    Babichev, Eugeny [Laboratoire de Physique Théorique, CNRS, Univ. Paris-Sud, Université Paris-Saclay,91405 Orsay (France); UPMC-CNRS, UMR7095, Institut d’Astrophysique de Paris, GReCO,98bis boulevard Arago, F-75014 Paris (France); Marzola, Luca; Raidal, Martti [National Institute of Chemical Physics and Biophysics,Rävala 10, 10143 Tallinn (Estonia); Laboratory of Theoretical Physics, Institute of Physics, University of Tartu,Ravila 14c, 50411 Tartu (Estonia); Schmidt-May, Angnis [Institut für Theoretische Physik, Eidgenössische Technische Hochschule Zürich,Wolfgang-Pauli-Strasse 27, 8093 Zürich (Switzerland); Urban, Federico; Veermäe, Hardi [National Institute of Chemical Physics and Biophysics,Rävala 10, 10143 Tallinn (Estonia); Strauss, Mikael von [UPMC-CNRS, UMR7095, Institut d’Astrophysique de Paris, GReCO,98bis boulevard Arago, F-75014 Paris (France)

    2016-09-12

    We provide further details on a recent proposal addressing the nature of the dark sectors in cosmology and demonstrate that all current observations related to Dark Matter can be explained by the presence of a heavy spin-2 particle. Massive spin-2 fields and their gravitational interactions are uniquely described by ghost-free bimetric theory, which is a minimal and natural extension of General Relativity. In this setup, the largeness of the physical Planck mass is naturally related to extremely weak couplings of the heavy spin-2 field to baryonic matter and therefore explains the absence of signals in experiments dedicated to Dark Matter searches. It also ensures the phenomenological viability of our model as we confirm by comparing it with cosmological and local tests of gravity. At the same time, the spin-2 field possesses standard gravitational interactions and it decays universally into all Standard Model fields but not into massless gravitons. Matching the measured DM abundance together with the requirement of stability constrains the spin-2 mass to be in the 1 to 100 TeV range.

  18. Radiobiology of heavy charged particles

    International Nuclear Information System (INIS)

    Kraft, G.

    1996-11-01

    The increase in the biological efficiency is the major motivation to use ions heavier than protons for therapy. Therefore, the detailed understanding of the radiobiological potential of heavy ions like carbon or oxygen is the basic condition of a proper application of these ions in therapy. But also for the lightest ion, the proton, evidence accumulates that changes in the radiobiological properties at the end of the particle range influence the therapeutic effect. Compared to sparsely ionizing radiation heavy charged particles exhibit a different physical interaction with the target material: The highly charged ions interact mostly via Coulomb forces with the electrons of the target material producing a track of ionizations and highly kinetic electrons along the path of the primary ion. In these tracks damage to the biological structures like the DNA occurs in a non stochastic, but spatially correlated way yielding a dramatic variation in the biological severity of the created damage. In cell-experiments the variation in the relative biological efficiency has been measured for many biological reactions like cell inactivation, chromosome aberrations and DNA damage. An overview on the inactivation data will be given and theoretical approaches will be discussed and compared to experimental data. (orig.)

  19. Heavy Ion Physics at CMS

    CERN Document Server

    Veres, Gabor

    2017-01-01

    In the present proceedings recent heavy ion results from the Compact Muon Solenoid collaboration at the LHC are presented. These contain comparisons between small and large collision systems, as well as studies of energy evolution, thus include data collected in proton-proton collisions at 13 TeV (2015 and 2016), proton-proton and lead-lead collisions at 5 TeV (2015), and proton-lead collisions at 5 TeV and 8 TeV (2016) center-of-mass energy per nucleon pair. They provide new insights into the properties of the extremely high density and high temperature matter created in heavy ion collisions, while pointing out similarities and differences in comparison to smaller collision systems. These include gluon distribution functions in the lead nucleus; the azimuthal anisotropy of final state particle distributions in all the three different collision systems; charge separation signals from proton-lead collisions and consequences for the Chiral Magnetic Effect; new studies of parton energy loss and its dependence on...

  20. The transcript release factor PTRF augments ribosomal gene transcription by facilitating reinitiation of RNA polymerase I

    Czech Academy of Sciences Publication Activity Database

    Jansa, Petr; Burek, C.; Sander, E. E.; Grummt, I.

    2001-01-01

    Roč. 29, č. 2 (2001), s. 423-429 ISSN 0305-1048 Institutional research plan: CEZ:AV0Z5052915 Keywords : rDNA transcription * PTRF * transcription reinitiation Subject RIV: EB - Genetics ; Molecular Biology Impact factor: 6.373, year: 2001

  1. Transcription-induced DNA supercoiling: New roles of intranucleosomal DNA loops in DNA repair and transcription.

    Science.gov (United States)

    Gerasimova, N S; Pestov, N A; Kulaeva, O I; Clark, D J; Studitsky, V M

    2016-05-26

    RNA polymerase II (Pol II) transcription through chromatin is accompanied by formation of small intranucleosomal DNA loops. Pol II captured within a small loop drives accumulation of DNA supercoiling, facilitating further transcription. DNA breaks relieve supercoiling and induce Pol II arrest, allowing detection of DNA damage hidden in chromatin structure.

  2. The Intertwined Roles of DNA Damage and Transcription

    OpenAIRE

    Di Palo, Giacomo

    2016-01-01

    DNA damage and transcription are two interconnected events. Transcription can induce damage and scheduled DNA damage can be required for transcription. Here, we analyzed genome-wide distribution of 8oxodG-marked oxidative DNA damage obtained by OxiDIP-Seq, and we found a correlation with transcription of protein coding genes.

  3. Battles and hijacks: Noncoding transcription in plants

    KAUST Repository

    Ariel, Federico

    2015-06-01

    Noncoding RNAs have emerged as major components of the eukaryotic transcriptome. Genome-wide analyses revealed the existence of thousands of long noncoding RNAs (lncRNAs) in several plant species. Plant lncRNAs are transcribed by the plant-specific RNA polymerases Pol IV and Pol V, leading to transcriptional gene silencing, as well as by Pol II. They are involved in a wide range of regulatory mechanisms impacting on gene expression, including chromatin remodeling, modulation of alternative splicing, fine-tuning of miRNA activity, and the control of mRNA translation or accumulation. Recently, dual noncoding transcription by alternative RNA polymerases was implicated in epigenetic and chromatin conformation dynamics. This review integrates the current knowledge on the regulatory mechanisms acting through plant noncoding transcription. © 2015 Elsevier Ltd.

  4. Phonemic Transcriptions in British and American Dictionaries

    Directory of Open Access Journals (Sweden)

    Rastislav Šuštaršič

    2005-06-01

    Full Text Available In view of recent criticisms concerning vowel symbols in some British English dictionaries (in particular by J. Windsor Lewis in JIPA (Windsor Lewis, 2003, with regard to the Oxford Dictionary of Pronunciation (Upton, 2001, this article extends the discussion on English phonemic transcriptions by including those that typically occur in standard American dictionaries, and by comparing the most common conventions of British and American dictionaries. In addition to symbols for both vowels and consonants, the paper also deals with the different representations of word accentuation and the issue of consistency regarding application of phonemic (systemic, broad, rather than phonetic (allophonic, narrow transcription. The different transcriptions are assessed from the points of view of their departures from the International Phonetic Alphabet, their overlapping with orthographic representation (spelling and their appropriateness in terms of reflecting actual pronunciation in standard British and/or American pronunciation.

  5. Crowdsourcing for quantifying transcripts: An exploratory study.

    Science.gov (United States)

    Azzam, Tarek; Harman, Elena

    2016-02-01

    This exploratory study attempts to demonstrate the potential utility of crowdsourcing as a supplemental technique for quantifying transcribed interviews. Crowdsourcing is the harnessing of the abilities of many people to complete a specific task or a set of tasks. In this study multiple samples of crowdsourced individuals were asked to rate and select supporting quotes from two different transcripts. The findings indicate that the different crowdsourced samples produced nearly identical ratings of the transcripts, and were able to consistently select the same supporting text from the transcripts. These findings suggest that crowdsourcing, with further development, can potentially be used as a mixed method tool to offer a supplemental perspective on transcribed interviews. Copyright © 2015 Elsevier Ltd. All rights reserved.

  6. Transcription regulatory networks analysis using CAGE

    KAUST Repository

    Tegnér, Jesper N.

    2009-10-01

    Mapping out cellular networks in general and transcriptional networks in particular has proved to be a bottle-neck hampering our understanding of biological processes. Integrative approaches fusing computational and experimental technologies for decoding transcriptional networks at a high level of resolution is therefore of uttermost importance. Yet, this is challenging since the control of gene expression in eukaryotes is a complex multi-level process influenced by several epigenetic factors and the fine interplay between regulatory proteins and the promoter structure governing the combinatorial regulation of gene expression. In this chapter we review how the CAGE data can be integrated with other measurements such as expression, physical interactions and computational prediction of regulatory motifs, which together can provide a genome-wide picture of eukaryotic transcriptional regulatory networks at a new level of resolution. © 2010 by Pan Stanford Publishing Pte. Ltd. All rights reserved.

  7. Runx transcription factors in neuronal development

    Directory of Open Access Journals (Sweden)

    Shiga Takashi

    2008-08-01

    Full Text Available Abstract Runt-related (Runx transcription factors control diverse aspects of embryonic development and are responsible for the pathogenesis of many human diseases. In recent years, the functions of this transcription factor family in the nervous system have just begun to be understood. In dorsal root ganglion neurons, Runx1 and Runx3 play pivotal roles in the development of nociceptive and proprioceptive sensory neurons, respectively. Runx appears to control the transcriptional regulation of neurotrophin receptors, numerous ion channels and neuropeptides. As a consequence, Runx contributes to diverse aspects of the sensory system in higher vertebrates. In this review, we summarize recent progress in determining the role of Runx in neuronal development.

  8. Transcriptional inhibition by the retinoblastoma protein

    DEFF Research Database (Denmark)

    Fattaey, A; Helin, K; Harlow, E

    1993-01-01

    The retinoblastoma protein, pRB, appears to play a key role in coordinating the regulation of cell cycle position and transcriptional events. pRB undergoes specific cell-cycle-dependent phosphorylation, being underphosphorylated in G1 and heavily phosphorylated in S, G2, and M. The underphosphory......The retinoblastoma protein, pRB, appears to play a key role in coordinating the regulation of cell cycle position and transcriptional events. pRB undergoes specific cell-cycle-dependent phosphorylation, being underphosphorylated in G1 and heavily phosphorylated in S, G2, and M......-mediated transcription would be lost by mutation in the retinoblastoma gene in human tumours, by pRB's interaction with DNA tumour virus oncoproteins, or by phosphorylation during the cell cycle....

  9. Deciphering the Innate Lymphoid Cell Transcriptional Program

    Directory of Open Access Journals (Sweden)

    Cyril Seillet

    2016-10-01

    Full Text Available Innate lymphoid cells (ILCs are enriched at mucosal surfaces, where they provide immune surveillance. All ILC subsets develop from a common progenitor that gives rise to pre-committed progenitors for each of the ILC lineages. Currently, the temporal control of gene expression that guides the emergence of these progenitors is poorly understood. We used global transcriptional mapping to analyze gene expression in different ILC progenitors. We identified PD-1 to be specifically expressed in PLZF+ ILCp and revealed that the timing and order of expression of the transcription factors NFIL3, ID2, and TCF-1 was critical. Importantly, induction of ILC lineage commitment required only transient expression of NFIL3 prior to ID2 and TCF-1 expression. These findings highlight the importance of the temporal program that permits commitment of progenitors to the ILC lineage, and they expand our understanding of the core transcriptional program by identifying potential regulators of ILC development.

  10. Transcription as a Threat to Genome Integrity.

    Science.gov (United States)

    Gaillard, Hélène; Aguilera, Andrés

    2016-06-02

    Genomes undergo different types of sporadic alterations, including DNA damage, point mutations, and genome rearrangements, that constitute the basis for evolution. However, these changes may occur at high levels as a result of cell pathology and trigger genome instability, a hallmark of cancer and a number of genetic diseases. In the last two decades, evidence has accumulated that transcription constitutes an important natural source of DNA metabolic errors that can compromise the integrity of the genome. Transcription can create the conditions for high levels of mutations and recombination by its ability to open the DNA structure and remodel chromatin, making it more accessible to DNA insulting agents, and by its ability to become a barrier to DNA replication. Here we review the molecular basis of such events from a mechanistic perspective with particular emphasis on the role of transcription as a genome instability determinant.

  11. Molecular imaging of transcriptional regulation during inflammation

    Directory of Open Access Journals (Sweden)

    Carlsen Harald

    2010-04-01

    Full Text Available Abstract Molecular imaging enables non-invasive visualization of the dynamics of molecular processes within living organisms in vivo. Different imaging modalities as MRI, SPECT, PET and optic imaging are used together with molecular probes specific for the biological process of interest. Molecular imaging of transcription factor activity is done in animal models and mostly in transgenic reporter mice, where the transgene essentially consists of a promoter that regulates a reporter gene. During inflammation, the transcription factor NF-κB is widely involved in orchestration and regulation of the immune system and almost all imaging studies in this field has revolved around the role and regulation of NF-κB. We here present a brief introduction to experimental use and design of transgenic reporter mice and a more extensive review of the various studies where molecular imaging of transcriptional regulation has been applied during inflammation.

  12. Method of controlling power of a heavy water reactor

    International Nuclear Information System (INIS)

    Masuda, Hiroyuki.

    1975-01-01

    Object: To adjust a level of heavy water in a region of reflection body to control power in a heavy water reactor. Structure: The interior of a core tank filled with heavy water is divided by a partition into a core heavy water region and a reflection body region formed by surrounding the core heavy water region, and a level of heavy water within the reflection body region is adjusted to control power. Preferably, it is desirable to communicate the core heavy water region with the reflection body heavy water region at their lower portion, and gas pressure applied to an upper portion within at least one of said regions is adjusted to adjust the level of heavy water within the reflection body heavy water region. Thereby, the heavy water within the reflection body heavy water region may be introduced into the core region, thus requiring no tank which stores heavy water within the reflection body region. (Kamimura, M.)

  13. Widespread anti-sense transcription in apple is correlated with siRNA production and indicates a large potential for transcriptional and/or post-transcriptional control.

    Science.gov (United States)

    Celton, Jean-Marc; Gaillard, Sylvain; Bruneau, Maryline; Pelletier, Sandra; Aubourg, Sébastien; Martin-Magniette, Marie-Laure; Navarro, Lionel; Laurens, François; Renou, Jean-Pierre

    2014-07-01

    Characterizing the transcriptome of eukaryotic organisms is essential for studying gene regulation and its impact on phenotype. The realization that anti-sense (AS) and noncoding RNA transcription is pervasive in many genomes has emphasized our limited understanding of gene transcription and post-transcriptional regulation. Numerous mechanisms including convergent transcription, anti-correlated expression of sense and AS transcripts, and RNAi remain ill-defined. Here, we have combined microarray analysis and high-throughput sequencing of small RNAs (sRNAs) to unravel the complexity of transcriptional and potential post-transcriptional regulation in eight organs of apple (Malus × domestica). The percentage of AS transcript expression is higher than that identified in annual plants such as rice and Arabidopsis thaliana. Furthermore, we show that a majority of AS transcripts are transcribed beyond 3'UTR regions, and may cover a significant portion of the predicted sense transcripts. Finally we demonstrate at a genome-wide scale that anti-sense transcript expression is correlated with the presence of both short (21-23 nt) and long (> 30 nt) siRNAs, and that the sRNA coverage depth varies with the level of AS transcript expression. Our study provides a new insight on the functional role of anti-sense transcripts at the genome-wide level, and a new basis for the understanding of sRNA biogenesis in plants. © 2014 INRA. New Phytologist © 2014 New Phytologist Trust.

  14. International Conference on Heavy Vehicles HVParis 2008 : Heavy Vehicle Transport Technology (HVTT 10)

    OpenAIRE

    JACOB, Bernard; NORDENGEN, Paul; O'CONNOR, Alan; BOUTELDJA, Mohamed

    2008-01-01

    Sommaire : Heavy vehicles and WIM technology, testing and standards. Interactions between heavy vehicles or trains and the infrastructure, environment and other system users. Heavy vehicle and road management information: measurements, data quality, data management. Freight mobility and safety. Vehicle classification, size and weight evaluation, regulations and enforcement. Traffic and road safety. WIM of road vehicles, trains and aeroplanes.

  15. Harnessing transcription for bioproduction in cyanobacteria

    DEFF Research Database (Denmark)

    Stensjö, Karin; Vavitsas, Konstantinos; Tyystjärvi, Taina

    2018-01-01

    Sustainable production of biofuels and other valuable compounds is one of our future challenges. One tempting possibility is to use photosynthetic cyanobacteria as production factories. Currently, tools for genetic engineering of cyanobacteria are yet not good enough to exploit the full potential...... of cyanobacteria. A wide variety of expression systems will be required to adjust both the expression of heterologous enzyme(s) and metabolic routes to the best possible balance, allowing the optimal production of a particular substance. In bacteria, transcription, especially the initiation of transcription, has...

  16. Transcription and the aspect ratio of DNA

    DEFF Research Database (Denmark)

    Olsen, Kasper Wibeck; Bohr, Jakob

    2013-01-01

    analysis of transcription. It is shown that under certain reasonable assumptions transcription is only possible if the aspect ratio is in the regime corresponding to further twisting. We find this constraint to be in agreement with long-established crystallographic studies of DNA.......Two separate regimes exist for the aspect ratio of DNA. A low aspect regime where DNA will twist further under strain and a high aspect regime where DNA will untwist under strain. The question of the overall geometry, i.e. the aspect ratio, of DNA is revisited from the perspective of a geometrical...

  17. Status and prospects for lattice calculations in heavy quark physics

    International Nuclear Information System (INIS)

    Wittig, H.; Forschungszentrum Juelich GmbH

    1996-06-01

    The current status of lattice calculation of weak matrix elements for heavy quark systems is reviewed. After an assessment of systematic errors in present simulations, results for the B meson decay constant, the B parameter B B and semi-leptonic heavy-to-light and heavy-to-heavy transitions are discussed. The final topic are lattice results for heavy baryon spectroscopy. (orig.)

  18. Acute effects of heavy metals on the expression of glutathione-related antioxidant genes in the marine ciliate Euplotes crassus

    International Nuclear Information System (INIS)

    Kim, Se-Hun; Kim, Se-Joo; Lee, Jae-Seong; Lee, Young-Mi

    2014-01-01

    Highlights: • Significant higher increases in the relative ROS and total GSH levels were observed after exposure to heavy metals. • Real-time PCR data showed expression levels of GPx and GR mRNA were sensitively modulated within 8 h of exposure to heavy metals. • E. crassus GPx and GR genes may be involved in cellular defense mechanisms against heavy metal-induced oxidative stress. • E. crassus GPx and GR genes will be useful as potential molecular markers for monitoring heavy metal contamination. - Abstract: Euplotes crassus, a single-celled eukaryote, is directly affected by environmental contaminants. Here, exponentially cultured E. crassus were exposed to cadmium, copper, lead, and zinc and then the reactive oxygen species (ROS) and total glutathione (GSH) levels were measured. Subsequently, the transcriptional modulation of glutathione peroxidase (GPx) and glutathione reductase (GR) were estimated by quantitative RT-PCR. After an 8-h exposure, significantly higher increases in the relative ROS and total GSH levels were observed in exposed group, compared to the controls. Real-time PCR data revealed that the expression levels of GPx and GR mRNA were sensitively modulated within 8 h of exposure to all heavy metals. These findings suggest that these genes may be involved in cellular defense mechanisms by modulating their gene expression against heavy metal-induced oxidative stress. Thus, they may be useful as potential molecular biomarkers to assess sediment environments for contaminants

  19. Nuclear research with heavy ions

    International Nuclear Information System (INIS)

    Kaplan, M.

    1991-08-01

    This report discusses the following topics: Asymmetric fission of 149 Tb* from the finite-range, rotating-liquid-drop model: mean total kinetic energies for binary fragmentation; charged-particle evaporation from hot composite nuclei: evidence over a broad Z range for distortions from cold nuclear profiles; the role of reversed kinematics and double kinematic solutions in nuclear reactions studies; production of intermediate-mass-fragments in the reaction 98 Mo + 51 V at an excitation energy E* = 224-MeV; emission of light charged particles in the reaction 344-MeV 28 Si + 121 Sb; continued developments of the statistical evaporation code LILITA N90; and planning for heavy-ion-collision studies at very high energies: the STAR collaboration at RHIC

  20. QCD in heavy ion collisions

    Energy Technology Data Exchange (ETDEWEB)

    Iancu, Edmond [IPhT, Saclay (France)

    2014-07-01

    These lectures provide a modern introduction to selected topics in the physics of ultrarelativistic heavy ion collisions which shed light on the fundamental theory of strong interactions, the Quantum Chromodynamics. The emphasis is on the partonic forms of QCD matter which exist in the early and intermediate stages of a collision -- the colour glass condensate, the glasma, and the quark-gluon plasma -- and on the effective theories that are used for their description. These theories provide qualitative and even quantitative insight into a wealth of remarkable phenomena observed in nucleus-nucleus or deuteron-nucleus collisions at RHIC and/or the LHC, like the suppression of particle production and of azimuthal correlations at forward rapidities, the energy and centrality dependence of the multiplicities, the ridge effect, the limiting fragmentation, the jet quenching, or the dijet asymmetry.

  1. QCD in heavy ion collisions

    International Nuclear Information System (INIS)

    Iancu, Edmond

    2014-01-01

    These lectures provide a modern introduction to selected topics in the physics of ultrarelativistic heavy ion collisions which shed light on the fundamental theory of strong interactions, the Quantum Chromodynamics. The emphasis is on the partonic forms of QCD matter which exist in the early and intermediate stages of a collision -- the colour glass condensate, the glasma, and the quark-gluon plasma -- and on the effective theories that are used for their description. These theories provide qualitative and even quantitative insight into a wealth of remarkable phenomena observed in nucleus-nucleus or deuteron-nucleus collisions at RHIC and/or the LHC, like the suppression of particle production and of azimuthal correlations at forward rapidities, the energy and centrality dependence of the multiplicities, the ridge effect, the limiting fragmentation, the jet quenching, or the dijet asymmetry

  2. Jets in heavy ion collisions

    International Nuclear Information System (INIS)

    Nattrass, Christine

    2017-01-01

    High energy collisions of heavy nuclei permit the study of nuclear matter at temperatures and energy densities so high that the fundamental theory for strong interactions, QCD, predicts a phase transition to a plasma of quarks and gluons. This matter, called a Quark Gluon Plasma (QGP), has been studied experimentally for the last decade and has been observed to be a strongly interacting liquid with a low viscosity. High energy partons created early in the collision interact with the QGP and provide unique probes of its properties. Hard partons fragment into collimated sprays of particles called jets and have been studied through measurements of single particles, correlations between particles, and measurements of fully reconstructed jets. These measurements demonstrate partonic energy loss in the QGP and constrain the QGP’s properties. Measurements of the jet structure give insight into the mechanism of this energy loss. The information we have learned from studies of jets and challenges for the field will be reviewed. (paper)

  3. Heavy Higgs searches. Flavour matters

    International Nuclear Information System (INIS)

    Gori, Stefania; Paul, Ayan

    2017-10-01

    We point out that the stringent lower bounds on the masses of additional electrically neutral and charged Higgs bosons crucially depend on the flavour structure of their Yukawa interactions. We show that these bounds can easily be evaded by the introduction of flavour-changing neutral currents in the Higgs sector. As an illustration, we study the phenomenology of a two Higgs doublet model with a Yukawa texture singling out the third family of quarks and leptons. We combine constraints from low-energy flavour physics measurements, LHC measurements of the 125 GeV Higgs boson rates, and LHC searches for new heavy Higgs bosons. We propose novel LHC searches that could be performed in the coming years to unravel the existence of these new Higgs bosons.

  4. Heavy quark physics from SLD

    Energy Technology Data Exchange (ETDEWEB)

    Messner, R. [Stanford Univ., CA (United States)

    1997-01-01

    This report covers preliminary measurements from SLD on heavy quark production at the Z{sup 0}, using 150,000 hadronic Z{sup 0} decays accumulated during the 1993-1995 runs. A measurement of R{sub b} with a lifetime double tag is presented. The high electron beam polarization of the SLC is employed in the direct measurement of the parity-violating parameters A{sub b} and A{sub c} by use of the left-right forward-backward asymmetry. The lifetimes of B{sup +} and B{sup 0} mesons have been measured by two analyses. The first identifies semileptonic decays of B mesons with high (p,p{sub t}) leptons; the second analysis isolates a sample of B meson decays with a two-dimensional impact parameter tag and reconstructs the decay length and charge using a topological vertex reconstruction method.

  5. Heavy quark physics from SLD

    International Nuclear Information System (INIS)

    Messner, R.

    1997-01-01

    This report covers preliminary measurements from SLD on heavy quark production at the Z 0 , using 150,000 hadronic Z 0 decays accumulated during the 1993-1995 runs. A measurement of R b with a lifetime double tag is presented. The high electron beam polarization of the SLC is employed in the direct measurement of the parity-violating parameters A b and A c by use of the left-right forward-backward asymmetry. The lifetimes of B + and B 0 mesons have been measured by two analyses. The first identifies semileptonic decays of B mesons with high (p,p t ) leptons; the second analysis isolates a sample of B meson decays with a two-dimensional impact parameter tag and reconstructs the decay length and charge using a topological vertex reconstruction method

  6. Heavy Higgs searches. Flavour matters

    Energy Technology Data Exchange (ETDEWEB)

    Gori, Stefania [Cincinnati Univ., OH (United States). Dept. of Physics; Grojean, Christophe [Deutsches Elektronen-Synchrotron (DESY), Hamburg (Germany); Humboldt-Universitaet, Berlin (Germany). Inst. fuer Physik; Juste, Aurelio [Institut de Fisica d' Altes Energies (IFAE), Barcelona (Spain); Institucio Catalanade Recerca i Estudis Avancats (ICREA), Barcelona (Spain); Paul, Ayan [INFN, Sezione di Roma (Italy)

    2017-10-15

    We point out that the stringent lower bounds on the masses of additional electrically neutral and charged Higgs bosons crucially depend on the flavour structure of their Yukawa interactions. We show that these bounds can easily be evaded by the introduction of flavour-changing neutral currents in the Higgs sector. As an illustration, we study the phenomenology of a two Higgs doublet model with a Yukawa texture singling out the third family of quarks and leptons. We combine constraints from low-energy flavour physics measurements, LHC measurements of the 125 GeV Higgs boson rates, and LHC searches for new heavy Higgs bosons. We propose novel LHC searches that could be performed in the coming years to unravel the existence of these new Higgs bosons.

  7. Heavy quark hadron mass scale

    International Nuclear Information System (INIS)

    Anderson, J.T.

    1994-01-01

    Without the spin interactions the hardron masses within a multiplet are degenerate. The light quark hadron degenerate mulitplet mass spectrum is extended from the 3 quark ground state multiplets at J P =0 - , 1/2 + , 1 - to include the excited states which follow the spinorial decomposition of SU(2)xSU(2). The mass scales for the 4, 5, 6, .. quark hadrons are obtained from the degenerate multiplet mass m 0 /M=n 2 /α with n=4, 5, 6, .. The 4, 5, 6, .. quark hadron degenerate multiplet masses follow by splitting of the heavy quark mass scales according to the spinorial decomposition of SU(2)xSU(2). (orig.)

  8. Heavy Duty Vehicle Futures Analysis.

    Energy Technology Data Exchange (ETDEWEB)

    Askin, Amanda Christine; Barter, Garrett.; West, Todd H.; Manley, Dawn Kataoka

    2014-05-01

    This report describes work performed for an Early Career Research and Development project. This project developed a heavy-duty vehicle (HDV) sector model to assess the factors influencing alternative fuel and efficiency technology adoption. This model builds on a Sandia light duty vehicle sector model and provides a platform for assessing potential impacts of technological advancements developed at the Combustion Research Facility. Alternative fuel and technology adoption modeling is typically developed around a small set of scenarios. This HDV sector model segments the HDV sector and parameterizes input values, such as fuel prices, efficiencies, and vehicle costs. This parameterization enables sensitivity and trade space analyses to identify the inputs that are most associated with outputs of interest, such as diesel consumption and greenhouse gas emissions. Thus this analysis tool enables identification of the most significant HDV sector drivers that can be used to support energy security and climate change goals.

  9. Heavy ion physics at CERN

    International Nuclear Information System (INIS)

    Vesztergombi, G.

    1991-01-01

    A summary of the present status and future plans for heavy ion experiments at CERN-SPS and CERN-LHC accelerators is given. The planned three phases give possibilities to study the properties of the quark-gluon-plasma (QGP). At the present stage the feasibility of high energy ion-ion experiments with their very abundant secondary hadron production, shows that there is a chance to obtain high densities, and to look for the onset of new, collective phenomena. In a second phase, there should be a chance to obtain more conclusive evidence for the onset of quark deconfinement. In the third stage, the average energy densities rise above the deconfinement threshold, so that a study of the properties of QGP should become possible. (G.P.)

  10. Progress in Heavy Ion Fusion

    International Nuclear Information System (INIS)

    Herrmannsfeldt, W.B.

    1988-09-01

    The progress of the field of Heavy Ion Fusion has been documented in the proceedings of the series of International Symposia that, in recent years, have occurred every second year. The latest of these conferences was hosted by Gesellshaft fuer Schwerionenforshung (GSI) in Darmstadt, West Germany, June 28-30, 1988. For this report, a few highlights from the conference are selected, stressing experimental progress and prospects for future advances. A little extra time is devoted to report on the developments at the Lawrence Berkeley Laboratory (LBL) which is the center for most of the HIFAR program. The Director of the HIFAR program at LBL is Denis Keefe, who presented the HIF report at the last two of the meetings in this series, and in whose place the author is appearing now. 4 refs., 1 fig

  11. Process to hydroform heavy petroleum

    Energy Technology Data Exchange (ETDEWEB)

    Sinfelt, J.H.; Barnett, A.E.

    1977-02-17

    The invention concerns the hydroforming of heavy petrol. A particularly high degree of conversion of paraffins into aromatic substances is achieved. This leads to a a considerable increase of the octane number above 100. The hydroforming takes place by contacting the initial product with a catalyst in the presence of hydrogen. The temperature here is 427/sup 0/ to 566/sup 0/C. A mixture of 0.05-2 wt.% iridium, 0.5-2 wt.% gold, silver and copper serves as catalyst. It is coated on an oxidic carrier with a large surface, e.g. aluminium oxide with a surface of 50-300 m/sup 2//g. The larger the surface, the greater the reaction rate. The iridium acts as active catalyst, gold reduces the cracking activity of the catalyst and improves the product yield in the boiling range of benzine.

  12. Heavy Vehicle Technologies Program Retrospective and Outlook

    International Nuclear Information System (INIS)

    James J. Eberhardt

    1999-01-01

    OHVT Mission is to conduct, in collaboration with our heavy vehicle industry partners and their suppliers, a customer-focused national program to research and develop technologies that will enable trucks and other heavy vehicles to be more energy efficient and able to use alternative fuels while simultaneously reducing emissions

  13. Heavy quark correlations in hadronic collisions

    International Nuclear Information System (INIS)

    Mangano, M.L.; Ridolfi, G.

    1992-01-01

    The study of heavy quark production at hadron colliders will provide important tests and measurements within and possibly beyond the Standard Model. The results of a recent calculation of heavy quark hadronic production correlation properties at the full next-to-leading order (NLO) in perturbative QCD are presented. These properties are important for several applications. (R.P.) 8 refs.; 3 figs

  14. Review of heavy ion reaction mechanisms

    International Nuclear Information System (INIS)

    Ngo, C.

    1986-04-01

    We review some of the many aspects of heavy-ion reaction mechanisms observed at bombarding energies smaller than approximately 50 MeV/u that is to say in what is called the low bombarding energy domain and the intermediate bombarding energy domain. We emphasize the results concerning the use of very heavy projectiles which has led to the observation of new mechanisms

  15. Heavy Flavor Fragmentation and Decay at SLD

    Energy Technology Data Exchange (ETDEWEB)

    Plano, Richard M

    1999-02-24

    Results on heavy quark fragmentation obtained using the SLD detector at the SLAC Linear Collider are presented. This talk will cover the ratio of vector to pseudoscalar charmed meson production, the inclusive B hadron energy distribution, the inclusive particle production in heavy jets compared to their production in light jets, and charged and neutral B meson lifetimes.

  16. Relativistic heavy ion research at Berkeley

    International Nuclear Information System (INIS)

    Anon.

    1981-01-01

    The project of a superconducting synchrotron for heavy ions with 1 TeV/amu is described. In this connection the physics is discussed which can be studied by this accelerator. Furthermore, the HISS-heavy ion spectrometer system and the Plastic Ball detector are described. (HSI).

  17. Octupole correlations in the heavy elements

    International Nuclear Information System (INIS)

    Chasman, R.R.

    1986-01-01

    The effects of octupole correlations on the nuclear structure of the heavy elements are discussed. The cluster model description of the heavy elements is analyzed. The relevance of 2 6 -pole deformation and fast El transitions to an octupole model is considered. 30 refs., 21 figs., 1 tab

  18. Former heavy drinkers’ multiple narratives of recovery

    Directory of Open Access Journals (Sweden)

    Christensen Anne-Sofie

    2015-06-01

    Full Text Available AIM – This article explores the multiplicity of former heavy drinkers’ narratives. The focus lies on turning points from heavy drinking among people who have recovered through self-change and among those who recovered by participating in Alcoholics Anonymous (AA meetings.

  19. Physics with heavy ions at LHC

    International Nuclear Information System (INIS)

    Safarik, K.

    2004-01-01

    We discuss the motivation to study heavy ion collisions at LHC, and the experimental conditions under which detectors will have to operate. A short description of the detectors under construction is given. Physics performance is illustrated in two examples, which will become accessible at LHC energies, jet quenching and heavy-flavor production. (author)

  20. Heavy metals in packaging : a literature survey

    NARCIS (Netherlands)

    van Putten EM; IMG

    2011-01-01

    The use of the heavy metals cadmium, mercury, chromium and lead in packaging is forbidden internationally for some years because these substances are harmful to the environment. In 2002 the Dutch national Inspectorate for the Environment determined the presence of heavy metals in packaging for

  1. Heavy work investment, personality and organizational climate

    NARCIS (Netherlands)

    Schaufeli, Wilmar B.

    2016-01-01

    Purpose – The purpose of this paper is to assess the relative importance of personality and organizational climate for two forms of heavy work investment; workaholism, a “bad” and work engagement, which represents a “good” kind of heavy work investment. More specifically, it is hypothesized that

  2. Heavy water lattices: Second panel report

    Energy Technology Data Exchange (ETDEWEB)

    1963-09-15

    The panel was attended by prominent physicists from most of the laboratories engaged in the field of heavy water lattices throughout the world. The participants presented written contributions and status reports describing the past history and plans for further development of heavy-water reactors. Valuable discussions took place, during which recommendations for future work were formulated. Refs, figs, tabs.

  3. Heavy water lattices: Second panel report

    International Nuclear Information System (INIS)

    1963-01-01

    The panel was attended by prominent physicists from most of the laboratories engaged in the field of heavy water lattices throughout the world. The participants presented written contributions and status reports describing the past history and plans for further development of heavy-water reactors. Valuable discussions took place, during which recommendations for future work were formulated. Refs, figs, tabs

  4. Clinical results in heavy particle radiotherapy

    International Nuclear Information System (INIS)

    Castro, J.R.; Quivey, J.M.; Saunders, W.M.; Woodruff, K.H.; Chen, G.T.Y.; Lyman, J.T.; Pitluck, S.; Tobias, C.A.; Walton, R.E.; Peters, T.C.

    1980-01-01

    The chapter presents an overview of the use of heavy particles in human cancer radiotherapy. The biophysical characteristics and rationale for using heavy charged particle therapy are explored. The clinical experience with carbon, neon, argon and helium are summarized for various types of tumors including carcinomas of the uterine cervix and lung, skin melanomas and metastatic sarcomas. No obvious normal tissue complications have appeared

  5. Highlights of the heavy ion fusion symposium

    International Nuclear Information System (INIS)

    Keefe, D.

    1986-01-01

    The current status and prospects for inertial confinement fusion based on the use of intense beams of heavy ions will be described in the light of results presented at the International Symposium on Heavy Ion Fusion, (Washington, DC, May 27-29, 1986)

  6. Highlights of the heavy ion fusion symposium

    International Nuclear Information System (INIS)

    Keefe, D.

    1986-07-01

    The current status and prospects for inertial confinement fusion based on the use of intense beams of heavy ions will be described in the light of results presented at the International Symposium on Heavy Ion Fusion, (Washington, DC, May 27-29, 1986)

  7. Detector issues for relativistic heavy ion experimentation

    International Nuclear Information System (INIS)

    Gordon, H.

    1986-04-01

    Several aspects of experiments using relativistic heavy ion beams are discussed. The problems that the current generation of light ion experiments would face in using gold beams are noted. A brief review of colliding beam experiments for heavy ion beams is contrasted with requirements for SSC detectors. 11 refs., 13 figs

  8. Heavy fuel and LPG; Fioul et GPL

    Energy Technology Data Exchange (ETDEWEB)

    Philippon, A. [Chambre Syndicale du raffinage, UFIP, 75 - Paris (France)

    1997-12-31

    This paper analyzes the impact of new French combustion and environment regulations on the market of heavy fuels and on refining. The economical context of the petroleum and heavy fuels market is recalled first and then the future evolution of this market and the future impact of new pollution regulations on the refining industry are briefly analyzed. (J.S.)

  9. ASSESSMENT OF HEAVY METALS AND CRUDE PROTEIN ...

    African Journals Online (AJOL)

    UNICORN

    to quantify heavy metals (Cu, Zn, Pb and Cd) and crude protein content of these species that are sold in ... in protein, omega 3 and low fat content. Furthermore ... high levels of cadmium can cause kidney and liver damage in man [6]. Motivation .... analysis. Determination of heavy metals in the edible tissues of the organisms.

  10. The Canadian heavy water supply program

    International Nuclear Information System (INIS)

    Dahlinger, A.; McNally, P.J.

    1976-06-01

    The performance to date of individual Canadian heavy water plants is described in detail as are the current plant construction plans. These data, when related to the long-term electricity demand indicate that heavy water supply and demand are in reasonable balance and that the CANDU program will not be inhibited because of shortages of the commodity. (author)

  11. A Heavy Flavor Tracker for STAR

    Energy Technology Data Exchange (ETDEWEB)

    Xu, Z.; Chen, Y.; Kleinfelder, S.; Koohi, A.; Li, S.; Huang, H.; Tai, A.; Kushpil, V.; Sumbera, M.; Colledani, C.; Dulinski, W.; Himmi,A.; Hu, C.; Shabetai, A.; Szelezniak, M.; Valin, I.; Winter, M.; Miller,M.; Surrow, B.; Van Nieuwenhuizen G.; Bieser, F.; Gareus, R.; Greiner,L.; Lesser, F.; Matis, H.S.; Oldenburg, M.; Ritter, H.G.; Pierpoint, L.; Retiere, F.; Rose, A.; Schweda, K.; Sichtermann, E.; Thomas, J.H.; Wieman, H.; Yamamoto, E.; Kotov, I.

    2005-03-14

    We propose to construct a Heavy Flavor Tracker (HFT) for theSTAR experiment at RHIC. The HFT will bring new physics capabilities toSTAR and it will significantly enhance the physics capabilities of theSTAR detector at central rapidities. The HFT will ensure that STAR willbe able to take heavy flavor data at all luminosities attainablethroughout the proposed RHIC II era.

  12. A Heavy Flavor Tracker for STAR

    Energy Technology Data Exchange (ETDEWEB)

    Xu, Z.; Chen, Y.; Kleinfelder, S.; Koohi, A.; Li, S.; Huang, H.; Tai, A.; Kushpil, V.; Sumbera, M.; Colledani, C.; Dulinski, W.; Himmi,A.; Hu, C.; Shabetai, A.; Szelezniak, M.; Valin, I.; Winter, M.; Surrow,B.; Van Nieuwenhuizen, G.; Bieser, F.; Gareus, R.; Greiner, L.; Lesser,F.; Matis, H.S.; Oldenburg, M.; Ritter, H.G.; Pierpoint, L.; Retiere, F.; Rose, A.; Schweda, K.; Sichtermann, E.; Thomas, J.H.; Wieman, H.; Yamamoto, E.; Kotov, I.

    2005-03-14

    We propose to construct a Heavy Flavor Tracker (HFT) for the STAR experiment at RHIC. The HFT will bring new physics capabilities to STAR and it will significantly enhance the physics capabilities of the STAR detector at central rapidities. The HFT will ensure that STAR will be able to take heavy flavor data at all luminosities attainable throughout the proposed RHIC II era.

  13. Heavy ion reactions at high energies

    International Nuclear Information System (INIS)

    Jakobsson, Bo.

    1977-01-01

    A review on heavy ion experiments at energies >0.1GeV/nucleon is presented. Reaction cross-sections, isotope production cross-sections and pion production in nucleus-nucleus collisions are discussed. Some recent models for heavy ion reactions like the abrasion-ablation model, the fireball model and the different shock-wave models are also presented

  14. 7th high energy heavy ion study

    International Nuclear Information System (INIS)

    Bock, R.; Gutbrod, H.H.; Stock, R.

    1985-03-01

    These proceedings contain the articles presented at the named conference. They deal with relativistic heavy ion reactions, the expansion and freeze-out of nuclear matter, anomalon experiments, and multifragmentation and particle correlations in heavy ion reactions. See hints under the relevant topics. (HSI)

  15. Microbial treatment of heavy metal leachates

    International Nuclear Information System (INIS)

    Alvarez Aliaga, M. T.

    2009-01-01

    Ore-mining metallurgy and other industrial activities represent the source of heavy metal and radionuclide contamination in terrestrial and aquatic environments. Physico-chemical processes are employed for heavy metal removal from industrial wastewaters. However, limitations due to the cost-effectiveness and use of contaminating reagents make these processes not environmentally friendly. (Author)

  16. Heavy-Duty Diesel Fuel Analysis

    Science.gov (United States)

    EPA's heavy-duty diesel fuel analysis program sought to quantify the hydrocarbon, NOx, and PM emission effects of diesel fuel parameters (such as cetane number, aromatics content, and fuel density) on various nonroad and highway heavy-duty diesel engines.

  17. Heavy truck rollover characterization (phase B).

    Science.gov (United States)

    2009-09-01

    The Heavy Truck Rollover Characterization Study - Phase-B builds on the results of prior phases of research. Phases 1 and 2 (Funded by Federal Highway Administration) involved heavy truck rollover characterization for a tractor and box-trailer; and P...

  18. A Heavy Flavor Tracker for STAR

    International Nuclear Information System (INIS)

    Xu, Z.; Chen, Y.; Kleinfelder, S.; Koohi, A.; Li, S.; Huang, H.; Tai, A.; Kushpil, V.; Sumbera, M.; Colledani, C.; Dulinski, W.; Himmi, A.; Hu, C.; Shabetai, A.; Szelezniak, M.; Valin, I.; Winter, M.; Surrow, B.; Van Nieuwenhuizen, G.; Bieser, F.; Gareus, R.; Greiner, L.; Lesser, F.; Matis, H.S.; Oldenburg, M.; Ritter, H.G.; Pierpoint, L.; Retiere, F.; Rose, A.; Schweda, K.; Sichtermann, E.; Thomas, J.H.; Wieman, H.; Yamamoto, E.; Kotov, I.

    2005-01-01

    We propose to construct a Heavy Flavor Tracker (HFT) for the STAR experiment at RHIC. The HFT will bring new physics capabilities to STAR and it will significantly enhance the physics capabilities of the STAR detector at central rapidities. The HFT will ensure that STAR will be able to take heavy flavor data at all luminosities attainable throughout the proposed RHIC II era

  19. Behaviour of heavy metals in soils

    NARCIS (Netherlands)

    Harmsen, K.

    1977-01-01

    Fractions of Zn, Cd, Cu, Pb, Fe and Mn extractable with water, a salt solution and dilute acid, and residual fractions were determined in soils with raised contents of heavy metals, near zinc smelters, along a river formerly discharging heavy metals, and in a sewage farm. Special attention

  20. Heavy metals precipitation in sewage sludge

    NARCIS (Netherlands)

    Marchioretto, M.M.; Rulkens, W.H.; Bruning, H.

    2005-01-01

    There is a great need for heavy metal removal from strongly metal-polluted sewage sludges. One of the advantages of heavy metal removal from this type of sludge is the possibility of the sludge disposal to landfill with reduced risk of metals being leached to the surface and groundwater. Another

  1. Searching for Jets in Heavy Ion Collisions

    International Nuclear Information System (INIS)

    Salur, Sevil

    2008-01-01

    Jet quenching measurements using leading particles and their correlations suffer from known biases, which can be removed via direct reconstruction of jets in central heavy ion collisions. In this talk, we discuss several modern jet reconstruction algorithms and background subtraction techniques that are appropriate to heavy ion collisions

  2. Campground marketing: the heavy-half strategy

    Science.gov (United States)

    Wilbur F. LaPage

    1969-01-01

    When we arrayed camping frequencies in order from the lowest to the highest number of days spent camping per year we found that half of the campers do much more than half of the camping. Campers in this heavy half consistently camp more, year after year, and are increasing their annual participation as well. Heavy-half campers have larger investments in camping...

  3. RELATIVISTIC HEAVY ION COLLISIONS: EXPERIMENT

    Energy Technology Data Exchange (ETDEWEB)

    Friedlander, Erwin M.; Heckman, Harry H.

    1982-04-01

    Relativistic heavy ion physics began as a 'no man's land' between particle and nuclear physics, with both sides frowning upon it as 'unclean', because on one hand, hadronic interactions and particle production cloud nuclear structure effects, while on the other, the baryonic environment complicates the interpretation of production experiments. They have attempted to review here the experimental evidence on RHI collisions from the point of view that it represents a new endeavor in the understanding of strong interaction physics. Such an approach appears increasingly justified; first, by the accumulation of data and observations of new features of hadronic interactions that could not have been detected outside a baryonic environment; second, by the maturation of the field owing to the advances made over the past several years in experimental inquiries on particle production by RHI, including pions, kaons, hyperons, and searches for antiprotons; and third, by the steady and progressive increase in the energy and mass ranges of light nuclear beams that have become available to the experiment; indeed the energy range has widened from the {approx} 0.2 to 2 AGeV at the Bevalac to {approx}4 AGeV at Dubna and recently, to the quantum jump in energies to {approx} 1000 equivalent AGeV at the CERN PS-ISR. Accompanying these expansions in the energy frontier are the immediate prospects for very heavy ion beams at the Bevalac up to, and including, 1 AGeV {sup 238}U, thereby extending the 'mass frontier' to its ultimate extent.

  4. Medical heavy ion accelerator proposals

    International Nuclear Information System (INIS)

    Gough, R.A.

    1985-05-01

    For several decades, accelerators designed primarily for research in nuclear and high energy physics have been adapted for biomedical research including radiotherapeutic treatment of human diseases such as pituitary disorders, cancer, and more recently, arteriovascular malformations. The particles used in these treatments include pions, protons and heavier ions such as carbon, neon, silicon and argon. Maximum beam energies must be available to penetrate into an equivalent of about 30 cm of water, requiring treatment beams of 250 to 1000 MeV/nucleon. Certain special treatments of superficial melanoma, however, require that beam energies as low as 70 MeV/nucleon also be available. Intensities must be adequate to complete a 100 rad treatment fraction in about 1 minute. For most heavy ion treatments, this corresponds to 10 7 -10 9 ions/second at the patient. Because this research is best conducted in a dedicated, hospital-based facility, and because of the clinical need for ultra-high reliability, the construction of new and dedicated facilities has been proposed. Heavy ion accelerators can provide a variety of ions and energies, permitting treatment plans that exploit the properties of the ion best suited to each individual treatment, and that employ radioactive beams (such as 11 C and 19 Ne) to precisely confirm the dose localization. The favored technical approach in these proposals utilizes a conventional, strong-focusing synchrotron capable of fast switching between ions and energies, and servicing multiple treatment rooms. Specialized techniques for shaping the dose to conform to irregularly-shaped target volumes, while simultaneously sparing surrounding, healthy tissue and critical structures, are employed in each treatment room, together with the sophisticated dosimetry necessary for verification, monitoring, and patient safety. 3 refs., 8 figs

  5. Biological effects of heavy particles

    International Nuclear Information System (INIS)

    Sabatier, L.; Martins, B.; Dutrillaux, B.

    1991-01-01

    The usual definitions of biological dose and biological dosimetry do not fit in case of particles with high linear energy transfer (LET). The dose corresponds to an average value which is not representative of the highly localized energy transfer due to heavy ions. Fortunately, up to now, a biological dosimetry following an exposure to high LET particles is necessary only for cosmonauts. In radiotherapy applications, one exactly knows the nature and energy of incident particle beams. The quality requirements for a good biodosimeter include reliable relation between dose and effect, weak sensitivity to individual variations, reliability and stability of acquired informations against the time delay between exposure and measurements. Nothing is better than the human lymphocyte to be used for measurements that fulfil these requirements. In the case of a manned spaceship, the irradiation dose corresponds to a wide range of radiation (protons, neutrons, heavy ions), and making a dosimetry as well as defining it are of current concern. As yet, there exist two possible definitions, which reduce the dose either to a proton or to a neutron equivalent one. However, such an approximation is not a faithful representation of the irradiation effects and in particular, the long-term effects may be quite different. In the future, it is reasonable to expect an evolution towards technics that enable identifying irradiated cells and quantifying precisely their radiation damage in order to reconstruct the spectrum of particles received by a given cosmonaut in a given time. Let us emphasize that the radiation hazards due to a short stay in space are quite minor, but in the case of a travel to Mars, they cannot be neglected [fr

  6. Heavy Metals Induce Iron Deficiency Responses at Different Hierarchic and Regulatory Levels1[OPEN

    Science.gov (United States)

    2017-01-01

    In plants, the excess of several heavy metals mimics iron (Fe) deficiency-induced chlorosis, indicating a disturbance in Fe homeostasis. To examine the level at which heavy metals interfere with Fe deficiency responses, we carried out an in-depth characterization of Fe-related physiological, regulatory, and morphological responses in Arabidopsis (Arabidopsis thaliana) exposed to heavy metals. Enhanced zinc (Zn) uptake closely mimicked Fe deficiency by leading to low chlorophyll but high ferric-chelate reductase activity and coumarin release. These responses were not caused by Zn-inhibited Fe uptake via IRON-REGULATED TRANSPORTER (IRT1). Instead, Zn simulated the transcriptional response of typical Fe-regulated genes, indicating that Zn affects Fe homeostasis at the level of Fe sensing. Excess supplies of cobalt and nickel altered root traits in a different way from Fe deficiency, inducing only transient Fe deficiency responses, which were characterized by a lack of induction of the ethylene pathway. Cadmium showed a rather inconsistent influence on Fe deficiency responses at multiple levels. By contrast, manganese evoked weak Fe deficiency responses in wild-type plants but strongly exacerbated chlorosis in irt1 plants, indicating that manganese antagonized Fe mainly at the level of transport. These results show that the investigated heavy metals modulate Fe deficiency responses at different hierarchic and regulatory levels and that the interaction of metals with physiological and morphological Fe deficiency responses is uncoupled. Thus, this study not only emphasizes the importance of assessing heavy metal toxicities at multiple levels but also provides a new perspective on how Fe deficiency contributes to the toxic action of individual heavy metals. PMID:28500270

  7. Heavy Metals Induce Iron Deficiency Responses at Different Hierarchic and Regulatory Levels.

    Science.gov (United States)

    Lešková, Alexandra; Giehl, Ricardo F H; Hartmann, Anja; Fargašová, Agáta; von Wirén, Nicolaus

    2017-07-01

    In plants, the excess of several heavy metals mimics iron (Fe) deficiency-induced chlorosis, indicating a disturbance in Fe homeostasis. To examine the level at which heavy metals interfere with Fe deficiency responses, we carried out an in-depth characterization of Fe-related physiological, regulatory, and morphological responses in Arabidopsis ( Arabidopsis thaliana ) exposed to heavy metals. Enhanced zinc (Zn) uptake closely mimicked Fe deficiency by leading to low chlorophyll but high ferric-chelate reductase activity and coumarin release. These responses were not caused by Zn-inhibited Fe uptake via IRON-REGULATED TRANSPORTER (IRT1). Instead, Zn simulated the transcriptional response of typical Fe-regulated genes, indicating that Zn affects Fe homeostasis at the level of Fe sensing. Excess supplies of cobalt and nickel altered root traits in a different way from Fe deficiency, inducing only transient Fe deficiency responses, which were characterized by a lack of induction of the ethylene pathway. Cadmium showed a rather inconsistent influence on Fe deficiency responses at multiple levels. By contrast, manganese evoked weak Fe deficiency responses in wild-type plants but strongly exacerbated chlorosis in irt1 plants, indicating that manganese antagonized Fe mainly at the level of transport. These results show that the investigated heavy metals modulate Fe deficiency responses at different hierarchic and regulatory levels and that the interaction of metals with physiological and morphological Fe deficiency responses is uncoupled. Thus, this study not only emphasizes the importance of assessing heavy metal toxicities at multiple levels but also provides a new perspective on how Fe deficiency contributes to the toxic action of individual heavy metals. © 2017 American Society of Plant Biologists. All Rights Reserved.

  8. Beam losses in heavy ion drivers

    CERN Document Server

    Mustafin, E R; Hofmann, I; Spiller, P J

    2002-01-01

    While beam loss issues have hardly been considered in detail for heavy ion fusion scenarios, recent heavy ion machine developments in different labs (European Organization for Nuclear Research (CERN), Gesellschaft fur Schwerionenforschung (GSI), Institute for Theoretical and Experimental Physics (ITEP), Relativistic Heavy-Ion Collider (RHIC)) have shown the great importance of beam current limitations due to ion losses. Two aspects of beam losses in heavy ion accelerators are theoretically considered: (1) secondary neutron production due to lost ions, and (2) vacuum pressure instability due to charge exchange losses. Calculations are compared and found to be in good agreement with measured data. The application to a Heavy-Ion Driven Inertial Fusion (HIDIF) scenario is discussed. 12 Refs.

  9. Bioremoval of heavy metals by bacterial biomass.

    Science.gov (United States)

    Aryal, Mahendra; Liakopoulou-Kyriakides, Maria

    2015-01-01

    Heavy metals are among the most common pollutants found in the environment. Health problems due to the heavy metal pollution become a major concern throughout the world, and therefore, various treatment technologies such as reverse osmosis, ion exchange, solvent extraction, chemical precipitation, and adsorption are adopted to reduce or eliminate their concentration in the environment. Biosorption is a cost-effective and environmental friendly technique, and it can be used for detoxification of heavy metals in industrial effluents as an alternative treatment technology. Biosorption characteristics of various bacterial species are reviewed here with respect to the results reported so far. The role of physical, chemical, and biological modification of bacterial cells for heavy metal removal is presented. The paper evaluates the different kinetic, equilibrium, and thermodynamic models used in bacterial sorption of heavy metals. Biomass characterization and sorption mechanisms as well as elution of metal ions and regeneration of biomass are also discussed.

  10. Heavy metal uptake of Geosiphon pyriforme

    Energy Technology Data Exchange (ETDEWEB)

    Scheloske, Stefan E-mail: stefan.scheloske@mpi-hd.mpg.de; Maetz, Mischa; Schuessler, Arthur

    2001-07-01

    Geosiphon pyriforme represents the only known endosymbiosis between a fungus, belonging to the arbuscular mycorrhizal (AM) fungi, and cyanobacteria (blue-green algae). Therefore we use Geosiphon as a model system for the widespread AM symbiosis and try to answer some basic questions regarding heavy metal uptake or resistance of AM fungi. We present quantitative micro-PIXE measurements of a set of heavy metals (Cu, Cd, Tl, Pb) taken up by Geosiphon-cells. The uptake is studied as a function of the metal concentration in the nutrient solution and of the time Geosiphon spent in the heavy metal enriched medium. The measured heavy metal concentrations range from several ppm to some hundred ppm. Also the influence of the heavy metal uptake on the nutrition transfer of other elements will be discussed.

  11. Mitochondrial transcription factor A protects human retinal ...

    African Journals Online (AJOL)

    Purpose: To investigate the impact of mitochondrial transcription factor A (TFAM), as a modulator of NF-κB, on proliferation of hypoxia-induced human retinal endothelial cell (HREC), and the probable mechanism. Methods: After exposure to hypoxia (1 % O2) for 5 days, cell proliferation and cell cycle of HREC were ...

  12. RNA Polymerase II–The Transcription Machine

    Indian Academy of Sciences (India)

    Home; Journals; Resonance – Journal of Science Education; Volume 12; Issue 3. RNA Polymerase II – The Transcription Machine - Nobel Prize in Chemistry 2006. Jiyoti Verma Aruna Naorem Anand Kumar Manimala Sen Parag Sadhale. General Article Volume 12 Issue 3 March 2007 pp 47-53 ...

  13. Polyphenol Compound as a Transcription Factor Inhibitor

    Directory of Open Access Journals (Sweden)

    Seyeon Park

    2015-10-01

    Full Text Available A target-based approach has been used to develop novel drugs in many therapeutic fields. In the final stage of intracellular signaling, transcription factor–DNA interactions are central to most biological processes and therefore represent a large and important class of targets for human therapeutics. Thus, we focused on the idea that the disruption of protein dimers and cognate DNA complexes could impair the transcriptional activation and cell transformation regulated by these proteins. Historically, natural products have been regarded as providing the primary leading compounds capable of modulating protein–protein or protein-DNA interactions. Although their mechanism of action is not fully defined, polyphenols including flavonoids were found to act mostly as site-directed small molecule inhibitors on signaling. There are many reports in the literature of screening initiatives suggesting improved drugs that can modulate the transcription factor interactions responsible for disease. In this review, we focus on polyphenol compound inhibitors against dimeric forms of transcription factor components of intracellular signaling pathways (for instance, c-jun/c-fos (Activator Protein-1; AP-1, c-myc/max, Nuclear factor kappa-light-chain-enhancer of activated B cells (NF-κB and β-catenin/T cell factor (Tcf.

  14. Polyphenol Compound as a Transcription Factor Inhibitor.

    Science.gov (United States)

    Park, Seyeon

    2015-10-30

    A target-based approach has been used to develop novel drugs in many therapeutic fields. In the final stage of intracellular signaling, transcription factor-DNA interactions are central to most biological processes and therefore represent a large and important class of targets for human therapeutics. Thus, we focused on the idea that the disruption of protein dimers and cognate DNA complexes could impair the transcriptional activation and cell transformation regulated by these proteins. Historically, natural products have been regarded as providing the primary leading compounds capable of modulating protein-protein or protein-DNA interactions. Although their mechanism of action is not fully defined, polyphenols including flavonoids were found to act mostly as site-directed small molecule inhibitors on signaling. There are many reports in the literature of screening initiatives suggesting improved drugs that can modulate the transcription factor interactions responsible for disease. In this review, we focus on polyphenol compound inhibitors against dimeric forms of transcription factor components of intracellular signaling pathways (for instance, c-jun/c-fos (Activator Protein-1; AP-1), c-myc/max, Nuclear factor kappa-light-chain-enhancer of activated B cells (NF-κB) and β-catenin/T cell factor (Tcf)).

  15. Cross-Family Transcription Factor Interactions

    NARCIS (Netherlands)

    Bemer, Marian; Dijk, van Aalt-Jan; Immink, Richard G.H.; Angenent, Gerco C.

    2017-01-01

    Specific and dynamic gene expression strongly depends on transcription factor (TF) activity and most plant TFs function in a combinatorial fashion. They can bind to DNA and control the expression of the corresponding gene in an additive fashion or cooperate by physical interactions, forming larger

  16. Corticosteroid receptors adopt distinct cyclical transcriptional signatures.

    Science.gov (United States)

    Le Billan, Florian; Amazit, Larbi; Bleakley, Kevin; Xue, Qiong-Yao; Pussard, Eric; Lhadj, Christophe; Kolkhof, Peter; Viengchareun, Say; Fagart, Jérôme; Lombès, Marc

    2018-05-07

    Mineralocorticoid receptors (MRs) and glucocorticoid receptors (GRs) are two closely related hormone-activated transcription factors that regulate major pathophysiologic functions. High homology between these receptors accounts for the crossbinding of their corresponding ligands, MR being activated by both aldosterone and cortisol and GR essentially activated by cortisol. Their coexpression and ability to bind similar DNA motifs highlight the need to investigate their respective contributions to overall corticosteroid signaling. Here, we decipher the transcriptional regulatory mechanisms that underlie selective effects of MRs and GRs on shared genomic targets in a human renal cellular model. Kinetic, serial, and sequential chromatin immunoprecipitation approaches were performed on the period circadian protein 1 ( PER1) target gene, providing evidence that both receptors dynamically and cyclically interact at the same target promoter in a specific and distinct transcriptional signature. During this process, both receptors regulate PER1 gene by binding as homo- or heterodimers to the same promoter region. Our results suggest a novel level of MR-GR target gene regulation, which should be considered for a better and integrated understanding of corticosteroid-related pathophysiology.-Le Billan, F., Amazit, L., Bleakley, K., Xue, Q.-Y., Pussard, E., Lhadj, C., Kolkhof, P., Viengchareun, S., Fagart, J., Lombès, M. Corticosteroid receptors adopt distinct cyclical transcriptional signatures.

  17. Transcriptional networks in epithelial-mesenchymal transition.

    Directory of Open Access Journals (Sweden)

    Christo Venkov

    Full Text Available Epithelial-mesenchymal transition (EMT changes polarized epithelial cells into migratory phenotypes associated with loss of cell-cell adhesion molecules and cytoskeletal rearrangements. This form of plasticity is seen in mesodermal development, fibroblast formation, and cancer metastasis.Here we identify prominent transcriptional networks active during three time points of this transitional process, as epithelial cells become fibroblasts. DNA microarray in cultured epithelia undergoing EMT, validated in vivo, were used to detect various patterns of gene expression. In particular, the promoter sequences of differentially expressed genes and their transcription factors were analyzed to identify potential binding sites and partners. The four most frequent cis-regulatory elements (CREs in up-regulated genes were SRY, FTS-1, Evi-1, and GC-Box, and RNA inhibition of the four transcription factors, Atf2, Klf10, Sox11, and SP1, most frequently binding these CREs, establish their importance in the initiation and propagation of EMT. Oligonucleotides that block the most frequent CREs restrain EMT at early and intermediate stages through apoptosis of the cells.Our results identify new transcriptional interactions with high frequency CREs that modulate the stability of cellular plasticity, and may serve as targets for modulating these transitional states in fibroblasts.

  18. Heavy ion program at BNL: AGS, RHIC [Relativistic Heavy Ion Collider

    International Nuclear Information System (INIS)

    Barton, D.S.

    1987-01-01

    With the recent commissioning of fixed target, heavy ion physics at the AGS, Brookhaven National Laboratory (BNL) has embarked on a long range program in support of relativistic heavy ion research. Acceleration of low mass heavy ions (up to sulfur) to an energy of about 14.5 GeV/nucleon is possible with the direct connection of the BNL Tandem Van de Graaff and AGS accelerators. When completed, the new booster accelerator will provide heavy ions over the full mass range for injection and subsequent acceleration in the AGS. BNL is now engaged in an active R and D program directed toward the proposed Relativistic Heavy Ion Collider (RHIC). The results of the first operation of the low mass heavy ion program will be reviewed, and future expectations discussed. The expected performance for the heavy ion operation of the booster will be described and finally, the current status and outlook for the RHIC facility will be presented

  19. Combined toxicity and underlying mechanisms of a mixture of eight heavy metals.

    Science.gov (United States)

    Zhou, Qi; Gu, Yuanliang; Yue, Xia; Mao, Guochuan; Wang, Yafei; Su, Hong; Xu, Jin; Shi, Hongbo; Zou, Baobo; Zhao, Jinshun; Wang, Renyuan

    2017-02-01

    With the rapid development of modernization and industrialization in China, a large quantity of heavy metals, including zinc, copper, lead, cadmium and mercury, have been entering the atmosphere, soil and water, the latter being the primary route of pollution. In the present study, in vitro experiments were performed to examine the joint toxicity and the underlying mechanisms of the eight most common heavy metals contaminating offshore waters on the eastern coast of Ningbo region. Using a cell cycle assay, cell apoptosis and reactive oxygen species (ROS) detection methods, the present study demonstrated that the heavy metal mixture arrested JB6 cells at the S phase, induced the generation of ROS and cell apoptosis. A luciferase assay indicated that the levels of activator protein‑1 and nuclear factor‑κB transcription factors were upregulated. Upregulation of the protein levels of C‑jun and p65 were detected in the JB6 cells by western blot analysis; these two genes have important roles in cell carcinogenesis. These results provide a useful reference for further investigations on the combined toxicity of the exposure to multiple heavy metals.

  20. Comparative proteomics analysis of sheep sperm under two doses of heavy ion to irradiation

    International Nuclear Information System (INIS)

    Li Hongyan; Zhao Xingxu; He Yuxuan; Zhang Yong; Zhang Hong; Wang Yanling; Li Fadi; Ma Youji

    2011-01-01

    The object of this study was to investigate differential proteomic expressions in sheep sperm protein under two doses (0.5 and 0.3 kGy) heavy ion radiation. The current research presented the protein changes using two-dimensional gel electrophoresis (2-DE) after staining with silver nitrate, differential expression proteins were detected by PDQuest 8.0 software and subjected to ion trap mass spectrometer equipped with a Surveyor HPLC system, and differential spots of protein were identified. Results showed that eight common different expressed protein spots in two doses 2D gels were identified to be three up-regulated proteins (glutaredoxin -1, transcription factor AP -2-alpha and enolase). It was concluded that there was significant difference at protein level in sheep sperm after heavy ion radiation and differential proteome expression analysis may be useful to clarify the physiology state of sheep sperm in heavy ion radiation, which laid a foundation for the further studies on heavy ion radiation of sheep sperm proteomics. (authors)

  1. Heavy Metal Blood Test: MedlinePlus Lab Test Information

    Science.gov (United States)

    ... this page: https://medlineplus.gov/labtests/heavymetalbloodtest.html Heavy Metal Blood Test To use the sharing features ... this page, please enable JavaScript. What is a Heavy Metal Blood Test? A heavy metal blood test ...

  2. Proteins mediating DNA loops effectively block transcription.

    Science.gov (United States)

    Vörös, Zsuzsanna; Yan, Yan; Kovari, Daniel T; Finzi, Laura; Dunlap, David

    2017-07-01

    Loops are ubiquitous topological elements formed when proteins simultaneously bind to two noncontiguous DNA sites. While a loop-mediating protein may regulate initiation at a promoter, the presence of the protein at the other site may be an obstacle for RNA polymerases (RNAP) transcribing a different gene. To test whether a DNA loop alters the extent to which a protein blocks transcription, the lac repressor (LacI) was used. The outcome of in vitro transcription along templates containing two LacI operators separated by 400 bp in the presence of LacI concentrations that produced both looped and unlooped molecules was visualized with scanning force microscopy (SFM). An analysis of transcription elongation complexes, moving for 60 s at an average of 10 nt/s on unlooped DNA templates, revealed that they more often surpassed LacI bound to the lower affinity O2 operator than to the highest affinity Os operator. However, this difference was abrogated in looped DNA molecules where LacI became a strong roadblock independently of the affinity of the operator. Recordings of transcription elongation complexes, using magnetic tweezers, confirmed that they halted for several minutes upon encountering a LacI bound to a single operator. The average pause lifetime is compatible with RNAP waiting for LacI dissociation, however, the LacI open conformation visualized in the SFM images also suggests that LacI could straddle RNAP to let it pass. Independently of the mechanism by which RNAP bypasses the LacI roadblock, the data indicate that an obstacle with looped topology more effectively interferes with transcription. © 2017 The Authors Protein Science published by Wiley Periodicals, Inc. on behalf of The Protein Society.

  3. AIDing Chromatin and Transcription-Coupled Orchestration of Immunoglobulin Class-Switch Recombination

    Science.gov (United States)

    Vaidyanathan, Bharat; Yen, Wei-Feng; Pucella, Joseph N.; Chaudhuri, Jayanta

    2014-01-01

    Secondary diversification of the antibody repertoire upon antigenic challenge, in the form of immunoglobulin heavy chain (IgH) class-switch recombination (CSR) endows mature, naïve B cells in peripheral lymphoid organs with a limitless ability to mount an optimal humoral immune response, thus expediting pathogen elimination. CSR replaces the default constant (CH) region exons (Cμ) of IgH with any of the downstream CH exons (Cγ, Cε, or Cα), thereby altering effector functions of the antibody molecule. This process depends on, and is orchestrated by, activation-induced deaminase (AID), a DNA cytidine deaminase that acts on single-stranded DNA exposed during transcription of switch (S) region sequences at the IgH locus. DNA lesions thus generated are processed by components of several general DNA repair pathways to drive CSR. Given that AID can instigate DNA lesions and genomic instability, stringent checks are imposed that constrain and restrict its mutagenic potential. In this review, we will discuss how AID expression and substrate specificity and activity is rigorously enforced at the transcriptional, post-transcriptional, post-translational, and epigenetic levels, and how the DNA-damage response is choreographed with precision to permit targeted activity while limiting bystander catastrophe. PMID:24734031

  4. A diquark model for baryons containing one heavy quark

    International Nuclear Information System (INIS)

    Ebert, D.; Feldmann, T.; Kettner, C.; Reinhardt, H.

    1995-06-01

    We present a phenomenological ansatz for coupling a heavy quark with two light quarks to form a heavy baryon. The heavy quark is treated in the heavy mass limit, and the light quark dynamics is approximated by propagating scalar and axial vector 'diquarks'. The resulting effective lagrangian, which incorporates heavy quark and chiral symmetry, describes interactions of heavy baryons with Goldstone bosons in the low energy region. As an application, the Isgur-Wise formfactors are estimated. (orig.)

  5. Method to determine transcriptional regulation pathways in organisms

    Science.gov (United States)

    Gardner, Timothy S.; Collins, James J.; Hayete, Boris; Faith, Jeremiah

    2012-11-06

    The invention relates to computer-implemented methods and systems for identifying regulatory relationships between expressed regulating polypeptides and targets of the regulatory activities of such regulating polypeptides. More specifically, the invention provides a new method for identifying regulatory dependencies between biochemical species in a cell. In particular embodiments, provided are computer-implemented methods for identifying a regulatory interaction between a transcription factor and a gene target of the transcription factor, or between a transcription factor and a set of gene targets of the transcription factor. Further provided are genome-scale methods for predicting regulatory interactions between a set of transcription factors and a corresponding set of transcriptional target substrates thereof.

  6. The future for heavy crude oil

    International Nuclear Information System (INIS)

    Horsnell, P.

    1995-01-01

    The expectation, still held in 1993, that the light oil-heavy crude oil differential would go on increasing in favour of light oil has not been fulfilled. Current perceptions are that heavy oil will continue to be relatively strong and there is no inevitable upward trend in light-heavy crude differentials. Non-OPEC production has grown significantly lighter overall in recent years and is likely to continue so for several more years. This is due to expanded light oil production in the North Sea, Latin America and the Far East, and contractions in heavy oil production in Russia and the USA. OPEC production has also become lighter with, in particular, an expansion in light oil and contraction in heavy grades from Saudi Arabia. At the same time, the nature of the demand from refineries has changed with the introduction of new units designed to process the residium from heavy oil distillation. Thus the supply of light oil has expanded while demand for it has contracted with the reverse being true for heavy oil. (2 figures, 1 table) (UK)

  7. Fragmentation functions of polarized heavy quarkonium

    International Nuclear Information System (INIS)

    Ma, Yan-Qing; Qiu, Jian-Wei; Zhang, Hong

    2015-01-01

    Investigating the production of polarized heavy quarkonia in terms of recently proposed QCD factorization formalism requires the knowledge of a large number of input fragmentation functions (FFs) from a single parton or a heavy quark-antiquark pair to a polarized heavy quarkonium. We study these universal FFs at the input factorization scale μ 0 ≳2m Q , with heavy quark mass m Q , in the framework of nonrelativistic QCD (NRQCD) factorization. We express these FFs in terms of perturbatively calculable coefficients for producing a heavy quark-antiquark pair in all possible NRQCD states, multiplied by corresponding NRQCD long-distance matrix elements for the pair to transmute into a polarized heavy quarkonium. We derive all relevant NRQCD operators for the long-distance matrix elements based on symmetries, and introduce a self-consistent scheme to define them in arbitrary d-dimensions. We compute, up to the first non-trivial order in α s , the perturbative coefficients for producing a heavy quark pair in all possible S-wave and P-wave NRQCD states. We also discuss the role of the polarized FFs in generating QCD predictions for the polarization of J/ψ produced at collider energies.

  8. Horizontal well impact on heavy oil supply

    International Nuclear Information System (INIS)

    Bowers, B.; Bielecki, J.; Hu, J.; Wall, B.; Drummond, K.

    1993-01-01

    Horizontal wells can take advantage of gravity drainage mechanisms, which can be important in conventional heavy oil and bitumen recovery. Horizontal drilling will impact on the development of established conventional heavy oil pools by infill drilling and application of enhanced recovery techniques. There will also be an impact on the development of extensions to established and newly discovered heavy oil pools, as well as a major impact on development of bitumen resources. To assess the impact of horizontal drilling on heavy oil supply, high-impact and low-impact scenarios were evaluated under specified oil-price assumptions for four heavy oil areas in Saskatchewan and Alberta. Horizontal well potential for infill drilling, waterflood projects, and thermal projects was assessed and estimates were made of such developments as reserves additions and heavy oil development wells under the two scenarios. In the low case, projected supply of conventional heavy oil and bitumen stabilizes at a level in the 90,000-94,000 m 3 /d after 1994. In the high case, overall supply continuously grows from 80,000 m 3 /d in 1992 to 140,000 m 3 /d in 2002. Through application of horizontal drilling, reserves additions in western Canada could be improved by ca 100 million m 3 by 2002. 14 figs., 6 tabs

  9. Biomolecules for Removal of Heavy Metal.

    Science.gov (United States)

    Singh, Namita Ashish

    2017-01-01

    Patents reveal that heavy metals are natural constituents of the earth's crust, but some heavy metals like cadmium, lead, mercury, arsenic etc. are injurious to living organisms at higher concentration. Nowadays, anthropogenic activities have altered geochemical cycles and biochemical balance of heavy metals. Biomolecules are used nowadays for removal of heavy metals compared to other synthetic biosorbents due to their environmental friendly nature and cost effectiveness. The goal of this work is to identify the role of biomolecules like polysaccharides, polypeptides, natural compounds containing aromatic acid etc. for heavy metal removal by bio sorption. It has been observed that efficiency of biomolecules can be increased by functionalization e.g. cellulose functionalization with EDTA, chitosan with sulphur groups, alginate with carboxyl/ hydroxyl group etc. It was found that the porous structure of aerogel beads improves both sorption and kinetic properties of the material. Out of polypeptides metallothionein has been widely used for removal of heavy metal up to 88% from seawater after a single centrifugation. These cost effective functionalized biomolecules are significantly used for remediation of heavy metals by immobilizing these biomolecules onto materials. Copyright© Bentham Science Publishers; For any queries, please email at epub@benthamscience.org.

  10. Post-transcription cleavage generates the 3' end of F17R transcripts in vaccinia virus

    International Nuclear Information System (INIS)

    D'Costa, Susan M.; Antczak, James B.; Pickup, David J.; Condit, Richard C.

    2004-01-01

    Most vaccinia virus intermediate and late mRNAs possess 3' ends that are extremely heterogeneous in sequence. However, late mRNAs encoding the cowpox A-type inclusion protein (ATI), the second largest subunit of the RNA polymerase, and the late telomeric transcripts possess homogeneous 3' ends. In the case of the ATI mRNA, it has been shown that the homogeneous 3' end is generated by a post-transcriptional endoribonucleolytic cleavage event. We have determined that the F17R gene also produces homogeneous transcripts generated by a post-transcriptional cleavage event. Mapping of in vivo mRNA shows that the major 3' end of the F17R transcript maps 1262 nt downstream of the F17R translational start site. In vitro transcripts spanning the in vivo 3' end are cleaved in an in vitro reaction using extracts from virus infected cells, and the site of cleavage is the same both in vivo and in vitro. Cleavage is not observed using extract from cells infected in the presence of hydroxyurea; therefore, the cleavage factor is either virus-coded or virus-induced during the post-replicative phase of virus replication. The cis-acting sequence responsible for cleavage is orientation specific and the factor responsible for cleavage activity has biochemical properties similar to the factor required for cleavage of ATI transcripts. Partially purified cleavage factor generates cleavage products of expected size when either the ATI or F17R substrates are used in vitro, strongly suggesting that cleavage of both transcripts is mediated by the same factor

  11. Characterization and metal-induced gene transcription of two new copper zinc superoxide dismutases in the solitary ascidian Ciona intestinalis

    International Nuclear Information System (INIS)

    Ferro, Diana; Franchi, Nicola; Mangano, Valentina; Bakiu, Rigers; Cammarata, Matteo; Parrinello, Nicolò; Santovito, Gianfranco; Ballarin, Loriano

    2013-01-01

    Highlights: •Ciona intestinalis express two copper-zinc superoxide dismutases (Cu,Zn SODs), one extracellular (Ci-SODa) and one intracellular isoform (Ci-SODb). •Promoters contain consensus sequences similar to mammalian MRE. •Metal exposure results in a significant increase of gene transcription: ci-soda is induced especially by copper and zinc, the increase of ci-sodb transcription is more evident after cadmium exposure. •Genes are mostly transcribed in circulating hemocytes and in ovarian follicular cells. -- Abstract: Antioxidant enzymes are known to protect living organisms against the oxidative stress risk, also induced by metals. In the present study, we describe the purification and molecular characterization of two Cu,Zn superoxide dismutases (SODs), referred to as Ci-SODa and Ci-SODb, from Ciona intestinalis, a basal chordate widely distributed in temperate shallow seawater. The putative amino acid sequences were compared with Cu,Zn SODs from other metazoans and phylogenetic analyses indicate that the two putative Ci-SODs are more related to invertebrate SODs than vertebrate ones. Both phylogenetic and preliminary homology modeling analyses suggest that Ci-SODa and Ci-SODb are extracellular and intracellular isoform, respectively. The mRNA of the two Cu,Zn SODs was localized in hemocytes and in ovarian follicular cells, as revealed by in situ hybridization. The time course of SOD mRNA levels in the presence of three different metals showed upregulation of ci-soda and inhibition of ci-sodb. Spectrophotometric analysis confirms the presence of SOD activity in Ciona tissues. Our in silico analyses of the ci-soda promoter region revealed putative consensus sequences similar to mammalian metal-responsive elements (MRE), suggesting that the transcription of these genes directly depends on metals. These data emphasize the importance of complex metal regulation of ci-soda and ci-sodb transcription, as components of an efficient detoxification pathway

  12. Characterization and metal-induced gene transcription of two new copper zinc superoxide dismutases in the solitary ascidian Ciona intestinalis

    Energy Technology Data Exchange (ETDEWEB)

    Ferro, Diana [Department of Biology, University of Padova, Padova (Italy); Institute for Evolution and Biodiversity, Westfälische Wilhelms-Universität, Münster (Germany); Franchi, Nicola [Department of Biology, University of Padova, Padova (Italy); Department of Biological, Chemical, Pharmaceutical Science and Technology, University of Palermo, Palermo (Italy); Mangano, Valentina [Department of Biological, Chemical, Pharmaceutical Science and Technology, University of Palermo, Palermo (Italy); Bakiu, Rigers [Department of Crop Production, Agricultural University of Tirana, Tirana (Albania); Cammarata, Matteo; Parrinello, Nicolò [Department of Biological, Chemical, Pharmaceutical Science and Technology, University of Palermo, Palermo (Italy); Santovito, Gianfranco, E-mail: gianfranco.santovito@unipd.it [Department of Biology, University of Padova, Padova (Italy); Ballarin, Loriano [Department of Biology, University of Padova, Padova (Italy)

    2013-09-15

    Highlights: •Ciona intestinalis express two copper-zinc superoxide dismutases (Cu,Zn SODs), one extracellular (Ci-SODa) and one intracellular isoform (Ci-SODb). •Promoters contain consensus sequences similar to mammalian MRE. •Metal exposure results in a significant increase of gene transcription: ci-soda is induced especially by copper and zinc, the increase of ci-sodb transcription is more evident after cadmium exposure. •Genes are mostly transcribed in circulating hemocytes and in ovarian follicular cells. -- Abstract: Antioxidant enzymes are known to protect living organisms against the oxidative stress risk, also induced by metals. In the present study, we describe the purification and molecular characterization of two Cu,Zn superoxide dismutases (SODs), referred to as Ci-SODa and Ci-SODb, from Ciona intestinalis, a basal chordate widely distributed in temperate shallow seawater. The putative amino acid sequences were compared with Cu,Zn SODs from other metazoans and phylogenetic analyses indicate that the two putative Ci-SODs are more related to invertebrate SODs than vertebrate ones. Both phylogenetic and preliminary homology modeling analyses suggest that Ci-SODa and Ci-SODb are extracellular and intracellular isoform, respectively. The mRNA of the two Cu,Zn SODs was localized in hemocytes and in ovarian follicular cells, as revealed by in situ hybridization. The time course of SOD mRNA levels in the presence of three different metals showed upregulation of ci-soda and inhibition of ci-sodb. Spectrophotometric analysis confirms the presence of SOD activity in Ciona tissues. Our in silico analyses of the ci-soda promoter region revealed putative consensus sequences similar to mammalian metal-responsive elements (MRE), suggesting that the transcription of these genes directly depends on metals. These data emphasize the importance of complex metal regulation of ci-soda and ci-sodb transcription, as components of an efficient detoxification pathway

  13. Heavy metals in municipal solid waste deposits

    Energy Technology Data Exchange (ETDEWEB)

    Flyhammar, P.

    1997-12-01

    Extensive use of heavy metals in modern society influences routes followed by fluxes on the surface of the Earth. The changed flow paths may be harmful for the balance of biological systems at different levels, micro-organisms, human beings and whole ecosystems, since the toxicity of heavy metals is determined by their concentrations and chemical forms. Despite the low mobility of heavy metals (Zn, Cu, Pb, Cr, Ni and Cd) in municipal landfills, it was found that extensive transformations of the binding forms of heavy metal take place within the waste mass during the degradation of the waste. These changes appear to be closely related to the development of early diagenetic solid phases, i.e. new secondary solid phases formed in the waste. The heavy metals often constitute a minor part of these phases and the bindings include several forms such as adsorption, complexation, coprecipitation, precipitation, etc. It was also found that the associations between heavy metals and solid phases are dominated by several binding forms to one specific substrate rather than bindings to various solid phases. The mobility of iron and manganese seems to increase during the processes involved in waste degradation due to the solution of oxide/hydroxide phases, while the heavy metals appear to become less mobile due to their binding to organic compounds and sulphides. However, one exception in this case may be nickel. Another aspect of the transformation of heavy metals is the accumulation of pools of heavy metals which can become susceptible to environmental changes, such as oxidation or acidification. However, the risk of increased mobilization caused by lower pH values seem to be limited since municipal solid waste has a large buffer capacity. 66 refs, 9 figs, 3 tabs 66 refs, 9 figs, 3 tabs

  14. Heavy-quark physics in quantum chromodynamics

    International Nuclear Information System (INIS)

    Brodsky, S.J.

    1991-04-01

    Heavy quarks can expose new symmetries and novel phenomena in QCD not apparent in ordinary hadronic systems. In these lectures I discuss the use of effective-Lagrangian and light-cone Fock methods to analyze exclusive heavy hadron decays such as Υ → p bar p and B → ππ, and also to derive effective Schroedinger and Dirac equations for heavy quark systems. Two contributions to the heavy quark structure functions of the proton and other light hadrons are identified: an ''extrinsic'' contribution associated with leading twist QCD evolution of the gluon distribution, and a higher twist ''intrinsic'' contribution due to the hardness of high-mass fluctuations of multi-gluon correlations in hadronic wavefunctions. A non-perturbative calculation of the heavy quark distribution of a meson in QCD in one space and one time is presented. The intrinsic higher twist contributions to the pion and proton structure functions can dominate the hadronic production of heavy quark systems at large longitudinal momentum fraction x F and give anomalous contributions to the quark structure functions of ordinary hadrons at large x bj . I also discuss a number of ways in which heavy quark production in nuclear targets can test fundamental QCD phenomena and provide constraints on hadronic wavefunctions. The topics include color transparency, finite formation time, and predictions for charm production at threshold, including nuclear-bound quarkonium. I also discuss a number of QCD mechanisms for the suppression of J/ψ and Υ production in nuclear collisions, including gluon shadowing, the peripheral excitation of intrinsic heavy quark components at large x F , and the coalescence of heavy quarks with co-moving spectators at low x F

  15. Measurement of concentration of heavy water

    International Nuclear Information System (INIS)

    Tsukamoto, Yuichi; Kondo, Mitsuo; Sakurai, Naoyuki

    1979-01-01

    The concentration of heavy water is measured as one of the technical management in the Fugen plant. The heavy water is used as the moderator in the reactor. The measuring method depends on the theory of light absorption. The light absorption range of heavy water spreads from near infrared to infrared zone. The near infrared absorption was adopted for the purpose, as the absorption is much larger in infrared zone, and the measurement has to be conducted, limiting the apparent absorption. This measuring method is available to determine the concentration of heavy water in the broad range exactly. The preparation of heavy water sample and the measurement of the absorption spectra of near infrared ray are explained, as the experimental procedure. The sample cell was made of quartz, and the spectroscope was the Hitachi 323 type. The resolving power is 100 nm and 27 nm for the wave length of 1000 nm and 2500 nm, respectively. Concerning the measured results, the absorption was recorded in the wave length range from 600 nm to 2600 nm, and for the heavy water concentration range from 0 to 99.77 wt. %. The peaks of absorption were located at the wave length of 1450, 1660, 1920, 1970, 2020 and 2600 nm. The three kinds of fundamental vibration mode of the molecules of both light and heavy water are shown, and the peaks belong to H 2 O, HDO and D 2 O, respectively. The relation between the absorption and the heavy water concentration, and that between the transmissivity and the wave length are shown, when the cell thickness was varied to 5 mm and 20 mm, and the heavy water concentration to 21%, 62% and 99.85%. (Nakai, Y.)

  16. Cyclin D3 interacts with human activating transcription factor 5 and potentiates its transcription activity

    International Nuclear Information System (INIS)

    Liu Wenjin; Sun Maoyun; Jiang Jianhai; Shen Xiaoyun; Sun Qing; Liu Weicheng; Shen Hailian; Gu Jianxin

    2004-01-01

    The Cyclin D3 protein is a member of the D-type cyclins. Besides serving as cell cycle regulators, D-type cyclins have been reported to be able to interact with several transcription factors and modulate their transcriptional activations. Here we report that human activating transcription factor 5 (hATF5) is a new interacting partner of Cyclin D3. The interaction was confirmed by in vivo coimmunoprecipitation and in vitro binding analysis. Neither interaction between Cyclin D1 and hATF5 nor interaction between Cyclin D2 and hATF5 was observed. Confocal microscopy analysis showed that Cyclin D3 could colocalize with hATF5 in the nuclear region. Cyclin D3 could potentiate hATF5 transcriptional activity independently of its Cdk4 partner. But Cyclin D1 and Cyclin D2 had no effect on hATF5 transcriptional activity. These data provide a new clue to understand the new role of Cyclin D3 as a transcriptional regulator

  17. Transcriptional and post-transcriptional regulation of nucleotide excision repair genes in human cells

    Energy Technology Data Exchange (ETDEWEB)

    Lefkofsky, Hailey B. [Translational Oncology Program, University of Michigan Medical School, Ann Arbor, MI (United States); Veloso, Artur [Translational Oncology Program, University of Michigan Medical School, Ann Arbor, MI (United States); Department of Radiation Oncology, University of Michigan Medical School, Ann Arbor, MI (United States); Bioinformatics Program, Department of Computational Medicine and Bioinformatics, University of Michigan, Ann Arbor, MI (United States); Ljungman, Mats, E-mail: ljungman@umich.edu [Translational Oncology Program, University of Michigan Medical School, Ann Arbor, MI (United States); Department of Radiation Oncology, University of Michigan Medical School, Ann Arbor, MI (United States); Department of Environmental Health Sciences, School of Public Health, University of Michigan, Ann Arbor, MI (United States)

    2015-06-15

    Nucleotide excision repair (NER) removes DNA helix-distorting lesions induced by UV light and various chemotherapeutic agents such as cisplatin. These lesions efficiently block the elongation of transcription and need to be rapidly removed by transcription-coupled NER (TC-NER) to avoid the induction of apoptosis. Twenty-nine genes have been classified to code for proteins participating in nucleotide excision repair (NER) in human cells. Here we explored the transcriptional and post-transcriptional regulation of these NER genes across 13 human cell lines using Bru-seq and BruChase-seq, respectively. Many NER genes are relatively large in size and therefore will be easily inactivated by UV-induced transcription-blocking lesions. Furthermore, many of these genes produce transcripts that are rather unstable. Thus, these genes are expected to rapidly lose expression leading to a diminished function of NER. One such gene is ERCC6 that codes for the CSB protein critical for TC-NER. Due to its large gene size and high RNA turnover rate, the ERCC6 gene may act as dosimeter of DNA damage so that at high levels of damage, ERCC6 RNA levels would be diminished leading to the loss of CSB expression, inhibition of TC-NER and the promotion of cell death.

  18. IR analyzer spots heavy water leaks

    International Nuclear Information System (INIS)

    Anon.

    1978-01-01

    A correlation spectrometer developed by Barringer Research Ltd. (in collaboration with Atomic Energy of Canada and Ontario Hydro) is used to measure HDO concentrations in DTO in the final (distillation) stage of heavy-water production. A unit has been installed at Bruce Heavy Water Plant. Previously, such spectrometers had been installed to detect heavy-water leaks in CANDU reactors. The principle on which the instrument works is explained, with illustrations. It works by comparing the absorption at 2.9 μm, due to HDO, with that at 2.6 μm, due to both HDO and D 2 O. (N.D.H.)

  19. MICROBIAL REMOVAL OF HEAVY METALS FROM WASTEWATER

    Directory of Open Access Journals (Sweden)

    Justyna Koc-Jurczyk

    2014-10-01

    Full Text Available Industrialization and urbanization result in increase of heavy metals released into the environment (soil, lakes, rivers, seas, oceans, groundwater. Studies on biosorption of heavy metals are aimed to specify types of microorganisms which could efficiently bind metals. This approach has a very important significance for both slowing down metals exploitation by recovery, and also reduction of environmental pollution by decrease of their excessive concentration. Recent studies have reported about the capabilities of fungi, algae, yeasts, bacteria, waste and agricultural residues or materials containing chitosan derived from crustacean shells as a biosorbents. Biohydrometallurgy could be considered as a new “green” technology of heavy metals removal from wastewater.

  20. Heavy Ion Fusion Accelerator Research (HIFAR)

    International Nuclear Information System (INIS)

    1991-04-01

    This report discusses the following topics: emittance variations in current-amplifying ion induction lina; transverse emittance studies of an induction accelerator of heavy ions; drift compression experiments on MBE-4 and related emittance; low emittance uniform- density C s + sources for heavy ion fusion accelerator studies; survey of alignment of MBE-4; time-of-flight dependence on the MBE-4 quadrupole voltage; high order calculation of the multiple content of three dimensional electrostatic geometries; an induction linac injector for scaled experiments; induction accelerator test module for HIF; longitudinal instability in HIF beams; and analysis of resonant longitudinal instability in a heavy ion induction linac

  1. Heavy quark energy loss in nuclear medium

    International Nuclear Information System (INIS)

    Zhang, Benr-Wei; Wang, Enke; Wang, Xin-Nian

    2003-01-01

    Multiple scattering, modified fragmentation functions and radiative energy loss of a heavy quark propagating in a nuclear medium are investigated in perturbative QCD. Because of the quark mass dependence of the gluon formation time, the medium size dependence of heavy quark energy loss is found to change from a linear to a quadratic form when the initial energy and momentum scale are increased relative to the quark mass. The radiative energy loss is also significantly suppressed relative to a light quark due to the suppression of collinear gluon emission by a heavy quark

  2. Experimental Search for a Heavy Electron

    Science.gov (United States)

    Boley, C. D.; Elias, J. E.; Friedman, J. I.; Hartmann, G. C.; Kendall, H. W.; Kirk, P.N.; Sogard, M. R.; Van Speybroeck, L. P.; de Pagter, J. K.

    1967-09-01

    A search for a heavy electron of the type considered by Low and Blackmon has been made by studying the inelastic scattering of 5 BeV electrons from hydrogen. The search was made over a range of values of the mass of the heavy electron from 100 t0 1300 MeV. No evidence for such a particle was observed. Upper limits on the production cross sections were determined and employed to deducelimits on the values of the electron-photon-heavy electron coupling constant in Low and Blackmon=s theory.

  3. Search for heavy neutrino production at PEP

    International Nuclear Information System (INIS)

    Feldman, G.J.

    1985-10-01

    We report a search for long-lived heavy neutrinos produced by the neutral weak current in e + e - annihilation at 29 GeV at PEP. Data from the Mark II detector are examined for evidence of events with one or two separated vertices in the radial range of 2 mm to 10 cm. No events were found that were consistent with the hypothesis of heavy neutrino production, eliminating the possibility of heavy neutrinos with decay lengths of 1 to 20 cm in mass range 1 to 13 GeV/c 2

  4. Respectives of heavy ion physics in JINR

    International Nuclear Information System (INIS)

    Flerov, G.N.

    1983-01-01

    Perspectives of heavy ion physics in JINR are discussed. The main attention is paid to directions that are connected with the application of intensive beams of U-400 cyclotron. Experiments into studying stability limits of heavy atomic nuclei are considered. The possibility of using beams of heavy ions in applied fields, particularly for the production of very thin nuclear filters is noted. Prospects of synthesis of superheavy elements (SHE) and SHE search in nature are also considered. The data on the events of spontaneous fission found in meteorite and hydrotherms and the data on lengths of tracks in olivines from meteorite prove the possibility of obtaining evidences of SHE existence in nature

  5. Heavy duty plasma spray gun

    International Nuclear Information System (INIS)

    Irons, G.C.; Klein, J.F.; Lander, R.D.; Thompson, H.C.; Trapani, R.D.

    1984-01-01

    A heavy duty plasma spray gun for extended industrial service is disclosed. The gun includes a gas distribution member made of a material having a coefficient of expansion different from that of the parts surrounding it. The gas distribution member is forcibly urged by a resilient member such as a coiled spring against a seal so as to assure the plasma gas is introduced into the gun arc in a manner only defined by the gas distribution member. The gun has liquid cooling for the nozzle (anode) and the cathode. Double seals are provided between the coolant and the arc region and a vent is provided between the seals which provides an indication when a seal has failed. Some parts of the gun are electrically isolated from others by an intermediate member which is formed as a sandwich of two rigid metal face pieces and an insulator disposed between them. The metal face pieces provide a rigid body to attach the remaining parts in proper alignment therewith

  6. Heavy quark and sparticle phenomenology

    International Nuclear Information System (INIS)

    Barger, V.

    1985-01-01

    Data from the CERN p anti p collider provide a new avenue for the study of heavy-quark production and possibly also provide the first indication for the sparticles of supersymmetry. This discussion of the associated phenomenology begins with charm and bottom quarks, proceeds to the strategies that lead to top quark identification, and concludes with possible supersymmetry scenarios to explain the events observed by the UA1 collaboration with large missing transverse momentum. The fusion predictions of single muon and dimuon rates are in the ballpark of UA1 observations. The discovery of isolated like-sign dimuons is at present an anomaly. The p anti p collider is a good place to do B physics, and answer the question of whether B 0 - anti B 0 mixing occurs. Also, it should soon be possible to identify a few dimuon events of W → t anti b and t anti t origins. Finally, enhanced charm in jets, if established, would have to be ascribed to non-perturbative QCD effects. In conclusion, if the UA1 monojets are of supersymmetry origin, then squark and gluino masses are already tightly constrained and dijet events with large missing transverse momentum should help distinguish between the two most promising scenarios. The top signal is not being faked by sparticles. (Nogami, K.)

  7. Groundwater response to heavy precipitation

    International Nuclear Information System (INIS)

    Waring, C.; Bradd, J.; Hankin, S.

    2003-05-01

    An investigation of the groundwater response to heavy rainfall at Lucas Heights Science and Technology Centre (LHSTC) is required under the conditions of Facility Licence F0001 for the ANSTO's Replacement Research Reactor. Groundwater continuous hydrograph monitoring has been used for this purpose. Hydrograph data from four boreholes are presented showing the rainfall recorded during the same period for comparison. The drought conditions have provided only limited cases where groundwater responded to a rainfall event. The characteristic response was local, caused by saturated soil contributing water directly to the borehole and the falling head as the water was redistributed into he aquifer in a few hours. Hydrograph data from borehole near the head of a gully showed that groundwater flow from the plateau to the gully produced a peak a fe days after the rainfall event and that the water level returned to its original level after about 10 days. The hydrograph data are consistent with an imperfect multi-layer groundwater flow regime, developed from earlier seismic and geophysical data, with decreasing rate of flow in each layer due to decreasing hydraulic conductivity with depth. The contrast in hydraulic conductivity between the thin permeable soil layer and the low permeable sandstone forms an effective barrier to vertical flow

  8. Advances in heavy water reactors

    International Nuclear Information System (INIS)

    1994-03-01

    The current IAEA programme in advanced nuclear power technology promotes technical information exchange between Member States with major development programmes. The Technical Committee Meeting (TCM) on Advances in Heavy Water Reactors was organized by the IAEA in the framework of the activities of the International Working Group on Advanced Technologies for Water Cooled Reactors (IWGATWR) and hosted by the Atomic Energy of Canada Limited. Sixty-five participants from nine countries (Canada, Czech Republic, India, German, Japan, Republic of Korea, Pakistan, Romania and USA) and the IAEA attended the TCM. Thirty-four papers were presented and discussed in five sessions. A separate abstract was prepared for each of these papers. All recommendations which were addressed by the participants of the Technical Committee meeting to the IWGATWR have been submitted to the 5th IWGATWR meeting in September 1993. They were reviewed and used as input for the preparation of the IAEA programme in the area of advanced water cooled reactors. This TCM was mainly oriented towards advances in HWRs and on projects which are now in the design process and under discussion. Refs, figs and tabs

  9. Heavy flavour physics at LEP

    International Nuclear Information System (INIS)

    Kluit, P.M.

    1992-01-01

    In this lecture I summarize the LEP results on heavy flavour physics. The topics that are covered are mainly in the field of beauty physics and can be divided in: B physics at the Z resonance (Γsub(b anti b), Asub(b anti b) fb , χ), Beauty signals (B s , Λ b , J/ψ), B lifetime measurements (τ b , τ Bs , τ Λb , τ B+ , and τ B0 ). In the first part I discuss the measurements of the width Γsub(b anti b) and asymmetry Asub(b anti b) fb for the process Z →b anti b, and a determination of the average mixing parameter χ of the b quark. In the second part evidence for B s , Λ b , and J/ψ production in Z decays is shown. In the last part I summarize the measurements of the average b lifetime, and the lifetimes for charged and neutral B hadrons. (orig.)

  10. CEBPG transcription factor correlates with antioxidant and DNA repair genes in normal bronchial epithelial cells but not in individuals with bronchogenic carcinoma

    International Nuclear Information System (INIS)

    Mullins, D'Anna N; Crawford, Erin L; Khuder, Sadik A; Hernandez, Dawn-Alita; Yoon, Youngsook; Willey, James C

    2005-01-01

    Cigarette smoking is the primary cause of bronchogenic carcinoma (BC), yet only 10–15% of heavy smokers develop BC and it is likely that this variation in risk is, in part, genetically determined. We previously reported a set of antioxidant genes for which transcript abundance was lower in normal bronchial epithelial cells (NBEC) of BC individuals compared to non-BC individuals. In unpublished studies of the same NBEC samples, transcript abundance values for several DNA repair genes were correlated with these antioxidant genes. From these data, we hypothesized that antioxidant and DNA repair genes are co-regulated by one or more transcription factors and that inter-individual variation in expression and/or function of one or more of these transcription factors is responsible for inter-individual variation in risk for BC. The putative transcription factor recognition sites common to six of the antioxidant genes were identified through in silico DNA sequence analysis. The transcript abundance values of these transcription factors (n = 6) and an expanded group of antioxidant and DNA repair genes (n = 16) were measured simultaneously by quantitative PCR in NBEC of 24 non-BC and 25 BC individuals. CEBPG transcription factor was significantly (p < 0.01) correlated with eight of the antioxidant or DNA repair genes in non-BC individuals but not in BC individuals. In BC individuals the correlation with CEBPG was significantly (p < 0.01) lower than that of non-BC individuals for four of the genes (XRCC1, ERCC5, GSTP1, and SOD1) and the difference was nearly significant for GPX1. The only other transcription factor correlated with any of these five target genes in non-BC individuals was E2F1. E2F1 was correlated with GSTP1 among non-BC individuals, but in contrast to CEBPG, there was no significant difference in this correlation in non-BC individuals compared to BC individuals. We conclude that CEBPG is the transcription factor primarily responsible for regulating

  11. The "fourth dimension" of gene transcription.

    Science.gov (United States)

    O'Malley, Bert W

    2009-05-01

    The three dimensions of space provide our relationship to position on the earth, but the fourth dimension of time has an equally profound influence on our lives. Everything from light and sound to weather and biology operate on the principle of measurable temporal periodicity. Consequently, a wide variety of time clocks affect all aspects of our existence. The annual (and biannual) cycles of activity, metabolism, and mating, the monthly physiological clocks of women and men, and the 24-h diurnal rhythms of humans are prime examples. Should it be surprising to us that the fourth dimension also impinges upon gene expression and that the genome itself is regulated by the fastest running of all biological clocks? Recent evidence substantiates the existence of such a ubiquitin-dependent transcriptional clock that is based upon the activation and destruction of transcriptional coactivators.

  12. Deconstructing transcriptional heterogeneity in pluripotent stem cells

    Science.gov (United States)

    Shalek, Alex K.; Satija, Rahul; DaleyKeyser, AJay; Li, Hu; Zhang, Jin; Pardee, Keith; Gennert, David; Trombetta, John J.; Ferrante, Thomas C.; Regev, Aviv; Daley, George Q.; Collins, James J.

    2014-01-01

    SUMMARY Pluripotent stem cells (PSCs) are capable of dynamic interconversion between distinct substates, but the regulatory circuits specifying these states and enabling transitions between them are not well understood. We set out to characterize transcriptional heterogeneity in PSCs by single-cell expression profiling under different chemical and genetic perturbations. Signaling factors and developmental regulators show highly variable expression, with expression states for some variable genes heritable through multiple cell divisions. Expression variability and population heterogeneity can be influenced by perturbation of signaling pathways and chromatin regulators. Strikingly, either removal of mature miRNAs or pharmacologic blockage of signaling pathways drives PSCs into a low-noise ground state characterized by a reconfigured pluripotency network, enhanced self-renewal, and a distinct chromatin state, an effect mediated by opposing miRNA families acting on the c-myc / Lin28 / let-7 axis. These data illuminate the nature of transcriptional heterogeneity in PSCs. PMID:25471879

  13. Computational Investigations of Post-Transcriptional Regulation

    DEFF Research Database (Denmark)

    Rasmussen, Simon Horskjær

    and miRNA regulation was studied by cross-linking immunoprecipitation (CLIP) and RBP double knockdown experiments. A comprehensive analysis of 107 CLIP datasets of 49 RBPs demonstrated that RBPs modulate miRNA regulation. Results suggest it is mediated by RBP-binding hotspots that likely...... investigated using high-throughput data. Analysis of IMP RIP-seq, iCLIP and RNA-seq datasets identified transcripts associated with cytoplasmic IMP ribonucleoproteins. Many of these transcripts were functionally involved in actin cytoskeletal remodeling. Further analyses of this data permitted estimation...... of a bipartite motif, composed of an AU-rich and a CA-rich domain. In addition, a regulatory motif discovery method was developed and applied to identify motifs using differential expression data and CLIP-data in the above investigations. This thesis increased the understanding of the role of RBPs in mi...

  14. A Herpesviral Immediate Early Protein Promotes Transcription Elongation of Viral Transcripts.

    Science.gov (United States)

    Fox, Hannah L; Dembowski, Jill A; DeLuca, Neal A

    2017-06-13

    Herpes simplex virus 1 (HSV-1) genes are transcribed by cellular RNA polymerase II (RNA Pol II). While four viral immediate early proteins (ICP4, ICP0, ICP27, and ICP22) function in some capacity in viral transcription, the mechanism by which ICP22 functions remains unclear. We observed that the FACT complex (comprised of SSRP1 and Spt16) was relocalized in infected cells as a function of ICP22. ICP22 was also required for the association of FACT and the transcription elongation factors SPT5 and SPT6 with viral genomes. We further demonstrated that the FACT complex interacts with ICP22 throughout infection. We therefore hypothesized that ICP22 recruits cellular transcription elongation factors to viral genomes for efficient transcription elongation of viral genes. We reevaluated the phenotype of an ICP22 mutant virus by determining the abundance of all viral mRNAs throughout infection by transcriptome sequencing (RNA-seq). The accumulation of almost all viral mRNAs late in infection was reduced compared to the wild type, regardless of kinetic class. Using chromatin immunoprecipitation sequencing (ChIP-seq), we mapped the location of RNA Pol II on viral genes and found that RNA Pol II levels on the bodies of viral genes were reduced in the ICP22 mutant compared to wild-type virus. In contrast, the association of RNA Pol II with transcription start sites in the mutant was not reduced. Taken together, our results indicate that ICP22 plays a role in recruiting elongation factors like the FACT complex to the HSV-1 genome to allow for efficient viral transcription elongation late in viral infection and ultimately infectious virion production. IMPORTANCE HSV-1 interacts with many cellular proteins throughout productive infection. Here, we demonstrate the interaction of a viral protein, ICP22, with a subset of cellular proteins known to be involved in transcription elongation. We determined that ICP22 is required to recruit the FACT complex and other transcription

  15. Reconstructing transcriptional regulatory networks through genomics data

    OpenAIRE

    Sun, Ning; Zhao, Hongyu

    2009-01-01

    One central problem in biology is to understand how gene expression is regulated under different conditions. Microarray gene expression data and other high throughput data have made it possible to dissect transcriptional regulatory networks at the genomics level. Owing to the very large number of genes that need to be studied, the relatively small number of data sets available, the noise in the data and the different natures of the distinct data types, network inference presents great challen...

  16. NUR TRANSCRIPTION FACTORS IN STRESS AND ADDICTION

    Directory of Open Access Journals (Sweden)

    Danae eCampos-Melo

    2013-12-01

    Full Text Available The Nur transcription factors Nur77 (NGFI-B, NR4A1, Nurr1 (NR4A2 and Nor-1 (NR4A3 are a sub-family of orphan members of the nuclear receptor superfamily. These transcription factors are products of immediate early genes, whose expression is rapidly and transiently induced in the central nervous system by several types of stimuli. Nur factors are present throughout the hypothalamus-pituitary-adrenal axis where are prominently induced in response to stress. Drugs of abuse and stress also induce the expression of Nur factors in nuclei of the motivation/reward circuit of the brain, indicating their participation in the process of drug addiction and in non-hypothalamic responses to stress. Repeated use of addictive drugs and chronic stress induce long-lasting dysregulation of the brain motivation/reward circuit, due to reprogramming of gene expression and enduring alterations in neuronal function. Here, we review the data supporting that Nur transcription factors are key players in the molecular basis of the dysregulation of neuronal circuits involved in chronic stress and addiction.

  17. The transcriptional regulatory network of Mycobacterium tuberculosis.

    Directory of Open Access Journals (Sweden)

    Joaquín Sanz

    Full Text Available Under the perspectives of network science and systems biology, the characterization of transcriptional regulatory (TR networks beyond the context of model organisms offers a versatile tool whose potential remains yet mainly unexplored. In this work, we present an updated version of the TR network of Mycobacterium tuberculosis (M.tb, which incorporates newly characterized transcriptional regulations coming from 31 recent, different experimental works available in the literature. As a result of the incorporation of these data, the new network doubles the size of previous data collections, incorporating more than a third of the entire genome of the bacterium. We also present an exhaustive topological analysis of the new assembled network, focusing on the statistical characterization of motifs significances and the comparison with other model organisms. The expanded M.tb transcriptional regulatory network, considering its volume and completeness, constitutes an important resource for diverse tasks such as dynamic modeling of gene expression and signaling processes, computational reliability determination or protein function prediction, being the latter of particular relevance, given that the function of only a small percent of the proteins of M.tb is known.

  18. Evolution of transcriptional enhancers and animal diversity

    Science.gov (United States)

    Rubinstein, Marcelo; de Souza, Flávio S. J.

    2013-01-01

    Deciphering the genetic bases that drive animal diversity is one of the major challenges of modern biology. Although four decades ago it was proposed that animal evolution was mainly driven by changes in cis-regulatory DNA elements controlling gene expression rather than in protein-coding sequences, only now are powerful bioinformatics and experimental approaches available to accelerate studies into how the evolution of transcriptional enhancers contributes to novel forms and functions. In the introduction to this Theme Issue, we start by defining the general properties of transcriptional enhancers, such as modularity and the coexistence of tight sequence conservation with transcription factor-binding site shuffling as different mechanisms that maintain the enhancer grammar over evolutionary time. We discuss past and current methods used to identify cell-type-specific enhancers and provide examples of how enhancers originate de novo, change and are lost in particular lineages. We then focus in the central part of this Theme Issue on analysing examples of how the molecular evolution of enhancers may change form and function. Throughout this introduction, we present the main findings of the articles, reviews and perspectives contributed to this Theme Issue that together illustrate some of the great advances and current frontiers in the field. PMID:24218630

  19. Curated compendium of human transcriptional biomarker data.

    Science.gov (United States)

    Golightly, Nathan P; Bell, Avery; Bischoff, Anna I; Hollingsworth, Parker D; Piccolo, Stephen R

    2018-04-17

    One important use of genome-wide transcriptional profiles is to identify relationships between transcription levels and patient outcomes. These translational insights can guide the development of biomarkers for clinical application. Data from thousands of translational-biomarker studies have been deposited in public repositories, enabling reuse. However, data-reuse efforts require considerable time and expertise because transcriptional data are generated using heterogeneous profiling technologies, preprocessed using diverse normalization procedures, and annotated in non-standard ways. To address this problem, we curated 45 publicly available, translational-biomarker datasets from a variety of human diseases. To increase the data's utility, we reprocessed the raw expression data using a uniform computational pipeline, addressed quality-control problems, mapped the clinical annotations to a controlled vocabulary, and prepared consistently structured, analysis-ready data files. These data, along with scripts we used to prepare the data, are available in a public repository. We believe these data will be particularly useful to researchers seeking to perform benchmarking studies-for example, to compare and optimize machine-learning algorithms' ability to predict biomedical outcomes.

  20. The Mediator complex and transcription regulation

    Science.gov (United States)

    Poss, Zachary C.; Ebmeier, Christopher C.

    2013-01-01

    The Mediator complex is a multi-subunit assembly that appears to be required for regulating expression of most RNA polymerase II (pol II) transcripts, which include protein-coding and most non-coding RNA genes. Mediator and pol II function within the pre-initiation complex (PIC), which consists of Mediator, pol II, TFIIA, TFIIB, TFIID, TFIIE, TFIIF and TFIIH and is approximately 4.0 MDa in size. Mediator serves as a central scaffold within the PIC and helps regulate pol II activity in ways that remain poorly understood. Mediator is also generally targeted by sequence-specific, DNA-binding transcription factors (TFs) that work to control gene expression programs in response to developmental or environmental cues. At a basic level, Mediator functions by relaying signals from TFs directly to the pol II enzyme, thereby facilitating TF-dependent regulation of gene expression. Thus, Mediator is essential for converting biological inputs (communicated by TFs) to physiological responses (via changes in gene expression). In this review, we summarize an expansive body of research on the Mediator complex, with an emphasis on yeast and mammalian complexes. We focus on the basics that underlie Mediator function, such as its structure and subunit composition, and describe its broad regulatory influence on gene expression, ranging from chromatin architecture to transcription initiation and elongation, to mRNA processing. We also describe factors that influence Mediator structure and activity, including TFs, non-coding RNAs and the CDK8 module. PMID:24088064

  1. Adaptive evolution of transcription factor binding sites

    Directory of Open Access Journals (Sweden)

    Berg Johannes

    2004-10-01

    Full Text Available Abstract Background The regulation of a gene depends on the binding of transcription factors to specific sites located in the regulatory region of the gene. The generation of these binding sites and of cooperativity between them are essential building blocks in the evolution of complex regulatory networks. We study a theoretical model for the sequence evolution of binding sites by point mutations. The approach is based on biophysical models for the binding of transcription factors to DNA. Hence we derive empirically grounded fitness landscapes, which enter a population genetics model including mutations, genetic drift, and selection. Results We show that the selection for factor binding generically leads to specific correlations between nucleotide frequencies at different positions of a binding site. We demonstrate the possibility of rapid adaptive evolution generating a new binding site for a given transcription factor by point mutations. The evolutionary time required is estimated in terms of the neutral (background mutation rate, the selection coefficient, and the effective population size. Conclusions The efficiency of binding site formation is seen to depend on two joint conditions: the binding site motif must be short enough and the promoter region must be long enough. These constraints on promoter architecture are indeed seen in eukaryotic systems. Furthermore, we analyse the adaptive evolution of genetic switches and of signal integration through binding cooperativity between different sites. Experimental tests of this picture involving the statistics of polymorphisms and phylogenies of sites are discussed.

  2. Transcription initiation complex structures elucidate DNA opening.

    Science.gov (United States)

    Plaschka, C; Hantsche, M; Dienemann, C; Burzinski, C; Plitzko, J; Cramer, P

    2016-05-19

    Transcription of eukaryotic protein-coding genes begins with assembly of the RNA polymerase (Pol) II initiation complex and promoter DNA opening. Here we report cryo-electron microscopy (cryo-EM) structures of yeast initiation complexes containing closed and open DNA at resolutions of 8.8 Å and 3.6 Å, respectively. DNA is positioned and retained over the Pol II cleft by a network of interactions between the TATA-box-binding protein TBP and transcription factors TFIIA, TFIIB, TFIIE, and TFIIF. DNA opening occurs around the tip of the Pol II clamp and the TFIIE 'extended winged helix' domain, and can occur in the absence of TFIIH. Loading of the DNA template strand into the active centre may be facilitated by movements of obstructing protein elements triggered by allosteric binding of the TFIIE 'E-ribbon' domain. The results suggest a unified model for transcription initiation with a key event, the trapping of open promoter DNA by extended protein-protein and protein-DNA contacts.

  3. Transcription of tandemly repetitive DNA: functional roles.

    Science.gov (United States)

    Biscotti, Maria Assunta; Canapa, Adriana; Forconi, Mariko; Olmo, Ettore; Barucca, Marco

    2015-09-01

    A considerable fraction of the eukaryotic genome is made up of satellite DNA constituted of tandemly repeated sequences. These elements are mainly located at centromeres, pericentromeres, and telomeres and are major components of constitutive heterochromatin. Although originally satellite DNA was thought silent and inert, an increasing number of studies are providing evidence on its transcriptional activity supporting, on the contrary, an unexpected dynamicity. This review summarizes the multiple structural roles of satellite noncoding RNAs at chromosome level. Indeed, satellite noncoding RNAs play a role in the establishment of a heterochromatic state at centromere and telomere. These highly condensed structures are indispensable to preserve chromosome integrity and genome stability, preventing recombination events, and ensuring the correct chromosome pairing and segregation. Moreover, these RNA molecules seem to be involved also in maintaining centromere identity and in elongation, capping, and replication of telomere. Finally, the abnormal variation of centromeric and pericentromeric DNA transcription across major eukaryotic lineages in stress condition and disease has evidenced the critical role that these transcripts may play and the potentially dire consequences for the organism.

  4. Repetitive Elements in Mycoplasma hyopneumoniae Transcriptional Regulation.

    Directory of Open Access Journals (Sweden)

    Amanda Malvessi Cattani

    Full Text Available Transcriptional regulation, a multiple-step process, is still poorly understood in the important pig pathogen Mycoplasma hyopneumoniae. Basic motifs like promoters and terminators have already been described, but no other cis-regulatory elements have been found. DNA repeat sequences have been shown to be an interesting potential source of cis-regulatory elements. In this work, a genome-wide search for tandem and palindromic repetitive elements was performed in the intergenic regions of all coding sequences from M. hyopneumoniae strain 7448. Computational analysis demonstrated the presence of 144 tandem repeats and 1,171 palindromic elements. The DNA repeat sequences were distributed within the 5' upstream regions of 86% of transcriptional units of M. hyopneumoniae strain 7448. Comparative analysis between distinct repetitive sequences found in related mycoplasma genomes demonstrated different percentages of conservation among pathogenic and nonpathogenic strains. qPCR assays revealed differential expression among genes showing variable numbers of repetitive elements. In addition, repeats found in 206 genes already described to be differentially regulated under different culture conditions of M. hyopneumoniae strain 232 showed almost 80% conservation in relation to M. hyopneumoniae strain 7448 repeats. Altogether, these findings suggest a potential regulatory role of tandem and palindromic DNA repeats in the M. hyopneumoniae transcriptional profile.

  5. Repetitive Elements in Mycoplasma hyopneumoniae Transcriptional Regulation.

    Science.gov (United States)

    Cattani, Amanda Malvessi; Siqueira, Franciele Maboni; Guedes, Rafael Lucas Muniz; Schrank, Irene Silveira

    2016-01-01

    Transcriptional regulation, a multiple-step process, is still poorly understood in the important pig pathogen Mycoplasma hyopneumoniae. Basic motifs like promoters and terminators have already been described, but no other cis-regulatory elements have been found. DNA repeat sequences have been shown to be an interesting potential source of cis-regulatory elements. In this work, a genome-wide search for tandem and palindromic repetitive elements was performed in the intergenic regions of all coding sequences from M. hyopneumoniae strain 7448. Computational analysis demonstrated the presence of 144 tandem repeats and 1,171 palindromic elements. The DNA repeat sequences were distributed within the 5' upstream regions of 86% of transcriptional units of M. hyopneumoniae strain 7448. Comparative analysis between distinct repetitive sequences found in related mycoplasma genomes demonstrated different percentages of conservation among pathogenic and nonpathogenic strains. qPCR assays revealed differential expression among genes showing variable numbers of repetitive elements. In addition, repeats found in 206 genes already described to be differentially regulated under different culture conditions of M. hyopneumoniae strain 232 showed almost 80% conservation in relation to M. hyopneumoniae strain 7448 repeats. Altogether, these findings suggest a potential regulatory role of tandem and palindromic DNA repeats in the M. hyopneumoniae transcriptional profile.

  6. Modulation of transcription factors by curcumin.

    Science.gov (United States)

    Shishodia, Shishir; Singh, Tulika; Chaturvedi, Madan M

    2007-01-01

    Curcumin is the active ingredient of turmeric that has been consumed as a dietary spice for ages. Turmeric is widely used in traditional Indian medicine to cure biliary disorders, anorexia, cough, diabetic wounds, hepatic disorders, rheumatism, and sinusitis. Extensive investigation over the last five decades has indicated that curcumin reduces blood cholesterol, prevents low-density lipoprotein oxidation, inhibits platelet aggregation, suppresses thrombosis and myocardial infarction, suppresses symptoms associated with type II diabetes, rheumatoid arthritis, multiple sclerosis, and Alzheimer's disease, inhibits HIV replication, enhances wound healing, protects from liver injury, increases bile secretion, protects from cataract formation, and protects from pulmonary toxicity and fibrosis. Evidence indicates that the divergent effects of curcumin are dependent on its pleiotropic molecular effects. These include the regulation of signal transduction pathways and direct modulation of several enzymatic activities. Most of these signaling cascades lead to the activation of transcription factors. Curcumin has been found to modulate the activity of several key transcription factors and, in turn, the cellular expression profiles. Curcumin has been shown to elicit vital cellular responses such as cell cycle arrest, apoptosis, and differentiation by activating a cascade of molecular events. In this chapter, we briefly review the effects of curcumin on transcription factors NF-KB, AP-1, Egr-1, STATs, PPAR-gamma, beta-catenin, nrf2, EpRE, p53, CBP, and androgen receptor (AR) and AR-related cofactors giving major emphasis to the molecular mechanisms of its action.

  7. Fatty Acid–Regulated Transcription Factors in the Liver

    Science.gov (United States)

    Jump, Donald B.; Tripathy, Sasmita; Depner, Christopher M.

    2014-01-01

    Fatty acid regulation of hepatic gene transcription was first reported in the early 1990s. Several transcription factors have been identified as targets of fatty acid regulation. This regulation is achieved by direct fatty acid binding to the transcription factor or by indirect mechanisms where fatty acids regulate signaling pathways controlling the expression of transcription factors or the phosphorylation, ubiquitination, or proteolytic cleavage of the transcription factor. Although dietary fatty acids are well-established regulators of hepatic transcription factors, emerging evidence indicates that endogenously generated fatty acids are equally important in controlling transcription factors in the context of glucose and lipid homeostasis. Our first goal in this review is to provide an up-to-date examination of the molecular and metabolic bases of fatty acid regulation of key transcription factors controlling hepatic metabolism. Our second goal is to link these mechanisms to nonalcoholic fatty liver disease (NAFLD), a growing health concern in the obese population. PMID:23528177

  8. To Your Health: NLM update transcript - Gun safety strategies

    Science.gov (United States)

    ... transcript040918.html To Your Health: NLM update Transcript Gun safety strategies : 04/09/2018 To use the ... on weekly topics. An evidence-based, public health gun safety strategy that is consistent with second amendment ...

  9. Determination of specificity influencing residues for key transcription factor families

    DEFF Research Database (Denmark)

    Patel, Ronak Y.; Garde, Christian; Stormo, Gary D.

    2015-01-01

    Transcription factors (TFs) are major modulators of transcription and subsequent cellular processes. The binding of TFs to specific regulatory elements is governed by their specificity. Considering the gap between known TFs sequence and specificity, specificity prediction frameworks are highly de...

  10. Heavy water physical verification in power plants

    International Nuclear Information System (INIS)

    Morsy, S.; Schuricht, V.; Beetle, T.; Szabo, E.

    1986-01-01

    This paper is a report on the Agency experience in verifying heavy water inventories in power plants. The safeguards objectives and goals for such activities are defined in the paper. The heavy water is stratified according to the flow within the power plant, including upgraders. A safeguards scheme based on a combination of records auditing, comparing records and reports, and physical verification has been developed. This scheme has elevated the status of heavy water safeguards to a level comparable to nuclear material safeguards in bulk facilities. It leads to attribute and variable verification of the heavy water inventory in the different system components and in the store. The verification methods include volume and weight determination, sampling and analysis, non-destructive assay (NDA), and criticality check. The analysis of the different measurement methods and their limits of accuracy are discussed in the paper

  11. Phytoremediation of heavy metals: Recent techniques | Jadia ...

    African Journals Online (AJOL)

    microorganisms/biomass or live plants to clean polluted areas. Phytoremediation is an emerging technology for cleaning up contaminated sites, which is ... A brief review on phytoremediation of heavy metals and its effect on plants have been ...

  12. The theory of heavy flavour production

    Energy Technology Data Exchange (ETDEWEB)

    Ellis, R.K.

    1989-08-09

    The theory of heavy quark production in hadronic reactions is reviewed. Rates for the production of charm, bottom and top quarks at energies of current interest are presented. 34 refs., 19 figs., 2 tabs.

  13. Travelling cranes for heavy reactor component handling

    International Nuclear Information System (INIS)

    Champeil, M.

    1977-01-01

    Structure and operating machinery of two travelling cranes (600 t and 450 t) used in the Framatome factory for handling heavy reactor components are described. When coupled, these cranes can lift loads up to 1000 t [fr

  14. Two-dimensional confinement of heavy fermions

    International Nuclear Information System (INIS)

    Shishido, Hiroaki; Shibauchi, Takasada; Matsuda, Yuji; Terashima, Takahito

    2010-01-01

    Metallic systems with the strongest electron correlations are realized in certain rare-earth and actinide compounds whose physics are dominated by f-electrons. These materials are known as heavy fermions, so called because the effective mass of the conduction electrons is enhanced via correlation effects up to as much as several hundreds times the free electron mass. To date the electronic structure of all heavy-fermion compounds is essentially three-dimensional. Here we report on the first realization of a two-dimensional heavy-fermion system, where the dimensionality is adjusted in a controllable fashion by fabricating heterostructures using molecular beam epitaxy. The two-dimensional heavy fermion system displays striking deviations from the standard Fermi liquid low-temperature electronic properties. (author)

  15. Heavy flavor production in nuclear collisions

    CERN Document Server

    Armesto-Pérez, Nestor; Capella, A; Pajares, C; Salgado, C A

    2001-01-01

    Heavy flavor production off nuclei is studied in the small x/sub F/ region of the produced heavy system. Corrections to the usually employed perturbative QCD factorization formula are considered in the framework of the Glauber-Gribov model. Transition from low to high energies is taken into account by using finite energy cutting rules. The low energy limit of the obtained results coincides with the probabilistic formula usually employed for quarkonium absorption. At finite energies both rescattering of the heavy flavor and corrections to nucleon parton densities inside nuclei appear, the latter also affecting lepton pair production. It turns out that at asymptotic energies both open heavy flavor and quarkonium are equally absorbed. The numerical differences between the results obtained with the probabilistic formula and the exact one are <20% up to LHC energies, and ~1/2% at SPS energies. (18 refs).

  16. Atmospheric Heavy Metal Pollution - Development of Chronological ...

    Indian Academy of Sciences (India)

    Home; Journals; Resonance – Journal of Science Education; Volume 6; Issue 4. Atmospheric Heavy Metal Pollution - Development of Chronological Records and Geochemical Monitoring. Rohit Shrivastav. General Article Volume 6 Issue 4 April 2001 pp 62-68 ...

  17. Magnetic fluctuations and heavy electron superconductivity

    International Nuclear Information System (INIS)

    Norman, M.R.

    1988-01-01

    A magnetic fluctuation self-energy based on neutron scattering data is used to calculate mass renormalizations, and superconducting critical temperatures and order parameters, for various heavy electron metals

  18. Converting heavy oils into light oils, etc

    Energy Technology Data Exchange (ETDEWEB)

    Mony, H

    1915-12-22

    A process is described for transforming heavy oils obtained by the carbonization of lignites, peats, coals, shales into light oils, and also the heavy oils of mineral and vegetable origin, consisting of heating the heavy oils or tars in the presence of one or more solid substances or liquids suitably chosen to cause the distillation of the oils under atmospheric pressure at an appropriate temperature; solid and liquid substances which favor the production of light products under the influence of heat being added preferably to the oil to be treated before putting it in the retort and before heating, so that light oils are obtained by treatment of the heavy oils in a single operation.

  19. Heavy ion facility for radiation therapy

    International Nuclear Information System (INIS)

    Leemann, C.; Alonso, J.; Clark, D.; Grunder, H.; Hoyer, E.; Lou, K.; Staples, J.; Voelker, F.

    1977-03-01

    The accelerator requirements of particle radiation therapy are reviewed and a preliminary design of a heavy ion synchrotron for hospital installation is presented. Beam delivery systems and multi-treatment room arrangements are outlined

  20. QCD Effective Field Theories for Heavy Quarkonium

    International Nuclear Information System (INIS)

    Brambilla, Nora

    2006-01-01

    QCD nonrelativistic effective field theories (NREFT) are the modern and most suitable frame to describe heavy quarkonium properties. Here I summarize few relevant concepts and some of the interesting physical applications (spectrum, decays, production) of NREFT

  1. Bound state of heavy quarks and antiquarks

    International Nuclear Information System (INIS)

    Quigg, C.

    1979-09-01

    Properties of the charmonium and upsilon families of heavy mesons are reviewed within the framework of quarkonium quantum mechanics. The implications of current data are analyzed and projections are made for heavier quarkonium families. 72 references

  2. Spectrophotometric Determination Of Heavy Metals In Cosmetics

    African Journals Online (AJOL)

    ISSN 1597-6343. Spectrophotometric Determination Of Heavy Metals In Cosmetics ... analysed using atomic absorption spectrophotometer – coupled with a hydride ... presence of arsenic (As), mercury (Hg), cadmium (Cd) and lead. (Pb) in ...

  3. Heavy-ion mammography and breast cancer

    International Nuclear Information System (INIS)

    Fabrikant, J.I.; Tobias, C.A.; Capp, M.P.; Holley, W.R.; Woodruff, K.H.; Sickles, E.A.

    1980-01-01

    Heavy-ion radiography is a new diagnostic imaging technique developed in our laboratory that produces superior density resolution at low radiation doses. Heavy-ion mammography has now emerged as a low-dose, safe, reliable, noninvasive diagnostic radiological procedure that can quantitate and image very small differences in soft tissue densities in the breast tissues of patients with clinical breast disease. The improved density resolution of heavy-ion mammography over conventional X-ray mammography and breast xerography provides the potential of detecting small breast cancers of less than 1 cm diameter. The radiation dose to the breast from carbon-ion mammorgraphy is about 50 mrad or less, and can potentially be only a fraction of this level. The results of the present clinical trial in progress of heavy-ion mammography in 37 patients, thus far studied, are extremely encouraging, and warrant continued study for application to the early diagnosis of breast cancer in women

  4. ASSESSMENT OF HEAVY METALS POLLUTION OF SEDIMENTS ...

    African Journals Online (AJOL)

    Preferred Customer

    2011 Chemical Society of Ethiopia. ______ ... 2Department of Laboratory Technology, University of Cape Coast, Ghana. (Received June 23 ... industrial and urban wastes are inevitably discharged into water bodies and consequently, heavy.

  5. Anomalous magnetic moment with heavy virtual leptons

    Energy Technology Data Exchange (ETDEWEB)

    Kurz, Alexander [Karlsruher Institut fuer Technologie (Germany). Inst. fuer Theoretische Teilchenphysik; Deutsches Elektronen-Synchrotron (DESY), Zeuthen (Germany); Liu, Tao; Steinhauser, Matthias [Karlsruher Institut fuer Technologie (Germany). Inst. fuer Theoretische Teilchenphysik; Marquard, Peter [Deutsches Elektronen-Synchrotron (DESY), Zeuthen (Germany)

    2013-11-15

    We compute the contributions to the electron and muon anomalous magnetic moment induced by heavy leptons up to four-loop order. Asymptotic expansion is applied to obtain three analytic expansion terms which show rapid convergence.

  6. Heavy Particle Beams in Tumor Radiotherapy

    International Nuclear Information System (INIS)

    Ayad, M.

    1999-01-01

    Using heavy particles beam in the tumor radiotherapy is advantageous to the conventional radiation with photons and electrons. One of the advantages of the heavy charged particle is the energy deposition processes which give a well defined range in tissue, a Bragg peak of ionization in the depth-dose distribution and slow scattering, while the dose to the surrounding healthy tissue in the vicinity is minimized. These processes can show the relation between the heavy particle and the conventional radiation is illustrated with respect to the depth dose and the relative dose. The usage of neutrons (Thermal or epithermal) in therapy necessitates implementation of capture material leading to the production of heavy charged particles (a-particles) as a result of the nuclear interaction in between. Experimentally it is found that 80% of the absorbed dose is mainly due to the presence of capture material

  7. Historical aspects of heavy ion radiotherapy

    International Nuclear Information System (INIS)

    Raju, M.R.

    1995-01-01

    This paper presents historical developments of heavy-ion radiotherapy including discussion of HILAC and HIMAC and discussion of cooperation between Japan and the United States, along with personal reflections

  8. Phenomenological approaches of dissipative heavy ion collisions

    International Nuclear Information System (INIS)

    Ngo, C.

    1983-09-01

    These lectures describe the properties of dissipative heavy ion collisions observed in low bombarding energy heavy ion reactions. These dissipative collisions are of two different types: fusion and deep inelastic reactions. Their main experimental properties are described on selected examples. It is shown how it is possible to give a simple interpretation to the data. A large number of phenomenological models have been developped to understand dissipative heavy ion collisions. The most important are those describing the collision by classical mechanics and friction forces, the diffusion models, and transport theories which merge both preceding approaches. A special emphasis has been done on two phenomena observed in dissipative heavy ion collisions: charge equilibratium for which we can show the existence of quantum fluctuations, and fast fission which appears as an intermediate mechanism between deep inelastic reactions and compound nucleus formation [fr

  9. Heavy flavor baryons in hypercentral model

    Indian Academy of Sciences (India)

    periments have generated much interest in the spectroscopy of heavy flavor baryons ... the point of view of simple systems to study three-body problems. ..... One of the authors (PCV) acknowledges the financial support from the University.

  10. Lawrence Livermore Laboratory heavy ion fusion program

    International Nuclear Information System (INIS)

    Bangerter, R.O.; Lee, E.P.; Monsler, M.J.; Yu, S.S.

    1978-01-01

    Target design at LLL for heavy ion fusion power production is discussed, including target development and beam-target interaction. The energy conversion chamber design, which utilizes a liquid lithium blanket, is described. Ion beam transport theory is discussed

  11. Heavy water leak detection using diffusion sampler

    International Nuclear Information System (INIS)

    Joshi, M.L.; Hussain, S.A.

    1990-01-01

    In the Pressurrised Heavy Water Reactors (PHWRs) detection of the sources of heavy water leaks is importent both for the purpose of radiation hazard control as well as for the reduction of escape/loss of heavy water which, is an expensive nuclear material. This paper describes an application of tritium diffusion sampler for heavy water leak detection. The diffusion sampler comprises an usual tritium counting glass vial with a special orifice. The counting vial has water vapour, deficient in HTO concentration. The HTO present outside diffuses in the vial through the orifice, gets exchanged with water of the wet filter paper kept at the bottom and the moisture in the vial atmosphere which has HTO concentration lower than that outside. This results in continuation of net movement of HTO in the vial. The exchanged tritium is counted in liquid scintillation spectrometer. The method has a sensitivity of 10000 dpm/DAC-h. (author). 2 figs., 2 ta bs

  12. Design of heavy lift cargo aircraft

    Data.gov (United States)

    National Aeronautics and Space Administration — This is the bird of the skies of the future. The heavy lift cargo aircraft which is currently being developed by me has twice the payload capacity of an Antonov...

  13. Scattering and transfer reactions with heavy ions

    International Nuclear Information System (INIS)

    Hussein, M.S.

    From the elastic scattering analysis the input parameters are found for the inelastic scattering analysis and the transfer reactions of the heavy ion reactions. The main theme reported is the likeness and conection among these processes. (L.C.) [pt

  14. Proceedings of the heavy ion fusion workshop

    Energy Technology Data Exchange (ETDEWEB)

    Arnold, R C [ed.

    1978-01-01

    These proceedings contain reviews of current laboratory programs dealing with inertial fusion driven by beams of heavy ions, as well as several individually abstracted invited talks, workshop reports and contributed papers.

  15. Elastic and inelastic heavy ion scattering

    International Nuclear Information System (INIS)

    Toepffer, C.; University of the Witwatersrand, Johannesburg; Richter, A.

    1977-02-01

    In the field of elastic and inelastic heavy ion scattering, the following issues are dealt with: semiclassical descriptive approximations, optical potentials, barriers, critical radii and angular momenta, excitation functions and the application to superheavy ions and high energies. (WL) [de

  16. Heavy-Ion Fusion Accelerator Research, 1991

    International Nuclear Information System (INIS)

    1992-03-01

    This report discusses the following topics: research with multiple- beam experiment MBE-4; induction linac systems experiments; and long- range research and development of heavy-ion fusion accelerators

  17. The theory of heavy flavour production

    International Nuclear Information System (INIS)

    Ellis, R.K.

    1989-01-01

    The theory of heavy quark production in hadronic reactions is reviewed. Rates for the production of charm, bottom and top quarks at energies of current interest are presented. 34 refs., 19 figs., 2 tabs

  18. HEAVY METALS IN VINEYARDS AND ORCHARD SOILS

    Directory of Open Access Journals (Sweden)

    GUSTAVO BRUNETTO

    Full Text Available ABSTRACT The application of foliar fungicides in vineyards and orchards can increase soil concentration of heavy metals such as copper (Cu and zinc (Zn, up to the toxicity threshold for fruit trees and cover crops. However, some agronomic practices, such as liming, addition of organic fertilizers, cultivation of soil cover crops and inoculation of young plants with arbuscular mycorrhizal fungi can decrease the availability and the potential of heavy metal toxicity to fruit trees. This review aims to compile and present information about the effects of increasing concentrations of heavy metals, especially Cu and Zn, on soils cultivated with fruit trees and provides some agronomic practices of remediation. Information about the sources of heavy metals found in soils cultivated with fruit trees are presented; mechanisms of absorption, transport, accumulation and potential toxicity to plants are described.

  19. Radiobiological comparison of pions and heavy ions

    International Nuclear Information System (INIS)

    Raju, M.R.

    1981-01-01

    The physical and radiobiological differences between some aspects of pions and heavy ions are discussed, followed by a discussion of acute and late effects of high LET radiations compared to low LET radiations

  20. The search for a heavy Higgs boson

    International Nuclear Information System (INIS)

    Dawson, S.

    1989-02-01

    Theoretical limits on the mass of the Higgs boson from vacuum stability and perturbative unitarity are examined. Search techniques for heavy Higgs bosons, M/sub H/ > 200 GeV, are also reviewed. 8 refs., 5 figs