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Sample records for habitat suitability index

  1. Habitat Suitability Index Models: Red-winged blackbird

    Science.gov (United States)

    Short, Henry L.

    1985-01-01

    A review and synthesis of existing information were used to develop a Habitat Suitability Index (HSI) model for the red-winged blackbird (Agelaius phoeniceus L.). The model consolidates habitat use information into a framework appropriate for field application, and is scaled to produce an index between 0.0 (unsuitable habitat) to 1.0 (optimum habitat). HSI models are designed to be used with Habitat Evaluation Procedures previously developed by the U.S. Fish and Wildlife Service.

  2. Habitat Suitability Index Models: Yellow-headed blackbird

    Science.gov (United States)

    Schroeder, Richard L.

    1982-01-01

    Habitat preferences of the yellow-headed blackbird (Xanthocephalus xanthocephalus) are described in this publication. It is one of a series of Habitat Suitability Index (HSI) models and was developed through an analysis of available infomration on the species-habitat requirements of the species. Habitat use information is presented in a review of the literature, followed by the development of an HSI model, designed for use in impact assessment and habitat management activities.

  3. Proceedings of a workshop on fish habitat suitability index models

    Science.gov (United States)

    Terrell, James W.

    1984-01-01

    One of the habitat-based methodologies for impact assessment currently in use by the U.S. Fish and Wildlife Service is the Habitat Evaluation Procedures (HEP) (U.S. Fish and Wildlife Service 1980). HEP is based on the assumption that the quality of an area as wildlife habitat at a specified target year can be described by a single number, called a Habitat Suitability Index (HSI). An HSI of 1.0 represents optimum habitat: an HSI of 0.0 represents unsuitable habitat. The verbal or mathematical rules by which an HSI is assigned to an area are called an HSI model. A series of Habitat Suitability Index (HSI) models, described by Schamberger et al. (1982), have been published to assist users in applying HEP. HSI model building approaches are described in U.S. Fish and Wildlife Service (1981). One type of HSI model described in detail requires the development of Suitability Index (SI) graphs for habitat variables believed to be important for the growth, survival, standing crop, or other measure of well-being for a species. Suitability indices range from 0 to 1.0, with 1.0 representing optimum conditions for the variable. When HSI models based on suitability indices are used, habitat variable values are measured, or estimated, and converted to SI's through the use of a Suitability Index graph for each variable. Individual SI's are aggregated into an HSI. Standard methods for testing this type of HSI model did not exist at the time the studies reported in this document were performed. A workshop was held in Fort Collins, Colorado, February 14-15, 1983, that brought together biologists experienced in the use, development, and testing of aquatic HSI models, in an effort to address the following objectives: (1) review the needs of HSI model users; (2) discuss and document the results of aquatic HSI model tests; and (3) provide recommendations for the future development, testing, modification, and use of HSI models. Individual presentations, group discussions, and group

  4. Quantitative validation of a habitat suitability index for oyster restoration

    Directory of Open Access Journals (Sweden)

    Seth eTheuerkauf

    2016-05-01

    Full Text Available Habitat suitability index (HSI models provide spatially explicit information on the capacity of a given habitat to support a species of interest, and their prevalence has increased dramatically in recent years. Despite caution that the reliability of HSIs must be validated using independent, quantitative data, most HSIs intended to inform terrestrial and marine species management remain unvalidated. Furthermore, of the eight HSI models developed for eastern oyster (Crassostrea virginica restoration and fishery production, none has been validated. Consequently, we developed, calibrated, and validated an HSI for the eastern oyster to identify optimal habitat for restoration in a tributary of Chesapeake Bay, the Great Wicomico River (GWR. The GWR harbors a high density, restored oyster population, and therefore serves as an excellent model system for assessing the validity of the HSI. The HSI was derived from GIS layers of bottom type, salinity, and water depth (surrogate for dissolved oxygen, and was tested using live adult oyster density data from a survey of high vertical relief reefs (HRR and low vertical relief reefs (LRR in the sanctuary network. Live adult oyster density was a statistically-significant sigmoid function of the HSI, which validates the HSI as a robust predictor of suitable oyster reef habitat for rehabilitation or restoration. In addition, HRR had on average 103-116 more adults m^−2 than LRR at a given level of the HSI. For HRR, HSI values ≥0.3 exceeded the accepted restoration target of 50 live adult oysters m^−2. For LRR, the HSI was generally able to predict live adult oyster densities that meet or exceed the target at HSI values ≥0.3. The HSI indicated that there remain large areas of suitable habitat for restoration in the GWR. This study provides a robust framework for HSI model development and validation, which can be refined and applied to other systems and previously developed HSIs to improve the efficacy of

  5. Guidelines for using the Delphi Technique to develop habitat suitability index curves

    Science.gov (United States)

    Crance, Johnie H.

    1987-01-01

    Habitat Suitability Index (SI) curves are one method of presenting species habitat suitability criteria. The curves are often used with the Habitat Evaluation Procedures (HEP) and are necessary components of the Instream Flow Incremental Methodology (IFIM) (Armour et al. 1984). Bovee (1986) described three categories of SI curves or habitat suitability criteria based on the procedures and data used to develop the criteria. Category I curves are based on professional judgment, with 1ittle or no empirical data. Both Category II (utilization criteria) and Category III (preference criteria) curves have as their source data collected at locations where target species are observed or collected. Having Category II and Category III curves for all species of concern would be ideal. In reality, no SI curves are available for many species, and SI curves that require intensive field sampling often cannot be developed under prevailing constraints on time and costs. One alternative under these circumstances is the development and interim use of SI curves based on expert opinion. The Delphi technique (Pill 1971; Delbecq et al. 1975; Linstone and Turoff 1975) is one method used for combining the knowledge and opinions of a group of experts. The purpose of this report is to describe how the Delphi technique may be used to develop expert-opinion-based SI curves.

  6. Evaluation of habitat suitability models for forest passerines using demographic data

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    Chadwick D. Rittenhouse; Frank R., III Thompson; William D. Dijak; Joshua J. Millspaugh; Richard L. Clawson

    2010-01-01

    Habitat suitability is often used as a surrogate for demographic responses (i.e., abundance, survival, fecundity, or population viability) in the application of habitat suitability index (HSI) models. Whether habitat suitability actually relates to demographics, however, has rarely been evaluated. We validated HSI models of breeding habitat suitability for wood thrush...

  7. Habitat suitability index model of the sea cucumber Apostichopus japonicus (Selenka): A case study of Shandong Peninsula, China.

    Science.gov (United States)

    Zhang, Zhipeng; Zhou, Jian; Song, Jingjing; Wang, Qixiang; Liu, Hongjun; Tang, Xuexi

    2017-09-15

    A habitat suitability index (HSI) model for the sea cucumber Apostichopus japonicus (Selenka) was established in the present study. Based on geographic information systems, the HSI model was used to identify potential sites around the Shandong Peninsula suitable for restoration of immature (25g) A. japonicus. Six habitat factors were used as input variables for the HSI model: sediment classification, water temperature, salinity, water depth, pH and dissolved oxygen. The weighting of each habitat factor was defined through the Delphi method. Sediment classification was the most important condition affecting the HSI of A. japonicus in the different study areas, while water temperature was the most important condition in different seasons. The HSI of Western Laizhou Bay was relatively low, meaning the site was not suitable for aquaculture-based restoration of A. japonicus. In contrast, Xiaoheishan Island, Rongcheng Bay and Qingdao were preferable sites, suitable as habitats for restoration efforts. Copyright © 2017 Elsevier Ltd. All rights reserved.

  8. Predicting the effects of proposed Mississippi River diversions on oyster habitat quality; application of an oyster habitat suitability index model

    Science.gov (United States)

    Soniat, Thomas M.; Conzelmann, Craig P.; Byrd, Jason D.; Roszell, Dustin P.; Bridevaux, Joshua L.; Suir, Kevin J.; Colley, Susan B.

    2013-01-01

    In an attempt to decelerate the rate of coastal erosion and wetland loss, and protect human communities, the state of Louisiana developed its Comprehensive Master Plan for a Sustainable Coast. The master plan proposes a combination of restoration efforts including shoreline protection, marsh creation, sediment diversions, and ridge, barrier island, and hydrological restoration. Coastal restoration projects, particularly the large-scale diversions of fresh water from the Mississippi River, needed to supply sediment to an eroding coast potentially impact oyster populations and oyster habitat. An oyster habitat suitability index model is presented that evaluates the effects of a proposed sediment and freshwater diversion into Lower Breton Sound. Voluminous freshwater, needed to suspend and broadly distribute river sediment, will push optimal salinities for oysters seaward and beyond many of the existing reefs. Implementation and operation of the Lower Breton Sound diversion structure as proposed would render about 6,173 ha of hard bottom immediately east of the Mississippi River unsuitable for the sustained cultivation of oysters. If historical harvests are to be maintained in this region, a massive and unprecedented effort to relocate private leases and restore oyster bottoms would be required. Habitat suitability index model results indicate that the appropriate location for such efforts are to the east and north of the Mississippi River Gulf Outlet.

  9. Multiscale habitat suitability index models for priority landbirds in the Central Hardwoods and West Gulf Coastal Plain/Ouachitas Bird Conservation Regions

    Science.gov (United States)

    John M. Tirpak; D. Todd Jones-Farrand; Frank R., III Thompson; Daniel J. Twedt; William B., III Uihlein

    2009-01-01

    Habitat Suitability Index (HSI) models were developed to assess habitat quality for 40 priority bird species in the Central Hardwoods and West Gulf Coastal Plain/Ouachitas Bird Conservation Regions. The models incorporated both site and landscape environmental variables from one of six nationally consistent datasets. Potential habitat was first defined from unique...

  10. Modelling Fish Habitat Suitability in the Eastern English Channel. Application to community habitat level

    OpenAIRE

    Vaz, Sandrine; Carpentier, Andre; Loots, Christophe; Koubbi, Philippe

    2004-01-01

    Valuable marine habitats and living resources can be found in the Eastern English Channel and in 2003, a Franco-British Interreg IIIA project, ‘Eastern Channel Habitat Atlas for Marine Resource Management’ (CHARM), was initiated to support decision-making for management of essential fish habitats. Fish habitat corresponds to geographic areas within which ranges of environmental factors define the presence of a particular species. Habitat Suitability index (HSI) modelling was used to relate fi...

  11. A test of the habitat suitability model for Merriam's wild turkeys

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    Mark A. Rumble; Stanley H. Anderson

    1996-01-01

    An important research area regarding the wild turkey (Meleagris gallopavo) is development of sound habitat models. Habitat models provide standardized methods to quantify wild turkey habitat and stimulate new research hypotheses. Habitat suitability index (HSI) models show species-habitat relationships on a scale of O-l, with 1 being optimum. A...

  12. The areal extent of brown shrimp habitat suitability in Mobile Bay, Alabama, USA: Targeting vegetated habitat restoration

    Science.gov (United States)

    Smith, L.M.; Nestlerode, J.A.; Harwell, L.C.; Bourgeois, P.

    2010-01-01

    The availability of wetlands and shallow water habitats significantly influences Gulf of Mexico (GOM) penaeid shrimp fishery productivity. However, the GOM region has the highest rate of wetland loss in the USA. Protection and management of these vital GOM habitats are critical to sustainable shrimp fisheries. Brown shrimp (Farfantepenaeus aztecus) are a major component of GOM fisheries. We present an approach for estimating the areal extent of suitable habitat for post-larval and juvenile brown shrimp in Mobile Bay, Alabama, using an existing habitat suitability index model for the northern GOM calculated from probabilistic survey of water quality and sediment data, land cover data, and submerged aquatic vegetation coverages. This estuarine scale approach is intended to support targeted protection and restoration of these habitats. These analyses indicate that approximately 60% of the area of Mobile Bay is categorized as suitable to near optimal for post-larval and juvenile shrimp and 38% of the area is marginally to minimally suitable. We identify potential units within Mobile Bay for targeted restoration to improve habitat suitability. ?? 2010 Springer Science+Business Media B.V.

  13. Regional prediction of basin-scale brown trout habitat suitability

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    S. Ceola

    2014-09-01

    Full Text Available In this study we propose a novel method for the estimation of ecological indices describing the habitat suitability of brown trout (Salmo trutta. Traditional hydrological tools are coupled with an innovative regional geostatistical technique, aiming at the prediction of the brown trout habitat suitability index where partial or totally ungauged conditions occur. Several methods for the assessment of ecological indices are already proposed in the scientific literature, but the possibility of exploiting a geostatistical prediction model, such as Topological Kriging, has never been investigated before. In order to develop a regional habitat suitability model we use the habitat suitability curve, obtained from measured data of brown trout adult individuals collected in several river basins across the USA. The Top-kriging prediction model is then employed to assess the spatial correlation between upstream and downstream habitat suitability indices. The study area is the Metauro River basin, located in the central part of Italy (Marche region, for which both water depth and streamflow data were collected. The present analysis focuses on discharge values corresponding to the 0.1-, 0.5-, 0.9-empirical quantiles derived from flow-duration curves available for seven gauging stations located within the study area, for which three different suitability indices (i.e. ψ10, ψ50 and ψ90 are evaluated. The results of this preliminary analysis are encouraging showing Nash-Sutcliffe efficiencies equal to 0.52, 0.65, and 0.69, respectively.

  14. Regional prediction of basin-scale brown trout habitat suitability

    Science.gov (United States)

    Ceola, S.; Pugliese, A.

    2014-09-01

    In this study we propose a novel method for the estimation of ecological indices describing the habitat suitability of brown trout (Salmo trutta). Traditional hydrological tools are coupled with an innovative regional geostatistical technique, aiming at the prediction of the brown trout habitat suitability index where partial or totally ungauged conditions occur. Several methods for the assessment of ecological indices are already proposed in the scientific literature, but the possibility of exploiting a geostatistical prediction model, such as Topological Kriging, has never been investigated before. In order to develop a regional habitat suitability model we use the habitat suitability curve, obtained from measured data of brown trout adult individuals collected in several river basins across the USA. The Top-kriging prediction model is then employed to assess the spatial correlation between upstream and downstream habitat suitability indices. The study area is the Metauro River basin, located in the central part of Italy (Marche region), for which both water depth and streamflow data were collected. The present analysis focuses on discharge values corresponding to the 0.1-, 0.5-, 0.9-empirical quantiles derived from flow-duration curves available for seven gauging stations located within the study area, for which three different suitability indices (i.e. ψ10, ψ50 and ψ90) are evaluated. The results of this preliminary analysis are encouraging showing Nash-Sutcliffe efficiencies equal to 0.52, 0.65, and 0.69, respectively.

  15. Distribution and habitat suitability index model for the Andean catfish Astroblepus ubidiai (Pisces: Siluriformes in Ecuador

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    Luis A Vélez-Espino

    2006-06-01

    Full Text Available In conservation biology there is a basic need to determine habitat suitability and availability. Astroblepus ubidiai (Siluriforms, the only native fish in the highlands of Imbabura province in the Ecuadorian Andes, was abundant in the past in the Imbakucha watershed and adjacent drainages, but currently it is restricted to a few isolated refuges. Conservation actions are needed if this unique fish is to persist. A Habitat Suitability Index (HSI for the species has been developed in order to aid management decisions. In this HIS model biomass density (B was selected as a better indicator of habitat quality than either abundance or density. A population well-being index (PI was constructed with the combination of B and an indicator of fish health (proportion of fish in the population with parasites and deformities. Based in other models of benthic fish the habitat variables current velocity, flow, depth, width, cover, invertebrate composition, vegetation type, terrestrial vegetation, land use, substrate, temperature, pH, TDS, oxygen, altitude, and slope were included in the analysis. An anthropogenic perturbation index (H and a fragment isolation index (FII were developed and included as habitat variables as well. The HSI model was applied to refuges and a sample of 15 aquatic bodies without fish populations within the study region. From the sampled sites without A. ubidiai 26.6% presented low quality, and the remaining 73.3% had medium quality according to the HSI estimated. Good quality habitat for dispersal, escape or translocations is rare in the region. The low HSIs estimated in some of the refuges suggests that current populations are not settled in the most favorable habitat but in the habitat least favorable to the agents of decline. Rev. Biol. Trop. 54(2: 623-638. Epub 2006 Jun 01.Astroblepus ubidiai (Siluriformes, el único pez nativo de las alturas de Imbabura, en los Andes Ecuatorianos, era un recurso abundante en el pasado

  16. A Bayesian spawning habitat suitability model for American shad in southeastern United States rivers

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    Hightower, Joseph E.; Harris, Julianne E.; Raabe, Joshua K.; Brownell, Prescott; Drew, C. Ashton

    2012-01-01

    Habitat suitability index models for American shad Alosa sapidissima were developed by Stier and Crance in 1985. These models, which were based on a combination of published information and expert opinion, are often used to make decisions about hydropower dam operations and fish passage. The purpose of this study was to develop updated habitat suitability index models for spawning American shad in the southeastern United States, building on the many field and laboratory studies completed since 1985. We surveyed biologists who had knowledge about American shad spawning grounds, assembled a panel of experts to discuss important habitat variables, and used raw data from published and unpublished studies to develop new habitat suitability curves. The updated curves are based on resource selection functions, which can model habitat selectivity based on use and availability of particular habitats. Using field data collected in eight rivers from Virginia to Florida (Mattaponi, Pamunkey, Roanoke, Tar, Neuse, Cape Fear, Pee Dee, St. Johns), we obtained new curves for temperature, current velocity, and depth that were generally similar to the original models. Our new suitability function for substrate was also similar to the original pattern, except that sand (optimal in the original model) has a very low estimated suitability. The Bayesian approach that we used to develop habitat suitability curves provides an objective framework for updating the model as new studies are completed and for testing the model's applicability in other parts of the species' range.

  17. Habitat suitability and nest survival of white-headed woodpeckers in unburned forests of Oregon

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    Hollenbeck, Jeff P.; Saab, Victoria A.; Frenzel, Richard W.

    2011-01-01

    We evaluated habitat suitability and nest survival of breeding white-headed woodpeckers (Picoides albolarvatus) in unburned forests of central Oregon, USA. Daily nest-survival rate was positively related to maximum daily temperature during the nest interval and to density of large-diameter trees surrounding the nest tree. We developed a niche-based habitat suitability model (partitioned Mahalanobis distance) for nesting white-headed woodpeckers using remotely sensed data. Along with low elevation, high density of large trees, and low slope, our habitat suitability model suggested that interspersion–juxtaposition of low- and high-canopy cover ponderosa pine (Pinus ponderosa) patches was important for nest-site suitability. Cross-validation suggested the model performed adequately for management planning at a scale >1 ha. Evaluation of mapped habitat suitability index (HSI) suggested that the maximum predictive gain (HSI = 0.36), where the number of nest locations are maximized in the smallest proportion of the modeled landscape, provided an objective initial threshold for identification of suitable habitat. However, managers can choose the threshold HSI most appropriate for their purposes (e.g., locating regions of low–moderate suitability that have potential for habitat restoration). Consequently, our habitat suitability model may be useful for managing dry coniferous forests for white-headed woodpeckers in central Oregon; however, model validation is necessary before our model could be applied to other locations.

  18. A habitat suitability model for Chinese sturgeon determined using the generalized additive method

    Science.gov (United States)

    Yi, Yujun; Sun, Jie; Zhang, Shanghong

    2016-03-01

    The Chinese sturgeon is a type of large anadromous fish that migrates between the ocean and rivers. Because of the construction of dams, this sturgeon's migration path has been cut off, and this species currently is on the verge of extinction. Simulating suitable environmental conditions for spawning followed by repairing or rebuilding its spawning grounds are effective ways to protect this species. Various habitat suitability models based on expert knowledge have been used to evaluate the suitability of spawning habitat. In this study, a two-dimensional hydraulic simulation is used to inform a habitat suitability model based on the generalized additive method (GAM). The GAM is based on real data. The values of water depth and velocity are calculated first via the hydrodynamic model and later applied in the GAM. The final habitat suitability model is validated using the catch per unit effort (CPUEd) data of 1999 and 2003. The model results show that a velocity of 1.06-1.56 m/s and a depth of 13.33-20.33 m are highly suitable ranges for the Chinese sturgeon to spawn. The hydraulic habitat suitability indexes (HHSI) for seven discharges (4000; 9000; 12,000; 16,000; 20,000; 30,000; and 40,000 m3/s) are calculated to evaluate integrated habitat suitability. The results show that the integrated habitat suitability reaches its highest value at a discharge of 16,000 m3/s. This study is the first to apply a GAM to evaluate the suitability of spawning grounds for the Chinese sturgeon. The study provides a reference for the identification of potential spawning grounds in the entire basin.

  19. An Improved Neural Network for Regional Giant Panda Habitat Suitability Mapping: A Case Study in Ya’an Prefecture

    Directory of Open Access Journals (Sweden)

    Jingwei Song

    2014-06-01

    Full Text Available Expert knowledge is a combination of prior information and subjective opinions based on long-experience; as such it is often not sufficiently objective to produce convincing results in animal habitat suitability index mapping. In this study, an animal habitat assessment method based on a learning neural network is proposed to reduce the level of subjectivity in animal habitat assessments. Based on two hypotheses, this method substitutes habitat suitability index with apparent density and has advantages over conventional ones such as those based on analytical hierarchy process or multivariate regression approaches. Besides, this method is integrated with a learning neural network and is suitable for building non-linear transferring functions to fit complex relationships between multiple factors influencing habitat suitability. Once the neural network is properly trained, new earth observation data can be integrated for rapid habitat suitability monitoring which could save time and resources needed for traditional data collecting approaches through extensive field surveys. Giant panda (Ailuropoda melanoleuca natural habitat in Ya’an prefecture and corresponding landsat images, DEM and ground observations are tested for validity of using the methodology reported. Results show that the method scores well in key efficiency and performance indicators and could be extended for habitat assessments, particularly of other large, rare and widely distributed animal species.

  20. Habitat suitability modeling for the endangered Hawaiian petrel on Kauai and analysis of predicted habitat overlap with the Newell’s shearwater

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    Jeff R. Troy

    2017-10-01

    Full Text Available The endangered Hawaiian petrel (Pterodroma sandwichensis is endemic to the main Hawaiian Islands and has undergone a breeding range contraction since the arrival of humans. Using abiotic and biotic environmental variables, we developed a terrestrial habitat suitability model for the species on the island of Kauai based on contemporary sites where the species is known (or strongly suspected to nest, as well as a habitat/threat-isolation index that combined predictions from this suitability model with spatial information on two anthropogenic threats to the species. After accounting for large-scale relative spatial positioning of sites in modeling procedures, the habitat suitability model suggests that the probability that a location on Kauai could be suitable for Hawaiian petrel nesting activity increases with increasing mean annual wind speed, and may also increase somewhat with increasing slope and native vegetation cover. The habitat suitability model (which does not incorporate spatial information on anthropogenic threats to the species predicts approximately 74 km2 of Kauai, mostly in the interior of the island, as being potentially suitable with predicted probability > 0.7 for Hawaiian petrel terrestrial activity, and about 35 km2 with predicted probability > 0.9. Encouragingly, almost 50 km2 of land with predicted probability > 0.7 and almost 24 km2 with predicted probability > 0.9 is currently protected, being located on either government or private reserve land. Based on the habitat/threat-isolation index, most land predicted to be both suitable (based on environmental variables and as isolated from threats as a large number of the known contemporary Hawaiian petrel sites, is found in government and private reserves. Some degree of predicted habitat overlap between the Hawaiian petrel and Newell’s shearwater (Puffinus newelli, another Hawaiian seabird of conservation concern, suggests that some of the same larger tracts of land

  1. Transferability of habitat suitability criteria for fishes in warmwater streams

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    Freeman, Mary C.; Bowen, Z.H.; Crance, J.H.

    1997-01-01

    We developed habitat suitability criteria and tested their transferability for nine fishes inhabiting unregulated Piedmont and Coastal Plain streams in Alabama. Cr iteria for optimal habitat were defined as ranges of depth, velocity, substrate type and cover type for which a species' suitability index (proportional abundance divided by proportional habitat availability, scaled from 0 to 1) equalled or exceeded 0.4. We evaluated the transferability of criteria between study sites by testing the null hypothesis that species occurrence in a sample was independent of whether or not the sample was taken in optimal habitat. We also tested criteria transference to a large, flow-regulated river sampled during low flow periods. Depth, velocity and most substrate criteria developed for the bronze darter Percina palmaris successfully transferred between unregulated streams and to the flow-regulated river samples. All criteria developed for a pair of closely related, allopatric darter species, Etheostoma chuckwachattee and E. jordani, transferred sucessfully when applied between species (in the unregulated sites) and to the regulated river samples. In contrast, criteria for the Alabama shiner Cyprinella callistia failed nearly all tests of transferability. Criteria for E. stigmaeum, P. nigrofasciata, an undescribed Percina species, and a pair of related, allopatric Cyprinella species transferred inconsistently. The species with good criteria transference had high suitability indices for shallow depths, fast current velocities and coarse substrates, characteristic of riffle species. We suggest that microhabitat criteria for riffle fishes are more likely to provide a transferable measure of habitat quality than criteria for fishes that, although restricted to fluvial habitats, commonly occupy a variety of pool and riffle habitats.

  2. Integrating Larval Dispersal, Permitting, and Logistical Factors Within a Validated Habitat Suitability Index for Oyster Restoration

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    Brandon J. Puckett

    2018-04-01

    Full Text Available Habitat suitability index (HSI models are increasingly used to guide ecological restoration. Successful restoration is a byproduct of several factors, including physical and biological processes, as well as permitting and logistical considerations. Rarely are factors from all of these categories included in HSI models, despite their combined relevance to common restoration goals such as population persistence. We developed a Geographic Information System (GIS-based HSI for restoring persistent high-relief subtidal oyster (Crassostrea virginica reefs protected from harvest (i.e., sanctuaries in Pamlico Sound, North Carolina, USA. Expert stakeholder input identified 17 factors to include in the HSI. Factors primarily represented physical (e.g., salinity and biological (e.g., larval dispersal processes relevant to oyster restoration, but also included several relevant permitting (e.g., presence of seagrasses and logistical (e.g., distance to restoration material stockpile sites considerations. We validated the model with multiple years of oyster density data from existing sanctuaries, and compared HSI output with distributions of oyster reefs from the late 1800's. Of the 17 factors included in the model, stakeholders identified four factors—salinity, larval export from existing oyster sanctuaries, larval import to existing sanctuaries, and dissolved oxygen—most critical to oyster sanctuary site selection. The HSI model provided a quantitative scale over which a vast water body (~6,000 km2 was narrowed down by 95% to a much smaller suite of optimal (top 1% HSI and suitable (top 5% HSI locations for oyster restoration. Optimal and suitable restoration locations were clustered in northeast and southwest Pamlico Sound. Oyster density in existing sanctuaries, normalized for time since reef restoration, was a positive exponential function of HSI, providing validation for the model. Only a small portion (10–20% of historical reef locations

  3. Hydrologic and water-quality rehabilitation of environments for suitable fish habitat

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    Zhao, C. S.; Yang, S. T.; Xiang, H.; Liu, C. M.; Zhang, H. T.; Yang, Z. L.; Zhang, Y.; Sun, Y.; Mitrovic, S. M.; Yu, Q.; Lim, R. P.

    2015-11-01

    Aquatic ecological rehabilitation is attracting increasing public and research attention, but without knowledge of the responses of aquatic species to their habitats the success of habitat restoration is uncertain. Thus efficient study of species response to habitat, through which to prioritize the habitat factors influencing aquatic ecosystems, is highly important. However many current models have too high requirement for assemblage information and have great bias in results due to consideration of only the species' attribute of presence/absence, abundance or biomass, thus hindering the wider utility of these models. This paper, using fish as a case, presents a framework for identification of high-priority habitat factors based on the responses of aquatic species to their habitats, using presence/absence, abundance and biomass data. This framework consists of four newly developed sub-models aiming to determine weightings for the evaluation of species' contributions to their communities, to quantitatively calculate an integrated habitat suitability index for multi-species based on habitat factors, to assess the suitable probability of habitat factors and to assess the rehabilitation priority of habitat factors. The framework closely links hydrologic, physical and chemical habitat factors to fish assemblage attributes drawn from monitoring datasets on hydrology, water quality and fish assemblages at a total of 144 sites, where 5084 fish were sampled and tested. Breakpoint identification techniques based on curvature in cumulated dominance along with a newly developed weighting calculation model based on theory of mass systems were used to help identify the dominant fish, based on which the presence and abundance of multiple fish were normalized to estimate the integrated habitat suitability index along gradients of various factors, based on their variation with principal habitat factors. Then, the appropriate probability of every principal habitat factor was

  4. Managing Environmental Flows for Impounded Rivers in Semi-Arid Regions- A Habitat Suitability Index (HSI) Approach for the Assessment of River Habitat for Salmonid Populations

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    Pai, H.; Sivakumaran, K.; Villamizar, S. R.; Flanagan, J.; Guo, Q.; Harmon, T. C.

    2013-12-01

    Balancing ecosystem health in water-scarce, agriculturally dominated river basins remains a challenge. In dry water years, maintaining conditions for restored and sustained indigenous fish populations (a frequently used indicator for ecosystem health) is particularly challenging. Competing human demands include urban and agricultural water supplies, hydropower, and flood control. In many semi-arid regions, increasing drought intensity and frequency under future climate scenarios will combine with population increases to water scarcity. The goal of this work is to better understand how reservoir releases affect fish habitat and overall river aquatic ecosystem quality. Models integrating a diverse array of physical and biological processes and system state are used to forecast the river ecosystem response to changing drivers. We propose a distributed parameter-based Habitat Suitability Index (HSI) approach for assessing fish habitat quality. Our river ecosystem HSI maps are based on a combination of the following: (1) In situ data describing stream flow and water quality conditions; (2) Spatial observations, including surveyed cross-sections, aerial imagery and digital elevation maps (DEM) of the river and its riparian corridor; and (3) Simulated spatially distributed water depths, flow velocities, and temperatures estimated from 1D and 2D river flow and temperature models (HEC-RAS and CE-QUAL-W2, respectively). With respect to (2), image processing schemes are used to classify and map key habitat features, namely riparian edge and shallow underwater vegetation. HSI maps can be modified temporally to address specific life cycle requirements of indicator fish species. Results are presented for several reaches associated with the San Joaquin River Restoration Project, focusing on several components of the Chinook salmon life cycle. HSI maps and interpretations are presented in the context of a range of prescribed reservoir release hydrographs linked to California water

  5. An index of reservoir habitat impairment

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    Miranda, L.E.; Hunt, K.M.

    2011-01-01

    Fish habitat impairment resulting from natural and anthropogenic watershed and in-lake processes has in many cases reduced the ability of reservoirs to sustain native fish assemblages and fisheries quality. Rehabilitation of impaired reservoirs is hindered by the lack of a method suitable for scoring impairment status. To address this limitation, an index of reservoir habitat impairment (IRHI) was developed by merging 14 metrics descriptive of common impairment sources, with each metric scored from 0 (no impairment) to 5 (high impairment) by fisheries scientists with local knowledge. With a plausible range of 5 to 25, distribution of the IRHI scores ranged from 5 to 23 over 482 randomly selected reservoirs dispersed throughout the USA. The IRHI reflected five impairment factors including siltation, structural habitat, eutrophication, water regime, and aquatic plants. The factors were weakly related to key reservoir characteristics including reservoir area, depth, age, and usetype, suggesting that common reservoir descriptors are poor predictors of fish habitat impairment. The IRHI is rapid and inexpensive to calculate, provides an easily understood measure of the overall habitat impairment, allows comparison of reservoirs and therefore prioritization of restoration activities, and may be used to track restoration progress. The major limitation of the IRHI is its reliance on unstandardized professional judgment rather than standardized empirical measurements. ?? 2010 US Government.

  6. Climate Change, Northern Birds of Conservation Concern and Matching the Hotspots of Habitat Suitability with the Reserve Network

    Science.gov (United States)

    Virkkala, Raimo; Heikkinen, Risto K.; Fronzek, Stefan; Leikola, Niko

    2013-01-01

    National reserve networks are one of the most important means of species conservation, but their efficiency may be diminished due to the projected climatic changes. Using bioclimatic envelope models and spatial data on habitats and conservation areas, we studied how efficient the reserve network will be in preserving 100 forest, mire, marshland, and alpine bird species of conservation concern in Finland in 2051–2080 under three different climate scenarios. The occurrences of the studied bird species were related to the amount of habitat preferred by each species in the different boreal zones. We employed a novel integrated habitat suitability index that takes into account both the species’ probability of occurrence from the bioclimatic models and the availability of suitable habitat. Using this suitability index, the distribution of the topmost 5% suitability squares (“hotspots”) in the four bird species groups in the period 1971–2000 and under the three scenarios were compared with the location of reserves with the highest amounts of the four habitats to study the efficiency of the network. In species of mires, marshlands, and Arctic mountains, a high proportion of protected habitat was included in the 5% hotspots in the scenarios in 2051–2080, showing that protected areas cover a high proportion of occurrences of bird species. In contrast, in forests in the southern and middle boreal zones, only a small proportion of the protected habitat was included in the 5% hotspots, indicating that the efficiency of the protected area network will be insufficient for forest birds in the future. In the northern boreal zone, the efficiency of the reserve network in forests was highly dependent on the strength of climate change varying between the scenarios. Overall, there is no single solution to preserving biodiversity in a changing climate, but several future pathways should be considered. PMID:23700420

  7. Multi-criteria Decision Analysis to Model Ixodes ricinus Habitat Suitability.

    Science.gov (United States)

    Rousseau, Raphaël; McGrath, Guy; McMahon, Barry J; Vanwambeke, Sophie O

    2017-09-01

    Tick-borne diseases present a major threat to both human and livestock health throughout Europe. The risk of infection is directly related to the presence of its vector. Thereby it is important to know their distribution, which is strongly associated with environmental factors: the presence and availability of a suitable habitat, of a suitable climate and of hosts. The present study models the habitat suitability for Ixodes ricinus in Ireland, where data on tick distribution are scarce. Tick habitat suitability was estimated at a coarse scale (10 km) with a multi-criteria decision analysis (MCDA) method according to four different scenarios (depending on the variables used and on the weights granted to each of them). The western part of Ireland and the Wicklow mountains in the East were estimated to be the most suitable areas for I. ricinus in the island. There was a good level of agreement between results from the MCDA and recorded tick presence. The different scenarios did not affect the spatial outputs substantially. The current study suggests that tick habitat suitability can be mapped accurately at a coarse scale in a data-scarce context using knowledge-based methods. It can serve as a guideline for future countrywide sampling that would help to determine local risk of tick presence and refining knowledge on tick habitat suitability in Ireland.

  8. Elk habitat suitability map for North Carolina

    Science.gov (United States)

    Williams, Steven G.; Cobb, David T.; Collazo, Jaime A.

    2015-01-01

    Although eastern elk (Cervus elaphus canadensis) were extirpated from the eastern United States in the 19th century, they were successfully reintroduced in the North Carolina portion of the Great Smoky Mountains National Park in the early 2000s. The North Carolina Wildlife Resources Commission (NCWRC) is evaluating the prospect of reintroducing the species in other locations in the state to augment recreational opportunities. As a first step in the process, we created a state-wide elk habitat suitability map. We used medium-scale data sets and a two-component approach to iden- tify areas of high biological value for elk and exclude from consideration areas where elk-human conflicts were more likely. Habitats in the state were categorized as 66% unsuitable, 16.7% low, 17% medium, and <1% high suitability for elk. The coastal plain and Piedmont contained the most suitable habitat, but prospective reintroduction sites were largely excluded from consideration due to extensive agricultural activities and pervasiveness of secondary roads. We ranked 31 areas (≥ 500 km2) based on their suitability for reintroduction. The central region of the state contained the top five ranked areas. The Blue Ridge Mountains, where the extant population of elk occurs, was ranked 21st. Our work provides a benchmark for decision makers to evaluate potential consequences and trade-offs associated with the selection of prospective elk reintroduction sites.

  9. Global habitat suitability for framework-forming cold-water corals.

    Directory of Open Access Journals (Sweden)

    Andrew J Davies

    Full Text Available Predictive habitat models are increasingly being used by conservationists, researchers and governmental bodies to identify vulnerable ecosystems and species' distributions in areas that have not been sampled. However, in the deep sea, several limitations have restricted the widespread utilisation of this approach. These range from issues with the accuracy of species presences, the lack of reliable absence data and the limited spatial resolution of environmental factors known or thought to control deep-sea species' distributions. To address these problems, global habitat suitability models have been generated for five species of framework-forming scleractinian corals by taking the best available data and using a novel approach to generate high resolution maps of seafloor conditions. High-resolution global bathymetry was used to resample gridded data from sources such as World Ocean Atlas to produce continuous 30-arc second (∼1 km(2 global grids for environmental, chemical and physical data of the world's oceans. The increased area and resolution of the environmental variables resulted in a greater number of coral presence records being incorporated into habitat models and higher accuracy of model predictions. The most important factors in determining cold-water coral habitat suitability were depth, temperature, aragonite saturation state and salinity. Model outputs indicated the majority of suitable coral habitat is likely to occur on the continental shelves and slopes of the Atlantic, South Pacific and Indian Oceans. The North Pacific has very little suitable scleractinian coral habitat. Numerous small scale features (i.e., seamounts, which have not been sampled or identified as having a high probability of supporting cold-water coral habitat were identified in all ocean basins. Field validation of newly identified areas is needed to determine the accuracy of model results, assess the utility of modelling efforts to identify vulnerable marine

  10. Assessing range-wide habitat suitability for the Lesser Prairie-Chicken

    Science.gov (United States)

    Jarnevich, Catherine S.; Holcombe, Tracy R.; Grisham, Blake A.; Timmer, Jennifer M.; Boal, Clint W.; Butler, Matthew; Pitman, James C.; Kyle, Sean; Klute, David; Beauprez, Grant M.; Janus, Allan; Van Pelt, William E.

    2016-01-01

    Population declines of many wildlife species have been linked to habitat loss incurred through land-use change. Incorporation of conservation planning into development planning may mitigate these impacts. The threatened Lesser Prairie-Chicken (Tympanuchus pallidicinctus) is experiencing loss of native habitat and high levels of energy development across its multijurisdictional range. Our goal was to explore relationships of the species occurrence with landscape characteristics and anthropogenic effects influencing its distribution through evaluation of habitat suitability associated with one particular habitat usage, lekking. Lekking has been relatively well-surveyed, though not consistently, in all jurisdictions. All five states in which Lesser Prairie-Chickens occur cooperated in development of a Maxent habitat suitability model. We created two models, one with state as a factor and one without state. When state was included it was the most important predictor, followed by percent of land cover consisting of known or suspected used vegetation classes within a 5000 m area around a lek. Without state, land cover was the most important predictor of relative habitat suitability for leks. Among the anthropogenic predictors, landscape condition, a measure of human impact integrated across several factors, was most important, ranking third in importance without state. These results quantify the relative suitability of the landscape within the current occupied range of Lesser Prairie-Chickens. These models, combined with other landscape information, form the basis of a habitat assessment tool that can be used to guide siting of development projects and targeting of areas for conservation.

  11. Relative effects of road risk, habitat suitability, and connectivity on wildlife roadkills: the case of tawny owls (Strix aluco).

    Science.gov (United States)

    Santos, Sara M; Lourenço, Rui; Mira, António; Beja, Pedro

    2013-01-01

    Despite its importance for reducing wildlife-vehicle collisions, there is still incomplete understanding of factors responsible for high road mortality. In particular, few empirical studies examined the idea that spatial variation in roadkills is influenced by a complex interplay between road-related factors, and species-specific habitat quality and landscape connectivity. In this study we addressed this issue, using a 7-year dataset of tawny owl (Strix aluco) roadkills recorded along 37 km of road in southern Portugal. We used a multi-species roadkill index as a surrogate of intrinsic road risk, and we used a Maxent distribution model to estimate habitat suitability. Landscape connectivity was estimated from least-cost paths between tawny owl territories, using habitat suitability as a resistance surface. We defined 10 alternative scenarios to compute connectivity, based on variation in potential movement patterns according to territory quality and dispersal distance thresholds. Hierarchical partitioning of a regression model indicated that independent variation in tawny owl roadkills was explained primarily by the roadkill index (70.5%) and, to a much lesser extent, by landscape connectivity (26.2%), while habitat suitability had minor effects (3.3%). Analysis of connectivity scenarios suggested that owl roadkills were primarily related to short range movements (habitat quality and landscape connectivity are globally high for the study species. Nevertheless, the study supported the view that functional connectivity should be incorporated whenever possible in roadkill models, as it may greatly increase their power to predict the location of roadkill hotspots.

  12. Predicted deep-sea coral habitat suitability for the U.S. West coast.

    Directory of Open Access Journals (Sweden)

    John M Guinotte

    Full Text Available Regional scale habitat suitability models provide finer scale resolution and more focused predictions of where organisms may occur. Previous modelling approaches have focused primarily on local and/or global scales, while regional scale models have been relatively few. In this study, regional scale predictive habitat models are presented for deep-sea corals for the U.S. West Coast (California, Oregon and Washington. Model results are intended to aid in future research or mapping efforts and to assess potential coral habitat suitability both within and outside existing bottom trawl closures (i.e. Essential Fish Habitat (EFH and identify suitable habitat within U.S. National Marine Sanctuaries (NMS. Deep-sea coral habitat suitability was modelled at 500 m×500 m spatial resolution using a range of physical, chemical and environmental variables known or thought to influence the distribution of deep-sea corals. Using a spatial partitioning cross-validation approach, maximum entropy models identified slope, temperature, salinity and depth as important predictors for most deep-sea coral taxa. Large areas of highly suitable deep-sea coral habitat were predicted both within and outside of existing bottom trawl closures and NMS boundaries. Predicted habitat suitability over regional scales are not currently able to identify coral areas with pin point accuracy and probably overpredict actual coral distribution due to model limitations and unincorporated variables (i.e. data on distribution of hard substrate that are known to limit their distribution. Predicted habitat results should be used in conjunction with multibeam bathymetry, geological mapping and other tools to guide future research efforts to areas with the highest probability of harboring deep-sea corals. Field validation of predicted habitat is needed to quantify model accuracy, particularly in areas that have not been sampled.

  13. A habitat suitability model for Pacific oysters (Crassostrea gigas) in the Oosterschelde

    NARCIS (Netherlands)

    Schellekens, T.; Wijsman, J.W.M.; Brink, van den A.M.

    2012-01-01

    The modelled habitat suitability maps show a reasonable estimation of the suitability for oysters throughout the Delta and can be used to broadly indicate the consequences of the effect of climate change and infrastructural changes on the habitat suitability for oysters. The largest effect on the

  14. Temporal habitat suitability modeling of Caspian shad (Alosa spp. in the southern Caspian Sea

    Directory of Open Access Journals (Sweden)

    Ali Haghi Vayghan

    2015-11-01

    Full Text Available To comprehensively manage an ecosystem such as that of the Caspian Sea, the world’s largest lake, detailed knowledge of the habitat traits of the living organisms in the ecosystem is essential. The present study examined environmental variables and used the Habitat Suitability Index (HSI model to determine the most preferred seasonal habitat and optimal environmental range of Caspian shad (Alosa spp. The fish preferred deep waters with low levels of total organic matter and sea level anomaly in winter and productive areas with a high concentration of chlorophyll-a (Chla and relatively high benthos biomass in spring. The number per unit area (NPUA-based HSI model determined that the geometric mean model (GMM was the optimal model for defining a suitable habitat in winter. For spring, the arithmetic mean model (or GMM in the NPUA-based HSI model most accurately predicted preferred habitat for Caspian shad. The average NPUA in both seasons increased with the HSI; areas with an HSI of between 0.4 and 0.6 in spring and between 0.6 and 0.8 in winter had a high percentage of total catch. Areas with an HSI of more than 0.5 had over 91% and 63% of the total catch in spring and winter, respectively, demonstrating the reliability of the NPUA-based HSI model in predicting Caspian shad habitat. The present study shows that remotely sensed data plus depth are the most critical environmental variables in Caspian shad habitats and that Chla and SLA are the most critical remotely sensed parameters for near real-time prediction of Caspian shad habitat.

  15. Faecal corticosterone metabolite concentrations are not a good predictor of habitat suitability for common gartersnakes.

    Science.gov (United States)

    Halliday, William D; Gilmour, Kathleen M; Blouin-Demers, Gabriel

    2015-01-01

    Measuring habitat suitability is important in conservation and in wildlife management. Measuring the abundance or presence-absence of a species in various habitats is not sufficient to measure habitat suitability because these metrics can be poor predictors of population success. Therefore, having some measure of population success is essential in assessing habitat suitability, but estimating population success is difficult. Identifying suitable proxies for population success could thus be beneficial. We examined whether faecal corticosterone metabolite (fCM) concentrations could be used as a proxy for habitat suitability in common gartersnakes (Thamnophis sirtalis). We conducted a validation study and confirmed that fCM concentrations indeed reflect circulating corticosterone concentrations. We estimated abundance, reproductive output and growth rate of gartersnakes in field and in forest habitat and we also measured fCM concentrations of gartersnakes from these same habitats. Common gartersnakes were more abundant and had higher reproductive outputs and higher growth rates in field habitat than in forest habitat, but fCM concentrations did not differ between the same two habitats. Our results suggest either that fCM concentrations are not a useful metric of habitat suitability in common gartersnakes or that the difference in suitability between the two habitats was too small to induce changes in fCM concentrations. Incorporating fitness metrics in estimates of habitat suitability is important, but these metrics of fitness have to be sensitive enough to vary between habitats.

  16. Effect of spatial and temporal scales on habitat suitability modeling: A case study of Ommastrephes bartramii in the northwest pacific ocean

    Science.gov (United States)

    Gong, Caixia; Chen, Xinjun; Gao, Feng; Tian, Siquan

    2014-12-01

    Temporal and spatial scales play important roles in fishery ecology, and an inappropriate spatio-temporal scale may result in large errors in modeling fish distribution. The objective of this study is to evaluate the roles of spatio-temporal scales in habitat suitability modeling, with the western stock of winter-spring cohort of neon flying squid ( Ommastrephes bartramii) in the northwest Pacific Ocean as an example. In this study, the fishery-dependent data from the Chinese Mainland Squid Jigging Technical Group and sea surface temperature (SST) from remote sensing during August to October of 2003-2008 were used. We evaluated the differences in a habitat suitability index model resulting from aggregating data with 36 different spatial scales with a combination of three latitude scales (0.5°, 1° and 2°), four longitude scales (0.5°, 1°, 2° and 4°), and three temporal scales (week, fortnight, and month). The coefficients of variation (CV) of the weekly, biweekly and monthly suitability index (SI) were compared to determine which temporal and spatial scales of SI model are more precise. This study shows that the optimal temporal and spatial scales with the lowest CV are month, and 0.5° latitude and 0.5° longitude for O. bartramii in the northwest Pacific Ocean. This suitability index model developed with an optimal scale can be cost-effective in improving forecasting fishing ground and requires no excessive sampling efforts. We suggest that the uncertainty associated with spatial and temporal scales used in data aggregations needs to be considered in habitat suitability modeling.

  17. Mapping anuran habitat suitability to estimate effects of grassland and wetland conservation programs

    Science.gov (United States)

    Mushet, David M.; Euliss, Ned H.; Stockwell, Craig A.

    2012-01-01

    The conversion of the Northern Great Plains of North America to a landscape favoring agricultural commodity production has negatively impacted wildlife habitats. To offset impacts, conservation programs have been implemented by the U.S. Department of Agriculture and other agencies to restore grassland and wetland habitat components. To evaluate effects of these efforts on anuran habitats, we used call survey data and environmental data in ecological niche factor analyses implemented through the program Biomapper to quantify habitat suitability for five anuran species within a 196 km2 study area. Our amphibian call surveys identified Northern Leopard Frogs (Lithobates pipiens), Wood Frogs (Lithobates sylvaticus), Boreal Chorus Frogs (Pseudacris maculata), Great Plains Toads (Anaxyrus cognatus), and Woodhouse’s Toads (Anaxyrus woodhousii) occurring within the study area. Habitat suitability maps developed for each species revealed differing patterns of suitable habitat among species. The most significant findings of our mapping effort were 1) the influence of deep-water overwintering wetlands on suitable habitat for all species encountered except the Boreal Chorus Frog; 2) the lack of overlap between areas of core habitat for both the Northern Leopard Frog and Wood Frog compared to the core habitat for both toad species; and 3) the importance of conservation programs in providing grassland components of Northern Leopard Frog and Wood Frog habitat. The differences in habitats suitable for the five species we studied in the Northern Great Plains, i.e., their ecological niches, highlight the importance of utilizing an ecosystem based approach that considers the varying needs of multiple species in the development of amphibian conservation and management plans.

  18. Creating a Ruggedness Layer for Use in Habitat Suitability Modeling for Ikh Nart Nature Reserve, Mongolia

    Directory of Open Access Journals (Sweden)

    Nanette Bragin

    2013-12-01

    Full Text Available Spatially-explicit wildlife habitat models are increasingly used to study optimal habitat for species of conservation focus. A ruggedness layer, that summarizes aspect and slope, provides a useful tool for analyses conducted in a Geographic Information System (GIS, such as developing a habitat suitability index model to measure species habitat use. Ruggedness layers prove especially useful in areas where topography represents a key habitat component. We created a ruggedness layer for the Ikh Nart Nature Reserve and surrounding areas in northern Dornogobi Aimag (province, Mongolia. Using a 90 m Shuttle Radar Topography Mission (SRTM digital elevation model (DEM and ArcGIS 10 spatial analyst, we created 9 categories for ruggedness. When combined with other thematic layers such as vegetation, the ruggedness layer becomes a powerful tool for analyzing habitat use by individual animals. The results of such analyses may inform decision makers in protected area planning and conservation of endangered species.

  19. Habitat suitability and movement corridors of grey wolf (Canis lupus) in Northern Pakistan

    Science.gov (United States)

    Kabir, Muhammad; Hameed, Shoaib; Ali, Hussain; Bosso, Luciano; Din, Jaffar Ud; Bischof, Richard; Redpath, Steve

    2017-01-01

    Habitat suitability models are useful to understand species distribution and to guide management and conservation strategies. The grey wolf (Canis lupus) has been extirpated from most of its historic range in Pakistan primarily due to its impact on livestock and livelihoods. We used non-invasive survey data from camera traps and genetic sampling to develop a habitat suitability model for C. lupus in northern Pakistan and to explore the extent of connectivity among populations. We detected suitable habitat of grey wolf using a maximum entropy approach (Maxent ver. 3.4.0) and identified suitable movement corridors using the Circuitscape 4.0 tool. Our model showed high levels of predictive performances, as seen from the values of area under curve (0.971±0.002) and true skill statistics (0.886±0.021). The main predictors for habitat suitability for C. lupus were distances to road, mean temperature of the wettest quarter and distance to river. The model predicted ca. 23,129 km2 of suitable areas for wolf in Pakistan, with much of suitable habitat in remote and inaccessible areas that appeared to be well connected through vulnerable movement corridors. These movement corridors suggest that potentially the wolf range can expand in Pakistan’s Northern Areas. However, managing protected areas with stringent restrictions is challenging in northern Pakistan, in part due to heavy dependence of people on natural resources. The habitat suitability map provided by this study can inform future management strategies by helping authorities to identify key conservation areas. PMID:29121089

  20. An Expert-Based Assessment Model for Evaluating Habitat Suitability of Pond-Breeding Amphibians

    Directory of Open Access Journals (Sweden)

    Shin-Ruoh Juang

    2017-02-01

    Full Text Available Farm ponds are important habitats for amphibians, birds, and other wildlife. In Taiwan, artificial ponds were originally created on farmlands for irrigation purposes and the needs of the domestic water supply. Although pond creation is a typical farming practice, it also provides habitats for pond-breeding amphibians. Thus, it is essential to understand the current status of habitats and their vulnerability regarding urgent conservation needs for target species. Günther’s frog (Hylarana guentheri, a pond-breeding amphibian, has a high sensitivity towards surrounding environmental changes, and can be used as an indicator species to assess habitat suitability. The purpose of this study is to establish a systematic framework to assess the habitat suitability of pond-breeding amphibians by using Günther’s frog as a pilot-study species. First, we collected frog survey data from Chiayi, Taiwan, from winter 2013 to spring 2015, and investigated the present status of the environmental conditions around the ponds. Next, expert questionnaires and the fuzzy Delphi method were applied to establish the hierarchical evaluation criteria regarding the habitat suitability assessment. Four indicators: the aquatic environments of farm ponds; the terrestrial environments around ponds; landscape connectivity; and the conservation perceptions of the residents, were determined as first-layer factors in the assessment criteria, while ten other indicators were defined as second-layer factors. Based on the established assessment criteria, we performed in situ habitat suitability evaluations on 69 selected sites and surveyed the perceptions of the residents using questionnaires. Results revealed that 19% of locations were rich in frog species with a high habitat suitability. However, 67% of locations showed signs of habitat degradation, which may imply a higher need in practicing habitat improvement or restoration. The Kappa value was 0.6061, which indicated a high

  1. Comparing habitat suitability and connectivity modeling methods for conserving pronghorn migrations.

    Directory of Open Access Journals (Sweden)

    Erin E Poor

    Full Text Available Terrestrial long-distance migrations are declining globally: in North America, nearly 75% have been lost. Yet there has been limited research comparing habitat suitability and connectivity models to identify migration corridors across increasingly fragmented landscapes. Here we use pronghorn (Antilocapra americana migrations in prairie habitat to compare two types of models that identify habitat suitability: maximum entropy (Maxent and expert-based (Analytic Hierarchy Process. We used distance to wells, distance to water, NDVI, land cover, distance to roads, terrain shape and fence presence to parameterize the models. We then used the output of these models as cost surfaces to compare two common connectivity models, least-cost modeling (LCM and circuit theory. Using pronghorn movement data from spring and fall migrations, we identified potential migration corridors by combining each habitat suitability model with each connectivity model. The best performing model combination was Maxent with LCM corridors across both seasons. Maxent out-performed expert-based habitat suitability models for both spring and fall migrations. However, expert-based corridors can perform relatively well and are a cost-effective alternative if species location data are unavailable. Corridors created using LCM out-performed circuit theory, as measured by the number of pronghorn GPS locations present within the corridors. We suggest the use of a tiered approach using different corridor widths for prioritizing conservation and mitigation actions, such as fence removal or conservation easements.

  2. Comparing habitat suitability and connectivity modeling methods for conserving pronghorn migrations.

    Science.gov (United States)

    Poor, Erin E; Loucks, Colby; Jakes, Andrew; Urban, Dean L

    2012-01-01

    Terrestrial long-distance migrations are declining globally: in North America, nearly 75% have been lost. Yet there has been limited research comparing habitat suitability and connectivity models to identify migration corridors across increasingly fragmented landscapes. Here we use pronghorn (Antilocapra americana) migrations in prairie habitat to compare two types of models that identify habitat suitability: maximum entropy (Maxent) and expert-based (Analytic Hierarchy Process). We used distance to wells, distance to water, NDVI, land cover, distance to roads, terrain shape and fence presence to parameterize the models. We then used the output of these models as cost surfaces to compare two common connectivity models, least-cost modeling (LCM) and circuit theory. Using pronghorn movement data from spring and fall migrations, we identified potential migration corridors by combining each habitat suitability model with each connectivity model. The best performing model combination was Maxent with LCM corridors across both seasons. Maxent out-performed expert-based habitat suitability models for both spring and fall migrations. However, expert-based corridors can perform relatively well and are a cost-effective alternative if species location data are unavailable. Corridors created using LCM out-performed circuit theory, as measured by the number of pronghorn GPS locations present within the corridors. We suggest the use of a tiered approach using different corridor widths for prioritizing conservation and mitigation actions, such as fence removal or conservation easements.

  3. Predicting habitat suitability for rare plants at local spatial scales using a species distribution model.

    Science.gov (United States)

    Gogol-Prokurat, Melanie

    2011-01-01

    If species distribution models (SDMs) can rank habitat suitability at a local scale, they may be a valuable conservation planning tool for rare, patchily distributed species. This study assessed the ability of Maxent, an SDM reported to be appropriate for modeling rare species, to rank habitat suitability at a local scale for four edaphic endemic rare plants of gabbroic soils in El Dorado County, California, and examined the effects of grain size, spatial extent, and fine-grain environmental predictors on local-scale model accuracy. Models were developed using species occurrence data mapped on public lands and were evaluated using an independent data set of presence and absence locations on surrounding lands, mimicking a typical conservation-planning scenario that prioritizes potential habitat on unsurveyed lands surrounding known occurrences. Maxent produced models that were successful at discriminating between suitable and unsuitable habitat at the local scale for all four species, and predicted habitat suitability values were proportional to likelihood of occurrence or population abundance for three of four species. Unfortunately, models with the best discrimination (i.e., AUC) were not always the most useful for ranking habitat suitability. The use of independent test data showed metrics that were valuable for evaluating which variables and model choices (e.g., grain, extent) to use in guiding habitat prioritization for conservation of these species. A goodness-of-fit test was used to determine whether habitat suitability values ranked habitat suitability on a continuous scale. If they did not, a minimum acceptable error predicted area criterion was used to determine the threshold for classifying habitat as suitable or unsuitable. I found a trade-off between model extent and the use of fine-grain environmental variables: goodness of fit was improved at larger extents, and fine-grain environmental variables improved local-scale accuracy, but fine-grain variables

  4. Ecological variables governing habitat suitability and the distribution ...

    African Journals Online (AJOL)

    governed by soil particle size distribution), in combination with the cover provided by trees, as the two ecological factors that best explained habitat suitability for Juliana's golden mole at the three localities. An IndVal analysis failed to identify ...

  5. Spatial modelling of Lutzomyia (Nyssomyia whitmani s.l. (Antunes & Coutinho, 1939 (Diptera: Psychodidae: Phlebotominae habitat suitability in the state of Mato Grosso, Brazil

    Directory of Open Access Journals (Sweden)

    Peter Zeilhofer

    2008-11-01

    Full Text Available Lutzomyia (Nyssomyia whitmani s.l.is the main vector of cutaneous leishmaniasis in state of Mato Grosso, but little is known about environmental determinants of its spatial distribution on a regional scale. Entomologic surveys of this sand fly species, conducted between 1996 and 2001 in 41 state municipalities, were used to investigate the relationships between environmental factors and the presence of the species, and to develop a spatial model of habitat suitability. The relationship between averaged CDC light trap indexes and 15 environmental and socio-economic factors were tested by logistic regression (LR analysis. Spatial layers of deforestation tax and the Brazilian index of gross net production (IGNP were identified as significant explanatory variables for vector presence in the LR model, and these were then overlaid with habitat maps. The highest habitat suitability in 2001 was obtained for the heavily deforested areas in the Central-North, South, East, and Southwest of Mato Grosso, particularly in municipalities with lower IGNP values.

  6. A Restoration Suitability Index Model for the Eastern Oyster (Crassostrea virginica) in the Mission-Aransas Estuary, TX, USA

    Science.gov (United States)

    Beseres Pollack, Jennifer; Cleveland, Andrew; Palmer, Terence A.; Reisinger, Anthony S.; Montagna, Paul A.

    2012-01-01

    Oyster reefs are one of the most threatened marine habitats on earth, with habitat loss resulting from water quality degradation, coastal development, destructive fishing practices, overfishing, and storm impacts. For successful and sustainable oyster reef restoration efforts, it is necessary to choose sites that support long-term growth and survival of oysters. Selection of suitable sites is critically important as it can greatly influence mortality factors and may largely determine the ultimate success of the restoration project. The application of Geographic Information Systems (GIS) provides an effective methodology for identifying suitable sites for oyster reef restoration and removes much of the uncertainty involved in the sometimes trial and error selection process. This approach also provides an objective and quantitative tool for planning future oyster reef restoration efforts. The aim of this study was to develop a restoration suitability index model and reef quality index model to characterize locations based on their potential for successful reef restoration within the Mission-Aransas Estuary, Texas, USA. The restoration suitability index model focuses on salinity, temperature, turbidity, dissolved oxygen, and depth, while the reef quality index model focuses on abundance of live oysters, dead shell, and spat. Size-specific Perkinsus marinus infection levels were mapped to illustrate general disease trends. This application was effective in identifying suitable sites for oyster reef restoration, is flexible in its use, and provides a mechanism for considering alternative approaches. The end product is a practical decision-support tool that can be used by coastal resource managers to improve oyster restoration efforts. As oyster reef restoration activities continue at small and large-scales, site selection criteria are critical for assisting stakeholders and managers and for maximizing long-term sustainability of oyster resources. PMID:22792410

  7. Assessment of fine-scale resource selection and spatially explicit habitat suitability modelling for a re-introduced tiger (Panthera tigris) population in central India.

    Science.gov (United States)

    Sarkar, Mriganka Shekhar; Krishnamurthy, Ramesh; Johnson, Jeyaraj A; Sen, Subharanjan; Saha, Goutam Kumar

    2017-01-01

    Large carnivores influence ecosystem functions at various scales. Thus, their local extinction is not only a species-specific conservation concern, but also reflects on the overall habitat quality and ecosystem value. Species-habitat relationships at fine scale reflect the individuals' ability to procure resources and negotiate intraspecific competition. Such fine scale habitat choices are more pronounced in large carnivores such as tiger ( Panthera tigris ), which exhibits competitive exclusion in habitat and mate selection strategies. Although landscape level policies and conservation strategies are increasingly promoted for tiger conservation, specific management interventions require knowledge of the habitat correlates at fine scale. We studied nine radio-collared individuals of a successfully reintroduced tiger population in Panna Tiger Reserve, central India, focussing on the species-habitat relationship at fine scales. With 16 eco-geographical variables, we performed Manly's selection ratio and K-select analyses to define population-level and individual-level variation in resource selection, respectively. We analysed the data obtained during the exploratory period of six tigers and during the settled period of eight tigers separately, and compared the consequent results. We further used the settled period characteristics to model and map habitat suitability based on the Mahalanobis D 2 method and the Boyce index. There was a clear difference in habitat selection by tigers between the exploratory and the settled period. During the exploratory period, tigers selected dense canopy and bamboo forests, but also spent time near villages and relocated village sites. However, settled tigers predominantly selected bamboo forests in complex terrain, riverine forests and teak-mixed forest, and totally avoided human settlements and agriculture areas. There were individual variations in habitat selection between exploratory and settled periods. Based on threshold limits

  8. Identifying Farm Pond Habitat Suitability for the Common Moorhen (Gallinula chloropus: A Conservation-Perspective Approach

    Directory of Open Access Journals (Sweden)

    Chun-Hsien Lai

    2018-04-01

    Full Text Available The purpose of this study was to establish a habitat-suitability assessment model for Gallinula chloropus, or the Common Moorhen, to be applied to the selection of the most suitable farm pond for habitat conservation in Chiayi County, Taiwan. First, the fuzzy Delphi method was employed to evaluate habitat selection factors and calculate the weights of these factors. The results showed that the eight crucial factors, by importance, in descending order, were (1 area ratio of farmlands within 200 m of the farm pond; (2 pond area; (3 pond perimeter; (4 aquatic plant coverage of the pond surface; (5 drought period; (6 coverage of high and low shrubs around the pond bank; (7 bank type; and (8 water-surface-to-bank distance. Subsequently, field evaluations of 75 farm ponds in Chiayi County were performed. The results indicated that 15 farm ponds had highly-suitable habitats and were inhabited by unusually high numbers of Common Moorhens; these habitats were most in need of conservation. A total of two farm ponds were found to require habitat-environment improvements, and Common Moorhens with typical reproductive capacity could be appropriately introduced into 22 farm ponds to restore the ecosystem of the species. Additionally, the habitat suitability and number of Common Moorhens in 36 farm ponds were lower than average; these ponds could be used for agricultural irrigation, detention basins, or for recreational use by community residents. Finally, the total habitat suitability scores and occurrence of Common Moorhens in each farm pond were used to verify the accuracy of the habitat-suitability assessment model for the Common Moorhen. The overall accuracy was 0.8, and the Kappa value was 0.60, which indicates that the model established in this study exhibited high credibility. To sum up, this is an applicable framework not only to assess the habitat suitability of farm ponds for Common Moorhens, but also to determine whether a particular location may

  9. High Resolution Habitat Suitability Modelling For Restricted-Range Hawaiian Alpine Arthropod Species

    Science.gov (United States)

    Stephenson, N. M.

    2016-12-01

    Mapping potentially suitable habitat is critical for effective species conservation and management but can be challenging in areas exhibiting complex heterogeneity. An approach that combines non-intrusive spatial data collection techniques and field data can lead to a better understanding of landscapes and species distributions. Nysius wekiuicola, commonly known as the wēkiu bug, is the most studied arthropod species endemic to the Maunakea summit in Hawai`i, yet details about its geographic distribution and habitat use remain poorly understood. To predict the geographic distribution of N. wekiuicola, MaxEnt habitat suitability models were generated from a diverse set of input variables, including fifteen years of species occurrence data, high resolution digital elevation models, surface mineralogy maps derived from hyperspectral remote sensing, and climate data. Model results indicate that elevation (78.2 percent), and the presence of nanocrystalline hematite surface minerals (13.7 percent) had the highest influence, with lesser contributions from aspect, slope, and other surface mineral classes. Climatic variables were not included in the final analysis due to auto-correlation and coarse spatial resolution. Biotic factors relating to predation and competition also likely dictate wēkiu bug capture patterns and influence our results. The wēkiu bug range and habitat suitability models generated as a result of this study will be directly incorporated into management and restoration goals for the summit region and can also be adapted for other arthropod species present, leading to a more holistic understanding of metacommunity dynamics. Key words: Microhabitat, Structure from Motion, Lidar, MaxEnt, Habitat Suitability

  10. Modelling the spatial and seasonal distribution of suitable habitats of schistosomiasis intermediate host snails using Maxent in Ndumo area, KwaZulu-Natal Province, South Africa

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    Tawanda Manyangadze

    2016-11-01

    Full Text Available Abstract Background Schistosomiasis is a snail-borne disease endemic in sub-Saharan Africa transmitted by freshwater snails. The distribution of schistosomiasis coincides with that of the intermediate hosts as determined by climatic and environmental factors. The aim of this paper was to model the spatial and seasonal distribution of suitable habitats for Bulinus globosus and Biomphalaria pfeifferi snail species (intermediate hosts for Schistosoma haematobium and Schistosoma mansoni, respectively in the Ndumo area of uMkhanyakude district, South Africa. Methods Maximum Entropy (Maxent modelling technique was used to predict the distribution of suitable habitats for B. globosus and B. pfeifferi using presence-only datasets with ≥ 5 and ≤ 12 sampling points in different seasons. Precipitation, maximum and minimum temperatures, Normalised Difference Vegetation Index (NDVI, Normalised Difference Water Index (NDWI, pH, slope and Enhanced Vegetation Index (EVI were the background variables in the Maxent models. The models were validated using the area under the curve (AUC and omission rate. Results The predicted suitable habitats for intermediate snail hosts varied with seasons. The AUC for models in all seasons ranged from 0.71 to 1 and the prediction rates were between 0.8 and 0.9. Although B. globosus was found at more localities in the Ndumo area, there was also evidence of cohabiting with B. pfiefferi at some of the locations. NDWI had significant contribution to the models in all seasons. Conclusion The Maxent model is robust in snail habitat suitability modelling even with small dataset of presence-only sampling sites. Application of the methods and design used in this study may be useful in developing a control and management programme for schistosomiasis in the Ndumo area.

  11. Variability of Suitable Habitat of Western Winter-Spring Cohort for Neon Flying Squid in the Northwest Pacific under Anomalous Environments.

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    Wei Yu

    Full Text Available We developed a habitat suitability index (HSI model to evaluate the variability of suitable habitat for neon flying squid (Ommastrephes bartramii under anomalous environments in the Northwest Pacific Ocean. Commercial fisheries data from the Chinese squid-jigging vessels on the traditional fishing ground bounded by 35°-45°N and 150°-175°E from July to November during 1998-2009 were used for analyses, as well as the environmental variables including sea surface temperature (SST, chlorophyll-a (Chl-a concentration, sea surface height anomaly (SSHA and sea surface salinity (SSS. Two empirical HSI models (arithmetic mean model, AMM; geometric mean model, GMM were established according to the frequency distribution of fishing efforts. The AMM model was found to perform better than the GMM model. The AMM-based HSI model was further validated by the fishery and environmental data in 2010. The predicted HSI values in 1998 (high catch, 2008 (average catch and 2009 (low catch indicated that the squid habitat quality was strongly associated with the ENSO-induced variability in the oceanic conditions on the fishing ground. The La Niña events in 1998 tended to yield warm SST and favorable range of Chl-a concentration and SSHA, resulting in high-quality habitats for O. bartramii. While the fishing ground in the El Niño year of 2009 experienced anomalous cool waters and unfavorable range of Chl-a concentration and SSHA, leading to relatively low-quality squid habitats. Our findings suggest that the La Niña event in 1998 tended to result in more favorable habitats for O. bartramii in the Northwest Pacific with the gravity centers of fishing efforts falling within the defined suitable habitat and yielding high squid catch; whereas the El Niño event in 2009 yielded less favorable habitat areas with the fishing effort distribution mismatching the suitable habitat and a dramatic decline of the catch of O. bartramii. This study might provide some potentially

  12. Assessment of fine-scale resource selection and spatially explicit habitat suitability modelling for a re-introduced tiger (Panthera tigris population in central India

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    Mriganka Shekhar Sarkar

    2017-11-01

    Full Text Available Background Large carnivores influence ecosystem functions at various scales. Thus, their local extinction is not only a species-specific conservation concern, but also reflects on the overall habitat quality and ecosystem value. Species-habitat relationships at fine scale reflect the individuals’ ability to procure resources and negotiate intraspecific competition. Such fine scale habitat choices are more pronounced in large carnivores such as tiger (Panthera tigris, which exhibits competitive exclusion in habitat and mate selection strategies. Although landscape level policies and conservation strategies are increasingly promoted for tiger conservation, specific management interventions require knowledge of the habitat correlates at fine scale. Methods We studied nine radio-collared individuals of a successfully reintroduced tiger population in Panna Tiger Reserve, central India, focussing on the species-habitat relationship at fine scales. With 16 eco-geographical variables, we performed Manly’s selection ratio and K-select analyses to define population-level and individual-level variation in resource selection, respectively. We analysed the data obtained during the exploratory period of six tigers and during the settled period of eight tigers separately, and compared the consequent results. We further used the settled period characteristics to model and map habitat suitability based on the Mahalanobis D2 method and the Boyce index. Results There was a clear difference in habitat selection by tigers between the exploratory and the settled period. During the exploratory period, tigers selected dense canopy and bamboo forests, but also spent time near villages and relocated village sites. However, settled tigers predominantly selected bamboo forests in complex terrain, riverine forests and teak-mixed forest, and totally avoided human settlements and agriculture areas. There were individual variations in habitat selection between exploratory

  13. Assessing the Habitat Suitability of Dam Reservoirs: A Quantitative Model and Case Study of the Hantan River Dam, South Korea

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    Hyeongsik Kang

    2016-11-01

    Full Text Available The main objective of this study was to investigate ecologically healthy regions near a dam reservoir. This study developed a model for assessing habitat suitability as a proxy for the ecological value of reservoirs. Three main factors comprising nine assessment variables were selected and classified as having a habitat suitability (HS between 0 and 1: (1 geomorphic factors of altitude, slope steepness, and slope aspect; (2 vegetation factors of forest physiognomy, vegetation type, and tree age; and (3 ecological factors of land cover, ecological quality index, and environmental conservation value assessment. The spatial distribution of the nine HS indices was determined using geographic information systems and combined into one HS index value to determine ecologically healthy regions. The assessment model was applied to areas surrounding the Hantan River Dam, South Korea. To verify the model, wildlife location data from the national ecosystem survey of the Ministry of Environment were used. Areas with an HS index between 0.73 and 1 were found to contain 72% of observed wildlife locations. Ecologically healthy areas were identified by adding the indices of each variable. The methods shown here will be useful for establishing ecological restoration plans for dam reservoirs in South Korea.

  14. Flow Management to Control Excessive Growth of Macrophytes - An Assessment Based on Habitat Suitability Modeling.

    Science.gov (United States)

    Ochs, Konstantin; Rivaes, Rui P; Ferreira, Teresa; Egger, Gregory

    2018-01-01

    Mediterranean rivers in intensive agricultural watersheds usually display outgrowths of macrophytes - notably alien species - due to a combination of high concentrations of nutrients in the water runoff and low flows resulting from water abstraction for irrigation. Standard mechanical and chemical control is used to mitigate the problems associated with excessive growth of plant biomass: mainly less drainage capacity and higher flood risk. However, such control measures are cost and labor-intensive and do not present long-term efficiency. Although the high sensitivity of aquatic vegetation to instream hydraulic conditions is well known, management approaches based on flow management remain relatively unexplored. The aim of our study was therefore to apply physical habitat simulation techniques promoted by the Instream Flow Incremental Method (IFIM) to aquatic macrophytes - the first time it has been applied in this context - in order to model shifts in habitat suitability under different flow scenarios in the Sorraia river in central Portugal. We used this approach to test whether the risk of invasion and channel encroachment by nuisance species can be controlled by setting minimum annual flows. We used 960 randomly distributed survey points to analyze the habitat suitability for the most important aquatic species (including the invasive Brazilian milfoil Myriophyllum aquaticum , Sparganium erectum , and Potamogeton crispus ) in regard to the physical parameters 'flow velocity,' 'water depth,' and 'substrate size'. We chose the lowest discharge period of the year in order to assess the hydraulic conditions while disturbances were at a low-point, thus allowing aquatic vegetation establishment and subsistence. We then used the two-dimensional hydraulic River2D software to model the potential habitat availability for different flow conditions based on the site-specific habitat suitability index for each physical parameter and species. Our results show that the growth

  15. Spatial Heterogeneity of Habitat Suitability for Rift Valley Fever Occurrence in Tanzania: An Ecological Niche Modelling Approach

    Science.gov (United States)

    Sindato, Calvin; Stevens, Kim B.; Karimuribo, Esron D.; Mboera, Leonard E. G.; Paweska, Janusz T.; Pfeiffer, Dirk U.

    2016-01-01

    Background Despite the long history of Rift Valley fever (RVF) in Tanzania, extent of its suitable habitat in the country remains unclear. In this study we investigated potential effects of temperature, precipitation, elevation, soil type, livestock density, rainfall pattern, proximity to wild animals, protected areas and forest on the habitat suitability for RVF occurrence in Tanzania. Materials and Methods Presence-only records of 193 RVF outbreak locations from 1930 to 2007 together with potential predictor variables were used to model and map the suitable habitats for RVF occurrence using ecological niche modelling. Ground-truthing of the model outputs was conducted by comparing the levels of RVF virus specific antibodies in cattle, sheep and goats sampled from locations in Tanzania that presented different predicted habitat suitability values. Principal Findings Habitat suitability values for RVF occurrence were higher in the northern and central-eastern regions of Tanzania than the rest of the regions in the country. Soil type and precipitation of the wettest quarter contributed equally to habitat suitability (32.4% each), followed by livestock density (25.9%) and rainfall pattern (9.3%). Ground-truthing of model outputs revealed that the odds of an animal being seropositive for RVFV when sampled from areas predicted to be most suitable for RVF occurrence were twice the odds of an animal sampled from areas least suitable for RVF occurrence (95% CI: 1.43, 2.76, p < 0.001). Conclusion/Significance The regions in the northern and central-eastern Tanzania were more suitable for RVF occurrence than the rest of the regions in the country. The modelled suitable habitat is characterised by impermeable soils, moderate precipitation in the wettest quarter, high livestock density and a bimodal rainfall pattern. The findings of this study should provide guidance for the design of appropriate RVF surveillance, prevention and control strategies which target areas with

  16. Climate and air pollution impacts on habitat suitability of Austrian forest ecosystems.

    Science.gov (United States)

    Dirnböck, Thomas; Djukic, Ika; Kitzler, Barbara; Kobler, Johannes; Mol-Dijkstra, Janet P; Posch, Max; Reinds, Gert Jan; Schlutow, Angela; Starlinger, Franz; Wamelink, Wieger G W

    2017-01-01

    Climate change and excess deposition of airborne nitrogen (N) are among the main stressors to floristic biodiversity. One particular concern is the deterioration of valuable habitats such as those protected under the European Habitat Directive. In future, climate-driven shifts (and losses) in the species potential distribution, but also N driven nutrient enrichment may threaten these habitats. We applied a dynamic geochemical soil model (VSD+) together with a novel niche-based plant response model (PROPS) to 5 forest habitat types (18 forest sites) protected under the EU Directive in Austria. We assessed how future climate change and N deposition might affect habitat suitability, defined as the capacity of a site to host its typical plant species. Our evaluation indicates that climate change will be the main driver of a decrease in habitat suitability in the future in Austria. The expected climate change will increase the occurrence of thermophilic plant species while decreasing cold-tolerant species. In addition to these direct impacts, climate change scenarios caused an increase of the occurrence probability of oligotrophic species due to a higher N immobilisation in woody biomass leading to soil N depletion. As a consequence, climate change did offset eutrophication from N deposition, even when no further reduction in N emissions was assumed. Our results show that climate change may have positive side-effects in forest habitats when multiple drivers of change are considered.

  17. Ensemble modeling to predict habitat suitability for a large-scale disturbance specialist

    Science.gov (United States)

    Quresh S. Latif; Victoria A. Saab; Jonathan G. Dudley; Jeff P. Hollenbeck

    2013-01-01

    To conserve habitat for disturbance specialist species, ecologists must identify where individuals will likely settle in newly disturbed areas. Habitat suitability models can predict which sites at new disturbances will most likely attract specialists. Without validation data from newly disturbed areas, however, the best approach for maximizing predictive accuracy can...

  18. Ecological Flow Assessment to Improve the Spawning Habitat for the Four Major Species of Carp of the Yangtze River: A Study on Habitat Suitability Based on Ultrasonic Telemetry

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    Lixiong Yu

    2018-05-01

    Full Text Available Four major species of Chinese carp, namely black carp (Mylopharyngodon piceus, grass carp (Ctenopharyngodon idellus, silver carp (Hypophthalmichthys molitrix and bighead carp (Hypophthalmichthys nobilis, are important economic freshwater fish varieties in China. They primarily inhabit and breed in the Yangtze River. Unfortunately, the construction and operation of the Gezhouba Dam and the Three Gorges Dam have dramatically changed the hydrodynamic conditions in the middle reaches of the Yangtze River, leading to a sharp decline in the reproduction rates of these carp. The egg abundance of the four species of carp downstream from the Three Gorges Dam reached 8.35 billion in 1965, but abundance during 2005–2012 was only 0.25 billion. One of the main reasons was that the hydrodynamic conditions of the spawning ground could not meet the four species’ breeding requirements. However, due to the limitations of traditional detection tools, the spawning characteristics of these four species of carp were still unclear. In this study, the ultrasonic telemetry and a three–dimensional hydrodynamic model were utilized to build the habitat suitability index (HSI curves for the four species of carp. The habitat suitability model was then built based on HSI curves to assess spawning habitat quantity under different flow conditions. Finally, the habitat suitability model in the Yidu spawning ground was validated using 32 groups of sampling data in 2015 and 2017. The statistical results showed that the most suitable velocity ranged from 0.78 m/s to 0.93 m/s. The most suitable water depth ranged from 14.56 m to 16.35 m, and the most suitable Froude number ranged from 0.049 to 0.129. The habitat suitability model simulation results indicated that when the discharge was between 15,000 m3/s and 21,300 m3/s, the weighted usable area (WUA values in both the Yidu and Zhicheng spawning grounds would remain at a high level. The validation results showed that most

  19. Modeling mountain pine beetle habitat suitability within Sequoia National Park

    Science.gov (United States)

    Nguyen, Andrew

    Understanding significant changes in climate and their effects on timber resources can help forest managers make better decisions regarding the preservation of natural resources and land management. These changes may to alter natural ecosystems dependent on historical and current climate conditions. Increasing mountain pine beetle (MBP) outbreaks within the southern Sierra Nevada are the result of these alterations. This study better understands MPB behavior within Sequoia National Park (SNP) and model its current and future habitat distribution. Variables contributing to MPB spread are vegetation stress, soil moisture, temperature, precipitation, disturbance, and presence of Ponderosa (Pinus ponderosa) and Lodgepole (Pinus contorta) pine trees. These variables were obtained using various modeled, insitu, and remotely sensed sources. The generalized additive model (GAM) was used to calculate the statistical significance of each variable contributing to MPB spread and also created maps identifying habitat suitability. Results indicate vegetation stress and forest disturbance to be variables most indicative of MPB spread. Additionally, the model was able to detect habitat suitability of MPB with a 45% accuracy concluding that a geospatial driven modeling approach can be used to delineate potential MPB spread within SNP.

  20. Climate and air pollution impacts on habitat suitability of Austrian forest ecosystems

    Science.gov (United States)

    Djukic, Ika; Kitzler, Barbara; Kobler, Johannes; Mol-Dijkstra, Janet P.; Posch, Max; Reinds, Gert Jan; Schlutow, Angela; Starlinger, Franz; Wamelink, Wieger G. W.

    2017-01-01

    Climate change and excess deposition of airborne nitrogen (N) are among the main stressors to floristic biodiversity. One particular concern is the deterioration of valuable habitats such as those protected under the European Habitat Directive. In future, climate-driven shifts (and losses) in the species potential distribution, but also N driven nutrient enrichment may threaten these habitats. We applied a dynamic geochemical soil model (VSD+) together with a novel niche-based plant response model (PROPS) to 5 forest habitat types (18 forest sites) protected under the EU Directive in Austria. We assessed how future climate change and N deposition might affect habitat suitability, defined as the capacity of a site to host its typical plant species. Our evaluation indicates that climate change will be the main driver of a decrease in habitat suitability in the future in Austria. The expected climate change will increase the occurrence of thermophilic plant species while decreasing cold-tolerant species. In addition to these direct impacts, climate change scenarios caused an increase of the occurrence probability of oligotrophic species due to a higher N immobilisation in woody biomass leading to soil N depletion. As a consequence, climate change did offset eutrophication from N deposition, even when no further reduction in N emissions was assumed. Our results show that climate change may have positive side-effects in forest habitats when multiple drivers of change are considered. PMID:28898262

  1. Climate and air pollution impacts on habitat suitability of Austrian forest ecosystems.

    Directory of Open Access Journals (Sweden)

    Thomas Dirnböck

    Full Text Available Climate change and excess deposition of airborne nitrogen (N are among the main stressors to floristic biodiversity. One particular concern is the deterioration of valuable habitats such as those protected under the European Habitat Directive. In future, climate-driven shifts (and losses in the species potential distribution, but also N driven nutrient enrichment may threaten these habitats. We applied a dynamic geochemical soil model (VSD+ together with a novel niche-based plant response model (PROPS to 5 forest habitat types (18 forest sites protected under the EU Directive in Austria. We assessed how future climate change and N deposition might affect habitat suitability, defined as the capacity of a site to host its typical plant species. Our evaluation indicates that climate change will be the main driver of a decrease in habitat suitability in the future in Austria. The expected climate change will increase the occurrence of thermophilic plant species while decreasing cold-tolerant species. In addition to these direct impacts, climate change scenarios caused an increase of the occurrence probability of oligotrophic species due to a higher N immobilisation in woody biomass leading to soil N depletion. As a consequence, climate change did offset eutrophication from N deposition, even when no further reduction in N emissions was assumed. Our results show that climate change may have positive side-effects in forest habitats when multiple drivers of change are considered.

  2. Developing user-friendly habitat suitability tools from regional stream fish survey data

    Science.gov (United States)

    Zorn, T.G.; Seelbach, P.; Wiley, M.J.

    2011-01-01

    We developed user-friendly fish habitat suitability tools (plots) for fishery managers in Michigan; these tools are based on driving habitat variables and fish population estimates for several hundred stream sites throughout the state. We generated contour plots to show patterns in fish biomass for over 60 common species (and for 120 species grouped at the family level) in relation to axes of catchment area and low-flow yield (90% exceedance flow divided by catchment area) and also in relation to axes of mean and weekly range of July temperatures. The plots showed distinct patterns in fish habitat suitability at each level of biological organization studied and were useful for quantitatively comparing river sites. We demonstrate how these plots can be used to support stream management, and we provide examples pertaining to resource assessment, trout stocking, angling regulations, chemical reclamation of marginal trout streams, indicator species, instream flow protection, and habitat restoration. These straightforward and effective tools are electronically available so that managers can easily access and incorporate them into decision protocols and presentations.

  3. Flow Management to Control Excessive Growth of Macrophytes – An Assessment Based on Habitat Suitability Modeling

    Science.gov (United States)

    Ochs, Konstantin; Rivaes, Rui P.; Ferreira, Teresa; Egger, Gregory

    2018-01-01

    Mediterranean rivers in intensive agricultural watersheds usually display outgrowths of macrophytes – notably alien species – due to a combination of high concentrations of nutrients in the water runoff and low flows resulting from water abstraction for irrigation. Standard mechanical and chemical control is used to mitigate the problems associated with excessive growth of plant biomass: mainly less drainage capacity and higher flood risk. However, such control measures are cost and labor-intensive and do not present long-term efficiency. Although the high sensitivity of aquatic vegetation to instream hydraulic conditions is well known, management approaches based on flow management remain relatively unexplored. The aim of our study was therefore to apply physical habitat simulation techniques promoted by the Instream Flow Incremental Method (IFIM) to aquatic macrophytes – the first time it has been applied in this context – in order to model shifts in habitat suitability under different flow scenarios in the Sorraia river in central Portugal. We used this approach to test whether the risk of invasion and channel encroachment by nuisance species can be controlled by setting minimum annual flows. We used 960 randomly distributed survey points to analyze the habitat suitability for the most important aquatic species (including the invasive Brazilian milfoil Myriophyllum aquaticum, Sparganium erectum, and Potamogeton crispus) in regard to the physical parameters ‘flow velocity,’ ‘water depth,’ and ‘substrate size’. We chose the lowest discharge period of the year in order to assess the hydraulic conditions while disturbances were at a low-point, thus allowing aquatic vegetation establishment and subsistence. We then used the two-dimensional hydraulic River2D software to model the potential habitat availability for different flow conditions based on the site-specific habitat suitability index for each physical parameter and species. Our results show

  4. Evaluation of Limiting Climatic Factors and Simulation of a Climatically Suitable Habitat for Chinese Sea Buckthorn.

    Directory of Open Access Journals (Sweden)

    Guoqing Li

    Full Text Available Chinese sea buckthorn (Hippophae rhamnoides subsp. sinensis has considerable economic potential and plays an important role in reclamation and soil and water conservation. For scientific cultivation of this species across China, we identified the key climatic factors and explored climatically suitable habitat in order to maximize survival of Chinese sea buckthorn using MaxEnt and GIS tools, based on 98 occurrence records from herbarium and publications and 13 climatic factors from Bioclim, Holdridge life zone and Kria' index variables. Our simulation showed that the MaxEnt model performance was significantly better than random, with an average test AUC value of 0.93 with 10-fold cross validation. A jackknife test and the regularized gain change, which were applied to the training algorithm, showed that precipitation of the driest month (PDM, annual precipitation (AP, coldness index (CI and annual range of temperature (ART were the most influential climatic factors in limiting the distribution of Chinese sea buckthorn, which explained 70.1% of the variation. The predicted map showed that the core of climatically suitable habitat was distributed from the southwest to northwest of Gansu, Ningxia, Shaanxi and Shanxi provinces, where the most influential climate variables were PDM of 1.0-7.0 mm, AP of 344.0-1089.0 mm, CI of -47.7-0.0°C, and ART of 26.1-45.0°C. We conclude that the distribution patterns of Chinese sea buckthorn are related to the northwest winter monsoon, the southwest summer monsoon and the southeast summer monsoon systems in China.

  5. Predicted Habitat Suitability for Leptoseris in the Au'au Channel Region

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This raster denotes predicted habitat suitability for Leptoseris in the Au'au Channel region. Maximum Entropy (MaxEnt) modeling software was used to create this...

  6. Predicted Habitat Suitability for Porites in the Au'au Channel Region

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This raster denotes predicted habitat suitability for Porites in the Au'au Channel region. Maximum Entropy (MaxEnt) modeling software was used to create this...

  7. Future habitat suitability for coral reef ecosystems under global warming and ocean acidification.

    Science.gov (United States)

    Couce, Elena; Ridgwell, Andy; Hendy, Erica J

    2013-12-01

    Rising atmospheric CO2 concentrations are placing spatially divergent stresses on the world's tropical coral reefs through increasing ocean surface temperatures and ocean acidification. We show how these two stressors combine to alter the global habitat suitability for shallow coral reef ecosystems, using statistical Bioclimatic Envelope Models rather than basing projections on any a priori assumptions of physiological tolerances or fixed thresholds. We apply two different modeling approaches (Maximum Entropy and Boosted Regression Trees) with two levels of complexity (one a simplified and reduced environmental variable version of the other). Our models project a marked temperature-driven decline in habitat suitability for many of the most significant and bio-diverse tropical coral regions, particularly in the central Indo-Pacific. This is accompanied by a temperature-driven poleward range expansion of favorable conditions accelerating up to 40-70 km per decade by 2070. We find that ocean acidification is less influential for determining future habitat suitability than warming, and its deleterious effects are centered evenly in both hemispheres between 5° and 20° latitude. Contrary to expectations, the combined impact of ocean surface temperature rise and acidification leads to little, if any, degradation in future habitat suitability across much of the Atlantic and areas currently considered 'marginal' for tropical corals, such as the eastern Equatorial Pacific. These results are consistent with fossil evidence of range expansions during past warm periods. In addition, the simplified models are particularly sensitive to short-term temperature variations and their projections correlate well with reported locations of bleaching events. Our approach offers new insights into the relative impact of two global environmental pressures associated with rising atmospheric CO2 on potential future habitats, but greater understanding of past and current controls on coral

  8. Using an index of habitat patch proximity for landscape design

    Science.gov (United States)

    Eric J. Gustafson; George R. Parker

    1994-01-01

    A proximity index (PX) inspired by island biogeography theory is described which quantifies the spatial context of a habitat patch in relation to its neighbors. The index distinguishes sparse distributions of small habitat patches from clusters of large patches. An evaluation of the relationship between PX and variation in the spatial characteristics of clusters of...

  9. Present and Future Projections of Habitat Suitability of the Asian Tiger Mosquito, a Vector of Viral Pathogens, from Global Climate Simulations.

    Science.gov (United States)

    Proestos, Y.; Christophides, G.; Erguler, K.; Tanarhte, M.; Waldock, J.; Lelieveld, J.

    2014-12-01

    Climate change can influence the transmission of vector borne diseases (VBDs) through altering the habitat suitability of insect vectors. Here we present global climate model simulations and evaluate the associated uncertainties in view of the main meteorological factors that may affect the distribution of the Asian Tiger mosquito (Aedes albopictus), which can transmit pathogens that cause Chikungunya, Dengue fever, yellow fever and various encephalitides. Using a general circulation model (GCM) at 50 km horizontal resolution to simulate mosquito survival variables including temperature, precipitation and relative humidity, we present both global and regional projections of the habitat suitability up to the middle of the 21st century. The model resolution of 50 km allows evaluation against previous projections for Europe and provides a basis for comparative analyses with other regions. Model uncertainties and performance are addressed in light of the recent CMIP5 ensemble climate model simulations for the RCP8.5 concentration pathway and using meteorological re-analysis data (ERA-Interim/ECMWF) for the recent past. Uncertainty ranges associated with the thresholds of meteorological variables that may affect the distribution of Ae. albopictus are diagnosed using fuzzy-logic methodology, notably to assess the influence of selected meteorological criteria and combinations of criteria that influence mosquito habitat suitability. From the climate projections for 2050, and adopting a habitat suitability index larger than 70%, we estimate that about 2.4 billion individuals in a land area of nearly 20 million square kilometres will potentially be exposed to Ae. albopictus. The synthesis of fuzzy-logic based on mosquito biology and climate change analysis provides new insights into the regional and global spreading of VBDs to support disease control and policy making.

  10. Evaluating timber harvesting impacts on wildlife habitat suitability using FOREX

    Science.gov (United States)

    Chris B. LeDoux

    1997-01-01

    Precommercial, commercial, and final harvesting operations can impact wildlife habitat suitability by altering the vegetation composition on a given site. Harvesting operations remove trees and many times provide the necessary perturbation to trigger successional conditions different from those that existed prior to the harvest. Although these new successional changes...

  11. The Spatial Suitable Habitat Model of Acacia decurrens in Mount Merbabu National Park

    Directory of Open Access Journals (Sweden)

    Yoko Untoro

    2017-09-01

    Full Text Available Green wattle (Acacia decurrens is an invasive alien species (IAS found in the Mount Merbabu National Park (TNGMb. This study aim to obtain spatially studies on habitat suitability models of A. decurrens in TNGMb region. In fact, this species became as a high invasive and dominance in the TNGMb and contributes the negative impact to the ecosystem. In addition, the result of this study should be useful for controling activities of A. decurrens. Predictor variables in this research were (altitude, slope, rainfall, air temperature, distance from river, NDVI, NDMI, distance from hiking trail, and distance from burnt area. The survey was conducted with random sampling of presence or absence of A. decurrens by marking the coordinate point of location using GPS. Data analysis in this research was used binary logistic regression enter method. Binary logistic regression involves the data acquisition of the presence and absence of A. decurrens as the y variable, while the predictor variable map as the variable x. The type of spatial distribution of A. decurrens in the TNGMb was identified as clumped. The Nagelkerke R2 values obtained in the model was 39,2%, while 60,8% was explained by other variables were not used in the model. The results of the logistic regression model showed a high percentage of suitability of 64,29%, a medium suitability of 28,57%, and a low suitability of 7.14% then the Implications for controlling activities of A. decurrens in TNGMb could be prioritized in high suitability habitat. Keywords: Acacia decurrens, green wattle, invasive, spatial suitable habitat 

  12. Application of GIS to predict malaria hotspots based on Anopheles arabiensis habitat suitability in Southern Africa

    Science.gov (United States)

    Gwitira, Isaiah; Murwira, Amon; Zengeya, Fadzai M.; Shekede, Munyaradzi Davis

    2018-02-01

    Malaria remains a major public health problem and a principal cause of morbidity and mortality in most developing countries. Although malaria still presents health problems, significant successes have been recorded in reducing deaths resulting from the disease. As malaria transmission continues to decline, control interventions will increasingly depend on the ability to define high-risk areas known as malaria hotspots. Therefore, there is urgent need to use geospatial tools such as geographic information system to detect spatial patterns of malaria and delineate disease hot spots for better planning and management. Thus, accurate mapping and prediction of seasonality of malaria hotspots is an important step towards developing strategies for effective malaria control. In this study, we modelled seasonal malaria hotspots as a function of habitat suitability of Anopheles arabiensis (A. Arabiensis) as a first step towards predicting likely seasonal malaria hotspots that could provide guidance in targeted malaria control. We used Geographical information system (GIS) and spatial statistic methods to identify seasonal hotspots of malaria cases at the country level. In order to achieve this, we first determined the spatial distribution of seasonal malaria hotspots using the Getis Ord Gi* statistic based on confirmed positive malaria cases recorded at health facilities in Zimbabwe over four years (1996-1999). We then used MAXENT technique to model habitat suitability of A. arabiensis from presence data collected from 1990 to 2002 based on bioclimatic variables and altitude. Finally, we used autologistic regression to test the extent to which malaria hotspots can be predicted using A. arabiensis habitat suitability. Our results show that A. arabiensis habitat suitability consistently and significantly (p < 0.05) predicts malaria hotspots from 1996 to 1999. Overall, our results show that malaria hotspots can be predicted using A. arabiensis habitat suitability, suggesting

  13. Hydropower Production and Fish Habitat Suitability: Impact and Effectiveness of Environmental Flow Prescriptions

    Science.gov (United States)

    Castellarin, A.; Galeati, G.; Ceola, S.; Pugliese, A.; Ventura, M.; Montanari, A.

    2017-12-01

    The anthropogenic alteration of the natural flow regime of a river for hydropower production can significantly modify the processes and functions associated with fluvial ecosystems. In order to preserve the fluvial habitat downstream of dams and diversion structures, environmental flows are commonly defined. Such environmental flows are generally computed from empirical methodologies, which are seldom based on site-specific studies, and may not be representative of local ecological and hydraulic conditions. Here we present the results of a quantitative analysis on the effectiveness of two alternative environmental flow scenarios prescribed in Central Italy (time-invariant experimental and empirically-based flow release versus time-variant hydrogeomorphologically-based flow release) and their impact on hydropower production and fish habitat suitability. The latter is examined by means of several models of habitat suitability curve, which is a well-known approach capable of analysing fluvial species preferences as a function of key eco-hydraulic features, such as water depth, flow velocity and river substrate. The results show an evident loss of hydropower production moving from the time-invariant experimental flow release to the hydrogeomorphological one (nearly 20% at the annual scale). Concerning the effects in terms of fish habitat suitability, our outcomes are less obvious, since they are species- and life stage-specific. The proposed analysis, which can be easily adapted to different riparian habitats and hydrological contexts, is a useful tool to guide the derivation of optimal water resource management strategies in order to ensure both hydropower production and fluvial ecosystem protection.

  14. Modelling seasonal habitat suitability for wide-ranging species: Invasive wild pigs in northern Australia.

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    Jens G Froese

    Full Text Available Invasive wildlife often causes serious damage to the economy and agriculture as well as environmental, human and animal health. Habitat models can fill knowledge gaps about species distributions and assist planning to mitigate impacts. Yet, model accuracy and utility may be compromised by small study areas and limited integration of species ecology or temporal variability. Here we modelled seasonal habitat suitability for wild pigs, a widespread and harmful invader, in northern Australia. We developed a resource-based, spatially-explicit and regional-scale approach using Bayesian networks and spatial pattern suitability analysis. We integrated important ecological factors such as variability in environmental conditions, breeding requirements and home range movements. The habitat model was parameterized during a structured, iterative expert elicitation process and applied to a wet season and a dry season scenario. Model performance and uncertainty was evaluated against independent distributional data sets. Validation results showed that an expert-averaged model accurately predicted empirical wild pig presences in northern Australia for both seasonal scenarios. Model uncertainty was largely associated with different expert assumptions about wild pigs' resource-seeking home range movements. Habitat suitability varied considerably between seasons, retracting to resource-abundant rainforest, wetland and agricultural refuge areas during the dry season and expanding widely into surrounding grassland floodplains, savanna woodlands and coastal shrubs during the wet season. Overall, our model suggested that suitable wild pig habitat is less widely available in northern Australia than previously thought. Mapped results may be used to quantify impacts, assess risks, justify management investments and target control activities. Our methods are applicable to other wide-ranging species, especially in data-poor situations.

  15. Predicted Habitat Suitability for Montipora Corals in the Au'au Channel Region

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This raster denotes predicted habitat suitability for Montipora in the Au'au Channel region. Maximum Entropy (MaxEnt) modeling software was used to create this...

  16. Predicted Habitat Suitability for Leptoseris Corals in the Au'au Channel Region

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This raster denotes predicted habitat suitability for Leptoseris in the Au'au Channel region. Maximum Entropy (MaxEnt) modeling software was used to create this...

  17. Using Risk Assessment and Habitat Suitability Models to Prioritise Invasive Species for Management in a Changing Climate.

    Science.gov (United States)

    Chai, Shauna-Lee; Zhang, Jian; Nixon, Amy; Nielsen, Scott

    2016-01-01

    Accounting for climate change in invasive species risk assessments improves our understanding of potential future impacts and enhances our preparedness for the arrival of new non-native species. We combined traditional risk assessment for invasive species with habitat suitability modeling to assess risk to biodiversity based on climate change. We demonstrate our method by assessing the risk for 15 potentially new invasive plant species to Alberta, Canada, an area where climate change is expected to facilitate the poleward expansion of invasive species ranges. Of the 15 species assessed, the three terrestrial invasive plant species that could pose the greatest threat to Alberta's biodiversity are giant knotweed (Fallopia sachalinensis), tamarisk (Tamarix chinensis), and alkali swainsonpea (Sphaerophysa salsula). We characterise giant knotweed as 'extremely invasive', with 21 times the suitable habitat between baseline and future projected climate. Tamarisk is 'extremely invasive' with a 64% increase in suitable habitat, and alkali swainsonpea is 'highly invasive' with a 21% increase in suitable habitat. Our methodology can be used to predict and prioritise potentially new invasive species for their impact on biodiversity in the context of climate change.

  18. Coral Reef Habitat Suitability in Future Climate Scenarios from NCAR CESM1 considering a Suite of Biogeochemical Variables

    Science.gov (United States)

    Freeman, L. A.; Kleypas, J. A.; Miller, A. J.

    2013-12-01

    A maximum entropy species distribution model (Maxent) is used to describe coral reef habitat in current climate conditions and to predict changes to that habitat during the 21st century. Two climate change scenarios (RCP4.5 and RCP8.5) from the National Center for Atmospheric Research's Community Earth System Model version 1 (CESM1) were used with Maxent to determine environmental suitability for the family of corals Scleractina in 1° by 1° cells. Input environmental variables most suitable for representing coral habitat limitation are isolated using a principal component analysis and include cumulative thermal stress, salinity, light availability, current speed, phosphate levels and aragonite saturation state. Considering a suite of environmental variables allows for a more synergistic view of future habitat suitability, although individual variables are found to be limiting in certain areas- for example, aragonite saturation state is limiting at higher latitudes. Climate-driven coral reef habitat changes depend strongly on the oceanic region of interest and the region of corals used to train the niche model. Increased global coral habitat loss occurred in both RCP4.5 and RCP8.5 climate projections as time progressed through the 21th century. Maximum suitable habitat loss was 82% by 2100 for RCP8.5. When only Caribbean/Atlantic coral reef environmental data is applied globally, 88% of global habitat was lost by 2100 for RCP8.5. The global runs utilizing only Pacific Ocean reefs' ability to survive showed the most significant worldwide loss, 90% by 2100 for RCP8.5. When Maxent was trained with Indian Ocean reefs, an increase in suitable habitat worldwide was estimated. Habitat suitability was found to increase by 38% in RCP4.5 by 2100 and 28% in RCP8.5 by 2050. This suggests that shallow tropical sites in the Indian Ocean basin experience conditions today that are most similar to future worldwide climate projections. Indian Ocean reefs may be ideal candidate

  19. Predicting spatial and temporal distribution of Indo-Pacific lionfish (Pterois volitans) in Biscayne Bay through habitat suitability modeling

    Science.gov (United States)

    Bernal, Nicholas A.; DeAngelis, Donald L.; Schofield, Pamela J.; Sullivan Sealey, Kathleen

    2014-01-01

    Invasive species may exhibit higher levels of growth and reproduction when environmental conditions are most suitable, and thus their effects on native fauna may be intensified. Understanding potential impacts of these species, especially in the nascent stages of a biological invasion, requires critical information concerning spatial and temporal distributions of habitat suitability. Using empirically supported environmental variables (e.g., temperature, salinity, dissolved oxygen, rugosity, and benthic substrate), our models predicted habitat suitability for the invasive lionfish (Pterois volitans) in Biscayne Bay, Florida. The use of Geographic Information Systems (GIS) as a platform for the modeling process allowed us to quantify correlations between temporal (seasonal) fluctuations in the above variables and the spatial distribution of five discrete habitat quality classes, whose ranges are supported by statistical deviations from the apparent best conditions described in prior studies. Analysis of the resulting models revealed little fluctuation in spatial extent of the five habitat classes on a monthly basis. Class 5, which represented the area with environmental variables closest to the best conditions for lionfish, occupied approximately one-third of Biscayne Bay, with subsequent habitats declining in area. A key finding from this study was that habitat suitability increased eastward from the coastline, where higher quality habitats were adjacent to the Atlantic Ocean and displayed marine levels of ambient water quality. Corroboration of the models with sightings from the USGS-NAS database appeared to support our findings by nesting 79 % of values within habitat class 5; however, field testing (i.e., lionfish surveys) is necessary to confirm the relationship between habitat classes and lionfish distribution.

  20. Using Risk Assessment and Habitat Suitability Models to Prioritise Invasive Species for Management in a Changing Climate.

    Directory of Open Access Journals (Sweden)

    Shauna-Lee Chai

    Full Text Available Accounting for climate change in invasive species risk assessments improves our understanding of potential future impacts and enhances our preparedness for the arrival of new non-native species. We combined traditional risk assessment for invasive species with habitat suitability modeling to assess risk to biodiversity based on climate change. We demonstrate our method by assessing the risk for 15 potentially new invasive plant species to Alberta, Canada, an area where climate change is expected to facilitate the poleward expansion of invasive species ranges. Of the 15 species assessed, the three terrestrial invasive plant species that could pose the greatest threat to Alberta's biodiversity are giant knotweed (Fallopia sachalinensis, tamarisk (Tamarix chinensis, and alkali swainsonpea (Sphaerophysa salsula. We characterise giant knotweed as 'extremely invasive', with 21 times the suitable habitat between baseline and future projected climate. Tamarisk is 'extremely invasive' with a 64% increase in suitable habitat, and alkali swainsonpea is 'highly invasive' with a 21% increase in suitable habitat. Our methodology can be used to predict and prioritise potentially new invasive species for their impact on biodiversity in the context of climate change.

  1. Habitat suitability models for cavity-nesting birds in a postfire landscape

    Science.gov (United States)

    Robin E. Russell; Victoria A. Saab; Jonathan G. Dudley

    2007-01-01

    Models of habitat suitability in postfire landscapes are needed by land managers to make timely decisions regarding postfire timber harvest and other management activities. Many species of cavity-nesting birds are dependent on postfire landscapes for breeding and other aspects of their life history and are responsive to postfire management activities (e.g., timber...

  2. Himalayan ibex (Capra ibex sibirica habitat suitability and range resource dynamics in the Central Karakorum National Park, Pakistan

    Directory of Open Access Journals (Sweden)

    Garee Khan

    2016-07-01

    Full Text Available The study investigates Himalayan ibex (Capra ibex sibirica and their range resource condition within the preferred habitat in the Central Karakoram National Park, Pakistan. We apply ecological niche factor analysis (ENFA using 110 ibex sighting data and 6 key biophysical variables describing the habitat conditions and produce habitat suitability and maps with GIS and statistical tool (BioMapper. The modeling results of specialization factor shows some limitation for ibex over the use of slope, elevation, vegetation types and ruggedness. The habitat area selection for the ibex is adjusted to the ibex friendly habitat available conditions. The model results predicted suitable habitat for ibex in certain places, where field observation was never recorded. The range resource dynamics depict a large area that comes under the alpine meadows has the highest seasonal productivity, assessed by remote sensing based fortnightly vegetation condition data of the last 11 years. These meadows are showing browning trend over the years, attributable to grazing practices or climate conditions. At lower elevation, there are limited areas with suitable dry steppes, which may cause stress on ibex, especially during winter.

  3. Predicted Habitat Suitability for All Mesophotic Corals in the Au'au Channel Region

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This raster denotes predicted habitat suitability for all mesophotic corals in the Au'au Channel region. Maximum Entropy (MaxEnt) modeling software was used to...

  4. Invasion establishment and habitat suitability of Chromolaena odorata (L. King and Robinson over time and space in the western Himalayan forests of India

    Directory of Open Access Journals (Sweden)

    Gautam Mandal

    2014-12-01

    Full Text Available Habitat suitability assessment of the invasive species Chromolaena odorata (L. King and Robinson from Himalayan forests reveals some interesting findings and conclusions. At different study sites, 29 of 72 species were exotic and invasive and comprised 21 genera and eight families. Indigenous species accounted for 59% of the total species and comprised 26 genera and 11 families. Perennials outnumbered the annuals in all study sites. Chromolaena odorata and Lantana camara L. were the only invasive species that were common to all sites with high importance value index values. The present work reveals that sites with high biotic pressure, maximum temperature variation, open forest canopy, and free from herbivory are the most suitable habitat for the growth of C. odorata. An elevated level of phosphorus, potassium, magnesium, soil organic matter, and nitrogen and acidic soil in all invaded sites are possible reasons for further invasion of C. odorata.

  5. Global Habitat Suitability and Ecological Niche Separation in the Phylum Placozoa.

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    Omid Paknia

    Full Text Available The enigmatic placozoans, which hold a key position in the metazoan Tree of Life, have attracted substantial attention in many areas of biological and biomedical research. While placozoans have become an emerging model system, their ecology and particularly biogeography remain widely unknown. In this study, we use modelling approaches to explore habitat preferences, and distribution pattern of the placozoans phylum. We provide hypotheses for discrete ecological niche separation between genetic placozoan lineages, which may also help to understand biogeography patterns in other small marine invertebrates. We, here, used maximum entropy modelling to predict placozoan distribution using 20 environmental grids of 9.2 km2 resolution. In addition, we used recently developed metrics of niche overlap to compare habitat suitability models of three genetic clades. The predicted distributions range from 55°N to 44°S and are restricted to regions of intermediate to warm sea surface temperatures. High concentrations of salinity and low nutrient concentrations appear as secondary factors. Tests of niche equivalency reveal the largest differences between placozoan clades I and III. Interestingly, the genetically well-separated clades I and V appear to be ecologically very similar. Our habitat suitability models predict a wider latitudinal distribution for placozoans, than currently described, especially in the northern hemisphere. With respect to biogeography modelling, placozoans show patterns somewhere between higher metazoan taxa and marine microorganisms, with the first group usually showing complex biogeographies and the second usually showing "no biogeography."

  6. Pan-Arctic sea ice-algal chl a biomass and suitable habitat are largely underestimated for multiyear ice.

    Science.gov (United States)

    Lange, Benjamin A; Flores, Hauke; Michel, Christine; Beckers, Justin F; Bublitz, Anne; Casey, John Alec; Castellani, Giulia; Hatam, Ido; Reppchen, Anke; Rudolph, Svenja A; Haas, Christian

    2017-11-01

    There is mounting evidence that multiyear ice (MYI) is a unique component of the Arctic Ocean and may play a more important ecological role than previously assumed. This study improves our understanding of the potential of MYI as a suitable habitat for sea ice algae on a pan-Arctic scale. We sampled sea ice cores from MYI and first-year sea ice (FYI) within the Lincoln Sea during four consecutive spring seasons. This included four MYI hummocks with a mean chl a biomass of 2.0 mg/m 2 , a value significantly higher than FYI and MYI refrozen ponds. Our results support the hypothesis that MYI hummocks can host substantial ice-algal biomass and represent a reliable ice-algal habitat due to the (quasi-) permanent low-snow surface of these features. We identified an ice-algal habitat threshold value for calculated light transmittance of 0.014%. Ice classes and coverage of suitable ice-algal habitat were determined from snow and ice surveys. These ice classes and associated coverage of suitable habitat were applied to pan-Arctic CryoSat-2 snow and ice thickness data products. This habitat classification accounted for the variability of the snow and ice properties and showed an areal coverage of suitable ice-algal habitat within the MYI-covered region of 0.54 million km 2 (8.5% of total ice area). This is 27 times greater than the areal coverage of 0.02 million km 2 (0.3% of total ice area) determined using the conventional block-model classification, which assigns single-parameter values to each grid cell and does not account for subgrid cell variability. This emphasizes the importance of accounting for variable snow and ice conditions in all sea ice studies. Furthermore, our results indicate the loss of MYI will also mean the loss of reliable ice-algal habitat during spring when food is sparse and many organisms depend on ice-algae. © 2017 The Authors. Global Change Biology Published by John Wiley & Sons Ltd.

  7. Assessing the suitable habitat for reintroduction of brown trout (Salmo trutta forma fario) in a lowland river: A modeling approach.

    Science.gov (United States)

    Boets, Pieter; Gobeyn, Sacha; Dillen, Alain; Poelman, Eddy; Goethals, Peter L M

    2018-05-01

    Huge efforts have been made during the past decades to improve the water quality and to restore the physical habitat of rivers and streams in western Europe. This has led to an improvement in biological water quality and an increase in fish stocks in many countries. However, several rheophilic fish species such as brown trout are still categorized as vulnerable in lowland streams in Flanders (Belgium). In order to support cost-efficient restoration programs, habitat suitability modeling can be used. In this study, we developed an ensemble of habitat suitability models using metaheuristic algorithms to explore the importance of a large number of environmental variables, including chemical, physical, and hydromorphological characteristics to determine the suitable habitat for reintroduction of brown trout in the Zwalm River basin (Flanders, Belgium), which is included in the Habitats Directive. Mean stream velocity, water temperature, hiding opportunities, and presence of pools or riffles were identified as the most important variables determining the habitat suitability. Brown trout mainly preferred streams with a relatively high mean reach stream velocity (0.2-1 m/s), a low water temperature (7-15°C), and the presence of pools. The ensemble of models indicated that most of the tributaries and headwaters were suitable for the species. Synthesis and applications . Our results indicate that this modeling approach can be used to support river management, not only for brown trout but also for other species in similar geographical regions. Specifically for the Zwalm River basin, future restoration of the physical habitat, removal of the remaining migration barriers and the development of suitable spawning grounds could promote the successful restoration of brown trout.

  8. A resource-based modelling framework to assess habitat suitability for steppe birds in semiarid Mediterranean agricultural systems.

    Directory of Open Access Journals (Sweden)

    Laura Cardador

    Full Text Available European agriculture is undergoing widespread changes that are likely to have profound impacts on farmland biodiversity. The development of tools that allow an assessment of the potential biodiversity effects of different land-use alternatives before changes occur is fundamental to guiding management decisions. In this study, we develop a resource-based model framework to estimate habitat suitability for target species, according to simple information on species' key resource requirements (diet, foraging habitat and nesting site, and examine whether it can be used to link land-use and local species' distribution. We take as a study case four steppe bird species in a lowland area of the north-eastern Iberian Peninsula. We also compare the performance of our resource-based approach to that obtained through habitat-based models relating species' occurrence and land-cover variables. Further, we use our resource-based approach to predict the effects that change in farming systems can have on farmland bird habitat suitability and compare these predictions with those obtained using the habitat-based models. Habitat suitability estimates generated by our resource-based models performed similarly (and better for one study species than habitat based-models when predicting current species distribution. Moderate prediction success was achieved for three out of four species considered by resource-based models and for two of four by habitat-based models. Although, there is potential for improving the performance of resource-based models, they provide a structure for using available knowledge of the functional links between agricultural practices, provision of key resources and the response of organisms to predict potential effects of changing land-uses in a variety of context or the impacts of changes such as altered management practices that are not easily incorporated into habitat-based models.

  9. Shaken but not stirred: Multiscale habitat suitability modeling of sympatric marten species (Martes martes and Martes foina) in the northern Iberian Peninsula

    Science.gov (United States)

    Maria Vergara; Samuel A. Cushman; Fermin Urra; Aritz Ruiz-Gonzalez

    2016-01-01

    Multispecies and multiscale habitat suitability models (HSM) are important to identify the environmental variables and scales influencing habitat selection and facilitate the comparison of closely related species with different ecological requirements. Objectives This study explores the multiscale relationships of habitat suitability for the pine (Martes...

  10. Influence of discharge on fish habitat suitability curves in mountain watercourses in IFIM methodology

    Directory of Open Access Journals (Sweden)

    Macura Viliam

    2018-03-01

    Full Text Available In this study, the quality of the aquatic habitats of mountain and piedmont streams was evaluated using the ‘Instream Flow Incremental Methodology (IFIM’ decision-making tool. The quality of habitats was interpreted from the behaviour of bioindicators in the form of habitat suitability curves (HSCs. From 1995 until the present, 59 different reaches of 43 mountain streams in Slovakia and 3 validation reaches were evaluated, and the results analysed. The aim of this study was to generalize the parameters of the HSCs for the brown trout. The generalized curves will be useful for water management planning. It is difficult and time-consuming to take hydrometrical and ichthyological measurements at different water levels. Therefore, we developed a methodology for modifying suitability curves based on an ichthyological survey during a low flow and a flow at which fish lose the ability to resist the flow velocity. The study provides the information how such curves can be modified for a wider flow range. In summary, this study shows that generalized HSCs provide representative data that can be used to support both the design of river restoration and the assessment of the impacts of the water use or of climate change on stream habitat quality.

  11. Predicting Species Distributions Using Record Centre Data: Multi-Scale Modelling of Habitat Suitability for Bat Roosts.

    Science.gov (United States)

    Bellamy, Chloe; Altringham, John

    2015-01-01

    Conservation increasingly operates at the landscape scale. For this to be effective, we need landscape scale information on species distributions and the environmental factors that underpin them. Species records are becoming increasingly available via data centres and online portals, but they are often patchy and biased. We demonstrate how such data can yield useful habitat suitability models, using bat roost records as an example. We analysed the effects of environmental variables at eight spatial scales (500 m - 6 km) on roost selection by eight bat species (Pipistrellus pipistrellus, P. pygmaeus, Nyctalus noctula, Myotis mystacinus, M. brandtii, M. nattereri, M. daubentonii, and Plecotus auritus) using the presence-only modelling software MaxEnt. Modelling was carried out on a selection of 418 data centre roost records from the Lake District National Park, UK. Target group pseudoabsences were selected to reduce the impact of sampling bias. Multi-scale models, combining variables measured at their best performing spatial scales, were used to predict roosting habitat suitability, yielding models with useful predictive abilities. Small areas of deciduous woodland consistently increased roosting habitat suitability, but other habitat associations varied between species and scales. Pipistrellus were positively related to built environments at small scales, and depended on large-scale woodland availability. The other, more specialist, species were highly sensitive to human-altered landscapes, avoiding even small rural towns. The strength of many relationships at large scales suggests that bats are sensitive to habitat modifications far from the roost itself. The fine resolution, large extent maps will aid targeted decision-making by conservationists and planners. We have made available an ArcGIS toolbox that automates the production of multi-scale variables, to facilitate the application of our methods to other taxa and locations. Habitat suitability modelling has the

  12. A GIS model of habitat suitability for Solanum conocarpum (Solanaceae) in St. John, US Virgin Islands

    Science.gov (United States)

    Palumbo, Matthew D.; Fleming, Jonathan P.; Monsegur, Omar A.; Vilella, Francisco

    2016-01-01

    Solanum conocarpum (Solanaceae) (Marron Bacora) is a rare, dry-forest shrub endemic to the island of St. John, US Virgin Islands, considered for listing under the Endangered Species Act. Given its status as a species of conservation concern, we incorporated environmental characteristics of 3 observed populations and 5 additional known locations into a geographic information system (GIS) analysis to create a habitat-suitability model for the species on the island of St. John. Our model identified 1929.87 ha of highly suitable and moderately suitable habitat. Of these, 1161.20 ha (60.2%) occurred within the boundaries of Virgin Islands National Park. Our model provides spatial information on potential locations for future surveys and restoration sites for this endemic species of the US Virgin Islands.

  13. Models to predict suitable habitat for juvenile bull trout in Washington state

    Science.gov (United States)

    Jason B. Dunham; G. L. Chandler

    2001-01-01

    This report describes results of research conducted in 2000 to develop models of suitable habitat for juvenile bull trout (Salvelinus confluentus) in Washington State. The research is associated with a cooperative agreement (Agreement #134100H001) between U.S. Fish and Wildlife Service (USFWS) and the U.S. Forest Service, Rocky Mountain Research...

  14. Computational fluid dynamics-habitat suitability index (CFD-HSI) modelling as an exploratory tool for assessing passability of riverine migratory challenge zones for fish

    Science.gov (United States)

    Haro, Alexander J.; Chelminski, Michael; Dudley, Robert W.

    2015-01-01

    We developed two-dimensional computational fluid hydraulics-habitat suitability index (CFD-HSI) models to identify and qualitatively assess potential zones of shallow water depth and high water velocity that may present passage challenges for five major anadromous fish species in a 2.63-km reach of the main stem Penobscot River, Maine, as a result of a dam removal downstream of the reach. Suitability parameters were based on distribution of fish lengths and body depths and transformed to cruising, maximum sustained and sprint swimming speeds. Zones of potential depth and velocity challenges were calculated based on the hydraulic models; ability of fish to pass a challenge zone was based on the percent of river channel that the contiguous zone spanned and its maximum along-current length. Three river flows (low: 99.1 m3 sec-1; normal: 344.9 m3 sec-1; and high: 792.9 m3 sec-1) were modelled to simulate existing hydraulic conditions and hydraulic conditions simulating removal of a dam at the downstream boundary of the reach. Potential depth challenge zones were nonexistent for all low-flow simulations of existing conditions for deeper-bodied fishes. Increasing flows for existing conditions and removal of the dam under all flow conditions increased the number and size of potential velocity challenge zones, with the effects of zones being more pronounced for smaller species. The two-dimensional CFD-HSI model has utility in demonstrating gross effects of flow and hydraulic alteration, but may not be as precise a predictive tool as a three-dimensional model. Passability of the potential challenge zones cannot be precisely quantified for two-dimensional or three-dimensional models due to untested assumptions and incomplete data on fish swimming performance and behaviours.

  15. Re-establishing the pecking order: Niche models reliably predict suitable habitats for the reintroduction of red-billed oxpeckers.

    Science.gov (United States)

    Kalle, Riddhika; Combrink, Leigh; Ramesh, Tharmalingam; Downs, Colleen T

    2017-03-01

    Distributions of avian mutualists are affected by changes in biotic interactions and environmental conditions driven directly/indirectly by human actions. The range contraction of red-billed oxpeckers ( Buphagus erythrorhynchus ) in South Africa is partly a result of the widespread use of acaracides (i.e., mainly cattle dips), toxic to both ticks and oxpeckers. We predicted the habitat suitability of red-billed oxpeckers in South Africa using ensemble models to assist the ongoing reintroduction efforts and to identify new reintroduction sites for population recovery. The distribution of red-billed oxpeckers was influenced by moderate to high tree cover, woodland habitats, and starling density (a proxy for cavity-nesting birds) with regard to nest-site characteristics. Consumable resources (host and tick density), bioclimate, surface water body density, and proximity to protected areas were other influential predictors. Our models estimated 42,576.88-98,506.98 km 2 of highly suitable habitat (0.5-1) covering the majority of Limpopo, Mpumalanga, North West, a substantial portion of northern KwaZulu-Natal (KZN) and the Gauteng Province. Niche models reliably predicted suitable habitat in 40%-61% of the reintroduction sites where breeding is currently successful. Ensemble, boosted regression trees and generalized additive models predicted few suitable areas in the Eastern Cape and south of KZN that are part of the historic range. A few southern areas in the Northern Cape, outside the historic range, also had suitable sites predicted. Our models are a promising decision support tool for guiding reintroduction programs at macroscales. Apart from active reintroductions, conservation programs should encourage farmers and/or landowners to use oxpecker-compatible agrochemicals and set up adequate nest boxes to facilitate the population recovery of the red-billed oxpecker, particularly in human-modified landscapes. To ensure long-term conservation success, we suggest that

  16. Bioclimatic predictions of habitat suitability for the biofuel switchgrass in North America under current and future climate scenarios

    International Nuclear Information System (INIS)

    Barney, Jacob N.; DiTomaso, Joseph M.

    2010-01-01

    Dedicated biofuel crops, while providing economic and other benefits, may adversely impact biodiversity directly via land use conversion, or indirectly via creation of novel invasive species. To mitigate negative impacts bioclimatic envelope models (BEM) can be used to estimate the potential distribution and suitable habitat based on the climate and distribution in the native range. We used CLIMEX to evaluate the regions of North America suitable for agronomic production, as well as regions potentially susceptible to an invasion of switchgrass (Panicum virgatum) under both current and future climate scenarios. Model results show that >8.7 million km 2 of North America has suitable to very favorable habitat, most of which occurs east of the Rocky Mountains. The non-native range of western North America is largely unsuitable to switchgrass as a crop or potential weed unless irrigation or permanent water is available. Under both the CGCM2 and HadCM3 climate models and A2 and B2 emissions scenarios, an overall increase in suitable habitat is predicted over the coming century, although the western US remains unsuitable. Our results suggest that much of North America is suitable for switchgrass cultivation, although this is likely to shift north in the coming century. Our results also agree with field collections of switchgrass outside its native range, which indicate that switchgrass is unlikely to establish unless it has access to water throughout the year (e.g., along a stream). Thus, it is the potential invasion of switchgrass into riparian habitats in the West that requires further investigation. (author)

  17. Habitat Suitability analysis of Koklass (Pucrasia macrolopha) Pheasant in Churdhar Wildlife Sanctuary of Himachal Pradesh, India using Geospatial Technology

    Science.gov (United States)

    Eliza, K.; Sarma, K.

    2014-12-01

    Pheasants are at the brink of destruction due to degradation of forests, environmental pollution, climatic changes and extensive hunting of wild floras and faunas.The problem is more acute in the developing countries where wildlife and biodiversity conservation are often less prioritized due to more pressing demands of food security and poverty alleviation. Koklass Pheasant (Pucrasia macrolopha) species is distributed from Afghanistan and Pakistan in the east along the Himalayas to southeastern Tibet, western China and southeastern Mongolia.This species is grouped under endangered species in Red Data Book of Zoological Survey of India and also classified as least concern species according to IUCN Red List of Threatened Species.Conservation biologists and managers need a range of both classical analyses and specific modern tools to face the increasing threats to biodiversity. Among these tools, habitat-suitability modeling has recently emerged as a relevant technique to assess global impacts to define wide conservation priorities.The present study is carried out using remote sensing satellite imagery and GIS modeling technique for assessing habitat suitability of Koklass Pheasants and finding out the habitat factors influencing the Koklass distribution in Churdhar Wildlife Sanctuary, India. Effective management and conservation of wildlife populations and their habitats largely depend on our ability to understand and predict species-habitat interactions. Different thematic maps viz., land use/cover, forest types, drainage buffer, multiple ring buffers of sighting locations and multiple ring buffers of roads have been prepared to support the objective of the study. The Weighted Overlay Analysis model is used for identifying different potential areas of habitat for this endangered species. The most suitable area for Koklass Pheasant within the Wildlife Sanctuary is found to be about 23.8 percent of the total area which is due to favourable habitat conditions for the

  18. Historical habitat connectivity affects current genetic structure in a grassland species

    Czech Academy of Sciences Publication Activity Database

    Münzbergová, Zuzana; Cousins, S.A.O.; Herben, Tomáš; Plačková, Ivana; Mildén, M.; Ehrlén, J.

    2013-01-01

    Roč. 15, č. 1 (2013), s. 195-202 ISSN 1435-8603 Institutional research plan: CEZ:AV0Z60050516 Institutional support: RVO:67985939 Keywords : Beals index * habitat isolation * habitat suitability Subject RIV: EF - Botanics Impact factor: 2.405, year: 2013

  19. Wildlife Habitats Suitability Modelling using Fuzzy Inference System: A Case Study of Persian Leopard (Panthera pardus saxicolor in Shimbar Protected Area

    Directory of Open Access Journals (Sweden)

    Z. Obeidavi

    2017-06-01

    Full Text Available Several modelling techniques have been developed for habitat suitability modelling. In the meantime, the Fuzzy Inference System (FIS with ability to model uncertainty of input variables is an effective method to model wildlife species habitat suitability. So, Persian Leopard habitat suitability was predicted in Shimbar Protected Area using FIS. Therefore, the effective environmental variables were determined. We also defined and determined the linguistic variables, linguistic values, and range of them. Then, we designed the membership functions of the fuzzy sets of the input and output variables. Also, the definition of the fuzzy rules in the system was performed. Finally, the defuzzification of output was carried out. The accuracy of the predictive model was tested using AUC. Also, 11 FISs were developed to determine sensitivity of the models and important variables in modelling. The results showed that the predictive model was more efficient than the random model (AUC=0.960. In addition, the ‘distance to capra’ was the most important predictor. According to the success of FIS in Persian Leopard habitat suitability modelling, we suggest this method to improve and complete the existing spatial information of wildlife habitats in Iran, especially about regions and species that have been less studied.

  20. Microcomputer software for calculating an elk habitat effectiveness index on Blue Mountain winter ranges.

    Science.gov (United States)

    Mark Hitchcock; Alan. Ager

    1992-01-01

    National Forests in the Pacific Northwest Region have incorporated elk habitat standards into Forest plans to ensure that elk habitat objectives are met on multiple use land allocations. Many Forests have employed versions of the habitat effectiveness index (HEI) as a standard method to evaluate habitat. Field application of the HEI model unfortunately is a formidable...

  1. Habitat suitability and ecological niches of different plankton functional types in the global ocean

    Science.gov (United States)

    Vogt, Meike; Brun, Philipp; Payne, Mark R.; O'Brien, Colleen J.; Bednaršek, Nina; Buitenhuis, Erik T.; Doney, Scott C.; Leblanc, Karine; Le Quéré, Corinne; Luo, Yawei; Moriarty, Róisín; O'Brien, Todd D.; Schiebel, Ralf; Swan, Chantal

    2013-04-01

    Marine plankton play a central role in the biogeochemical cycling of important elements such as carbon, nitrogen, and sulphur. While our knowledge about marine ecosystem structure and functioning is still scarce and episodic, several recent observational studies confirm that marine ecosystems have been changing due to recent climate change, overfishing, and coastal eutrophication. In order to better understand marine ecosystem dynamics, the MAREDAT initiative has recently collected abundance and biomass data for 5 autotrophic (diatoms, Phaeocystis, coccolithophores, nitrogen fixers, picophytoplankton), and 6 heterotrophic plankton functional types (PFTs; bacteria, micro-, meso- and macrozooplankton, foraminifera and pteropods). Species distribution models (SDMs) are statistical tools that can be used to derive information about species habitats in space and time. They have been used extensively for a wide range of ecological applications in terrestrial ecosystems, but here we present the first global application in the marine realm, which was made possible by the MAREDAT data synthesis effort. We use a maximum entropy SDM to simulate global habitat suitability, habitat extent and ecological niches for different PFTs in the modern ocean. Present habitat suitability is derived from presence-only MAREDAT data and the observed annual and monthly mean levels of physiologically relevant variables such as SST, nutrient concentration or photosynthetic active radiation received in the mixed layer. This information can then be used to derive ecological niches for different species or taxa within each PFT, and to compare the ecological niches of different PFTs. While these results still need verification because data was not available for all ocean regions for all PFTs, they can give a first indication what present and future plankton habitats may look like, and what consequences we may have to expect for future marine ecosystem functioning and service provision in a warmer

  2. Fuzzy modelling of Atlantic salmon physical habitat

    Science.gov (United States)

    St-Hilaire, André; Mocq, Julien; Cunjak, Richard

    2015-04-01

    Fish habitat models typically attempt to quantify the amount of available river habitat for a given fish species for various flow and hydraulic conditions. To achieve this, information on the preferred range of values of key physical habitat variables (e.g. water level, velocity, substrate diameter) for the targeted fishs pecies need to be modelled. In this context, we developed several habitat suitability indices sets for three Atlantic salmon life stages (young-of-the-year (YOY), parr, spawning adults) with the help of fuzzy logic modeling. Using the knowledge of twenty-seven experts, from both sides of the Atlantic Ocean, we defined fuzzy sets of four variables (depth, substrate size, velocity and Habitat Suitability Index, or HSI) and associated fuzzy rules. When applied to the Romaine River (Canada), median curves of standardized Weighted Usable Area (WUA) were calculated and a confidence interval was obtained by bootstrap resampling. Despite the large range of WUA covered by the expert WUA curves, confidence intervals were relatively narrow: an average width of 0.095 (on a scale of 0 to 1) for spawning habitat, 0.155 for parr rearing habitat and 0.160 for YOY rearing habitat. When considering an environmental flow value corresponding to 90% of the maximum reached by WUA curve, results seem acceptable for the Romaine River. Generally, this proposed fuzzy logic method seems suitable to model habitat availability for the three life stages, while also providing an estimate of uncertainty in salmon preferences.

  3. Habitat Evaluation Procedures (HEP) Report : Priest River, 2004-2005 Technical Report.

    Energy Technology Data Exchange (ETDEWEB)

    Entz, Ray

    2005-02-01

    On July 6, 2004, the Habitat Evaluation Procedure (HEP) was used to determine baseline habitat suitability on the Priest River property, an acquisition completed by the Kalispel Tribe of Indians in 2001. Evaluation species and appropriate models include bald eagle, black-capped chickadee, Canada goose, mallard, yellow warbler, and white-tailed deer. Habitat Suitability Index (HSI) values were visually estimated and agreed upon by all HEP team members. The Priest River Project provides a total of 105.41 Habitat Units (HUs) for the species evaluated. Conifer forest habitat provides 26.95 HUs for bald eagle, black-capped chickadee, and white-tailed deer. Grassland habitat provides 23.78 HUs for Canada goose and mallard. Scmb-shrub vegetation provides 54.68 HUs for mallard, yellow warbler, and white-tailed deer.

  4. Increase in quantity and quality of suitable areas for invasive species as climate changes.

    Science.gov (United States)

    Bertelsmeier, Cleo; Luque, Gloria M; Courchamp, Franck

    2013-12-01

    As climatically suitable range projections become increasingly used to assess distributions of species, we recommend systematic assessments of the quality of habitat in addition to the classical binary classification of habitat. We devised a method to assess occurrence probability, captured by a climatic suitability index, through which we could determine variations in the quality of potential habitat. This relative risk assessment circumvents the use of an arbitrary suitability threshold. We illustrated our method with 2 case studies on invasive ant species. We estimated invasion potential of the destroyer ant (Monomorium destructor) and the European fire ant (Myrmica rubra) on a global scale currently and by 2080 with climate change. We found that 21.1% of the world's landmass currently has a suitable climate for the destroyer ant and 16% has a suitable climate for European fire ant. Our climatic suitability index showed that both ant species would benefit from climate change, but in different ways. The size of the potential distribution increased by 35.8% for the destroyer ant. Meanwhile, the total area of potential distribution remained the same for the European fire ant (>0.05%), but the level of climatic suitability within this range increased greatly and led to an improvement in habitat quality (i.e., of invasive species' establishment likelihood). Either through quantity or quality of suitable areas, both invasive ant species are likely to increase the extent of their invasion in the future, following global climate change. Our results show that species may increase their range if either more areas become suitable or if the available areas present improved suitability. Studies in which an arbitrary suitability threshold was used may overlook changes in area quality within climatically suitable areas and as a result reach incorrect predictions. Incremento de la Cantidad y Calidad de Áreas Idóneas para Especies Invasoras a Medida que Cambia el Clima.

  5. Utilizing NASA Earth Observations to investigate habitat suitability of the Cape Vulture in the Western Cape Province of South Africa

    Science.gov (United States)

    Gray, D.; Estes, M. G., Jr.; Griffin, R.; Estes, S. M.

    2017-12-01

    As the global urban population rapidly increases, many wild species lose habitat to human development. The Western Cape of South Africa contains one of Earth's 35 biodiversity hotspots, with remarkably high levels of species richness and endemism. Understanding the relationship between anthropogenic changes and key species in this region is crucial for conservation of its threatened ecosystems. The objective of this research was to investigate the effect that climate change and urbanization each have on habitat suitability of the Cape Vulture. This research utilized NASA satellite data and crowdsourced species sightings to model past, current, and future habitat suitability for this key species in the Western Cape. Data used from NASA Earth Observations included: Landsat 8- derived Land Cover, Modis Land Surface Temperature, Digital Elevation Models from the Shuttle Radar Topography Mission, and precipitation data which integrated in-situ stations with Infrared data. Species observations were sourced from the Global Biodiversity Information Facility online database. A geospatial modelling framework was used to generate maps of present, past and future suitable habitats for analysis and comparison. Changes in precipitation and temperature may be a factor in the extreme loss of habitat since 1995, and predict even more drastic loss in the future. This research provides insights on anthropogenic effects on a species' range which may be used to inform discussions of conservation as an element of environmentally sustainable development.

  6. Future habitat suitability for coral reef ecosystems under global warming and ocean acidification

    OpenAIRE

    Couce, Elena M; Ridgwell, Andy J; Hendy, Erica

    2013-01-01

    Rising atmospheric CO2 concentrations are placing spatially divergent stresses on the world’s tropical coral reefs through increasing ocean surface temperatures and ocean acidification. We show how these two stressors combine to alter the global habitat suitability for shallow coral reef ecosystems, using statistical Bioclimatic Envelope Models rather than basing projections on any a priori assumptions of physiological tolerances or fixed thresholds. We apply two different modeling approaches...

  7. Smartphone-based distributed data collection enables rapid assessment of shorebird habitat suitability

    Science.gov (United States)

    Thieler, E. Robert; Zeigler, Sara; Winslow, Luke; Hines, Megan K.; Read, Jordan S.; Walker, Jordan I.

    2016-01-01

    Understanding and managing dynamic coastal landscapes for beach-dependent species requires biological and geological data across the range of relevant environments and habitats. It is difficult to acquire such information; data often have limited focus due to resource constraints, are collected by non-specialists, or lack observational uniformity. We developed an open-source smartphone application called iPlover that addresses these difficulties in collecting biogeomorphic information at piping plover (Charadrius melodus) nest sites on coastal beaches. This paper describes iPlover development and evaluates data quality and utility following two years of collection (n = 1799 data points over 1500 km of coast between Maine and North Carolina, USA). We found strong agreement between field user and expert assessments and high model skill when data were used for habitat suitability prediction. Methods used here to develop and deploy a distributed data collection system have broad applicability to interdisciplinary environmental monitoring and modeling.

  8. Development of tiger habitat suitability model using geospatial tools-a case study in Achankmar Wildlife Sanctuary (AMWLS), Chhattisgarh India.

    Science.gov (United States)

    Singh, R; Joshi, P K; Kumar, M; Dash, P P; Joshi, B D

    2009-08-01

    Geospatial tools supported by ancillary geo-database and extensive fieldwork regarding the distribution of tiger and its prey in Anchankmar Wildlife Sanctuary (AMWLS) were used to build a tiger habitat suitability model. This consists of a quantitative geographical information system (GIS) based approach using field parameters and spatial thematic information. The estimates of tiger sightings, its prey sighting and predicted distribution with the assistance of contextual environmental data including terrain, road network, settlement and drainage surfaces were used to develop the model. Eight variables in the dataset viz., forest cover type, forest cover density, slope, aspect, altitude, and distance from road, settlement and drainage were seen as suitable proxies and were used as independent variables in the analysis. Principal component analysis and binomial multiple logistic regression were used for statistical treatments of collected habitat parameters from field and independent variables respectively. The assessment showed a strong expert agreement between the predicted and observed suitable areas. A combination of the generated information and published literature was also used while building a habitat suitability map for the tiger. The modeling approach has taken the habitat preference parameters of the tiger and potential distribution of prey species into account. For assessing the potential distribution of prey species, independent suitability models were developed and validated with the ground truth. It is envisaged that inclusion of the prey distribution probability strengthens the model when a key species is under question. The results of the analysis indicate that tiger occur throughout the sanctuary. The results have been found to be an important input as baseline information for population modeling and natural resource management in the wildlife sanctuary. The development and application of similar models can help in better management of the protected

  9. Using population viability analysis, genomics, and habitat suitability to forecast future population patterns of Little Owl Athene noctua across Europe.

    Science.gov (United States)

    Andersen, Line Holm; Sunde, Peter; Pellegrino, Irene; Loeschcke, Volker; Pertoldi, Cino

    2017-12-01

    The agricultural scene has changed over the past decades, resulting in a declining population trend in many species. It is therefore important to determine the factors that the individual species depend on in order to understand their decline. The landscape changes have also resulted in habitat fragmentation, turning once continuous populations into metapopulations. It is thus increasingly important to estimate both the number of individuals it takes to create a genetically viable population and the population trend. Here, population viability analysis and habitat suitability modeling were used to estimate population viability and future prospects across Europe of the Little Owl Athene noctua , a widespread species associated with agricultural landscapes. The results show a high risk of population declines over the coming 100 years, especially toward the north of Europe, whereas populations toward the southeastern part of Europe have a greater probability of persistence. In order to be considered genetically viable, individual populations must count 1,000-30,000 individuals. As Little Owl populations of several countries count <30,000, and many isolated populations in northern Europe count <1,000 individuals, management actions resulting in exchange of individuals between populations or even countries are probably necessary to prevent losing <1% genetic diversity over a 100-year period. At a continental scale, a habitat suitability analysis suggested Little Owl to be affected positively by increasing temperatures and urban areas, whereas an increased tree cover, an increasing annual rainfall, grassland, and sparsely vegetated areas affect the presence of the owl negatively. However, the low predictive power of the habitat suitability model suggests that habitat suitability might be better explained at a smaller scale.

  10. Shifts in the suitable habitat available for brown trout (Salmo trutta L.) under short-term climate change scenarios.

    Science.gov (United States)

    Muñoz-Mas, R; Lopez-Nicolas, A; Martínez-Capel, F; Pulido-Velazquez, M

    2016-02-15

    The impact of climate change on the habitat suitability for large brown trout (Salmo trutta L.) was studied in a segment of the Cabriel River (Iberian Peninsula). The future flow and water temperature patterns were simulated at a daily time step with M5 models' trees (NSE of 0.78 and 0.97 respectively) for two short-term scenarios (2011-2040) under the representative concentration pathways (RCP 4.5 and 8.5). An ensemble of five strongly regularized machine learning techniques (generalized additive models, multilayer perceptron ensembles, random forests, support vector machines and fuzzy rule base systems) was used to model the microhabitat suitability (depth, velocity and substrate) during summertime and to evaluate several flows simulated with River2D©. The simulated flow rate and water temperature were combined with the microhabitat assessment to infer bivariate habitat duration curves (BHDCs) under historical conditions and climate change scenarios using either the weighted usable area (WUA) or the Boolean-based suitable area (SA). The forecasts for both scenarios jointly predicted a significant reduction in the flow rate and an increase in water temperature (mean rate of change of ca. -25% and +4% respectively). The five techniques converged on the modelled suitability and habitat preferences; large brown trout selected relatively high flow velocity, large depth and coarse substrate. However, the model developed with support vector machines presented a significantly trimmed output range (max.: 0.38), and thus its predictions were banned from the WUA-based analyses. The BHDCs based on the WUA and the SA broadly matched, indicating an increase in the number of days with less suitable habitat available (WUA and SA) and/or with higher water temperature (trout will endure impoverished environmental conditions ca. 82% of the days). Finally, our results suggested the potential extirpation of the species from the study site during short time spans. Copyright © 2015

  11. Hydrographic influence on the spawning habitat suitability of western Baltic cod (Gadus morhua)

    DEFF Research Database (Denmark)

    Hüssy, K.; Hinrichsen, H.-H.; Huwer, B.

    2012-01-01

    Hydrographic influence on the spawning habitat suitability of western Baltic cod (Gadus morhua) – ICES Journal of Marine Science, 69: 1736–1743.Recruitment variability of marine fish is influenced by the reproductive potential of the stock (i.e. stock characteristics and abundance) and the survival...... of early life stages, mediated by environmental conditions of both a physical (water temperature, salinity and oxygen conditions, ocean currents) and a biological nature (i.e. food, predators). The objective of this study is to assess the importance of variability in environmental conditions within...... allowing survival of western Baltic cod eggs indicates that favourable conditions predominantly occurred during the late spawning season in April/May, while minimum survival rates could be expected from January to March. Unsuitable time periods and habitats exhibiting the highest mortality rates...

  12. Coupling habitat suitability and ecosystem health with AEHRA to estimate E-flows under intensive human activities

    Science.gov (United States)

    Zhao, C. S.; Yang, S. T.; Zhang, H. T.; Liu, C. M.; Sun, Y.; Yang, Z. Y.; Zhang, Y.; Dong, B. E.; Lim, R. P.

    2017-08-01

    Sustaining adequate environmental flows (e-flows) is a key principle for maintaining river biodiversity and ecosystem health, and for supporting sustainable water resource management in basins under intensive human activities. But few methods could correctly relate river health to e-flows assessment at the catchment scale when they are applied to rivers highly impacted by human activities. An effective method is presented in this study to closely link river health to e-flows assessment for rivers at the catchment scale. Key fish species, as indicators of ecosystem health, were selected by using the foodweb model. A multi-species-based habitat suitability model (MHSI) was improved, and coupled with dominance of the key fish species as well as the Index of Biological Integrity (IBI) to enhance its accuracy in determining the fish-preferred key hydrologic habitat variables related to ecosystem health. Taking 5964 fish samples and concurrent hydrological habitat variables as the basis, the combination of key variables of flow-velocity and water-depth were determined and used to drive the Adapted Ecological Hydraulic Radius Approach (AEHRA) to study e-flows in a Chinese urban river impacted by intensive human activities. Results showed that upstream urbanization resulted in abnormal river-course geomorphology and consequently abnormal e-flows under intensive human activities. Selection of key species based on the foodweb and trophic levels of aquatic ecosystems can reflect a comprehensive requirement on e-flows of the whole aquatic ecosystem, which greatly increases its potential to be used as a guidance tool for rehabilitation of degraded ecosystems at large spatial scales. These findings have significant ramifications for catchment e-flows assessment under intensive human activities and for river ecohealth restoration in such rivers globally.

  13. Climate change and tree-line ecosystems in the Sierra Nevada: Habitat suitability modelling to inform high-elevation forest dynamics monitoring

    Science.gov (United States)

    Moore, Peggy E.; Alvarez, Otto; McKinney, Shawn T.; Li, Wenkai; Brooks, Matthew L.; Guo, Qinghua

    2017-01-01

    Whitebark pine and foxtail pine serve foundational roles in the subalpine zone of the Sierra Nevada. They provide the dominant structure in tree-line forests and regulate key ecosystem processes and community dynamics. Climate change models suggest that there will be changes in temperature regimes and in the timing and magnitude of precipitation within the current distribution of these species, and these changes may alter the species’ distributional limits. Other stressors include the non-native pathogen white pine blister rust and mountain pine beetle, which have played a role in the decline of whitebark pine throughout much of its range. The National Park Service is monitoring status and trends of these species. This report provides complementary information in the form of habitat suitability models to predict climate change impacts on the future distribution of these species within Sierra Nevada national parks.We used maximum entropy modeling to build habitat suitability models by relating species occurrence to environmental variables. Species occurrence was available from 328 locations for whitebark pine and 244 for foxtail pine across the species’ distributions within the parks. We constructed current climate surfaces for modeling by interpolating data from weather stations. Climate surfaces included mean, minimum, and maximum temperature and total precipitation for January, April, July, and October. We downscaled five general circulation models for the 2050s and the 2090s from ~125 km2 to 1 km2 under both an optimistic and an extreme climate scenario to bracket potential climatic change and its influence on projected suitable habitat. To describe anticipated changes in the distribution of suitable habitat, we compared, for each species, climate scenario, and time period, the current models with future models in terms of proportional change in habitat size, elevation distribution, model center points, and where habitat is predicted to expand or contract

  14. Silvicolous on a small scale: possibilities and limitations of habitat suitability models for small, elusive mammals in conservation management and landscape planning.

    Science.gov (United States)

    Becker, Nina I; Encarnação, Jorge A

    2015-01-01

    Species distribution and endangerment can be assessed by habitat-suitability modelling. This study addresses methodical aspects of habitat suitability modelling and includes an application example in actual species conservation and landscape planning. Models using species presence-absence data are preferable to presence-only models. In contrast to species presence data, absences are rarely recorded. Therefore, many studies generate pseudo-absence data for modelling. However, in this study model quality was higher with null samples collected in the field. Next to species data the choice of landscape data is crucial for suitability modelling. Landscape data with high resolution and ecological relevance for the study species improve model reliability and quality for small elusive mammals like Muscardinus avellanarius. For large scale assessment of species distribution, models with low-detailed data are sufficient. For regional site-specific conservation issues like a conflict-free site for new wind turbines, high-detailed regional models are needed. Even though the overlap with optimally suitable habitat for M. avellanarius was low, the installation of wind plants can pose a threat due to habitat loss and fragmentation. To conclude, modellers should clearly state the purpose of their models and choose the according level of detail for species and environmental data.

  15. Operational Prediction of the Habitat Suitability Index (HSI) Distribution for Neon Flying Squid in Central North Pacific by Using FORA Dataset and a New Data Assimilation System SKUIDS

    Science.gov (United States)

    Igarashi, H.; Ishikawa, Y.; Wakamatsu, T.; Tanaka, Y.; Nishikawa, S.; Nishikawa, H.; Kamachi, M.; Kuragano, T.; Takatsuki, Y.; Fujii, Y.; Usui, N.; Toyoda, T.; Hirose, N.; Sakai, M.; Saitoh, S. I.; Imamura, Y.

    2016-02-01

    The neon flying squid (Ommastrephes bartramii) has a wide-spread distribution in subtropical and temperate waters in the North Pacific, which plays an important role in the pelagic ecosystem and is one of the major targets in Japanese squid fisheries. The main fishing areas for Japanese commercial vessels are located in the central North Pacific (35-45N, around the date line) in summer. In this study, we have developed several kinds of habitat suitability index (HSI) models of the neon flying squid for investigating the relationship between its potential habitat and the ocean state variations in the target area. For developing HSI models, we have used a new ocean reanalysis dataset FORA (4-dimensional variational Ocean Re-Analysis) produced by JAMSTEC/CEIST and MRI-JMA. The horizontal resolution is 0.1*0.1 degree of latitude and longitude with 54 vertical levels, which can provide realistic fields of 3-dimensional ocean circulation and environmental structures including meso-scale eddies. In addition, we have developed a new 4D-VAR (4-dimensional variational) ocean data assimilation system for predicting ocean environmental changes in the main fishing grounds. We call this system "SKUIDS" (Scalable Kit of Under-sea Information Delivery System). By using these prediction fields of temperature, salinity, sea surface height, horizontal current velocity, we produced daily HSI maps of the neon flying squid, and provided them to the Japanese commercial vessels in operation. Squid fishermen can access the web site for delivering the information of ocean environments in the fishing ground by using Inmarsat satellite communication on board, and show the predicted fields of subsurface temperatures and HSI. Here, we present the details of SKUIDS and the web-delivery system for squid fishery, and some preliminary results of the operational prediction.

  16. A comparative framework to infer landscape effects on population genetic structure: Are habitat suitability models effective in explaining gene flow?

    Science.gov (United States)

    Maria C. Mateo-Sanchez; Niko Balkenhol; Samuel Cushman; Trinidad Perez; Ana Dominguez; Santiago Saura

    2015-01-01

    Most current methods to assess connectivity begin with landscape resistance maps. The prevailing resistance models are commonly based on expert opinion and, more recently, on a direct transformation of habitat suitability. However, habitat associations are not necessarily accurate indicators of dispersal, and thus may fail as a surrogate of resistance to...

  17. Habitat-effectiveness index for elk on Blue Mountain Winter Ranges.

    Science.gov (United States)

    Jack Ward Thomas; Donavin A. Leckenby; Mark Henjum; Richard J. Pedersen; Larry D. Bryant

    1988-01-01

    An elk-habitat evaluation procedure for winter ranges in the Blue Mountains of eastern Oregon and Washington is described. The index is based on an interaction of size and spacing of cover and forage areas, roads open to traffic per unit of area, cover quality, and quantity and quality of forage.

  18. Combining dispersal, landscape connectivity and habitat suitability to assess climate-induced changes in the distribution of Cunningham's skink, Egernia cunninghami.

    Science.gov (United States)

    Ofori, Benjamin Y; Stow, Adam J; Baumgartner, John B; Beaumont, Linda J

    2017-01-01

    The ability of species to track their climate niche is dependent on their dispersal potential and the connectivity of the landscape matrix linking current and future suitable habitat. However, studies modeling climate-driven range shifts rarely address the movement of species across landscapes realistically, often assuming "unlimited" or "no" dispersal. Here, we incorporate dispersal rate and landscape connectivity with a species distribution model (Maxent) to assess the extent to which the Cunningham's skink (Egernia cunninghami) may be capable of tracking spatial shifts in suitable habitat as climate changes. Our model was projected onto four contrasting, but equally plausible, scenarios describing futures that are (relative to now) hot/wet, warm/dry, hot/with similar precipitation and warm/wet, at six time horizons with decadal intervals (2020-2070) and at two spatial resolutions: 1 km and 250 m. The size of suitable habitat was projected to decline 23-63% at 1 km and 26-64% at 250 m, by 2070. Combining Maxent output with the dispersal rate of the species and connectivity of the intervening landscape matrix showed that most current populations in regions projected to become unsuitable in the medium to long term, will be unable to shift the distance necessary to reach suitable habitat. In particular, numerous populations currently inhabiting the trailing edge of the species' range are highly unlikely to be able to disperse fast enough to track climate change. Unless these populations are capable of adaptation they are likely to be extirpated. We note, however, that the core of the species distribution remains suitable across the broad spectrum of climate scenarios considered. Our findings highlight challenges faced by philopatric species and the importance of adaptation for the persistence of peripheral populations under climate change.

  19. Combining dispersal, landscape connectivity and habitat suitability to assess climate-induced changes in the distribution of Cunningham's skink, Egernia cunninghami.

    Directory of Open Access Journals (Sweden)

    Benjamin Y Ofori

    Full Text Available The ability of species to track their climate niche is dependent on their dispersal potential and the connectivity of the landscape matrix linking current and future suitable habitat. However, studies modeling climate-driven range shifts rarely address the movement of species across landscapes realistically, often assuming "unlimited" or "no" dispersal. Here, we incorporate dispersal rate and landscape connectivity with a species distribution model (Maxent to assess the extent to which the Cunningham's skink (Egernia cunninghami may be capable of tracking spatial shifts in suitable habitat as climate changes. Our model was projected onto four contrasting, but equally plausible, scenarios describing futures that are (relative to now hot/wet, warm/dry, hot/with similar precipitation and warm/wet, at six time horizons with decadal intervals (2020-2070 and at two spatial resolutions: 1 km and 250 m. The size of suitable habitat was projected to decline 23-63% at 1 km and 26-64% at 250 m, by 2070. Combining Maxent output with the dispersal rate of the species and connectivity of the intervening landscape matrix showed that most current populations in regions projected to become unsuitable in the medium to long term, will be unable to shift the distance necessary to reach suitable habitat. In particular, numerous populations currently inhabiting the trailing edge of the species' range are highly unlikely to be able to disperse fast enough to track climate change. Unless these populations are capable of adaptation they are likely to be extirpated. We note, however, that the core of the species distribution remains suitable across the broad spectrum of climate scenarios considered. Our findings highlight challenges faced by philopatric species and the importance of adaptation for the persistence of peripheral populations under climate change.

  20. Using habitat suitability models to target invasive plant species surveys.

    Science.gov (United States)

    Crall, Alycia W; Jarnevich, Catherine S; Panke, Brendon; Young, Nick; Renz, Mark; Morisette, Jeffrey

    2013-01-01

    Managers need new tools for detecting the movement and spread of nonnative, invasive species. Habitat suitability models are a popular tool for mapping the potential distribution of current invaders, but the ability of these models to prioritize monitoring efforts has not been tested in the field. We tested the utility of an iterative sampling design (i.e., models based on field observations used to guide subsequent field data collection to improve the model), hypothesizing that model performance would increase when new data were gathered from targeted sampling using criteria based on the initial model results. We also tested the ability of habitat suitability models to predict the spread of invasive species, hypothesizing that models would accurately predict occurrences in the field, and that the use of targeted sampling would detect more species with less sampling effort than a nontargeted approach. We tested these hypotheses on two species at the state scale (Centaurea stoebe and Pastinaca sativa) in Wisconsin (USA), and one genus at the regional scale (Tamarix) in the western United States. These initial data were merged with environmental data at 30-m2 resolution for Wisconsin and 1-km2 resolution for the western United States to produce our first iteration models. We stratified these initial models to target field sampling and compared our models and success at detecting our species of interest to other surveys being conducted during the same field season (i.e., nontargeted sampling). Although more data did not always improve our models based on correct classification rate (CCR), sensitivity, specificity, kappa, or area under the curve (AUC), our models generated from targeted sampling data always performed better than models generated from nontargeted data. For Wisconsin species, the model described actual locations in the field fairly well (kappa = 0.51, 0.19, P guiding invasive species monitoring, and we support the use of an iterative sampling design for

  1. Spatial transferability of habitat suitability models of Nephrops norvegicus among fished areas in the Northeast Atlantic: sufficiently stable for marine resource conservation?

    Directory of Open Access Journals (Sweden)

    Valentina Lauria

    Full Text Available Knowledge of the spatial distribution and habitat associations of species in relation to the environment is essential for their management and conservation. Habitat suitability models are useful in quantifying species-environment relationships and predicting species distribution patterns. Little is known, however, about the stability and performance of habitat suitability models when projected into new areas (spatial transferability and how this can inform resource management. The aims of this study were to model habitat suitability of Norway lobster (Nephrops norvegicus in five fished areas of the Northeast Atlantic (Aran ground, Irish Sea, Celtic Sea, Scotland Inshore and Fladen ground, and to test for spatial transferability of habitat models among multiple regions. Nephrops burrow density was modelled using generalised additive models (GAMs with predictors selected from four environmental variables (depth, slope, sediment and rugosity. Models were evaluated and tested for spatial transferability among areas. The optimum models (lowest AICc for different areas always included depth and sediment as predictors. Burrow densities were generally greater at depth and in finer sediments, but relationships for individual areas were sometimes more complex. Aside from an inclusion of depth and sediment, the optimum models differed between fished areas. When it came to tests of spatial transferability, however, most of the models were able to predict Nephrops density in other areas. Furthermore, transferability was not dependent on use of the optimum models since competing models were also able to achieve a similar level of transferability to new areas. A degree of decoupling between model 'fitting' performance and spatial transferability supports the use of simpler models when extrapolating habitat suitability maps to different areas. Differences in the form and performance of models from different areas may supply further information on the processes

  2. Combining dispersal, landscape connectivity and habitat suitability to assess climate-induced changes in the distribution of Cunningham’s skink, Egernia cunninghami

    Science.gov (United States)

    Stow, Adam J.; Baumgartner, John B.; Beaumont, Linda J.

    2017-01-01

    The ability of species to track their climate niche is dependent on their dispersal potential and the connectivity of the landscape matrix linking current and future suitable habitat. However, studies modeling climate-driven range shifts rarely address the movement of species across landscapes realistically, often assuming “unlimited” or “no” dispersal. Here, we incorporate dispersal rate and landscape connectivity with a species distribution model (Maxent) to assess the extent to which the Cunningham’s skink (Egernia cunninghami) may be capable of tracking spatial shifts in suitable habitat as climate changes. Our model was projected onto four contrasting, but equally plausible, scenarios describing futures that are (relative to now) hot/wet, warm/dry, hot/with similar precipitation and warm/wet, at six time horizons with decadal intervals (2020–2070) and at two spatial resolutions: 1 km and 250 m. The size of suitable habitat was projected to decline 23–63% at 1 km and 26–64% at 250 m, by 2070. Combining Maxent output with the dispersal rate of the species and connectivity of the intervening landscape matrix showed that most current populations in regions projected to become unsuitable in the medium to long term, will be unable to shift the distance necessary to reach suitable habitat. In particular, numerous populations currently inhabiting the trailing edge of the species’ range are highly unlikely to be able to disperse fast enough to track climate change. Unless these populations are capable of adaptation they are likely to be extirpated. We note, however, that the core of the species distribution remains suitable across the broad spectrum of climate scenarios considered. Our findings highlight challenges faced by philopatric species and the importance of adaptation for the persistence of peripheral populations under climate change. PMID:28873398

  3. Upward Altitudinal Shifts in Habitat Suitability of Mountain Vipers since the Last Glacial Maximum.

    Directory of Open Access Journals (Sweden)

    Masoud Yousefi

    Full Text Available We determined the effects of past and future climate changes on the distribution of the Montivipera raddei species complex (MRC that contains rare and endangered viper species limited to Iran, Turkey and Armenia. We also investigated the current distribution of MRC to locate unidentified isolated populations as well as to evaluate the effectiveness of the current network of protected areas for their conservation. Present distribution of MRC was modeled based on ecological variables and model performance was evaluated by field visits. Some individuals at the newly identified populations showed uncommon morphological characteristics. The distribution map of MRC derived through modeling was then compared with the distribution of protected areas in the region. We estimated the effectiveness of the current protected area network to be 10%, which would be sufficient for conserving this group of species, provided adequate management policies and practices are employed. We further modeled the distribution of MRC in the past (21,000 years ago and under two scenarios in the future (to 2070. These models indicated that climatic changes probably have been responsible for an upward shift in suitable habitats of MRC since the Last Glacial Maximum, leading to isolation of allopatric populations. Distribution will probably become much more restricted in the future as a result of the current rate of global warming. We conclude that climate change most likely played a major role in determining the distribution pattern of MRC, restricting allopatric populations to mountaintops due to habitat alterations. This long-term isolation has facilitated unique local adaptations among MRC populations, which requires further investigation. The suitable habitat patches identified through modeling constitute optimized solutions for inclusion in the network of protected areas in the region.

  4. Habitat Evaluation Procedures (HEP) Report; Gamblin Lake, Technical Report 2005.

    Energy Technology Data Exchange (ETDEWEB)

    Entz, Ray

    2005-05-01

    On August 12, 2003, the Habitat Evaluation Procedure (HEP) was used to determine baseline habitat suitability on the Gamblin Lake property, an acquisition completed by the Kalispel Tribe of Indians in December 2002. Evaluation species and appropriate models include bald eagle, black-capped chickadee, mallard, muskrat, and white-tailed deer. Habitat Suitability Index (HSI) values were visually estimated and agreed upon by all HEP team members. The Gamblin Lake Project provides a total of 273.28 Habitat Units (HUs) for the species evaluated. Conifer forest habitat provides 127.92 HUs for bald eagle, black-capped chickadee, mallard, and white-tailed deer. Forested wetland habitat provides 21.06 HUs for bald eagle, black-caped chickadee, mallard, and white-tailed deer. Wet meadow provides 78.05 HUs for Canada goose and mallard. Emergent wetland habitat provides 46.25 HUs for mallard, muskrat, and Canada goose. The objective of using HEP at the Gamblin Lake Project and other protected properties is to document the quality and quantity of available habitat for selected wildlife species. In this way, HEP provides information on the relative value of the same area at future points in time so that the effect of management activities on wildlife habitat can be quantified. When combined with other tools, the baseline HEP will be used to determine the most effective on-site management, restoration, and enhancement actions to increase habitat suitability for targeted species. The same process will be replicated every five years to quantitatively evaluate the effectiveness of management strategies in improving and maintaining habitat conditions while providing additional crediting to BPA for enhanced habitat values.

  5. A Candidate Vegetation Index of Biological Integrity Based on Species Dominance and Habitat Fidelity

    Science.gov (United States)

    Gara, Brian D; Stapanian, Martin A.

    2015-01-01

    Indices of biological integrity of wetlands based on vascular plants (VIBIs) have been developed in many areas of the USA and are used in some states to make critical management decisions. An underlying concept of all VIBIs is that they respond negatively to disturbance. The Ohio VIBI (OVIBI) is calculated from 10 metrics, which are different for each wetland vegetation class. We present a candidate vegetation index of biotic integrity based on floristic quality (VIBI-FQ) that requires only two metrics to calculate an overall score regardless of vegetation class. These metrics focus equally on the critical ecosystem elements of diversity and dominance as related to a species’ degree of fidelity to habitat requirements. The indices were highly correlated but varied among vegetation classes. Both indices responded negatively with a published index of wetland disturbance in 261 Ohio wetlands. Unlike VIBI-FQ, however, errors in classifying wetland vegetation may lead to errors in calculating OVIBI scores. This is especially critical when assessing the ecological condition of rapidly developing ecosystems typically associated with wetland restoration and creation projects. Compared to OVIBI, the VIBI-FQ requires less field work, is much simpler to calculate and interpret, and can potentially be applied to all habitat types. This candidate index, which has been “standardized” across habitats, would make it easier to prioritize funding because it would score the “best” and “worst” of all habitats appropriately and allow for objective comparison across different vegetation classes.

  6. Habitat Evaluation Procedures (HEP) Report : West Beaver Lake, 2004-2005 Technical Report.

    Energy Technology Data Exchange (ETDEWEB)

    Entz, Ray

    2005-02-01

    On September 7, 2004, the Habitat Evaluation Procedure (HEP) was used to determine baseline habitat suitability on the West Beaver Lake property, an acquisition completed by the Kalispel Tribe of Indians in September 2004. Evaluation species and appropriate models include bald eagle, black-capped chickadee, mallard, muskrat, and white-tailed deer. Habitat Suitability Index (HSI) values were visually estimated and agreed upon by all HEP team members. The West Beaver Lake Project provides a total of 103.08 Habitat Units (HUs) for the species evaluated. Emergent wetland habitat provides 7.17 HUs for mallard and muskrat. Conifer forest habitat provides 95.91 HUs for bald eagle, black-capped chickadee, mallard, and white-tailed deer. The objective of using HEP at the West Beaver Lake Project and other protected properties is to document the quality and quantity of available habitat for selected wildlife species. In this way, HEP provides information on the relative value of the same area at future points in time so that the effect of management activities on wildlife habitat can be quantified. When combined with other tools, the baseline HEP will be used to determine the most effective on-site management, restoration, and enhancement actions to increase habitat suitability for targeted species. The same process will be replicated every five years to quantitatively evaluate the effectiveness of management strategies in improving and maintaining habitat conditions while providing additional crediting to BPA for enhanced habitat values.

  7. Deep-Sea Soft Coral Habitat Suitability

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Deep-sea corals, also known as cold water corals, create complex communities that provide habitat for a variety of invertebrate and fish species, such as grouper,...

  8. Deep-Sea Stony Coral Habitat Suitability

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Deep-sea corals, also known as cold water corals, create complex communities that provide habitat for a variety of invertebrate and fish species, such as grouper,...

  9. Agricultural utilisation and potential suitability of the Sysľovské polia Special Protection Area (south-western Slovakia landscape in relation to the habitat requirements of the red-footed falcon (Falco vespertinus

    Directory of Open Access Journals (Sweden)

    Zemko Martin

    2017-12-01

    Full Text Available Intensification of land use in an agricultural landscape significantly affects biodiversity also in protected areas. This can be observed in the Sysľovské polia Special Protection Area in relation to the occurrence of the red-footed falcon (Falco vespertinus. The objective of this study was to evaluate the landscape structure and suitability of agrotechnical procedures for the habitat demands of this species in the course of the period from 2004 until 2017. The utilisation was assessed on the basis of four landscape elements representation in 1949 and 2017. The next step was analysis of landscape patches. The aim was to quantify the diversity and the spatial structure of the landscape mosaic using Shannon’s Diversity Index and Evenness Index as well as Simpson’s Diversity Index and Evenness Index and spatial pattern analysis in the Fragstats software programme. Assessment of crop suitability was carried out according to the following criteria: representation of positive/negative agricultural crops, diversity of crops in crop rotation, and (non-observance of crop rotation. It was found that the agricultural landscape use did not change significantly. The study area has been used as an intensively-farmed agricultural landscape for a long time. The landscape elements have remained almost identical, with dominance of arable land. Differences emerged in the analysis of the micropatches, which are represented by natural hedgerows consisting of various species of trees, shrubs and grasses. The results show a decrease in the diversity of patches and changes in the structure of the landscape patches, which may be important in terms of the preservation of the habitat of fauna which form an important part of the F vespertinus diet. On the basis of the evaluation of the suitability of agricultural crop growing, we found that there were some areas showing negative values in all the criteria, and thus they require changes in the crop rotation focusing

  10. Development and field validation of a regional, management-scale habitat model: A koala Phascolarctos cinereus case study.

    Science.gov (United States)

    Law, Bradley; Caccamo, Gabriele; Roe, Paul; Truskinger, Anthony; Brassil, Traecey; Gonsalves, Leroy; McConville, Anna; Stanton, Matthew

    2017-09-01

    Species distribution models have great potential to efficiently guide management for threatened species, especially for those that are rare or cryptic. We used MaxEnt to develop a regional-scale model for the koala Phascolarctos cinereus at a resolution (250 m) that could be used to guide management. To ensure the model was fit for purpose, we placed emphasis on validating the model using independently-collected field data. We reduced substantial spatial clustering of records in coastal urban areas using a 2-km spatial filter and by modeling separately two subregions separated by the 500-m elevational contour. A bias file was prepared that accounted for variable survey effort. Frequency of wildfire, soil type, floristics and elevation had the highest relative contribution to the model, while a number of other variables made minor contributions. The model was effective in discriminating different habitat suitability classes when compared with koala records not used in modeling. We validated the MaxEnt model at 65 ground-truth sites using independent data on koala occupancy (acoustic sampling) and habitat quality (browse tree availability). Koala bellows ( n  = 276) were analyzed in an occupancy modeling framework, while site habitat quality was indexed based on browse trees. Field validation demonstrated a linear increase in koala occupancy with higher modeled habitat suitability at ground-truth sites. Similarly, a site habitat quality index at ground-truth sites was correlated positively with modeled habitat suitability. The MaxEnt model provided a better fit to estimated koala occupancy than the site-based habitat quality index, probably because many variables were considered simultaneously by the model rather than just browse species. The positive relationship of the model with both site occupancy and habitat quality indicates that the model is fit for application at relevant management scales. Field-validated models of similar resolution would assist in

  11. Predicted effects of future climate warming on thermal habitat suitability for Lake Sturgeon (Acipenser fulvescens, Rafinesque, 1817) in rivers in Wisconsin, USA

    Science.gov (United States)

    Lyons, John D.; Stewart, Jana S.

    2015-01-01

    The Lake Sturgeon (Acipenser fulvescens, Rafinesque, 1817) may be threatened by future climate warming. The purpose of this study was to identify river reaches in Wisconsin, USA, where they might be vulnerable to warming water temperatures. In Wisconsin, A. fulvescens is known from 2291 km of large-river habitat that has been fragmented into 48 discrete river-lake networks isolated by impassable dams. Although the exact temperature tolerances are uncertain, water temperatures above 28–30°C are potentially less suitable for this coolwater species. Predictions from 13 downscaled global climate models were input to a lotic water temperature model to estimate amounts of potential thermally less-suitable habitat at present and for 2046–2065. Currently, 341 km (14.9%) of the known habitat are estimated to regularly exceed 28°C for an entire day, but only 6 km (0.3%) to exceed 30°C. In 2046–2065, 685–2164 km (29.9–94.5%) are projected to exceed 28°C and 33–1056 km (1.4–46.1%) to exceed 30°C. Most river-lake networks have cooler segments, large tributaries, or lakes that might provide temporary escape from potentially less suitable temperatures, but 12 short networks in the Lower Fox and Middle Wisconsin rivers totaling 93.6 km are projected to have no potential thermal refugia. One possible adaptation to climate change could be to provide fish passage or translocation so that riverine Lake Sturgeon might have access to more thermally suitable habitats.

  12. Habitat Evaluation Procedures (HEP) Report; Calispell Creek Project, Technical Report 2004-2005.

    Energy Technology Data Exchange (ETDEWEB)

    Entz, Ray

    2005-02-01

    On July 13, 2004, the Habitat Evaluation Procedure (HEP) was used to determine baseline habitat suitability on the Calispell Creek property, an acquisition completed by the Kalispel Tribe of Indians in February 2004. Evaluation species and appropriate models include Canada goose, mallard, muskrat, yellow warbler, and white-tailed deer. Habitat Suitability Index (HSI) values were visually estimated and agreed upon by all HEP team members. The Calispell Creek Project provides a total of 138.17 Habitat Units (HUs) for the species evaluated. Emergent wetland habitat provides 5.16 HUs for mallard and muskrat. Grassland provides 132.02 HUs for mallard and Canada goose. Scrub-shrub vegetation provides 0.99 HUs for yellow warbler and white-tailed deer. The objective of using HEP at the Calispell Creek Project and other protected properties is to document the quality and quantity of available habitat for selected wildlife species. In this way, HEP provides information on the relative value of the same area at future points in time so that the effect of management activities on wildlife habitat can be quantified. When combined with other tools, the baseline HEP will be used to determine the most effective on-site management, restoration, and enhancement actions to increase habitat suitability for targeted species. The same process will be replicated every five years to quantitatively evaluate the effectiveness of management strategies in improving and maintaining habitat conditions while providing additional crediting to BPA for enhanced habitat values.

  13. Modeling and Validation of Environmental Suitability for Schistosomiasis Transmission Using Remote Sensing.

    Science.gov (United States)

    Walz, Yvonne; Wegmann, Martin; Dech, Stefan; Vounatsou, Penelope; Poda, Jean-Noël; N'Goran, Eliézer K; Utzinger, Jürg; Raso, Giovanna

    2015-11-01

    Schistosomiasis is the most widespread water-based disease in sub-Saharan Africa. Transmission is governed by the spatial distribution of specific freshwater snails that act as intermediate hosts and human water contact patterns. Remote sensing data have been utilized for spatially explicit risk profiling of schistosomiasis. We investigated the potential of remote sensing to characterize habitat conditions of parasite and intermediate host snails and discuss the relevance for public health. We employed high-resolution remote sensing data, environmental field measurements, and ecological data to model environmental suitability for schistosomiasis-related parasite and snail species. The model was developed for Burkina Faso using a habitat suitability index (HSI). The plausibility of remote sensing habitat variables was validated using field measurements. The established model was transferred to different ecological settings in Côte d'Ivoire and validated against readily available survey data from school-aged children. Environmental suitability for schistosomiasis transmission was spatially delineated and quantified by seven habitat variables derived from remote sensing data. The strengths and weaknesses highlighted by the plausibility analysis showed that temporal dynamic water and vegetation measures were particularly useful to model parasite and snail habitat suitability, whereas the measurement of water surface temperature and topographic variables did not perform appropriately. The transferability of the model showed significant relations between the HSI and infection prevalence in study sites of Côte d'Ivoire. A predictive map of environmental suitability for schistosomiasis transmission can support measures to gain and sustain control. This is particularly relevant as emphasis is shifting from morbidity control to interrupting transmission. Further validation of our mechanistic model needs to be complemented by field data of parasite- and snail

  14. Modeling suitable habitat of invasive red lionfish Pterois volitans (Linnaeus, 1758) in North and South America’s coastal waters

    Science.gov (United States)

    Evangelista, Paul H.; Young, Nicholas E.; Schofield, Pamela J.; Jarnevich, Catherine S.

    2016-01-01

    We used two common correlative species-distribution models to predict suitable habitat of invasive red lionfish Pterois volitans (Linnaeus, 1758) in the western Atlantic and eastern Pacific Oceans. The Generalized Linear Model (GLM) and the Maximum Entropy (Maxent) model were applied using the Software for Assisted Habitat Modeling. We compared models developed using native occurrences, using non-native occurrences, and using both native and non-native occurrences. Models were trained using occurrence data collected before 2010 and evaluated with occurrence data collected from the invaded range during or after 2010. We considered a total of 22 marine environmental variables. Models built with non-native only or both native and non-native occurrence data outperformed those that used only native occurrences. Evaluation metrics based on the independent test data were highest for models that used both native and non-native occurrences. Bathymetry was the strongest environmental predictor for all models and showed increasing suitability as ocean floor depth decreased, with salinity ranking the second strongest predictor for models that used native and both native and non-native occurrences, indicating low habitat suitability for salinities lionfish could continue to invade southern latitudes in the western Atlantic Ocean and may establish localized populations in the eastern Pacific Ocean. We reiterate the importance in the choice of the training data source (native, non-native, or native/non-native) used to develop correlative species distribution models for invasive species.

  15. Habitat Evaluation Procedures (HEP) Report; Priest River Project, Technical Report 2005.

    Energy Technology Data Exchange (ETDEWEB)

    Entz, Ray

    2005-05-01

    On July 6, 2004, the Habitat Evaluation Procedure (HEP) was used to determine baseline habitat suitability on the Priest River property, an acquisition completed by the Kalispel Tribe of Indians in 2001. Evaluation species and appropriate models include bald eagle, black-capped chickadee, Canada goose, mallard, yellow warbler, and white-tailed deer. Habitat Suitability Index (HSI) values were visually estimated and agreed upon by all HEP team members. The Priest River Project provides a total of 140.73 Habitat Units (HUs) for the species evaluated. Conifer forest habitat provides 60.05 HUs for bald eagle, black-capped chickadee, and white-tailed deer. Grassland meadow habitat provides 7.39 HUs for Canada goose and mallard. Scrub-shrub vegetation provides 71.13 HUs for mallard, yellow warbler, and white-tailed deer. Open water habitat provides 2.16 HUs for Canada goose and mallard. The objective of using HEP at the Priest River Project and other protected properties is to document the quality and quantity of available habitat for selected wildlife species. In this way, HEP provides information on the relative value of the same area at future points in time so that the effect of management activities on wildlife habitat can be quantified. When combined with other tools, the baseline HEP will be used to determine the most effective on-site management, restoration, and enhancement actions to increase habitat suitability for targeted species. The same process will be replicated every five years to quantitatively evaluate the effectiveness of management strategies in improving and maintaining habitat conditions while providing additional crediting to BPA for enhanced habitat values.

  16. Habitat Evaluation Procedures (HEP) Report; North Eaton Lake, Technical Report 2005.

    Energy Technology Data Exchange (ETDEWEB)

    Entz, Ray

    2005-11-01

    On July 6, 2005, the Habitat Evaluation Procedure (HEP) was used to determine baseline habitat suitability on the North Eaton Lake property, an acquisition completed by the Kalispel Tribe of Indians in November 2004. Evaluation species and appropriate models include bald eagle, black-capped chickadee, Canada goose, mallard, muskrat, and white-tailed deer. Habitat Suitability Index (HSI) values were visually estimated and agreed upon by all HEP team members. The North Eaton Lake Project provides a total of 235.05 Habitat Units (HUs) for the species evaluated. Open water habitat provides 9.38 HUs for Canada goose, mallard and muskrat. Emergent wetland habitat provides 11.36 HUs for Canada goose, mallard and muskrat. Forested wetland provides 10.97 HUs for bald eagle, black-capped chickadee, mallard and white-tailed deer. Conifer forest habitat provides 203.34 HUs for bald eagle, black-capped chickadee, mallard, and white-tailed deer. The objective of using HEP at the North Eaton Lake Project and other protected properties is to document the quality and quantity of available habitat for selected wildlife species. In this way, HEP provides information on the relative value of the same area at future points in time so that the effect of management activities on wildlife habitat can be quantified. When combined with other tools, the baseline HEP will be used to determine the most effective on-site management, restoration, and enhancement actions to increase habitat suitability for targeted species. The same process will be replicated every five years to quantitatively evaluate the effectiveness of management strategies in improving and maintaining habitat conditions while providing additional crediting to BPA for enhanced habitat values.

  17. Habitat Evaluation Procedures (HEP) Report; Beaver Lake, Technical Report 2005.

    Energy Technology Data Exchange (ETDEWEB)

    Entz, Ray

    2005-05-01

    On August 14, 2003, the Habitat Evaluation Procedure (HEP) was used to determine baseline habitat suitability on the Beaver Lake property, an acquisition completed by the Kalispel Tribe of Indians in November 2002. Evaluation species and appropriate models include bald eagle, black-capped chickadee, Canada goose, mallard, muskrat, yellow warbler, and white-tailed deer. Habitat Suitability Index (HSI) values were visually estimated and agreed upon by all HEP team members. The Beaver Lake Project provides a total of 232.26 Habitat Units (HUs) for the species evaluated. Conifer forest habitat provides 136.58 HUs for bald eagle, black-capped chickadee, mallard, and white-tailed deer. Forested wetland habitat provides 20.02 HUs for bald eagle, black-caped chickadee, mallard, and white-tailed deer. Scrub-shrub wetland habitat provides 7.67 HUs for mallard, yellow warbler, and white-tailed deer. Grassland meadow provides 22.69 HUs for Canada goose and mallard. Emergent wetlands provide 35.04 HUs for Canada goose, mallard, and muskrat. Open water provided 10.26 HUs for Canada goose, mallard, and muskrat. The objective of using HEP at the Beaver Lake Project and other protected properties is to document the quality and quantity of available habitat for selected wildlife species. In this way, HEP provides information on the relative value of the same area at future points in time so that the effect of management activities on wildlife habitat can be quantified. When combined with other tools, the baseline HEP will be used to determine the most effective on-site management, restoration, and enhancement actions to increase habitat suitability for targeted species. The same process will be replicated every five years to quantitatively evaluate the effectiveness of management strategies in improving and maintaining habitat conditions while providing additional crediting to BPA for enhanced habitat values.

  18. Habitat Evaluation Procedures (HEP) Report; West Beaver Lake Project, Technical Report 2005

    Energy Technology Data Exchange (ETDEWEB)

    Entz, Ray

    2005-05-01

    On September 7, 2004, the Habitat Evaluation Procedure (HEP) was used to determine baseline habitat suitability on the West Beaver Lake property, an acquisition completed by the Kalispel Tribe of Indians in September 2004. Evaluation species and appropriate models include bald eagle, black-capped chickadee, mallard, muskrat, and white-tailed deer. Habitat Suitability Index (HSI) values were visually estimated and agreed upon by all HEP team members. The West Beaver Lake Project provides a total of 82.69 Habitat Units (HUs) for the species evaluated. Emergent wetland habitat provides 8.80 HUs for mallard, muskrat, and Canada goose. Conifer forest habitat provides 70.33 HUs for bald eagle, black-capped chickadee, mallard, and white-tailed deer. Open water provides 3.30 HUs for mallard, muskrat, and Canada goose. The objective of using HEP at the West Beaver Lake Project and other protected properties is to document the quality and quantity of available habitat for selected wildlife species. In this way, HEP provides information on the relative value of the same area at future points in time so that the effect of management activities on wildlife habitat can be quantified. When combined with other tools, the baseline HEP will be used to determine the most effective on-site management, restoration, and enhancement actions to increase habitat suitability for targeted species. The same process will be replicated every five years to quantitatively evaluate the effectiveness of management strategies in improving and maintaining habitat conditions while providing additional crediting to BPA for enhanced habitat values.

  19. Deep-sea benthic megafaunal habitat suitability modelling: A global-scale maximum entropy model for xenophyophores

    Science.gov (United States)

    Ashford, Oliver S.; Davies, Andrew J.; Jones, Daniel O. B.

    2014-12-01

    Xenophyophores are a group of exclusively deep-sea agglutinating rhizarian protozoans, at least some of which are foraminifera. They are an important constituent of the deep-sea megafauna that are sometimes found in sufficient abundance to act as a significant source of habitat structure for meiofaunal and macrofaunal organisms. This study utilised maximum entropy modelling (Maxent) and a high-resolution environmental database to explore the environmental factors controlling the presence of Xenophyophorea and two frequently sampled xenophyophore species that are taxonomically stable: Syringammina fragilissima and Stannophyllum zonarium. These factors were also used to predict the global distribution of each taxon. Areas of high habitat suitability for xenophyophores were highlighted throughout the world's oceans, including in a large number of areas yet to be suitably sampled, but the Northeast and Southeast Atlantic Ocean, Gulf of Mexico and Caribbean Sea, the Red Sea and deep-water regions of the Malay Archipelago represented particular hotspots. The two species investigated showed more specific habitat requirements when compared to the model encompassing all xenophyophore records, perhaps in part due to the smaller number and relatively more clustered nature of the presence records available for modelling at present. The environmental variables depth, oxygen parameters, nitrate concentration, carbon-chemistry parameters and temperature were of greatest importance in determining xenophyophore distributions, but, somewhat surprisingly, hydrodynamic parameters were consistently shown to have low importance, possibly due to the paucity of well-resolved global hydrodynamic datasets. The results of this study (and others of a similar type) have the potential to guide further sample collection, environmental policy, and spatial planning of marine protected areas and industrial activities that impact the seafloor, particularly those that overlap with aggregations of

  20. Evaluating methods to establish habitat suitability criteria: A case study in the upper Delaware River Basin, USA

    Science.gov (United States)

    Galbraith, Heather S.; Blakeslee, Carrie J.; Cole, Jeffrey C.; Talbert, Colin; Maloney, Kelly O.

    2016-01-01

    Defining habitat suitability criteria (HSC) of aquatic biota can be a key component to environmental flow science. HSC can be developed through numerous methods; however, few studies have evaluated the consistency of HSC developed by different methodologies. We directly compared HSC for depth and velocity developed by the Delphi method (expert opinion) and by two primary literature meta-analyses (literature-derived range and interquartile range) to assess whether these independent methods produce analogous criteria for multiple species (rainbow trout, brown trout, American shad, and shallow fast guild) and life stages. We further evaluated how these two independently developed HSC affect calculations of habitat availability under three alternative reservoir management scenarios in the upper Delaware River at a mesohabitat (main channel, stream margins, and flood plain), reach, and basin scale. In general, literature-derived HSC fell within the range of the Delphi HSC, with highest congruence for velocity habitat. Habitat area predicted using the Delphi HSC fell between the habitat area predicted using two literature-derived HSC, both at the basin and the site scale. Predicted habitat increased in shallow regions (stream margins and flood plain) using literature-derived HSC while Delphi-derived HSC predicted increased channel habitat. HSC generally favoured the same reservoir management scenario; however, no favoured reservoir management scenario was the most common outcome when applying the literature range HSC. The differences found in this study lend insight into how different methodologies can shape HSC and their consequences for predicted habitat and water management decisions. Published 2016. This article is a U.S. Government work and is in the public domain in the USA.

  1. Habitat Evaluation Procedures (HEP) Report; Upper Trimble Project, Technical Report 2004-2005.

    Energy Technology Data Exchange (ETDEWEB)

    Entz, Ray

    2005-02-01

    On July 13, 2004, the Habitat Evaluation Procedure (HEP) was used to determine baseline habitat suitability on the Upper Trimble property, an acquisition completed by the Kalispel Tribe of Indians in March 2004. Evaluation species and appropriate models include bald eagle, black-capped chickadee, Canada goose, mallard, muskrat, yellow warbler, and white-tailed deer. Habitat Suitability Index (HSI) values were visually estimated and agreed upon by all HEP team members. The Upper Trimble Project provides a total of 250.67 Habitat Units (HUs) for the species evaluated. Wet meadow provides 136.92 HUs for mallard, muskrat, and Canada goose. Mixed forest habitat provides 111.88 HUs for bald eagle, black-capped chickadee, mallard, and white-tailed deer. Scrub-shrub vegetation provides 1.87 HUs for yellow warbler, and white-tailed deer. The objective of using HEP at the Upper Trimble Project and other protected properties is to document the quality and quantity of available habitat for selected wildlife species. In this way, HEP provides information on the relative value of the same area at future points in time so that the effect of management activities on wildlife habitat can be quantified. When combined with other tools, the baseline HEP will be used to determine the most effective on-site management, restoration, and enhancement actions to increase habitat suitability for targeted species. The same process will be replicated every five years to quantitatively evaluate the effectiveness of management strategies in improving and maintaining habitat conditions while providing additional crediting to BPA for enhanced habitat values.

  2. Assessing three fish species ecological status in Colorado River, Grand Canyon based on physical habitat and population models.

    Science.gov (United States)

    Yao, Weiwei; Chen, Yuansheng

    2018-04-01

    Colorado River is a unique ecosystem and provides important ecological services such as habitat for fish species as well as water power energy supplies. River management for this ecosystem requires assessment and decision support tools for fish which involves protecting, restoring as well as forecasting of future conditions. In this paper, a habitat and population model was developed and used to determine the levels of fish habitat suitability and population density in Colorado River between Lees Ferry and Lake Mead. The short term target fish populations are also predicted based on native fish recovery strategy. This model has been developed by combining hydrodynamics, heat transfer and sediment transport models with a habitat suitability index model and then coupling with habitat model into life stage population model. The fish were divided into four life stages according to the fish length. Three most abundant and typical native and non-native fish were selected as target species, which are rainbow trout (Oncorhynchus mykiss), brown trout (Salmo trutta) and flannelmouth sucker (Catostomus latipinnis). Flow velocity, water depth, water temperature and substrates were used as the suitability indicators in habitat model and overall suitability index (OSI) as well as weight usable area (WUA) was used as an indicator in population model. A comparison was made between simulated fish population alteration and surveyed fish number fluctuation during 2000 to 2009. The application of this habitat and population model indicates that this model can be accurate present habitat situation and targets fish population dynamics of in the study areas. The analysis also indicates the flannelmouth sucker population will steadily increase while the rainbow trout will decrease based on the native fish recovery scheme. Copyright © 2018. Published by Elsevier Inc.

  3. Global decline in suitable habitat for Angiostrongylus ( = Parastrongylus cantonensis: the role of climate change.

    Directory of Open Access Journals (Sweden)

    Emily M York

    Full Text Available Climate change is implicated in the alteration of the ranges of species worldwide. Such shifts in species distributions may introduce parasites/pathogens, hosts, and vectors associated with disease to new areas. The parasite Angiostrongylus ( = Parastrongylus cantonensis is an invasive species that causes eosinophilic meningitis in humans and neurological abnormalities in domestic/wild animals. Although native to southeastern Asia, A. cantonensis has now been reported from more than 30 countries worldwide. Given the health risks, it is important to describe areas with potentially favorable climate for the establishment of A. cantonensis, as well as areas where this pathogen might become established in the future. We used the program Maxent to develop an ecological niche model for A. cantonensis based on 86 localities obtained from published literature. We then modeled areas of potential A. cantonensis distribution as well as areas projected to have suitable climatic conditions under four Representative Concentration Pathways (RCP scenarios by the 2050s and the 2070s. The best model contained three bioclimatic variables: mean diurnal temperature range, minimum temperature of coldest month and precipitation of warmest quarter. Potentially suitable habitat for A. cantonensis was located worldwide in tropical and subtropical regions. Under all climate change RCP scenarios, the center of the projected distribution shifted away from the equator at a rate of 68-152 km per decade. However, the extent of areas with highly suitable habitat (>50% declined by 10.66-15.66% by the 2050s and 13.11-16.11% by the 2070s. These results conflict with previous studies, which have generally found that the prevalence of tropical pathogens will increase during the 21st century. Moreover, it is likely that A. cantonensis will continue to expand its current range in the near future due to introductions and host expansion, whereas climate change will reduce the total

  4. Global decline in suitable habitat for Angiostrongylus ( = Parastrongylus) cantonensis: the role of climate change.

    Science.gov (United States)

    York, Emily M; Butler, Christopher J; Lord, Wayne D

    2014-01-01

    Climate change is implicated in the alteration of the ranges of species worldwide. Such shifts in species distributions may introduce parasites/pathogens, hosts, and vectors associated with disease to new areas. The parasite Angiostrongylus ( = Parastrongylus) cantonensis is an invasive species that causes eosinophilic meningitis in humans and neurological abnormalities in domestic/wild animals. Although native to southeastern Asia, A. cantonensis has now been reported from more than 30 countries worldwide. Given the health risks, it is important to describe areas with potentially favorable climate for the establishment of A. cantonensis, as well as areas where this pathogen might become established in the future. We used the program Maxent to develop an ecological niche model for A. cantonensis based on 86 localities obtained from published literature. We then modeled areas of potential A. cantonensis distribution as well as areas projected to have suitable climatic conditions under four Representative Concentration Pathways (RCP) scenarios by the 2050s and the 2070s. The best model contained three bioclimatic variables: mean diurnal temperature range, minimum temperature of coldest month and precipitation of warmest quarter. Potentially suitable habitat for A. cantonensis was located worldwide in tropical and subtropical regions. Under all climate change RCP scenarios, the center of the projected distribution shifted away from the equator at a rate of 68-152 km per decade. However, the extent of areas with highly suitable habitat (>50%) declined by 10.66-15.66% by the 2050s and 13.11-16.11% by the 2070s. These results conflict with previous studies, which have generally found that the prevalence of tropical pathogens will increase during the 21st century. Moreover, it is likely that A. cantonensis will continue to expand its current range in the near future due to introductions and host expansion, whereas climate change will reduce the total geographic area of

  5. Habitat Evaluation Procedures (HEP) Report; Carey Creek, Technical Report 2005.

    Energy Technology Data Exchange (ETDEWEB)

    Entz, Ray

    2005-05-01

    In August 2002, the Habitat Evaluation Procedure (HEP) was used to determine baseline habitat suitability on the Carey Creek property, an acquisition completed by the Kalispel Tribe of Indians in December 2001. Evaluation species and appropriate models include bald eagle, black-capped chickadee, Canada goose, mallard, yellow warbler, and white-tailed deer. Habitat Suitability Index (HSI) values were visually estimated and agreed upon by all HEP team members. The Carey Creek Project provides a total of 172.95 Habitat Units (HUs) for the species evaluated. Conifer forest habitat provides 4.91 HUs for bald eagle, black-capped chickadee, and white-tailed deer. Forested wetlands provide 52.68 HUs for bald eagle, black-capped chickadee, mallard, and white-tailed deer. Scrub-shrub wetlands provide 2.82 HUs for mallard, yellow warbler and white-tailed deer. Wet meadow and grassland meadow provide 98.13 HUs for mallard and Canada goose. Emergent wetlands provide 11.53 HUs for mallard, muskrat, and Canada goose. Open water provides 2.88 HUs for Canada goose, mallard, and muskrat. The objective of using HEP at the Carey Creek Project and other protected properties is to document the quality and quantity of available habitat for selected wildlife species. In this way, HEP provides information on the relative value of the same area at future points in time so that the effect of management activities on wildlife habitat can be quantified. When combined with other tools, the baseline HEP will be used to determine the most effective on-site management, restoration, and enhancement actions to increase habitat suitability for targeted species. The same process will be replicated every five years to quantitatively evaluate the effectiveness of management strategies in improving and maintaining habitat conditions while providing additional crediting to BPA for enhanced habitat values.

  6. Present habitat suitability for Anopheles atroparvus (Diptera, Culicidae and its coincidence with former malaria areas in mainland Portugal

    Directory of Open Access Journals (Sweden)

    César Capinha

    2009-05-01

    Full Text Available Malaria was a major health problem in the first half of the 20th Century in mainland Portugal. Nowadays, although the disease is no longer endemic, there is still the risk of future endemic infections due to the continuous occurrence of imported cases and the possibility of transmission in the country by Anopheles atroparvus Van Thiel, 1927. Since vector abundance constitute one of the foremost factors in malaria transmission, we have created several habitat suitability models to describe this vector species’ current distribution. Three different correlative models; namely (i a multilayer perceptron artificial neural network (MLP-ANN; (ii binary logistic regression (BLR; and (iii Mahalanobis distance were used to combine the species records with a set of five environmental predictors. Kappa coefficient values from k-fold cross-validation records showed that binary logistic regression produced the best predictions, while the other two models also produced acceptable results. Therefore, in order to reduce uncertainty, the three suitability models were combined. The resulting model identified high suitability for An. atroparvus in the majority of the country with exception of the northern and central coastal areas. Malaria distribution during the last endemic period in the country was also compared with the combined suitability model, and a high degree of spatial agreement was obtained (kappa = 0.62. It was concluded that habitat suitability for malaria vectors can constitute valuable information on the assessment of several spatial attributes of the disease. In addition, the results suggest that the spatial distribution of An. atroparvus in the country remains very similar to the one known about seven decades ago.

  7. Predicting Potential Changes in Suitable Habitat and Distribution by 2100 for Tree Species of the Eastern United States

    Science.gov (United States)

    Louis R Iverson; Anantha M. Prasad; Mark W. Schwartz; Mark W. Schwartz

    2005-01-01

    We predict current distribution and abundance for tree species present in eastern North America, and subsequently estimate potential suitable habitat for those species under a changed climate with 2 x CO2. We used a series of statistical models (i.e., Regression Tree Analysis (RTA), Multivariate Adaptive Regression Splines (MARS), Bagging Trees (...

  8. Fitness consequences of habitat variability, trophic position, and energy allocation across the depth distribution of a coral-reef fish

    Science.gov (United States)

    Goldstein, E. D.; D'Alessandro, E. K.; Sponaugle, S.

    2017-09-01

    Environmental clines such as latitude and depth that limit species' distributions may be associated with gradients in habitat suitability that can affect the fitness of an organism. With the global loss of shallow-water photosynthetic coral reefs, mesophotic coral ecosystems ( 30-150 m) may be buffered from some environmental stressors, thereby serving as refuges for a range of organisms including mobile obligate reef dwellers. Yet habitat suitability may be diminished at the depth boundary of photosynthetic coral reefs. We assessed the suitability of coral-reef habitats across the majority of the depth distribution of a common demersal reef fish ( Stegastes partitus) ranging from shallow shelf (SS, restrict foraging. Fish in MP environments had a broader diet niche, higher trophic position, and higher muscle C:N ratios compared to shallower environments. High C:N ratios suggest increased tissue lipid content in fish in MP habitats that coincided with higher investment in reproduction based on gonado-somatic index. These results suggest that peripheral MP reefs are suitable habitats for demersal reef fish and may be important refuges for organisms common on declining shallow coral reefs.

  9. Prospects for population expansion of the exotic aoudad (Ammotragus lervia; Bovidae) in the Iberian Peninsula: clues from habitat suitability modelling

    DEFF Research Database (Denmark)

    Cassinello, Jorge; Acevedo, Pelayo; Hortal, Joaquín

    2006-01-01

    We studied the geographical distribution and habitat suitability of an introduced ungulate, the aoudad (Ammotragus lervia), that is currently expanding its range in south-eastern Iberian Peninsula. We assessed the niche of the species using Ecological Niche Factor Analysis (ENFA) on (1......) environmental variables (climate and habitat type), and (2) potential aoudad landscape avoidance and human disturbance variables. We compared both niche descriptions to study the impact of human interference on niche selection of the species. ENFA models were calibrated using data on the population expanded...

  10. Understanding Existing Salmonid Habitat Availability and Connectivity to Improve River Management

    Science.gov (United States)

    Duffin, J.; Yager, E.; Tonina, D.; Benjankar, R. M.

    2017-12-01

    In the Pacific Northwest river restoration is common for salmon conservation. Mangers need methods to help target restoration to problem areas in rivers to create habitat that meets a species' needs. Hydraulic models and habitat suitability curves provide basic information on habitat availability and overall quality, but these analyses need to be expanded to address habitat quality based on the accessibility of habitats required for multiple life stages. Scientists are starting to use connectivity measurements to understand the longitudinal proximity of habitat patches, which can be used to address the habitat variability of a reach. By evaluating the availability and quality of habitat and calculating the connectivity between complementary habitats, such as spawning and rearing habitats, we aim to identify areas that should be targeted for restoration. To meet these goals, we assessed Chinook salmon habitat on the Lemhi River in Idaho. The depth and velocity outputs from a 2D hydraulic model are used in conjunction with locally created habitat suitability curves to evaluate the availability and quality of habitat for multiple Chinook salmon life stages. To assess the variability of the habitat, connectivity between habitat patches necessary for different life stages is calculated with a proximity index. A spatial representation of existing habitat quality and connectivity between complimentary habitats can be linked to river morphology by the evaluation of local geomorphic characteristics, including sinuosity and channel units. The understanding of the current habitat availability for multiple life stage needs, the connectivity between these habitat patches, and their relationship with channel morphology can help managers better identify restoration needs and direct their limited resources.

  11. Model output for deep-sea coral habitat suitability in the U.S. North and Mid-Atlantic from 2013 (NCEI Accession 0145923)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This dataset was created for potential use as an environmental predictor in spatial predictive models of deep-sea coral habitat suitability. Deep-sea corals are of...

  12. On Spatial Resolution in Habitat Models: Can Small-scale Forest Structure Explain Capercaillie Numbers?

    Directory of Open Access Journals (Sweden)

    Ilse Storch

    2002-06-01

    Full Text Available This paper explores the effects of spatial resolution on the performance and applicability of habitat models in wildlife management and conservation. A Habitat Suitability Index (HSI model for the Capercaillie (Tetrao urogallus in the Bavarian Alps, Germany, is presented. The model was exclusively built on non-spatial, small-scale variables of forest structure and without any consideration of landscape patterns. The main goal was to assess whether a HSI model developed from small-scale habitat preferences can explain differences in population abundance at larger scales. To validate the model, habitat variables and indirect sign of Capercaillie use (such as feathers or feces were mapped in six study areas based on a total of 2901 20 m radius (for habitat variables and 5 m radius sample plots (for Capercaillie sign. First, the model's representation of Capercaillie habitat preferences was assessed. Habitat selection, as expressed by Ivlev's electivity index, was closely related to HSI scores, increased from poor to excellent habitat suitability, and was consistent across all study areas. Then, habitat use was related to HSI scores at different spatial scales. Capercaillie use was best predicted from HSI scores at the small scale. Lowering the spatial resolution of the model stepwise to 36-ha, 100-ha, 400-ha, and 2000-ha areas and relating Capercaillie use to aggregated HSI scores resulted in a deterioration of fit at larger scales. Most importantly, there were pronounced differences in Capercaillie abundance at the scale of study areas, which could not be explained by the HSI model. The results illustrate that even if a habitat model correctly reflects a species' smaller scale habitat preferences, its potential to predict population abundance at larger scales may remain limited.

  13. Fish thermal habitat current use and simulation of thermal habitat availability in lakes of the Argentine Patagonian Andes under climate change scenarios RCP 4.5 and RCP 8.5.

    Science.gov (United States)

    Vigliano, Pablo H; Rechencq, Magalí M; Fernández, María V; Lippolt, Gustavo E; Macchi, Patricio J

    2018-09-15

    Habitat use in relation to the thermal habitat availability and food source as a forcing factor on habitat selection and use of Percichthys trucha (Creole perch), Oncorhynchus mykiss (rainbow trout), Salmo trutta (brown trout) and Salvelinus fontinalis (brook trout) were determined as well as future potential thermal habitat availability for these species under climate change scenarios Representative Concentration Pathways 4.5 and 8.5. This study was conducted in three interconnected lakes of Northern Patagonia (Moreno Lake system). Data on fish abundance was obtained through gill netting and hydroacoustics, and thermal profiles and fish thermal habitat suitability index curves were used to identify current species-specific thermal habitat use. Surface air temperatures from the (NEX GDDP) database for RCP scenarios 4.5 and 8.5 were used to model monthly average temperatures of the water column up to the year 2099 for all three lakes, and to determine potential future habitat availability. In addition, data on fish diet were used to determine whether food could act as a forcing factor in current habitat selection. The four species examined do not use all the thermally suitable habitats currently available to them in the three lakes, and higher fish densities are not necessarily constrained to their "fundamental thermal niches" sensu Magnuson et al. (1979), as extensive use is made of less suitable habitats. This is apparently brought about by food availability acting as a major forcing factor in habitat selection and use. Uncertainties related to the multidimensionality inherent to habitat selection and climate change imply that fish resource management in Patagonia will not be feasible through traditional incremental policies and strategic adjustments based on short-term predictions, but will have to become highly opportunistic and adaptive. Copyright © 2018 Elsevier B.V. All rights reserved.

  14. Habitat suitability criteria via parametric distributions: estimation, model selection and uncertainty

    Science.gov (United States)

    Som, Nicholas A.; Goodman, Damon H.; Perry, Russell W.; Hardy, Thomas B.

    2016-01-01

    Previous methods for constructing univariate habitat suitability criteria (HSC) curves have ranged from professional judgement to kernel-smoothed density functions or combinations thereof. We present a new method of generating HSC curves that applies probability density functions as the mathematical representation of the curves. Compared with previous approaches, benefits of our method include (1) estimation of probability density function parameters directly from raw data, (2) quantitative methods for selecting among several candidate probability density functions, and (3) concise methods for expressing estimation uncertainty in the HSC curves. We demonstrate our method with a thorough example using data collected on the depth of water used by juvenile Chinook salmon (Oncorhynchus tschawytscha) in the Klamath River of northern California and southern Oregon. All R code needed to implement our example is provided in the appendix. Published 2015. This article is a U.S. Government work and is in the public domain in the USA.

  15. QFD Based Benchmarking Logic Using TOPSIS and Suitability Index

    Directory of Open Access Journals (Sweden)

    Jaeho Cho

    2015-01-01

    Full Text Available Users’ satisfaction on quality is a key that leads successful completion of the project in relation to decision-making issues in building design solutions. This study proposed QFD (quality function deployment based benchmarking logic of market products for building envelope solutions. Benchmarking logic is composed of QFD-TOPSIS and QFD-SI. QFD-TOPSIS assessment model is able to evaluate users’ preferences on building envelope solutions that are distributed in the market and may allow quick achievement of knowledge. TOPSIS (Technique for Order of Preference by Similarity to Ideal Solution provides performance improvement criteria that help defining users’ target performance criteria. SI (Suitability Index allows analysis on suitability of the building envelope solution based on users’ required performance criteria. In Stage 1 of the case study, QFD-TOPSIS was used to benchmark the performance criteria of market envelope products. In Stage 2, a QFD-SI assessment was performed after setting user performance targets. The results of this study contribute to confirming the feasibility of QFD based benchmarking in the field of Building Envelope Performance Assessment (BEPA.

  16. Modeling of Iranian Cheetah Habitat using Ecological Niche Factor Analysis (Case Study: Dare Anjir Wildlife Refuge

    Directory of Open Access Journals (Sweden)

    N. Zamani

    2016-03-01

    Full Text Available Evaluation of habitat sustainability indexes is essential in wildlife management and conservation of rare species. Suitable habitats are required in wildlife managements and conservation also, they increase reproduction and survival rate of species. In this study in order to mapping habitat sustainability and recognizing habitat requirements of Iranian Cheetah (Acinonyx jubatus venaticus, field data from Dare Anjir  wildlife refuge were collected since autumn 2009 until summer 2011. Ecological Niche Factor Analysis approach has been used to develop habitat suitability model. In this method primary maps of  habitat variables including elevation, slope, aspect, vegetation cover, distance from water sources and environmental monitoring stations have been produced by Idrisi and Biomapper software and imported in Biomapper. The output scores obtained from the analysis showed that Iranian cheetah tends to mountain areas where has more topographical features for camouflage in order to hunting, and northern aspects which have more humidity, denser vegetation cover and more preys . Our result showed that the Iranian cheetah has medium niche width and prefer marginal habitats.

  17. Delineating priority habitat areas for the conservation of Andean bears in northern Ecuador

    Science.gov (United States)

    Peralvo, M.F.; Cuesta, F.; Van Manen, F.

    2005-01-01

    We sought to identify priority areas for the conservation of Andean bear (Tremarctos ornatus) habitat in the northern portion of the eastern Andean cordillera in Ecuador. The study area included pa??ramo and montane forest habitats within the Antisana and Cayambe-Coca ecological reserves, and unprotected areas north of these reserves with elevations ranging from 1,800 to 4,300 m. We collected data on bear occurrence along 53 transects during 2000-01 in the Oyacachi River basin, an area of indigenous communities within the Cayambe-Coca Ecological Reserve. We used those data and a set of 7 environmental variables to predict suitability of Andean bear habitat using Mahalanobis distance, a multivariate measure of dissimilarity. The Mahalanobis distance values were classified into 5 classes of habitat suitability and generalized to a resolution of 1,650-m ?? 1,650-m grid cells. Clusters of grid cells with high suitability values were delineated from the generalized model and denned as important habitat areas (IHAs) for conservation. The IHAs were ranked using a weighted index that included factors of elevation range, influence from disturbed areas, and current conservation status. We identified 12 IHAs, which were mainly associated with pa??ramo and cloud forest habitats; 2 of these areas have high conservation priorities because they are outside existing reserves and close to areas of human pressure. The distribution of the IHAs highlighted the role of human land use as the main source of fragmentation of Andean bear habitat in this region, emphasizing the importance of preserving habitat connectivity to allow the seasonal movements among habitat types that we documented for this species. Furthermore, the existence of areas with high habitat suitability close to areas of intense human use indicates the importance of bear-human conflict management as a critical Andean bear conservation strategy. We suggest that a promising conservation opportunity for this species is

  18. Discussion of quantitative assessment index system of suitability of the site for geological disposal repository of high-level radioactive waste

    International Nuclear Information System (INIS)

    Su Rui; Wang Ju

    2014-01-01

    Site selection and suitability assessment of site are one of important tasks of research and development of geological disposal engineering for high-level radioactive waste (HLW). Quantitative assessment of suitability of the site is based on the scientific, reasonable and operational index system. The discussion of index screening of quantitative assessment of suitability of the site is conducted. Principle of index screening is presented and index systems are established for different stages of site selection, including planning stage of site selection, region or area investigation stage, site characterization and site confirmation stage. But the considerations are taken of the complexity of site selection of geological disposal engineering for HLW and itself development of quantitative assessment method, so improvement of the index systems presented above is needed in the further. (authors)

  19. The influence of floodplain geomorphology and hydrologic connectivity on alligator gar (Atractosteus spatula) habitat along the embanked floodplain of the Lower Mississippi River

    Science.gov (United States)

    van der Most, Merel; Hudson, Paul F.

    2018-02-01

    The floodplain geomorphology of large lowland rivers is intricately related to aquatic ecosystems dependent upon flood pulse dynamics. The alligator gar (Atractosteus spatula) is native to the Lower Mississippi River and dependent upon floodplain backwater areas for spawning. In this study we utilize a geospatial approach to develop a habitat suitability index for alligator gar that explicitly considers hydrologic connectivity and the floodplain geomorphology along a frequently inundated segment of the Lower Mississippi River. The data sets include Landsat imagery, a high-resolution LiDAR digital elevation model (DEM), National Hydrography Dataset (NHD), and hydrologic and geomorphic data. A habitat suitability index is created based on the extent and frequency of inundation, water depth, temperature, and vegetation. A comparison between the remote sensing approach and the NHD revealed substantial differences in the area and location of water bodies available for alligator gar spawning. The final habitat suitability index indicates that a modest proportion (19%) of the overall embanked floodplain is available for alligator gar spawning. Opportunities exist for management efforts to utilize engineered and natural geomorphic features to facilitate hydrologic connectivity at flow levels below flood stage that would expand the habitat of alligator gar across the floodplain. The study results have direct implications regarding environmental restoration of the Lower Mississippi, an iconic example of an embanked meandering river floodplain.

  20. Using environmental niche modeling to find suitable habitats for the Hard-ground Barasingha in Madhya Pradesh, India

    Directory of Open Access Journals (Sweden)

    C. P. Singh

    2015-09-01

    Full Text Available The subspecies of Swamp Deer, the Hard-ground Barasingha (Rucervus duvaucelii branderi Pocock, is presently found only in Kanha Tiger Reserve (KTR in Madhya Pradesh, India. This subspecies is highly vulnerable to extinction, and reintroduction in suitable sites is the need of the hour.  Environmental niche models (GARP, SVM, ED, CSM aimed at providing a detailed prediction of species distribution by relating presence of species to 19 bioclimatic indices were developed, using swamp deer occurrence records in KTR. The predictions were appropriately weighted with the prevailing LU/LC classes to identify suitable habitats in Madhya Pradesh, India. The result shows that the southern region of Madhya Pradesh is suitable for the sustenance of Barasingha with varying degrees of habitability. Vicarious validation shows that most of these forest areas were the same as that of historical records dating back to 50 years. However, land use maps can help identify areas where this subspecies can be reintroduced. 

  1. Habitat Evaluation Procedures (HEP) Report; Tacoma Creek South Project, Technical Report 2003-2005.

    Energy Technology Data Exchange (ETDEWEB)

    Entz, Ray

    2005-02-01

    On July 6, 2004, the Habitat Evaluation Procedure (HEP) was used to determine baseline habitat suitability on the Tacoma Creek South property, an acquisition completed by the Kalispel Tribe of Indians in June 2004. Evaluation species and appropriate models include bald eagle, black-capped chickadee, Canada goose, mallard, muskrat, yellow warbler, and white-tailed deer. Habitat Suitability Index (HSI) values were visually estimated and agreed upon by all HEP team members. The Tacoma Creek South Project provides a total of 190.79 Habitat Units (HUs) for the species evaluated. Emergent wetlands provide 20.51 HUs for Canada goose, mallard, and muskrat. Grassland provides 1.65 HUs for Canada goose and mallard. Scrub-shrub vegetation provides 11.76 HUs for mallard, yellow warbler, and white-tailed deer. Conifer forest habitat provides 139.92 HUs for bald eagle, black-capped chickadee, and white-tailed deer. Deciduous forest also provides 19.15 HUs for bald eagle, black-capped chickadee, mallard, and white-tailed deer. The objective of using HEP at the Tacoma Creek South Project and other protected properties is to document the quality and quantity of available habitat for selected wildlife species. In this way, HEP provides information on the relative value of the same area at future points in time so that the effect of management activities on wildlife habitat can be quantified. When combined with other tools, the baseline HEP will be used to determine the most effective on-site management, restoration, and enhancement actions to increase habitat suitability for targeted species. The same process will be replicated every five years to quantitatively evaluate the effectiveness of management strategies in improving and maintaining habitat conditions while providing additional crediting to BPA for enhanced habitat values.

  2. The global distribution of deep-water Antipatharia habitat

    Science.gov (United States)

    Yesson, Chris; Bedford, Faye; Rogers, Alex D.; Taylor, Michelle L.

    2017-11-01

    Antipatharia are a diverse group of corals with many species found in deep water. Many Antipatharia are habitat for associates, have extreme longevity and some species can occur beyond 8500 m depth. As they are major constituents of'coral gardens', which are Vulnerable Marine Ecosystems (VMEs), knowledge of their distribution and environmental requirements is an important pre-requisite for informed conservation planning particularly where the expense and difficulty of deep-sea sampling prohibits comprehensive surveys. This study uses a global database of Antipatharia distribution data to perform habitat suitability modelling using the Maxent methodology to estimate the global extent of black coral habitat suitability. The model of habitat suitability is driven by temperature but there is notable influence from other variables of topography, surface productivity and oxygen levels. This model can be used to predict areas of suitable habitat, which can be useful for conservation planning. The global distribution of Antipatharia habitat suitability shows a marked contrast with the distribution of specimen observations, indicating that many potentially suitable areas have not been sampled, and that sampling effort has been disproportionate to shallow, accessible areas inside marine protected areas (MPAs). Although 25% of Antipatharia observations are located in MPAs, only 7-8% of predicted suitable habitat is protected, which is short of the Convention on Biological Diversity target to protect 10% of ocean habitats by 2020.

  3. Habitat Heterogeneity Variably Influences Habitat Selection by Wild Herbivores in a Semi-Arid Tropical Savanna Ecosystem.

    Directory of Open Access Journals (Sweden)

    Victor K Muposhi

    Full Text Available An understanding of the habitat selection patterns by wild herbivores is critical for adaptive management, particularly towards ecosystem management and wildlife conservation in semi arid savanna ecosystems. We tested the following predictions: (i surface water availability, habitat quality and human presence have a strong influence on the spatial distribution of wild herbivores in the dry season, (ii habitat suitability for large herbivores would be higher compared to medium-sized herbivores in the dry season, and (iii spatial extent of suitable habitats for wild herbivores will be different between years, i.e., 2006 and 2010, in Matetsi Safari Area, Zimbabwe. MaxEnt modeling was done to determine the habitat suitability of large herbivores and medium-sized herbivores. MaxEnt modeling of habitat suitability for large herbivores using the environmental variables was successful for the selected species in 2006 and 2010, except for elephant (Loxodonta africana for the year 2010. Overall, large herbivores probability of occurrence was mostly influenced by distance from rivers. Distance from roads influenced much of the variability in the probability of occurrence of medium-sized herbivores. The overall predicted area for large and medium-sized herbivores was not different. Large herbivores may not necessarily utilize larger habitat patches over medium-sized herbivores due to the habitat homogenizing effect of water provisioning. Effect of surface water availability, proximity to riverine ecosystems and roads on habitat suitability of large and medium-sized herbivores in the dry season was highly variable thus could change from one year to another. We recommend adaptive management initiatives aimed at ensuring dynamic water supply in protected areas through temporal closure and or opening of water points to promote heterogeneity of wildlife habitats.

  4. Climate change sensitivity index for Pacific salmon habitat in southeast Alaska.

    Directory of Open Access Journals (Sweden)

    Colin S Shanley

    Full Text Available Global climate change may become one of the most pressing challenges to Pacific Salmon conservation and management for southeast Alaska in the 21st Century. Predicted hydrologic change associated with climate change will likely challenge the ability of specific stocks to adapt to new flow regimes and resulting shifts in spawning and rearing habitats. Current research suggests egg-to-fry survival may be one of the most important freshwater limiting factors in Pacific Salmon's northern range due to more frequent flooding events predicted to scour eggs from mobile spawning substrates. A watershed-scale hydroclimatic sensitivity index was developed to map this hypothesis with an historical stream gauge station dataset and monthly multiple regression-based discharge models. The relative change from present to future watershed conditions predicted for the spawning and incubation period (September to March was quantified using an ensemble global climate model average (ECHAM5, HadCM3, and CGCM3.1 and three global greenhouse gas emission scenarios (B1, A1B, and A2 projected to the year 2080. The models showed the region's diverse physiography and climatology resulted in a relatively predictable pattern of change: northern mainland and steeper, snow-fed mountainous watersheds exhibited the greatest increases in discharge, an earlier spring melt, and a transition into rain-fed hydrologic patterns. Predicted streamflow increases for all watersheds ranged from approximately 1-fold to 3-fold for the spawning and incubation period, with increased peak flows in the spring and fall. The hydroclimatic sensitivity index was then combined with an index of currently mapped salmon habitat and species diversity to develop a research and conservation priority matrix, highlighting potentially vulnerable to resilient high-value watersheds. The resulting matrix and observed trends are put forth as a framework to prioritize long-term monitoring plans, mitigation

  5. Vulnerability Assessment of Mangrove Habitat to the Variables of the Oceanography Using CVI Method (Coastal Vulnerability Index) in Trimulyo Mangrove Area, Genuk District, Semarang

    Science.gov (United States)

    Ahmad, Rifandi Raditya; Fuad, Muhammad

    2018-02-01

    Some functions of mangrove areas in coastal ecosystems as a green belt, because mangrove serves as a protector of the beach from the sea waves, as a good habitat for coastal biota and for nutrition supply. Decreased condition or degradation of mangrove habitat caused by several oceanographic factors. Mangrove habitats have some specific characteristics such as salinity, tides, and muddy substrates. Considering the role of mangrove area is very important, it is necessary to study about the potential of mangrove habitat so that the habitat level of mangrove habitat in the east coast of Semarang city is known. The purpose of this research is to obtain an index and condition of habitat of mangrove habitat at location of research based on tidal, salinity, substrate type, coastline change. Observation by using purposive method and calculation of habitat index value of mangrove habitat using CVI (Coastal Vulnerability Index) method with scores divided into 3 groups namely low, medium and high. The results showed that there is a zone of research belonging to the medium vulnerability category with the most influential variables is because there is abrasion that sweeps the mangrove substrate. Trimulyo mangrove habitat has high vulnerable variable of tidal frequency, then based on value variable Salinity is categorized as low vulnerability, whereas for mangrove habitat vulnerability based on variable type of substrate belong to low and medium vulnerability category. The CVI values of mangrove habitats divided into zones 1; 2; and 3 were found to varying values of 1.54; 3.79; 1.09, it indicates that there is a zone with the vulnerability of mangrove habitat at the study site belonging to low and medium vulnerability category.

  6. An ionospheric index suitable for estimating the degree of ionospheric perturbations

    Science.gov (United States)

    Wilken, Volker; Kriegel, Martin; Jakowski, Norbert; Berdermann, Jens

    2018-03-01

    Space weather can strongly affect trans-ionospheric radio signals depending on the used frequency. In order to assess the strength of a space weather event from its origin at the sun towards its impact on the ionosphere a number of physical quantities need to be derived from scientific measurements. These are for example the Wolf number sunspot index, the solar flux density F10.7, measurements of the interplanetary magnetic field, the proton density, the solar wind speed, the dynamical pressure, the geomagnetic indices Auroral Electrojet, Kp, Ap and Dst as well as the Total Electron Content (TEC), the Rate of TEC, the scintillation indices S4 and σ(ϕ) and the Along-Arc TEC Rate index index. All these quantities provide in combination with an additional classification an orientation in a physical complex environment. Hence, they are used for brief communication of a simplified but appropriate space situation awareness. However, space weather driven ionospheric phenomena can affect many customers in the communication and navigation domain, which are still served inadequately by the existing indices. We present a new robust index, that is able to properly characterize temporal and spatial ionospheric variations of small to medium scales. The proposed ionospheric disturbance index can overcome several drawbacks of other ionospheric measures and might be suitable as potential driver for an ionospheric space weather scale.

  7. Water stress index for alkaline fen habitat based on UAV and continuous tower measurements of canopy infrared temperature

    Science.gov (United States)

    Ciężkowski, Wojciech; Jóźwiak, Jacek; Chormański, Jarosław; Szporak-Wasilewska, Sylwia; Kleniewska, Małgorzata

    2017-04-01

    This study is focused on developing water stress index for alkaline fen, to evaluate water stress impact on habitat protected within Natura 2000 network: alkaline fens (habitat code:7230). It is calculated based on continuous measurements of air temperature, relative humidity and canopy temperature from meteorological tower and several UAV flights for canopy temperature registration. Measurements were taken during the growing season in 2016 in the Upper Biebrza Basin in north-east Poland. Firstly methodology of the crop water stress index (CWSI) determination was used to obtained non-water stress base line based on continuous measurements (NWSBtower). Parameters of NWSBtower were directly used to calculate spatial variability of CWSI for UAV thermal infrared (TIR) images. Then for each UAV flight day at least 3 acquisition were performed to define NWSBUAV. NWSBUAV was used to calculate canopy waters stress for whole image relative to the less stressed areas. The spatial distribution of developed index was verified using remotely sensed indices of vegetation health. Results showed that in analysed area covered by sedge-moss vegetation NWSB cannot be used directly. The proposed modification of CWSI allows identifying water stress in alkaline fen habitats and was called as Sedge-Moss Water Stress Index (SMWSI). The study shows possibility of usage remotely sensed canopy temperature data to detect areas exposed to the water stress on wetlands. This research has been carried out under the Biostrateg Programme of the Polish National Centre for Research and Development (NCBiR), project No.: DZP/BIOSTRATEG-II/390/2015: The innovative approach supporting monitoring of non-forest Natura 2000 habitats, using remote sensing methods (HabitARS).

  8. Integrating Open Access Geospatial Data to Map the Habitat Suitability of the Declining Corn Bunting (Miliaria calandra

    Directory of Open Access Journals (Sweden)

    Abdulhakim M. Abdi

    2013-09-01

    Full Text Available The efficacy of integrating open access geospatial data to produce habitat suitability maps for the corn bunting (Miliaria calandra was investigated. Landsat Enhanced Thematic Mapper Plus (ETM+, Shuttle Radar Topography Mission (SRTM and Corine (Coordination of Information on the Environment land cover data for the year 2000 (CLC2000 were processed to extract explanatory variables and divided into three sets; Satellite (ETM+, SRTM, CLC2000 and Combined (CLC2000 + Satellite. Presence-absence data for M. calandra, collected during structured surveys for the Catalan Breeding Bird Atlas, were provided by the Catalan Ornithological Institute. The dataset was partitioned into an equal number of presence and absence points by dividing it into five groups, each composed of 88 randomly selected presence points to match the number of absences. A logistic regression model was then built for each group. Models were evaluated using area under the curve (AUC of the receiver operating characteristic (ROC. Results of the five groups were averaged to produce mean Satellite, CLC2000 and Combined models. The mean AUC values were 0.69, 0.81 and 0.90 for the CLC2000, Satellite and the Combined model, respectively. The probability of M. calandra presence had the strongest positive correlation with land surface temperature, modified soil adjusted vegetation index, coefficient of variation for ETM+ band 5 and the fraction of non-irrigated arable land.

  9. Habitat characteristic of macrozoobenthos in Naborsahan River of Toba Lake, North Sumatra, Indonesia

    Science.gov (United States)

    Basyuni, M.; Lubis, M. S.; Suryanti, A.

    2018-02-01

    This research described the relative abundance, dominance index, and index of macrozoobenthos equitability in Naborsahan River of Toba Lake, North Sumatra, Indonesia. The purposive random sampling at three stations was used to characterize the biological, chemical, and physical parameters of macrozoobenthos. The highest relative abundance of macrozoobenthos found at station 2 (99.96%). By contrast, the highest dominance index was at station 3 (0.31), and the maximum equitability index found at station 1 (0.94). The present results showed diversity parameters among the stations. A principal component analysis (PCA) was used to determine the habitat characteristics of macrozoobenthos. PCA analysis depicted that six parameters studied, brightness, turbidity, depth, temperature, dissolved oxygen (DO) and biochemical oxygen demand (BOD5) play a significant role on the relative abundance, dominance index, and equitability index. PCA analysis suggested that station 3 was suitable habitat characteristic for the life of macro-zoobenthos indicating of the negative axis. The present study demonstrated the six parameters should be conserved to support the survival of macrozoobenthos.

  10. Enviromentally sensitive patch index of desertification risk applied to the main habitats of Sicily

    Science.gov (United States)

    Duro, A.; Piccione, V.; Ragusa, M. A.; Rapicavoli, V.; Veneziano, V.

    2017-07-01

    The authors applied the MEDALUS - Mediterranean Desertification and Land Use - procedure to the most representative sicilian habitat by extension, socio-economic and environmental importance, in order to assess the risk of desertification. Thanks to the ESPI, Environmentally Sensitive Patch Index, in this paper the authors estimate the current and future regional levels of desertification risk.

  11. ANALYZE THE IMPACT OF HABITAT PATCHES ON WILDLIFE ROAD-KILL

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    S. Seok

    2015-10-01

    Full Text Available The ecosystem fragmentation due to transportation infrastructure causes a road-kill phenomenon. When making policies for mitigating road-kill it is important to select target-species in order to enhance its efficiency. However, many wildlife crossing structures have been questioned regarding their effectiveness due to lack of considerations such as target-species selection, site selection, management, etc. The purpose of this study is to analyse the impact of habitat patches on wildlife road-kill and to suggest that spatial location of habitat patches should be considered as one of the important factors when making policies for mitigating road-kill. Habitat patches were presumed from habitat variables and a suitability index on target-species that was chosen by literature review. The road-kill hotspot was calculated using Getis-Ord Gi*. After that, we performed a correlation analysis between Gi Z-score and the distance from habitat patches to the roads. As a result, there is a low negative correlation between two variables and it increases the Gi Z-score if the habitat patches and the roads become closer.

  12. Analyze the Impact of Habitat Patches on Wildlife Road-Kill

    Science.gov (United States)

    Seok, S.; Lee, J.

    2015-10-01

    The ecosystem fragmentation due to transportation infrastructure causes a road-kill phenomenon. When making policies for mitigating road-kill it is important to select target-species in order to enhance its efficiency. However, many wildlife crossing structures have been questioned regarding their effectiveness due to lack of considerations such as target-species selection, site selection, management, etc. The purpose of this study is to analyse the impact of habitat patches on wildlife road-kill and to suggest that spatial location of habitat patches should be considered as one of the important factors when making policies for mitigating road-kill. Habitat patches were presumed from habitat variables and a suitability index on target-species that was chosen by literature review. The road-kill hotspot was calculated using Getis-Ord Gi*. After that, we performed a correlation analysis between Gi Z-score and the distance from habitat patches to the roads. As a result, there is a low negative correlation between two variables and it increases the Gi Z-score if the habitat patches and the roads become closer.

  13. Habitat features and predictive habitat modeling for the Colorado chipmunk in southern New Mexico

    Science.gov (United States)

    Rivieccio, M.; Thompson, B.C.; Gould, W.R.; Boykin, K.G.

    2003-01-01

    Two subspecies of Colorado chipmunk (state threatened and federal species of concern) occur in southern New Mexico: Tamias quadrivittatus australis in the Organ Mountains and T. q. oscuraensis in the Oscura Mountains. We developed a GIS model of potentially suitable habitat based on vegetation and elevation features, evaluated site classifications of the GIS model, and determined vegetation and terrain features associated with chipmunk occurrence. We compared GIS model classifications with actual vegetation and elevation features measured at 37 sites. At 60 sites we measured 18 habitat variables regarding slope, aspect, tree species, shrub species, and ground cover. We used logistic regression to analyze habitat variables associated with chipmunk presence/absence. All (100%) 37 sample sites (28 predicted suitable, 9 predicted unsuitable) were classified correctly by the GIS model regarding elevation and vegetation. For 28 sites predicted suitable by the GIS model, 18 sites (64%) appeared visually suitable based on habitat variables selected from logistic regression analyses, of which 10 sites (36%) were specifically predicted as suitable habitat via logistic regression. We detected chipmunks at 70% of sites deemed suitable via the logistic regression models. Shrub cover, tree density, plant proximity, presence of logs, and presence of rock outcrop were retained in the logistic model for the Oscura Mountains; litter, shrub cover, and grass cover were retained in the logistic model for the Organ Mountains. Evaluation of predictive models illustrates the need for multi-stage analyses to best judge performance. Microhabitat analyses indicate prospective needs for different management strategies between the subspecies. Sensitivities of each population of the Colorado chipmunk to natural and prescribed fire suggest that partial burnings of areas inhabited by Colorado chipmunks in southern New Mexico may be beneficial. These partial burnings may later help avoid a fire

  14. Habitat evaluation of wild Amur tiger (Panthera tigris altaica) and conservation priority setting in north-eastern China.

    Science.gov (United States)

    Xiaofeng, Luan; Yi, Qu; Diqiang, Li; Shirong, Liu; Xiulei, Wang; Bo, Wu; Chunquan, Zhu

    2011-01-01

    The Amur Tiger (Panthera tigris altaica) is one of the world's most endangered species. Recently, habitat fragmentation, food scarcity and human hunting have drastically reduced the population size and distribution areas of Amur tigers in the wild, leaving them on the verge of extinction. Presently, they are only found in the north-eastern part of China. In this study, we developed a reference framework using methods and technologies of analytic hierarchy process (AHP), remote sensing (RS), geographic information system (GIS), GAP analysis and Natural Break (Jenks) classification to evaluate the habitat and to set the conservation priorities for Amur tigers in eastern areas of Heilongjiang and Jilin Provinces of northeast China. We proposed a Habitat Suitability Index (HSI) incorporating 7 factors covering natural conditions and human disturbance. Based on the HSI values, the suitability was classified into five levels from the most to not suitable. Finally, according to results of GAP analysis, we identified six conservation priorities and designed a conservation landscape incorporating four new nature reserves, enlarging two existing ones, and creating four linkages for Amur tigers in northeast China. The case study showed that the core habitats (the most suitable and highly suitable habitats) identified for Amur tigers covered 35,547 km(2), accounting for approximately 26.71% of the total study area (1,33,093 km(2)). However, existing nature reserves protected only (7124 km(2) or) 20.04% of the identified core habitats. Thus, enlargement of current reserves is necessary and urgent for the tiger's conservation and restoration. Moreover, the establishment of wildlife corridors linking core habitats will provide an efficient reserve network for tiger conservation to maintain the evolutionary potential of Amur tigers facing environmental changes. Copyright © 2010 Elsevier Ltd. All rights reserved.

  15. Modeling Habitat Suitability of Migratory Birds from Remote Sensing Images Using Convolutional Neural Networks

    Science.gov (United States)

    Su, Jin-He; Piao, Ying-Chao; Luo, Ze; Yan, Bao-Ping

    2018-01-01

    Simple Summary The understanding of the spatio-temporal distribution of the species habitats would facilitate wildlife resource management and conservation efforts. Existing methods have poor performance due to the limited availability of training samples. More recently, location-aware sensors have been widely used to track animal movements. The aim of the study was to generate suitability maps of bar-head geese using movement data coupled with environmental parameters, such as remote sensing images and temperature data. Therefore, we modified a deep convolutional neural network for the multi-scale inputs. The results indicate that the proposed method can identify the areas with the dense goose species around Qinghai Lake. In addition, this approach might also be interesting for implementation in other species with different niche factors or in areas where biological survey data are scarce. Abstract With the application of various data acquisition devices, a large number of animal movement data can be used to label presence data in remote sensing images and predict species distribution. In this paper, a two-stage classification approach for combining movement data and moderate-resolution remote sensing images was proposed. First, we introduced a new density-based clustering method to identify stopovers from migratory birds’ movement data and generated classification samples based on the clustering result. We split the remote sensing images into 16 × 16 patches and labeled them as positive samples if they have overlap with stopovers. Second, a multi-convolution neural network model is proposed for extracting the features from temperature data and remote sensing images, respectively. Then a Support Vector Machines (SVM) model was used to combine the features together and predict classification results eventually. The experimental analysis was carried out on public Landsat 5 TM images and a GPS dataset was collected on 29 birds over three years. The results

  16. Testing Cort-Fitness and Cort-Adaptation hypotheses in a habitat suitability gradient for roe deer

    Science.gov (United States)

    Escribano-Avila, Gema; Pettorelli, Nathalie; Virgós, Emilio; Lara-Romero, Carlos; Lozano, Jorge; Barja, Isabel; Cuadra, Felipe S.; Puerta, Marisa

    2013-11-01

    According to the Cort-Fitness Hypothesis, higher stress levels (glucocorticoids) in vertebrates are correlated to lower fitness. However, recent studies have failed to validate this hypothesis. A proposed wider framework suggests that reproduction can be perceived as an overload adds up to other environmental challenges that individuals must adjust to. In this case, elevated glucocorticoids could help individuals to allocate resources to reproduction without comprising other functions, leading to the expectation of a positive cort-fitness relationship. This has been proposed as the Cort-Adaptation Hypothesis. Stress levels result from a complex interaction between the environment and the neuroendocrine system of animals. Accounting for physiological functions involved in how animals cope with their environment would help to clarify the relationship between glucocorticoids and animal performance. We used roe deer (Capreolus capreolus) inhabiting diverse habitats in the Iberian Peninsula to: i) test the Cort-Fitness and Cort-Adaptation hypotheses by indexing fitness using a comprehensive physiological approach which takes into account fundamental physiological functions and their trade-offs; and ii) evaluate the link between primary productivity and individuals' condition in a seasonal environment. We evaluated spatial and temporal variation in stress levels, reproductive hormone levels, nutritional status and immune function from fecal samples collected in 2010. Lower stress levels were related to better condition in non-reproductive seasons but not to higher primary productivity. In contrast, stress levels were always positively related to reproductive condition, which was better in most productive habitats. Summer and winter were the less productive seasons and the more challenging for the species in the habitat gradient studied. In winter, reproductive condition traded off against immune function being biased toward immune function in less productive habitats. In

  17. Wetland habitat disturbance best predicts metrics of an amphibian index of biotic integrity

    Science.gov (United States)

    Stapanian, Martin A.; Micacchion, Mick; Adams, Jean V.

    2015-01-01

    Regression and classification trees were used to identify the best predictors of the five component metrics of the Ohio Amphibian Index of Biotic Integrity (AmphIBI) in 54 wetlands in Ohio, USA. Of the 17 wetland- and surrounding landscape-scale variables considered, the best predictor for all AmphIBI metrics was habitat alteration and development within the wetland. The results were qualitatively similar to the best predictors for a wetland vegetation index of biotic integrity, suggesting that similar management practices (e.g., reducing or eliminating nutrient enrichment from agriculture, mowing, grazing, logging, and removing down woody debris) within the boundaries of the wetland can be applied to effectively increase the quality of wetland vegetation and amphibian communities.

  18. GIS habitat analysis for lesser prairie-chickens in southeastern New Mexico

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    Neville Paul

    2006-12-01

    Full Text Available Abstract Background We conducted Geographic Information System (GIS habitat analyses for lesser prairie-chicken (LPCH, Tympanuchus pallidicinctus conservation planning. The 876,799 ha study area included most of the occupied habitat for the LPCH in New Mexico. The objectives were to identify and quantify: 1. suitable LPCH habitat in New Mexico, 2. conversion of native habitats, 3. potential for habitat restoration, and 4. unsuitable habitat available for oil and gas activities. Results We found 16% of suitable habitat (6% of the study area distributed in 13 patches of at least 3,200 ha and 11% of suitable habitat (4% of the study area distributed in four patches over 7,238 ha. The area converted from native vegetation types comprised 17% of the study area. Ninety-five percent of agricultural conversion occurred on private lands in the northeastern corner of the study area. Most known herbicide-related conversions (82% occurred in rangelands in the western part of the study area, on lands managed primarily by the US Bureau of Land Management (BLM. We identified 88,190 ha (10% of the study area of habitats with reasonable restoration potential. Sixty-two percent of the primary population area (PPA contained occupied, suitable, or potentially suitable habitat, leaving 38% that could be considered for oil and gas development. Conclusion Although suitable LPCH habitat appears at first glance to be abundant in southeastern New Mexico, only a fraction of apparently suitable vegetation types constitute quality habitat. However, we identified habitat patches that could be restored through mesquite control or shin-oak reintroduction. The analysis also identified areas of unsuitable habitat with low restoration potential that could be targeted for oil and gas exploration, in lieu of occupied, high-quality habitats. Used in combination with GIS analysis and current LPCH population data, the habitat map represents a powerful conservation and management tool.

  19. GIS habitat analysis for lesser prairie-chickens in southeastern New Mexico.

    Science.gov (United States)

    Johnson, Kristine; Neville, Teri B; Neville, Paul

    2006-12-04

    We conducted Geographic Information System (GIS) habitat analyses for lesser prairie-chicken (LPCH, Tympanuchus pallidicinctus) conservation planning. The 876,799 ha study area included most of the occupied habitat for the LPCH in New Mexico. The objectives were to identify and quantify: 1. suitable LPCH habitat in New Mexico, 2. conversion of native habitats, 3. potential for habitat restoration, and 4. unsuitable habitat available for oil and gas activities. We found 16% of suitable habitat (6% of the study area) distributed in 13 patches of at least 3,200 ha and 11% of suitable habitat (4% of the study area) distributed in four patches over 7,238 ha. The area converted from native vegetation types comprised 17% of the study area. Ninety-five percent of agricultural conversion occurred on private lands in the northeastern corner of the study area. Most known herbicide-related conversions (82%) occurred in rangelands in the western part of the study area, on lands managed primarily by the US Bureau of Land Management (BLM). We identified 88,190 ha (10% of the study area) of habitats with reasonable restoration potential. Sixty-two percent of the primary population area (PPA) contained occupied, suitable, or potentially suitable habitat, leaving 38% that could be considered for oil and gas development. Although suitable LPCH habitat appears at first glance to be abundant in southeastern New Mexico, only a fraction of apparently suitable vegetation types constitute quality habitat. However, we identified habitat patches that could be restored through mesquite control or shin-oak reintroduction. The analysis also identified areas of unsuitable habitat with low restoration potential that could be targeted for oil and gas exploration, in lieu of occupied, high-quality habitats. Used in combination with GIS analysis and current LPCH population data, the habitat map represents a powerful conservation and management tool.

  20. BIOLOGI POPULASI RAJUNGAN (PORTUNUS PELAGICUS DAN KARAKTERISTIK LINGKUNGAN HABITAT ESENSIALNYA SEBAGAI UPAYA AWAL PERLINDUNGAN DI LAMPUNG TIMUR

    Directory of Open Access Journals (Sweden)

    Rahmat Kurnia

    2014-04-01

    Full Text Available There are several option management measures in preventing sustainability stock of the blue swimming crab (Portunus pelagicus, i.e., nursery ground conservation. Thus, the objective of this study was to analyses habitat characteristic and its population biology in the PGN marine embayment of Labuhan Maringgai, as one among crab habitat essential in East Lampung coastal water. The potential nursery ground conservation was assessed by habitat suitability index, carrying capacity, distribution and abundance as well as crabs size. The result shows that environmental condition was still suitable, even though the habitat carrying capacity tend to degraded by an increasing of turbidity and sedimentation at the embayment mouth. The crabs captured were also not representing of peak abundance season and recruitment during sampling period, while those crab size almost 100% under Lm50. The strategic management directive is required to control in utilization of crab’s essential habitat, including crab fishing by any fishing gear resulted undersize captured crabs. Meanwhile, to propose habitat essential conservation might need more consideration and comprehensive study, including social economic and cultural aspects and co-management approach may be required in management measure applied.

  1. Habitat suitability mapping of Anopheles darlingi in the surroundings of the Manso hydropower plant reservoir, Mato Grosso, Central Brazil

    Directory of Open Access Journals (Sweden)

    Miyazaki Rosina D

    2007-03-01

    Full Text Available Abstract Background Hydropower plants provide more than 78 % of Brazil's electricity generation, but the country's reservoirs are potential new habitats for main vectors of malaria. In a case study in the surroundings of the Manso hydropower plant in Mato Grosso state, Central Brazil, habitat suitability of Anopheles darlingi was studied. Habitat profile was characterized by collecting environmental data. Remote sensing and GIS techniques were applied to extract additional spatial layers of land use, distance maps, and relief characteristics for spatial model building. Results Logistic regression analysis and ROC curves indicate significant relationships between the environment and presence of An. darlingi. Probabilities of presence strongly vary as a function of land cover and distance from the lake shoreline. Vector presence was associated with spatial proximity to reservoir and semi-deciduous forests followed by Cerrado woodland. Vector absence was associated with open vegetation formations such as grasslands and agricultural areas. We suppose that non-significant differences of vector incidences between rainy and dry seasons are associated with the availability of anthropogenic breeding habitat of the reservoir throughout the year. Conclusion Satellite image classification and multitemporal shoreline simulations through DEM-based GIS-analyses consist in a valuable tool for spatial modeling of A. darlingi habitats in the studied hydropower reservoir area. Vector presence is significantly increased in forested areas near reservoirs in bays protected from wind and wave action. Construction of new reservoirs under the tropical, sub-humid climatic conditions should therefore be accompanied by entomologic studies to predict the risk of malaria epidemics.

  2. Using urban forest assessment tools to model bird habitat potential

    Science.gov (United States)

    Lerman, Susannah B.; Nislow, Keith H.; Nowak, David J.; DeStefano, Stephen; King, David I.; Jones-Farrand, D. Todd

    2014-01-01

    The alteration of forest cover and the replacement of native vegetation with buildings, roads, exotic vegetation, and other urban features pose one of the greatest threats to global biodiversity. As more land becomes slated for urban development, identifying effective urban forest wildlife management tools becomes paramount to ensure the urban forest provides habitat to sustain bird and other wildlife populations. The primary goal of this study was to integrate wildlife suitability indices to an existing national urban forest assessment tool, i-Tree. We quantified available habitat characteristics of urban forests for ten northeastern U.S. cities, and summarized bird habitat relationships from the literature in terms of variables that were represented in the i-Tree datasets. With these data, we generated habitat suitability equations for nine bird species representing a range of life history traits and conservation status that predicts the habitat suitability based on i-Tree data. We applied these equations to the urban forest datasets to calculate the overall habitat suitability for each city and the habitat suitability for different types of land-use (e.g., residential, commercial, parkland) for each bird species. The proposed habitat models will help guide wildlife managers, urban planners, and landscape designers who require specific information such as desirable habitat conditions within an urban management project to help improve the suitability of urban forests for birds.

  3. HABITAT PREFERENSIAL TARSIUS BELITUNG (Cephalopachus bancanus saltator Elliot, 1910

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    Fifin Fitriana

    2017-04-01

    Full Text Available Belitung tarsier (Cephalopachus bancanus saltator is an endemic species in Belitung Island from Cephalopachus genus. Existence of belitung tarsier in its habitat is now under threatened by deforestatition. Due to lack information about its habitat and as conservation effort, this research was tackled to reveal the characteristic of habitat preference of belitung tarsier. The aim of this study are to identify characteristic of habitat preference of belitung tarsier. This research was conducted in March until May 2016 at around Mount Tajam Protected Forest and plantation area. Presence of tarsiers were identified by direct observation, urine odor detection, identifying based tarsier habitat suitability and the local information. Chi-square and Neu methode was used to analyze the variable of habitat preference of belitung tarsiers. This research found that characteristics of habitat preference of belitung tarsier consisted of its homerange was prefer to dry land agricultural and shurb land cover type, not too tight canopy cover (Leaf Area Index /LAI value of 0,83-2,46, close to the edge of forest (0 -874 m, roads (0 – 3.698 m and settlements (0-403 m, elevation range was between 1 -142 m asl, slope slightly (0-15%, temperature 24-25 0C and high rainfall (3.222 – 3.229 mm/year. Characteristic of habitat preference information could be considered to develop conservation action of belitung tarsier. Keywords: belitung tarsiers, habitat, habitat preference, tarsier  

  4. Fine-scale habitat preference of green sturgeon (Acipenser medirostris) within three spawning locations in the Sacramento River, California

    Science.gov (United States)

    Wyman, Megan T.; Thomas, Michael J.; McDonald, Richard R.; Hearn, Alexander R.; Battleson, Ryan D.; Chapman, Eric D.; Kinzel, Paul J.; Minear, J. Tobey; Mora, Ethan A.; Nelson, Jonathan M.; Pagel, Matthew D.; Klimley, A. Peter

    2018-01-01

    Vast sections of the Sacramento River have been listed as critical habitat by the National Marine Fisheries Service for green sturgeon spawning (Acipenser medirostris), yet spawning is known to occur at only a few specific locations. This study reveals the range of physical habitat variables selected by adult green sturgeon during their spawning period. We integrated fine-scale fish positions, physical habitat characteristics, discharge, bathymetry, and simulated velocity and depth using a 2-dimensional hydraulic model (FaSTMECH). The objective was to create habitat suitability curves for depth, velocity, and substrate type within three known spawning locations over two years. An overall cumulative habitat suitability score was calculated that averaged the depth, velocity, and substrate scores over all fish, sites, and years. A weighted usable area (WUA) index was calculated throughout the sampling periods for each of the three sites. Cumulative results indicate that the microhabitat characteristics most preferred by green sturgeon in these three spawning locations were velocities between 1.0-1.1 m/s, depths of 8-9 m, and gravel and sand substrate. This study provides guidance for those who may in the future want to increase spawning habitat for green sturgeon within the Sacramento River.

  5. Sustainable forest management and habitat of diurnal raptors in the SIC Alpe della Luna-Bocca Trabaria (province of Pesaro and Urbino.

    Directory of Open Access Journals (Sweden)

    Carlo Urbinati

    2013-09-01

    Full Text Available For the definition of methodology in a naturalistic silviculture in a Site of Community Importance (Marche Region, documents relating to the physiognomic-structural data of forest vegetation and ecological requirements of 4 species of raptors (Goshawk, Sparrow hawk, Buzzard, Honey Buzzard were superimposed. A wildlife suitability index of forest habitats (IIHF was calculated, according to which forestry interventions, aimed at improving and preserving the raptor habitats, are proposed.

  6. Physiology-based modelling approaches to characterize fish habitat suitability: Their usefulness and limitations

    Science.gov (United States)

    Teal, Lorna R.; Marras, Stefano; Peck, Myron A.; Domenici, Paolo

    2018-02-01

    Models are useful tools for predicting the impact of global change on species distribution and abundance. As ectotherms, fish are being challenged to adapt or track changes in their environment, either in time through a phenological shift or in space by a biogeographic shift. Past modelling efforts have largely been based on correlative Species Distribution Models, which use known occurrences of species across landscapes of interest to define sets of conditions under which species are likely to maintain populations. The practical advantages of this correlative approach are its simplicity and the flexibility in terms of data requirements. However, effective conservation management requires models that make projections beyond the range of available data. One way to deal with such an extrapolation is to use a mechanistic approach based on physiological processes underlying climate change effects on organisms. Here we illustrate two approaches for developing physiology-based models to characterize fish habitat suitability. (i) Aerobic Scope Models (ASM) are based on the relationship between environmental factors and aerobic scope (defined as the difference between maximum and standard (basal) metabolism). This approach is based on experimental data collected by using a number of treatments that allow a function to be derived to predict aerobic metabolic scope from the stressor/environmental factor(s). This function is then integrated with environmental (oceanographic) data of current and future scenarios. For any given species, this approach allows habitat suitability maps to be generated at various spatiotemporal scales. The strength of the ASM approach relies on the estimate of relative performance when comparing, for example, different locations or different species. (ii) Dynamic Energy Budget (DEB) models are based on first principles including the idea that metabolism is organised in the same way within all animals. The (standard) DEB model aims to describe

  7. Lowland tapir distribution and habitat loss in South America

    Directory of Open Access Journals (Sweden)

    Jose Luis Passos Cordeiro

    2016-09-01

    Full Text Available The development of species distribution models (SDMs can help conservation efforts by generating potential distributions and identifying areas of high environmental suitability for protection. Our study presents a distribution and habitat map for lowland tapir in South America. We also describe the potential habitat suitability of various geographical regions and habitat loss, inside and outside of protected areas network. Two different SDM approaches, MAXENT and ENFA, produced relative different Habitat Suitability Maps for the lowland tapir. While MAXENT was efficient at identifying areas as suitable or unsuitable, it was less efficient (when compared to the results by ENFA at identifying the gradient of habitat suitability. MAXENT is a more multifaceted technique that establishes more complex relationships between dependent and independent variables. Our results demonstrate that for at least one species, the lowland tapir, the use of a simple consensual approach (average of ENFA and MAXENT models outputs better reflected its current distribution patterns. The Brazilian ecoregions have the highest habitat loss for the tapir. Cerrado and Atlantic Forest account for nearly half (48.19% of the total area lost. The Amazon region contains the largest area under protection, and the most extensive remaining habitat for the tapir, but also showed high levels of habitat loss outside protected areas, which increases the importance of support for proper management.

  8. Lowland tapir distribution and habitat loss in South America.

    Science.gov (United States)

    Cordeiro, Jose Luis Passos; Fragoso, José M V; Crawshaw, Danielle; Oliveira, Luiz Flamarion B

    2016-01-01

    The development of species distribution models (SDMs) can help conservation efforts by generating potential distributions and identifying areas of high environmental suitability for protection. Our study presents a distribution and habitat map for lowland tapir in South America. We also describe the potential habitat suitability of various geographical regions and habitat loss, inside and outside of protected areas network. Two different SDM approaches, MAXENT and ENFA, produced relative different Habitat Suitability Maps for the lowland tapir. While MAXENT was efficient at identifying areas as suitable or unsuitable, it was less efficient (when compared to the results by ENFA) at identifying the gradient of habitat suitability. MAXENT is a more multifaceted technique that establishes more complex relationships between dependent and independent variables. Our results demonstrate that for at least one species, the lowland tapir, the use of a simple consensual approach (average of ENFA and MAXENT models outputs) better reflected its current distribution patterns. The Brazilian ecoregions have the highest habitat loss for the tapir. Cerrado and Atlantic Forest account for nearly half (48.19%) of the total area lost. The Amazon region contains the largest area under protection, and the most extensive remaining habitat for the tapir, but also showed high levels of habitat loss outside protected areas, which increases the importance of support for proper management.

  9. Red River Wildlife Management Area HEP Report, Habitat Evaluation Procedures, Technical Report 2004.

    Energy Technology Data Exchange (ETDEWEB)

    Ashley, Paul

    2004-11-01

    A habitat evaluation procedures (HEP) analysis conducted on the 314-acre Red River Wildlife Management Area (RRWMA) managed by the Idaho Department of Fish and Game resulted in 401.38 habitat units (HUs). Habitat variables from six habitat suitability index (HSI) models, comprised of mink (Mustela vison), mallard (Anas platyrhynchos), common snipe (Capella gallinago), black-capped chickadee (Parus altricapillus), yellow warbler (Dendroica petechia), and white-tailed deer (Odocoileus virginianus), were measured by Regional HEP Team (RHT) members in August 2004. Cover types included wet meadow, riverine, riparian shrub, conifer forest, conifer forest wetland, and urban. HSI model outputs indicate that the shrub component is lacking in riparian shrub and conifer forest cover types and that snag density should be increased in conifer stands. The quality of wet meadow habitat, comprised primarily of introduced grass species and sedges, could be improved through development of ephemeral open water ponds and increasing the amount of persistent wetland herbaceous vegetation e.g. cattails (Typha spp.) and bulrushes (Scirpus spp.).

  10. Development of habitat suitability criteria for Neotropical stream fishes and an assessment of their transferability to streams with different conservation status

    Directory of Open Access Journals (Sweden)

    Fabrício Barreto Teresa

    Full Text Available We assessed the preference of 10 fish species for depth and velocity conditions in forested streams from southeastern Brazil using habitat suitability criteria (HSC curves. We also tested whether preference patterns observed in forested streams can be transferred to deforested streams. We used data from fish sampled in 62 five-meter sites in three forested streams to construct preference curves. Astyanax altiparanae, A. fasciatus, Knodus moenkhausii, and Piabina argentea showed a preference for deep slow habitats, whereas Aspidoras fuscoguttatus, Characidium zebra, Cetopsorhamdia iheringi, Pseudopimelodus pulcher, and Hypostomus nigromaculatus showed an opposite pattern: preference for shallow fast habitats. Hypostomus ancistroides showed a multimodal pattern of preference for depth and velocity. To evaluate whether patterns observed in forested streams may be transferred to deforested streams, we sampled 64 five-meters sites in three deforested streams using the same methodology. The preference for velocity was more consistent than for depth, as success in the transferability criterion was 86% and 29% of species, respectively. This indicates that velocity is a good predictor of species abundance in streams, regardless of their condition

  11. Environmental predictors of habitat suitability and biogeographical range of Franciscana dolphins (Pontoporia blainvillei

    Directory of Open Access Journals (Sweden)

    Jonatan J. Gomez

    2015-01-01

    Full Text Available The aim of this study was to use species distribution models to estimate the effects of environmental variables on the habitat suitability of river dolphins Pontoporia blainvillei (franciscanas along their overall biogeographical distribution. Based on the literature, we selected six environmental variables to be included in the models; four climatic factors (surface sea temperature, salinity, turbidity and productivity and two biotic factors (prey availability and fishing effort. We determined that the biographic range is under the following limits: temperature less than 19°C, a salinity of 36 psu and a minimal probability of the occurrence of fish C. guatucupa of 0.297. In the discussion, we postulate hypotheses on the behavioural and physiological mechanisms that cause these associations between environmental predictors and Franciscanas distribution. There was a good fit between the distribution predicted by the species distribution model and the one proposed by the experts of the International Union for Conservation of Nature; however, our analysis failed to highlight the fundamental role of bycatch as the main threat to this dolphin species.

  12. Development of habitat suitability criteria for Neotropical stream fishes and an assessment of their transferability to streams with different conservation status

    Directory of Open Access Journals (Sweden)

    Fabrício Barreto Teresa

    Full Text Available We assessed the preference of 10 fish species for depth and velocity conditions in forested streams from southeastern Brazil using habitat suitability criteria (HSC curves. We also tested whether preference patterns observed in forested streams can be transferred to deforested streams. We used data from fish sampled in 62 five-meter sites in three forested streams to construct preference curves. Astyanax altiparanae, A. fasciatus, Knodus moenkhausii, and Piabina argentea showed a preference for deep slow habitats, whereas Aspidoras fuscoguttatus, Characidium zebra, Cetopsorhamdia iheringi, Pseudopimelodus pulcher, and Hypostomus nigromaculatus showed an opposite pattern: preference for shallow fast habitats. Hypostomus ancistroides showed a multimodal pattern of preference for depth and velocity. To evaluate whether patterns observed in forested streams may be transferred to deforested streams, we sampled 64 five-meters sites in three deforested streams using the same methodology. The preference for velocity was more consistent than for depth, as success in the transferability criterion was 86% and 29% of species, respectively. This indicates that velocity is a good predictor of species abundance in streams, regardless of their conditionNeste estudo avaliamos a preferência de 10 espécies de peixes por condições de profundidade e fluxo em riachos florestados do sudeste do Brasil por meio do critério de adequabilidade de habitat (habitat suitability criteria - curvas HSC. Testamos também se os padrões de preferência observados nos riachos florestados podem ser transferidos para riachos desmatados. Foram realizadas amostragens da ictiofauna em 62 trechos de cinco metros de extensão em três riachos florestados para a construção das curvas de preferência. Astyanax altiparanae, A. fasciatus, Knodus moenkhausii e Piabina argentea apresentaram preferência por habitats lentos e profundos, enquanto Aspidoras fuscoguttatus, Characidium zebra

  13. Modeling freshwater snail habitat suitability and areas of potential snail-borne disease transmission in Uganda

    DEFF Research Database (Denmark)

    Stensgaard, Anna-Sofie; Jørgensen, Aslak; Kabatereine, N B

    2006-01-01

    -borne disease transmission areas. Furthermore, knowledge of abiotic factors affecting intra-molluscan parasitic development can be used to make "masks" based on remotely sensed climatic data, and these can in turn be used to refine these predictions. We used data from a recent freshwater snail survey from......Geographic information system (GIS-based modeling of an intermediate host snail species environmental requirements using known occurrence records can provide estimates of its spatial distribution. When other data are lacking, this can be used as a rough spatial prediction of potential snail...... Uganda, environmental data and the genetic algorithm for rule-set prediction (GARP) to map the potential distribution of snail species known to act as intermediate hosts of several human and animal parasites. The results suggest that large areas of Uganda are suitable habitats for many of these snail...

  14. Climate and air pollution impacts on habitat suitability of Austrian forest ecosystems.

    NARCIS (Netherlands)

    Dirnböck, Thomas; Djukic, Ika; Kitzler, Barbara; Kobler, Johannes; Mol-Dijkstra, Janet P; Posch, Max; Reinds, Gert Jan; Schlutow, Angela; Starlinger, Franz; Wamelink, Wieger G W

    2017-01-01

    Climate change and excess deposition of airborne nitrogen (N) are among the main stressors to floristic biodiversity. One particular concern is the deterioration of valuable habitats such as those protected under the European Habitat Directive. In future, climate-driven shifts (and losses) in the

  15. Climate and air pollution impacts on habitat suitability of Austrian forest ecosystems

    NARCIS (Netherlands)

    Dirnböck, Thomas; Djukic, Ika; Kitzler, Barbara; Kobler, Johannes; Mol, Janet; Posch, Max; Reinds, Gert Jan; Schlutow, Angela; Starlinger, Franz; Wamelink, Wieger G.W.

    2017-01-01

    Climate change and excess deposition of airborne nitrogen (N) are among the main stressors to floristic biodiversity. One particular concern is the deterioration of valuable habitats such as those protected under the European Habitat Directive. In future, climate-driven shifts (and losses) in the

  16. Assessing Potential Habitat and Carrying Capacity for Reintroduction of Plains Bison (Bison bison bison in Banff National Park.

    Directory of Open Access Journals (Sweden)

    Robin Steenweg

    Full Text Available Interest in bison (Bison bison, B. bonasus conservation and restoration continues to grow globally. In Canada, plains bison (B. b. bison are threatened, occupying less than 0.5% of their former range. The largest threat to their recovery is the lack of habitat in which they are considered compatible with current land uses. Fences and direct management make range expansion by most bison impossible. Reintroduction of bison into previously occupied areas that remain suitable, therefore, is critical for bison recovery in North America. Banff National Park is recognized as historical range of plains bison and has been identified as a potential site for reintroduction of a wild population. To evaluate habitat quality and assess if there is sufficient habitat for a breeding population, we developed a Habitat Suitability Index (HSI model for the proposed reintroduction and surrounding areas in Banff National Park (Banff. We then synthesize previous studies on habitat relationships, forage availability, bison energetics and snowfall scenarios to estimate nutritional carrying capacity. Considering constraints on nutritional carrying capacity, the most realistic scenario that we evaluated resulted in an estimated maximum bison density of 0.48 bison/km2. This corresponds to sufficient habitat to support at least 600 to 1000 plains bison, which could be one of the largest 10 plains bison populations in North America. Within Banff, there is spatial variation in predicted bison habitat suitability and population size that suggests one potential reintroduction site as the most likely to be successful from a habitat perspective. The successful reintroduction of bison into Banff would represent a significant global step towards conserving this iconic species, and our approach provides a useful template for evaluating potential habitat for other endangered species reintroductions into their former range.

  17. Using maximum entropy to predict suitable habitat for the endangered dwarf wedgemussel in the Maryland Coastal Plain

    Science.gov (United States)

    Campbell, Cara; Hilderbrand, Robert H.

    2017-01-01

    Species distribution modelling can be useful for the conservation of rare and endangered species. Freshwater mussel declines have thinned species ranges producing spatially fragmented distributions across large areas. Spatial fragmentation in combination with a complex life history and heterogeneous environment makes predictive modelling difficult.A machine learning approach (maximum entropy) was used to model occurrences and suitable habitat for the federally endangered dwarf wedgemussel, Alasmidonta heterodon, in Maryland's Coastal Plain catchments. Landscape-scale predictors (e.g. land cover, land use, soil characteristics, geology, flow characteristics, and climate) were used to predict the suitability of individual stream segments for A. heterodon.The best model contained variables at three scales: minimum elevation (segment scale), percentage Tertiary deposits, low intensity development, and woody wetlands (sub-catchment), and percentage low intensity development, pasture/hay agriculture, and average depth to the water table (catchment). Despite a very small sample size owing to the rarity of A. heterodon, cross-validated prediction accuracy was 91%.Most predicted suitable segments occur in catchments not known to contain A. heterodon, which provides opportunities for new discoveries or population restoration. These model predictions can guide surveys toward the streams with the best chance of containing the species or, alternatively, away from those streams with little chance of containing A. heterodon.Developed reaches had low predicted suitability for A. heterodon in the Coastal Plain. Urban and exurban sprawl continues to modify stream ecosystems in the region, underscoring the need to preserve existing populations and to discover and protect new populations.

  18. The impact of habitat fragmentation on tsetse abundance on the plateau of eastern Zambia.

    Science.gov (United States)

    Ducheyne, E; Mweempwa, C; De Pus, C; Vernieuwe, H; De Deken, R; Hendrickx, G; Van den Bossche, P

    2009-09-01

    Tsetse-transmitted human or livestock trypanosomiasis is one of the major constraints to rural development in sub-Saharan Africa. The epidemiology of the disease is determined largely by tsetse fly density. A major factor, contributing to tsetse population density is the availability of suitable habitat. In large parts of Africa, encroachment of people and their livestock resulted in a destruction and fragmentation of such suitable habitat. To determine the effect of habitat change on tsetse density a study was initiated in a tsetse-infested zone of eastern Zambia. The study area represents a gradient of habitat change, starting from a zone with high levels of habitat destruction and ending in an area where livestock and people are almost absent. To determine the distribution and density of the fly, tsetse surveys were conducted throughout the study area in the dry and in the rainy season. Landsat ETM+ imagery covering the study area were classified into four land cover classes (munga, miombo, agriculture and settlements) and two auxiliary spectral classes (clouds and shadow) using a Gaussian Maximum Likelihood Classifier. The classes were regrouped into natural vegetation and agricultural zone. The binary images were overlaid with hexagons to obtain the spatial spectrum of spatial pattern. Hexagonal coverage was selected because of its compact and regular form. To identify scale-specific spatial patterns and associated entomological phenomena, the size of the hexagonal coverage was varied (250 and 500 m). Per coverage, total class area, mean patch size, number of patches and patch size standard deviation were used as fragmentation indices. Based on the fragmentation index values, the study zone was classified using a Partitioning Around Mediods (PAM) method. The number of classes was determined using the Wilks' lambda coefficient. To determine the impact of habitat fragmentation on tsetse abundance, the correlation between the fragmentation indices and the index

  19. An approach of habitat degradation assessment for characterization on coastal habitat conservation tendency.

    Science.gov (United States)

    Zhou, Xi-Yin; Lei, Kun; Meng, Wei

    2017-09-01

    Coastal zones are population and economy highly intensity regions all over the world, and coastal habitat supports the sustainable development of human society. The accurate assessment of coastal habitat degradation is the essential prerequisite for coastal zone protection. In this study, an integrated framework of coastal habitat degradation assessment including landuse classification, habitat classifying and zoning, evaluation criterion of coastal habitat degradation and coastal habitat degradation index has been established for better regional coastal habitat assessment. Through establishment of detailed three-class landuse classification, the fine landscape change is revealed, the evaluation criterion of coastal habitat degradation through internal comparison based on the results of habitat classifying and zoning could indicate the levels of habitat degradation and distinguish the intensity of human disturbances in different habitat subareas under the same habitat classification. Finally, the results of coastal habitat degradation assessment could be achieved through coastal habitat degradation index (CHI). A case study of the framework is carried out in the Circum-Bohai-Sea-Coast, China, and the main results show the following: (1) The accuracy of all land use classes are above 90%, which indicates a satisfactory accuracy for the classification map. (2) The Circum-Bohai-Sea-Coast is divided into 3 kinds of habitats and 5 subareas. (3) In the five subareas of the Circum-Bohai-Sea-Coast, the levels of coastal habitat degradation own significant difference. The whole Circum-Bohai-Sea-Coast generally is in a worse state according to area weighting of each habitat subarea. This assessment framework of coastal habitat degradation would characterize the landuse change trend, realize better coastal habitat degradation assessment, reveal the habitat conservation tendency and distinguish intensity of human disturbances. Furthermore, it would support for accurate coastal

  20. Potential habitat distribution for the freshwater diatom Didymosphenia geminata in the continental US

    Science.gov (United States)

    Kumar, S.; Spaulding, S.A.; Stohlgren, T.J.; Hermann, K.A.; Schmidt, T.S.; Bahls, L.L.

    2009-01-01

    The diatom Didymosphenia geminata is a single-celled alga found in lakes, streams, and rivers. Nuisance blooms of D geminata affect the diversity, abundance, and productivity of other aquatic organisms. Because D geminata can be transported by humans on waders and other gear, accurate spatial prediction of habitat suitability is urgently needed for early detection and rapid response, as well as for evaluation of monitoring and control programs. We compared four modeling methods to predict D geminata's habitat distribution; two methods use presence-absence data (logistic regression and classification and regression tree [CART]), and two involve presence data (maximum entropy model [Maxent] and genetic algorithm for rule-set production [GARP]). Using these methods, we evaluated spatially explicit, bioclimatic and environmental variables as predictors of diatom distribution. The Maxent model provided the most accurate predictions, followed by logistic regression, CART, and GARP. The most suitable habitats were predicted to occur in the western US, in relatively cool sites, and at high elevations with a high base-flow index. The results provide insights into the factors that affect the distribution of D geminata and a spatial basis for the prediction of nuisance blooms. ?? The Ecological Society of America.

  1. Predicting Effects of Climate Change on Habitat Suitability of Red Spruce (Picea rubens Sarg. in the Southern Appalachian Mountains of the USA: Understanding Complex Systems Mechanisms through Modeling

    Directory of Open Access Journals (Sweden)

    Kyung Ah Koo

    2015-04-01

    Full Text Available Alpine, subalpine and boreal tree species, of low genetic diversity and adapted to low optimal temperatures, are vulnerable to the warming effects of global climate change. The accurate prediction of these species’ distributions in response to climate change is critical for effective planning and management. The goal of this research is to predict climate change effects on the distribution of red spruce (Picea rubens Sarg. in the Great Smoky Mountains National Park (GSMNP, eastern USA. Climate change is, however, conflated with other environmental factors, making its assessment a complex systems problem in which indirect effects are significant in causality. Predictions were made by linking a tree growth simulation model, red spruce growth model (ARIM.SIM, to a GIS spatial model, red spruce habitat model (ARIM.HAB. ARIM.SIM quantifies direct and indirect interactions between red spruce and its growth factors, revealing the latter to be dominant. ARIM.HAB spatially distributes the ARIM.SIM simulations under the assumption that greater growth reflects higher probabilities of presence. ARIM.HAB predicts the future habitat suitability of red spruce based on growth predictions of ARIM.SIM under climate change and three air pollution scenarios: 10% increase, no change and 10% decrease. Results show that suitable habitats shrink most when air pollution increases. Higher temperatures cause losses of most low-elevation habitats. Increased precipitation and air pollution produce acid rain, which causes loss of both low- and high-elevation habitats. The general prediction is that climate change will cause contraction of red spruce habitats at both lower and higher elevations in GSMNP, and the effects will be exacerbated by increased air pollution. These predictions provide valuable information for understanding potential impacts of global climate change on the spatiotemporal distribution of red spruce habitats in GSMNP.

  2. Evaluation of a reproductive index for estimating productivity of grassland breeding birds

    Science.gov (United States)

    Morgan, M.R.; Norment, C.; Runge, M.C.

    2010-01-01

    Declining populations of grassland breeding birds have led to increased efforts to assess habitat quality, typically by estimating density or relative abundance. Because some grassland habitats may function as ecological traps, a more appropriate metric for determining quality is breeding success, which is challenging to determine for many cryptic-nesting grassland birds. This difficulty led Vickery et al. (1992) to propose a reproductive index based on behavioral observations rather than nest fate. We rigorously evaluated the index for 2 years using a Savannah Sparrow (Passerculus sandwichensis) population in western New York and found a weak correlation in classification of the breeding stages of monitored territories among multiple observers (r = 0.398). We also discovered a large difference between overall territory and nest success rates independently estimated with the index (9.8% over the entire breeding cycle) and with nest searching and monitoring (41.7% of nests successfully fledged young). Most importantly, we made territory-level comparisons of index estimates with actual nest fate and found that the index correctly predicted fates for only 43% of the monitored nests. A Mayfield logistic regression analysis demonstrated that only index rank 4 (eggs hatched, but young failed to fledge) showed a strong positive correlation with nest success. Although the reproductive index may function as a coarse indicator of habitat suitability (e.g., documenting production in potential ecological traps), in our study the index exhibited neither internal consistency nor the ability to predict nest fate at the plot or territory level and functioned poorly as a substitute for nest searching and monitoring. ?? 2010 The American Ornithologists' Union.

  3. Linking population viability, habitat suitability, and landscape simulation models for conservation planning

    Science.gov (United States)

    Michael A. Larson; Frank R., III Thompson; Joshua J. Millspaugh; William D. Dijak; Stephen R. Shifley

    2004-01-01

    Methods for habitat modeling based on landscape simulations and population viability modeling based on habitat quality are well developed, but no published study of which we are aware has effectively joined them in a single, comprehensive analysis. We demonstrate the application of a population viability model for ovenbirds (Seiurus aurocapillus)...

  4. Using forest inventory data to assess fisher resting habitat suitability in California.

    Science.gov (United States)

    William J. Zielinski; Richard L. Truex; Jeffrey R. Dunk; Tom Gaman

    2006-01-01

    The fisher (Martes pennanti) is a forest-dwelling carnivore whose current distribution and association with late-seral forest conditions make it vulnerable to stand-altering human activities or natural disturbances. Fishers select a variety of structures for daily resting bouts. These habitat elements, together with foraging and reproductive (denning) habitat,...

  5. A simple solar radiation index for wildlife habitat studies

    Science.gov (United States)

    Keating, Kim A.; Gogan, Peter J.; Vore, John N.; Irby, Lynn R.

    2007-01-01

    Solar radiation is a potentially important covariate in many wildlife habitat studies, but it is typically addressed only indirectly, using problematic surrogates like aspect or hillshade. We devised a simple solar radiation index (SRI) that combines readily available information about aspect, slope, and latitude. Our SRI is proportional to the amount of extraterrestrial solar radiation theoretically striking an arbitrarily oriented surface during the hour surrounding solar noon on the equinox. Because it derives from first geometric principles and is linearly distributed, SRI offers clear advantages over aspect-based surrogates. The SRI also is superior to hillshade, which we found to be sometimes imprecise and ill-behaved. To illustrate application of our SRI, we assessed niche separation among 3 ungulate species along a single environmental axis, solar radiation, on the northern Yellowstone winter range. We detected no difference between the niches occupied by bighorn sheep (Ovis canadensis) and elk (Cervus elaphus; P = 0.104), but found that mule deer (Odocoileus hemionus) tended to use areas receiving more solar radiation than either of the other species (P solar radiation component.

  6. Importance of tracks on habitat use characterization of Medium and Big mammals in Los Mangos Forest (Puerto Lopez, Meta, Colombia)

    International Nuclear Information System (INIS)

    Guzman Lenis, Angelica; Camargo Sanabria, Angela

    2004-01-01

    Tracks and signs are very useful for detecting medium and big mammals, which usually are out of sight. These are helpful tools on field investigation, provide detailed information on the identity and activities of an animal in a place, and can provide us indications of their habitat use (Aranda, 1981a; Navarro and Munoz, 2000; Villalba and Yanosky, 2000). In this paper we characterize the habitat use of medium and big land mammals in Los Mangos Forest. We use an observation and track tramp transect, and a modification of the Habitat Suitability Index (HSI) for evaluating habitat suitability. We detect six burrows, four footprints and five Seje palm (Oenocarpus batagua) feeding places, in addition to ten tracks compiled along the other days of field investigation. We recognized ten species of mammals, which belong to five orders, using tracks and bitted fruits. The HSI calculated was 7.30 on inner forest, indicating that the habitat is appropriate for animals, which use burrows. Resources like food (insects, fruits and preys), refuge, water and resting places converges generating favorable environment for immigration and residence of insectivore, frugivore and carnivore mammals. The fertile plane forest is an important habitat of this area because present there. It offers quality resources to the animal species in there

  7. Diet, abundance and distribution as indices of turbot ( Psetta maxima L.) release habitat suitability

    DEFF Research Database (Denmark)

    Sparrevohn, Claus Reedtz; Støttrup, Josianne

    2008-01-01

    , natural abundance, and depth distribution within the habitats. A marked difference was found among habitats in the timing of the diet change from the suboptimal exoskeleton carrying prey items such as crustaceans to fish. The habitat where the wild turbot had the lowest occurrence of fish in their diet...

  8. Spatially explicit modeling of annual and seasonal habitat for greater sage-grouse (Centrocercus urophasianus) in Nevada and Northeastern California—An updated decision-support tool for management

    Science.gov (United States)

    Coates, Peter S.; Casazza, Michael L.; Brussee, Brianne E.; Ricca, Mark A.; Gustafson, K. Benjamin; Sanchez-Chopitea, Erika; Mauch, Kimberly; Niell, Lara; Gardner, Scott; Espinosa, Shawn; Delehanty, David J.

    2016-05-20

    Successful adaptive management hinges largely upon integrating new and improved sources of information as they become available. As a timely example of this tenet, we updated a management decision support tool that was previously developed for greater sage-grouse (Centrocercus urophasianus, hereinafter referred to as “sage-grouse”) populations in Nevada and California. Specifically, recently developed spatially explicit habitat maps derived from empirical data played a key role in the conservation of this species facing listing under the Endangered Species Act. This report provides an updated process for mapping relative habitat suitability and management categories for sage-grouse in Nevada and northeastern California (Coates and others, 2014, 2016). These updates include: (1) adding radio and GPS telemetry locations from sage-grouse monitored at multiple sites during 2014 to the original location dataset beginning in 1998; (2) integrating output from high resolution maps (1–2 m2) of sagebrush and pinyon-juniper cover as covariates in resource selection models; (3) modifying the spatial extent of the analyses to match newly available vegetation layers; (4) explicit modeling of relative habitat suitability during three seasons (spring, summer, winter) that corresponded to critical life history periods for sage-grouse (breeding, brood-rearing, over-wintering); (5) accounting for differences in habitat availability between more mesic sagebrush steppe communities in the northern part of the study area and drier Great Basin sagebrush in more southerly regions by categorizing continuous region-wide surfaces of habitat suitability index (HSI) with independent locations falling within two hydrological zones; (6) integrating the three seasonal maps into a composite map of annual relative habitat suitability; (7) deriving updated land management categories based on previously determined cut-points for intersections of habitat suitability and an updated index of sage

  9. Bioprospecting and indexing the microalgal diversity of different ecological habitats of India.

    Science.gov (United States)

    Ratha, Sachitra Kumar; Prasanna, Radha; Gupta, Vishal; Dhar, Dolly Wattal; Saxena, Anil Kumar

    2012-04-01

    Our study reports the collection, biodiversity analyses, isolation and identification of microalgae from different habitats of India. Cyanophyceae and Chlorophyceae were the most dominant algal groups recorded, with the highest number being recorded for non-heterocystous cyanobacteria (48), followed by 44 unicellular forms. Sagar Island, Sunderbans recorded the greatest number of algae, and unicellular/colonial green algae were present in all the samples. Shannon's Diversity Index was highest in Koikhali, Sunderbans, followed by Rushikulya River, Odisha. Selective enrichment, purification through serial dilution followed by plating and regular observations led to the isolation of sixteen strains. Identification was done by using microscopic observations, supported with standard monographs and classified as belonging to seven genera (Chlorella, Chlorococcum, Kirchneria, Scenedesmus, Chlamydomonas, Tetracystis and Ulothrix). 18S rDNA sequencing was undertaken for four strains. The set of sixteen strains were screened under standard cultural conditions for their growth kinetics and Chlorella sorokiniana MIC-G5, followed by Chlorella sp. MIC-G4 exhibited the highest growth rates. The strain Chlorococcum sp. MIC-G2 recorded highest chlorophyll, while MIC-G3 ranked highest for carbohydrates. The study aided in identifying the dominant microalgae in the diverse habitats and characterizing their growth rate and carbohydrate content, providing a valuable germplasm for further utilization in agriculture and industry.

  10. Measurement of the carrying capacity of benthic habitats using a metabolic-rate based index.

    Science.gov (United States)

    Edgar, G J

    1993-03-01

    Carrying capacities of grazed habitats are typically expressed as numbers or biomass of animals per unit area; however, such parameters are appropriate only when the body size of animals is constant because consumption and other metabolic-rate based parameters such as respiration and production are proportional to body mass raised by a power of ≈0.75 rather than 0 or 1. Habitat carrying levels are therefore better expressed in the form of an index of total community consumption by summing the body masses of individual animals after they have been scaled using a biomass exponent of ≈0.75. A parameter scaled in this way,P 20 , varied in a predictable manner when calculated for the mobile epifaunal assemblages associated with rope fibre habitats placed at marine and estuarine sites;P 20 showed no significant difference between 17 shallow, clear-water sites worldwide, but declined consistently when photosynthesis was reduced.P 20 also did not vary significantly when calculated for the mobile epifaunal communities associated with fourAmphibolis antarctica seagrass habitats in Australia ([Formula: see text] = 100 µg ·g -1 · day -1 ), and reached but did not significantly exceed a ceiling of ≈280 μg · g -1 · day -1 forSargassum plants. These results are consistent with the hypothesis that the production of shallow-water epifaunal communities of grazers is constrained by resource ceilings which can be quantified using metabolic-rate based indices. If this "production ceiling" hypothesis is correct then diffuse competition is generally more important than predation or environmental disturbance in restricting the growth of mobile epifaunal populations.

  11. Impact of Alternative Environmental Flow Prescriptions on Hydropower Production and Fish Habitat Suitability

    Science.gov (United States)

    Castellarin, A.; Ceola, S.; Pugliese, A.; Galeati, G. A.

    2015-12-01

    Anthropogenic activities along streams and rivers are increasingly recognized to be a major concern for fluvial ecosystems. The management of water resources, by means of e.g. flow diversions and dams, for industrial, agricultural, water-supply, hydropower production and flood protection purposes induces significant changes to the natural streamflow regime of a river. Indeed, the river flow regime is known to be a major abiotic factor influencing fluvial ecosystems. An established approach aimed at preserving the behaviour and distribution of fluvial species relies on the definition of minimum streamflow requirements (i.e., environmental flows) downstream of dams and diversion structures. Such environmental flows are normally identified through methodologies that have an empirical nature and may not be representative of local ecological and hydraulic conditions. While the effect of imposing a minimum discharge release is easily predictable in terms of e.g. loss of hydropower production, the advantages in terms of species preferences are often poorly understood and seldom assessed. To analyze the interactions between flow releases and the behaviour and distribution of fluvial species (i.e., from periphyton, to benthic invertebrate and fish), one may use a habitat suitability curve, which is a fundamental tool capable of describing species preferences influenced by any generic environmental variable. The outcomes of a real case study applied to several Italian rivers, located in the Marche administrative district in Central Italy (∽10000km2), in which we quantitatively assess the effects of alternative environmental flow scenarios on the existing hydropower network and on two fish species that are quite abundant in the study area (i.e., Leuciscus cephalus cabeda and Barbus barbus plebejus), will be presented and discussed. The proposed analysis, which can be easily adapted to different riparian habitats and hydrological contexts, is a useful tool to guide the

  12. Integrating animal movement with habitat suitability for estimating dynamic landscape connectivity

    Science.gov (United States)

    van Toor, Mariëlle L.; Kranstauber, Bart; Newman, Scott H.; Prosser, Diann J.; Takekawa, John Y.; Technitis, Georgios; Weibel, Robert; Wikelski, Martin; Safi, Kamran

    2018-01-01

    Context High-resolution animal movement data are becoming increasingly available, yet having a multitude of empirical trajectories alone does not allow us to easily predict animal movement. To answer ecological and evolutionary questions at a population level, quantitative estimates of a species’ potential to link patches or populations are of importance. Objectives We introduce an approach that combines movement-informed simulated trajectories with an environment-informed estimate of the trajectories’ plausibility to derive connectivity. Using the example of bar-headed geese we estimated migratory connectivity at a landscape level throughout the annual cycle in their native range. Methods We used tracking data of bar-headed geese to develop a multi-state movement model and to estimate temporally explicit habitat suitability within the species’ range. We simulated migratory movements between range fragments, and calculated a measure we called route viability. The results are compared to expectations derived from published literature. Results Simulated migrations matched empirical trajectories in key characteristics such as stopover duration. The viability of the simulated trajectories was similar to that of the empirical trajectories. We found that, overall, the migratory connectivity was higher within the breeding than in wintering areas, corroborating previous findings for this species. Conclusions We show how empirical tracking data and environmental information can be fused for meaningful predictions of animal movements throughout the year and even outside the spatial range of the available data. Beyond predicting migratory connectivity, our framework will prove useful for modelling ecological processes facilitated by animal movement, such as seed dispersal or disease ecology.

  13. Evaluation of osprey habitat suitability and interaction with contaminant exposure

    Science.gov (United States)

    Toschik, P.C.; Christman, M.C.; Rattner, B.A.; Ottinger, M.A.

    2006-01-01

    Ospreys (Pandion haliaetus) have been the focus of conservation efforts since their dramatic population decline attributed to dichlorodiphenyltrichloroethane and related chemicals in the 1960s. Several recent studies of ospreys nesting in the United States have indicated improved reproduction. However, the density of breeding ospreys varies greatly among locations, with some areas seemingly habitable but not occupied. Because of concerns about pollution in the highly industrialized portions of the Delaware River and Bay, USA, we evaluated contaminant exposure and productivity in ospreys nesting on the Delaware River and Bay in 2002. We characterized habitat in the coastal zone of Delaware, USA, and the area around the river in Pennsylvania, USA, using data we collected as well as extant information provided by state and federal sources. We characterized habitat based on locations of occupied osprey nests in Delaware and Pennsylvania. We evaluated water clarity, water depth, land use and land cover, nest availability, and contaminants in sediment for use in a nest-occupancy model. Our results demonstrated that the presence of occupied nests was associated with water depth, water clarity, distance to an occupied osprey nest, and presence of urban land use, whereas a companion study demonstrated that hatching success was associated with the principal components derived from organochlorine-contaminant concentrations in osprey eggs (total polychlorinated biphenyls, p,p'-dichlorodiphenylethylene, chlordane and metabolites, and heptachlor epoxide). Our study provides guidelines for resource managers and local conservation organizations in management of ospreys and in development of habitat models that are appropriate for other piscivorous and marsh-nesting birds.

  14. Water-quality models to assess algal community dynamics, water quality, and fish habitat suitability for two agricultural land-use dominated lakes in Minnesota, 2014

    Science.gov (United States)

    Smith, Erik A.; Kiesling, Richard L.; Ziegeweid, Jeffrey R.

    2017-07-20

    Fish habitat can degrade in many lakes due to summer blue-green algal blooms. Predictive models are needed to better manage and mitigate loss of fish habitat due to these changes. The U.S. Geological Survey (USGS), in cooperation with the Minnesota Department of Natural Resources, developed predictive water-quality models for two agricultural land-use dominated lakes in Minnesota—Madison Lake and Pearl Lake, which are part of Minnesota’s sentinel lakes monitoring program—to assess algal community dynamics, water quality, and fish habitat suitability of these two lakes under recent (2014) meteorological conditions. The interaction of basin processes to these two lakes, through the delivery of nutrient loads, were simulated using CE-QUAL-W2, a carbon-based, laterally averaged, two-dimensional water-quality model that predicts distribution of temperature and oxygen from interactions between nutrient cycling, primary production, and trophic dynamics.The CE-QUAL-W2 models successfully predicted water temperature and dissolved oxygen on the basis of the two metrics of mean absolute error and root mean square error. For Madison Lake, the mean absolute error and root mean square error were 0.53 and 0.68 degree Celsius, respectively, for the vertical temperature profile comparisons; for Pearl Lake, the mean absolute error and root mean square error were 0.71 and 0.95 degree Celsius, respectively, for the vertical temperature profile comparisons. Temperature and dissolved oxygen were key metrics for calibration targets. These calibrated lake models also simulated algal community dynamics and water quality. The model simulations presented potential explanations for persistently large total phosphorus concentrations in Madison Lake, key differences in nutrient concentrations between these lakes, and summer blue-green algal bloom persistence.Fish habitat suitability simulations for cool-water and warm-water fish indicated that, in general, both lakes contained a large

  15. Landscape Metrics to Assess Habitat Suitability for Conversation Bird Species in the Southeastern United States

    National Research Council Canada - National Science Library

    Dove, Linda

    2001-01-01

    .... The degree to which a given species is affected by habitat fragmentation is dependent on the complex interaction of the habitat requirements of the species and the shape, size, and makeup of the fragmented habitat...

  16. Niche suitability affects development: skull asymmetry increases in less suitable areas.

    Directory of Open Access Journals (Sweden)

    Renan Maestri

    Full Text Available For conservation purposes, it is important to take into account the suitability of a species to particular habitats; this information may predict the long-term survival of a species. In this sense, morphological measures of developmental stress, such as fluctuating asymmetry, can be proxies for an individual's performance in different regions. In this study, we conducted tests to determine whether areas with different levels of suitability for a species (generated by ecological niche models were congruent with morphological markers that reflect environmental stress and morphological variance. We generated a Maxent niche model and compared the suitability assessments of several areas with the skull morphology data (fluctuating asymmetry and morphological disparity of populations of the Atlantic forest endemic to Brazil rodent Akodon cursor. Our analyses showed a significant negative relationship between suitability levels and fluctuating asymmetry levels, which indicates that in less suitable areas, the individuals experience numerous disturbances during skull ontogeny. We have not found an association between morphological variance and environmental suitability. As expected, these results suggest that in environments with a lower suitability, developmental stress is increased. Such information is helpful in the understanding of the species evolution and in the selection of priority areas for the conservation of species.

  17. Asian elephants in China: estimating population size and evaluating habitat suitability.

    Directory of Open Access Journals (Sweden)

    Li Zhang

    Full Text Available We monitored the last remaining Asian elephant populations in China over the past decade. Using DNA tools and repeat genotyping, we estimated the population sizes from 654 dung samples collected from various areas. Combined with morphological individual identifications from over 6,300 elephant photographs taken in the wild, we estimated that the total Asian elephant population size in China is between 221 and 245. Population genetic structure and diversity were examined using a 556-bp fragment of mitochondrial DNA, and 24 unique haplotypes were detected from DNA analysis of 178 individuals. A phylogenetic analysis revealed two highly divergent clades of Asian elephants, α and β, present in Chinese populations. Four populations (Mengla, Shangyong, Mengyang, and Pu'Er carried mtDNA from the α clade, and only one population (Nangunhe carried mtDNA belonging to the β clade. Moreover, high genetic divergence was observed between the Nangunhe population and the other four populations; however, genetic diversity among the five populations was low, possibly due to limited gene flow because of habitat fragmentation. The expansion of rubber plantations, crop cultivation, and villages along rivers and roads had caused extensive degradation of natural forest in these areas. This had resulted in the loss and fragmentation of elephant habitats and had formed artificial barriers that inhibited elephant migration. Using Geographic Information System, Global Positioning System, and Remote Sensing technology, we found that the area occupied by rubber plantations, tea farms, and urban settlements had dramatically increased over the past 40 years, resulting in the loss and fragmentation of elephant habitats and forming artificial barriers that inhibit elephant migration. The restoration of ecological corridors to facilitate gene exchange among isolated elephant populations and the establishment of cross-boundary protected areas between China and Laos to secure

  18. Spatially explicit feedbacks between seagrass meadow structure, sediment and light: Habitat suitability for seagrass growth

    Science.gov (United States)

    Carr, Joel; D'Odorico, Paul; McGlathery, Karen; Wiberg, Patricia L.

    2016-01-01

    In shallow coastal bays where nutrient loading and riverine inputs are low, turbidity, and the consequent light environment are controlled by resuspension of bed sediments due to wind-waves and tidal currents. High sediment resuspension and low light environments can limit benthic primary productivity; however, both currents and waves are affected by the presence of benthic plants such as seagrass. This feedback between the presence of benthic primary producers such as seagrass and the consequent light environment has been predicted to induce bistable dynamics locally. However, these vegetated areas influence a larger area than they footprint, including a barren adjacent downstream area which exhibits reduced shear stresses. Here we explore through modeling how the patchy structure of seagrass meadows on a landscape may affect sediment resuspension and the consequent light environment due to the presence of this sheltered region. Heterogeneous vegetation covers comprising a mosaic of randomly distributed patches were generated to investigate the effect of patch modified hydrodynamics. Actual cover of vegetation on the landscape was used to facilitate comparisons across landscape realizations. Hourly wave and current shear stresses on the landscape along with suspended sediment concentration and light attenuation characteristics were then calculated and spatially averaged to examine how actual cover and mean water depth affect the bulk sediment and light environment. The results indicate that an effective cover, which incorporates the sheltering area, has important controls on the distributions of shear stress, suspended sediment, light environment, and consequent seagrass habitat suitability. Interestingly, an optimal habitat occurs within a depth range where, if actual cover is reduced past some threshold, the bulk light environment would no longer favor seagrass growth.

  19. Field Validation of Habitat Suitability Models for Vulnerable Marine Ecosystems in the South Pacific Ocean: Implications for the use of Broad-scale Models in Fisheries Management

    Science.gov (United States)

    Anderson, O. F.; Guinotte, J. M.; Clark, M. R.; Rowden, A. A.; Mormede, S.; Davies, A. J.; Bowden, D.

    2016-02-01

    Spatial management of vulnerable marine ecosystems requires accurate knowledge of their distribution. Predictive habitat suitability modelling, using species presence data and a suite of environmental predictor variables, has emerged as a useful tool for inferring distributions outside of known areas. However, validation of model predictions is typically performed with non-independent data. In this study, we describe the results of habitat suitability models constructed for four deep-sea reef-forming coral species across a large region of the South Pacific Ocean using MaxEnt and Boosted Regression Tree modelling approaches. In order to validate model predictions we conducted a photographic survey on a set of seamounts in an un-sampled area east of New Zealand. The likelihood of habitat suitable for reef forming corals on these seamounts was predicted to be variable, but very high in some regions, particularly where levels of aragonite saturation, dissolved oxygen, and particulate organic carbon were optimal. However, the observed frequency of coral occurrence in analyses of survey photographic data was much lower than expected, and patterns of observed versus predicted coral distribution were not highly correlated. The poor performance of these broad-scale models is attributed to lack of recorded species absences to inform the models, low precision of global bathymetry models, and lack of data on the geomorphology and substrate of the seamounts at scales appropriate to the modelled taxa. This demonstrates the need to use caution when interpreting and applying broad-scale, presence-only model results for fisheries management and conservation planning in data poor areas of the deep sea. Future improvements in the predictive performance of broad-scale models will rely on the continued advancement in modelling of environmental predictor variables, refinements in modelling approaches to deal with missing or biased inputs, and incorporation of true absence data.

  20. Assessment and mapping of tradeoffs land uses in the Orangutan habitat: A case Pongo pygmeus pygmeus habitat of West Kalimantan

    Science.gov (United States)

    Siregar, P. G.; Supriatna, J.; Koestoer, R. H.; Harmantyo, D.

    2017-07-01

    This study aims to analyse trade-offs among 6 (six) types of dominant land uses to consider Orangutan livelihood and landscape sustainability. The results of this study assists landscape's planners and policy makers for selecting development scenarios as well as policy within the landscape, especially to reduce human and wildlife conflict as impact of development. This study was conducted in Orangutan sub species Pongo pygmeus pygmeus habitat in West Kalimantan, Indonesia. Net present value analysis was applied to identify economic profit of land uses and also perspective of expert judgment was applied to identify suitability of the land uses to Orangutan livelihood. The study shows that palm oil plantation was the dominant land use type in non-forest area category and natural forest is in forest area category within the site. Palm oil contributed highest economic profit (average IDR 11 Million per year) compared to other land use types, and thus the worst land use type for supporting Orangutan conservation; index suitability for Orangutan achieved only 21.8. The development of agroforestry which planted more than 3 valuable economic commodities is used as an alternative in forest buffer area development that can provide better gain for economic and Orangutan conservation with index suitability for Orangutan was 43.5. In achieving sustainability at the landscape level, it needs to consider the sustainability of the umbrella species, such as Orangutan. The existence of the umbrella species would also protect other biodiversity, forest and its environmental services.

  1. Spatially explicit modeling of greater sage-grouse (Centrocercus urophasianus) habitat in Nevada and northeastern California: a decision-support tool for management

    Science.gov (United States)

    Coates, Peter S.; Casazza, Michael L.; Brussee, Brianne E.; Ricca, Mark A.; Gustafson, K. Benjamin; Overton, Cory T.; Sanchez-Chopitea, Erika; Kroger, Travis; Mauch, Kimberly; Niell, Lara; Howe, Kristy; Gardner, Scott; Espinosa, Shawn; Delehanty, David J.

    2014-01-01

    Greater sage-grouse (Centrocercus urophasianus, hereafter referred to as “sage-grouse”) populations are declining throughout the sagebrush (Artemisia spp.) ecosystem, including millions of acres of potential habitat across the West. Habitat maps derived from empirical data are needed given impending listing decisions that will affect both sage-grouse population dynamics and human land-use restrictions. This report presents the process for developing spatially explicit maps describing relative habitat suitability for sage-grouse in Nevada and northeastern California. Maps depicting habitat suitability indices (HSI) values were generated based on model-averaged resource selection functions informed by more than 31,000 independent telemetry locations from more than 1,500 radio-marked sage-grouse across 12 project areas in Nevada and northeastern California collected during a 15-year period (1998–2013). Modeled habitat covariates included land cover composition, water resources, habitat configuration, elevation, and topography, each at multiple spatial scales that were relevant to empirically observed sage-grouse movement patterns. We then present an example of how the HSI can be delineated into categories. Specifically, we demonstrate that the deviation from the mean can be used to classify habitat suitability into three categories of habitat quality (high, moderate, and low) and one non-habitat category. The classification resulted in an agreement of 93–97 percent for habitat versus non-habitat across a suite of independent validation datasets. Lastly, we provide an example of how space use models can be integrated with habitat models to help inform conservation planning. In this example, we combined probabilistic breeding density with a non-linear probability of occurrence relative to distance to nearest lek (traditional breeding ground) using count data to calculate a composite space use index (SUI). The SUI was then classified into two categories of use

  2. Modeling Habitat Suitability of Migratory Birds from Remote Sensing Images Using Convolutional Neural Networks.

    Science.gov (United States)

    Su, Jin-He; Piao, Ying-Chao; Luo, Ze; Yan, Bao-Ping

    2018-04-26

    With the application of various data acquisition devices, a large number of animal movement data can be used to label presence data in remote sensing images and predict species distribution. In this paper, a two-stage classification approach for combining movement data and moderate-resolution remote sensing images was proposed. First, we introduced a new density-based clustering method to identify stopovers from migratory birds’ movement data and generated classification samples based on the clustering result. We split the remote sensing images into 16 × 16 patches and labeled them as positive samples if they have overlap with stopovers. Second, a multi-convolution neural network model is proposed for extracting the features from temperature data and remote sensing images, respectively. Then a Support Vector Machines (SVM) model was used to combine the features together and predict classification results eventually. The experimental analysis was carried out on public Landsat 5 TM images and a GPS dataset was collected on 29 birds over three years. The results indicated that our proposed method outperforms the existing baseline methods and was able to achieve good performance in habitat suitability prediction.

  3. Two-dimensional physical habitat modeling of effects of habitat structures on urban stream restoration

    Directory of Open Access Journals (Sweden)

    Dongkyun Im

    2011-12-01

    Full Text Available River corridors, even if highly modified or degraded, still provide important habitats for numerous biological species, and carry high aesthetic and economic values. One of the keys to urban stream restoration is recovery and maintenance of ecological flows sufficient to sustain aquatic ecosystems. In this study, the Hongje Stream in the Seoul metropolitan area of Korea was selected for evaluating a physically-based habitat with and without habitat structures. The potential value of the aquatic habitat was evaluated by a weighted usable area (WUA using River2D, a two-dimensional hydraulic model. The habitat suitability for Zacco platypus in the Hongje Stream was simulated with and without habitat structures. The computed WUA values for the boulder, spur dike, and riffle increased by about 2%, 7%, and 131%, respectively, after their construction. Also, the three habitat structures, especially the riffle, can contribute to increasing hydraulic heterogeneity and enhancing habitat diversity.

  4. Impacts of temperature on giant panda habitat in the north Minshan Mountains.

    Science.gov (United States)

    Liu, Gang; Guan, Tianpei; Dai, Qiang; Li, Huixin; Gong, Minghao

    2016-02-01

    Understanding the impacts of meteorological factors on giant pandas is necessary for future conservation measures in response to global climate change. We integrated temperature data with three main habitat parameters (elevation, vegetation type, and bamboo species) to evaluate the influence of climate change on giant panda habitat in the northern Minshan Mountains using a habitat assessment model. Our study shows that temperature (relative importance = 25.1%) was the second most important variable influencing giant panda habitat excepting the elevation. There was a significant negative correlation between temperature and panda presence (ρ = -0.133, P pandas within the study area was 18-21°C, followed by 15-17°C and 22-24°C. The overall suitability of giant panda habitats will increase by 2.7%, however, it showed a opposite variation patterns between the eastern and northwestern region of the study area. Suitable and subsuitable habitats in the northwestern region of the study area, which is characterized by higher elevation and latitude, will increase by 18007.8 hm(2) (9.8% habitat suitability), while the eastern region will suffer a decrease of 9543.5 hm(2) (7.1% habitat suitability). Our results suggest that increasing areas of suitable giant panda habitat will support future giant panda expansion, and food shortage and insufficient living space will not arise as problems in the northwest Minshan Mountains, which means that giant pandas can adapt to climate change, and therefore may be resilient to climate change. Thus, for the safety and survival of giant pandas in the Baishuijiang Reserve, we propose strengthening the giant panda monitoring program in the west and improving the integrity of habitats to promote population dispersal with adjacent populations in the east.

  5. Transplantation assessment of degraded Posidonia oceanica habitats: site selection and long-term monitoring

    Directory of Open Access Journals (Sweden)

    M. PIRROTTA

    2014-09-01

    Full Text Available A model developed for Zostera marina was adapted and used to select suitable areas for Posidonia oceanica transplantation in the Gulf of Palermo, where recent rehabilitation programmes have reduced human pressure. This model consists of three steps: (1 habitat selection, by calculation of the Preliminary Transplant Suitability Index (PTSI; (2 field assessments and test-transplanting, to evaluate the site suitability and to estimate the effects of tearing on transplant units (about 50%; (3 identification of suitable restoration sites, by calculation of the Transplant Suitability Index (TSI. A new parameter was added to the literature model: the number of grids detached, which is linked to factors (hydrodynamic regime, anchoring, fishing that have a potentially great effect on the final outcome of the transplant. Only one site (TSI = 16 in the Gulf of Palermo was indicated as potentially suitable for restoration with P. oceanica. In this site, a transplant of 40 m2 was implemented. From 2008 to 2014, transplant effectiveness was evaluated in terms of establishment, detachment and mortality of cuttings and shoot density. The long-term monitoring (6 years allowed us to detect changes in the structural conditions of the transplanted meadow and to identify the possible turning point in P. oceanica recovery (2 years after transplanting. Moreover, 6 years after transplantation the P. oceanica meadow has exceeded the transplant shoot density of about 16%, with a mean and a maximum value of 11.6 and 17 shoots per cutting, respectively.

  6. Modeling Impacts of Climate Change on Giant Panda Habitat

    Directory of Open Access Journals (Sweden)

    Melissa Songer

    2012-01-01

    Full Text Available Giant pandas (Ailuropoda melanoleuca are one of the most widely recognized endangered species globally. Habitat loss and fragmentation are the main threats, and climate change could significantly impact giant panda survival. We integrated giant panda habitat information with general climate models (GCMs to predict future geographic distribution and fragmentation of giant panda habitat. Results support a major general prediction of climate change—a shift of habitats towards higher elevation and higher latitudes. Our models predict climate change could reduce giant panda habitat by nearly 60% over 70 years. New areas may become suitable outside the current geographic range but much of these areas is far from the current giant panda range and only 15% fall within the current protected area system. Long-term survival of giant pandas will require the creation of new protected areas that are likely to support suitable habitat even if the climate changes.

  7. The Invasive Species Forecasting System (ISFS): An iRODS-Based, Cloud-Enabled Decision Support System for Invasive Species Habitat Suitability Modeling

    Science.gov (United States)

    Gill, Roger; Schnase, John L.

    2012-01-01

    The Invasive Species Forecasting System (ISFS) is an online decision support system that allows users to load point occurrence field sample data for a plant species of interest and quickly generate habitat suitability maps for geographic regions of interest, such as a national park, monument, forest, or refuge. Target customers for ISFS are natural resource managers and decision makers who have a need for scientifically valid, model- based predictions of the habitat suitability of plant species of management concern. In a joint project involving NASA and the Maryland Department of Natural Resources, ISFS has been used to model the potential distribution of Wavyleaf Basketgrass in Maryland's Chesapeake Bay Watershed. Maximum entropy techniques are used to generate predictive maps using predictor datasets derived from remotely sensed data and climate simulation outputs. The workflow to run a model is implemented in an iRODS microservice using a custom ISFS file driver that clips and re-projects data to geographic regions of interest, then shells out to perform MaxEnt processing on the input data. When the model completes, all output files and maps from the model run are registered in iRODS and made accessible to the user. The ISFS user interface is a web browser that uses the iRODS PHP client to interact with the ISFS/iRODS- server. ISFS is designed to reside in a VMware virtual machine running SLES 11 and iRODS 3.0. The ISFS virtual machine is hosted in a VMware vSphere private cloud infrastructure to deliver the online service.

  8. Sage-grouse habitat selection during winter in Alberta

    Science.gov (United States)

    Carpenter, Jennifer L.; Aldridge, Cameron L.; Boyce, Mark S.

    2010-01-01

    Greater sage-grouse (Centrocercus urophasianus) are dependent on sagebrush (Artemisia spp.) for food and shelter during winter, yet few studies have assessed winter habitat selection, particularly at scales applicable to conservation planning. Small changes to availability of winter habitats have caused drastic reductions in some sage-grouse populations. We modeled winter habitat selection by sage-grouse in Alberta, Canada, by using a resource selection function. Our purpose was to 1) generate a robust winter habitat-selection model for Alberta sage-grouse; 2) spatially depict habitat suitability in a Geographic Information System to identify areas with a high probability of selection and thus, conservation importance; and 3) assess the relative influence of human development, including oil and gas wells, in landscape models of winter habitat selection. Terrain and vegetation characteristics, sagebrush cover, anthropogenic landscape features, and energy development were important in top Akaike's Information Criterionselected models. During winter, sage-grouse selected dense sagebrush cover and homogenous less rugged areas, and avoided energy development and 2-track truck trails. Sage-grouse avoidance of energy development highlights the need for comprehensive management strategies that maintain suitable habitats across all seasons. ?? 2010 The Wildlife Society.

  9. An analysis of the habitat of the Greater One-horned Rhinoceros Rhinoceros unicorns (Mammalia: Perissodactyla: Rhinocerotidae at the Chitwan National Park, Nepal

    Directory of Open Access Journals (Sweden)

    V. Thapa

    2014-09-01

    Full Text Available We used Geographic Information Systems (GIS and landscape-level data obtained from remote sensing sources to build a habitat suitability index model (HSI for the Greater One-horned Rhinoceros Rhinoceros unicornis. The model was based primarily on important habitat requisites of the modeled species, especially food and cover. We extracted food and cover from land cover map and ran focal statistics to determine their proportion in a neighborhood of 70x70 pixels that accounts for the animal’s average mean annual home range, which is ~4km2 = 400 ha = 70x70 pixels x 900 m2 = 4410000/10000 = 441 ha. We used two arbitrarily selected parameters a and Tc to observe the impacts of food and cover on the HSI. We performed sensitivity analysis by varying values of parameters around their nominal, which revealed that the HSI value of a pixel is changed with uncertainty with very low values of a fraction of the food or cover. We identified four habitat types from the HSI map. We used patch and class metrics of FRAGSTATS program to estimate the amount and fragmentation of each habitat type. The metrics provided composition and configuration status for all four habitat types. We found a presence of a total of 476 patches with 517.82km2 belonging to suitable habitat type. These areas can be targeted for management, monitoring and improvement to provide habitat for the target and sympatric species.

  10. Gulf-Wide Information System, Environmental Sensitivity Index Habitats Database, Geographic NAD83, LDWF (2001) [esi_habitats_LDWF_2001

    Data.gov (United States)

    Louisiana Geographic Information Center — This data set contains sensitive biological resource data for coastal habitats in Louisiana. Vector polygons represent various habitats, including marsh types, other...

  11. Incorporating the Spatial Road Disturbance Index (SPROADI in Ecological Impacts Assessment of Roads at Landscape Scale (Case study: Eastern Part of Isfahan Province

    Directory of Open Access Journals (Sweden)

    Sh. Nematollahi

    2017-06-01

    Full Text Available Development of roads can have deleterious effects on natural habitats containing species of conservation concern. Fragmentation of habitat into small, non-contiguous patches may result in dramatic population declines. Thus appropriate studies quantifying ecological impacts of roads at landscape scale are essential. In this study, the Spatial Road Disturbance Index (SPROADI was applied for the ecological impact assessment of the roads network in Eastern part of Isfahan Province, including Abassabad wildlife refuge and Siahkouh National park, which are among the most important habitats for Asiatic Cheetah (Acinonyx jubatus venaticus classified as Critically Endangered (CR on the IUCN Red List. This new landscape index uses three sub-indices including traffic intensity, vicinity impact and fragmentation grade to calculate the ecological impacts of roads network. Results obtained through quantifying the Spatial Road Disturbance Index showed that the degree of disturbance by roads network is between 0 and 54.53. Our results also revealed that 12 percent of Abassabad wildlife refuge and wide range of suitable habitats for Asiatic Cheetah were affected by roads network, which presents a conservation concern for this critically endangered species.

  12. Resource use of Japanese macaques in heavy snowfall areas: implications for habitat management.

    Science.gov (United States)

    Enari, Hiroto; Sakamaki-Enari, Haruka

    2013-07-01

    Populations of Japanese macaque (Macaca fuscata) that inhabit the northernmost distribution of any nonhuman primates have been listed as endangered in Japan; however, macaques are widely known for being pests that cause agricultural damage. This study identified priority areas for the conservation and management of macaque habitats, by comparing the resource use of troops occupying remote mountains (montane troops) against troops inhabiting disturbed forests adjacent to settlements (rural troops). We collected species presence data across 2 years by radio-tracking two montane troops and two rural troops in the Shirakami Mountains. We developed seasonal utilization distributions by using the kernel method, and identified habitat characteristics by using ecological-niche factor analysis (ENFA). Our results indicate that environmental factors influencing the potential habitat varied widely with season in montane troops as compared with that in rural troops. ENFA results demonstrated that rural troops exhibited more biased resource use and narrower niche breadths than montane troops. Based on our findings, we propose that (1) primary broadleaf forests are the spring habitat conservation priority of montane troops; (2) the habitat unit--the product of habitat suitability index and its surface area--for montane troops is enhanced by removing old conifer plantations from the forest edge at low elevations; (3) such removal around settlements may also contribute toward removing a frontline refuge for rural troops intruding farmlands; and (4) intensive prevention measures against macaque intrusions into settlements during the bottleneck snowy season contribute toward reducing the habitat unit of rural troops.

  13. Use of Occupancy Models to Evaluate Expert Knowledge-based Species-Habitat Relationships

    Directory of Open Access Journals (Sweden)

    Monica N. Iglecia

    2012-12-01

    Full Text Available Expert knowledge-based species-habitat relationships are used extensively to guide conservation planning, particularly when data are scarce. Purported relationships describe the initial state of knowledge, but are rarely tested. We assessed support in the data for suitability rankings of vegetation types based on expert knowledge for three terrestrial avian species in the South Atlantic Coastal Plain of the United States. Experts used published studies, natural history, survey data, and field experience to rank vegetation types as optimal, suitable, and marginal. We used single-season occupancy models, coupled with land cover and Breeding Bird Survey data, to examine the hypothesis that patterns of occupancy conformed to species-habitat suitability rankings purported by experts. Purported habitat suitability was validated for two of three species. As predicted for the Eastern Wood-Pewee (Contopus virens and Brown-headed Nuthatch (Sitta pusilla, occupancy was strongly influenced by vegetation types classified as "optimal habitat" by the species suitability rankings for nuthatches and wood-pewees. Contrary to predictions, Red-headed Woodpecker (Melanerpes erythrocephalus models that included vegetation types as covariates received similar support by the data as models without vegetation types. For all three species, occupancy was also related to sampling latitude. Our results suggest that covariates representing other habitat requirements might be necessary to model occurrence of generalist species like the woodpecker. The modeling approach described herein provides a means to test expert knowledge-based species-habitat relationships, and hence, help guide conservation planning.

  14. Evaluation of habitat quality for selected wildlife species associated with back channels.

    Science.gov (United States)

    Anderson, James T.; Zadnik, Andrew K.; Wood, Petra Bohall; Bledsoe, Kerry

    2013-01-01

    The islands and associated back channels on the Ohio River, USA, are believed to provide critical habitat features for several wildlife species. However, few studies have quantitatively evaluated habitat quality in these areas. Our main objective was to evaluate the habitat quality of back and main channel areas for several species using habitat suitability index (HSI) models. To test the effectiveness of these models, we attempted to relate HSI scores and the variables measured for each model with measures of relative abundance for the model species. The mean belted kingfisher (Ceryle alcyon) HSI was greater on the main than back channel. However, the model failed to predict kingfisher abundance. The mean reproduction component of the great blue heron (Ardea herodias) HSI, total common muskrat (Ondatra zibethicus) HSI, winter cover component of the snapping turtle (Chelydra serpentina) HSI, and brood-rearing component of the wood duck (Aix sponsa) HSI were all greater on the back than main channel, and were positively related with the relative abundance of each species. We found that island back channels provide characteristics not found elsewhere on the Ohio River and warrant conservation as important riparian wildlife habitat. The effectiveness of using HSI models to predict species abundance on the river was mixed. Modifications to several of the models are needed to improve their use on the Ohio River and, likely, other large rivers.

  15. The energetic consequences of habitat structure for forest stream salmonids.

    Science.gov (United States)

    Naman, Sean M; Rosenfeld, Jordan S; Kiffney, Peter M; Richardson, John S

    2018-05-08

    1.Increasing habitat availability (i.e. habitat suitable for occupancy) is often assumed to elevate the abundance or production of mobile consumers; however, this relationship is often nonlinear (threshold or unimodal). Identifying the mechanisms underlying these nonlinearities is essential for predicting the ecological impacts of habitat change, yet the functional forms and ultimate causation of consumer-habitat relationships are often poorly understood. 2.Nonlinear effects of habitat on animal abundance may manifest through physical constraints on foraging that restrict consumers from accessing their resources. Subsequent spatial incongruence between consumers and resources should lead to unimodal or saturating effects of habitat availability on consumer production if increasing the area of habitat suitable for consumer occupancy comes at the expense of habitats that generate resources. However, the shape of this relationship could be sensitive to cross-ecosystem prey subsidies, which may be unrelated to recipient habitat structure and result in more linear habitat effects on consumer production. 3.We investigated habitat-productivity relationships for juveniles of stream-rearing Pacific salmon and trout (Oncorhynchus spp.), which typically forage in low-velocity pool habitats, while their prey (drifting benthic invertebrates) are produced upstream in high-velocity riffles. However, juvenile salmonids also consume subsidies of terrestrial invertebrates that may be independent of pool-riffle structure. 4.We measured salmonid biomass production in 13 experimental enclosures each containing a downstream pool and upstream riffle, spanning a gradient of relative pool area (14-80% pool). Increasing pool relative to riffle habitat area decreased prey abundance, leading to a nonlinear saturating effect on fish production. We then used bioenergetics model simulations to examine how the relationship between pool area and salmonid biomass is affected by varying levels of

  16. Human Use Index

    Data.gov (United States)

    U.S. Environmental Protection Agency — Human land uses may have major impacts on ecosystems, affecting biodiversity, habitat, air and water quality. The human use index (also known as U-index) is the...

  17. Inter-annual variability of North Sea plaice spawning habitat

    Science.gov (United States)

    Loots, C.; Vaz, S.; Koubbi, P.; Planque, B.; Coppin, F.; Verin, Y.

    2010-11-01

    Potential spawning habitat is defined as the area where environmental conditions are suitable for spawning to occur. Spawning adult data from the first quarter (January-March) of the International Bottom Trawl Survey have been used to study the inter-annual variability of the potential spawning habitat of North Sea plaice from 1980 to 2007. Generalised additive models (GAM) were used to create a model that related five environmental variables (depth, bottom temperature and salinity, seabed stress and sediment type) to presence-absence and abundance of spawning adults. Then, the habitat model was applied each year from 1970 to 2007 to predict inter-annual variability of the potential spawning habitat. Predicted responses obtained by GAM for each year were mapped using kriging. A hierarchical classification associated with a correspondence analysis was performed to cluster spawning suitable areas and to determine how they evolved across years. The potential spawning habitat was consistent with historical spawning ground locations described in the literature from eggs surveys. It was also found that the potential spawning habitat varied across years. Suitable areas were located in the southern part of the North Sea and along the eastern coast of England and Scotland in the eighties; they expanded further north from the nineties. Annual survey distributions did not show such northward expansion and remained located in the southern North Sea. This suggests that this species' actual spatial distribution remains stable against changing environmental conditions, and that the potential spawning habitat is not fully occupied. Changes in environmental conditions appear to remain within plaice environmental ranges, meaning that other factors may control the spatial distribution of plaice spawning habitat.

  18. Landsat ETM+ and SRTM Data Provide Near Real-Time Monitoring of Chimpanzee (Pan troglodytes Habitats in Africa

    Directory of Open Access Journals (Sweden)

    Samuel M. Jantz

    2016-05-01

    Full Text Available All four chimpanzee sub-species populations are declining due to multiple factors including human-caused habitat loss. Effective conservation efforts are therefore needed to ensure their long-term survival. Habitat suitability models serve as useful tools for conservation planning by depicting relative environmental suitability in geographic space over time. Previous studies mapping chimpanzee habitat suitability have been limited to small regions or coarse spatial and temporal resolutions. Here, we used Random Forests regression to downscale a coarse resolution habitat suitability calibration dataset to estimate habitat suitability over the entire chimpanzee range at 30-m resolution. Our model predicted habitat suitability well with an r2 of 0.82 (±0.002 based on 50-fold cross validation where 75% of the data was used for model calibration and 25% for model testing; however, there was considerable variation in the predictive capability among the four sub-species modeled individually. We tested the influence of several variables derived from Landsat Enhanced Thematic Mapper Plus (ETM+ that included metrics of forest canopy and structure for four three-year time periods between 2000 and 2012. Elevation, Landsat ETM+ band 5 and Landsat derived canopy cover were the strongest predictors; highly suitable areas were associated with dense tree canopy cover for all but the Nigeria-Cameroon and Central Chimpanzee sub-species. Because the models were sensitive to such temporally based predictors, our results are the first to highlight the value of integrating continuously updated variables derived from satellite remote sensing into temporally dynamic habitat suitability models to support  near real-time monitoring of habitat status and decision support systems.

  19. Predicting Greater Prairie-Chicken Lek Site Suitability to Inform Conservation Actions.

    Directory of Open Access Journals (Sweden)

    Torre J Hovick

    Full Text Available The demands of a growing human population dictates that expansion of energy infrastructure, roads, and other development frequently takes place in native rangelands. Particularly, transmission lines and roads commonly divide rural landscapes and increase fragmentation. This has direct and indirect consequences on native wildlife that can be mitigated through thoughtful planning and proactive approaches to identifying areas of high conservation priority. We used nine years (2003-2011 of Greater Prairie-Chicken (Tympanuchus cupido lek locations totaling 870 unique leks sites in Kansas and seven geographic information system (GIS layers describing land cover, topography, and anthropogenic structures to model habitat suitability across the state. The models obtained had low omission rates (0.81, indicating high model performance and reliability of predicted habitat suitability for Greater Prairie-Chickens. We found that elevation was the most influential in predicting lek locations, contributing three times more predictive power than any other variable. However, models were improved by the addition of land cover and anthropogenic features (transmission lines, roads, and oil and gas structures. Overall, our analysis provides a hierarchal understanding of Greater Prairie-Chicken habitat suitability that is broadly based on geomorphological features followed by land cover suitability. We found that when land features and vegetation cover are suitable for Greater Prairie-Chickens, fragmentation by anthropogenic sources such as roadways and transmission lines are a concern. Therefore, it is our recommendation that future human development in Kansas avoid areas that our models identified as highly suitable for Greater Prairie-Chickens and focus development on land cover types that are of lower conservation concern.

  20. GIS habitat analysis for lesser prairie-chickens in southeastern New Mexico

    OpenAIRE

    Johnson, Kristine; Neville, Teri B; Neville, Paul

    2006-01-01

    Abstract Background We conducted Geographic Information System (GIS) habitat analyses for lesser prairie-chicken (LPCH, Tympanuchus pallidicinctus) conservation planning. The 876,799 ha study area included most of the occupied habitat for the LPCH in New Mexico. The objectives were to identify and quantify: 1. suitable LPCH habitat in New Mexico, 2. conversion of native habitats, 3. potential for habitat restoration, and 4. unsuitable habitat available for oil and gas activities. Results We f...

  1. Habitat suitability models of mountain ungulates: identifying potential areas for conservation

    Czech Academy of Sciences Publication Activity Database

    Paudel, Prakash K.; Hais, M.; Kindlmann, Pavel

    2015-01-01

    Roč. 54, apr (2015), s. 37 ISSN 1021-5506 R&D Projects: GA MŠk(CZ) LO1415; GA MŠk LC06073; GA ČR GB14-36098G Institutional support: RVO:67179843 Keywords : capricornis thar * habitat model * Midhills * Muntiacus muntjak * Naemorhedus goral * Nepal Subject RIV: EH - Ecology, Behaviour Impact factor: 0.885, year: 2015

  2. Habitat fragmentation in arid zones: a case study of Linaria nigricans under land use changes (SE Spain).

    Science.gov (United States)

    Peñas, Julio; Benito, Blas; Lorite, Juan; Ballesteros, Miguel; Cañadas, Eva María; Martinez-Ortega, Montserrat

    2011-07-01

    Habitat fragmentation due to human activities is one of the most important causes of biodiversity loss. In Mediterranean areas the species have co-evolved with traditional farming, which has recently been replaced for more severe and aggressive practices. We use a methodological approach that enables the evaluation of the impact that agriculture and land use changes have for the conservation of sensitive species. As model species, we selected Linaria nigricans, a critically endangered plant from arid and semiarid ecosystems in south-eastern Spain. A chronosequence of the evolution of the suitable habitat for the species over more than 50 years has been reconstructed and several geometrical fragmentation indices have been calculated. A new index called fragmentation cadence (FC) is proposed to quantify the historical evolution of habitat fragmentation regardless of the habitat size. The application of this index has provided objective forecasting of the changes of each remnant population of L. nigricans. The results indicate that greenhouses and construction activities (mainly for tourist purposes) exert a strong impact on the populations of this endangered species. The habitat depletion showed peaks that constitute the destruction of 85% of the initial area in only 20 years for some populations of L. nigricans. According to the forecast established by the model, a rapid extinction could take place and some populations may disappear as early as the year 2030. Fragmentation-cadence analysis can help identify population units of primary concern for its conservation, by means of the adoption of improved management and regulatory measures.

  3. Deep Space Habitat Concept Demonstrator

    Science.gov (United States)

    Bookout, Paul S.; Smitherman, David

    2015-01-01

    This project will develop, integrate, test, and evaluate Habitation Systems that will be utilized as technology testbeds and will advance NASA's understanding of alternative deep space mission architectures, requirements, and operations concepts. Rapid prototyping and existing hardware will be utilized to develop full-scale habitat demonstrators. FY 2014 focused on the development of a large volume Space Launch System (SLS) class habitat (Skylab Gen 2) based on the SLS hydrogen tank components. Similar to the original Skylab, a tank section of the SLS rocket can be outfitted with a deep space habitat configuration and launched as a payload on an SLS rocket. This concept can be used to support extended stay at the Lunar Distant Retrograde Orbit to support the Asteroid Retrieval Mission and provide a habitat suitable for human missions to Mars.

  4. Determining Home Range and Preferred Habitat of Feral Horses on the Nevada National Security Site Using Geographic Information Systems

    Energy Technology Data Exchange (ETDEWEB)

    Burns, Ashley V. [Univ. of Denver, CO (United States)

    2014-05-30

    Feral horses (Equus caballus) are free-roaming descendants of domesticated horses and legally protected by the Wild and Free-Roaming Horses and Burros Act of 1971, which mandates how feral horses and burros should be managed and protected on federal lands. Using a geographic information system to determine the home range and suitable habitat of feral horses on the federally managed Nevada National Security Site can enable wildlife biologists in making best management practice recommendations. Home range was estimated at 88.1 square kilometers. Site suitability was calculated for elevation, forage, slope, water presence and horse observations. These variables were combined in successive iterations into one polygon. Suitability rankings established that 85 square kilometers are most suitable habitat, with 2,052 square kilometers of good habitat 1,252 square kilometers of fair habitat and 122 square kilometers of least suitable habitat.

  5. TINGKAT KESESUAIAN SUAKA MARGASATWA CIKEPUH SEBAGAI HABITAT KEDUA BADAK JAWA (Rhinoceros sondaicus Desmarest, 1822

    Directory of Open Access Journals (Sweden)

    Ribai .

    2016-01-01

    Full Text Available Javan rhino (Rhinoceros sondaicus is one of the rarest species in the world so categorized as critically endangered by IUCN. Survival of the rhino in Ujung Kulon National Park is threatened by a variety of factors that could cause these extinct animals, such as: invasion langkap, competition with the bulls, and inbreeding. The strategy should be promoted in maintaining and developing population that is making a second habitat. The purpose of this research is to know the suitability level of Cikepuh Wildlife Reserves (CWR as javan rhino’s second habitat. The method used is the field observations. Results showed that the CWR have high suitability as javan rhino’s second habitat with an area of 6886.4 ha (84.72% CWR. Cikepuh Wildlife Reserves components that have a high potential as second habitat are on aspects altitude, air temperature, humidity, water availability, and soil pH. Strategies that can be done in improving the suitability of the CWR as second habitat includ: create pools ofthe rhino, planting food plants that have a high palatability and reduce human pressure through strict enforcement, public education, standardized regular patrols, rehabilitation and enrichment of degraded area, livestock expenses , and review the MoU regarding the use of the area as a military Cikepuh SM. Keywords: Cikepuh Wildlife Reserve, habitat suitability, javan rhino, second habitat

  6. Defining landscape resistance values in least-cost connectivity models for the invasive grey squirrel: a comparison of approaches using expert-opinion and habitat suitability modelling.

    Science.gov (United States)

    Stevenson-Holt, Claire D; Watts, Kevin; Bellamy, Chloe C; Nevin, Owen T; Ramsey, Andrew D

    2014-01-01

    Least-cost models are widely used to study the functional connectivity of habitat within a varied landscape matrix. A critical step in the process is identifying resistance values for each land cover based upon the facilitating or impeding impact on species movement. Ideally resistance values would be parameterised with empirical data, but due to a shortage of such information, expert-opinion is often used. However, the use of expert-opinion is seen as subjective, human-centric and unreliable. This study derived resistance values from grey squirrel habitat suitability models (HSM) in order to compare the utility and validity of this approach with more traditional, expert-led methods. Models were built and tested with MaxEnt, using squirrel presence records and a categorical land cover map for Cumbria, UK. Predictions on the likelihood of squirrel occurrence within each land cover type were inverted, providing resistance values which were used to parameterise a least-cost model. The resulting habitat networks were measured and compared to those derived from a least-cost model built with previously collated information from experts. The expert-derived and HSM-inferred least-cost networks differ in precision. The HSM-informed networks were smaller and more fragmented because of the higher resistance values attributed to most habitats. These results are discussed in relation to the applicability of both approaches for conservation and management objectives, providing guidance to researchers and practitioners attempting to apply and interpret a least-cost approach to mapping ecological networks.

  7. Defining landscape resistance values in least-cost connectivity models for the invasive grey squirrel: a comparison of approaches using expert-opinion and habitat suitability modelling.

    Directory of Open Access Journals (Sweden)

    Claire D Stevenson-Holt

    Full Text Available Least-cost models are widely used to study the functional connectivity of habitat within a varied landscape matrix. A critical step in the process is identifying resistance values for each land cover based upon the facilitating or impeding impact on species movement. Ideally resistance values would be parameterised with empirical data, but due to a shortage of such information, expert-opinion is often used. However, the use of expert-opinion is seen as subjective, human-centric and unreliable. This study derived resistance values from grey squirrel habitat suitability models (HSM in order to compare the utility and validity of this approach with more traditional, expert-led methods. Models were built and tested with MaxEnt, using squirrel presence records and a categorical land cover map for Cumbria, UK. Predictions on the likelihood of squirrel occurrence within each land cover type were inverted, providing resistance values which were used to parameterise a least-cost model. The resulting habitat networks were measured and compared to those derived from a least-cost model built with previously collated information from experts. The expert-derived and HSM-inferred least-cost networks differ in precision. The HSM-informed networks were smaller and more fragmented because of the higher resistance values attributed to most habitats. These results are discussed in relation to the applicability of both approaches for conservation and management objectives, providing guidance to researchers and practitioners attempting to apply and interpret a least-cost approach to mapping ecological networks.

  8. Geospatial distribution modeling and determining suitability of groundwater quality for irrigation purpose using geospatial methods and water quality index (WQI) in Northern Ethiopia

    Science.gov (United States)

    Gidey, Amanuel

    2018-06-01

    Determining suitability and vulnerability of groundwater quality for irrigation use is a key alarm and first aid for careful management of groundwater resources to diminish the impacts on irrigation. This study was conducted to determine the overall suitability of groundwater quality for irrigation use and to generate their spatial distribution maps in Elala catchment, Northern Ethiopia. Thirty-nine groundwater samples were collected to analyze and map the water quality variables. Atomic absorption spectrophotometer, ultraviolet spectrophotometer, titration and calculation methods were used for laboratory groundwater quality analysis. Arc GIS, geospatial analysis tools, semivariogram model types and interpolation methods were used to generate geospatial distribution maps. Twelve and eight water quality variables were used to produce weighted overlay and irrigation water quality index models, respectively. Root-mean-square error, mean square error, absolute square error, mean error, root-mean-square standardized error, measured values versus predicted values were used for cross-validation. The overall weighted overlay model result showed that 146 km2 areas are highly suitable, 135 km2 moderately suitable and 60 km2 area unsuitable for irrigation use. The result of irrigation water quality index confirms 10.26% with no restriction, 23.08% with low restriction, 20.51% with moderate restriction, 15.38% with high restriction and 30.76% with the severe restriction for irrigation use. GIS and irrigation water quality index are better methods for irrigation water resources management to achieve a full yield irrigation production to improve food security and to sustain it for a long period, to avoid the possibility of increasing environmental problems for the future generation.

  9. An artificial water body provides habitat for an endangered estuarine seahorse species

    Science.gov (United States)

    Claassens, Louw

    2016-10-01

    Anthropogenic development, especially the transformation of natural habitats to artificial, is a growing concern within estuaries and coastal areas worldwide. Thesen Islands marina, an artificial water body, added 25 ha of new estuarine habitat to the Knysna Estuary in South Africa, home to the Knysna seahorse. This study aimed to answer: (I) Can an artificial water body provide suitable habitat for an endangered seahorse species? And if so (II) what characteristics of this new habitat are important in terms of seahorse utilization? Four major habitat types were identified within the marina canals: (I) artificial reno mattress (wire baskets filled with rocks); (II) Codium tenue beds; (III) mixed vegetation on sediment; and (IV) barren canal floor. Seahorses were found throughout the marina system with significantly higher densities within the reno mattress habitat. The artificial water body, therefore, has provided suitable habitat for Hippocampus capensis, a noteworthy finding in the current environment of coastal development and the increasing shift from natural to artificial.

  10. Predicting freshwater habitat integrity using land-use surrogates

    African Journals Online (AJOL)

    2007-04-02

    Apr 2, 2007 ... Quantification of potential surrogates of freshwater habitat integrity. We chose a series of land-use variables that might be suitable predictors for assessing freshwater habitat integrity from the land cover map (CSIR 2005) and added separate GIS surfaces for human population density and the distribution of ...

  11. Modeling habitat suitability of the invasive clam Corbicula fluminea in a Neotropical shallow lagoon, southern Brazil

    Directory of Open Access Journals (Sweden)

    T. C. L. Silveira

    Full Text Available Abstract This study aimed to model the habitat suitability for an invasive clam Corbicula fluminea in a coastal shallow lagoon in the southern Neotropical region (–30.22, –50.55. The lagoon (19km2, maximum deep 2.5m was sampled with an Ekman dredge in an orthogonal matrix comprising 84 points. At each sampling point, were obtained environmental descriptors as depth, organic matter content (OMC, average granulometry (Avgran, and the percentage of sand (Pcsand. Prediction performance of Generalized Linear Models (GLM, Generalized Additive Models (GAM and Boosted Regression Tree (BRT were compared. Also, niche overlapping with other native clam species (Castalia martensi, Neocorbicula limosa and Anodontites trapesialis was examined. A BRT model with 1400 trees was selected as the best model, with cross-validated correlation of 0.82. The relative contributions of predictors were Pcsand-42.6%, OMC-35.8%, Avgran-10.9% and Depth-10.8%. Were identified that C. fluminea occur mainly in sandy sediments with few organic matter, in shallow areas nor by the shore. The PCA showed a wide niche overlap with the native clam species C. martensi, N. limosa and A. trapesialis.

  12. Oldman River Dam wildlife habitat mitigation program, Pincher Creek, Alberta: Final report. Summary of the implementation phase, 1987--1993

    International Nuclear Information System (INIS)

    1998-01-01

    This article summarizes the 1987--1993 implementation phase of the Oldman River Dam Wildlife Habitat Mitigation Program, intended to offset the negative impact of dam construction and operation on plant and animal species. Projects carried out during the program included creation of wetlands, tree and shrub planting, installation of snow and wildlife fences, and installation of replacement nesting sites for birds. Summaries are provided of the process that led to the final program design, the projects undertaken to complete the program, the design strategies, and the proposed habitat mitigation projects. Also included are an inventory of completed projects, an evaluation of the program's success in meeting its objectives and of the mitigation techniques used in the program, and a recommended strategy for future management of the program. Appendices include habitat suitability index models, summaries of related reports, vegetation maps, and a grazing management plan

  13. Predicting occurrence of juvenile shark habitat to improve conservation planning.

    Science.gov (United States)

    Oh, Beverly Z L; Sequeira, Ana M M; Meekan, Mark G; Ruppert, Jonathan L W; Meeuwig, Jessica J

    2017-06-01

    Fishing and habitat degradation have increased the extinction risk of sharks, and conservation strategies recognize that survival of juveniles is critical for the effective management of shark populations. Despite the rapid expansion of marine protected areas (MPAs) globally, the paucity of shark-monitoring data on large scales (100s-1000s km) means that the effectiveness of MPAs in halting shark declines remains unclear. Using data collected by baited remote underwater video systems (BRUVS) in northwestern Australia, we developed generalized linear models to elucidate the ecological drivers of habitat suitability for juvenile sharks. We assessed occurrence patterns at the order and species levels. We included all juvenile sharks sampled and the 3 most abundant species sampled separately (grey reef [Carcharhinus amblyrhynchos], sandbar [Carcharhinus plumbeus], and whitetip reef sharks [Triaenodon obesus]). We predicted the occurrence of juvenile sharks across 490,515 km 2 of coastal waters and quantified the representation of highly suitable habitats within MPAs. Our species-level models had higher accuracy (ĸ ≥ 0.69) and deviance explained (≥48%) than our order-level model (ĸ = 0.36 and deviance explained of 10%). Maps of predicted occurrence revealed different species-specific patterns of highly suitable habitat. These differences likely reflect different physiological or resource requirements between individual species and validate concerns over the utility of conservation targets based on aggregate species groups as opposed to a species-focused approach. Highly suitable habitats were poorly represented in MPAs with the most restrictions on extractive activities. This spatial mismatch possibly indicates a lack of explicit conservation targets and information on species distribution during the planning process. Non-extractive BRUVS provided a useful platform for building the suitability models across large scales to assist conservation planning across

  14. Human Use Index (Future)

    Data.gov (United States)

    U.S. Environmental Protection Agency — Human land uses may have major impacts on ecosystems, affecting biodiversity, habitat, air and water quality. The human use index (also known as U-index) is the...

  15. Habitat quality influences population distribution, individual space use and functional responses in habitat selection by a large herbivore.

    Science.gov (United States)

    Bjørneraas, Kari; Herfindal, Ivar; Solberg, Erling Johan; Sæther, Bernt-Erik; van Moorter, Bram; Rolandsen, Christer Moe

    2012-01-01

    Identifying factors shaping variation in resource selection is central for our understanding of the behaviour and distribution of animals. We examined summer habitat selection and space use by 108 Global Positioning System (GPS)-collared moose in Norway in relation to sex, reproductive status, habitat quality, and availability. Moose selected habitat types based on a combination of forage quality and availability of suitable habitat types. Selection of protective cover was strongest for reproducing females, likely reflecting the need to protect young. Males showed strong selection for habitat types with high quality forage, possibly due to higher energy requirements. Selection for preferred habitat types providing food and cover was a positive function of their availability within home ranges (i.e. not proportional use) indicating functional response in habitat selection. This relationship was not found for unproductive habitat types. Moreover, home ranges with high cover of unproductive habitat types were larger, and smaller home ranges contained higher proportions of the most preferred habitat type. The distribution of moose within the study area was partly related to the distribution of different habitat types. Our study shows how distribution and availability of habitat types providing cover and high-quality food shape ungulate habitat selection and space use.

  16. Ultra-Fine Scale Spatially-Integrated Mapping of Habitat and Occupancy Using Structure-From-Motion.

    Directory of Open Access Journals (Sweden)

    Philip McDowall

    Full Text Available Organisms respond to and often simultaneously modify their environment. While these interactions are apparent at the landscape extent, the driving mechanisms often occur at very fine spatial scales. Structure-from-Motion (SfM, a computer vision technique, allows the simultaneous mapping of organisms and fine scale habitat, and will greatly improve our understanding of habitat suitability, ecophysiology, and the bi-directional relationship between geomorphology and habitat use. SfM can be used to create high-resolution (centimeter-scale three-dimensional (3D habitat models at low cost. These models can capture the abiotic conditions formed by terrain and simultaneously record the position of individual organisms within that terrain. While coloniality is common in seabird species, we have a poor understanding of the extent to which dense breeding aggregations are driven by fine-scale active aggregation or limited suitable habitat. We demonstrate the use of SfM for fine-scale habitat suitability by reconstructing the locations of nests in a gentoo penguin colony and fitting models that explicitly account for conspecific attraction. The resulting digital elevation models (DEMs are used as covariates in an inhomogeneous hybrid point process model. We find that gentoo penguin nest site selection is a function of the topography of the landscape, but that nests are far more aggregated than would be expected based on terrain alone, suggesting a strong role of behavioral aggregation in driving coloniality in this species. This integrated mapping of organisms and fine scale habitat will greatly improve our understanding of fine-scale habitat suitability, ecophysiology, and the complex bi-directional relationship between geomorphology and habitat use.

  17. Global estimation of areas with suitable environmental conditions for mariculture species.

    Directory of Open Access Journals (Sweden)

    Muhammed A Oyinlola

    Full Text Available Aquaculture has grown rapidly over the last three decades expanding at an average annual growth rate of 5.8% (2005-2014, down from 8.8% achieved between 1980 and 2010. The sector now produces 44% of total food fish production. Increasing demand and consumption from a growing global population are driving further expansion of both inland and marine aquaculture (i.e., mariculture, including marine species farmed on land. However, the growth of mariculture is dependent on the availability of suitable farming areas for new facilities, particularly for open farming practices that rely on the natural oceanic environmental parameters such as temperature, oxygen, chlorophyll etc. In this study, we estimated the marine areas within the exclusive economic zones of all countries that were suitable for potential open ocean mariculture activities. To this end, we quantify the environmental niche and inferred the global habitat suitability index (HSI of the 102 most farmed marine species using four species distribution models. The average weighted HSI across the four models suggests that 72,000,000 km2 of ocean are to be environmentally suitable to farm one or more species. About 92% of the predicted area (66,000,000 km2 is environmentally suitable for farming finfish, 43% (31,000,000 km2 for molluscs and 54% (39,000,000 km2 for crustaceans. These predictions do not consider technological feasibility that can limit crustaceans farming in open waters. Suitable mariculture areas along the Atlantic coast of South America and West Africa appear to be most under-utilized for farming. Our results suggest that factors other than environmental considerations such as the lack of socio-economic and technological capacity, as well as aqua feed supply are currently limiting the potential for mariculture expansion in many areas.

  18. Quantification of habitat fragmentation reveals extinction risk in terrestrial mammals

    Science.gov (United States)

    Crooks, Kevin R.; Burdett, Christopher L.; Theobald, David M.; King, Sarah R. B.; Rondinini, Carlo; Boitani, Luigi

    2017-01-01

    Although habitat fragmentation is often assumed to be a primary driver of extinction, global patterns of fragmentation and its relationship to extinction risk have not been consistently quantified for any major animal taxon. We developed high-resolution habitat fragmentation models and used phylogenetic comparative methods to quantify the effects of habitat fragmentation on the world’s terrestrial mammals, including 4,018 species across 26 taxonomic Orders. Results demonstrate that species with more fragmentation are at greater risk of extinction, even after accounting for the effects of key macroecological predictors, such as body size and geographic range size. Species with higher fragmentation had smaller ranges and a lower proportion of high-suitability habitat within their range, and most high-suitability habitat occurred outside of protected areas, further elevating extinction risk. Our models provide a quantitative evaluation of extinction risk assessments for species, allow for identification of emerging threats in species not classified as threatened, and provide maps of global hotspots of fragmentation for the world’s terrestrial mammals. Quantification of habitat fragmentation will help guide threat assessment and strategic priorities for global mammal conservation. PMID:28673992

  19. Habitat selection of Tragulus napu and Tragulus javanicus using MaxEnt analysis

    Science.gov (United States)

    Taher, Taherah Mohd; Lihan, Tukimat; Mustapha, Muzzneena Ahmad; Nor, Shukor Mohd

    2018-04-01

    Large areas are converted into commercial land use such as agriculture and urban as a result from the increasing economic and population demand. This situation is largely affecting wildlife and its habitat. Malaysia as one of the largest oil palm-producing countries, should take precaution into conserving its forest and wildlife diversity. Although big mammal such as elephant and tiger are significant for wildlife diversity, medium and small mammals also contribute to the biological richness in Malaysia. This study aims to predict suitable habitat of medium mammal, Tragulus napu and Tragulus javanicus in the study area and identify its habitat characteristics. The method applied in this study uses maximum entropy (MaxEnt) modeling which utilized species distribution data and selected environmental variables to alienate potential habitat in the study area. The characteristic of the habitat was identified from the result of MaxEnt analysis. This method of habitat modeling shows different extent of predicted suitable habitat in the study area of both species in which Tragulus napu has a limited distribution compared to Tragulus javanicus. However, some characteristics are similar in both habitats. The knowledge on species habitat characteristics is important to predict wildlife habitat in order to make best decision on land use management and conservation.

  20. Natural Propagation and Habitat Improvement, Volume I, Oregon, Supplement C, White River Habitat Inventory, 1983 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Heller, David

    1984-04-01

    More than 130 miles of stream fish habitat was inventoried and evaluated on the Mt. Hood National Forest during the first year of this multi-year project. First year tasks included field inventory and evaluation of habitat conditions on the White River and tributary streams thought to have the highest potential for supporting anadromous fish populations. All streams inventoried were located on the Mt. Hood National Forest. The surveyed area appears to contain most of the high quality anadromous fish habitat in the drainage. Habitat conditions appear suitable for steelhead, coho, and chinook salmon, and possibly sockeye. One hundred and twenty-four miles of potential anadromous fish habitat were identifed in the survey. Currently, 32 miles of this habitat would be readily accessible to anadromous fish. An additional 72 miles of habitat could be accessed with only minor passage improvement work. About 20 miles of habitat, however, will require major investment to provide fish passage. Three large lakes (Boulder, 14 acres; Badger, 45 acres; Clear, 550 acres) appear to be well-suited for rearing anadromous fish, although passage enhancement would be needed before self-sustaining runs could be established in any of the lakes.

  1. Habitat evaluation for outbreak of Yangtze voles (Microtus fortis) and management implications.

    Science.gov (United States)

    Xu, Zhenggang; Zhao, Yunlin; Li, Bo; Zhang, Meiwen; Shen, Guo; Wang, Yong

    2015-05-01

    Rodent pests severely damage agricultural crops. Outbreak risk models of rodent pests often do not include sufficient information regarding geographic variation. Habitat plays an important role in rodent-pest outbreak risk, and more information about the relationship between habitat and crop protection is urgently needed. The goal of the present study was to provide an outbreak risk map for the Dongting Lake region and to understand the relationship between rodent-pest outbreak variation and habitat distribution. The main rodent pests in the Dongting Lake region are Yangtze voles (Microtus fortis). These pests cause massive damage in outbreak years, most notably in 2007. Habitat evaluation and ecological details were obtained by analyzing the correlation between habitat suitability and outbreak risk, as indicated by population density and historical events. For the source-sink population, 96.18% of Yangtze vole disaster regions were covered by a 10-km buffer zone of suitable habitat in 2007. Historical outbreak frequency and peak population density were significantly correlated with the proportion of land covered by suitable habitat (r = 0.68, P = 0.04 and r = 0.76, P = 0.03, respectively). The Yangtze vole population tends to migrate approximately 10 km in outbreak years. Here, we propose a practical method for habitat evaluation that can be used to create integrated pest management plans for rodent pests when combined with basic information on the biology, ecology and behavior of the target species. © 2014 International Society of Zoological Sciences, Institute of Zoology/Chinese Academy of Sciences and Wiley Publishing Asia Pty Ltd.

  2. Seasonal Habitat Patterns of Japanese Common Squid (Todarodes Pacificus Inferred from Satellite-Based Species Distribution Models

    Directory of Open Access Journals (Sweden)

    Irene D. Alabia

    2016-11-01

    Full Text Available The understanding of the spatio-temporal distributions of the species habitat in the marine environment is central to effectual resource management and conservation. Here, we examined the potential habitat distributions of Japanese common squid (Todarodes pacificus in the Sea of Japan during a four-year period. The seasonal patterns of preferential habitat were inferred from species distribution models, built using squid occurrences detected from night-time visible images and remotely-sensed environmental factors. The predicted squid habitat (i.e., areas with high habitat suitability revealed strong seasonal variability, characterized by a reduction of potential habitat, confined off of the southern part of the basin during the winter–spring period (December–May. Apparent expansion of preferential habitat occurred during summer–autumn months (June–November, concurrent with the formation of highly suitable habitat patches in certain regions of the Sea of Japan. These habitat distribution patterns were in response to changes in oceanographic conditions and synchronous with seasonal migration of squid. Moreover, the most important variables regulating the spatio-temporal patterns of suitable habitat were sea surface temperature, depth, sea surface height anomaly, and eddy kinetic energy. These variables could affect the habitat distributions through their impacts on growth and survival of squid, local nutrient transport, and the availability of favorable spawning and feeding grounds.

  3. Global patterns of fragmentation and connectivity of mammalian carnivore habitat

    OpenAIRE

    Crooks, Kevin R.; Burdett, Christopher L.; Theobald, David M.; Rondinini, Carlo; Boitani, Luigi

    2011-01-01

    Although mammalian carnivores are vulnerable to habitat fragmentation and require landscape connectivity, their global patterns of fragmentation and connectivity have not been examined. We use recently developed high-resolution habitat suitability models to conduct comparative analyses and to identify global hotspots of fragmentation and connectivity for the world's terrestrial carnivores. Species with less fragmentation (i.e. more interior high-quality habitat) had larger geographical ranges...

  4. Spatial differentiation of China's summer tourist destinations based on climatic suitability using the Universal Thermal Climate Index

    Science.gov (United States)

    Yang, Jun; Zhang, Zhenchao; Li, Xueming; Xi, Jianchao; Feng, Zhangxian

    2017-11-01

    As a result of global warming and the gradual exacerbation of the urban heat island effect, vacationing in the summer to escape the heat has become a compelling tourism demand. This study examines the spatial differentiation of China's summer tourist destinations based on meteorological observations and tourism resources data from 1960 to 2014. The Universal Thermal Climate Index and analytic hierarchy process model were used to analyze climatic suitability. The findings are as follows. First, the spatial distribution of China's summer tourism resources exhibits a double-peak characteristic, with concentrations in the mid- and high-latitude and high-altitude regions. Second, the most influential destinations in China based on the composite index were Guiyang, Qingdao, Harbin, and Dalian. These findings can helpful for people who are planning their summer vacations, as well as tourism managers who benefit from such increases in the number of tourists.

  5. Long-term habitat changes in a protected area: Implications for herpetofauna habitat management and restoration.

    Directory of Open Access Journals (Sweden)

    Chantel E Markle

    Full Text Available Point Pelee National Park, located at the southern-most tip of Canada's mainland, historically supported a large number of herpetofauna species; however, despite nearly a century of protection, six snake and five amphibian species have disappeared, and remaining species-at-risk populations are thought to be in decline. We hypothesized that long-term changes in availability and distribution of critical habitat types may have contributed to the disappearance of herpetofauna. To track habitat changes we used aerial image data spanning 85 years (1931-2015 and manually digitized and classified image data using a standardized framework. Change-detection analyses were used to evaluate the relative importance of proportionate loss and fragmentation of 17 habitat types. Marsh habitat diversity and aquatic connectivity has declined since 1931. The marsh matrix transitioned from a graminoid and forb shallow marsh interspersed with water to a cattail dominated marsh, altering critical breeding, foraging, and overwintering habitat. Reduced diversity of marsh habitats appears to be linked to the expansion of invasive Phragmites australis, which invaded prior to 2000. Loss of open habitats such as savanna and meadow has reduced availability of high quality thermoregulation habitat for reptiles. Restoration of the northwestern region and tip of Point Pelee National Park to a mixed landscape of shallow wetlands (cattail, graminoid, forb, open water and eradication of dense Phragmites stands should improve habitat diversity. Our results suggest that long-term landscape changes resulting from habitat succession and invasive species can negatively affect habitat suitability for herpetofauna and protection of land alone does not necessarily equate to protection of sensitive herpetofauna.

  6. Long-term habitat changes in a protected area: Implications for herpetofauna habitat management and restoration.

    Science.gov (United States)

    Markle, Chantel E; Chow-Fraser, Gillian; Chow-Fraser, Patricia

    2018-01-01

    Point Pelee National Park, located at the southern-most tip of Canada's mainland, historically supported a large number of herpetofauna species; however, despite nearly a century of protection, six snake and five amphibian species have disappeared, and remaining species-at-risk populations are thought to be in decline. We hypothesized that long-term changes in availability and distribution of critical habitat types may have contributed to the disappearance of herpetofauna. To track habitat changes we used aerial image data spanning 85 years (1931-2015) and manually digitized and classified image data using a standardized framework. Change-detection analyses were used to evaluate the relative importance of proportionate loss and fragmentation of 17 habitat types. Marsh habitat diversity and aquatic connectivity has declined since 1931. The marsh matrix transitioned from a graminoid and forb shallow marsh interspersed with water to a cattail dominated marsh, altering critical breeding, foraging, and overwintering habitat. Reduced diversity of marsh habitats appears to be linked to the expansion of invasive Phragmites australis, which invaded prior to 2000. Loss of open habitats such as savanna and meadow has reduced availability of high quality thermoregulation habitat for reptiles. Restoration of the northwestern region and tip of Point Pelee National Park to a mixed landscape of shallow wetlands (cattail, graminoid, forb, open water) and eradication of dense Phragmites stands should improve habitat diversity. Our results suggest that long-term landscape changes resulting from habitat succession and invasive species can negatively affect habitat suitability for herpetofauna and protection of land alone does not necessarily equate to protection of sensitive herpetofauna.

  7. Habitat Suitability Index Models: Forster's tern (breeding) - Gulf and Atlantic coasts

    Science.gov (United States)

    Martin, Richard P.; Zwank, Phillip J.

    1987-01-01

    The nesting range of Forster's terns hosts three allopatric breeding populations. The first and most important breeding area, in terms of the number of nes t i ng pairs, includes the western guIf coas t from the Louisiana-Mississippi border to northern Tamaulipas, Mexico (American Ornithologists' Union [AOUJ 1983). In addition, small numbers of Forster's terns have nested in Mobile County, Alabama (Imhof 1976). Although this species has not been recorded nesting in Mississippi (J. Jackson, Mississippi State University, Starkville; pers. comm.), it is observed in the coastal regions of that State every summer, and several thousand nest in adjacent Louisiana (Portnoy 1977; Clapp et ale 1983). The two largest colonies of Forster's terns documented in the literature were both in Louisiana: one of 2,750 pairs in Lake Borgne on the Louisiana-Mississippi border and one of 2,263 pairs in Calcasieu Lake (Portnoy 1977).

  8. River Discharge and Local Scale Habitat Influence LIFE Score Macroinvertebrate LIFE Scores

    DEFF Research Database (Denmark)

    Dunbar, Michael J.; Pedersen, Morten Lauge; Cadman, Dan

    2010-01-01

    Midlands of the U.K., we describe how local-scale habitat features (indexed through River Habitat Survey or Danish Habitat Quality Survey) and changing river flow (discharge) influence the response of a macroinvertebrate community index. The approach has broad applicability in developing regional flow...... Invertebrate index for Flow Evaluation (LIFE), an average of abundance-weighted flow groups which indicate the microhabitat preferences of each taxon for higher velocities and clean gravel/cobble substrata or slow/still velocities and finer substrata. 3. For the Danish fauna, the LIFE score responded to three...... of the channel (negative). In both cases, LIFE responded negatively to features associated with historical channel modification. We suggest that there are several mechanisms for these relationships, including the narrower tolerances of taxa preferring high velocity habitat; these taxa are also continually...

  9. Simulating Spawning and Juvenile Rainbow Trout (Oncorhynchus mykiss Habitat in Colorado River Based on High-Flow Effects

    Directory of Open Access Journals (Sweden)

    Weiwei Yao

    2017-02-01

    Full Text Available High flow generates significant alterations in downstream river reaches, resulting in physical condition changes in the downstream regions of the river such as water depth, flow velocity, water temperature and river bed. These alterations will lead to change in fish habitat configuration in the river. This paper proposes a model system to evaluate the high flow effects on river velocity, water depth, substrates changes, temperature distribution and consequently assess the change in spawning and juvenile rainbow trout (Oncorhynchus mykiss habitats in the downstream region of the Glen Canyon Dam. Firstly, based on the 2 dimensional (2D depth-averaged CFD (Computational Fluid Dynamics model and heat transfer equation applied for simulation, three indices were simulated, namely depth, flow velocity and temperature distribution. Then, the spawning and juvenile fish preference curves were obtained based on these three indices and substrates distribution. After that, the habitat model was proposed and used to simulate the high flow effects on juvenile and spawning rainbow trout habitat structure. Finally, the weighted usable area (WUA and overall suitability index (OSI of the spawning and juvenile fish species were quantitatively simulated to estimate the habitat sensitivity. The results illustrate that the high flow effect (HFE increased the juvenile rainbow trout habitat quality but decreased the spawning rainbow trout habitat quality. The juvenile trout were mainly affected by the water depth while the spawning rainbow trout were dominated by the bed elevation.

  10. Habitat split and the global decline of amphibians.

    Science.gov (United States)

    Becker, Carlos Guilherme; Fonseca, Carlos Roberto; Haddad, Célio Fernando Baptista; Batista, Rômulo Fernandes; Prado, Paulo Inácio

    2007-12-14

    The worldwide decline in amphibians has been attributed to several causes, especially habitat loss and disease. We identified a further factor, namely "habitat split"-defined as human-induced disconnection between habitats used by different life history stages of a species-which forces forest-associated amphibians with aquatic larvae to make risky breeding migrations between suitable aquatic and terrestrial habitats. In the Brazilian Atlantic Forest, we found that habitat split negatively affects the richness of species with aquatic larvae but not the richness of species with terrestrial development (the latter can complete their life cycle inside forest remnants). This mechanism helps to explain why species with aquatic larvae have the highest incidence of population decline. These findings reinforce the need for the conservation and restoration of riparian vegetation.

  11. Subterranean systems provide a suitable overwintering habitat for Salamandra salamandra

    Directory of Open Access Journals (Sweden)

    Monika Balogová

    2017-09-01

    Full Text Available The fire salamander (Salamandra salamandra has been repeatedly noted to occur in natural and artificial subterranean systems. Despite the obvious connection of this species with underground shelters, their level of dependence and importance to the species is still not fully understood. In this study, we carried out long-term monitoring based on the capture-mark-recapture method in two wintering populations aggregated in extensive underground habitats. Using the POPAN model we found the population size in a natural shelter to be more than twice that of an artificial underground shelter. Survival and recapture probabilities calculated using the Cormack-Jolly-Seber model were very constant over time, with higher survival values in males than in females and juveniles, though in terms of recapture probability, the opposite situation was recorded. In addition, survival probability obtained from Cormack-Jolly-Seber model was higher than survival from POPAN model. The observed bigger population size and the lower recapture rate in the natural cave was probably a reflection of habitat complexity. Our study showed that regular visits are needed to detect the true significance of underground shelters for fire salamanders. The presence of larvae was recorded in both wintering sites, especially in bodies of water near the entrance. On the basis of previous and our observations we incline to the view, that karst areas can induce not only laying in underground shelters but also group wintering in this species. Our study highlights the strong connection of the life cycle of fire salamanders with underground shelters and their essential importance for the persistence of some populations during unfavourable conditions and breeding activity. In addition, the study introduces the POPAN and Cormac-Jolly-Seber models for estimating of population size, survival and recapture probability in wintering populations of the species, which could provide important information

  12. High-resolution assessment of land use impacts on biodiversity in life cycle assessment using species habitat suitability models.

    Science.gov (United States)

    de Baan, Laura; Curran, Michael; Rondinini, Carlo; Visconti, Piero; Hellweg, Stefanie; Koellner, Thomas

    2015-02-17

    Agricultural land use is a main driver of global biodiversity loss. The assessment of land use impacts in decision-support tools such as life cycle assessment (LCA) requires spatially explicit models, but existing approaches are either not spatially differentiated or modeled at very coarse scales (e.g., biomes or ecoregions). In this paper, we develop a high-resolution (900 m) assessment method for land use impacts on biodiversity based on habitat suitability models (HSM) of mammal species. This method considers potential land use effects on individual species, and impacts are weighted by the species' conservation status and global rarity. We illustrate the method using a case study of crop production in East Africa, but the underlying HSMs developed by the Global Mammals Assessment are available globally. We calculate impacts of three major export crops and compare the results to two previously developed methods (focusing on local and regional impacts, respectively) to assess the relevance of the methodological innovations proposed in this paper. The results highlight hotspots of product-related biodiversity impacts that help characterize the links among agricultural production, consumption, and biodiversity loss.

  13. The importance of distance to resources in the spatial modelling of bat foraging habitat.

    Directory of Open Access Journals (Sweden)

    Ana Rainho

    Full Text Available Many bats are threatened by habitat loss, but opportunities to manage their habitats are now increasing. Success of management depends greatly on the capacity to determine where and how interventions should take place, so models predicting how animals use landscapes are important to plan them. Bats are quite distinctive in the way they use space for foraging because (i most are colonial central-place foragers and (ii exploit scattered and distant resources, although this increases flying costs. To evaluate how important distances to resources are in modelling foraging bat habitat suitability, we radio-tracked two cave-dwelling species of conservation concern (Rhinolophus mehelyi and Miniopterus schreibersii in a Mediterranean landscape. Habitat and distance variables were evaluated using logistic regression modelling. Distance variables greatly increased the performance of models, and distance to roost and to drinking water could alone explain 86 and 73% of the use of space by M. schreibersii and R. mehelyi, respectively. Land-cover and soil productivity also provided a significant contribution to the final models. Habitat suitability maps generated by models with and without distance variables differed substantially, confirming the shortcomings of maps generated without distance variables. Indeed, areas shown as highly suitable in maps generated without distance variables proved poorly suitable when distance variables were also considered. We concluded that distances to resources are determinant in the way bats forage across the landscape, and that using distance variables substantially improves the accuracy of suitability maps generated with spatially explicit models. Consequently, modelling with these variables is important to guide habitat management in bats and similarly mobile animals, particularly if they are central-place foragers or depend on spatially scarce resources.

  14. Hydrologic characteristics of freshwater mussel habitat: novel insights from modeled flows

    Science.gov (United States)

    Drew, C. Ashton; Eddy, Michele; Kwak, Thomas J.; Cope, W. Gregory; Augspurger, Tom

    2018-01-01

    The ability to model freshwater stream habitat and species distributions is limited by the spatially sparse flow data available from long-term gauging stations. Flow data beyond the immediate vicinity of gauging stations would enhance our ability to explore and characterize hydrologic habitat suitability. The southeastern USA supports high aquatic biodiversity, but threats, such as landuse alteration, climate change, conflicting water-resource demands, and pollution, have led to the imperilment and legal protection of many species. The ability to distinguish suitable from unsuitable habitat conditions, including hydrologic suitability, is a key criterion for successful conservation and restoration of aquatic species. We used the example of the critically endangered Tar River Spinymussel (Parvaspina steinstansana) and associated species to demonstrate the value of modeled flow data (WaterFALL™) to generate novel insights into population structure and testable hypotheses regarding hydrologic suitability. With ordination models, we: 1) identified all catchments with potentially suitable hydrology, 2) identified 2 distinct hydrologic environments occupied by the Tar River Spinymussel, and 3) estimated greater hydrological habitat niche breadth of assumed surrogate species associates at the catchment scale. Our findings provide the first demonstrated application of complete, continuous, regional modeled hydrologic data to freshwater mussel distribution and management. This research highlights the utility of modeling and data-mining methods to facilitate further exploration and application of such modeled environmental conditions to inform aquatic species management. We conclude that such an approach can support landscape-scale management decisions that require spatial information at fine resolution (e.g., enhanced National Hydrology Dataset catchments) and broad extent (e.g., multiple river basins).

  15. Predictive habitat modelling as a tool to assess the change in distribution and extent of an OSPAR priority habitat under an increased ocean temperature scenario: consequences for marine protected area networks and management.

    Science.gov (United States)

    Gormley, Kate S G; Porter, Joanne S; Bell, Michael C; Hull, Angela D; Sanderson, William G

    2013-01-01

    The aims of this study were to determine the extent and distribution of an OSPAR priority habitat under current baseline ocean temperatures; to illustrate the prospect for habitat loss under a changing ocean temperature scenario; and to demonstrate the potential application of predictive habitat mapping in "future-proofing" conservation and biodiversity management. Maxent modelling and GIS environmental envelope analysis of the biogenic bed forming species, Modiolus modiolus was carried out. The Maxent model was tested and validated using 75%/25% training/test occurrence records and validated against two sampling biases (the whole study area and a 20km buffer). The model was compared to the envelope analysis and the area under the receiver operating characteristic curve (Area Under the curve; AUC) was evaluated. The performance of the Maxent model was rated as 'good' to 'excellent' on all replicated runs and low variation in the runs was recorded from the AUC values. The extent of "most suitable", "less suitable" and "unsuitable" habitat was calculated for the baseline year (2009) and the projected increased ocean temperature scenarios (2030, 2050, 2080 and 2100). A loss of 100% of "most suitable" habitat was reported by 2080. Maintaining a suitable level of protection of marine habitats/species of conservation importance may require management of the decline and migration rather than maintenance of present extent. Methods applied in this study provide the initial application of a plausible "conservation management tool".

  16. Predictive habitat modelling as a tool to assess the change in distribution and extent of an OSPAR priority habitat under an increased ocean temperature scenario: consequences for marine protected area networks and management.

    Directory of Open Access Journals (Sweden)

    Kate S G Gormley

    Full Text Available The aims of this study were to determine the extent and distribution of an OSPAR priority habitat under current baseline ocean temperatures; to illustrate the prospect for habitat loss under a changing ocean temperature scenario; and to demonstrate the potential application of predictive habitat mapping in "future-proofing" conservation and biodiversity management. Maxent modelling and GIS environmental envelope analysis of the biogenic bed forming species, Modiolus modiolus was carried out. The Maxent model was tested and validated using 75%/25% training/test occurrence records and validated against two sampling biases (the whole study area and a 20km buffer. The model was compared to the envelope analysis and the area under the receiver operating characteristic curve (Area Under the curve; AUC was evaluated. The performance of the Maxent model was rated as 'good' to 'excellent' on all replicated runs and low variation in the runs was recorded from the AUC values. The extent of "most suitable", "less suitable" and "unsuitable" habitat was calculated for the baseline year (2009 and the projected increased ocean temperature scenarios (2030, 2050, 2080 and 2100. A loss of 100% of "most suitable" habitat was reported by 2080. Maintaining a suitable level of protection of marine habitats/species of conservation importance may require management of the decline and migration rather than maintenance of present extent. Methods applied in this study provide the initial application of a plausible "conservation management tool".

  17. Proceedings of a workshop on the development and evaluation of habitat suitability criteria: A compilation of papers and discussions presented at Colorado State University, Fort Collins, Colorado, December 8-12, 1986

    Science.gov (United States)

    Bovee, Ken; Zuboy, J.R.

    1988-01-01

    The development of reliable habitat suitability criteria is critical to the successful implementation of the Instream Flow Incremental Methodology (IFIM), or any other habitat based evaluation technology. It is also a fascinating topic of research, for several reasons. First, the “science” of habitat quantification is relatively young. Descriptions of habitat use and partitioning can be traced back to Darwin, if not further. Attempts to actually quantify habitat use can be found predominantly during the last two decades, with most of the activity occurring in about the last five years. Second, this work is challenging because we are usually working with fish or some other organism that lives out of sight in an environment that is foreign to humans. Most of the data collection techniques that have been developed for standard fisheries work are unsuited, without modification, for criteria development. These factors make anyone involved in this type of research a pioneer, of sorts. Pioneers often make new and wonderful discoveries, but they also sometimes get lost. In our opinion, however, there is an even more rewarding aspect to criteria development research. It seems that the field of biology has tended to become increasingly clinical over the years. Criteria development demands the unobtrusive observation of organisms in their natural environment, a fact that allows the biological to be a naturalist and still get paid for it. The relative youth and importance of habitat quantification have resulted in rapid advancements in the state of the art. The expansion of methods is vividly demonstrated simply by comparing the two Instream Flow Information Papers written on the subject in 1978 and in 1986. One of the missions of the Aquatic Systems Branch (formerly the Instream Flow Group) is to serve as a clearinghouse for new techniques and methods. In keeping with this role, a workshop was conducted during December 1986 to discuss current and newly evolving methods

  18. Effects of Changes in Lugu Lake Water Quality on Schizothorax Yunnansis Ecological Habitat Based on HABITAT Model

    Science.gov (United States)

    Huang, Wei; Mynnet, Arthur

    Schizothorax Yunnansis is an unique fish species only existing in Lugu Lake, which is located in the southwestern China. The simulation and research on Schizothorax Yunnansis habitat environment have a vital significance to protect this rare fish. With the development of the tourism industry, there bring more pressure on the environmental protection. The living environment of Schizothorax Yunnansis is destroyed seriously because the water quality is suffering the sustaining pollution of domestic sewage from the peripheral villages. This paper analyzes the relationship between water quality change and Schizothorax Yunnansis ecological habitat and evalutes Schizothorax Yunnansis's ecological habitat impact based on HABITAT model. The results show that when the TP concentration in Lugu Lake does not exceed Schizothorax Yunnansis's survival threshold, Schizothorax Yunnansis can get more nutrients and the suitable habitat area for itself is increased. Conversely, it can lead to TP toxicity in the Schizothorax Yunnansis and even death. Therefore, unsuitable habitat area for Schizothorax Yunnansis is increased. It can be seen from the results that HABITAT model can assist in ecological impact assessment studies by translating results of hydrological, water quality models into effects on the natural environment and human society.

  19. Linking hydrologic, physical and chemical habitat environments for the potential assessment of fish community rehabilitation in a developing city

    Science.gov (United States)

    Zhao, C. S.; Yang, S. T.; Liu, C. M.; Dou, T. W.; Yang, Z. L.; Yang, Z. Y.; Liu, X. L.; Xiang, H.; Nie, S. Y.; Zhang, J. L.; Mitrovic, S. M.; Yu, Q.; Lim, R. P.

    2015-04-01

    Aquatic ecological rehabilitation is increasingly attracting considerable public and research attention. An effective method that requires less data and expertise would help in the assessment of rehabilitation potential and in the monitoring of rehabilitation activities as complicated theories and excessive data requirements on assemblage information make many current assessment models expensive and limit their wide use. This paper presents an assessment model for restoration potential which successfully links hydrologic, physical and chemical habitat factors to fish assemblage attributes drawn from monitoring datasets on hydrology, water quality and fish assemblages at a total of 144 sites, where 5084 fish were sampled and tested. In this model three newly developed sub-models, integrated habitat index (IHSI), integrated ecological niche breadth (INB) and integrated ecological niche overlap (INO), are established to study spatial heterogeneity of the restoration potential of fish assemblages based on gradient methods of habitat suitability index and ecological niche models. To reduce uncertainties in the model, as many fish species as possible, including important native fish, were selected as dominant species with monitoring occurring over several seasons to comprehensively select key habitat factors. Furthermore, a detrended correspondence analysis (DCA) was employed prior to a canonical correspondence analysis (CCA) of the data to avoid the "arc effect" in the selection of key habitat factors. Application of the model to data collected at Jinan City, China proved effective reveals that three lower potential regions that should be targeted in future aquatic ecosystem rehabilitation programs. They were well validated by the distribution of two habitat parameters: river width and transparency. River width positively influenced and transparency negatively influenced fish assemblages. The model can be applied for monitoring the effects of fish assemblage restoration

  20. Fall and winter microhabitat use and suitability for spring chinook salmon parr in a U.S. Pacific Northwest River

    Science.gov (United States)

    Favrot, Scott D.; Jonasson, Brian C.; Peterson, James T.

    2018-01-01

    Habitat degradation has been implicated as a primary threat to Pacific salmon Oncorhynchus spp. Habitat restoration and conservation are key toward stemming population declines; however, winter microhabitat use and suitability knowledge are lacking for small juvenile salmonids. Our objective was to characterize microhabitat use and suitability for spring Chinook Salmon Oncorhynchus tshawytscha parr during fall and winter. Using radiotelemetry techniques during October–February (2009–2011), we identified fall and winter microhabitat use by spring Chinook Salmon parr in Catherine Creek, northeastern Oregon. Tagged fish occupied two distinct gradient reaches (moderate and low). Using a mixed‐effects logistic regression resource selection function (RSF) model, we found evidence that microhabitat use was similar between free‐flowing and surface ice conditions. However, habitat use shifted between seasons; most notably, there was greater use of silt substrate and areas farther from the bank during winter. Between gradients, microhabitat use differed with greater use of large wood (LW) and submerged aquatic vegetation in the low‐gradient reach. Using a Bayesian RSF approach, we developed gradient‐specific habitat suitability criteria. Throughout the study area, deep depths and slow currents were most suitable, with the exception of the low‐gradient reach where moderate depths were optimal. Near‐cover coarse and fine substrates were most suitable in the moderate‐ and low‐gradient reaches, respectively. Near‐bank LW was most suitable throughout the study area. Multivariate principal component analyses (PCA) indicated co‐occurring deep depths supporting slow currents near cover were intensively occupied in the moderate‐gradient reach. In the low‐gradient reach, PCA indicated co‐occurring moderate depths, slow currents, and near‐bank cover were most frequently occupied. Our study identified suitable and interrelated microhabitat

  1. [Ecology suitability study of Ephedra intermedia].

    Science.gov (United States)

    Ma, Xiao-Hui; Lu, You-Yuan; Huang, De-Dong; Zhu, Tian-Tian; Lv, Pei-Lin; Jin, Ling

    2017-06-01

    The study aims at predicting ecological suitability of Ephedra intermedia in China by using maximum entropy Maxent model combined with GIS, and finding the main ecological factors affecting the distribution of E. intermedia suitability in appropriate growth area. Thirty-eight collected samples of E. intermedia and E. intermedia and 116 distribution information from CVH information using ArcGIS technology were analyzed. MaxEnt model was applied to forecast the E. intermedia in our country's ecology. E. intermedia MaxEnt ROC curve model training data and testing data sets the AUC value was 0.986 and 0.958, respectively, which were greater than 0.9, tending to be 1.The calculated E. intermedia habitat suitability by the model showed a high accuracy and credibility, which indicated that MaxEnt model could well predict the potential distribution area of E. intermedia in China. Copyright© by the Chinese Pharmaceutical Association.

  2. Habitat suitability—density relationship in an endangered woodland species: the case of the Blue Chaffinch (Fringilla polatzeki

    Directory of Open Access Journals (Sweden)

    Luis M. Carrascal

    2017-09-01

    Full Text Available Background Understanding constraints to the distribution of threatened species may help to ascertain whether there are other suitable sectors for reducing the risks associated with species that are recorded in only one protected locality, and to inform about the suitability of other areas for reintroduction or translocation programs. Methods We studied the Gran Canaria blue chaffinch (Fringilla polatzeki, a habitat specialist endemic of the Canary Islands restricted to the pine forest of Inagua, the only area where the species has been naturally present as a regular breeder in the last 25 years. A suitability distribution model using occurrences with demographic relevance (i.e., nest locations of successful breeding attempts analysed using boosted classification trees was built considering orographic, climatic and habitat structure predictors. By means of a standardized survey program we monitored the yearly abundance of the species in 100 sectors since the declaration of Inagua as a Strict Nature Reserve in 1994. Results The variables with the highest relative importance in blue chaffinch habitat preferences were pine height, tree cover, altitude, and rainfall during the driest trimester (July–September. The observed local abundance of the blue chaffinch in Inagua (survey data was significantly correlated with habitat suitability derived from modelling the location of successful nesting attempts (using linear and quantile regressions. The outcomes of the habitat suitability model were used to quantify the suitability of other natural, historic, pine forests of Gran Canaria. Tamadaba is the forest with most suitable woodland patches for the species. We estimated a population size of 195–430 blue chaffinches in Inagua since 2011 (95% CI, the smallest population size of a woodland passerine in the Western Palearctic. Discussion Habitat suitability obtained from modelling the location of successful breeding attempts is a good surrogate of the

  3. Comprehensive environment-suitability evaluation model about Carya cathayensis

    International Nuclear Information System (INIS)

    Da-Sheng, W.; Li-Juan, L.; Qin-Fen, Y.

    2013-01-01

    On the relation between the suitable environment and the distribution areas of Carya cathayensis Sarg., the current studies are mainly committed to qualitative descriptions, but did not consider quantitative models. The objective of this study was to establish a environment-suitability evaluation model which used to predict potential suitable areas of C. cathayensis. Firstly, the 3 factor data of soil type, soil parent material and soil thickness were obtained based on 2-class forest resource survey, and other factor data, which included elevation, slope, aspect, surface curvature, humidity index, and solar radiation index, were extracted from DEM (Digital Elevation Model). Additionally, the key affecting factors were defined by PCA (Principal Component Analysis), the weights of evaluation factors were determined by AHP (Analysis Hierarchy Process) and the quantitative classification of single factor was determined by membership function with fuzzy mathematics. Finally, a comprehensive environment-suitability evaluation model was established and which was also used to predict the potential suitable areas of C. cathayensis in Daoshi Town in the study region. The results showed that 85.6% of actual distribution areas were in the most suitable and more suitable regions and 11.5% in the general suitable regions

  4. Habitat persistence for sedentary organisms in managed rivers: the case for the federally endangered dwarf wedgemussel (Alasmidonta heterodon) in the Delaware River

    Science.gov (United States)

    Maloney, Kelly O.; Lellis, William A.; Bennett, Randy M.; Waddle, Terry J.

    2012-01-01

    1. To manage the environmental flow requirements of sedentary taxa, such as mussels and aquatic insects with fixed retreats, we need a measure of habitat availability over a variety of flows (i.e. a measure of persistent habitat). Habitat suitability measures in current environmental flow assessments are measured on a ‘flow by flow’ basis and thus are not appropriate for these taxa. Here, we present a novel measure of persistent habitat suitability for the dwarf wedgemussel (Alasmidonta heterodon), listed as federally endangered in the U.S.A., in three reaches of the Delaware River. 2. We used a two-dimensional hydrodynamic model to quantify suitable habitat over a range of flows based on modelled depth, velocity, Froude number, shear velocity and shear stress at three scales (individual mussel, mussel bed and reach). Baseline potentially persistent habitat was quantified as the sum of pixels that met all thresholds identified for these variables for flows ≥40 m3 s−1, and we calculated the loss of persistently suitable habitat by sequentially summing suitable habitat estimates at lower flows. We estimated the proportion of mussel beds exposed at each flow and the amount of change in the size of the mussel bed for one reach. 3. For two reaches, mussel beds occupied areas with lower velocity, shear velocity, shear stress and Froude number than the reach average at all flows. In the third reach, this was true only at higher flows. Together, these results indicate that beds were possible refuge areas from the effects of these hydrological parameters. Two reaches showed an increase in the amount of exposed mussel beds with decreasing flow. 4. Baseline potentially persistent habitat was less than half the areal extent of potentially suitable habitat, and it decreased with decreasing flow. Actually identified beds and modelled persistent habitat showed good spatial overlap, but identified beds occupied only a portion of the total modelled persistent

  5. Fish habitat mitigation measures for hydrotechnical projects

    International Nuclear Information System (INIS)

    McPhail, G.D.; MacMillan, D.B.; Katopodis, C.

    1992-01-01

    In recent years, the identification and mitigation of environmental impacts of hydrotechnical projects, particularly on fish and fish habitats, have become a major component of project planning and design. Potential impacts to fish and fish habitat may include increased fish mortality, decreased species diversity, and loss or decreases in fish production due to loss of habitat or alteration of its suitability. These impacts arise from flooding of riverine habitat, alteration of flow quantity and distribution, changes in morphology, and alteration of water quality, including suspended sediments, temperature, dissolved oxygen, and mercury. The results of a study for the Canadian Federal Department of Fisheries and Oceans Central and Arctic Region, examining fish habitat mitigation techniques for their applicability to hydrotechnical projects in Canada are summarized. The requirements for achievement and verification of the no net loss policy for a project are discussed. 10 refs., 2 tabs

  6. Defining geo-habitats for groundwater ecosystem assessments: an example from England and Wales (UK)

    Science.gov (United States)

    Weitowitz, Damiano C.; Maurice, Louise; Lewis, Melinda; Bloomfield, John P.; Reiss, Julia; Robertson, Anne L.

    2017-12-01

    Groundwater ecosystems comprising micro-organisms and metazoans provide an important contribution to global biodiversity. Their complexity depends on geology, which determines the physical habitat available, and the chemical conditions within it. Despite this, methods of classifying groundwater habitats using geological data are not well established and researchers have called for higher resolution habitat frameworks. A novel habitat typology for England and Wales (UK) is proposed, which distinguishes 11 geological habitats (geo-habitats) on hydrogeological principles and maps their distribution. Hydrogeological and hydrochemical data are used to determine the characteristics of each geo-habitat, and demonstrate their differences. Using these abiotic parameters, a new method to determine abiotic habitat quality is then developed. The geo-habitats had significantly different characteristics, validating the classification system. All geo-habitats were highly heterogeneous, containing both high quality habitat patches that are likely to be suitable for fauna, and areas of low quality that may limit faunal distributions. Karstic and porous habitats generally were higher quality than fractured habitats. Overall, 70% of England and Wales are covered by lower quality fractured habitats, with only 13% covered by higher quality habitats. The main areas of high quality habitats occur in central England as north-south trending belts, possibly facilitating dispersal along this axis. They are separated by low quality geo-habitats that may prevent east-west dispersal of fauna. In south-west England and Wales suitable geo-habitats occur as small isolated patches. Overall, this paper provides a new national-scale typology that is adaptable for studies in other geographic areas.

  7. Evaluation of Life History Diversity, Habitat Connectivity, and Survival Benefits Associated with Habitat Restoration Actions in the Lower Columbia River and Estuary, Annual Report 2010

    Energy Technology Data Exchange (ETDEWEB)

    Diefenderfer, Heida L.; Johnson, Gary E.; Sather, Nichole K.; Skalski, J. R.; Dawley, Earl M.; Coleman, Andre M.; Ostrand, Kenneth G.; Hanson, Kyle C.; Woodruff, Dana L.; Donley, Erin E.; Ke, Yinghai; Buenau, Kate E.; Bryson, Amanda J.; Townsend, Richard L.

    2011-10-01

    This report describes the 2010 research conducted under the U.S. Army Corps of Engineers (USACE) project EST-P-09-1, titled Evaluation of Life History Diversity, Habitat Connectivity, and Survival Benefits Associated with Habitat Restoration Actions in the Lower Columbia River and Estuary, and known as the 'Salmon Benefits' study. The primary goal of the study is to establish scientific methods to quantify habitat restoration benefits to listed salmon and trout in the lower Columbia River and estuary (LCRE) in three required areas: habitat connectivity, early life history diversity, and survival (Figure ES.1). The general study approach was to first evaluate the state of the science regarding the ability to quantify benefits to listed salmon and trout from habitat restoration actions in the LCRE in the 2009 project year, and then, if feasible, in subsequent project years to develop quantitative indices of habitat connectivity, early life history diversity, and survival. Based on the 2009 literature review, the following definitions are used in this study. Habitat connectivity is defined as a landscape descriptor concerning the ability of organisms to move among habitat patches, including the spatial arrangement of habitats (structural connectivity) and how the perception and behavior of salmon affect the potential for movement among habitats (functional connectivity). Life history is defined as the combination of traits exhibited by an organism throughout its life cycle, and for the purposes of this investigation, a life history strategy refers to the body size and temporal patterns of estuarine usage exhibited by migrating juvenile salmon. Survival is defined as the probability of fish remaining alive over a defined amount of space and/or time. The objectives of the 4-year study are as follows: (1) develop and test a quantitative index of juvenile salmon habitat connectivity in the LCRE incorporating structural, functional, and hydrologic components; (2

  8. Effects of Climate Change on Habitat Availability and Configuration for an Endemic Coastal Alpine Bird.

    Directory of Open Access Journals (Sweden)

    Michelle M Jackson

    Full Text Available North America's coastal mountains are particularly vulnerable to climate change, yet harbour a number of endemic species. With little room "at the top" to track shifting climate envelopes, alpine species may be especially negatively affected by climate-induced habitat fragmentation. We ask how climate change will affect the total amount, mean patch size, and number of patches of suitable habitat for Vancouver Island White-tailed Ptarmigan (Lagopus leucura saxatilis; VIWTP, a threatened, endemic alpine bird. Using a Random Forest model and a unique dataset consisting of citizen science observations combined with field surveys, we predict the distribution and configuration of potential suitable summer habitat for VIWTP under baseline and future (2020s, 2050s, and 2080s climates using three general circulation models and two greenhouse gas scenarios. VIWTP summer habitat is predicted to decline by an average of 25%, 44%, and 56% by the 2020s, 2050s, and 2080s, respectively, under the low greenhouse gas scenario and 27%, 59%, and 74% under the high scenario. Habitat patches are predicted to become fragmented, with a 52-79% reduction in mean patch size. The average elevation of suitable habitat patches is expected to increase, reflecting a loss of patches at lower elevations. Thus ptarmigan are in danger of being "squeezed off the mountain", as their remaining suitable habitat will be increasingly confined to mountaintops in the center of the island. The extent to which ptarmigan will be able to persist in increasingly fragmented habitat is unclear. Much will depend on their ability to move throughout a more heterogeneous landscape, utilize smaller breeding areas, and survive increasingly variable climate extremes. Our results emphasize the importance of continued monitoring and protection for high elevation specialist species, and suggest that White-tailed Ptarmigan should be considered an indicator species for alpine ecosystems in the face of

  9. Development of computational fluid dynamics--habitat suitability (CFD-HSI) models to identify potential passage--Challenge zones for migratory fishes in the Penobscot River

    Science.gov (United States)

    Haro, Alexander J.; Dudley, Robert W.; Chelminski, Michael

    2012-01-01

    A two-dimensional computational fluid dynamics-habitat suitability (CFD–HSI) model was developed to identify potential zones of shallow depth and high water velocity that may present passage challenges for five anadromous fish species in the Penobscot River, Maine, upstream from two existing dams and as a result of the proposed future removal of the dams. Potential depth-challenge zones were predicted for larger species at the lowest flow modeled in the dam-removal scenario. Increasing flows under both scenarios increased the number and size of potential velocity-challenge zones, especially for smaller species. This application of the two-dimensional CFD–HSI model demonstrated its capabilities to estimate the potential effects of flow and hydraulic alteration on the passage of migratory fish.

  10. A habitat overlap analysis derived from maxent for tamarisk and the south-western willow flycatcher

    Science.gov (United States)

    York, Patricia; Evangelista, Paul; Kumar, Sunil; Graham, James; Flather, Curtis; Stohlgren, Thomas

    2011-06-01

    Biologic control of the introduced and invasive, woody plant tamarisk ( Tamarix spp, saltcedar) in south-western states is controversial because it affects habitat of the federally endangered South-western Willow Flycatcher ( Empidonax traillii extimus). These songbirds sometimes nest in tamarisk where floodplain-level invasion replaces native habitats. Biologic control, with the saltcedar leaf beetle ( Diorhabda elongate), began along the Virgin River, Utah, in 2006, enhancing the need for comprehensive understanding of the tamarisk-flycatcher relationship. We used maximum entropy (Maxent) modeling to separately quantify the current extent of dense tamarisk habitat (>50% cover) and the potential extent of habitat available for E. traillii extimus within the studied watersheds. We used transformations of 2008 Landsat Thematic Mapper images and a digital elevation model as environmental input variables. Maxent models performed well for the flycatcher and tamarisk with Area Under the ROC Curve (AUC) values of 0.960 and 0.982, respectively. Classification of thresholds and comparison of the two Maxent outputs indicated moderate spatial overlap between predicted suitable habitat for E. traillii extimus and predicted locations with dense tamarisk stands, where flycatcher habitat will potentially change flycatcher habitats. Dense tamarisk habitat comprised 500 km2 within the study area, of which 11.4% was also modeled as potential habitat for E. traillii extimus. Potential habitat modeled for the flycatcher constituted 190 km2, of which 30.7% also contained dense tamarisk habitat. Results showed that both native vegetation and dense tamarisk habitats exist in the study area and that most tamarisk infestations do not contain characteristics that satisfy the habitat requirements of E. traillii extimus. Based on this study, effective biologic control of Tamarix spp. may, in the short term, reduce suitable habitat available to E. traillii extimus, but also has the potential

  11. Structural habitat predicts functional dispersal habitat of a large carnivore: how leopards change spots.

    Science.gov (United States)

    Fattebert, Julien; Robinson, Hugh S; Balme, Guy; Slotow, Rob; Hunter, Luke

    2015-10-01

    Natal dispersal promotes inter-population linkage, and is key to spatial distribution of populations. Degradation of suitable landscape structures beyond the specific threshold of an individual's ability to disperse can therefore lead to disruption of functional landscape connectivity and impact metapopulation function. Because it ignores behavioral responses of individuals, structural connectivity is easier to assess than functional connectivity and is often used as a surrogate for landscape connectivity modeling. However using structural resource selection models as surrogate for modeling functional connectivity through dispersal could be erroneous. We tested how well a second-order resource selection function (RSF) models (structural connectivity), based on GPS telemetry data from resident adult leopard (Panthera pardus L.), could predict subadult habitat use during dispersal (functional connectivity). We created eight non-exclusive subsets of the subadult data based on differing definitions of dispersal to assess the predictive ability of our adult-based RSF model extrapolated over a broader landscape. Dispersing leopards used habitats in accordance with adult selection patterns, regardless of the definition of dispersal considered. We demonstrate that, for a wide-ranging apex carnivore, functional connectivity through natal dispersal corresponds to structural connectivity as modeled by a second-order RSF. Mapping of the adult-based habitat classes provides direct visualization of the potential linkages between populations, without the need to model paths between a priori starting and destination points. The use of such landscape scale RSFs may provide insight into predicting suitable dispersal habitat peninsulas in human-dominated landscapes where mitigation of human-wildlife conflict should be focused. We recommend the use of second-order RSFs for landscape conservation planning and propose a similar approach to the conservation of other wide-ranging large

  12. Projected future suitable habitat and productivity of Douglas-fir in western North America

    Science.gov (United States)

    Aaron R. Weiskittel; Nicholas L. Crookston; Gerald E. Rehfeldt

    2012-01-01

    Douglas-fir (Pseudotsuga menziesii [Mirb.] Franco) is one of the most common and commercially important species in western North America. The species can occupy a range of habitats, is long-lived (up to 500 years), and highly productive. However, the future of Douglas-fir in western North America is highly uncertain due to the expected changes in climate conditions....

  13. Habitat assessment of non-wadeable rivers in Michigan.

    Science.gov (United States)

    Wilhelm, Jennifer G O; Allan, J David; Wessell, Kelly J; Merritt, Richard W; Cummins, Kenneth W

    2005-10-01

    Habitat evaluation of wadeable streams based on accepted protocols provides a rapid and widely used adjunct to biological assessment. However, little effort has been devoted to habitat evaluation in non-wadeable rivers, where it is likely that protocols will differ and field logistics will be more challenging. We developed and tested a non-wadeable habitat index (NWHI) for rivers of Michigan, where non-wadeable rivers were defined as those of order >or=5, drainage area >or=1600 km2, mainstem lengths >or=100 km, and mean annual discharge >or=15 m3/s. This identified 22 candidate rivers that ranged in length from 103 to 825 km and in drainage area from 1620 to 16,860 km2. We measured 171 individual habitat variables over 2-km reaches at 35 locations on 14 rivers during 2000-2002, where mean wetted width was found to range from 32 to 185 m and mean thalweg depth from 0.8 to 8.3 m. We used correlation and principal components analysis to reduce the number of variables, and examined the spatial pattern of retained variables to exclude any that appeared to reflect spatial location rather than reach condition, resulting in 12 variables to be considered in the habitat index. The proposed NWHI included seven variables: riparian width, large woody debris, aquatic vegetation, bottom deposition, bank stability, thalweg substrate, and off-channel habitat. These variables were included because of their statistical association with independently derived measures of human disturbance in the riparian zone and the catchment, and because they are considered important in other habitat protocols or to the ecology of large rivers. Five variables were excluded because they were primarily related to river size rather than anthropogenic disturbance. This index correlated strongly with indices of disturbance based on the riparian (adjusted R2 = 0.62) and the catchment (adjusted R2 = 0.50), and distinguished the 35 river reaches into the categories of poor (2), fair (19), good (13), and

  14. Predictive Modeling of Spinner Dolphin (Stenella longirostris) Resting Habitat in the Main Hawaiian Islands

    Science.gov (United States)

    Thorne, Lesley H.; Johnston, David W.; Urban, Dean L.; Tyne, Julian; Bejder, Lars; Baird, Robin W.; Yin, Suzanne; Rickards, Susan H.; Deakos, Mark H.; Mobley, Joseph R.; Pack, Adam A.; Chapla Hill, Marie

    2012-01-01

    Predictive habitat models can provide critical information that is necessary in many conservation applications. Using Maximum Entropy modeling, we characterized habitat relationships and generated spatial predictions of spinner dolphin (Stenella longirostris) resting habitat in the main Hawaiian Islands. Spinner dolphins in Hawai'i exhibit predictable daily movements, using inshore bays as resting habitat during daylight hours and foraging in offshore waters at night. There are growing concerns regarding the effects of human activities on spinner dolphins resting in coastal areas. However, the environmental factors that define suitable resting habitat remain unclear and must be assessed and quantified in order to properly address interactions between humans and spinner dolphins. We used a series of dolphin sightings from recent surveys in the main Hawaiian Islands and a suite of environmental variables hypothesized as being important to resting habitat to model spinner dolphin resting habitat. The model performed well in predicting resting habitat and indicated that proximity to deep water foraging areas, depth, the proportion of bays with shallow depths, and rugosity were important predictors of spinner dolphin habitat. Predicted locations of suitable spinner dolphin resting habitat provided in this study indicate areas where future survey efforts should be focused and highlight potential areas of conflict with human activities. This study provides an example of a presence-only habitat model used to inform the management of a species for which patterns of habitat availability are poorly understood. PMID:22937022

  15. Production of fiberglass/metal composite material suitable for building habitat and manufacturing facilities

    Science.gov (United States)

    1987-01-01

    The production of a fiberglass/metal composite material suitable for building habitats and manufacturing facilities was the project for Clemson. The concept and development of the knowledge necessary to produce glass fibers originated in the spring semester. During the summer, while at Johnson Space Center, fiberglass from a rock composition similar to ones found at the Apollo 16 site on the moon was successfully produced. The project this year was a continuation of last year's studies. We addressed the following problems which emerged as the work progressed: (1) Methods for coating the fibers with a metal were explored. We manufactured composites in two stages: Glass fibers without any coating on them; and fibers coated with metals as they were made. This proved to be a difficult process. Future activities include using a chemical vapor deposition process on fibers which have been made. (2) A glass furnace was developed which relies primarily on solar energy for melting the glass. The temperature of the melted glass is maintained by electrical means. The design is for 250 kg of glass per day. An electrical engineering student developed a scheme for controlling the melting and manufacturing process from the earth. This was done to minimize the human risk. Graphite refractories are relied on to contain the melt. (3) The glass composition chosen for the project is a relatively pure anorthite which is available in the highland regions of the lunar surface. A major problems with this material is that it melts at a comparatively high temperature. This problem will be solved by using graphite refractory materials for the furnace. The advantage of this glass composition is that it is very stable and does not tend to crystallize. (4) We have also refined the experimental furnace and fiber making machinery which we will be using at Johnson Space Center this summer. We believe that we will be able to draw and coat glass fibers in a vacuum for use in composites. We intend to

  16. Modelling climate change impacts on stream habitat conditions

    DEFF Research Database (Denmark)

    Boegh, Eva; Conallin, John; Karthikeyan, Matheswaran

    Impact from groundwater abstraction on freshwater resources and ecosystems is an issue of sincere concern in Denmark and many other countries worldwide. In addition, climate change projections add complexity to the existing conflict between water demands to satisfy human needs and water demands...... required to conserve streams as biologically diverse and healthy ecosystems. Solutions to this intensifying conflict require a holistic approach whereby stream biota is related to their physical environment at catchment scale, as also demanded by the EU Water Framework Directive. In the present study......, climate impacts on stream ecological conditions were quantified by combining a heat and mass stream flow with a habitat suitability modelling approach. Habitat suitability indices were developed for stream velocity, water depth, water temperature and substrate. Generally, water depth was found...

  17. Rainwater Wildlife Area Habitat Evaluation Procedures Report; A Columbia Basin Wildlife Mitigation Project.

    Energy Technology Data Exchange (ETDEWEB)

    Childs, Allen B.

    2004-01-01

    The 8,768 acre Rainwater Wildlife Area was acquired in September 1998 by the Confederated Tribes of the Umatilla Indian Reservation (CTUIR) through an agreement with Bonneville Power Administration (BPA) to partially offset habitat losses associated with construction of the John Day and McNary hydroelectric facilities on the mainstem Columbia River. U.S. Fish and Wildlife Service (USFWS) Habitat Evaluation Procedures (HEP) were used to determine the number of habitat units credited to BPA for acquired lands. Upland and riparian forest, upland and riparian shrub, and grassland cover types are evaluated in this study. Targeted wildlife species include downy woodpecker (Picoides pubescens), black-capped chickadee (Parus atricopillus), blue grouse (Dendragapus obscurus), great blue heron (Ardea herodias), yellow warbler (Dendroica petechia), mink (Mustela vison), and Western meadowlark (Sturnella neglecta). Habitat surveys were conducted in 1998 and 1999 in accordance with published HEP protocols and included 65,300, 594m{sup 2}2 plots, and 112 one-tenth-acre plots. Between 153.3 and 7,187.46 acres were evaluated for each target wildlife mitigation species. Derived habitat suitability indices were multiplied by corresponding cover-type acreages to determine the number of habitat units for each species. The total baseline habitat units credited to BPA for the Rainwater Wildlife Area and its seven target species is 5,185.3 habitat units. Factors limiting habitat suitability are related to the direct, indirect, and cumulative effects of past livestock grazing, road construction, and timber harvest which have simplified the structure, composition, and diversity of native plant communities. Alternatives for protecting and improving habitat suitability include exclusion of livestock grazing, road de-commissioning/obliteration, reforestation and thinning, control of competing and unwanted vegetation (including noxious weeds), reestablishing displaced or reduced native

  18. Remote sensing-based landscape indicators for the evaluation of threatened-bird habitats in a tropical forest.

    Science.gov (United States)

    Singh, Minerva; Tokola, Timo; Hou, Zhengyang; Notarnicola, Claudia

    2017-07-01

    Avian species persistence in a forest patch is strongly related to the degree of isolation and size of a forest patch and the vegetation structure within a patch and its matrix are important predictors of bird habitat suitability. A combination of space-borne optical (Landsat), ALOS-PALSAR (radar), and airborne Light Detection and Ranging (LiDAR) data was used for assessing variation in forest structure across forest patches that had undergone different levels of forest degradation in a logged forest-agricultural landscape in Southern Laos. The efficacy of different remote sensing (RS) data sources in distinguishing forest patches that had different seizes, configurations, and vegetation structure was examined. These data were found to be sensitive to the varying levels of degradation of the different patch categories. Additionally, the role of local scale forest structure variables (characterized using the different RS data and patch area) and landscape variables (characterized by distance from different forest patches) in influencing habitat preferences of International Union for Conservation of Nature (IUCN) Red listed birds found in the study area was examined. A machine learning algorithm, MaxEnt, was used in conjunction with these data and field collected geographical locations of the avian species to identify the factors influencing habitat preference of the different bird species and their suitable habitats. Results show that distance from different forest patches played a more important role in influencing habitat suitability for the different avian species than local scale factors related to vegetation structure and health. In addition to distance from forest patches, LiDAR-derived forest structure and Landsat-derived spectral variables were important determinants of avian habitat preference. The models derived using MaxEnt were used to create an overall habitat suitability map (HSM) which mapped the most suitable habitat patches for sustaining all the

  19. Delta smelt habitat in the San Francisco Estuary: A reply to Manly, Fullerton, Hendrix, and Burnham’s “Comments on Feyrer et al. Modeling the effects of future outflow on the abiotic habitat of an imperiled estuarine fish"

    Science.gov (United States)

    Feyrer, Frederick V.; Newman, Ken B.; Nobriga, Matthew; Sommer, Ted

    2016-01-01

    Manly et al. (2015) commented on the approach we (Feyrer et al. 2011) used to calculate an index of the abiotic habitat of delta smelt Hypomesus transpacificus. The delta smelt is an annual fish species endemic to the San Francisco Estuary (SFE) in California, USA. Conserving the delta smelt population while providing reliability to California’s water supply with water diverted from the SFE ecosystem is a major management and policy issue. Feyrer et al. (2011) evaluated historic and projected future abiotic habitat conditions for delta smelt. Manly et al. (2015) specifically commented regarding the following: (1) use of an independent abundance estimate, (2) spatial bias in the habitat index, and (3) application of the habitat index to future climate change projections. Here, we provide our reply to these three topics. While we agree that some of the concepts raised by Manly et al. (2015) have the potential to improve habitat assessments and their application to climate change scenarios as knowledge is gained, we note that the Feyrer et al. (2011) delta smelt habitat index is essentially identical to one reconstructed using Manly et al.’s (2015) preferred approach (their model 8), as shown here in Fig. 1.

  20. Hydro-power production and fish habitat suitability: Assessing impact and effectiveness of ecological flows at regional scale

    Science.gov (United States)

    Ceola, Serena; Pugliese, Alessio; Ventura, Matteo; Galeati, Giorgio; Montanari, Alberto; Castellarin, Attilio

    2018-06-01

    Anthropogenic activities along streams and rivers may be of major concern for fluvial ecosystems, e.g. abstraction and impoundment of surface water resources may profoundly alter natural streamflow regimes. An established approach aimed at preserving the behavior and distribution of fluvial species relies on the definition of ecological flows (e-flows) downstream of dams and diversion structures. E-flow prescriptions are usually set by basin authorities at regional scale, often without a proper assessment of their impact and effectiveness. On the contrary, we argue that e-flows should be identified on the basis of (i) regional and (ii) quantitative assessments. We focus on central Italy and evaluate the effects on habitat suitability of two near-threatened fish species (i.e. Barbel and Chub) and an existing hydro-power network when shifting from the current time-invariant e-flow policy to a tighter and seasonally-varying soon-to-be-enforced one. Our example clearly shows that: (a) quantitative regional scale assessments are viable even when streamflow observations are entirely missing at study sites; (b) aprioristic e-flows policies may impose releases that exceed natural streamflows for significantly long time intervals (weeks, or months); (c) unduly tightening e-flow policies may heavily impact regional hydro-power productivity (15% and 42% losses on annual and seasonal basis, respectively), yet resulting in either marginal or negligible improvements of fluvial ecosystem.

  1. Habitat Evaluation Procedures (HEP) Report : Rainwater Wildlife Area, 1998-2001 Technical Report.

    Energy Technology Data Exchange (ETDEWEB)

    Childs, Allen

    2004-01-01

    The 8,768 acre Rainwater Wildlife Area was acquired in September 1998 by the Confederated Tribes of the Umatilla Indian Reservation (CTUIR) through an agreement with Bonneville Power Administration (BPA) to partially offset habitat losses associated with construction of the John Day and McNary hydroelectric facilities on the mainstem Columbia River. U.S. Fish and Wildlife Service (USFWS) Habitat Evaluation Procedures (HEP) were used to determine the number of habitat units credited to BPA for acquired lands. Upland and riparian forest, upland and riparian shrub, and grassland rover types are evaluated in this study. Targeted wildlife species include downy woodpecker (Picoides pubescens), black-capped chickadee (Parus atricopillus), blue grouse (Dendragapus obscurus), great blue heron (Ardea herodias), yellow warbler (Dendroica petechia), mink (Mustela vison), and Western meadowlark (Sturnella neglects). Habitat surveys were conducted in 1998 and 1999 in accordance with published HEP protocols and included 65,300, 594m{sup 2} plots, and 112 one-tenth-acre plots. Between 153.3 and 7,187.46 acres were evaluated for each target wildlife mitigation species. Derived habitat suitability indices were multiplied by corresponding cover-type acreages to determine the number of habitat units for each species. The total baseline habitat units credited to BPA for the Rainwater Wildlife Area and its seven target species is 5,185.3 habitat units. Factors limiting habitat suitability are related to the direct, indirect, and cumulative effects of past livestock grazing, road construction, and timber harvest which have simplified the structure, composition, and diversity of native plant communities. Alternatives for protecting and improving habitat suitability include exclusion of livestock grazing, road de-commissioning/obliteration, reforestation and thinning, control of competing and unwanted vegetation (including noxious weeds), reestablishing displaced or reduced native

  2. Developing a Land Suitability Index for Agricultural uses in Dry Lands from Geologic Point of View Using GIS - a Case Study from Jordan

    Directory of Open Access Journals (Sweden)

    Mohammmad Al Farajat

    2015-05-01

    Full Text Available DOI:10.17014/ijog.2.2.63-76In the context of the study, a Multi-criteria evaluation (MCE in GIS was used in developing suitability index to optimize suitable lands for agricultural uses and seasonal farming in dry lands from geologic point of view. This study was performed in the areas between Mafraq and Zarqa Cities in Jordan which are classified as arid lands. The study aims at protecting groundwater from pollution, reducing soil salting, reducing irrigation water loss caused by evaporation, and increasing crop productivity. The geo-environmental parameters of the named area including geology, groundwater depths, soil depths and textures, climatic conditions, topographic settings, and groundwater vulnerability conditions were mapped and converted into layers with special rates, given weights, and then modeled using the multi criteria evaluation (MCE option, using Decision Making Modeling in IDRISI (GIS software to reach at the best choice of lands for agricultural activities, and also to determine which of these lands are suitable for summer farming and which are suitable for winter farming.

  3. Habitat selection and management of the Hawaiian crow

    Science.gov (United States)

    Giffen, J.G.; Scott, J.M.; Mountainspring, S.

    1987-01-01

    The abundance and range of the Hawaiian crow, or alala, (Corvus hawaiiensis) have decreased drastically since the 1890's. Fewer than 10 breeding pairs remained in the wild in 1985. A sample of 82 nests during 1970-82 were used to determine habitat associations. Two hundred firty-nine alala observations were used to estimate densities occurring in different vegetation types in 1978. Compared to available habitat, more nests and higher bird densities during the breeding season occurred in areas where: (1) canopy cover was > 60%; (2) koa (Acacia koa) and ohia (Metrosideros polymorpha) were dominant species in the crown layer; (3) native plants constituted > 75% of the understory cover; and (4) the elevation was 1,100-1,500 m. Compared to breeding habitat, nonbreeding habitat tended to lie at lower elevations and in wetter forests having the crown layer dominated by ohia but lacking koa. Habitat loss is a major factor underlying the decline of this species although predation on fledgings, avian disease, and shooting also have reduced the population. Remaining key habitat areas have little or no legal protection through zoning and land ownership. Preserves should be established to encompass the location of existing pairs and to assure the provision of optimum breeding habitat and suitable nonbreeding habitat.

  4. Does habitat variability really promote metabolic network modularity?

    Science.gov (United States)

    Takemoto, Kazuhiro

    2013-01-01

    The hypothesis that variability in natural habitats promotes modular organization is widely accepted for cellular networks. However, results of some data analyses and theoretical studies have begun to cast doubt on the impact of habitat variability on modularity in metabolic networks. Therefore, we re-evaluated this hypothesis using statistical data analysis and current metabolic information. We were unable to conclude that an increase in modularity was the result of habitat variability. Although horizontal gene transfer was also considered because it may contribute for survival in a variety of environments, closely related to habitat variability, and is known to be positively correlated with network modularity, such a positive correlation was not concluded in the latest version of metabolic networks. Furthermore, we demonstrated that the previously observed increase in network modularity due to habitat variability and horizontal gene transfer was probably due to a lack of available data on metabolic reactions. Instead, we determined that modularity in metabolic networks is dependent on species growth conditions. These results may not entirely discount the impact of habitat variability and horizontal gene transfer. Rather, they highlight the need for a more suitable definition of habitat variability and a more careful examination of relationships of the network modularity with horizontal gene transfer, habitats, and environments.

  5. Natural Environment Suitability of China and Its Relationship with Population Distributions

    Directory of Open Access Journals (Sweden)

    Xiaohuan Yang

    2009-12-01

    Full Text Available The natural environment factor is one of the main indexes for evaluating human habitats, sustained economic growth and ecological health status. Based on Geographic Information System (GIS technology and an analytic hierarchy process method, this article presents the construction of the Natural Environment Suitability Index (NESI model of China by using natural environment data including climate, hydrology, surface configuration and ecological conditions. The NESI value is calculated in grids of 1 km by 1 km through ArcGIS. The spatial regularity of NESI is analyzed according to its spatial distribution and proportional structure. The relationship of NESI with population distribution and economic growth is also discussed by analyzing NESI results with population distribution data and GDP data in 1 km by 1 km grids. The study shows that: (1 the value of NESI is higher in the East and lower in the West in China; The best natural environment area is the Yangtze River Delta region and the worst are the northwest of Tibet and southwest of Xinjiang. (2 There is a close correlation among natural environment, population distribution and economic growth; the best natural environment area, the Yangtze River Delta region, is also the region with higher population density and richer economy. The worst natural environment areas, Northwest and Tibetan Plateau, are also regions with lower population density and poorer economies.

  6. Natural Environment Suitability of China and Its Relationship with Population Distributions

    Science.gov (United States)

    Yang, Xiaohuan; Ma, Hanqing

    2009-01-01

    The natural environment factor is one of the main indexes for evaluating human habitats, sustained economic growth and ecological health status. Based on Geographic Information System (GIS) technology and an analytic hierarchy process method, this article presents the construction of the Natural Environment Suitability Index (NESI) model of China by using natural environment data including climate, hydrology, surface configuration and ecological conditions. The NESI value is calculated in grids of 1 km by 1 km through ArcGIS. The spatial regularity of NESI is analyzed according to its spatial distribution and proportional structure. The relationship of NESI with population distribution and economic growth is also discussed by analyzing NESI results with population distribution data and GDP data in 1 km by 1 km grids. The study shows that: (1) the value of NESI is higher in the East and lower in the West in China; The best natural environment area is the Yangtze River Delta region and the worst are the northwest of Tibet and southwest of Xinjiang. (2) There is a close correlation among natural environment, population distribution and economic growth; the best natural environment area, the Yangtze River Delta region, is also the region with higher population density and richer economy. The worst natural environment areas, Northwest and Tibetan Plateau, are also regions with lower population density and poorer economies. PMID:20049243

  7. Blanding’s Turtle (Emydoidea blandingii Potential Habitat Mapping Using Aerial Orthophotographic Imagery and Object Based Classification

    Directory of Open Access Journals (Sweden)

    Douglas J. King

    2012-01-01

    Full Text Available Blanding’s turtle (Emydoidea blandingii is a threatened species under Canada’s Species at Risk Act. In southern Québec, field based inventories are ongoing to determine its abundance and potential habitat. The goal of this research was to develop means for mapping of potential habitat based on primary habitat attributes that can be detected with high-resolution remotely sensed imagery. Using existing spring leaf-off 20 cm resolution aerial orthophotos of a portion of Gatineau Park where some Blanding’s turtle observations had been made, habitat attributes were mapped at two scales: (1 whole wetlands; (2 within wetland habitat features of open water, vegetation (used for camouflage and thermoregulation, and logs (used for spring sun-basking. The processing steps involved initial pixel-based classification to eliminate most areas of non-wetland, followed by object-based segmentations and classifications using a customized rule sequence to refine the wetland map and to map the within wetland habitat features. Variables used as inputs to the classifications were derived from the orthophotos and included image brightness, texture, and segmented object shape and area. Independent validation using field data and visual interpretation showed classification accuracy for all habitat attributes to be generally over 90% with a minimum of 81.5% for the producer’s accuracy of logs. The maps for each attribute were combined to produce a habitat suitability map for Blanding’s turtle. Of the 115 existing turtle observations, 92.3% were closest to a wetland of the two highest suitability classes. High-resolution imagery combined with object-based classification and habitat suitability mapping methods such as those presented provide a much more spatially explicit representation of detailed habitat attributes than can be obtained through field work alone. They can complement field efforts to document and track turtle activities and can contribute to

  8. Habitat association and conservation implications of endangered Francois' langur (Trachypithecus francoisi.

    Directory of Open Access Journals (Sweden)

    Yajie Zeng

    Full Text Available Francois' langur (Trachypithecus francoisi is an endangered primate and endemic to the limestone forests of the tropical and subtropical zone of northern Vietnam and South-west China with a population of about 2,000 individuals. Conservation efforts are hampered by limited knowledge of habitat preference in its main distribution area. We surveyed the distribution of Francois' langur and modeled the relationship between the probability of use and habitat features in Mayanghe National Nature Reserve, Guizhou, China. The main objectives of this study were to provide quantitative information on habitat preference, estimating the availability of suitable habitat, and providing management guidelines for the effective conservation of this species. By comparing 92 used locations with habitat available in the reserve, we found that Francois' langur was mainly distributed along valleys and proportionally, used bamboo forests and mixed conifer-broadleaf forests more than their availability, whereas they tended to avoid shrubby areas and coniferous forests. The langur tended to occur at sites with lower elevation, steeper slope, higher tree canopy density, and a close distance to roads and water. The habitat occupancy probability was best modeled by vegetation type, vegetation coverage, elevation, slope degree, distances to nearest water, paved road, and farmland edge. The suitable habitat in this reserve concentrated in valleys and accounted for about 25% of the total reserve area. Our results showed that Francois' langur was not only restricted at the landscapes level at the regions with karst topography, limestone cliffs, and caves, but it also showed habitat preference at the local scale. Therefore, the protection and restoration of the langur preferred habitats such as mixed conifer-broadleaf forests are important and urgent for the conservation of this declining species.

  9. Seasonal variation in coastal marine habitat use by the European shag: Insights from fine scale habitat selection modeling and diet

    Science.gov (United States)

    Michelot, Candice; Pinaud, David; Fortin, Matthieu; Maes, Philippe; Callard, Benjamin; Leicher, Marine; Barbraud, Christophe

    2017-07-01

    to suitable habitats and preys.

  10. Modeling amphibian energetics, habitat suitability, and movements of western toads, Anaxyrus (=Bufo) boreas, across present and future landscapes

    Science.gov (United States)

    Bartelt, Paul E.; Klaver, Robert W.; Porter, Warren P.

    2010-01-01

    Effective conservation of amphibian populations requires the prediction of how amphibians use and move through a landscape. Amphibians are closely coupled to their physical environment. Thus an approach that uses the physiological attributes of amphibians, together with knowledge of their natural history, should be helpful. We used Niche Mapper™ to model the known movements and habitat use patterns of a population of Western toads (Anaxyrus (=Bufo) boreas) occupying forested habitats in southeastern Idaho. Niche Mapper uses first principles of environmental biophysics to combine features of topography, climate, land cover, and animal features to model microclimates and animal physiology and behavior across landscapes. Niche Mapper reproduced core body temperatures (Tc) and evaporation rates of live toads with average errors of 1.6 ± 0.4 °C and 0.8 ± 0.2 g/h, respectively. For four different habitat types, it reproduced similar mid-summer daily temperature patterns as those measured in the field and calculated evaporation rates (g/h) with an average error rate of 7.2 ± 5.5%. Sensitivity analyses indicate these errors do not significantly affect estimates of food consumption or activity. Using Niche Mapper we predicted the daily habitats used by free-ranging toads; our accuracy for female toads was greater than for male toads (74.2 ± 6.8% and 53.6 ± 15.8%, respectively), reflecting the stronger patterns of habitat selection among females. Using these changing to construct a cost surface, we also reconstructed movement paths that were consistent with field observations. The effect of climate warming on toads depends on the interaction of temperature and atmospheric moisture. If climate change occurs as predicted, results from Niche Mapper suggests that climate warming will increase the physiological cost of landscapes thereby limiting the activity for toads in different habitats.

  11. Vegetation Structure of Ebony Leaf Monkey (Trachypithecus auratus) Habitat in Kecubung Ulolanang Nature Preservation Central Java-Indonesia

    Science.gov (United States)

    Ervina, Rahmawati; Wasiq, Hidayat Jafron

    2018-02-01

    Kecubung Ulolanang Nature Preservation is ebony leaf monkey's habitats in Central Java Indonesia. Continuously degradation of their population is caused by illegal hunting and habitat degradation that made this species being vulnerable. Habitat conservation is one of important aspects to prevent them from extinction. The purpose of this research was to analyze the vegetation's structure and composition, which was potentially, becomes habitat and food source for the monkeys. Data collected using purposive sampling with line transect method of four different level of vegetation. Data analysis used Important Value Index and Diversity Index. There were 43 species of vegetation at seedling stage, 18 species at sapling stage, 8 species at poles stage and 27 species at trees stage. Species that had the highest important value index at seedling was Stenochlaena palustri , at the sapling was Gnetum gnemon, at pole was Swietenia mahagoni and at tree was Tectona grandis . Species of trees those were potentially to become habitat (food source) for ebony leaf monkey were T. grandis, Dipterocarpus gracilis, Quercus sundaica and Ficus superba. The highest diversity index was at seedling gwoth stage.

  12. Restricted cross-scale habitat selection by American beavers.

    Science.gov (United States)

    Francis, Robert A; Taylor, Jimmy D; Dibble, Eric; Strickland, Bronson; Petro, Vanessa M; Easterwood, Christine; Wang, Guiming

    2017-12-01

    Animal habitat selection, among other ecological phenomena, is spatially scale dependent. Habitat selection by American beavers Castor canadensis (hereafter, beaver) has been studied at singular spatial scales, but to date no research addresses multi-scale selection. Our objectives were to determine if beaver habitat selection was specialized to semiaquatic habitats and if variables explaining habitat selection are consistent between landscape and fine spatial scales. We built maximum entropy (MaxEnt) models to relate landscape-scale presence-only data to landscape variables, and used generalized linear mixed models to evaluate fine spatial scale habitat selection using global positioning system (GPS) relocation data. Explanatory variables between the landscape and fine spatial scale were compared for consistency. Our findings suggested that beaver habitat selection at coarse (study area) and fine (within home range) scales was congruent, and was influenced by increasing amounts of woody wetland edge density and shrub edge density, and decreasing amounts of open water edge density. Habitat suitability at the landscape scale also increased with decreasing amounts of grass frequency. As territorial, central-place foragers, beavers likely trade-off open water edge density (i.e., smaller non-forested wetlands or lodges closer to banks) for defense and shorter distances to forage and obtain construction material. Woody plants along edges and expanses of open water for predator avoidance may limit beaver fitness and subsequently determine beaver habitat selection.

  13. Fish habitat considerations associated with hydro-electric developments in Quebec region

    International Nuclear Information System (INIS)

    Bain, H.; Stoneman, M.

    2005-01-01

    Alternative approaches for evaluating the effects of 2 large Hydro Quebec proposed facilities on fish habitats were presented. The proposed projects will convert long stretches of river into water reservoirs and reduce the flow in the rivers below the impoundments for parts of the year. Rivers will be transformed into water reservoirs upstream by the dams, and a moderately large river will be transformed downstream into a much smaller river with a regulated flow. Productive capacity of fish populations is difficult to measure in large water bodies, and complications in the evaluation process have posed problems in the application of a traditional no-net-loss policy. It was suggested that estimates of biomass and productivity should be obtained from established methods of electrofishing combined with maps of the river and stream characteristics. For lakes and reservoirs, biomass and production will be estimated from models using a morphoedaphic index and measures of lake reservoir areas. Productivity will be partitioned among species according to surveys of existing lakes and reservoirs. It was also proposed that mitigation and compensation should be considered on a case-by-case basis related to importance of impact on fish production; geographic range of the impacts; regional fisheries management objectives for commercial, recreational, and subsistence fisheries and biodiversity conservation. Special attention will be given to listed species such as Atlantic salmon and lake sturgeon. Additional field sampling was recommended in areas impacted by the developments. Concerns about the technical methods used in sampling and monitoring data were reviewed, as well as issues concerning protected and unprotected species. It was suggested that predictive models of fish population characteristics will need to be parameterized for temperature ranges associated with the projects. It was noted that habitat suitability index methods do not consider the ecological flexibility

  14. Testing projected wild bee distributions in agricultural habitats: predictive power depends on species traits and habitat type.

    Science.gov (United States)

    Marshall, Leon; Carvalheiro, Luísa G; Aguirre-Gutiérrez, Jesús; Bos, Merijn; de Groot, G Arjen; Kleijn, David; Potts, Simon G; Reemer, Menno; Roberts, Stuart; Scheper, Jeroen; Biesmeijer, Jacobus C

    2015-10-01

    Species distribution models (SDM) are increasingly used to understand the factors that regulate variation in biodiversity patterns and to help plan conservation strategies. However, these models are rarely validated with independently collected data and it is unclear whether SDM performance is maintained across distinct habitats and for species with different functional traits. Highly mobile species, such as bees, can be particularly challenging to model. Here, we use independent sets of occurrence data collected systematically in several agricultural habitats to test how the predictive performance of SDMs for wild bee species depends on species traits, habitat type, and sampling technique. We used a species distribution modeling approach parametrized for the Netherlands, with presence records from 1990 to 2010 for 193 Dutch wild bees. For each species, we built a Maxent model based on 13 climate and landscape variables. We tested the predictive performance of the SDMs with independent datasets collected from orchards and arable fields across the Netherlands from 2010 to 2013, using transect surveys or pan traps. Model predictive performance depended on species traits and habitat type. Occurrence of bee species specialized in habitat and diet was better predicted than generalist bees. Predictions of habitat suitability were also more precise for habitats that are temporally more stable (orchards) than for habitats that suffer regular alterations (arable), particularly for small, solitary bees. As a conservation tool, SDMs are best suited to modeling rarer, specialist species than more generalist and will work best in long-term stable habitats. The variability of complex, short-term habitats is difficult to capture in such models and historical land use generally has low thematic resolution. To improve SDMs' usefulness, models require explanatory variables and collection data that include detailed landscape characteristics, for example, variability of crops and

  15. Climate effects on the distribution of wetland habitats and connectivity in networks of migratory waterbirds

    Science.gov (United States)

    Bellisario, Bruno; Cerfolli, Fulvio; Nascetti, Giuseppe

    2014-07-01

    The establishment and maintenance of conservation areas are among the most common measures to mitigate the loss of biodiversity. However, recent advances in conservation biology have challenged the reliability of such areas to cope with variation in climate conditions. Climate change can reshuffle the geographic distribution of species, but in many cases suitable habitats become scarce or unavailable, limiting the ability to migrate or adapt in response to modified environments. In this respect, the extent to which existing protected areas are able to compensate changes in habitat conditions to ensure the persistence of species still remains unclear. We used a spatially explicit model to measure the effects of climate change on the potential distribution of wetland habitats and connectivity of Natura 2000 sites in Italy. The effects of climate change were measured on the potential for water accumulation in a given site, as a surrogate measure for the persistence of aquatic ecosystems and their associated migratory waterbirds. Climate impacts followed a geographic trend, changing the distribution of suitable habitats for migrants and highlighting a latitudinal threshold beyond which the connectivity reaches a sudden collapse. Our findings show the relative poor reliability of most sites in dealing with changing habitat conditions and ensure the long-term connectivity, with possible consequences for the persistence of species. Although alterations of climate suitability and habitat destruction could impact critical areas for migratory waterbirds, more research is needed to evaluate all possible long-term effects on the connectivity of migratory networks.

  16. Comparing the plant diversity between artificial forest and nature growth forest in a giant panda habitat.

    Science.gov (United States)

    Kang, Dongwei; Wang, Xiaorong; Li, Shuang; Li, Junqing

    2017-06-15

    Artificial restoration is an important way to restore forests, but little is known about its effect on the habitat restoration of the giant panda. In the present study, we investigated the characteristics of artificial forest in the Wanglang Nature Reserve to determine whether through succession it has formed a suitable habitat for the giant panda. We compared artificial forest characteristics with those of natural habitat used by the giant panda. We found that the dominant tree species in artificial forest differed from those in the natural habitat. The artificial forest had lower plant species richness and diversity in the tree and shrub layers than did the latter, and its community structure was characterized by smaller tree and bamboo sizes, and fewer and lower bamboo clumps, but more trees and larger shrub sizes. The typical community collocation of artificial forest was a "Picea asperata + no-bamboo" model, which differs starkly from the giant panda's natural habitat. After several years of restoration, the artificial forest has failed to become a suitable habitat for the giant panda. Therefore, a simple way of planting individual trees cannot restore giant panda habitat; instead, habitat restoration should be based on the habitat requirements of the giant panda.

  17. Assessment of Brown Bear\\'s (Ursus arctos syriacus Winter Habitat Using Geographically Weighted Regression and Generalized Linear Model in South of Iran

    Directory of Open Access Journals (Sweden)

    A. A. Zarei

    2016-03-01

    Full Text Available Winter dens are one of the important components of brown bear's (Ursus arctos syriacus habitat, affecting their reproduction and survival. Therefore identification of factors affecting the habitat selection and suitable denning areas in the conservation of our largest carnivore is necessary. We used Geographically Weighted Logistic Regression (GWLR and Generalized Linear Model (GLM for modeling suitability of denning habitat in Kouhkhom region in Fars province. In the present research, 20 dens (presence locations and 20 caves where signs of bear were not found (absence locations were used as dependent variables and six environmental factors were used for each location as independent variables. The results of GLM showed that variables of distance to settlements, altitude, and distance to water were the most important parameters affecting suitability of the brown bear's denning habitat. The results of GWLR showed the significant local variations in the relationship between occurrence of brown bear dens and the variable of distance to settlements. Based on the results of both models, suitable habitats for denning of the species are impassable areas in the mountains and inaccessible for humans.

  18. Environmental suitability for Lutzomyia longipalpis in a subtropical city with a recently established visceral leishmaniasis transmission cycle, Argentina.

    Science.gov (United States)

    Berrozpe, Pablo; Lamattina, Daniela; Santini, María Soledad; Araujo, Analía Vanesa; Utgés, María Eugenia; Salomón, Oscar Daniel

    2017-10-01

    Visceral leishmaniasis (VL) is an endemic disease in northeastern Argentina including the Corrientes province, where the presence of the vector and canine cases of VL were recently confirmed in December 2008. The objective of this study was to assess the modelling of micro- and macro-habitat variables to evaluate the urban environmental suitability for the spatial distribution of Lutzomyia longipalpis presence and abundance in an urban scenario. Sampling of 45 sites distributed throughout Corrientes city (Argentina) was carried out using REDILA-BL minilight traps in December 2013. The sampled specimens were identified according to methods described by Galati (2003). The analysis of variables derived from the processing of satellite images (macro-habitat variables) and from the entomological sampling and surveys (micro-habitat variables) was performed using the statistical software R. Three generalised linear models were constructed composed of micro- and macro-habitat variables to explain the spatial distribution of the abundance of Lu. longipalpis and one composed of micro-habitat variables to explain the occurrence of the vector. A total of 609 phlebotominae belonging to five species were collected, of which 56% were Lu. longipalpis. In addition, the presence of Nyssomyia neivai and Migonemya migonei, which are vectors of tegumentary leishmaniasis, were also documented and represented 34.81% and 6.74% of the collections, respectively. The explanatory variable normalised difference vegetation index (NDVI) described the abundance distribution, whereas the presence of farmyard animals was important for explaining both the abundance and the occurrence of the vector. The results contribute to the identification of variables that can be used to establish priority areas for entomological surveillance and provide an efficient transfer tool for the control and prevention of vector-borne diseases.

  19. A Modelling Framework to Assess the Effect of Pressures on River Abiotic Habitat Conditions and Biota.

    Directory of Open Access Journals (Sweden)

    Jochem Kail

    Full Text Available River biota are affected by global reach-scale pressures, but most approaches for predicting biota of rivers focus on river reach or segment scale processes and habitats. Moreover, these approaches do not consider long-term morphological changes that affect habitat conditions. In this study, a modelling framework was further developed and tested to assess the effect of pressures at different spatial scales on reach-scale habitat conditions and biota. Ecohydrological and 1D hydrodynamic models were used to predict discharge and water quality at the catchment scale and the resulting water level at the downstream end of a study reach. Long-term reach morphology was modelled using empirical regime equations, meander migration and 2D morphodynamic models. The respective flow and substrate conditions in the study reach were predicted using a 2D hydrodynamic model, and the suitability of these habitats was assessed with novel habitat models. In addition, dispersal models for fish and macroinvertebrates were developed to assess the re-colonization potential and to finally compare habitat suitability and the availability/ability of species to colonize these habitats. Applicability was tested and model performance was assessed by comparing observed and predicted conditions in the lowland Treene River in northern Germany. Technically, it was possible to link the different models, but future applications would benefit from the development of open source software for all modelling steps to enable fully automated model runs. Future research needs concern the physical modelling of long-term morphodynamics, feedback of biota (e.g., macrophytes on abiotic habitat conditions, species interactions, and empirical data on the hydraulic habitat suitability and dispersal abilities of macroinvertebrates. The modelling framework is flexible and allows for including additional models and investigating different research and management questions, e.g., in climate impact

  20. Physical habitat and its alteration: A common ground for exposure of amphibians to environmental stressors

    Science.gov (United States)

    Bishop, Christine A.; Cunnington, David C.; Fellers, Gary M.; Gibbs, James P.; Pauli, Bruce D.; Rothermel, Betsie B.; Linder, Greg L.; Krest, Sherry K.; Sparling, Donald W.

    2003-01-01

    Amphibians as a class of vertebrates have persisted for hundreds of millions of years (Stebbins and Cohen 1995), but they are currently threatened by a variety of stressors, many resulting from human-related alterations of the environment. Most species of amphibians live closely associated with moist environments throughout their life and have evolved specialized adaptations that conserve water and reduce desiccation (Stebbins and Cohen 1995; Henry 2000; Chapter 2A). Amphibians are ectotherms, so their body temperatures fluctuate with the local environment. Latitude, elevation, and habitat affect environmental temperature and have a strong influence on amphibian distributions. Despite these physiological and habitat constraints, the 4750 species of amphibians in the world today have exploited a wide variety of habitats that range from dry deserts to tropical rain forests and from sea level to elevations above 4000 m (McDairmid and Mitchell 2000).The direct loss of suitable habitat has had a profound effect on amphibian populations (Johnson 1992), as it has on nearly all species of wildlife. In the U.S., 53% of wetlands have been lost to human development in the last 200 years (Dahl 1990). Similar loss of wetlands has occurred throughout much of the world, especially in developing countries (Miller 1993). In many regions, deforestation has reduced or eliminated suitable terrestrial habitats, and this may prove to be the largest global threat to amphibian populations (Johnson 1992). Eight thousand years ago, forests covered approximately 40% of the world’s land (6 billion hectares), but by 1997, the world’s forests had been reduced to 3.5 billion hectares, a 42% loss worldwide (CIDA 2001). The effect of habitat loss is generally both obvious and predictable; with increasing restriction of suitable habitat, amphibian populations will probably not survive. The anthropogenic effects on the quality of the habitat that remains are often less obvious.

  1. Mapping snags and understory shrubs for LiDAR based assessment of wildlife habitat suitability

    Science.gov (United States)

    Sebastian Martinuzzi; Lee A. Vierling; William A. Gould; Michael J. Falkowski; Jeffrey S. Evans; Andrew T. Hudak; Kerri T. Vierling

    2009-01-01

    The lack of maps depicting forest three-dimensional structure, particularly as pertaining to snags and understory shrub species distribution, is a major limitation for managing wildlife habitat in forests. Developing new techniques to remotely map snags and understory shrubs is therefore an important need. To address this, we first evaluated the use of LiDAR data for...

  2. Shallow rocky nursery habitat for fish: Spatial variability of juvenile fishes among this poorly protected essential habitat.

    Science.gov (United States)

    Cheminée, Adrien; Rider, Mary; Lenfant, Philippe; Zawadzki, Audrey; Mercière, Alexandre; Crec'hriou, Romain; Mercader, Manon; Saragoni, Gilles; Neveu, Reda; Ternon, Quentin; Pastor, Jérémy

    2017-06-15

    Coastal nursery habitats are essential for the renewal of adult fish populations. We quantified the availability of a coastal nursery habitat (shallow heterogeneous rocky bottoms) and the spatial variability of its juvenile fish populations along 250km of the Catalan coastline (France and Spain). Nurseries were present in 27% of the coastline, but only 2% of them benefited from strict protection status. For nine taxa characteristic of this habitat, total juvenile densities varied significantly between nursery sites along the coastline, with the highest densities being found on the northern sites. Recruitment level (i.e. a proxy of nursery value) was not explained by protection level, but it was moderately and positively correlated with an anthropization index. Patterns of spatial variations were taxa-specific. Exceptional observations of four juveniles of the protected grouper Epinephelus marginatus were recorded. Our data on habitat availability and recruitment levels provides important informations which help to focus MPA management efforts. Copyright © 2017 Elsevier Ltd. All rights reserved.

  3. Assessing habitat selection when availability changes

    Science.gov (United States)

    Arthur, S.; Garner, G.; ,

    1996-01-01

    We present a method of comparing data on habitat use and availability that allows availability to differ among observations. This method is applicable when habitats change over time and when animals are unable to move throughout a predetermined study area between observations. We used maximum-likelihood techniques to derive an index that estimates the probability that each habitat type would be used if all were equally available. We also demonstrate how these indices can be used to compare relative use of available habitats, assign them ranks, and assess statistical differences between pairs of indices. The set of these indices for all habitats can be compared between groups of animals that represent different seasons, sex or age classes, or experimental treatments. This method allows quantitative comparisons among types and is not affected by arbitrary decisions about which habitats to include in the study. We provide an example by comparing the availability of four categories of sea ice concentration to their use by adult female polar bears, whose movements were monitored by satellite radio tracking in the Bering and Chukchi Seas during 1990. Use of ice categories by bears was nonrandom, and the pattern of use differed between spring and late summer seasons.

  4. Where to Combat Shrub Encroachment in Alpine Timberline Ecosystems: Combining Remotely-Sensed Vegetation Information with Species Habitat Modelling.

    Directory of Open Access Journals (Sweden)

    Veronika Braunisch

    Full Text Available In many cultural landscapes, the abandonment of traditional grazing leads to encroachment of pastures by woody plants, which reduces habitat heterogeneity and impacts biodiversity typical of semi-open habitats. We developed a framework of mutually interacting spatial models to locate areas where shrub encroachment in Alpine treeline ecosystems deteriorates vulnerable species' habitat, using black grouse Tetrao tetrix (L. in the Swiss Alps as a study model. Combining field observations and remote-sensing information we 1 identified and located the six predominant treeline vegetation types; 2 modelled current black grouse breeding habitat as a function thereof so as to derive optimal habitat profiles; 3 simulated from these profiles the theoretical spatial extension of breeding habitat when assuming optimal vegetation conditions throughout; and used the discrepancy between (2 and (3 to 4 locate major aggregations of homogeneous shrub vegetation in otherwise suitable breeding habitat as priority sites for habitat restoration. All six vegetation types (alpine pasture, coniferous forest, Alnus viridis (Chaix, Rhododendron-dominated, Juniperus-dominated and mixed heathland were predicted with high accuracy (AUC >0.9. Breeding black grouse preferred a heterogeneous mosaic of vegetation types, with none exceeding 50% cover. While 15% of the timberline belt currently offered suitable breeding habitat, twice that fraction (29% would potentially be suitable when assuming optimal shrub and ground vegetation conditions throughout the study area. Yet, only 10% of this difference was attributed to habitat deterioration by shrub-encroachment of dense heathland (all types 5.2% and Alnus viridis (4.8%. The presented method provides both a general, large-scale assessment of areas covered by dense shrub vegetation as well as specific target values and priority areas for habitat restoration related to a selected target organism. This facilitates optimizing the

  5. Where to Combat Shrub Encroachment in Alpine Timberline Ecosystems: Combining Remotely-Sensed Vegetation Information with Species Habitat Modelling.

    Science.gov (United States)

    Braunisch, Veronika; Patthey, Patrick; Arlettaz, Raphaël

    2016-01-01

    In many cultural landscapes, the abandonment of traditional grazing leads to encroachment of pastures by woody plants, which reduces habitat heterogeneity and impacts biodiversity typical of semi-open habitats. We developed a framework of mutually interacting spatial models to locate areas where shrub encroachment in Alpine treeline ecosystems deteriorates vulnerable species' habitat, using black grouse Tetrao tetrix (L.) in the Swiss Alps as a study model. Combining field observations and remote-sensing information we 1) identified and located the six predominant treeline vegetation types; 2) modelled current black grouse breeding habitat as a function thereof so as to derive optimal habitat profiles; 3) simulated from these profiles the theoretical spatial extension of breeding habitat when assuming optimal vegetation conditions throughout; and used the discrepancy between (2) and (3) to 4) locate major aggregations of homogeneous shrub vegetation in otherwise suitable breeding habitat as priority sites for habitat restoration. All six vegetation types (alpine pasture, coniferous forest, Alnus viridis (Chaix), Rhododendron-dominated, Juniperus-dominated and mixed heathland) were predicted with high accuracy (AUC >0.9). Breeding black grouse preferred a heterogeneous mosaic of vegetation types, with none exceeding 50% cover. While 15% of the timberline belt currently offered suitable breeding habitat, twice that fraction (29%) would potentially be suitable when assuming optimal shrub and ground vegetation conditions throughout the study area. Yet, only 10% of this difference was attributed to habitat deterioration by shrub-encroachment of dense heathland (all types 5.2%) and Alnus viridis (4.8%). The presented method provides both a general, large-scale assessment of areas covered by dense shrub vegetation as well as specific target values and priority areas for habitat restoration related to a selected target organism. This facilitates optimizing the spatial

  6. Estimating effective landscape distances and movement corridors: Comparison of habitat and genetic data

    Science.gov (United States)

    Maria C. Mateo-Sanchez; Niko Balkenhol; Samuel Cushman; Trinidad Perez; Ana Dominguez; Santiago Saura

    2015-01-01

    Resistance models provide a key foundation for landscape connectivity analyses and are widely used to delineate wildlife corridors. Currently, there is no general consensus regarding the most effective empirical methods to parameterize resistance models, but habitat data (species’ presence data and related habitat suitability models) and genetic data are the...

  7. Global patterns of fragmentation and connectivity of mammalian carnivore habitat.

    Science.gov (United States)

    Crooks, Kevin R; Burdett, Christopher L; Theobald, David M; Rondinini, Carlo; Boitani, Luigi

    2011-09-27

    Although mammalian carnivores are vulnerable to habitat fragmentation and require landscape connectivity, their global patterns of fragmentation and connectivity have not been examined. We use recently developed high-resolution habitat suitability models to conduct comparative analyses and to identify global hotspots of fragmentation and connectivity for the world's terrestrial carnivores. Species with less fragmentation (i.e. more interior high-quality habitat) had larger geographical ranges, a greater proportion of habitat within their range, greater habitat connectivity and a lower risk of extinction. Species with higher connectivity (i.e. less habitat isolation) also had a greater proportion of high-quality habitat, but had smaller, not larger, ranges, probably reflecting shorter distances between habitat patches for species with restricted distributions; such species were also more threatened, as would be expected given the negative relationship between range size and extinction risk. Fragmentation and connectivity did not differ among Carnivora families, and body mass was associated with connectivity but not fragmentation. On average, only 54.3 per cent of a species' geographical range comprised high-quality habitat, and more troubling, only 5.2 per cent of the range comprised such habitat within protected areas. Identification of global hotspots of fragmentation and connectivity will help guide strategic priorities for carnivore conservation.

  8. Vegetation Structure of Ebony Leaf Monkey (Trachypithecus auratus Habitat in Kecubung Ulolanang Nature Preservation Central Java-Indonesia

    Directory of Open Access Journals (Sweden)

    Ervina Rahmawati

    2018-01-01

    Full Text Available Kecubung Ulolanang Nature Preservation is ebony leaf monkey’s habitats in Central Java Indonesia. Continuously degradation of their population is caused by illegal hunting and habitat degradation that made this species being vulnerable. Habitat conservation is one of important aspects to prevent them from extinction. The purpose of this research was to analyze the vegetation’s structure and composition, which was potentially, becomes habitat and food source for the monkeys. Data collected using purposive sampling with line transect method of four different level of vegetation. Data analysis used Important Value Index and Diversity Index. There were 43 species of vegetation at seedling stage, 18 species at sapling stage, 8 species at poles stage and 27 species at trees stage. Species that had the highest important value index at seedling was Stenochlaena palustri , at the sapling was Gnetum gnemon, at pole was Swietenia mahagoni and at tree was Tectona grandis . Species of trees those were potentially to become habitat (food source for ebony leaf monkey were T. grandis, Dipterocarpus gracilis, Quercus sundaica and Ficus superba. The highest diversity index was at seedling gwoth stage.

  9. Scale dependence in habitat selection: The case of the endangered brown bear (Ursus arctos) in the Cantabrian Range (NW Spain)

    Science.gov (United States)

    Maria C. Mateo Sanchez; Samuel A. Cushman; Santiago Saura

    2013-01-01

    Animals select habitat resources at multiple spatial scales. Thus, explicit attention to scale dependency in species-habitat relationships is critical to understand the habitat suitability patterns as perceived by organisms in complex landscapes. Identification of the scales at which particular environmental variables influence habitat selection may be as important as...

  10. Short-term effects of habitat fragmentation on the abundance and species richness of beetles in experimental alfalfa micro-landscapes

    OpenAIRE

    GREZ, AUDREY A.; ZAVIEZO, TANIA; REYES, SUSANA

    2004-01-01

    Habitat loss and fragmentation are considered as the main causes of biodiversity depression. Habitat loss implies a reduction of suitable habitat for organisms, and habitat fragmentation is a change in the spatial configuration of the landscape, with the remaining fragments resulting more or less isolated. Recent theory indicates that the effects of habitat loss are more important than those of habitat fragmentation, however there are few experimental studies evaluating both processes separat...

  11. Distribution and larval breeding habitats of Aedes mosquito species in residential areas of northwest Ethiopia.

    Science.gov (United States)

    Ferede, Getachew; Tiruneh, Moges; Abate, Ebba; Kassa, Wondmeneh Jemberie; Wondimeneh, Yitayih; Damtie, Demekech; Tessema, Belay

    2018-01-01

    The Aedes mosquito is a vector for transmitting many arboviruses. Knowledge of the breeding habitat of this vector is vital for implementing appropriate interventions. Thus, this study was conducted to determine the breeding habitats and presence of Aedes mosquito species in the study areas. A house-to-house cross-sectional survey of Aedes mosquito breeding habitats was carried out in Metema and Humera, Ethiopia, in August 2017. All available water-holding containers present in and around houses were inspected for the presence of immature stages of Aedes mosquitoes, and they were collected and reared to the adult stage for species identification. In the larval survey, the house index, container index, and Breteau index were computed as risk indices. Of the 384 houses surveyed for the presence of Aedes mosquito larval breeding, 98 were found to be positive for larvae. During the survey, a total of 566 containers were inspected, of which 186 were found to be infested with Aedes mosquito larvae, with a container index of 32.9, a house index of 25.5, and a Breteau index of 48.4. The most common Aedes mosquito breeding habitats were discarded tires (57.5%), followed by mud pots (30.0%). Of the 1,077 larvae and pupae collected and reared, Aedes aegypti (49.3%), Ae. vittatus (6.5%), and Culex species (44.2%) were identified. Discarded tires were the most preferred breeding habitats for Aedes mosquitoes. Moreover, Ae. aegypti , the main vector of dengue and other arboviruses, was identified for the first time in this region, suggesting a high potential for arbovirus transmission in the study areas.

  12. Using Machine Learning for Land Suitability Classification

    African Journals Online (AJOL)

    User

    West African Journal of Applied Ecology, vol. ... evidence for the utility of machine learning methods in land suitability classification especially MCS methods. ... Artificial intelligence tools. ..... Numerical values of index for the various classes.

  13. The endangered Ethiopian endemic Crotalaria trifoliolata (Leguminosae-Papilionoideae) and its little-known habitat

    DEFF Research Database (Denmark)

    Friis, Ib; Weber, Odile; van Breugel, Paulo

    2016-01-01

    to limestone habitats in the Kubayo National Forest, where it forms almost monospecific stands of up to one thousand individuals in glades and at forest margins. Predictive distribution models suggest uncertain suitability of the present habitats under future climatic conditions. Based on this and other...

  14. Abundance and Distribution Patterns of Thunnus albacares in Isla del Coco National Park through Predictive Habitat Suitability Models.

    Directory of Open Access Journals (Sweden)

    Cristina Gonzáles-Andrés

    Full Text Available Information on the distribution and habitat preferences of ecologically and commercially important species is essential for their management and protection. This is especially important as climate change, pollution, and overfishing change the structure and functioning of pelagic ecosystems. In this study, we used Bayesian hierarchical spatial-temporal models to map the Essential Fish Habitats of the Yellowfin tuna (Thunnus albacares in the waters around Isla del Coco National Park, Pacific Costa Rica, based on independent underwater observations from 1993 to 2013. We assessed if observed changes in the distribution and abundance of this species are related with habitat characteristics, fishing intensity or more extreme climatic events, including the El Niño Southern Oscillation, and changes on the average sea surface temperature. Yellowfin tuna showed a decreasing abundance trend in the sampled period, whereas higher abundances were found in shallow and warmer waters, with high concentration of chlorophyll-a, and in surrounding seamounts. In addition, El Niño Southern Oscillation events did not seem to affect Yellowfin tuna distribution and abundance. Understanding the habitat preferences of this species, using approaches as the one developed here, may help design integrated programs for more efficient management of vulnerable species.

  15. A fuzzy application on MICE hosting: An Iranian case study for locating suitable areas based on P.L Indexes

    Directory of Open Access Journals (Sweden)

    Nazanin Tabrizi

    2012-04-01

    Full Text Available Today, countries compete to gain political, economic, social and cultural advantages. In addition, cities are trying to demonstrate their predominance on local and regional levels and achieve development by using managerial science. Meetings, incentives, conventions and exhibitions tourism (MICE hosting as a significant element of urban tourism is one of the effective methods to obtain urban development around the world. However, no specialized planning and independent investments in regard to these activities have been organized in Iran. Aiming to identify suitable areas in the northern part of Iran, the present research intends to recognize the necessary physical and location related (P.L indexes to perform the specialized activities of MICE tourism in this region. So at first, indispensable indicators to accept special role of MICE tourism are identified and then using GIS and fuzzy method, adapted areas are assigned. The result map shows that a ribbon-like area near the Caspian Sea with two wide lands at central and western parts is a proper choice to host MICE activities in the region from the viewpoint of P.L indexes.

  16. Determination of the effects of fine-grained sediment and other limiting variables on trout habitat for selected streams in Wisconsin

    Science.gov (United States)

    Scudder, Barbara C.; Selbig, J.W.; Waschbusch, R.J.

    2000-01-01

    Two Habitat Suitability Index (HSI) models, developed by the U.S. Fish and Wildlife Service, were used to evaluate the effects of fine-grained (less than 2 millimeters) sediment on brook trout (Salvelinusfontinalis, Mitchill) and brown trout (Salmo trutta, Linnaeus) in 11 streams in west-central and southwestern Wisconsin. Our results indicated that fine-grained sediment limited brook trout habitat in 8 of 11 streams and brown trout habitat in only one stream. Lack of winter and escape cover for fry was the primary limiting variable for brown trout at 61 percent of the sites, and this factor also limited brook trout at several stations. Pool area or quality, in stream cover, streambank vegetation for erosion control, minimum flow, thalweg depth maximum, water temperature, spawning substrate, riffle dominant substrate, and dissolved oxygen also were limiting to trout in the study streams. Brook trout appeared to be more sensitive to the effects of fine-grained sediment than brown trout. The models for brook trout and brown trout appeared to be useful and objective screening tools for identifying variables limiting trout habitat in these streams. The models predicted that reduction in the amount of fine-grained sediment would improve brook trout habitat. These models may be valuable for establishing instream sediment-reduction goals; however, the decrease in sediment delivery needed to meet these goals cannot be estimated without quantitative data on land use practices and their effects on sediment delivery and retention by streams.

  17. A smartphone app and analysis framework for rapidly characterizing and predicting shorebird habitat

    Science.gov (United States)

    Thieler, E. R.; Zeigler, S. L.; Plant, N. G.; Gutierrez, B.; Winslow, L. A.; Hines, M. K.; Read, J. S.; Walker, J. I.

    2016-12-01

    We developed a smartphone application called iPlover as a distributed data collection system to gather synoptic observations of shorebird habitat selection preferences, and a Bayesian network that exploits the data to predict habitat suitability. We tested this approach to modeling habitat suitability for the federally listed piping plover (Charadrius melodus) on coastal beaches and barrier islands along 1500 km of coast from North Carolina to Maine, USA. Using agile software development approaches, the iPlover application was conceived, developed and deployed in just a few months following Hurricane Sandy in 2012. This application supported collaborative efforts of nearly 100 stakeholders, resulting in over 2000 data points describing piping plover habitat selection patterns. The data were analyzed in a Bayesian network to evaluate the probability that a specific combination of habitat variables is associated with a nesting site. Subsequent testing shows that iPlover data are robust to variability in user classification and that the Bayesian network has a high level of predictive accuracy. Our work addresses a variety of scientific problems in understanding and managing dynamic coastal landscapes for beach-dependent species that require biological and geological data that (1) span the range of relevant environments and habitats, (2) can be updated seasonally to interannually, and (3) capture spatial detail. It is difficult to acquire such data; the data often have limited focus due to resource constraints, can be challenging to coordinate between different regions, are collected by non-specialists, or lack observational uniformity. Furthermore, associated data analysis techniques are often limited in their ability to consider new information as data are collected from additional study sites and updated. We present examples of how this approach can be used to map past, present, and future habitat suitability for sites of interest. We also describe lessons learned

  18. Lichens of neglected habitats in Eastern and East-Central European lowlands

    Directory of Open Access Journals (Sweden)

    Jurga Motiejūnaitē

    2013-12-01

    Full Text Available Situation of lichens of aquatic and transient habitats in Eastern and East-Central European lowlands is discussed basing on example of several selected species: Leptogium biatorinum, Sarcosagium campestre, Steinia geophana, Verrucaria aquatilis, V. hydrela, V. praetermissa, V. xyloxena. Both habitat types are generally very much neglected in the region and all species show large spatial gaps in recording, which makes it difficult to judge both about their true distribution limits and spreading dynamics. On the other hand, targeted search through the suitable habitats and abundance of such indicate that many of these lichens are probably not uncommon in the region.

  19. Scenario-Led Habitat Modelling of Land Use Change Impacts on Key Species.

    Directory of Open Access Journals (Sweden)

    Matthew Geary

    Full Text Available Accurate predictions of the impacts of future land use change on species of conservation concern can help to inform policy-makers and improve conservation measures. If predictions are spatially explicit, predicted consequences of likely land use changes could be accessible to land managers at a scale relevant to their working landscape. We introduce a method, based on open source software, which integrates habitat suitability modelling with scenario-building, and illustrate its use by investigating the effects of alternative land use change scenarios on landscape suitability for black grouse Tetrao tetrix. Expert opinion was used to construct five near-future (twenty years scenarios for the 800 km2 study site in upland Scotland. For each scenario, the cover of different land use types was altered by 5-30% from 20 random starting locations and changes in habitat suitability assessed by projecting a MaxEnt suitability model onto each simulated landscape. A scenario converting grazed land to moorland and open forestry was the most beneficial for black grouse, and 'increased grazing' (the opposite conversion the most detrimental. Positioning of new landscape blocks was shown to be important in some situations. Increasing the area of open-canopy forestry caused a proportional decrease in suitability, but suitability gains for the 'reduced grazing' scenario were nonlinear. 'Scenario-led' landscape simulation models can be applied in assessments of the impacts of land use change both on individual species and also on diversity and community measures, or ecosystem services. A next step would be to include landscape configuration more explicitly in the simulation models, both to make them more realistic, and to examine the effects of habitat placement more thoroughly. In this example, the recommended policy would be incentives on grazing reduction to benefit black grouse.

  20. Assessment of Climate Suitability of Maize in South Korea

    Science.gov (United States)

    Hyun, S.; Choi, D.; Seo, B.

    2017-12-01

    Assessing suitable areas for crops would be useful to design alternate cropping systems as an adaptation option to climate change adaptation. Although suitable areas could be identified by using a crop growth model, it would require a number of input parameters including cultivar and soil. Instead, a simple climate suitability model, e.g., EcoCrop model, could be used for an assessment of climate suitability for a major grain crop. The objective of this study was to assess of climate suitability for maize using the EcoCrop model under climate change conditions in Korea. A long term climate data from 2000 - 2100 were compiled from weather data source. The EcoCrop model implemented in R was used to determine climate suitability index at each grid cell. Overall, the EcoCrop model tended to identify suitable areas for maize production near the coastal areas whereas the actual major production areas located in inland areas. It is likely that the discrepancy between assessed and actual crop production areas would result from the socioeconomic aspects of maize production. Because the price of maize is considerably low, maize has been grown in an area where moisture and temperature conditions would be less than optimum. In part, a simple algorithm to predict climate suitability for maize would caused a relatively large error in climate suitability assessment under the present climate conditions. In 2050s, the climate suitability for maize increased in a large areas in southern and western part of Korea. In particular, the plain areas near the coastal region had considerably greater suitability index in the future compared with mountainous areas. The expansion of suitable areas for maize would help crop production policy making such as the allocation of rice production area for other crops due to considerably less demand for the rice in Korea.

  1. The effects of habitat, climate, and Barred Owls on long-term demography of Northern Spotted Owls

    Science.gov (United States)

    Dugger, Catherine; Forsman, Eric D.; Franklin, Alan B.; Davis, Raymond J.; White, Gary C.; Schwarz, Carl J.; Burnham, Kenneth P.; Nichols, James D.; Hines, James E.; Yackulic, Charles B.; Doherty, Paul F.; Bailey, Larissa; Clark, Darren A.; Ackers, Steven H.; Andrews, Lawrence S.; Augustine, Benjamin; Biswell, Brian L.; Blakesley, Jennifer; Carlson, Peter C.; Clement, Matthew J.; Diller, Lowell V.; Glenn, Elizabeth M.; Green, Adam; Gremel, Scott A.; Herter, Dale R.; Higley, J. Mark; Hobson, Jeremy; Horn, Rob B.; Huyvaert, Kathryn P.; McCafferty, Christopher; McDonald, Trent; McDonnell, Kevin; Olson, Gail S.; Reid, Janice A.; Rockweit, Jeremy; Ruiz, Viviana; Saenz, Jessica; Sovern, Stan G.

    2016-01-01

    covariates. In contrast, meta-analysis results suggested that Spotted Owl survival was higher across all study areas when the Pacific Decadal Oscillation (PDO) was in a warming phase and the Southern Oscillation Index (SOI) was negative, with a strongly negative SOI indicative of El Niño events. The best model that included the Barred Owl covariate (BO) was ranked 4th and also included the PDO covariate, but the BO effect was strongly negative. Our results indicated that Northern Spotted Owl populations were declining throughout the range of the subspecies and that annual rates of decline were accelerating in many areas. We observed strong evidence that Barred Owls negatively affected Spotted Owl populations, primarily by decreasing apparent survival and increasing local territory extinction rates. However, the amount of suitable owl habitat, local weather, and regional climatic patterns also were related to survival, occupancy (via colonization rate), recruitment, and, to a lesser extent, fecundity, although there was inconsistency in regard to which covariates were important for particular demographic parameters or across study areas. In the study areas where habitat was an important source of variation for Spotted Owl demographics, vital rates were generally positively associated with a greater amount of suitable owl habitat. However, Barred Owl densities may now be high enough across the range of the Northern Spotted Owl that, despite the continued management and conservation of suitable owl habitat on federal lands, the long-term prognosis for the persistence of Northern Spotted Owls may be in question without additional management intervention. Based on our study, the removal of Barred Owls from the Green Diamond Resources (GDR) study area had rapid, positive effects on Northern Spotted Owl survival and the rate of population change, supporting the hypothesis that, along with habitat conservation and management, Barred Owl removal may be able to slow or reverse

  2. Habitat use of barnacle geese at a subarctic salt marsh in the Kolokolkova Bay, Russia

    NARCIS (Netherlands)

    van der Graaf, AJ; Lavrinenko, OV; Elsakov, [No Value; van Eerden, MR; Stahl, J

    2004-01-01

    Along the east Atlantic migratory flyway, goose and swan species rely on the availability of suitable coastal habitats as staging sites during migration and for breeding. Especially for the Russian part of the flyway, detailed descriptions of these habitats in relation to use by herbivores are

  3. Assessing juvenile salmon rearing habitat and associated predation risk in a lower Snake River reservoir

    Science.gov (United States)

    Tiffan, Kenneth F.; Hatten, James R.; Trachtenbarg, David A

    2015-01-01

    Subyearling fall Chinook salmon (Oncorhynchus tshawytscha) in the Columbia River basin exhibit a transient rearing strategy and depend on connected shoreline habitats during freshwater rearing. Impoundment has greatly reduced the amount of shallow-water rearing habitat that is exacerbated by the steep topography of reservoirs. Periodic dredging creates opportunities to strategically place spoils to increase the amount of shallow-water habitat for subyearlings while at the same time reducing the amount of unsuitable area that is often preferred by predators. We assessed the amount and spatial arrangement of subyearling rearing habitat in Lower Granite Reservoir on the Snake River to guide future habitat improvement efforts. A spatially explicit habitat assessment was conducted using physical habitat data, two-dimensional hydrodynamic modelling and a statistical habitat model in a geographic information system framework. We used field collections of subyearlings and a common predator [smallmouth bass (Micropterus dolomieu)] to draw inferences about predation risk within specific habitat types. Most of the high-probability rearing habitat was located in the upper half of the reservoir where gently sloping landforms created low lateral bed slopes and shallow-water habitats. Only 29% of shorelines were predicted to be suitable (probability >0.5) for subyearlings, and the occurrence of these shorelines decreased in a downstream direction. The remaining, less suitable areas were composed of low-probability habitats in unmodified (25%) and riprapped shorelines (46%). As expected, most subyearlings were found in high-probability habitat, while most smallmouth bass were found in low-probability locations. However, some subyearlings were found in low-probability habitats, such as riprap, where predation risk could be high. Given their transient rearing strategy and dependence on shoreline habitats, subyearlings could benefit from habitat creation efforts in the lower

  4. The scientific basis for modeling Northern Spotted Owl habitat: A response to Loehle, Irwin, Manly, and Merrill

    Science.gov (United States)

    Jeffrey R. Dunk; Brian Woodbridge; Elizabeth M. Glenn; Raymond J. Davis; Katherine Fitzgerald; Paul Henson; David W. LaPlante; Bruce G. Marcot; Barry R. Noon; Martin G. Raphael; Nathan H. Schumaker; Brendan. White

    2015-01-01

    The U.S. Fish and Wildlife Service recently revised the recovery plan (USFWS, 2011) and designated Critical Habitat (USFWS, 2012a) for the Northern Spotted Owl (Strix occidentalis caurina). The Critical Habitat designation was based in part on a map of relative habitat suitability that was developed by USFWS (2011, 2012b) for this purpose. Loehle...

  5. Physical habitat classification and instream flow modeling to determine habitat availability during low-flow periods, North Fork Shenandoah River, Virginia

    Science.gov (United States)

    Krstolic, Jennifer L.; Hayes, Donald C.; Ruhl, Peter M.

    2006-01-01

    Increasing development and increasing water withdrawals for public, industrial, and agricultural water supply threaten to reduce streamflows in the Shenandoah River basin in Virginia. Water managers need more information to balance human water-supply needs with the daily streamflows necessary for maintaining the aquatic ecosystems. To meet the need for comprehensive information on hydrology, water supply, and instream-flow requirements of the Shenandoah River basin, the U.S. Geological Survey and the Northern Shenandoah Valley Regional Commission conducted a cooperative investigation of habitat availability during low-flow periods on the North Fork Shenandoah River. Historic streamflow data and empirical data on physical habitat, river hydraulics, fish community structure, and recreation were used to develop a physical habitat simulation model. Hydraulic measurements were made during low, medium, and high flows in six reaches at a total of 36 transects that included riffles, runs, and pools, and that had a variety of substrates and cover types. Habitat suitability criteria for fish were developed from detailed fish-community sampling and microhabitat observations. Fish were grouped into four guilds of species and life stages with similar habitat requirements. Simulated habitat was considered in the context of seasonal flow regimes to show the availability of flows that sustain suitable habitat during months when precipitation and streamflow are scarce. The North Fork Shenandoah River basin was divided into three management sections for analysis purposes: the upper section, middle section, and lower section. The months of July, August, and September were chosen to represent a low-flow period in the basin with low mean monthly flows, low precipitation, high temperatures, and high water withdrawals. Exceedance flows calculated from the combined data from these three months describe low-flow periods on the North Fork Shenandoah River. Long-term records from three

  6. [Fish community structure and its seasonal change in subtidal sandy beach habitat off southern Gouqi Island].

    Science.gov (United States)

    Wang, Zhen-Hua; Wang, Kai; Zhao, Jing; Zhang, Shou-Yu

    2011-05-01

    To understand the characteristics of fish community structure in sandy beach habitats of island reef water areas, and to evaluate the potential capacity of these habitats in local fish stock maintenance, fishes were monthly collected with multi-mesh trammel nets in 2009 from the subtidal sandy beach habitat off southern Gouqi Island, taking the adjacent rocky reef habitat as the control. alpha and beta species diversity indices, index of relative importance (IRI), relative catch rate, and dominance curve for abundance and biomass (ABC curve) were adopted to compare the fish species composition, diversity, and community pattern between the two habitats, and multivariate statistical analyses such as non-metric multidimensional scaling (nMDS) and cluster were conducted to discuss the fish assemblage patterns. A total of 63 fish species belonging to 11 orders, 38 families, and 56 genera were collected, of which, 46 fish species were appeared in the two habitats. Due to the appearance of more warm water species in sandy bottom, the fishes in subtidal sandy beach habitat showed much higher richness, and the abundance catch rate (ACR) from May to July was higher than that in rocky reef habitat. In most rest months, the ACR in subtidal sandy beach habitat also showed the similar trend. However, the species richness and diversity in spring and summer were significantly lower in subtidal sandy beach habitat than in rocky reef habitat, because of the high species dominance and low evenness in the sandy beach habitat. Japanese tonguefish (Paraplagusia japonica) was the indicator species in the sandy beach habitat, and dominated in early spring, later summer, autumn, and winter when the fishing pressure was not strong. In sandy bottom, a unique community structure was formed and kept in dynamic, due to the nursery use of sandy beach by Japanese anchovy (Engraulis japonicus) from May to July, the gathering of gray mullet (Mugil cephalus) in most months for feeding, and the large

  7. Skipjack Tuna Availability for Purse Seine Fisheries Is Driven by Suitable Feeding Habitat Dynamics in the Atlantic and Indian Oceans

    Directory of Open Access Journals (Sweden)

    Jean-Noël Druon

    2017-10-01

    Full Text Available An Ecological Niche model was developed for skipjack tuna (Katsuwonus pelamis, SKJ in the Eastern Central Atlantic Ocean (AO and Western Indian Ocean (IO using an extensive set of presence data collected by the European purse seine fleet (1998–2014. Chlorophyll-a fronts were used as proxy for food availability while mixed layer depth, sea surface temperature, dissolved oxygen, salinity, current intensity, and height anomaly variables were selected to describe SKJ's abiotic environmental preferences. The resultant ecological niche included both mesoscale eddy-type productive features that displayed latitudinal range in the IO to large scale upwelling systems that shrink and swell seasonally in the AO. Overall, 83% of all free swimming school sets (FSC and 75% of drifting fish aggregating device sets (dFAD that contained SKJ occurred within 25 km of favorable feeding habitat. In the AO, 34% of dFAD sets were made more than 100 km away from this habitat, mostly in the surface chlorophyll-a poor environment of the Guinea Current. These distant sets represent 10% of dFAD sets in the IO and 8% of all FSC sets. Our results suggest that the Mozambique Channel in the IO, with its simultaneously favorable feeding and spawning conditions, may seasonally offer a better SKJ nursery habitat than the Guinea Current which shows a substantially poorer feeding capacity. With the exception of this latter area, our results also suggest that fishing accessibility will be higher in months where the size of the favorable feeding habitats are reduced, likely because this reduction drives a geographical contraction in SKJ populations. The observed relationship between the annual size of favorable feeding habitat and both annual catch rates and total catches in the IO is consistent with the near-full exploitation of this stock that has occurred since the 2000s. Moreover, it suggests that annual habitat size could be used as an indicator of growth capacity for this

  8. Fish habitat regression under water scarcity scenarios in the Douro River basin

    Science.gov (United States)

    Segurado, Pedro; Jauch, Eduardo; Neves, Ramiro; Ferreira, Teresa

    2015-04-01

    Climate change will predictably alter hydrological patterns and processes at the catchment scale, with impacts on habitat conditions for fish. The main goals of this study are to identify the stream reaches that will undergo more pronounced flow reduction under different climate change scenarios and to assess which fish species will be more affected by the consequent regression of suitable habitats. The interplay between changes in flow and temperature and the presence of transversal artificial obstacles (dams and weirs) is analysed. The results will contribute to river management and impact mitigation actions under climate change. This study was carried out in the Tâmega catchment of the Douro basin. A set of 29 Hydrological, climatic, and hydrogeomorphological variables were modelled using a water modelling system (MOHID), based on meteorological data recorded monthly between 2008 and 2014. The same variables were modelled considering future climate change scenarios. The resulting variables were used in empirical habitat models of a set of key species (brown trout Salmo trutta fario, barbell Barbus bocagei, and nase Pseudochondrostoma duriense) using boosted regression trees. The stream segments between tributaries were used as spatial sampling units. Models were developed for the whole Douro basin using 401 fish sampling sites, although the modelled probabilities of species occurrence for each stream segment were predicted only for the Tâmega catchment. These probabilities of occurrence were used to classify stream segments into suitable and unsuitable habitat for each fish species, considering the future climate change scenario. The stream reaches that were predicted to undergo longer flow interruptions were identified and crossed with the resulting predictive maps of habitat suitability to compute the total area of habitat loss per species. Among the target species, the brown trout was predicted to be the most sensitive to habitat regression due to the

  9. Nesting Habitat Suitability for Olive Ridley Turtles (Lepidochelys Olivacea at the Gahirmatha Rookery, Odisha Coast of India

    Directory of Open Access Journals (Sweden)

    Satyaranjan BEHERA

    2013-12-01

    Full Text Available The changes in the beach dynamics at Gahirmatha sea turtle rookery along Odisha coast of India have forced the olive ridley turtles to nests in a non-conducive environment. In the recent past, non-availability of nesting beach due to erosion was hypothesized to be one of the major reasons for non-occurrence of arribada at Gahirmatha. This paper reviews the current status of nesting habitat for olive ridley turtles at Gahirmatha and suggests onshore and offshore developmental activities close to Gahirmatha rookery should be monitored efficiently so that future arribada at this rookery should not be troubled due to habitat destruction.

  10. A guide to calculating habitat-quality metrics to inform conservation of highly mobile species

    Science.gov (United States)

    Bieri, Joanna A.; Sample, Christine; Thogmartin, Wayne E.; Diffendorfer, James E.; Earl, Julia E.; Erickson, Richard A.; Federico, Paula; Flockhart, D. T. Tyler; Nicol, Sam; Semmens, Darius J.; Skraber, T.; Wiederholt, Ruscena; Mattsson, Brady J.

    2018-01-01

    Many metrics exist for quantifying the relative value of habitats and pathways used by highly mobile species. Properly selecting and applying such metrics requires substantial background in mathematics and understanding the relevant management arena. To address this multidimensional challenge, we demonstrate and compare three measurements of habitat quality: graph-, occupancy-, and demographic-based metrics. Each metric provides insights into system dynamics, at the expense of increasing amounts and complexity of data and models. Our descriptions and comparisons of diverse habitat-quality metrics provide means for practitioners to overcome the modeling challenges associated with management or conservation of such highly mobile species. Whereas previous guidance for applying habitat-quality metrics has been scattered in diversified tracks of literature, we have brought this information together into an approachable format including accessible descriptions and a modeling case study for a typical example that conservation professionals can adapt for their own decision contexts and focal populations.Considerations for Resource ManagersManagement objectives, proposed actions, data availability and quality, and model assumptions are all relevant considerations when applying and interpreting habitat-quality metrics.Graph-based metrics answer questions related to habitat centrality and connectivity, are suitable for populations with any movement pattern, quantify basic spatial and temporal patterns of occupancy and movement, and require the least data.Occupancy-based metrics answer questions about likelihood of persistence or colonization, are suitable for populations that undergo localized extinctions, quantify spatial and temporal patterns of occupancy and movement, and require a moderate amount of data.Demographic-based metrics answer questions about relative or absolute population size, are suitable for populations with any movement pattern, quantify demographic

  11. West Foster Creek 2007 Follow-up Habitat Evaluation Procedures (HEP) Report.

    Energy Technology Data Exchange (ETDEWEB)

    Ashley, Paul R.

    2008-02-01

    A follow-up habitat evaluation procedures (HEP) analysis was conducted on the West Foster Creek (Smith acquisition) wildlife mitigation site in May 2007 to determine the number of additional habitat units to credit Bonneville Power Administration (BPA) for providing funds to enhance and maintain the project site as partial mitigation for habitat losses associated with construction of Grand Coulee Dam. The West Foster Creek 2007 follow-up HEP survey generated 2,981.96 habitat units (HU) or 1.51 HUs per acre for a 34% increase (+751.34 HUs) above baseline HU credit (the 1999 baseline HEP survey generated 2,230.62 habitat units or 1.13 HUs per acre). The 2007 follow-up HEP analysis yielded 1,380.26 sharp-tailed grouse (Tympanuchus phasianellus) habitat units, 879.40 mule deer (Odocoileus hemionus) HUs, and 722.29 western meadowlark (Sturnella neglecta) habitat units. Mule deer and sharp-tailed grouse habitat units increased by 346.42 HUs and 470.62 HUs respectively over baseline (1999) survey results due largely to cessation of livestock grazing and subsequent passive restoration. In contrast, the western meadowlark generated slightly fewer habitat units in 2007 (-67.31) than in 1999, because of increased shrub cover, which lowers habitat suitability for that species.

  12. Modeling the Habitat of the Red-Crowned Crane (Grus japonensis Wintering in Cheorwon-Gun to Support Decision Making

    Directory of Open Access Journals (Sweden)

    Ho Gul Kim

    2016-06-01

    Full Text Available Cheorwon-gun is an important wintering area for the red-crowned crane (Grus japonensis. Although eco-tourism has been recently proposed as a means to stimulate the local economy, it may have adverse effects on the crane. We believe a science-based conservation plan is needed to mitigate these negative effects. To this end, our study had three objectives: (1 to analyze the red-crowned crane habitat and its suitability in Cheorwon-gun, using field surveys and habitat modeling; (2 to check the feasibility of alternative habitat patches across demilitarized zones (DMZs; and (3 to propose a conceptual diagram that minimizes habitat loss during development activities. We aim to quantify habitat suitability, the farmland area needed to support existing crane populations in wintertime, disturbance caused by human activities, and vehicular spatial patterns. These data could be used in spatial planning. The framework of this study and the process of making a conceptual diagram could be applied to other areas where there is a conflict between development and habitat conservation.

  13. Modification of Low Refractive Index Polycarbonate for High Refractive Index Applications

    Directory of Open Access Journals (Sweden)

    Gunjan Suri

    2009-01-01

    Full Text Available Polycarbonates and polythiourethanes are the most popular materials in use today, for optical applications. Polycarbonates are of two types which fall in the category of low refractive index and medium refractive index. The present paper describes the conversion of low refractive index polycarbonates into high refractive index material by the use of a high refractive index monomer, polythiol, as an additive. Novel polycarbonates, where the properties of refractive index and Abbe number can be tailor made, have been obtained. Thermal studies and refractive index determination indicate the formation of a new polymer with improved properties and suitable for optical applications.

  14. Adaptation of the QBR index for use in riparian forests of central Ohio

    Science.gov (United States)

    Stephanie R. Colwell; David M. Hix

    2008-01-01

    Although high quality riparian forests are an endangered ecosystem type throughout the world, there has been no ecological index to measure the habitat quality of riparian forests in Ohio. The QBR (qualitat del bosc de ribera, or riparian forest quality) index was developed to assess the quality of habitat in Mediterranean forested riparian areas, and we have modified...

  15. Environmental flow assessments for transformed estuaries

    Science.gov (United States)

    Sun, Tao; Zhang, Heyue; Yang, Zhifeng; Yang, Wei

    2015-01-01

    Here, we propose an approach to environmental flow assessment that considers spatial pattern variations in potential habitats affected by river discharges and tidal currents in estuaries. The approach comprises four steps: identifying and simulating the distributions of critical environmental factors for habitats of typical species in an estuary; mapping of suitable habitats based on spatial distributions of the Habitat Suitability Index (HSI) and adopting the habitat aggregation index to understand fragmentation of potential suitable habitats; defining variations in water requirements for a certain species using trade-off analysis for different protection objectives; and recommending environmental flows in the estuary considering the compatibility and conflict of freshwater requirements for different species. This approach was tested using a case study in the Yellow River Estuary. Recommended environmental flows were determined by incorporating the requirements of four types of species into the assessments. Greater variability in freshwater inflows could be incorporated into the recommended environmental flows considering the adaptation of potential suitable habitats with variations in the flow regime. Environmental flow allocations should be conducted in conjunction with land use conflict management in estuaries. Based on the results presented here, the proposed approach offers flexible assessment of environmental flow for aquatic ecosystems that may be subject to future change.

  16. [Prediction of the suitable distribution and responses to climate change of Elaeagnus mollis in Shanxi Province, China].

    Science.gov (United States)

    Zhang, Yin Bo; Gao, Chen Hong; Qin, Hao

    2018-04-01

    Understanding the responses of the habitats of endangered species to climate change is of great significance for biodiversity conservation and the maintenance of the integrity of ecosystem function. In this study, the potential suitable distribution habitats of Elaeagnus mollis in Shanxi Province was simulated by the maximum entropy model, based on 73 occurrence field records and 35 environmental factors under the current climate condition. Moreover, with the Fifth Assessment Report of Intergovernmental Panel on Climate Change, the dynamics of distribution pattern was analyzed for E. mollis under different climate scenarios. The results showed that the area under the receiver operating characteristic curve (AUC) value was 0.987, indicating that the data fitted the model very well and that the prediction was highly reliable. Results from the Jackknife test showed that the main environmental variables affecting the E. mollis distribution were the precipitation seasonality, the range of annual temperature, annual mean temperature, isothermality, annual precipitation, and pH of topsoil, with the cumulative contribution reaching 94.8%. At present, the potential suitable habitats of E. mollis are mainly located in two regions, the southern of Lyuliang Mountain and Zhongtiao Mountain in Shanxi Province. Under different climate scenarios, the total suitable area of E. mollis would shrink in 2070s. In RCP 2.6 the suitable area would firstly increase and then decrease, while in RCP 4.5 and RCP 8.5 it would response sensitively and first decrease and then increase. Its spatial distribution in two suitable regions would show divergent responses to climate change. The distribution in southern Lyuliang Mountain would fluctuate slightly in latitudinal direction, while that in Zhongtiao Mountain would migrate along elevation.

  17. Predicting habitat distribution to conserve seagrass threatened by sea level rise

    Science.gov (United States)

    Saunders, M. I.; Baldock, T.; Brown, C. J.; Callaghan, D. P.; Golshani, A.; Hamylton, S.; Hoegh-guldberg, O.; Leon, J. X.; Lovelock, C. E.; Lyons, M. B.; O'Brien, K.; Mumby, P.; Phinn, S. R.; Roelfsema, C. M.

    2013-12-01

    Sea level rise (SLR) over the 21st century will cause significant redistribution of valuable coastal habitats. Seagrasses form extensive and highly productive meadows in shallow coastal seas support high biodiversity, including economically valuable and threatened species. Predictive habitat models can inform local management actions that will be required to conserve seagrass faced with multiple stressors. We developed novel modelling approaches, based on extensive field data sets, to examine the effects of sea level rise and other stressors on two representative seagrass habitats in Australia. First, we modelled interactive effects of SLR, water clarity and adjacent land use on estuarine seagrass meadows in Moreton Bay, Southeast Queensland. The extent of suitable seagrass habitat was predicted to decline by 17% by 2100 due to SLR alone, but losses were predicted to be significantly reduced through improvements in water quality (Fig 1a) and by allowing space for seagrass migration with inundation. The rate of sedimentation in seagrass strongly affected the area of suitable habitat for seagrass in sea level rise scenarios (Fig 1b). Further research to understand spatial, temporal and environmental variability of sediment accretion in seagrass is required. Second, we modelled changes in wave energy distribution due to predicted SLR in a linked coral reef and seagrass ecosystem at Lizard Island, Great Barrier Reef. Scenarios where the water depth over the coral reef deepened due to SLR and minimal reef accretion, resulted in larger waves propagating shoreward, changing the existing hydrodynamic conditions sufficiently to reduce area of suitable habitat for seagrass. In a scenario where accretion of the coral reef was severely compromised (e.g. warming, acidification, overfishing), the probability of the presence of seagrass declined significantly. Management to maintain coral health will therefore also benefit seagrasses subject to SLR in reef environments. Further

  18. Habitat Evaluation Procedures (HEP) Report; Iskuulpa Wildlife Mitigation and Watershed Project, Technical Report 1998-2003.

    Energy Technology Data Exchange (ETDEWEB)

    Quaempts, Eric

    2003-01-01

    U.S. Fish and Wildlife Service (USFWS) Habitat Evaluation Procedures (HEP) were used to determine the number of habitat units credited to evaluate lands acquired and leased in Eskuulpa Watershed, a Confederated Tribes of the Umatilla Indian Reservation watershed and wildlife mitigation project. The project is designed to partially credit habitat losses incurred by BPA for the construction of the John Day and McNary hydroelectric facilities on the Columbia River. Upland and riparian forest, upland and riparian shrub, and grasslands cover types were included in the evaluation. Indicator species included downy woodpecker (Picuides puhescens), black-capped chickadee (Pams atricopillus), blue grouse (Beadragapus obscurus), great blue heron (Ardea herodias), yellow warbler (Dendroica petschia), mink (Mustela vison), and Western meadowlark (Sturnello neglects). Habitat surveys were conducted in 1998 and 1999 in accordance with published HEP protocols and included 55,500 feet of transects, 678 m2 plots, and 243 one-tenth-acre plots. Between 123.9 and f 0,794.4 acres were evaluated for each indicator species. Derived habitat suitability indices were multiplied by corresponding cover-type acreages to determine the number of habitat units for each species. The total habitat units credited to BPA for the Iskuulpa Watershed Project and its seven indicator species is 4,567.8 habitat units. Factors limiting habitat suitability are related to the direct, indirect, and cumulative effects of past livestock grazing, road construction, and timber harvest, which have simplified the structure, composition, and diversity of native plant communities. Alternatives for protecting and improving habitat suitability include exclusion of livestock grazing or implementation of restoration grazing schemes, road de-commissioning, reforestation, large woody debris additions to floodplains, control of competing and unwanted vegetation, reestablishing displaced or reduced native vegetation species

  19. Daytime habitat selection for juvenile parr brown trout (Salmo trutta) in small lowland streams

    DEFF Research Database (Denmark)

    Conallin, J.; Boegh, E.; Olsen, M.

    2014-01-01

    Physical habitat is important in determining the carrying capacity of juvenile brown trout, and within freshwater management. Summer daytime physical habitat selection for the parr lifestage (7-20 cm) juvenile brown trout (Salmo trutta) was assessed in 6 small lowland streams. Habitat preference...... was determined for the four variables; water velocity, water depth, substrate and cover, and the preferences for physical habitat selection were expressed in terms of habitat suitability indices (HSI's). The statistical confidence of HSI's was evaluated using power analysis. It was found that a minimum of 22...... fish observations was needed to have statistical confidence in the HSIs for water depth, and a minimum of 92 fish observations for water velocity during daytime summer conditions. Generally parr were utilising the deeper habitats, indicating preference for deeper water. Cover was also being selected...

  20. Redd site selection and spawning habitat use by fall chinook salmon: The importance of geomorphic features in large rivers

    International Nuclear Information System (INIS)

    Geist, D.R.; Oregon State Univ., Corvallis, OR; Dauble, D.D.

    1998-01-01

    Knowledge of the three-dimensional connectivity between rivers and groundwater within the hyporheic zone can be used to improve the definition of fall chinook salmon (Oncorhynchus tshawytscha) spawning habitat. Information exists on the microhabitat characteristics that define suitable salmon spawning habitat. However, traditional spawning habitat models that use these characteristics to predict available spawning habitat are restricted because they can not account for the heterogeneous nature of rivers. The authors present a conceptual spawning habitat model for fall chinook salmon that describes how geomorphic features of river channels create hydraulic processes, including hyporheic flows, that influence where salmon spawn in unconstrained reaches of large mainstem alluvial rivers. Two case studies based on empirical data from fall chinook salmon spawning areas in the Hanford Reach of the Columbia River are presented to illustrate important aspects of the conceptual model. The authors suggest that traditional habitat models and the conceptual model be combined to predict the limits of suitable fall chinook salmon spawning habitat. This approach can incorporate quantitative measures of river channel morphology, including general descriptors of geomorphic features at different spatial scales, in order to understand the processes influencing redd site selection and spawning habitat use. This information is needed in order to protect existing salmon spawning habitat in large rivers, as well as to recover habitat already lost

  1. Oil sands terrestrial habitat and risk modeling for disturbance and reclamation - Phase I report

    Energy Technology Data Exchange (ETDEWEB)

    Welham, C. [FORRx Consulting Inc., Belcarra, BC (Canada)

    2010-11-15

    The main purpose of this study is to build a framework that includes risk management and strategic decision-making to assess the impact of natural and industrial disturbance on ecosystem products and services and on the existence of habitat for terrestrial species in Alberta's Lower Athabasca planning region. This will include an evaluation of the impact of disturbance, conservation and reclamation activities associated with oil sands development both at the lease and regional levels. The basecase scenario, established in Phase I, includes a dendrochronology study of the link between climate and tree growth in the sub boreal region that comprises oil sands mining, an analysis of habitat availability for 10 wildlife species compared with reclamation activities on the Kearl Lake mine, and an examination of the potential for development of high levels of water stress in recent reclamation plantations at the Kearl Lake mine. Four tree species of the subboreal forests of Alberta and Saskatchewan were considered for the dendrochronology study: the white spruce or Picea glauca, the black spruce or Picea mariana, the jack pine or Pinus banksiana, and the trembling aspen or Populus tremuloides. This study shows that the water stress observed during the year has restricted the radial growth of white spruce and a link has been established between radial growth and increasing season precipitation and summer temperatures. The purposes of the habitat suitability analysis were to list habitats suitability models that could be applied to Alberta boreal forests, distinguish the parameters used in those models that can be simulated with an ecosystem simulation model, simulate the reclamation prescriptions detailed in the Kearl Lake EIA documents with the ecosystem simulation model and generate output suitable for populating each habitat suitability model. The establishment of ecologically viable reclamation plans in the oil sands region can be hard to manage regarding the

  2. Integrating environmental variables and geospatial technologies in landscape scale habitat modelling of edible stink bugs in Zimbabwe

    Science.gov (United States)

    Masocha, Mhosisi; Dube, Timothy; Maziva, Tendai

    2018-06-01

    Encosternum delegorguei spinola (edible stink bugs) is renowned for its high protein and contribution to the local economies of the people in Africa. Although many studies have evaluated the economic and nutritional importance of E. delegorguei, little is known about its geographic distribution and habitat yet the insects are an important source of protein and money for many people in Southern Africa. In this study maximum entropy model was used to predict the probability of presence of E. delegorguei in southern Zimbabwe. The environmental factors governing its geographic distribution in Zimbabwe were also evaluated. Presence/absence data were selected along thirty-five randomly selected transects. The climatic and topographic variables used to predict the distribution of E. delegorguei were: maximum temperature of the warmest month; minimum temperature of the coldest month; the normalised difference vegetation index (NDVI); altitude; slope; and aspect. It was found that E. delegorguei is most likely to occur on steep slopes with high NDVI located at an altitude ranging of 856 and 1450 m above sea level. These suitable habitats are characterised by mild temperatures ranging from 17 °C to 28 °C. These results are in agreement with previous studies indicating that E. delegorguei is sensitive to temperature, as well as tree cover and may contribute towards conserving its habitat, which is being fragmented by anthropogenic disturbance.

  3. Identifying Areas Suitable for the Occurrence of Rift Valley Fever in North Africa: Implications for Surveillance.

    Science.gov (United States)

    Arsevska, E; Hellal, J; Mejri, S; Hammami, S; Marianneau, P; Calavas, D; Hénaux, V

    2016-12-01

    Rift Valley fever (RVF) is a vector-borne zoonotic disease that has caused widespread outbreaks throughout Africa and the Arabian Peninsula, with serious consequences for livestock-based economies and public health. Although there have never been any reports of RVF in Morocco, Algeria, Tunisia and Libya, it is a priority disease in the Maghreb, due to the threat of introduction of the virus through transboundary livestock movements or infected mosquito vectors. However, the implementation of surveillance activities and early warning contingency plans requires better knowledge of the epidemiological situation. We conducted a multicriteria decision analysis, integrating host distribution with a combination of important ecological factors that drive mosquito abundance, to identify hotspots and suitable time periods for RVF enzootic circulation (i.e. stable transmission at a low to moderate level for an extended period of time) and an RVF epizootic event (i.e. a sudden occurrence of a large number of infected animals over a large geographic area) in the Maghreb. We also modelled vector species distribution using available information on vector presence and habitat preference. We found that the northern regions of the Maghreb were moderately suitable for RVF enzootics, but highly suitable for RVF epizootics. The vector species distribution model identified these regions as the most favourable mosquito habitats. Due to the low density of animal hosts and arid conditions, the desert region showed low RVF suitability, except in oases. However, the presence of competent vectors in putative unsuitable areas underlines the need for further assessments of mosquito habitat preference. This study produced monthly RVF suitability maps useful for animal health managers and veterinary services involved in designing risk-based surveillance programmes. The suitability maps can be further enhanced using existing country-specific sources of information and by incorporating knowledge

  4. Quantity and configuration of available elephant habitat and related conservation concerns in the Lower Kinabatangan floodplain of Sabah, Malaysia.

    Directory of Open Access Journals (Sweden)

    Jason G Estes

    Full Text Available The approximately 300 (298, 95% CI: 152-581 elephants in the Lower Kinabatangan Managed Elephant Range in Sabah, Malaysian Borneo are a priority sub-population for Borneo's total elephant population (2,040, 95% CI: 1,184-3,652. Habitat loss and human-elephant conflict are recognized as the major threats to Bornean elephant survival. In the Kinabatangan region, human settlements and agricultural development for oil palm drive an intense fragmentation process. Electric fences guard against elephant crop raiding but also remove access to suitable habitat patches. We conducted expert opinion-based least-cost analyses, to model the quantity and configuration of available suitable elephant habitat in the Lower Kinabatangan, and called this the Elephant Habitat Linkage. At 184 km(2, our estimate of available habitat is 54% smaller than the estimate used in the State's Elephant Action Plan for the Lower Kinabatangan Managed Elephant Range (400 km(2. During high flood levels, available habitat is reduced to only 61 km(2. As a consequence, short-term elephant densities are likely to surge during floods to 4.83 km(-2 (95% CI: 2.46-9.41, among the highest estimated for forest-dwelling elephants in Asia or Africa. During severe floods, the configuration of remaining elephant habitat and the surge in elephant density may put two villages at elevated risk of human-elephant conflict. Lower Kinabatangan elephants are vulnerable to the natural disturbance regime of the river due to their limited dispersal options. Twenty bottlenecks less than one km wide throughout the Elephant Habitat Linkage, have the potential to further reduce access to suitable habitat. Rebuilding landscape connectivity to isolated habitat patches and to the North Kinabatangan Managed Elephant Range (less than 35 km inland are conservation priorities that would increase the quantity of available habitat, and may work as a mechanism to allow population release, lower elephant density, reduce

  5. Global screening for Critical Habitat in the terrestrial realm.

    Science.gov (United States)

    Brauneder, Kerstin M; Montes, Chloe; Blyth, Simon; Bennun, Leon; Butchart, Stuart H M; Hoffmann, Michael; Burgess, Neil D; Cuttelod, Annabelle; Jones, Matt I; Kapos, Val; Pilgrim, John; Tolley, Melissa J; Underwood, Emma C; Weatherdon, Lauren V; Brooks, Sharon E

    2018-01-01

    Critical Habitat has become an increasingly important concept used by the finance sector and businesses to identify areas of high biodiversity value. The International Finance Corporation (IFC) defines Critical Habitat in their highly influential Performance Standard 6 (PS6), requiring projects in Critical Habitat to achieve a net gain of biodiversity. Here we present a global screening layer of Critical Habitat in the terrestrial realm, derived from global spatial datasets covering the distributions of 12 biodiversity features aligned with guidance provided by the IFC. Each biodiversity feature is categorised as 'likely' or 'potential' Critical Habitat based on: 1. Alignment between the biodiversity feature and the IFC Critical Habitat definition; and 2. Suitability of the spatial resolution for indicating a feature's presence on the ground. Following the initial screening process, Critical Habitat must then be assessed in-situ by a qualified assessor. This analysis indicates that a total of 10% and 5% of the global terrestrial environment can be considered as likely and potential Critical Habitat, respectively, while the remaining 85% did not overlap with any of the biodiversity features assessed and was classified as 'unknown'. Likely Critical Habitat was determined principally by the occurrence of Key Biodiversity Areas and Protected Areas. Potential Critical Habitat was predominantly characterised by data representing highly threatened and unique ecosystems such as ever-wet tropical forests and tropical dry forests. The areas we identified as likely or potential Critical Habitat are based on the best available global-scale data for the terrestrial realm that is aligned with IFC's Critical Habitat definition. Our results can help businesses screen potential development sites at the early project stage based on a range of biodiversity features. However, the study also demonstrates several important data gaps and highlights the need to incorporate new and

  6. Spatially explicit measures of production of young alewives in Lake Michigan: Linkage between essential fish habitat and recruitment

    Science.gov (United States)

    Hook, Tomas O.; Rutherford, Edward S.; Brines, Shannon J.; Mason, Doran M.; Schwab, David J.; McCormick, Michael; Desorcie, Timothy J.

    2003-01-01

    The identification and protection of essential habitats for early life stages of fishes are necessary to sustain fish stocks. Essential fish habitat for early life stages may be defined as areas where fish densities, growth, survival, or production rates are relatively high. To identify critical habitats for young-of-year (YOY) alewives (Alosa pseud oharengus) in Lake Michigan, we integrated bioenergetics models with GIS (Geographic Information Systems) to generate spatially explicit estimates of potential population production (an index of habitat quality). These estimates were based upon YOY alewife bioenergetic growth rate potential and their salmonine predators’ consumptive demand. We compared estimates of potential population production to YOY alewife yield (an index of habitat importance). Our analysis suggested that during 1994–1995, YOY alewife habitat quality and yield varied widely throughout Lake Michigan. Spatial patterns of alewife yield were not significantly correlated to habitat quality. Various mechanisms (e.g., predator migrations, lake circulation patterns, alternative strategies) may preclude YOY alewives from concentrating in areas of high habitat quality in Lake Michigan.

  7. Suitability Evaluation of River Bank Filtration along the Second Songhua River, China

    Directory of Open Access Journals (Sweden)

    Lixue Wang

    2016-04-01

    Full Text Available The Second Songhua River is the biggest river system in Jilin Province, China. In recent years, the rapid economic development in this area has increased the prominence of water resources and water-related environmental problems; these include surface water pollution and the overexploitation of groundwater resources. Bank infiltration on the floodplains of the Second Songhua River is an important process of groundwater-surface water exchange under exploitation conditions. Understanding this process can help in the development of water resource management plans and strategies for the region. In this research, a multi-criteria evaluation index system was developed with which to evaluate the suitability of bank filtration along the Second Songhua River. The system was comprised of main suitability indexes for water quantity, water quality, the interaction intensity between surface water and groundwater, and the exploitation condition of groundwater resources. The index system was integrated into GIS (Geographic Information System to complete the evaluation of the various indicators. According to the weighted sum of each index, the suitability of river bank filtration (RBF in the study area was divided into five grades. Although the evaluation index system and evaluation method are applicable only to the Second Songhua River basin, the underlying principle and techniques it embodies can be applied elsewhere. For future generalization of the evaluation index system, the specific evaluation index and its scoring criteria should be modified appropriately based on local conditions.

  8. Climate change expands the spatial extent and duration of preferred thermal habitat for lake Superior fishes.

    Directory of Open Access Journals (Sweden)

    Timothy J Cline

    Full Text Available Climate change is expected to alter species distributions and habitat suitability across the globe. Understanding these shifting distributions is critical for adaptive resource management. The role of temperature in fish habitat and energetics is well established and can be used to evaluate climate change effects on habitat distributions and food web interactions. Lake Superior water temperatures are rising rapidly in response to climate change and this is likely influencing species distributions and interactions. We use a three-dimensional hydrodynamic model that captures temperature changes in Lake Superior over the last 3 decades to investigate shifts in habitat size and duration of preferred temperatures for four different fishes. We evaluated habitat changes in two native lake trout (Salvelinus namaycush ecotypes, siscowet and lean lake trout, Chinook salmon (Oncorhynchus tshawytscha, and walleye (Sander vitreus. Between 1979 and 2006, days with available preferred thermal habitat increased at a mean rate of 6, 7, and 5 days per decade for lean lake trout, Chinook salmon, and walleye, respectively. Siscowet lake trout lost 3 days per decade. Consequently, preferred habitat spatial extents increased at a rate of 579, 495 and 419 km(2 per year for the lean lake trout, Chinook salmon, and walleye while siscowet lost 161 km(2 per year during the modeled period. Habitat increases could lead to increased growth and production for three of the four fishes. Consequently, greater habitat overlap may intensify interguild competition and food web interactions. Loss of cold-water habitat for siscowet, having the coldest thermal preference, could forecast potential changes from continued warming. Additionally, continued warming may render more suitable conditions for some invasive species.

  9. An Index to Measure Effects of a Declining Area of Set-aside Land on Habitat-connectivity in Denmark

    DEFF Research Database (Denmark)

    Levin, Gregor

    2009-01-01

    In Denmark, agriculture occupies 28,000 km² or 65% of the land. As a consequence, habitats for wild species are mainly characterized by small patches, surrounded by intensive agriculture. Due to extensive agricultural management, set-aside land can spatially connect habitats and thus positively...... affect habitat connectivity, which is of importance to the survival of wild species. In 2008 set-aside schemes were abolished, leading to a considerable re-cultivation of former set-aside land and consequently to a decline in the area of set-aside land from 6% of all agricultural land in 2007 to 3...... to natural habitats, would typically not be re-cultivated. I developed an indicator aiming to measure the effect of the reduced area of set-aside land on habitat-connectivity. For a raster-map with a resolution of 25x25 meters, the indicator combines the distance to habitats with the area percentage of set...

  10. Sensitivity analysis of land unit suitability for conservation using a knowledge-based system.

    Science.gov (United States)

    Humphries, Hope C; Bourgeron, Patrick S; Reynolds, Keith M

    2010-08-01

    The availability of spatially continuous data layers can have a strong impact on selection of land units for conservation purposes. The suitability of ecological conditions for sustaining the targets of conservation is an important consideration in evaluating candidate conservation sites. We constructed two fuzzy logic-based knowledge bases to determine the conservation suitability of land units in the interior Columbia River basin using NetWeaver software in the Ecosystem Management Decision Support application framework. Our objective was to assess the sensitivity of suitability ratings, derived from evaluating the knowledge bases, to fuzzy logic function parameters and to the removal of data layers (land use condition, road density, disturbance regime change index, vegetation change index, land unit size, cover type size, and cover type change index). The amount and geographic distribution of suitable land polygons was most strongly altered by the removal of land use condition, road density, and land polygon size. Removal of land use condition changed suitability primarily on private or intensively-used public land. Removal of either road density or land polygon size most strongly affected suitability on higher-elevation US Forest Service land containing small-area biophysical environments. Data layers with the greatest influence differed in rank between the two knowledge bases. Our results reinforce the importance of including both biophysical and socio-economic attributes to determine the suitability of land units for conservation. The sensitivity tests provided information about knowledge base structuring and parameterization as well as prioritization for future data needs.

  11. [Cultural regionalization for Notopterygium incisum based on 3S technology platform. I. Evaluation for growth suitability for N. incisum based on ecological factors analysis by Maxent and ArcGIS model].

    Science.gov (United States)

    Sun, Hong-bing; Sun, Hui; Jiang, Shun-yuan; Zhou, Yi; Cao, Wen-long; Ji, Ming-chang; Zhy, Wen-tao; Yan, Han-jing

    2015-03-01

    Growth suitability as assessment indicators for medicinal plants cultivation was proposed based on chemical quality determination and ecological factors analysis by Maxent and ArcGIS model. Notopterygium incisum, an endangered Chinese medicinal plant, was analyzed as a case, its potential distribution areas at different suitability grade and regionalization map were formulated based on growth suitability theory. The results showed that the most suitable habitats is Sichuan province, and more than 60% of the most suitable areawas located in the western Sichuan such as Aba and Ganzi prefectures for N. incisum. The results indicated that habitat altitude, average air temperature in September, and vegetation types were the dominant factors contributing to the grade of plant growth, precipitation and slope were the major factors contributing to notopterol accumulation in its underground parts, while isoimperatorin in its underground parts was negatively corelated with precipitation and slope of its habitat. However, slope as a factor influencing chemical components seemed to be a pseudo corelationship. Therefore, there were distinguishing differences between growth suitability and quality suitability for medicinal plants, which was helpful to further research and practice of cultivation regionalization, wild resource monitoring and large-scale cultivation of traditional Chinese medicine plants.

  12. Remote sensing depth invariant index parameters in shallow benthic habitats for bottom type classification.

    Science.gov (United States)

    Gapper, J.; El-Askary, H. M.; Linstead, E.

    2017-12-01

    Ground cover prediction of benthic habitats using remote sensing imagery requires substantial feature engineering. Artifacts that confound the ground cover characteristics must be severely reduced or eliminated while the distinguishing features must be exposed. In particular, the impact of wavelength attenuation in the water column means that a machine learning algorithm will primarily detect depth. However, the per pixel depths are difficult to know on a grand scale. Previous research has taken an in situ approach to applying depth invariant index on a small area of interest within a Landsat 8 scene. We aim to abstract this process for application to entire Landsat scene as well as other locations in order to study change detection in shallow benthic zones on a global scale. We have developed a methodology and applied it to more than 25 different Landsat 8 scenes. The images were first preprocessed to mask land, clouds, and other distortions then atmospheric correction via dark pixel subtraction was applied. Finally, depth invariant indices were calculated for each location and associated parameters recorded. Findings showed how robust the resulting parameters (deep-water radiance, depth invariant constant, band radiance variance/covariance, and ratio of attenuation) were across all scenes. We then created false color composite images of the depth invariant indices for each location. We noted several artifacts within some sites in the form of patterns or striations that did not appear to be aligned with variations in subsurface ground cover types. Further research into depth surveys for these sites revealed depths consistent with one or more wavelengths fully attenuating. This result showed that our model framework is generalizing well but limited to the penetration depths due to wavelength attenuation. Finally, we compared the parameters associated with the depth invariant calculation which were consistent across most scenes and explained any outliers observed

  13. Wetlands & Deepwater Habitats - MO 2012 East West Gateway Wetlands (SHP)

    Data.gov (United States)

    NSGIC State | GIS Inventory — Cowardin’s Classification of Wetlands and Deep Water Habitats of the United States (http://www.npwrc.usgs.gov/resource/wetlands/classwet/index.htm), together with...

  14. Relevance of multiple spatial scales in habitat models: A case study with amphibians and grasshoppers

    Science.gov (United States)

    Altmoos, Michael; Henle, Klaus

    2010-11-01

    Habitat models for animal species are important tools in conservation planning. We assessed the need to consider several scales in a case study for three amphibian and two grasshopper species in the post-mining landscapes near Leipzig (Germany). The two species groups were selected because habitat analyses for grasshoppers are usually conducted on one scale only whereas amphibians are thought to depend on more than one spatial scale. First, we analysed how the preference to single habitat variables changed across nested scales. Most environmental variables were only significant for a habitat model on one or two scales, with the smallest scale being particularly important. On larger scales, other variables became significant, which cannot be recognized on lower scales. Similar preferences across scales occurred in only 13 out of 79 cases and in 3 out of 79 cases the preference and avoidance for the same variable were even reversed among scales. Second, we developed habitat models by using a logistic regression on every scale and for all combinations of scales and analysed how the quality of habitat models changed with the scales considered. To achieve a sufficient accuracy of the habitat models with a minimum number of variables, at least two scales were required for all species except for Bufo viridis, for which a single scale, the microscale, was sufficient. Only for the European tree frog ( Hyla arborea), at least three scales were required. The results indicate that the quality of habitat models increases with the number of surveyed variables and with the number of scales, but costs increase too. Searching for simplifications in multi-scaled habitat models, we suggest that 2 or 3 scales should be a suitable trade-off, when attempting to define a suitable microscale.

  15. Habitat suitability of Anopheles vector species and association with human malaria in the Atlantic Forest in south-eastern Brazil.

    Science.gov (United States)

    Laporta, Gabriel Zorello; Ramos, Daniel Garkauskas; Ribeiro, Milton Cezar; Sallum, Maria Anice Mureb

    2011-08-01

    Every year, autochthonous cases of Plasmodium vivax malaria occur in low-endemicity areas of Vale do Ribeira in the south-eastern part of the Atlantic Forest, state of São Paulo, where Anopheles cruzii and Anopheles bellator are considered the primary vectors. However, other species in the subgenus Nyssorhynchus of Anopheles (e.g., Anopheles marajoara) are abundant and may participate in the dynamics of malarial transmission in that region. The objectives of the present study were to assess the spatial distribution of An. cruzii, An. bellator and An. marajoara and to associate the presence of these species with malaria cases in the municipalities of the Vale do Ribeira. Potential habitat suitability modelling was applied to determine both the spatial distribution of An. cruzii, An. bellator and An. marajoara and to establish the density of each species. Poisson regression was utilized to associate malaria cases with estimated vector densities. As a result, An. cruzii was correlated with the forested slopes of the Serra do Mar, An. bellator with the coastal plain and An. marajoara with the deforested areas. Moreover, both An. marajoara and An. cruzii were positively associated with malaria cases. Considering that An. marajoara was demonstrated to be a primary vector of human Plasmodium in the rural areas of the state of Amapá, more attention should be given to the species in the deforested areas of the Atlantic Forest, where it might be a secondary vector.

  16. Interfacing models of wildlife habitat and human development to predict the future distribution of puma habitat

    Science.gov (United States)

    Burdett, Christopher L.; Crooks, Kevin R.; Theobald, David M.; Wilson, Kenneth R.; Boydston, Erin E.; Lyren, Lisa A.; Fisher, Robert N.; Vickers, T. Winston; Morrison, Scott A.; Boyce, Walter M.

    2010-01-01

    urban by 2030, and 35% of suitable puma habitat on private land in 1970 will have been lost by 2030. These land-use changes will further isolate puma populations in southern California, but the ability to visualize these changes had provided a new tool for developing proactive conservation solutions.

  17. Identifying Pelagic Habitat Hotspots of Neon Flying Squid in the Temperate Waters of the Central North Pacific.

    Science.gov (United States)

    Alabia, Irene D; Saitoh, Sei-Ichi; Mugo, Robinson; Igarashi, Hiromichi; Ishikawa, Yoichi; Usui, Norihisa; Kamachi, Masafumi; Awaji, Toshiyuki; Seito, Masaki

    2015-01-01

    We identified the pelagic habitat hotspots of the neon flying squid (Ommastrephes bartramii) in the central North Pacific from May to July and characterized the spatial patterns of squid aggregations in relation to oceanographic features such as mesoscale oceanic eddies and the Transition Zone Chlorophyll-a Front (TZCF). The data used for the habitat model construction and analyses were squid fishery information, remotely-sensed and numerical model-derived environmental data from May to July 1999-2010. Squid habitat hotspots were deduced from the monthly Maximum Entropy (MaxEnt) models and were identified as regions of persistent high suitable habitat across the 12-year period. The distribution of predicted squid habitat hotspots in central North Pacific revealed interesting spatial and temporal patterns likely linked with the presence and dynamics of oceanographic features in squid's putative foraging grounds from late spring to summer. From May to June, the inferred patches of squid habitat hotspots developed within the Kuroshio-Oyashio transition zone (KOTZ; 37-40°N) and further expanded north towards the subarctic frontal zone (SAFZ; 40-44°N) in July. The squid habitat hotspots within the KOTZ and areas west of the dateline (160°W-180°) were likely influenced and associated with the highly dynamic and transient oceanic eddies and could possibly account for lower squid suitable habitat persistence obtained from these regions. However, predicted squid habitat hotspots located in regions east of the dateline (180°-160°W) from June to July, showed predominantly higher squid habitat persistence presumably due to their proximity to the mean position of the seasonally-shifting TZCF and consequent utilization of the highly productive waters of the SAFZ.

  18. The importance of historical land use in the maintenance of early successional habitat for a threatened rattlesnake

    Directory of Open Access Journals (Sweden)

    Eric M. McCluskey

    2018-01-01

    Full Text Available Understanding how historic habitat changes have impacted species and searching the past for clues to better understand the current plight of threatened species can help inform and improve future conservation efforts. We coupled species distribution modeling with historical imagery analysis to assess how changes in land use/land cover have influenced the distribution of eastern massasauga rattlesnake (Sistrurus catenatus, a federally threatened species, and its habitat in northeastern Ohio over the past ∼75 years. We also examined land use/land cover changes throughout southern Michigan for a broader perspective on the influence of historical processes on contemporary habitat. There was a pronounced shift in northeastern Ohio land cover from 1938 to 2011 with forest cover becoming the predominant land cover type as agricultural fields were abandoned and succession occurred. Most known eastern massasauga locations in the area were at some point used for agriculture and higher habitat suitability values were associated with agricultural fields that were eventually abandoned. We observed more stable habitat conditions across southern Michigan populations indicating agricultural abandonment was not as necessary for habitat creation in this part of their range. We present a new approach for linking historical landscapes to present day habitat suitability models; permitting inferences on how prior land use/land cover states have influenced the current distribution of species and their habitats. We demonstrate how agricultural abandonment was an important source of early successional habitat for a species that requires an open canopy, a finding applicable to a broad array of species with similar habitat requirements. Keywords: Eastern massasauga, Agriculture, Aerial photography, Maxent

  19. Distribution and habitat use of red panda in the Chitwan-Annapurna Landscape of Nepal.

    Science.gov (United States)

    Bista, Damber; Shrestha, Saroj; Sherpa, Peema; Thapa, Gokarna Jung; Kokh, Manish; Lama, Sonam Tashi; Khanal, Kapil; Thapa, Arjun; Jnawali, Shant Raj

    2017-01-01

    In Nepal, the red panda (Ailurus fulgens) has been sparsely studied, although its range covers a wide area. The present study was carried out in the previously untapped Chitwan-Annapurna Landscape (CHAL) situated in central Nepal with an aim to explore current distributional status and identify key habitat use. Extensive field surveys conducted in 10 red panda range districts were used to estimate species distribution by presence-absence occupancy modeling and to predict distribution by presence-only modeling. The presence of red pandas was recorded in five districts: Rasuwa, Nuwakot, Myagdi, Baglung and Dhading. The predictive distribution model indicated that 1,904.44 km2 of potential red panda habitat is available in CHAL with the protected area covering nearly 41% of the total habitat. The habitat suitability analysis based on the probability of occurrence showed only 16.58% (A = 315.81 km2) of the total potential habitat is highly suitable. Red Panda occupancy was estimated to be around 0.0667, indicating nearly 7% (218 km2) of the total habitat is occupied with an average detection probability of 0.4482±0.377. Based on the habitat use analysis, altogether eight variables including elevation, slope, aspect, proximity to water sources, bamboo abundance, height, cover, and seasonal precipitation were observed to have significant roles in the distribution of red pandas. In addition, 25 tree species were documented from red panda sign plots out of 165 species recorded in the survey area. Most common was Betula utilis followed by Rhododendron spp. and Abies spectabilis. The extirpation of red pandas in previously reported areas indicates a need for immediate action for the long-term conservation of this species in CHAL.

  20. Geographic distribution of habitat, development, and population growth rates of the Asian citrus psyllid, Diaphorina citri, in Mexico.

    Science.gov (United States)

    López-Collado, José; Isabel López-Arroyo, J; Robles-García, Pedro L; Márquez-Santos, Magdalena

    2013-01-01

    The Asian citrus psyllid, Diaphorina citri Kuwayama (Hemiptera: Psyllidae), is an introduced pest in Mexico and a vector of huanglongbing, a lethal citrus disease. Estimations of the habitat distribution and population growth rates of D. citri are required to establish regional and areawide management strategies and can be used as a pest risk analysis tools. In this study, the habitat distribution of D. citri in Mexico was computed with MaxEnt, an inductive, machine-learning program that uses bioclimatic layers and point location data. Geographic distributions of development and population growth rates were determined by fitting a temperature-dependent, nonlinear model and projecting the rates over the target area, using the annual mean temperature as the predictor variable. The results showed that the most suitable regions for habitat of D. citri comprise the Gulf of Mexico states, Yucatán Peninsula, and areas scattered throughout the Pacific coastal states. Less suitable areas occurred in northern and central states. The most important predictor variables were related to temperature. Development and growth rates had a distribution wider than habitat, reaching some of the northern states of México. Habitat, development, and population growth rates were correlated to each other and with the citrus producing area. These relationships indicated that citrus producing states are within the most suitable regions for the occurrence, development, and population growth of D. citri, therefore increasing the risk of huanglongbing dispersion.

  1. Investigating Targets of Avian Habitat Management to Eliminate an Ecological Trap

    Directory of Open Access Journals (Sweden)

    Bruce A. Robertson

    2012-12-01

    trees. Both sexes preferred standing dead perch trees (snags and these preferences were most obvious in harvested forest where snags are rarer. Because previous research shows that snag density is linked to habitat preference and spruce/fir trees are preferred nest substrate, my results suggest these two habitat components are focal habitat selection cues. I suggest alternative and complementary strategies for eliminating the ecological trap for Olive-sided Flycatchers including: (1 reduced retention and creation of snags, (2 avoiding selective harvest in spruce, fir, and larch stands, (3 avoiding retention of these tree species, and (4 selecting only even-aged canopy height trees for retention so as to reduce perch availability for female flycatchers. Because these strategies also have potential to negatively impact habitat suitability for other forest species or even create new ecological traps, we urge caution in the application of our management recommendations.

  2. Using forest inventory and analysis data and the forest vegetation simulator to predict and monitor fisher (Martes pennanti) resting habitat suitability

    Science.gov (United States)

    William J. Zielinski; Andrew N. Gray; Jeffrey R. Dunk; Joseph W. Sherlock; Gary E. Dixon

    2010-01-01

    New knowledge from wildlife-habitat relationship models is often difficult to implement in a management context. This can occur because researchers do not always consider whether managers have access to information about environmental covariates that permit the models to be applied. Moreover, ecosystem management requires knowledge about the condition of habitats over...

  3. KERAGAMAN MIKOFLORA TANAH PADA HABITAT TANAMAN PISANG DI BALI

    Directory of Open Access Journals (Sweden)

    l MADE SUDARMA

    2015-05-01

    Full Text Available Fungi in the soil plays an important role in maintaining the health and quality ofland, one of several indicators of soil health that is the diversity of soil fungi. This study was done in order to know the soil fungi diversity in the soil of banana plants habitat. The soil samples were collected from three regencies in Bali, i.e. Karangasem, Klungkung and Jembrana which are the main banana growing areas in Bali. Soil sampling was done in two sites in each regency, by collecting 100 grams of soil surrounding the banana plant at the depth of 20 cm, with three replication. Soil microbes population density particularly for bacteria, fungi and actinomycetes were determined based on plate account technique, while the microbes diversity was determined based on Diversity Index of Shannon-Wiener. Diversity index of soil fungi of all soil samples ranged from 0.8785 to 2.1458 (criteria oflow to moderate, with population densities ranging from 1.1 x 104 to 2.8 x 104 cfu / g soil. Evenness index at all sites soil samples obtained ranged from 0.6688 to 0.9766, this means the fungus species found there are no outstanding domination. Similarity index on all soil samples showed less than 0.5, which means one does not have a kinship with each other. Physicochemical factors that affect population density of soil fungi on the banana plant habitats: organic C, total N, available P, available K, soil moisture content (air dry capacity and field capacity, sand and clay. W hile soil physicochemical factors that influence the number of species (diversity of soil fungi namely: C-organic content, total N and the dust has positive influence on the number of species in banana plants habitat, whereas soil sand content negatively affected the number of types of soil fungi.

  4. Home-range use patterns and movements of the Siberian flying squirrel in urban forests: Effects of habitat composition and connectivity

    NARCIS (Netherlands)

    Mäkeläinen, Sanna; Knegt, de H.J.; Ovaskainen, Otso; Hanski, Ilpo K.

    2016-01-01

    Urbanization causes modification, fragmentation and loss of native habitats. Such landscape changes threaten many arboreal and gliding mammals by limiting their movements through treeless parts of a landscape and by making the landscape surrounding suitable habitat patches more inhospitable. Here,

  5. KEANEKARAGAMAN JENIS BURUNG PADA BERBAGAI TIPE HABITAT BESERTA GANGGUANNYA DI HUTAN PENELITIAN DRAMAGA, BOGOR, JAWA BARAT

    Directory of Open Access Journals (Sweden)

    Asep Saefullah

    2016-01-01

    Full Text Available Dramaga Research Forest, located in the outskirt of Bogor, provides a good habitat for birds. This research was aimed to study bird diversity, identifying habitat characteristics (around the forest path, along house edge, riparian habitat and the interior area and recorded the activities of the local people around the forest. Point count, MacKinnon list, habitat profiling and interviews were conducted. The highest index of species diversity (Shannon-Wiener index was at interior area (2.34, followed by around the forest path (2.21, along house edge (1.97 and riparian habitat (1.86. The highest species richness was at riparian habitat (27 species, the forest path had 21 species, along house edge had 26 species, while the interior area was a home for 21 bird species. The highest similarity (0.81 was between forest path and interior area. On the activities of the local people, the most often was firewood harvesting. Other activities were hunting for cage birds, harvesting ferns, harvesting wild fruit and harvesting ant larvae. Activity that might disrupt the bird population was hunting. Keywords: Diversity,Dramaga Research Forest, human activities.

  6. Development and assessment of indices to determine stream fish vulnerability to climate change and habitat alteration

    Science.gov (United States)

    Sievert, Nicholas A.; Paukert, Craig P.; Tsang, Yin-Phan; Infante, Dana M.

    2016-01-01

    Understanding the future impacts of climate and land use change are critical for long-term biodiversity conservation. We developed and compared two indices to assess the vulnerability of stream fish in Missouri, USA based on species environmental tolerances, rarity, range size, dispersal ability and on the average connectivity of the streams occupied by each species. These two indices differed in how environmental tolerance was classified (i.e., vulnerability to habitat alteration, changes in stream temperature, and changes to flow regimes). Environmental tolerance was classified based on measured species responses to habitat alteration, and extremes in stream temperatures and flow conditions for one index, while environmental tolerance for the second index was based on species’ traits. The indices were compared to determine if vulnerability scores differed by index or state listing status. We also evaluated the spatial distribution of species classified as vulnerable to habitat alteration, changes in stream temperature, and change in flow regimes. Vulnerability scores were calculated for all 133 species with the trait association index, while only 101 species were evaluated using the species response index, because 32 species lacked data to analyze for a response. Scores from the trait association index were greater than the species response index. This is likely due to the species response index's inability to evaluate many rare species, which generally had high vulnerability scores for the trait association index. The indices were consistent in classifying vulnerability to habitat alteration, but varied in their classification of vulnerability due to increases in stream temperature and alterations to flow regimes, likely because extremes in current climate may not fully capture future conditions and their influence on stream fish communities. Both indices showed higher mean vulnerability scores for listed species than unlisted species, which provided a coarse

  7. Perinatal mortality--a suitable index of health worldwide?

    Science.gov (United States)

    Savage, A

    1986-11-22

    As a result of cultural factors, perinatal mortality may not be the most appropriate measure of health. Comparisons of the health of different countries should not be based on only 1 criterion unless general attitudes are the same. In developed countries, where abortion is widely available, unwanted pregnancies are handled before delivery. In some developing countries in Africa, however, population control may take the form of allowing a newborn to die of starvation, for example. Given this cultural difference, Third World countries rank lowest in perinatal health. It is suggested that mortality and morbidity should be calculated decade by decade before an index is derived. A 20-year old from a developing country, where there is no drug problem and attempted suicide is rare, might receive a higher health rating than his counterpart in developed countries.

  8. Habitat selection by chironomid larvae: fast growth requires fast food.

    NARCIS (Netherlands)

    de Haas, E.M.; Wagner, C.; Koelmans, A.A.; Kraak, M.H.S.; Admiraal, W.

    2006-01-01

    1. Sediments have been considered as a habitat, a cover from predators and a source of food, but also as a source of potential toxic compounds. Therefore, the choice of a suitable substrate is essential for the development of chironomids. 2. For the midge Chironomus riparius (Meigen 1804) the growth

  9. Present and future potential habitat distribution of Carcharhinus falciformis and Canthidermis maculata by-catch species in the tropical tuna purse-seine fishery under climate change

    Directory of Open Access Journals (Sweden)

    Nerea eLezama Ochoa

    2016-03-01

    Full Text Available By-catch species from tropical tuna purse seine fishery have been affected by fishery pressures since the last century; however, the habitat distribution and the climate change impacts on these species are poorly known. With the objective of predicting the potential suitable habitat for a shark (Carcharhinus falciformis and a teleost (Canthidermis maculata in the Indian, Atlantic and Eastern Pacific Oceans, a MaxEnt species distribution model (SDM was developed using data collected by observers in tuna purse seiners. The relative percentage of contribution of some environmental variables (depth, sea surface temperature, salinity and primary production and the potential impact of climate change on species habitat by the end of the century under the A2 scenario (scenario with average concentrations of carbon dioxide of 856 ppm by 2100 were also evaluated. Results showed that by-catch species can be correctly modelled using observed occurrence records and few environmental variables with SDM. Results from projected maps showed that the equatorial band and some coastal upwelling regions were the most suitable areas for both by-catch species in the three oceans in concordance with the main fishing grounds. Sea surface temperature was the most important environmental variable which contributed to explain the habitat distribution of the two species in the three oceans in general. Under climate change scenarios, the largest change in present habitat suitability is observed in the Atlantic Ocean (around 16% of the present habitat suitability area of Carcharhinus falciformis and Canthidermis maculata, respectively whereas the change is less in the Pacific (around 10% and 8% and Indian Oceans (around 3% and 2 %. In some regions such as Somalia, the Atlantic equatorial band or Peru’s coastal upwelling areas, these species could lose potential habitat whereas in the south of the equator in the Indian Ocean, the Benguela System and in the Pacific coast of

  10. The micro-habitat methodology. Application protocols

    Energy Technology Data Exchange (ETDEWEB)

    Sabaton, C; Valentin, S; Souchon, Y

    1995-06-01

    A strong need has been felt for guidelines to help various entities in applying the micro-habitat methodology, particularly in impact studies on hydroelectric installations. CEMAGREF and Electricite de France have developed separately two protocols with five major steps: reconnaissance of the river, selection of representative units to be studied in greater depth, morpho-dynamic measurements at one or more rates of discharge and hydraulic modeling, coupling of hydraulic and biological models, calculation of habitat-quality scores for fish, analysis of results. The two approaches give very comparable results and are essentially differentiated by the hydraulic model used. CEMAGREF uses a one-dimensional model requiring measurements at only one discharge rate. Electricite de France uses a simplified model based on measurements at several rates of discharge. This approach is possible when discharge can be controlled in the study area during data acquisition, as is generally the case downstream of hydroelectric installations. The micro-habitat methodology is now a fully operational tool with which to study changes in fish habitat quality in relation to varying discharge. It provides an element of assessment pertinent to the choice of instreaming flow to be maintained downstream of a hydroelectric installation; this information is essential when the flow characteristics (velocity, depth) and the nature of the river bed are the preponderant factors governing habitat suitability for trout or salmon. The ultimate decision must nonetheless take into account any other potentially limiting factors for the biocenoses on the one hand, and the target water use objectives on the other. In many cases, compromises must be found among different uses, different species and different stages in the fish development cycle. (Abstract Truncated)

  11. Assessing Impacts of Hydropower Regulation on Salmonid Habitat Connectivity to Guide River Restoration

    Science.gov (United States)

    Buddendorf, Bas; Geris, Josie; Malcolm, Iain; Wilkinson, Mark; Soulsby, Chris

    2016-04-01

    Anthropogenic activity in riverine ecosystems has led to a substantial divergence from the natural state of many rivers globally. Many of Scotland's rivers have been regulated for hydropower with increasing intensity since the 1890s. At the same time they sustain substantial populations of Atlantic Salmon (Salmo salar L.), which have a range of requirements in terms of flow and access to habitat, depending on the different life-stages. River barriers for hydropower regulation can change the spatial and temporal connectivity within river networks, the impacts of which on salmon habitat are not fully understood. Insight into such changes in connectivity, and the link with the distribution and accessibility of suitable habitat and areas of high productivity, are essential to aid restoration and/or conservation efforts. This is because they indicate where such efforts might have a higher chance of being successful in terms of providing suitable habitat and increasing river productivity. In this study we applied a graph theory approach to assess historic (natural) and contemporary (regulated) in-stream habitat connectivity of the River Lyon, an important UK salmon river that is moderately regulated for hydropower. Historic maps and GIS techniques were used to construct the two contrasting river networks (i.e., natural vs. regulated). Subsequently, connectivity metrics were used to assess the impacts of hydropower infrastructure on upstream and downstream migration possibilities for adults and juveniles, respectively. A national juvenile salmon production model was used to weight the importance of reaches for juvenile salmon production. Results indicate that the impact of barriers in the Lyon on the connectivity indices depends on the type of barrier and its location within the network, but is generally low for both adults and juveniles, and that compared to the historic river network the reduction in the amount of suitable habitat and juvenile production is most marked

  12. Monitoring Natura 2000 habitats: habitat 92A0 in central Italy as an example

    Directory of Open Access Journals (Sweden)

    Emanuela Carli

    2016-10-01

    Full Text Available The evaluation and the subsequent monitoring of the conservation status of habitats is one of the key steps in nature protection. While some European countries have tested suitable methodologies, others, including Italy, lack procedures tested at the national level. The aim of this work is to propose a method to assess the conservation status of habitat 92A0 (Salix alba and Populus alba galleries in central Italy, and to test the method using data from the Molise region. We selected parameters that highlight the conservation status of the flora and vegetation in order to assess habitat structures and functions at the site level. After selecting the parameters, we tested them on a training dataset of 22 unpublished phytosociological relevés taken from the whole dataset, which consists of 119 relevés (49 unpublished relevés for the study area, and 70 published relevés for central Italy. We detected the most serious conservation problems in the middle and lower course of the Biferno river: the past use of river terraces for agriculture and continual human interventions on the river water flow have drastically reduced the riparian forests of Molise. Our results show that in areas in which forest structure and floristic composition have been substantially modified, certain alien plant species, particularly Robinia pseudoacacia, Amorpha fruticosa and Erigeron canadensis, have spread extensively along rivers. In the management of riparian forests, actions aimed at maintaining the stratification of the forest, its uneven-agedness and tree species richness may help to ensure the conservation status, as well as favour the restoration, of habitat 92A0.

  13. Columbia River wildlife mitigation habitat evaluation procedures report: Scotch Creek Wildlife Area, Berg Brothers, and Douglas County pygmy rabbit projects

    International Nuclear Information System (INIS)

    Ashley, P.R.; Ratassepp, J.; Berger, M.; Judd, S.L.

    1997-01-01

    This Habitat Evaluation Procedure study was conducted to determine baseline habitat units (HUs) on the Scotch Creek, Mineral Hill, Pogue Mountain, Chesaw and Tunk Valley Habitat Areas (collectively known as the Scotch Creek Wildlife Area) in Okanogan County, Sagebrush Flat and the Dormaler property in Douglas County, and the Berg Brothers ranch located in Okanogan County within the Colville Reservation. A HEP team comprised of individuals from the Washington Department of Fish and Wildlife, the Confederated Tribes of the Colville Reservation, and the Natural Resources Conservation Service (Appendix A) conducted baseline habitat surveys using the following HEP evaluation species: mule deer (Odocoileus hemionus), sharp-tailed grouse (Tympanuchus phasianellus), pygmy rabbit (Brachylagus idahoensis), white-tailed deer (Odocoileus virginiana), mink (Mustela vison), Canada goose (Branta canadensis), downy woodpecker (Picoides pubescens), Lewis woodpecker (Melanerpes lewis), and Yellow warbler (Dendroica petechia). Results of the HEP analysis are listed below. General ratings (poor, marginal, fair, etc.,) are described in Appendix B. Mule deer habitat was marginal lacking diversity and quantify of suitable browse species. Sharp-tailed grouse habitat was marginal lacking residual nesting cover and suitable winter habitat Pygmy rabbit habitat was in fair condition except for the Dormaier property which was rated marginal due to excessive shrub canopy closure at some sites. This report is an analysis of baseline habitat conditions on mitigation project lands and provides estimated habitat units for mitigation crediting purposes. In addition, information from this document could be used by wildlife habitat managers to develop management strategies for specific project sites

  14. Columbia River Wildlife Mitigation Habitat Evaluation Procedures Report / Scotch Creek Wildlife Area, Berg Brothers, and Douglas County Pygmy Rabbit Projects.

    Energy Technology Data Exchange (ETDEWEB)

    Ashley, Paul R.

    1997-01-01

    This Habitat Evaluation Procedure study was conducted to determine baseline habitat units (HUs) on the Scotch Creek, Mineral Hill, Pogue Mountain, Chesaw and Tunk Valley Habitat Areas (collectively known as the Scotch Creek Wildlife Area) in Okanogan County, Sagebrush Flat and the Dormaler property in Douglas County, and the Berg Brothers ranch located in Okanogan County within the Colville Reservation. A HEP team comprised of individuals from the Washington Department of Fish and Wildlife, the Confederated Tribes of the Colville Reservation, and the Natural Resources Conservation Service (Appendix A) conducted baseline habitat surveys using the following HEP evaluation species: mule deer (Odocoileus hemionus), sharp-tailed grouse (Tympanuchus phasianellus), pygmy rabbit (Brachylagus idahoensis), white-tailed deer (Odocoileus virginiana), mink (Mustela vison), Canada goose (Branta canadensis), downy woodpecker (Picoides pubescens), Lewis woodpecker (Melanerpes lewis), and Yellow warbler (Dendroica petechia). Results of the HEP analysis are listed below. General ratings (poor, marginal, fair, etc.,) are described in Appendix B. Mule deer habitat was marginal lacking diversity and quantify of suitable browse species. Sharp-tailed grouse habitat was marginal lacking residual nesting cover and suitable winter habitat Pygmy rabbit habitat was in fair condition except for the Dormaier property which was rated marginal due to excessive shrub canopy closure at some sites. This report is an analysis of baseline habitat conditions on mitigation project lands and provides estimated habitat units for mitigation crediting purposes. In addition, information from this document could be used by wildlife habitat managers to develop management strategies for specific project sites.

  15. Influence of whitebark pine decline on fall habitat use and movements of grizzly bears in the Greater Yellowstone Ecosystem

    Science.gov (United States)

    Costello, Cecily M.; van Manen, Frank T.; Haroldson, Mark A.; Ebinger, Michael R.; Cain, Steven L.; Gunther, Kerry A.; Bjornlie, Daniel D.

    2014-01-01

    When abundant, seeds of the high-elevation whitebark pine (WBP; Pinus albicaulis) are an important fall food for grizzly bears (Ursus arctos) in the Greater Yellowstone Ecosystem. Rates of bear mortality and bear/human conflicts have been inversely associated with WBP productivity. Recently, mountain pine beetles (Dendroctonus ponderosae) have killed many cone-producing WBP trees. We used fall (15 August–30 September) Global Positioning System locations from 89 bear years to investigate temporal changes in habitat use and movements during 2000–2011. We calculated Manly–Chesson (MC) indices for selectivity of WBP habitat and secure habitat (≥500 m from roads and human developments), determined dates of WBP use, and documented net daily movement distances and activity radii. To evaluate temporal trends, we used regression, model selection, and candidate model sets consisting of annual WBP production, sex, and year. One-third of sampled grizzly bears had fall ranges with little or no mapped WBP habitat. Most other bears (72%) had a MC index above 0.5, indicating selection for WBP habitats. From 2000 to 2011, mean MC index decreased and median date of WBP use shifted about 1 week later. We detected no trends in movement indices over time. Outside of national parks, there was no correlation between the MC indices for WBP habitat and secure habitat, and most bears (78%) selected for secure habitat. Nonetheless, mean MC index for secure habitat decreased over the study period during years of good WBP productivity. The wide diet breadth and foraging plasticity of grizzly bears likely allowed them to adjust to declining WBP. Bears reduced use of WBP stands without increasing movement rates, suggesting they obtained alternative fall foods within their local surroundings. However, the reduction in mortality risk historically associated with use of secure, high-elevation WBP habitat may be diminishing for bears residing in multiple-use areas.

  16. Influence of whitebark pine decline on fall habitat use and movements of grizzly bears in the Greater Yellowstone Ecosystem.

    Science.gov (United States)

    Costello, Cecily M; van Manen, Frank T; Haroldson, Mark A; Ebinger, Michael R; Cain, Steven L; Gunther, Kerry A; Bjornlie, Daniel D

    2014-05-01

    When abundant, seeds of the high-elevation whitebark pine (WBP; Pinus albicaulis) are an important fall food for grizzly bears (Ursus arctos) in the Greater Yellowstone Ecosystem. Rates of bear mortality and bear/human conflicts have been inversely associated with WBP productivity. Recently, mountain pine beetles (Dendroctonus ponderosae) have killed many cone-producing WBP trees. We used fall (15 August-30 September) Global Positioning System locations from 89 bear years to investigate temporal changes in habitat use and movements during 2000-2011. We calculated Manly-Chesson (MC) indices for selectivity of WBP habitat and secure habitat (≥500 m from roads and human developments), determined dates of WBP use, and documented net daily movement distances and activity radii. To evaluate temporal trends, we used regression, model selection, and candidate model sets consisting of annual WBP production, sex, and year. One-third of sampled grizzly bears had fall ranges with little or no mapped WBP habitat. Most other bears (72%) had a MC index above 0.5, indicating selection for WBP habitats. From 2000 to 2011, mean MC index decreased and median date of WBP use shifted about 1 week later. We detected no trends in movement indices over time. Outside of national parks, there was no correlation between the MC indices for WBP habitat and secure habitat, and most bears (78%) selected for secure habitat. Nonetheless, mean MC index for secure habitat decreased over the study period during years of good WBP productivity. The wide diet breadth and foraging plasticity of grizzly bears likely allowed them to adjust to declining WBP. Bears reduced use of WBP stands without increasing movement rates, suggesting they obtained alternative fall foods within their local surroundings. However, the reduction in mortality risk historically associated with use of secure, high-elevation WBP habitat may be diminishing for bears residing in multiple-use areas.

  17. Clear Creek Watershed Flood Risk Management Habitat Assessments Using Habitat Evaluation Procedures (HEP): Analyses, Results and Documentation

    Science.gov (United States)

    2013-07-01

    Van der Molen , H. F. P. Van den Boogaard, and H. Van der Klis. 2006. Uncertainty analysis of a spatial habitat suitability model and implications...Brooks 1997, Brown et al. 2000, Store and Jokimaki 2003, Shifley et al. 2006, Van der Lee et al. 2006 and others). The Clear Creek study team made the...nature preserves (Brown et al. 2000, Ortigosa et al. 2000, Store and Kangas 2001, Felix et al. 2004, Ray and Burgman 2006, Van der Lee et al. 2006 and

  18. Analyzing the Correlation between Deer Habitat and the Component of the Risk for Lyme Disease in Eastern Ontario, Canada: A GIS-Based Approach

    Directory of Open Access Journals (Sweden)

    Dongmei Chen

    2015-01-01

    Full Text Available Lyme borreliosis, caused by the bacterium, Borrelia burgdorferi, is an emerging vector-borne infectious disease in Canada. According to the Public Health Agency of Canada (PHAC, by the year 2020, 80% of Canadians will live in Lyme endemic areas. An understanding of the association of Ixodes scapularis, the main vector of Lyme disease, with it hosts is a fundamental component in assessing changes in the spatial distribution of human risk for Lyme disease. Through the application of Geographic Information System (GIS mapping methods and spatial analysis techniques, this study examines the population dynamics of the black-legged Lyme tick and its primary host, the white-tailed deer, in eastern Ontario, Canada. By developing a habitat suitability model through a GIS-based multi-criteria decision making (MCDM analysis, the relationship of the deer habitat suitability map was generated and the results were compared with deer harvest data. Tick submission data collected from two public health units between 2006 and 2012 were used to explore the relationship between endemic ticks and deer habitat suitability in eastern Ontario. The positive correlation demonstrated between the deer habitat suitability model and deer harvest data allows us to further analyze the association between deer habitat and black-legged ticks in our study area. Our results revealed that the high tick submission number corresponds with the high suitability. These results are useful for developing management strategies that aim to prevent Lyme from becoming a threat to public health in Canada. Further studies are required to investigate how tick survival, behaviour and seasonal activity may change with projected climate change.

  19. Marine Benthic Habitats and Seabed Suitability Mapping for Potential Ocean Current Energy Siting Offshore Southeast Florida

    Directory of Open Access Journals (Sweden)

    Amanda Mulcan

    2015-05-01

    Full Text Available This study examines the legal framework for ocean current energy policy and regulation to develop a metric for assessing the biological and geological characteristics of a seabed area with respect to the siting of OCE devices, a framework of criteria by which to assess seabed suitability (seabed suitability framework that can facilitate the siting, and implementation of ocean current energy (OCE projects. Seafloor geology and benthic biological data were analyzed in conjunction with seafloor core sample geostatistical interpolation to locate suitable substrates for OCE anchoring. Existing submarine cable pathways were considered to determine pathways for power transmission cables that circumvent biologically sensitive areas. Suitability analysis indicates that areas east of the Miami Terrace and north of recently identified deep-sea coral mounds are the most appropriate for OCE siting due to abundance of sand/sediment substrate, existing underwater cable route access, and minimal biological presence (i.e., little to no benthic communities. Further reconnaissance requires higher resolution maps of geological substrate and benthic community locations to identify specific OCE development locations, classify benthic conditions, and minimize potentially negative OCE environmental impacts.

  20. Presence of Rhodnius ecuadoriensis in sylvatic habitats in the southern highlands (Loja Province) of Ecuador.

    Science.gov (United States)

    Grijalva, M J; Villacis, A G

    2009-05-01

    The main vectors of Chagas disease in Ecuador are Triatoma dimidiata and Rhodnius ecuadoriensis. The latter species occupies domestic and peridomestic habitats, as well as sylvatic ecotopes--particularly associated with Phytelephas aequatorialis palm trees--in the western coastal region of Ecuador. In the southern highlands, however, such palm tree habitats are uncommon, and sylvatic populations of R. ecuadoriensis have not previously been reported to date. This study was carried out in five rural communities in Loja Province in southern Ecuador, where manual triatomine searches were conducted in various sylvatic habitats. A total of 81 squirrel nests (Sciurus stramineus) and > 200 bird nests and other habitats were searched. One hundred three R. ecuadoriensis individuals were found in 11 squirrel nests (infestation index = 13.6%, density = 2 bugs per nest searched, crowding = 9.5 bugs per infested nest, colonization index = 72.7% of infested nests with nymphs). No triatomines were found in bird nests or other sylvatic habitats. The presence of sylvatic R. ecuadoriensis in the southern highlands of Ecuador has important implications for the long-term control of Chagas disease in the region because of the possibility of reinfestation of dwellings after insecticide-based control interventions.

  1. Species diversity and qualitative assessment of ground beetles (Coleoptera: Carabidae) in three riparian habitats.

    Science.gov (United States)

    Michels, G J; Carney, V A; Jones, E N; Pollock, D A

    2010-06-01

    In a 3-yr study involving saltcedar-free, saltcedar-infested, and burned habitats in a riparian area at Lake Meredith, TX, the number of carabid species collected, diversity indices, and indicator species varied significantly among habitats. A 3-yr average of 15, 14, and 24 carabid species were collected from the saltcedar-free, saltcedar-infested, and burned habitats, respectively. Values for species richness, Shannon's and Simpson's diversity indices, and evenness index for pooled data collected from 2005 to 2007 were higher in the burned habitat followed by the saltcedar-free habitat and the saltcedar-infested habitat. Within-year parameters across the three habitats generally followed the pooled data results with some variation. Nonmetric multidimensional scaling analyses clearly indicated groups of carabid species preferred specific habitats. Five species in the burned area had indicator species percentage values >50% (Agonum punctiforme, Agonum texanum, Brachinus alternans, Harpalus pensylvanicus, and Poecilus chalcites). In the saltcedar-infested and saltcedar-free habitats, only one species in each habitat had indicator species percentage values that exceeded 50%: Calathus opaculus and Cicindela punctulata punctulata, respectively.

  2. A direct-gradient multivariate index of biotic condition

    Science.gov (United States)

    Miranda, Leandro E.; Aycock, J.N.; Killgore, K. J.

    2012-01-01

    Multimetric indexes constructed by summing metric scores have been criticized despite many of their merits. A leading criticism is the potential for investigator bias involved in metric selection and scoring. Often there is a large number of competing metrics equally well correlated with environmental stressors, requiring a judgment call by the investigator to select the most suitable metrics to include in the index and how to score them. Data-driven procedures for multimetric index formulation published during the last decade have reduced this limitation, yet apprehension remains. Multivariate approaches that select metrics with statistical algorithms may reduce the level of investigator bias and alleviate a weakness of multimetric indexes. We investigated the suitability of a direct-gradient multivariate procedure to derive an index of biotic condition for fish assemblages in oxbow lakes in the Lower Mississippi Alluvial Valley. Although this multivariate procedure also requires that the investigator identify a set of suitable metrics potentially associated with a set of environmental stressors, it is different from multimetric procedures because it limits investigator judgment in selecting a subset of biotic metrics to include in the index and because it produces metric weights suitable for computation of index scores. The procedure, applied to a sample of 35 competing biotic metrics measured at 50 oxbow lakes distributed over a wide geographical region in the Lower Mississippi Alluvial Valley, selected 11 metrics that adequately indexed the biotic condition of five test lakes. Because the multivariate index includes only metrics that explain the maximum variability in the stressor variables rather than a balanced set of metrics chosen to reflect various fish assemblage attributes, it is fundamentally different from multimetric indexes of biotic integrity with advantages and disadvantages. As such, it provides an alternative to multimetric procedures.

  3. River habitat assessment for ecological restoration of Wei River Basin, China.

    Science.gov (United States)

    Yang, Tao; Wang, Shuo; Li, Xiaoping; Wu, Ting; Li, Li; Chen, Jia

    2018-04-11

    As an important composition component of river ecosystems, river habitats must undergo quality assessment to potentially provide scientific basis for river ecological restoration. Substrate composition, habitat complexity, bank erosion degree, river meandering degree, human activity intensity, vegetation buffer width, water quality, and water condition were determined as indicators for river habitat assessment. The comprehensive habitat quality index (CHQI) was established for the Wei River Basin. In addition, the indicator values were determined on the basis of a field investigation at 12 national hydrological stations distributed across the Wei, Jing, and Beiluo Rivers. The analytic hierarchy process was used to determine the indicator weights and thus distinguish the relative importance of the assessment indicator system. Results indicated that the average CHQIs for the Wei, Jing, and Beiluo Rivers were 0.417, 0.508, and 0.304, respectively. The river habitat quality for the three rivers was well. As for the whole river basin, the river habitat quality for 25% of the cross section was very well, the other 25% was well, and the 50% remaining was in critical state. The river habitat quality of the Jing River was better than that of the Wei and Beiluo Rivers.

  4. Assessing the Effects of Water Right Purchases on Stream Temperatures and Fish Habitat

    Science.gov (United States)

    Elmore, L.; Null, S. E.

    2012-12-01

    Warm stream temperature and low flow conditions are limiting factors for native trout species in Nevada's Walker River. Water rights purchases are being considered to increase instream flow and improve habitat conditions. However, the effect of water rights purchases on stream temperatures and fish habitat have yet to be assessed. Manipulating flow conditions affect stream temperatures by altering water depth, velocity, and thermal mass. This study uses the River Modeling System (RMSv4), an hourly, physically-based hydrodynamic and water quality model, to estimate flows and stream temperatures in the Walker River. The model is developed for two wet years (2010-2011). Study results highlight reaches with cold-water habitat that is suitable for native trout species. Previous research on the Walker River has evaluated instream flow changes with water rights purchases. This study incorporates stream temperatures as a proxy for trout habitat, and thus explicitly incorporates water quality and fish habitat into decision-making regarding water rights purchases. Walker River

  5. Loss and modification of habitat

    Science.gov (United States)

    Lemckert, Francis; Hecnar, Stephen; Pilliod, David S.; Wilkinson, John W.; Heatwole, Harold

    2012-01-01

    Amphibians live in a wide variety of habitats around the world, many of which have been modified or destroyed by human activities. Most species have unique life history characteristics adapted to specific climates, habitats (e.g., lentic, lotic, terrestrial, arboreal, fossorial, amphibious), and local conditions that provide suitable areas for reproduction, development and growth, shelter from environmental extremes, and predation, as well as connectivity to other populations or habitats. Although some species are entirely aquatic or terrestrial, most amphibians, as their name implies, lead a dual life and require a mosaic of habitats in both aquatic and terrestrial ecosystems. With over 6 billion people on Earth, most species are now persisting in habitats that have been directly or indirectly influenced by human activities. Some species have disappeared where their habitats have been completely destroyed, reduced, or rendered unsuitable. Habitat loss and degradation are widely considered by most researchers as the most important causes of amphibian population decline globally (Barinaga 1990; Wake and Morowitz 1991; Alford and Richards 1999). In this chapter, a background on the diverse habitat requirements of amphibians is provided, followed by a discussion of the effects of urbanization, agriculture, livestock grazing, timber production and harvesting, fire and hazardous fuel management, and roads on amphibians and their habitats. Also briefly discussed is the influence on amphibian habitats of natural disturbances, such as extreme weather events and climate change, given the potential for human activities to impact climate in the longer term. For amphibians in general, microhabitats are of greater importance than for other vertebrates. As ectotherms with a skin that is permeable to water and with naked gelatinous eggs, amphibians are physiologically constrained to be active during environmental conditions that provide appropriate body temperatures and adequate

  6. An analysis of mussel bed habitats in the Dutch Wadden Sea

    NARCIS (Netherlands)

    Brinkman, A.G.; Dankers, N.M.J.A.; Stralen, van M.

    2002-01-01

    A habitat suitability analysis for littoral mussel beds in the Dutch Wadden Sea was carried out. The analysis was based on the presence of mussel beds in the years 1960-1970, and a number of environmental characteristics: wave action, flow velocity, median grain size, emersion times and distance to

  7. Shelf spawning habitat of Emmelichthys nitidus in south-eastern Australia - Implications and suitability for egg-based biomass estimation

    Science.gov (United States)

    Neira, Francisco J.; Lyle, Jeremy M.; Keane, John P.

    2009-03-01

    The spawning habitat of Emmelichthys nitidus (Emmelichthyidae) in south-eastern Australia is described from vertical ichthyoplankton samples collected along the shelf region off eastern through to south-western Tasmania during peak spawning in October 2005-06. Surveys covered eastern waters in 2005 (38.8-43.5°S), and both eastern and southern waters in 2006 (40.5°S around to 43.5°S off the south-west). Eggs ( n = 10,393) and larvae ( n = 378) occurred along eastern Tasmania in both years but were rare along southern waters south and westwards of 43.5°S in 2006. Peak egg abundances (1950-2640 per m -2) were obtained off north-eastern Tasmania (40.5-41.5°S) between the shelf break and 2.5 nm inshore from the break. Eggs were up to 5-days old, while nearly 95% of larvae were at the early preflexion stage, i.e. close to newly emerged. Average abundances of aged eggs pooled across each survey declined steadily from day-1 to day-5 eggs both in 2005 (97-18) and 2006 (175-34). Moreover, day-1 egg abundances were significantly greater 2.5 nm at either side of the break, including at the break, than in waters ≥5 nm both inshore and offshore from the break. These results, complemented with egg and larval data obtained in shelf waters off New South Wales (NSW; 35.0-37.7°S) in October 2002-03, indicate that the main spawning area of E. nitidus in south-eastern Australia lies between 35.5°S off southern NSW and 43.5°S off south-eastern Tasmania, and that spawning activity declines abruptly south and westwards of 43.5°S around to the south-west coast. In addition, quotient analyses of day-1 egg abundances point to a preferred spawning habitat contained predominantly within a 5 nm corridor along the shelf break, where waters are 125-325 m deep and median temperatures 13.5-14.0 °C. Spawning off eastern Tasmania is timed with the productivity outburst typical of the region during the austral spring, and the temperature increase from the mixing between the southwards

  8. GIS-based approach for quantifying landscape connectivity of Javan Hawk-Eagle habitat

    Science.gov (United States)

    Nurfatimah, C.; Syartinilia; Mulyani, Y. A.

    2018-05-01

    Javan Hawk-Eagle (Nisaetus bartelsi; JHE) is a law-protected endemic raptor which currently faced the decreased in number and size of habitat patches that will lead to patch isolation and species extinction. This study assessed the degree of connectivity between remnant habitat patches in central part of Java by utilizing Conefor Sensinode software as an additional tool for ArcGIS. The connectivity index was determined by three fractions which are infra, flux and connector. Using connectivity indices successfully identified 4 patches as core habitat, 9 patches as stepping-stone habitat and 6 patches as isolated habitat were derived from those connectivity indices. Those patches then being validated with land cover map derived from Landsat 8 of August 2014. 36% of core habitat covered by natural forest, meanwhile stepping stone habitat has 55% natural forest and isolated habitat covered by 59% natural forest. Isolated patches were caused by zero connectivity (PCcon = 0) and the patch size which too small to support viable JHE population. Yet, the condition of natural forest and the surrounding matrix landscape in isolated patches actually support the habitat need. Thus, it is very important to conduct the right conservation management system based on the condition of each patches.

  9. Habitat continuity and stepping-stone oceanographic distances explain population genetic connectivity of the brown alga Cystoseira amentacea.

    Science.gov (United States)

    Buonomo, Roberto; Assis, Jorge; Fernandes, Francisco; Engelen, Aschwin H; Airoldi, Laura; Serrão, Ester A

    2017-02-01

    Effective predictive and management approaches for species occurring in a metapopulation structure require good understanding of interpopulation connectivity. In this study, we ask whether population genetic structure of marine species with fragmented distributions can be predicted by stepping-stone oceanographic transport and habitat continuity, using as model an ecosystem-structuring brown alga, Cystoseira amentacea var. stricta. To answer this question, we analysed the genetic structure and estimated the connectivity of populations along discontinuous rocky habitat patches in southern Italy, using microsatellite markers at multiple scales. In addition, we modelled the effect of rocky habitat continuity and ocean circulation on gene flow by simulating Lagrangian particle dispersal based on ocean surface currents allowing multigenerational stepping-stone dynamics. Populations were highly differentiated, at scales from few metres up to thousands of kilometres. The best possible model fit to explain the genetic results combined current direction, rocky habitat extension and distance along the coast among rocky sites. We conclude that a combination of variable suitable habitat and oceanographic transport is a useful predictor of genetic structure. This relationship provides insight into the mechanisms of dispersal and the role of life-history traits. Our results highlight the importance of spatially explicit modelling of stepping-stone dynamics and oceanographic directional transport coupled with habitat suitability, to better describe and predict marine population structure and differentiation. This study also suggests the appropriate spatial scales for the conservation, restoration and management of species that are increasingly affected by habitat modifications. © 2016 John Wiley & Sons Ltd.

  10. Effects of Hydroelectric Dam Operations on the Restoration Potential of Snake River Fall Chinook Salmon (Oncorhynchus tshawytscha) Spawning Habitat Final Report, October 2005 - September 2007.

    Energy Technology Data Exchange (ETDEWEB)

    Hanrahan, Timothy P.; Richmond, Marshall C.; Arntzen, Evan V. [Pacific Northwest National Laboratory

    2007-11-13

    This report describes research conducted by the Pacific Northwest National Laboratory for the Bonneville Power Administration (BPA) as part of the Fish and Wildlife Program directed by the Northwest Power and Conservation Council. The study evaluated the restoration potential of Snake River fall Chinook salmon spawning habitat within the impounded lower Snake River. The objective of the research was to determine if hydroelectric dam operations could be modified, within existing system constraints (e.g., minimum to normal pool levels; without partial removal of a dam structure), to increase the amount of available fall Chinook salmon spawning habitat in the lower Snake River. Empirical and modeled physical habitat data were used to compare potential fall Chinook salmon spawning habitat in the Snake River, under current and modified dam operations, with the analogous physical characteristics of an existing fall Chinook salmon spawning area in the Columbia River. The two Snake River study areas included the Ice Harbor Dam tailrace downstream to the Highway 12 bridge and the Lower Granite Dam tailrace downstream approximately 12 river kilometers. These areas represent tailwater habitat (i.e., riverine segments extending from a dam downstream to the backwater influence from the next dam downstream). We used a reference site, indicative of current fall Chinook salmon spawning areas in tailwater habitat, against which to compare the physical characteristics of each study site. The reference site for tailwater habitats was the section extending downstream from the Wanapum Dam tailrace on the Columbia River. Fall Chinook salmon spawning habitat use data, including water depth, velocity, substrate size and channelbed slope, from the Wanapum reference area were used to define spawning habitat suitability based on these variables. Fall Chinook salmon spawning habitat suitability of the Snake River study areas was estimated by applying the Wanapum reference reach habitat

  11. Habitat availability does not explain the species richness patterns of European lentic and lotic freshwater animals

    DEFF Research Database (Denmark)

    Dehling, D.M.; Hof, C.; Brandle, M.

    2010-01-01

    Aim In Europe, the relationships between species richness and latitude differ for lentic (standing water) and lotic (running water) species. Freshwater animals are highly dependent on suitable habitat, and thus the distribution of available habitat should strongly influence large-scale patterns...... of species richness. We tested whether habitat availability can account for the differences in species richness patterns between European lentic and lotic freshwater animals. Location Europe. Methods We compiled occurrence data of 1959 lentic and 2445 lotic species as well as data on the amount of lentic...... for previously reported latitudinal patterns in species richness. For lotic species, richness declined with latitude, whereas there was no relationship between habitat availability and latitude. For lentic species, richness showed a hump-shaped relationship with latitude, whereas available habitat increased...

  12. Vegetation characteristics of forest stands used by woodland caribou and those disturbed by fire or logging in Manitoba

    Directory of Open Access Journals (Sweden)

    Juha M. Metsaranta

    2003-04-01

    Full Text Available This study examined woodland caribou (Rangifer tarandus caribou in an area known as the Kississing-Naosap caribou range in west central Manitoba. The vegetation characteristics of areas used by caribou and areas disturbed by fire or logging were measured in order to develop a model to estimate habitat quality from parameters collected during stan¬dard resource inventories. There was evidence that habitat index values calculated using a visual score-sheet index could be used as the basis to relate parameters commonly collected during resource inventories to habitat suitability. Use of this model to select long and short-term leave areas during forest management planning could potentially mitigate some of the negative impacts of forest harvesting. Abundance of arboreal lichen and wind-fallen trees were important predictor variables in the suitability model, but their inclusion did not explain more variance in habitat suitability than models that did not include them. Extreme post-fire deadfall abundance may play a role in predator-prey dynamics by creating habitat that is equally unsuitable for all ungulates, and thus keeping both moose and caribou densities low.

  13. Assessing habitat connectivity for ground-dwelling animals in an urban environment.

    Science.gov (United States)

    Braaker, S; Moretti, M; Boesch, R; Ghazoul, J; Obrist, M K; Bontadina, F

    To ensure viable species populations in fragmented landscapes, individuals must be able to move between suitable habitat patches. Despite the increased interest in biodiversity assessment in urban environments, the ecological relevance of habitat connectivity in highly fragmented landscapes remains largely unknown. The first step to understanding the role of habitat connectivity in urban ecology is the challenging task of assessing connectivity in the complex patchwork of contrasting habitats that is found in cities. We developed a data-based framework, minimizing the use of subjective assumptions, to assess habitat connectivity that consists of the following sequential steps: (1) identification of habitat preference based on empirical habitat-use data; (2) derivation of habitat resistance surfaces evaluating various transformation functions; (3) modeling of different connectivity maps with electrical circuit theory (Circuitscape), a method considering all possible pathways across the landscape simultaneously; and (4) identification of the best connectivity map with information-theoretic model selection. We applied this analytical framework to assess habitat connectivity for the European hedgehog Erinaceus europaeus, a model species for ground-dwelling animals, in the city of Zurich, Switzerland, using GPS track points from 40 individuals. The best model revealed spatially explicit connectivity “pinch points,” as well as multiple habitat connections. Cross-validation indicated the general validity of the selected connectivity model. The results show that both habitat connectivity and habitat quality affect the movement of urban hedgehogs (relative importance of the two variables was 19.2% and 80.8%, respectively), and are thus both relevant for predicting urban animal movements. Our study demonstrates that even in the complex habitat patchwork of cities, habitat connectivity plays a major role for ground-dwelling animal movement. Data-based habitat connectivity

  14. Eco-hydrologic model cascades: Simulating land use and climate change impacts on hydrology, hydraulics and habitats for fish and macroinvertebrates.

    Science.gov (United States)

    Guse, Björn; Kail, Jochem; Radinger, Johannes; Schröder, Maria; Kiesel, Jens; Hering, Daniel; Wolter, Christian; Fohrer, Nicola

    2015-11-15

    Climate and land use changes affect the hydro- and biosphere at different spatial scales. These changes alter hydrological processes at the catchment scale, which impact hydrodynamics and habitat conditions for biota at the river reach scale. In order to investigate the impact of large-scale changes on biota, a cascade of models at different scales is required. Using scenario simulations, the impact of climate and land use change can be compared along the model cascade. Such a cascade of consecutively coupled models was applied in this study. Discharge and water quality are predicted with a hydrological model at the catchment scale. The hydraulic flow conditions are predicted by hydrodynamic models. The habitat suitability under these hydraulic and water quality conditions is assessed based on habitat models for fish and macroinvertebrates. This modelling cascade was applied to predict and compare the impacts of climate- and land use changes at different scales to finally assess their effects on fish and macroinvertebrates. Model simulations revealed that magnitude and direction of change differed along the modelling cascade. Whilst the hydrological model predicted a relevant decrease of discharge due to climate change, the hydraulic conditions changed less. Generally, the habitat suitability for fish decreased but this was strongly species-specific and suitability even increased for some species. In contrast to climate change, the effect of land use change on discharge was negligible. However, land use change had a stronger impact on the modelled nitrate concentrations affecting the abundances of macroinvertebrates. The scenario simulations for the two organism groups illustrated that direction and intensity of changes in habitat suitability are highly species-dependent. Thus, a joined model analysis of different organism groups combined with the results of hydrological and hydrodynamic models is recommended to assess the impact of climate and land use changes on

  15. Changes in climate suitability for tourism at Adriatic coast since 1961

    Science.gov (United States)

    Zaninovic, Ksenija

    2017-04-01

    The aim of the paper is the comparison of suitability of climate conditions for tourism at the eastern Adriatic coast in the period 1961-2015. For quantitative estimation of suitability of climate for different kinds of tourism, climate index for tourism (CIT) is used. CIT integrates thermal, aesthetic and physical facets of atmospheric environment and therefore is suitable for estimation of climate satisfaction that ranges from very poor to very good. The thermal component is estimated using the physiologically equivalent temperature (PET). The index is applied for: beach tourism, cycling, hiking, cultural tourism, golf, football, motor boating and sailing. Changes in climate potential of tourism are estimated by differences of distribution of climate index for tourism. For the warmest part of the day, the results indicate the extension of the summer tourist season for beach tourism at the end of the analyzed period. On the other hand, for other tourist activities in the same period the results indicate more pronounced bimodal distribution of CIT during year, resulting with the seasonality shift of ideal conditions for most activities to spring and autumn. Besides, in the morning the improvement of favourable climate conditions for all types of tourism at the end of the period.

  16. Regional technical innovation suitability and economic growth in China

    NARCIS (Netherlands)

    Zhou, Qing; Zhu, Dan; Brouwers-Ren, Liqin

    2012-01-01

    This paper aims to use quantitative method to analyse the suitability of regional technical innovation and further compare its influence to regional economic growth in China. Based on literature review, the authors develop an evaluation index system containing four aspects (namely, innovators,

  17. Impacts of Bush Encroachment on Wildlife Species Diversity, Composition, and Habitat Preference in Ol Pejeta Conservancy, Laikipia, Kenya

    Directory of Open Access Journals (Sweden)

    Cyrus M. Kavwele

    2017-01-01

    Full Text Available Savannah ecosystems are currently facing a biome shift that changes grasslands to woody dominated landscapes, attributable to habitat degradation. In Ol Pejeta Conservancy (OPC, Euclea divinorum, an unpalatable and invasive woody species, is expanding to former savannah ecosystems with potential effects on herbivores key resources, wildlife species diversity, composition, and habitat use. We investigated wildlife species diversity, composition, and habitat preference or avoidance by wildlife in the conservancy. Infrared camera traps were deployed at the centroids of 2 km by 2 km, 50 cm above ground surface for 14 days and nights with 9 camera traps in each habitat type. Shannon wiener index revealed that wildlife species diversity was highest in E. divinorum dominated habitats and lowest in open grassland. Hierarchical Cluster Analysis revealed level of similarity in wildlife species composition between E. divinorum and mixed bushland. Jacobs index revealed that E. divinorum and mixed bushland were avoided by all guilds; however E. divinorum was significantly avoided while A. drepanolobium and open grassland were both preferred by all guilds. However, A. drepanolobium dominated habitats were significantly preferred compared to open grasslands. The findings are useful in management of sustainable ecosystems.

  18. Tundra swan habitat preferences during migration in North Dakota

    Science.gov (United States)

    Earnst, Susan L.

    1994-01-01

    I studied tundra swan (Cygnus columbianus columbianus) habitat preference in North Dakota during autumn migration, 1988-89. Many thousand tundra swans stop in the Prairie Pothole region during autumn migration, but swan resource use has not been quantified. I examined habitat preference in relation to an index of sago pondweed (Potamogeton pectinatus) presence, extent of open water, and wetland size. I compared habitat preference derived from counts of all swans to those derived from foraging swans only and cygnets only. Foraging swans preferred wetlands with sago pondweed (P = 0.03); the number of foraging swans per wetland was >4 times higher on wetlands with sago pondweed than on wetlands without sago. In contrast, nonforaging swans did not prefer wetlands with sago pondweed (P = 0.85) but preferred large wetlands (P = 0.02) and those with a high proportion of contiguous open water (P feeding than adults (P = 0.03) and occurred proportionately more often in smaller flocks (P = 0.04), but cygnets and adults had similar habitat preferences.

  19. Crucial nesting habitat for gunnison sage-grouse: A spatially explicit hierarchical approach

    Science.gov (United States)

    Aldridge, Cameron L.; Saher, D.J.; Childers, T.M.; Stahlnecker, K.E.; Bowen, Z.H.

    2012-01-01

    Gunnison sage-grouse (Centrocercus minimus) is a species of special concern and is currently considered a candidate species under Endangered Species Act. Careful management is therefore required to ensure that suitable habitat is maintained, particularly because much of the species' current distribution is faced with exurban development pressures. We assessed hierarchical nest site selection patterns of Gunnison sage-grouse inhabiting the western portion of the Gunnison Basin, Colorado, USA, at multiple spatial scales, using logistic regression-based resource selection functions. Models were selected using Akaike Information Criterion corrected for small sample sizes (AIC c) and predictive surfaces were generated using model averaged relative probabilities. Landscape-scale factors that had the most influence on nest site selection included the proportion of sagebrush cover >5%, mean productivity, and density of 2 wheel-drive roads. The landscape-scale predictive surface captured 97% of known Gunnison sage-grouse nests within the top 5 of 10 prediction bins, implicating 57% of the basin as crucial nesting habitat. Crucial habitat identified by the landscape model was used to define the extent for patch-scale modeling efforts. Patch-scale variables that had the greatest influence on nest site selection were the proportion of big sagebrush cover >10%, distance to residential development, distance to high volume paved roads, and mean productivity. This model accurately predicted independent nest locations. The unique hierarchical structure of our models more accurately captures the nested nature of habitat selection, and allowed for increased discrimination within larger landscapes of suitable habitat. We extrapolated the landscape-scale model to the entire Gunnison Basin because of conservation concerns for this species. We believe this predictive surface is a valuable tool which can be incorporated into land use and conservation planning as well the assessment of

  20. Habitat associations drive species vulnerability to climate change in boreal forests

    DEFF Research Database (Denmark)

    Mazziotta, Adriano; Triviño, María; Tikkanen, Olli-Pekka

    2016-01-01

    if species sensitivity, the species ability to tolerate climatic variations determined by traits, plays a key role in determining vulnerability. We analyse the role of species’ habitat associations, a proxy for sensitivity, in explaining vulnerability for two poorly-known but species-rich taxa in boreal...... forest, saproxylic beetles and fungi, using three IPCC emissions scenarios. Towards the end of the 21st century we projected an improvement in habitat quality associated with an increase of deadwood, an important resource for species, as a consequence of increased tree growth under high emissions...... scenarios. However, climate change will potentially reduce habitat suitability for ~9–43 % of the threatened deadwood-associated species. This loss is likely caused by future increase in timber extraction and decomposition rates causing higher deadwood turnover, which have a strong negative effect on boreal...

  1. Our use, misuse, and abandonment of a concept: Whither habitat?

    Science.gov (United States)

    Kirk, David Anthony; Park, Allysia C; Smith, Adam C; Howes, Briar J; Prouse, Brigid K; Kyssa, Naschelly G; Fairhurst, Elizabeth N; Prior, Kent A

    2018-04-01

    The foundational concept of habitat lies at the very root of the entire science of ecology, but inaccurate use of the term compromises scientific rigor and communication among scientists and nonscientists. In 1997, Hall, Krausman & Morrison showed that 'habitat' was used correctly in only 55% of articles. We ask whether use of the term has been more accurate since their plea for standardization and whether use varies across the broader range of journals and taxa in the contemporary literature (1998-2012). We searched contemporary literature for 'habitat' and habitat-related terms, ranking usage as either correct or incorrect, following a simplified version of Hall et al.'s definitions. We used generalized linear models to compare use of the term in contemporary literature with the papers reviewed by Hall et al. and to test the effects of taxa, journal impact in the contemporary articles and effects due to authors that cited Hall et al. Use of the term 'habitat' has not improved; it was still only used correctly about 55% of the time in the contemporary data. Proportionately more correct uses occurred in articles that focused on animals compared to ones that included plants, and papers that cited Hall et al. did use the term correctly more often. However, journal impact had no effect. Some habitat terms are more likely to be misused than others, notably 'habitat type', usually used to refer to vegetation type, and 'suitable habitat' or 'unsuitable habitat', which are either redundant or nonsensical by definition. Inaccurate and inconsistent use of the term can lead to (1) misinterpretation of scientific findings; (2) inefficient use of conservation resources; (3) ineffective identification and prioritization of protected areas; (4) limited comparability among studies; and (5) miscommunication of science-based findings. Correct usage would improve communication with scientists and nonscientists, thereby benefiting conservation efforts, and ecology as a science.

  2. Habitat Evaluation Procedures (HEP) Report; Sandy River Delta, Technical Report 2000-2002.

    Energy Technology Data Exchange (ETDEWEB)

    Rocklage, Ann; Ratti, John

    2002-02-01

    Land managers are often challenged with the mandate to control exotic and invasive plant species. Reed canarygrass (Phalaris arundinacea) and Himalayan blackberry (Rubus discolor) are 2 such species that are currently threatening natural areas in western United States. Reed canarygrass may be native to the inland northwest (Antieau 2000), but it has invaded many wetland areas as dense, monoculture stands. Spread of this plant species is largely attributed to human disturbances, e.g., draining, farming (Antieau 2000). Reed canarygrass often dominates other emergent vegetation such as cattail (Typha spp.) and bulrush (Scirpus spp.) (Whitson et al. 1996, Apfelbaum and Sams 1987), and the resulting habitat is largely unsuitable for wetland birds. Himalayan blackberry was introduced to the United States as a garden shrub and was planted at wildlife-management areas for food and cover. It easily colonizes disturbed places, such as roadsides, ditches, and flood plains (Hoshovsky 2000). Once established, it forms a thick, impenetrable stand, which excludes native shrub species. Although Himalayan blackberry does provide food and cover for wildlife, particularly during fall and winter, it decreases habitat diversity, and therefore, may decrease wildlife diversity. Furthermore, patterns of avian nest predation may be altered in some exotic-shrub communities (Schmidt and Whelan 1999). For land managers to make sound decisions regarding invasive-plant control, it is useful to obtain information on current plant distributions in relation to targeted wildlife species, and then use models to predict how those species may respond to changes in vegetation. The Habitat Evaluations Program was developed by the U.S. Fish and Wildlife Service to evaluate current and future habitat conditions for fish and wildlife (Stiehl 1994). The program is based on Habitat Suitability Index (HSI) models for specific wildlife species. Each model contains several variables that represent life

  3. Ellenberg's indicator values support prediction of suitable habitat for pre-diapause larvae of endangered butterfly Euphydryas aurinia.

    Directory of Open Access Journals (Sweden)

    Remigiusz Pielech

    Full Text Available In spite of the great popularity of Ellenberg's Indicator Values (EIVs in plant ecology, animal ecologists seldom use EIVs to address ecological questions. In this study we used EIVs to test their potential usefulness for the prediction of suitable habitat for pre-diapause larvae of the endangered butterfly species Euphydryas aurinia. Nine transects crossing grasslands in SW Poland with abundant populations of E. aurinia were designed. We sampled 76 vegetation plots along the transects. In addition, the presence of the larval webs of E. aurinia in sampled plots was also recorded. We then calculated the mean community EIVs of light, nitrogen, soil reaction, moisture and temperature for each sample plots. Generalized linear mixed-effects models (GLMMs were used to assess which factors determine the local occurrence of larval webs of E. aurinia. We found the larval webs only in 12 plots, while the host plant was present in 39 of the examined plots. The presence of the host plant was the most important predictor in both models including all plots or including only plots with host plants. The other significant predictor was the mean EIV of light, and its importance increased in models considering all plots. We attributed the importance of the EIV of light to the site openness and density of the vegetation layer. A positive relationship between this predictor and the presence of larval webs indicates that sites with looser vegetation, a lower contribution of shrubs and tall herbs and better penetration of photosynthetically active radiation to lower vegetation layers are preferred by E. aurinia for oviposition. Moreover, the significance of EIV of light may be linked with management practices. Many light-demanding species decline after cessation of mowing as a result of litter accumulation and the dominance of tall herbs. An absence of light-demanding species decreases the community's mean EIV of light and thus indicates the influence of meadow

  4. Persistence at distributional edges: Columbia spotted frog habitat in the arid Great Basin, USA.

    Science.gov (United States)

    Arkle, Robert S; Pilliod, David S

    2015-09-01

    A common challenge in the conservation of broadly distributed, yet imperiled species is understanding which factors facilitate persistence at distributional edges, locations where populations are often vulnerable to extirpation due to changes in climate, land use, or distributions of other species. For Columbia spotted frogs (Rana luteiventris) in the Great Basin (USA), a genetically distinct population segment of conservation concern, we approached this problem by examining (1) landscape-scale habitat availability and distribution, (2) water body-scale habitat associations, and (3) resource management-identified threats to persistence. We found that areas with perennial aquatic habitat and suitable climate are extremely limited in the southern portion of the species' range. Within these suitable areas, native and non-native predators (trout and American bullfrogs [Lithobates catesbeianus]) are widespread and may further limit habitat availability in upper- and lower-elevation areas, respectively. At the water body scale, spotted frog occupancy was associated with deeper sites containing abundant emergent vegetation and nontrout fish species. Streams with American beaver (Castor canadensis) frequently had these structural characteristics and were significantly more likely to be occupied than ponds, lakes, streams without beaver, or streams with inactive beaver ponds, highlighting the importance of active manipulation of stream environments by beaver. Native and non-native trout reduced the likelihood of spotted frog occupancy, especially where emergent vegetation cover was sparse. Intensive livestock grazing, low aquatic connectivity, and ephemeral hydroperiods were also negatively associated with spotted frog occupancy. We conclude that persistence of this species at the arid end of its range has been largely facilitated by habitat stability (i.e., permanent hydroperiod), connectivity, predator-free refugia, and a commensalistic interaction with an ecosystem

  5. Bioenergy and biodiversity: Intensified biomass extraction from hedges impairs habitat conditions for birds.

    Science.gov (United States)

    Sauerbrei, Ralf; Aue, Birgit; Krippes, Christian; Diehl, Eva; Wolters, Volkmar

    2017-02-01

    Biomass is increasingly used as an alternative source for energy in Europe. Woody material cut from hedges is considered to provide a suitable complement to maize and oilseed rape, which are currently the dominant biomass sources. Since shrubs and trees are also important habitats for birds, however, coppicing of hedges at the landscape scale may adversely affect the diversity of the avifauna. To evaluate this risk, we estimated the response of hedge birds to three management scenarios differing in cutting intensity and hedge selection. The analysis was done using hedge data of the Lautertal municipality (n = 339 hedges; Vogelsberg area, Hesse, Germany). It focused on 25 bird species, which are all listed in the hedge programme of the German Ornithological Stations. Information on the preferences of these birds for certain hedge features such as height or width was gathered by an extensive literature review. A cluster analysis on the consolidated literature data allowed us to identify three groups of birds according to their preference for certain hedge attributes. Two groups, which included Yellowhammer (Emberiza citrinella L.) (i) and Blackbird (Turdus merula L.) (ii), favoured trees located in hedges, but differed in their preference for hedge shape, with (i) being attracted by long and broad hedges and (ii) by high hedges. The third group, which included the Whitethroat (Sylvia communis L.), preferred small hedges with gaps and medium vegetation density. Spatially explicit suitability models based on these data allowed us to predict the status quo of hedge suitability for these species groups. Field surveys proved the accuracy of the predictions to be sufficient, since the hedge suitability predicted was significantly and positively correlated to the occurrence of 9 out of the 12 testable focal species. Our models predicted biomass extraction to almost always reduce hedge suitability for the three bird groups. Concerning the Yellowhammer and the Blackbird

  6. Soil seed bank in different habitats of the Eastern Desert of Egypt.

    Science.gov (United States)

    Gomaa, Nasr H

    2012-04-01

    The floristic composition and species diversity of the germinable soil seed bank were studied in three different habitats (desert salinized land, desert wadi, and reclaimed land) in the Eastern Desert of Egypt. Moreover, the degree of similarity between the seed bank and the above-ground vegetation was determined. The seed bank was studied in 40 stands representing the three habitats. Ten soil samples (each 25 × 20 cm and 5 cm depth) were randomly taken per stand. The seed bank was investigated by the seedling emergence method. Some 61 species belonging to 21 families and 54 genera were identified in the germinable seed bank. The recorded species include 43 annuals and 18 perennials. Ordination of stands by Detrended Correspondence Analysis (DCA) indicates that the stands of the three habitats are markedly distinguishable and show a clear pattern of segregation on the ordination planes. This indicates variations in the species composition among habitats. The results also demonstrate significant associations between the floristic composition of the seed bank and edaphic factors such as CaCO3, electrical conductivity, organic carbon and soil texture. The reclaimed land has the highest values of species richness, Shannon-index of diversity and the density of the germinable seed bank followed by the habitats of desert wadi and desert salinized land. Motyka's similarity index between the seed bank and the above-ground vegetation is significantly higher in reclaimed land (75.1%) compared to desert wadi (38.4%) and desert salinized land (36.5%).

  7. The effects of wetland habitat structure on Florida apple snail density

    Science.gov (United States)

    Karunaratne, L.B.; Darby, P.C.; Bennetts, R.E.

    2006-01-01

    Wetlands often support a variety of juxtaposed habitat patches (e.g., grass-, shrub- or tree-dominated) differentially suited to support the inhabiting fauna. The proportion of available habitat types has been affected by human activity and consequently has contributed to degrading habitat quality for some species. The Florida apple snail (Pomacea paludosa) has drawn attention as a critical prey item for wetlands wildlife and as an indicator of wetlands restoration success in peninsular Florida, USA. An apparent contradiction has evolved wherein this species appears intolerant of drying events, but these disturbances may be necessary to maintain suitable habitat structure for apple snails. We recently reported that assertions regarding intolerance to dry downs in this species were inaccurate. Here, we compared snail density in habitats with (wet prairie) and without (slough) emergent macrophytes, as well as evaluating the effects of structural attributes within the broad wet prairie habitat type. Snail densities were greater in prairies relative to sloughs (??2= 12.90, df=1, P=0.0003), often by a factor of two to three. Within wet prairie habitats, we found greater snail densities in Panicum hemitomon as compared to Eleocharis cellulosa (??2=31.45, df=1, P=0.0001). Significantly fewer snails were found in dense E. cellulosa as compared to habitats with lower stem density (??2= 10.73, df=1, P=0.011). Our results indicate that wet prairie habitat supports greater snail densities than nymphaea-dominatd slough. Our results have implications for wetlands water management in that continuous inundation has been shown to convert wet prairie to slough habitat, and we suggest this should be avoided in support of apple snails and their predators. ?? 2006, The Society of Wetland Scientists.

  8. Landscape suitability in Botswana for the conservation of its six large African carnivores.

    Directory of Open Access Journals (Sweden)

    Hanlie E K Winterbach

    Full Text Available Wide-ranging large carnivores often range beyond the boundaries of protected areas into human-dominated areas. Mapping out potentially suitable habitats on a country-wide scale and identifying areas with potentially high levels of threats to large carnivore survival is necessary to develop national conservation action plans. We used a novel approach to map and identify these areas in Botswana for its large carnivore guild consisting of lion (Panthera leo, leopard (Panthera pardus, spotted hyaena (Crocuta crocuta, brown hyaena (Hyaena brunnea, cheetah (Acinonyx jubatus and African wild dog (Lycaon pictus. The habitat suitability for large carnivores depends primarily on prey availability, interspecific competition, and conflict with humans. Prey availability is most likely the strongest natural determinant. We used the distribution of biomass of typical wild ungulate species occurring in Botswana which is preyed upon by the six large carnivores to evaluate the potential suitability of the different management zones in the country to sustain large carnivore populations. In areas where a high biomass of large prey species occurred, we assumed interspecific competition between dominant and subordinated competitors to be high. This reduced the suitability of these areas for conservation of subordinate competitors, and vice versa. We used the percentage of prey biomass of the total prey and livestock biomass to identify areas with potentially high levels of conflict in agricultural areas. High to medium biomass of large prey was mostly confined to conservation zones, while small prey biomass was more evenly spread across large parts of the country. This necessitates different conservation strategies for carnivores with a preference for large prey, and those that can persist in the agricultural areas. To ensure connectivity between populations inside Botswana and also with its neighbours, a number of critical areas for priority management actions exist

  9. Landscape suitability in Botswana for the conservation of its six large African carnivores.

    Science.gov (United States)

    Winterbach, Hanlie E K; Winterbach, Christiaan W; Somers, Michael J

    2014-01-01

    Wide-ranging large carnivores often range beyond the boundaries of protected areas into human-dominated areas. Mapping out potentially suitable habitats on a country-wide scale and identifying areas with potentially high levels of threats to large carnivore survival is necessary to develop national conservation action plans. We used a novel approach to map and identify these areas in Botswana for its large carnivore guild consisting of lion (Panthera leo), leopard (Panthera pardus), spotted hyaena (Crocuta crocuta), brown hyaena (Hyaena brunnea), cheetah (Acinonyx jubatus) and African wild dog (Lycaon pictus). The habitat suitability for large carnivores depends primarily on prey availability, interspecific competition, and conflict with humans. Prey availability is most likely the strongest natural determinant. We used the distribution of biomass of typical wild ungulate species occurring in Botswana which is preyed upon by the six large carnivores to evaluate the potential suitability of the different management zones in the country to sustain large carnivore populations. In areas where a high biomass of large prey species occurred, we assumed interspecific competition between dominant and subordinated competitors to be high. This reduced the suitability of these areas for conservation of subordinate competitors, and vice versa. We used the percentage of prey biomass of the total prey and livestock biomass to identify areas with potentially high levels of conflict in agricultural areas. High to medium biomass of large prey was mostly confined to conservation zones, while small prey biomass was more evenly spread across large parts of the country. This necessitates different conservation strategies for carnivores with a preference for large prey, and those that can persist in the agricultural areas. To ensure connectivity between populations inside Botswana and also with its neighbours, a number of critical areas for priority management actions exist in the

  10. Spawning habitat unsuitability: an impediment to cisco rehabilitation in Lake Michigan?

    Science.gov (United States)

    Madenjian, Charles P.; Rutherford, Edward S.; Blouin, Marc A.; Sederberg, Bryan J.; Elliott, Jeff R.

    2011-01-01

    The cisco Coregonus artedi was one of the most important native prey fishes in Lake Michigan and in the other four Laurentian Great Lakes. Most of the cisco spawning in Lake Michigan was believed to have occurred in Green Bay. The cisco population in Lake Michigan collapsed during the 1950s, and the collapse was attributed in part to habitat degradation within Green Bay. Winter water quality surveys of lower Green Bay during the 1950s and 1960s indicated that the bottom dissolved oxygen (DO) concentration was less than 2 mg/L throughout much of the lower bay, and most cisco eggs would not successfully hatch at such low DO concentrations. To determine present-day spawning habitat suitability in lower Green Bay, we compared cisco egg survival in lower Green Bay with survival at a reference site (St. Marys River, Michigan–Ontario) during 2009. We also conducted winter water quality surveys in lower Green Bay and the St. Marys River during 2009 and 2010. Cisco egg survival in lower Green Bay averaged 65.3%, which was remarkably similar to and not significantly different from the mean at the St. Marys River site (64.0%). Moreover, the lowest bottom DO concentrations recorded during the winter surveys were 11.2 mg/L in lower Green Bay and 12.7 mg/L in the St. Marys River. These relatively high DO concentrations would not be expected to have any negative effect on cisco egg survival. We conclude that winter water quality conditions in lower Green Bay were suitable for successful hatching of cisco eggs and that water quality during the egg incubation period did not represent an impediment to cisco rehabilitation in Lake Michigan. Our approach to determining spawning habitat suitability for coregonids would be applicable to other aquatic systems.

  11. Zebra mussel beds: an effective feeding ground for Ponto-Caspian gobies or suitable shelter for their prey?

    Science.gov (United States)

    Kobak, Jarosław; Poznańska, Małgorzata; Jermacz, Łukasz; Kakareko, Tomasz; Prądzynski, Daniel; Łodygowska, Małgorzata; Montowska, Karolina; Bącela-Spychalska, Karolina

    2016-01-01

    Aggregations of the Ponto-Caspian invasive zebra mussel ( Dreissena polymorpha ) constitute a suitable habitat for macroinvertebrates, considerably increasing their abundance and providing effective antipredator protection. Thus, the overall effect of a mussel bed on particular predator species may vary from positive to negative, depending on both prey density increase and predator ability to prey in a structurally complex habitat. Alien Ponto-Caspian goby fish are likely to be facilitated when introduced into new areas by zebra mussels, provided that they are capable of utilizing mussel beds as habitat and feeding grounds. We ran laboratory experiments to find which prey (chironomid larvae) densities (from ca. 500 to 2,000 individuals m -2 ) in a mussel bed make it a more beneficial feeding ground for the racer goby Babka gymnotrachelus (RG) and western tubenose goby Proterorhinus semilunaris (WTG) compared to sandy and stone substrata (containing the basic prey density of 500 ind. m -2 ). Moreover, we checked how food availability affects habitat selection by fish. Mussel beds became more suitable for fish than alternative mineral substrata when food abundance was at least two times higher (1,000 vs. 500 ind. m -2 ), regardless of fish size and species. WTG was associated with mussel beds regardless of its size and prey density, whereas RG switched to this habitat when it became a better feeding ground than alternative substrata. Larger RG exhibited a stronger affinity for mussels than small individuals. WTG fed more efficiently from a mussel bed at high food abundances than RG. A literature review has shown that increasing chironomid density, which in our study was sufficient to make a mussel habitat an attractive feeding ground for the gobies, is commonly observed in mussel beds in the field. Therefore, we conclude that zebra mussels may positively affect the alien goby species and are likely to facilitate their establishment in novel areas, contributing to an

  12. Zebra mussel beds: an effective feeding ground for Ponto-Caspian gobies or suitable shelter for their prey?

    Directory of Open Access Journals (Sweden)

    Jarosław Kobak

    2016-11-01

    Full Text Available Aggregations of the Ponto-Caspian invasive zebra mussel (Dreissena polymorpha constitute a suitable habitat for macroinvertebrates, considerably increasing their abundance and providing effective antipredator protection. Thus, the overall effect of a mussel bed on particular predator species may vary from positive to negative, depending on both prey density increase and predator ability to prey in a structurally complex habitat. Alien Ponto-Caspian goby fish are likely to be facilitated when introduced into new areas by zebra mussels, provided that they are capable of utilizing mussel beds as habitat and feeding grounds. We ran laboratory experiments to find which prey (chironomid larvae densities (from ca. 500 to 2,000 individuals m−2 in a mussel bed make it a more beneficial feeding ground for the racer goby Babka gymnotrachelus (RG and western tubenose goby Proterorhinus semilunaris (WTG compared to sandy and stone substrata (containing the basic prey density of 500 ind. m−2. Moreover, we checked how food availability affects habitat selection by fish. Mussel beds became more suitable for fish than alternative mineral substrata when food abundance was at least two times higher (1,000 vs. 500 ind. m−2, regardless of fish size and species. WTG was associated with mussel beds regardless of its size and prey density, whereas RG switched to this habitat when it became a better feeding ground than alternative substrata. Larger RG exhibited a stronger affinity for mussels than small individuals. WTG fed more efficiently from a mussel bed at high food abundances than RG. A literature review has shown that increasing chironomid density, which in our study was sufficient to make a mussel habitat an attractive feeding ground for the gobies, is commonly observed in mussel beds in the field. Therefore, we conclude that zebra mussels may positively affect the alien goby species and are likely to facilitate their establishment in novel areas

  13. Using multiscale spatial models to assess potential surrogate habitat for an imperiled reptile.

    Directory of Open Access Journals (Sweden)

    Jennifer M Fill

    Full Text Available In evaluating conservation and management options for species, practitioners might consider surrogate habitats at multiple scales when estimating available habitat or modeling species' potential distributions based on suitable habitats, especially when native environments are rare. Species' dependence on surrogates likely increases as optimal habitat is degraded and lost due to anthropogenic landscape change, and thus surrogate habitats may be vital for an imperiled species' survival in highly modified landscapes. We used spatial habitat models to examine a potential surrogate habitat for an imperiled ambush predator (eastern diamondback rattlesnake, Crotalus adamanteus; EDB at two scales. The EDB is an apex predator indigenous to imperiled longleaf pine ecosystems (Pinus palustris of the southeastern United States. Loss of native open-canopy pine savannas and woodlands has been suggested as the principal cause of the species' extensive decline. We examined EDB habitat selection in the Coastal Plain tidewater region to evaluate the role of marsh as a potential surrogate habitat and to further quantify the species' habitat requirements at two scales: home range (HR and within the home range (WHR. We studied EDBs using radiotelemetry and employed an information-theoretic approach and logistic regression to model habitat selection as use vs.We failed to detect a positive association with marsh as a surrogate habitat at the HR scale; rather, EDBs exhibited significantly negative associations with all landscape patches except pine savanna. Within home range selection was characterized by a negative association with forest and a positive association with ground cover, which suggests that EDBs may use surrogate habitats of similar structure, including marsh, within their home ranges. While our HR analysis did not support tidal marsh as a surrogate habitat, marsh may still provide resources for EDBs at smaller scales.

  14. Habitat structure and body size distributions: Cross-ecosystem comparison for taxa with determinate and indeterminate growth

    Science.gov (United States)

    Nash, Kirsty L.; Allen, Craig R.; Barichievy, Chris; Nystrom, Magnus; Sundstrom, Shana M.; Graham, Nicholas A.J.

    2014-01-01

    Habitat structure across multiple spatial and temporal scales has been proposed as a key driver of body size distributions for associated communities. Thus, understanding the relationship between habitat and body size is fundamental to developing predictions regarding the influence of habitat change on animal communities. Much of the work assessing the relationship between habitat structure and body size distributions has focused on terrestrial taxa with determinate growth, and has primarily analysed discontinuities (gaps) in the distribution of species mean sizes (species size relationships or SSRs). The suitability of this approach for taxa with indeterminate growth has yet to be determined. We provide a cross-ecosystem comparison of bird (determinate growth) and fish (indeterminate growth) body mass distributions using four independent data sets. We evaluate three size distribution indices: SSRs, species size–density relationships (SSDRs) and individual size–density relationships (ISDRs), and two types of analysis: looking for either discontinuities or abundance patterns and multi-modality in the distributions. To assess the respective suitability of these three indices and two analytical approaches for understanding habitat–size relationships in different ecosystems, we compare their ability to differentiate bird or fish communities found within contrasting habitat conditions. All three indices of body size distribution are useful for examining the relationship between cross-scale patterns of habitat structure and size for species with determinate growth, such as birds. In contrast, for species with indeterminate growth such as fish, the relationship between habitat structure and body size may be masked when using mean summary metrics, and thus individual-level data (ISDRs) are more useful. Furthermore, ISDRs, which have traditionally been used to study aquatic systems, present a potentially useful common currency for comparing body size distributions

  15. Magellanic Woodpeckers in three national parks of central-southern Chile: habitat effects and population variation over the last two decades

    Directory of Open Access Journals (Sweden)

    Pablo M. Vergara

    2017-12-01

    Full Text Available A major challenge for protected areas is providing wildlife with enough suitable habitat to cope with stochastic environment and increased pressure from the surrounding landscapes. In this study, we addressed changes in local populations of Magellanic Woodpeckers (Campephilus magellanicus occupying three national parks of central-southern Chile. We compared the breeding and postbreeding abundance of woodpeckers during the 1990s with the present (2016 abundance (n = 4 years, and assessed the extent to which abundance was explained by forest type and quality of foraging habitat (as quantified through the plant senescence reflectance index; PSRI. Results show a distinctive temporal variation in woodpecker abundance at each park, with local populations of Magellanic Woodpeckers declining by 42.2% in Conguillío National Park, but increasing by 34.3% in Nahuelbuta National Park. Woodpeckers responded to forest conditions within each park such that their abundance increased with high quality of foraging habitat, i.e., large PSRI values, and the presence of old-growth Monkey puzzle (Araucaria araucana - Nothofagus pumilio mixed forest. Anecdotal evidence suggests that populations of woodpeckers in Conguillío National Park might have responded negatively to large-scale disturbances from recent forest fires affecting part of the forest area within park. Because stochastic events seemed to strongly mediate population changes, our findings suggest that regional conservation of Magellanic Woodpeckers requires expanding the current conservation area network in central-southern Chile.

  16. A presence-only model of suitable roosting habitat for the endangered Indiana bat in the southern Appalachians

    Science.gov (United States)

    K.R. Hammond; J.M. O’Keefe; S.P. Aldrich; Susan Loeb

    2016-01-01

    We know little about how forest bats, which are cryptic and mobile, use roosts on a landscape scale. For widely distributed species like the endangered Indiana bat Myotis sodalis, identifying landscape-scale roost habitat associations will be important for managing the species in different regions where it occurs. For example, in the southern Appalachian Mountains, USA...

  17. Chinook salmon use of spawning patches: relative roles of habitat quality, size, and connectivity.

    Science.gov (United States)

    Isaak, Daniel J; Thurow, Russell F; Rieman, Bruce E; Dunham, Jason B

    2007-03-01

    Declines in many native fish populations have led to reassessments of management goals and shifted priorities from consumptive uses to species preservation. As management has shifted, relevant environmental characteristics have evolved from traditional metrics that described local habitat quality to characterizations of habitat size and connectivity. Despite the implications this shift has for how habitats may be prioritized for conservation, it has been rare to assess the relative importance of these habitat components. We used an information-theoretic approach to select the best models from sets of logistic regressions that linked habitat quality, size, and connectivity to the occurrence of chinook salmon (Oncorhynchus tshawytscha) nests. Spawning distributions were censused annually from 1995 to 2004, and data were complemented with field measurements that described habitat quality in 43 suitable spawning patches across a stream network that drained 1150 km2 in central Idaho. Results indicated that the most plausible models were dominated by measures of habitat size and connectivity, whereas habitat quality was of minor importance. Connectivity was the strongest predictor of nest occurrence, but connectivity interacted with habitat size, which became relatively more important when populations were reduced. Comparison of observed nest distributions to null model predictions confirmed that the habitat size association was driven by a biological mechanism when populations were small, but this association may have been an area-related sampling artifact at higher abundances. The implications for habitat management are that the size and connectivity of existing habitat networks should be maintained whenever possible. In situations where habitat restoration is occurring, expansion of existing areas or creation of new habitats in key areas that increase connectivity may be beneficial. Information about habitat size and connectivity also could be used to strategically

  18. Ecomorphology and phylogenetic risk: Implications for habitat reconstruction using fossil bovids.

    Science.gov (United States)

    Scott, Robert S; Barr, W Andrew

    2014-08-01

    Reconstructions of paleohabitats are necessary aids in understanding hominin evolution. The morphology of species from relevant sites, understood in terms of functional relationships to habitat (termed ecomorphology), offers a direct link to habitat. Bovids are a speciose radiation that includes many habitat specialists and are abundant in the fossil record. Thus, bovids are extremely common in ecomorphological analyses. However, bovid phylogeny and habitat preference are related, which raises the possibility that analyses linking habitat with morphology are not 'taxon free' but 'taxon-dependent.' Here we analyze eight relative dimensions and one shape index of the metatarsal for a sample of 72 bovid species and one antilocaprid. The selected variables have been previously shown to have strong associations with habitat and to have functional explanations for these associations. Phylogenetic generalized least squares analyses of these variables, including habitat and size, resulted in estimates for the parameter lambda (used to model phylogenetic signal) varying from zero to one. Thus, while phylogeny, morphology, and habitat all march together among the bovids, the odds that phylogeny confounds ecomorphological analyses may vary depending on particular morphological characteristics. While large values of lambda do not necessarily indicate that habitat differences are unimportant drivers of morphology, we consider the low value of lambda for relative metatarsal width suggestive that conclusions about habitat built on observations of this particular morphology carry with them less 'phylogenetic risk.' We suggest that the way forward for ecomorphology is grounded in functionally relevant observations and careful consideration of phylogeny designed to bracket probable habitat preferences appropriately. Separate consideration of different morphological variables may help to determine the level of 'phylogenetic risk' attached to conclusions linking habitat and morphology

  19. Towards a resource-based habitat approach for spatial modelling of vector-borne disease risks.

    Science.gov (United States)

    Hartemink, Nienke; Vanwambeke, Sophie O; Purse, Bethan V; Gilbert, Marius; Van Dyck, Hans

    2015-11-01

    Given the veterinary and public health impact of vector-borne diseases, there is a clear need to assess the suitability of landscapes for the emergence and spread of these diseases. Current approaches for predicting disease risks neglect key features of the landscape as components of the functional habitat of vectors or hosts, and hence of the pathogen. Empirical-statistical methods do not explicitly incorporate biological mechanisms, whereas current mechanistic models are rarely spatially explicit; both methods ignore the way animals use the landscape (i.e. movement ecology). We argue that applying a functional concept for habitat, i.e. the resource-based habitat concept (RBHC), can solve these issues. The RBHC offers a framework to identify systematically the different ecological resources that are necessary for the completion of the transmission cycle and to relate these resources to (combinations of) landscape features and other environmental factors. The potential of the RBHC as a framework for identifying suitable habitats for vector-borne pathogens is explored and illustrated with the case of bluetongue virus, a midge-transmitted virus affecting ruminants. The concept facilitates the study of functional habitats of the interacting species (vectors as well as hosts) and provides new insight into spatial and temporal variation in transmission opportunities and exposure that ultimately determine disease risks. It may help to identify knowledge gaps and control options arising from changes in the spatial configuration of key resources across the landscape. The RBHC framework may act as a bridge between existing mechanistic and statistical modelling approaches. © 2014 The Authors. Biological Reviews published by John Wiley & Sons Ltd on behalf of Cambridge Philosophical Society.

  20. Chapter 13 Application of landscape and habitat suitability models to conservation: the Hoosier National Forest land-management plan

    Science.gov (United States)

    Chadwick D. Rittenhouse; Stephen R. Shifley; William D. Dijak; Zhaofei Fan; Frank R., III Thompson; Joshua J. Millspaugh; Judith A. Perez; Cynthia M. Sandeno

    2011-01-01

    We demonstrate an approach to integrated land-management planning and quantify differences in vegetation and avian habitat conditions among 5 management alternatives as part of the Hoosier National Forest planning process. The alternatives differed in terms of the type, extent, magnitude, frequency, and location of management activities. We modeled ecological processes...

  1. Developing landscape habitat models for rare amphibians with small geographic ranges: a case study of Siskiyou Mountains salamanders in the western USA

    Science.gov (United States)

    Nobuya Suzuki; Deanna H. Olson; Edward C. Reilly

    2007-01-01

    To advance the development of conservation planning for rare species with small geographic ranges, we determined habitat associations of Siskiyou Mountains salamanders (Plethodon stormi) and developed habitat suitability models at fine (10 ha), medium (40 ha), and broad (202 ha) spatial scales using available geographic information systems data and...

  2. Development and evaluation of the Lake Multi-biotic Integrity Index for Dongting Lake, China

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    Xing Wang

    2015-06-01

    Full Text Available A Lake Multi-biotic Integrity Index (LMII for the China’s second largest interior lake (Dongting Lake was developed to assess the water quality status using algal and macroinvertebrate metrics. Algae and benthic macroinvertebrate assemblages were sampled at 10 sections across 3 subregions of Dongting Lake. We used a stepwise process to evaluate properties of candidate metrics and selected ten for the LMII: Pampean diatom index, diatom quotient, trophic diatom index, relative abundance diatoms, Margalef index of algae, percent sensitive diatoms, % facultative individuals, % Chironomidae individuals, % predators individuals, and total number of macroinvertebrate taxa. We then tested the accuracy and feasibility of the LMII by comparing the correlation with physical-chemical parameters. Evaluation of the LMII showed that it discriminated well between reference and impaired sections and was strongly related to the major chemical and physical stressors (r = 0.766, P<0.001. The re-scored results from the 10 sections showed that the water quality of western Dongting Lake was good, while that of southern Dongting Lake was relatively good and whereas that of eastern Dongting Lake was poor. The discriminatory biocriteria of the LMII are suitable for the assessment of the water quality of Dongting Lake. Additionally, more metrics belonging to habitat, hydrology, physics and chemistry should be considered into the LMII, so as to establish comprehensive assessment system which can reflect the community structure of aquatic organisms, physical and chemical characteristics of water environment, human activities, and so on.

  3. Habitats and landscapes associated with bird species in a lowland conifer-dominated ecosystem

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    Edmund J. Zlonis

    2017-06-01

    Full Text Available Human-induced effects on lowland conifer forests in hemiboreal regions are increasing because of expanded use of these northern ecosystems for raw materials, energy, and minerals as well as the potential effects of climatic changes. These forests support many breeding bird species across the Holarctic and allow the persistence of several boreal bird species in hemiboreal and even temperate regions. These bird species are of particular conservation concern as shifting patterns northward in forest composition caused by climate change will likely affect their populations. However, effective management and conservation options are limited because the specifics of these species' breeding habitats are not well understood. We modeled and mapped habitat suitability for 11 species of boreal birds that breed in the lowland conifer forests of the Agassiz Lowlands Ecological Subsection in northern Minnesota and are likely to have reduced breeding habitat in the future: Spruce Grouse (Falcipennis canadensis, Black-backed Woodpecker (Picoides arcticus, Olive-sided Flycatcher (Contopus cooperi, Yellow-bellied Flycatcher (Empidonax flaviventris, Boreal Chickadee (Poecile hudsonicus, Golden-crowned Kinglet (Regulus satrapa, Ruby-crowned Kinglet (Regulus calendula, Swainson's Thrush (Catharus ustulatus, Connecticut Warbler (Oporornis agilis, Palm Warbler (Setophaga palmarum, and Dark-eyed Junco (Junco hyemalis. Sets of 7 to 16 potential environmental covariates, including both stand-level and landscape attributes, were used to develop individual species models. Within this lowland conifer-dominated ecosystem, we found significant selection for specific forest and landscape characteristics by all but one of these species, with the best models including between one and nine variables. Habitat suitability maps were developed from these models and predictions tested with an independent dataset. Model performance depended on species, correctly predicting 56-96% of

  4. Fine-Scale Evaluation of Giant Panda Habitats and Countermeasures against the Future Impacts of Climate Change and Human Disturbance (2015–2050: A Case Study in Ya’an, China

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    Jing Zhen

    2018-04-01

    Full Text Available The accelerating impact of climate change on giant panda (Ailuropoda melanoleuca habitats have become an international research topic. Recently, many studies have also focused on medium-sized mountain ranges or entire giant panda habitats to predict how habitats will change as the climate warms, but few say in detail what to do or where to focus efforts. To fill this gap, this paper presents a new method to take comprehensive, fine-scale evaluations incorporating climate change, human disturbance, and current conservation networks and translate them into practical countermeasures in order to help decision-makers set priority regions for conservation. This study looked at the core area of the Sichuan Giant Panda Sanctuaries United Nations Educational, Scientific and Cultural Organisation (UNESCO World Natural Heritage site, namely Ya’an Prefecture, as a case study. The research employs the Maximum Entropy (MaxEnt modeling algorithm to analyze how climate change will affect the habitats by 2050 under two scenarios: only considering the influence of climate change, and thinking about the coupled influence of climate change and human disturbance together. The results showed the following: (1 only considering climate change, the overall habitat that can be used by giant pandas in this region will increase, which differs from most of the previous results showing a decrease; (2 the new suitable habitat will shift westward, northward and eastward in this region; (3 conversely, the suitable habitat will be significantly reduced (about 58.56% and fragmentized when taking into account human disturbance factors; (4 at present, the three small nature reserves are far from each other and cannot cover the present habitat well nor protect the potentially suitable habitats. Based on the comprehensive analysis of habitat shifts and our two field investigations, we suggest two regions that can be expanded into the conservation network to contain more potentially

  5. Land Suitability Assessment for Sugarcane in "Herois de Caxito" (Angola

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    Baert, G.

    2005-01-01

    Full Text Available The suitability of the soils surrounding the sugarcane plantation at "Herois de Caxito" (7068 ha is assessed. The main goal is to identify land suitability for the enlargement of the present plantation, using FAO land evaluation models (modified to suit Herois de Caxito conditions and GIS. Calculations of the radiationthermal production potential (RPP, land production potential (LPP, irrigation suitability index, and evaluation of the irrigation water quality are done. The water-limited production potential (WPP is found equal to the RPP, because water needs were fully met under irrigation. Maps showing the spatial distribution of the LPP and the suitability for irrigation are generated. The matching of irrigation and fertility indices has shown that, about 40% of the soils with good fertility for sugarcane production present low suitability for irrigation, the main limitations being the very fine texture and the drainage. The available surface water at Herois de Caxito (Dande river is of very good quality for irrigation of sugarcane.

  6. Stratification of habitats for identifying habitat selection by Merriam's turkeys

    Science.gov (United States)

    Mark A. Rumble; Stanley H. Anderson

    1992-01-01

    Habitat selection patterns of Merriam’s Turkeys were compared in hierarchical analyses of three levels of habitat stratification. Habitat descriptions in first-level analyses were based on dominant species of vegetation. Habitat descriptions in second-level analyses were based on dominant species of vegetation and overstory canopy cover. Habitat descriptions in third-...

  7. Potential for Grey wolf Canis lupus in the Netherlands : effects of habitat fragmentation and climate change on the carrying capacity and population dynamics

    NARCIS (Netherlands)

    Potiek, A.; Wamelink, G.W.W.; Jochem, R.; Langevelde, van F.

    2012-01-01

    Recolonization of the Netherlands by wolves is likely to occur within 5 to 10 years, and for management reasons the habitat suitability should be understood. Therefore, I predicted the carrying capacity and population dynamics of the wolf in the Netherlands, and studied the effects of habitat

  8. Daytime habitat selection for juvenile parr brown trout (Salmo trutta in small lowland streams

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    Conallin J.

    2014-03-01

    Full Text Available Physical habitat is important in determining the carrying capacity of juvenile brown trout, and within freshwater management. Summer daytime physical habitat selection for the parr lifestage (7–20 cm juvenile brown trout (Salmo trutta was assessed in 6 small lowland streams. Habitat preference was determined for the four variables; water velocity, water depth, substrate and cover, and the preferences for physical habitat selection were expressed in terms of habitat suitability indices (HSI’s. The statistical confidence of HSI’s was evaluated using power analysis. It was found that a minimum of 22 fish observations was needed to have statistical confidence in the HSIs for water depth, and a minimum of 92 fish observations for water velocity during daytime summer conditions. Generally parr were utilising the deeper habitats, indicating preference for deeper water. Cover was also being selected for at all sites, but selection was inconsistent among sites for the variables substrate and velocity. The results indicate that during daytime summer conditions water depth is a significant variable for parr habitat selection in these small lowland streams, with cover also being important. Therefore, daytime refugia may be a critical limiting factor for parr in small lowland streams, and important for stream management actions under the Water Framework Directive.

  9. Arsenic accumulation and speciation in plants from different habitats

    OpenAIRE

    Bergqvist, Claes; Greger, Maria

    2012-01-01

    This is the postprint version of the article. The published version of the article can be located here: http://www.sciencedirect.com/science/article/pii/S0883292711004914 Understanding As accumulation in plants is necessary in order to alleviate problems with As in the environment and to improve sustainable As phytotechnologies. To find suitable candidates for phytoremediation purposes and to investigate specific accumulation patterns due to growth habitat and plant groups, As accumulation...

  10. Physical habitat simulation system reference manual: version II

    Science.gov (United States)

    Milhous, Robert T.; Updike, Marlys A.; Schneider, Diane M.

    1989-01-01

    stream system basis. Such analysis is outside the scope of this manual, which concentrates on simulation of physical habitat based on depth, velocity, and a channel index. The results form PHABSIM can be used alone or by using a series of habitat time series programs that have been developed to generate monthly or daily habitat time series from the Weighted Usable Area versus streamflow table resulting from the habitat simulation programs and streamflow time series data. Monthly and daily streamflow time series may be obtained from USGS gages near the study site or as the output of river system management models.

  11. Suitability

    NARCIS (Netherlands)

    Bokdam, J.; Braeckel, van A.

    2002-01-01

    The suitability of grazing, burning, mowing and cutting as tools for succession control in peatland was assessed and expressed on a scale from 0 - 1. All management tools are suitable, but their effects are conditional. The suitability depends on the targeted vegetation transition and on their

  12. Metapopulation responses to patch connectivity and quality are masked by successional habitat dynamics.

    Science.gov (United States)

    Hodgson, Jenny A; Moilanen, Atte; Thomas, Chris D

    2009-06-01

    Many species have to track changes in the spatial distribution of suitable habitat from generation to generation. Understanding the dynamics of such species will likely require spatially explicit models, and patch-based metapopulation models are potentially appropriate. However, relatively little attention has been paid to developing metapopulation models that include habitat dynamics, and very little to testing the predictions of these models. We tested three predictions from theory about the differences between dynamic habitat metapopulations and their static counterparts using long-term survey data from two metapopulations of the butterfly Plebejus argus. As predicted, we showed first that the metapopulation inhabiting dynamic habitat had a lower level of habitat occupancy, which could not be accounted for by other differences between the metapopulations. Secondly, we found that patch occupancy did not significantly increase with increasing patch connectivity in dynamic habitat, whereas there was a strong positive connectivity-occupancy relationship in static habitat. Thirdly, we found no significant relationship between patch occupancy and patch quality in dynamic habitat, whereas there was a strong, positive quality-occupancy relationship in static habitat. Modeling confirmed that the differences in mean patch occupancy and connectivity-occupancy slope could arise without changing the species' metapopulation parameters-importantly, without changing the dependence of colonization upon connectivity. We found that, for a range of landscape scenarios, successional simulations always produced a lower connectivity-occupancy slope than comparable simulations with static patches, whether compared like-for-like or controlling for mean occupancy. We conclude that landscape-scale studies may often underestimate the importance of connectivity for species occurrence and persistence because habitat turnover can obscure the connectivity-occupancy relationship in commonly

  13. Home range and habitat use of reintroduced Javan Deer in Panaitan Island, Ujung Kulon National Park

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    Pairah

    2015-09-01

    Full Text Available The Javan deer which inhabit Panaitan Island (± 175 Km2 were reintroduced from Peucang Island (± 4.5 Km2 during 1978–1982 (3 males: 13 females. The information of home range and habitat use of these animals were needed for wildlife habitat management especially in the small island habitat. We measured the home range size and habitat use of Javan deer in Peucang Island and Panaitan Island and compared them. The home range size was measured using Minimum Convex Polygon and then the polygon of home ranges were used to measure the habitat use. The results showed that in general the home range size in all age class of Javan deer between both islands did not differ significantly, only subadult males in Peucang Island which have a larger home range size than subadult males in Panaitan Island. Javan deer in Panaitan Island have found suitable conditions.

  14. Spatial Scaling of Environmental Variables Improves Species-Habitat Models of Fishes in a Small, Sand-Bed Lowland River.

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    Johannes Radinger

    Full Text Available Habitat suitability and the distinct mobility of species depict fundamental keys for explaining and understanding the distribution of river fishes. In recent years, comprehensive data on river hydromorphology has been mapped at spatial scales down to 100 m, potentially serving high resolution species-habitat models, e.g., for fish. However, the relative importance of specific hydromorphological and in-stream habitat variables and their spatial scales of influence is poorly understood. Applying boosted regression trees, we developed species-habitat models for 13 fish species in a sand-bed lowland river based on river morphological and in-stream habitat data. First, we calculated mean values for the predictor variables in five distance classes (from the sampling site up to 4000 m up- and downstream to identify the spatial scale that best predicts the presence of fish species. Second, we compared the suitability of measured variables and assessment scores related to natural reference conditions. Third, we identified variables which best explained the presence of fish species. The mean model quality (AUC = 0.78, area under the receiver operating characteristic curve significantly increased when information on the habitat conditions up- and downstream of a sampling site (maximum AUC at 2500 m distance class, +0.049 and topological variables (e.g., stream order were included (AUC = +0.014. Both measured and assessed variables were similarly well suited to predict species' presence. Stream order variables and measured cross section features (e.g., width, depth, velocity were best-suited predictors. In addition, measured channel-bed characteristics (e.g., substrate types and assessed longitudinal channel features (e.g., naturalness of river planform were also good predictors. These findings demonstrate (i the applicability of high resolution river morphological and instream-habitat data (measured and assessed variables to predict fish presence, (ii the

  15. Modeling intrinsic potential for beaver (Castor canadensis) habitat to inform restoration and climate change adaptation

    Science.gov (United States)

    Dittbrenner, Benjamin J.; Pollack, Michael M.; Schilling, Jason W.; Olden, Julian D.; Lawler, Joshua J.; Torgersen, Christian E.

    2018-01-01

    Through their dam-building activities and subsequent water storage, beaver have the potential to restore riparian ecosystems and offset some of the predicted effects of climate change by modulating streamflow. Thus, it is not surprising that reintroducing beaver to watersheds from which they have been extirpated is an often-used restoration and climate-adaptation strategy. Identifying sites for reintroduction, however, requires detailed information about habitat factors—information that is not often available at broad spatial scales. Here we explore the potential for beaver relocation throughout the Snohomish River Basin in Washington, USA with a model that identifies some of the basic building blocks of beaver habitat suitability and does so by relying solely on remotely sensed data. More specifically, we developed a generalized intrinsic potential model that draws on remotely sensed measures of stream gradient, stream width, and valley width to identify where beaver could become established if suitable vegetation were to be present. Thus, the model serves as a preliminary screening tool that can be applied over relatively large extents. We applied the model to 5,019 stream km and assessed the ability of the model to correctly predict beaver habitat by surveying for beavers in 352 stream reaches. To further assess the potential for relocation, we assessed land ownership, use, and land cover in the landscape surrounding stream reaches with varying levels of intrinsic potential. Model results showed that 33% of streams had moderate or high intrinsic potential for beaver habitat. We found that no site that was classified as having low intrinsic potential had any sign of beavers and that beaver were absent from nearly three quarters of potentially suitable sites, indicating that there are factors preventing the local population from occupying these areas. Of the riparian areas around streams with high intrinsic potential for beaver, 38% are on public lands and 17

  16. Modeling intrinsic potential for beaver (Castor canadensis) habitat to inform restoration and climate change adaptation.

    Science.gov (United States)

    Dittbrenner, Benjamin J; Pollock, Michael M; Schilling, Jason W; Olden, Julian D; Lawler, Joshua J; Torgersen, Christian E

    2018-01-01

    Through their dam-building activities and subsequent water storage, beaver have the potential to restore riparian ecosystems and offset some of the predicted effects of climate change by modulating streamflow. Thus, it is not surprising that reintroducing beaver to watersheds from which they have been extirpated is an often-used restoration and climate-adaptation strategy. Identifying sites for reintroduction, however, requires detailed information about habitat factors-information that is not often available at broad spatial scales. Here we explore the potential for beaver relocation throughout the Snohomish River Basin in Washington, USA with a model that identifies some of the basic building blocks of beaver habitat suitability and does so by relying solely on remotely sensed data. More specifically, we developed a generalized intrinsic potential model that draws on remotely sensed measures of stream gradient, stream width, and valley width to identify where beaver could become established if suitable vegetation were to be present. Thus, the model serves as a preliminary screening tool that can be applied over relatively large extents. We applied the model to 5,019 stream km and assessed the ability of the model to correctly predict beaver habitat by surveying for beavers in 352 stream reaches. To further assess the potential for relocation, we assessed land ownership, use, and land cover in the landscape surrounding stream reaches with varying levels of intrinsic potential. Model results showed that 33% of streams had moderate or high intrinsic potential for beaver habitat. We found that no site that was classified as having low intrinsic potential had any sign of beavers and that beaver were absent from nearly three quarters of potentially suitable sites, indicating that there are factors preventing the local population from occupying these areas. Of the riparian areas around streams with high intrinsic potential for beaver, 38% are on public lands and 17% are

  17. Oyster larvae settle in response to habitat-associated underwater sounds.

    Science.gov (United States)

    Lillis, Ashlee; Eggleston, David B; Bohnenstiehl, DelWayne R

    2013-01-01

    Following a planktonic dispersal period of days to months, the larvae of benthic marine organisms must locate suitable seafloor habitat in which to settle and metamorphose. For animals that are sessile or sedentary as adults, settlement onto substrates that are adequate for survival and reproduction is particularly critical, yet represents a challenge since patchily distributed settlement sites may be difficult to find along a coast or within an estuary. Recent studies have demonstrated that the underwater soundscape, the distinct sounds that emanate from habitats and contain information about their biological and physical characteristics, may serve as broad-scale environmental cue for marine larvae to find satisfactory settlement sites. Here, we contrast the acoustic characteristics of oyster reef and off-reef soft bottoms, and investigate the effect of habitat-associated estuarine sound on the settlement patterns of an economically and ecologically important reef-building bivalve, the Eastern oyster (Crassostrea virginica). Subtidal oyster reefs in coastal North Carolina, USA show distinct acoustic signatures compared to adjacent off-reef soft bottom habitats, characterized by consistently higher levels of sound in the 1.5-20 kHz range. Manipulative laboratory playback experiments found increased settlement in larval oyster cultures exposed to oyster reef sound compared to unstructured soft bottom sound or no sound treatments. In field experiments, ambient reef sound produced higher levels of oyster settlement in larval cultures than did off-reef sound treatments. The results suggest that oyster larvae have the ability to respond to sounds indicative of optimal settlement sites, and this is the first evidence that habitat-related differences in estuarine sounds influence the settlement of a mollusk. Habitat-specific sound characteristics may represent an important settlement and habitat selection cue for estuarine invertebrates and could play a role in driving

  18. Oyster larvae settle in response to habitat-associated underwater sounds.

    Directory of Open Access Journals (Sweden)

    Ashlee Lillis

    Full Text Available Following a planktonic dispersal period of days to months, the larvae of benthic marine organisms must locate suitable seafloor habitat in which to settle and metamorphose. For animals that are sessile or sedentary as adults, settlement onto substrates that are adequate for survival and reproduction is particularly critical, yet represents a challenge since patchily distributed settlement sites may be difficult to find along a coast or within an estuary. Recent studies have demonstrated that the underwater soundscape, the distinct sounds that emanate from habitats and contain information about their biological and physical characteristics, may serve as broad-scale environmental cue for marine larvae to find satisfactory settlement sites. Here, we contrast the acoustic characteristics of oyster reef and off-reef soft bottoms, and investigate the effect of habitat-associated estuarine sound on the settlement patterns of an economically and ecologically important reef-building bivalve, the Eastern oyster (Crassostrea virginica. Subtidal oyster reefs in coastal North Carolina, USA show distinct acoustic signatures compared to adjacent off-reef soft bottom habitats, characterized by consistently higher levels of sound in the 1.5-20 kHz range. Manipulative laboratory playback experiments found increased settlement in larval oyster cultures exposed to oyster reef sound compared to unstructured soft bottom sound or no sound treatments. In field experiments, ambient reef sound produced higher levels of oyster settlement in larval cultures than did off-reef sound treatments. The results suggest that oyster larvae have the ability to respond to sounds indicative of optimal settlement sites, and this is the first evidence that habitat-related differences in estuarine sounds influence the settlement of a mollusk. Habitat-specific sound characteristics may represent an important settlement and habitat selection cue for estuarine invertebrates and could play a

  19. Integrated assessment of river health based on the conditions of water quality,aquatic life and physical habitat

    Institute of Scientific and Technical Information of China (English)

    MENG Wei; ZHANG Nan; ZHANG Yuan; ZHENG Binghui

    2009-01-01

    The health conditions of Liao River were assessed using 25 sampling sites in April 2005, with water quality index, biotic index and physical habitat quality index.Based on the method of cluster analysis (CA) for water quality indices, it reveals that heavily polluted sites of Liao River are located at estuary and mainstream.The aquatic species surveyed were attached algae and benthic invertebrates.The result shows that the diversity and biomass of attached algae and benthic index of biotic integrity (B-IBI) are degrading as the chemical and physical quality of water bodies deteriorating.Physiochemical parameters, BOD5, CODCr, TN, TP, NH3-N, DO, petroleum hydrocarbon and conductivity, were statistically analyzed with principal component analysis and correlation analysis.The statistical results were incorporated into the integrated assessing water quality index, combining fecal coliform count, attached algae diversity, B-IBI and physical habitat quality score, a comprehensive integrated assessing system of river ecological health was established.Based on the systimetic assesment, the assessed sites are categorized into 9 "healthy" and "sub-healthy" sites and 8 "sub-sick" and "sick" sites.

  20. Habitat Use Database - Groundfish Essential Fish Habitat (EFH) Habitat Use Database (HUD)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The Habitat Use Database (HUD) was specifically designed to address the need for habitat-use analyses in support of groundfish EFH, HAPCs, and fishing and nonfishing...

  1. Ancient DNA reveals that bowhead whale lineages survived Late Pleistocene climate change and habitat shifts

    DEFF Research Database (Denmark)

    Foote, Andrew David; Kaschner, Kristin; Schultze, Sebastian E.

    2013-01-01

    that a true Arctic species, the bowhead whale (Balaena mysticetus), shifted its range and tracked its core suitable habitat northwards during the rapid climate change of the Pleistocene-Holocene transition. Late Pleistocene lineages survived into the Holocene and effective female population size increased...

  2. Common dolphins in the Alboran Sea: Facing a reduction in their suitable habitat due to an increase in Sea surface temperature

    Science.gov (United States)

    Cañadas, A.; Vázquez, J. A.

    2017-07-01

    The short-beaked common dolphin Mediterranean subpopulation appears to have suffered a steep decline over recent decades and was listed in 2003 as 'Endangered' in the IUCN Red List of Threatened Species. The Alboran Sea is the last region in the Mediterranean where it is still abundant. In this study, we relate features of this species' ecology to climate change, focusing on distribution and density. This work used a two decades-long dataset on the common dolphin in the Alboran Sea and a time series of environmental changes. Once established, these relationships were used in conjunction with some simulated scenarios of environmental change to predict the potential effects of further change on these species over the next 100 years. Two approaches were used: 1) projection from a regression line from local variation, and 2) a HadCM3 climate model with time-varying anthropogenic effects. Generalized Additive Models were used to model the relationship between density of the animals with SST and other environmental covariates. Results from both approaches were very similar. The predictions of density from the regression line fell within the ranges from the HadCM3 climate model, the first being based on local and locally, point to point, differentiated information, which lead us to consider the first approach as the best for this area. At the small spatial scale of the Alboran Sea and Gulf of Vera, an increase in SST will potentially yield a reduction in suitable habitat for common dolphins, with a progressive reduction in density from east to west.

  3. Habitat use by a freshwater dolphin in the low-water season

    Science.gov (United States)

    Braulik, Gill T.; Reichert, Albert P.; Ehsan, Tahir; Khan, Samiullah; Northridge, Simon P.; Alexander, Jason S.; Garstang, Richard

    2012-01-01

    1. Many river dolphin populations are most vulnerable during the low-water season when habitat is limited. Indus River dolphin habitat selection in the dry season was investigated using Generalized Linear Models of dolphin distribution and abundance in relation to physical features of river geomorphology and channel geometry in cross-section. 2. Dolphins selected locations in the river with significantly greater mean depth, maximum depth, cross-sectional area, and hydraulic radius, and significantly narrower river width and a lower degree of braiding than areas where dolphins were absent. They were also recorded with higher frequency at river constrictions and at confluences. 3. Channel cross-sectional area was the most important factor affecting dolphin presence and abundance, with the area of water below 1 m in depth exerting the greatest influence. Indus dolphins avoided channels with small cross-sectional area (2), presumably owing to the risk of entrapment and reduced foraging opportunities. 4. Channel geometry had a greater ability to explain dolphin distribution than river geomorphology; however, both analyses indicated similar types of habitat selection. The dolphin–habitat relationships identified in the river geomorphology analysis were scale-dependent, indicating that dolphin distribution is driven by the occurrence of discrete small-scale features, such as confluences and constrictions, as well as by broader-scale habitat complexes. 5. There are numerous plans to impound or extract more water from the Indus River system. If low-water season flows are allowed to decrease further, the amount of deeper habitat will decline, there may be insufficient patches of suitable habitat to support the dolphin population through the low-water season, and dolphins may become isolated within deeper river sections, unable or unwilling to traverse through shallows between favourable patches of habitat.

  4. Mapping Thermal Habitat of Ectotherms Based on Behavioral Thermoregulation in a Controlled Thermal Environment

    Science.gov (United States)

    Fei, T.; Skidmore, A.; Liu, Y.

    2012-07-01

    Thermal environment is especially important to ectotherm because a lot of physiological functions rely on the body temperature such as thermoregulation. The so-called behavioural thermoregulation function made use of the heterogeneity of the thermal properties within an individual's habitat to sustain the animal's physiological processes. This function links the spatial utilization and distribution of individual ectotherm with the thermal properties of habitat (thermal habitat). In this study we modelled the relationship between the two by a spatial explicit model that simulates the movements of a lizard in a controlled environment. The model incorporates a lizard's transient body temperatures with a cellular automaton algorithm as a way to link the physiology knowledge of the animal with the spatial utilization of its microhabitat. On a larger spatial scale, 'thermal roughness' of the habitat was defined and used to predict the habitat occupancy of the target species. The results showed the habitat occupancy can be modelled by the cellular automaton based algorithm at a smaller scale, and can be modelled by the thermal roughness index at a larger scale.

  5. Genetic and epigenetic diversity and structure of Phragmites australis from local habitats of the Songnen Prairie using amplified fragment length polymorphism markers.

    Science.gov (United States)

    Qiu, T; Jiang, L L; Yang, Y F

    2016-08-19

    The genetic and epigenetic diversity and structure of naturally occurring Phragmites australis populations occupying two different habitats on a small spatial scale in the Songnen Prairie in northeastern China were investigated by assessing amplified fragment length polymorphisms (AFLPs) and methylation-sensitive amplified polymorphisms (MSAPs) through fluorescent capillary detection. The two groups of P. australis were located in a seasonal waterlogged low-lying and alkalized meadow with a pH of 8-8.5 and in an alkaline patch without accumulated rainwater and with a pH greater than 10. These groups showed high levels of genetic diversity at the habitat level based on the percentage of polymorphic bands (90.32, 82.56%), Nei's gene diversity index (0.262, 0.248), and the Shannon diversity index (0.407, 0.383). Although little is known about the between-habitat genetic differentiation of P. australis on a small spatial scale, our results implied significant genetic differentiation between habitats. Extensive epigenetic diversity within habitats, along with clear differentiation, was found. Specifically, the former habitat (Habitat 1, designated H1) harbored higher levels of genetic and epigenetic diversity than the latter (Habitat 2, designated H2), and population-level diversity was also high. This study represents one of few attempts to predict habitat-based genetic differentiation of reeds on a small scale. These assessments of genetic and epigenetic variation are integral aspects of molecular ecological studies on P. australis. Possible causes for within- and between-habitat genetic and epigenetic variations are discussed.

  6. Chinook salmon use of spawning patches: Relative roles of habitat quality, size, and connectivity

    Science.gov (United States)

    Isaak, D.J.; Thurow, R.F.; Rieman, B.E.; Dunham, J.B.

    2007-01-01

    Declines in many native fish populations have led to reassessments of management goals and shifted priorities from consumptive uses to species preservation. As management has shifted, relevant environmental characteristics have evolved from traditional metrics that described local habitat quality to characterizations of habitat size and connectivity. Despite the implications this shift has for how habitats may be prioritized for conservation, it has been rare to assess the relative importance of these habitat components. We used an information-theoretic approach to select the best models from sets of logistic regressions that linked habitat quality, size, and connectivity to the occurrence of chinook salmon (Oncorhynchus tshawytscha) nests. Spawning distributions were censused annually from 1995 to 2004, and data were complemented with field measurements that described habitat quality in 43 suitable spawning patches across a stream network that drained 1150 km 2 in central Idaho. Results indicated that the most plausible models were dominated by measures of habitat size and connectivity, whereas habitat quality was of minor importance. Connectivity was the strongest predictor of nest occurrence, but connectivity interacted with habitat size, which became relatively more important when populations were reduced. Comparison of observed nest distributions to null model predictions confirmed that the habitat size association was driven by a biological mechanism when populations were small, but this association may have been an area-related sampling artifact at higher abundances. The implications for habitat management are that the size and connectivity of existing habitat networks should be maintained whenever possible. In situations where habitat restoration is occurring, expansion of existing areas or creation of new habitats in key areas that increase connectivity may be beneficial. Information about habitat size and connectivity also could be used to strategically

  7. Habitat use and demography of Mus musculus in a rural landscape of Argentina.

    Science.gov (United States)

    León, Vanina A; Fraschina, Jimena; Guidobono, Juan S; Busch, Maria

    2013-04-01

    The main goal of the paper was to determine the habitat distribution of the house mouse (Mus musculus) within a rural landscape of Buenos Aires province, Argentina. We also studied the seasonal variation in abundance and reproductive activity. The habitats studied were poultry farms, human houses in a small village, cropfields, pastures, cropfield and pasture edges, riparian habitats (streams), railway embankments and woodlots. We captured 817 M. musculus and 690 individuals of 5 native rodent species. M. musculus was captured in poultry farms, houses, riparian habitats, cropfield and borders, but it showed a significantly higher abundance in poultry farms compared to the other habitats. Its presence outside poultry farms was significantly related to the distance to streams and poultry farms. The mean trapping success index of M. musculus did not show significant variations between periods, but the proportion of active males was significantly higher in the spring-summer period than in the autumn-winter period. All captures of M. musculus in cropfields, borders and riparian habitats occurred in the spring-summer period. The capture of M. musculus in many types of habitats suggests that it can disperse outside poultry farms, and streams may be used as corridors. © 2012 Wiley Publishing Asia Pty Ltd, ISZS and IOZ/CAS.

  8. Discovery of a new Kittlitz's murrelet nest: Clues to habitat selection and nest-site fidelity

    Science.gov (United States)

    Piatt, John F.; Naslund, Nancy L.; van Pelt, Thomas I.

    1999-01-01

    On 13 June 1993, a new Kittlitz's murrelet (Brachyramphus brevirostris) nest was discovered near Red Mountain on the Kenai Peninsula, Alaska. The nest was on a 22° slope at about 900 m elevation with a northeast aspect, and contained a 60.2 × 40.6 mm egg that weighed 49.0 g. Downy feathers and weathered fecal material found at the nest indicated re-use from a previous year, suggesting possible nest site fidelity. The nest was located in an area scoured by winds and free of snow during early spring, suggesting that this may be an important mesoscale factor influencing selection of nesting habitat. Proximity to suitable foraging habitat, particularly sheltered bays and glacial river outflows, may affect breeding habitat choice over larger spatial scales.

  9. Historical habitat connectivity affects current genetic structure in a grassland species.

    Science.gov (United States)

    Münzbergová, Z; Cousins, S A O; Herben, T; Plačková, I; Mildén, M; Ehrlén, J

    2013-01-01

    Many recent studies have explored the effects of present and past landscape structure on species distribution and diversity. However, we know little about the effects of past landscape structure on distribution of genetic diversity within and between populations of a single species. Here we describe the relationship between present and past landscape structure (landscape connectivity and habitat size estimated from historical maps) and current genetic structure in a perennial herb, Succisa pratensis. We used allozymes as co-dominant markers to estimate genetic diversity and deviation from Hardy-Weinberg equilibrium in 31 populations distributed within a 5 km(2) agricultural landscape. The results showed that current genetic diversity of populations was related to habitat suitability, habitat age, habitat size and habitat connectivity in the past. The effects of habitat age and past connectivity on genetic diversity were in most cases also significant after taking the current landscape structure into account. Moreover, current genetic similarity between populations was affected by past connectivity after accounting for current landscape structure. In both cases, the oldest time layer (1850) was the most informative. Most populations showed heterozygote excess, indicating disequilibrium due to recent gene flow or selection against homozygotes. These results suggest that habitat age and past connectivity are important determinants of distribution of genetic diversity between populations at a scale of a few kilometres. Landscape history may significantly contribute to our understanding of distribution of current genetic structure within species and the genetic structure may be used to better understand landscape history, even at a small scale. © 2012 German Botanical Society and The Royal Botanical Society of the Netherlands.

  10. Surface Habitat Systems

    Science.gov (United States)

    Kennedy, Kriss J.

    2009-01-01

    The Surface Habitat Systems (SHS) Focused Investment Group (FIG) is part of the National Aeronautics and Space Administration (NASA) Johnson Space Center (JSC) effort to provide a focused direction and funding to the various projects that are working on human surface habitat designs and technologies for the planetary exploration missions. The overall SHS-FIG effort focuses on directing and guiding those projects that: 1) develop and demonstrate new surface habitat system concepts, innovations, and technologies to support human exploration missions, 2) improve environmental systems that interact with human habitats, 3) handle and emplace human surface habitats, and 4) focus on supporting humans living and working in habitats on planetary surfaces. The activity areas of the SHS FIG described herein are focused on the surface habitat project near-term objectives as described in this document. The SHS-FIG effort focuses on mitigating surface habitat risks (as identified by the Lunar Surface Systems Project Office (LSSPO) Surface Habitat Element Team; and concentrates on developing surface habitat technologies as identified in the FY08 gap analysis. The surface habitat gap assessment will be updated annually as the surface architecture and surface habitat definition continues to mature. These technologies are mapped to the SHS-FIG Strategic Development Roadmap. The Roadmap will bring to light the areas where additional innovative efforts are needed to support the development of habitat concepts and designs and the development of new technologies to support of the LSSPO Habitation Element development plan. Three specific areas of development that address Lunar Architecture Team (LAT)-2 and Constellation Architecture Team (CxAT) Lunar habitat design issues or risks will be focused on by the SHS-FIG. The SHS-FIG will establish four areas of development that will help the projects prepare in their planning for surface habitat systems development. Those development areas are

  11. Riverine habitat dynamics

    Science.gov (United States)

    Jacobson, R.B.

    2013-01-01

    The physical habitat template is a fundamental influence on riverine ecosystem structure and function. Habitat dynamics refers to the variation in habitat through space and time as the result of varying discharge and varying geomorphology. Habitat dynamics can be assessed at spatial scales ranging from the grain (the smallest resolution at which an organism relates to its environment) to the extent (the broadest resolution inclusive of all space occupied during its life cycle). In addition to a potentially broad range of spatial scales, assessments of habitat dynamics may include dynamics of both occupied and nonoccupied habitat patches because of process interactions among patches. Temporal aspects of riverine habitat dynamics can be categorized into hydrodynamics and morphodynamics. Hydrodynamics refers to habitat variation that results from changes in discharge in the absence of significant change of channel morphology and at generally low sediment-transport rates. Hydrodynamic assessments are useful in cases of relatively high flow exceedance (percent of time a flow is equaled or exceeded) or high critical shear stress, conditions that are applicable in many studies of instream flows. Morphodynamics refers to habitat variation resulting from changes to substrate conditions or channel/floodplain morphology. Morphodynamic assessments are necessary when channel and floodplain boundary conditions have been significantly changed, generally by relatively rare flood events or in rivers with low critical shear stress. Morphodynamic habitat variation can be particularly important as disturbance mechanisms that mediate population growth or for providing conditions needed for reproduction, such as channel-migration events that erode cutbanks and provide new pointbar surfaces for germination of riparian trees. Understanding of habitat dynamics is increasing in importance as societal goals shift toward restoration of riverine ecosystems. Effective investment in restoration

  12. Assessment and management of dead-wood habitat

    Science.gov (United States)

    Hagar, Joan

    2007-01-01

    The Bureau of Land Management (BLM) is in the process of revising its resource management plans for six districts in western and southern Oregon as the result of the settlement of a lawsuit brought by the American Forest Resource Council. A range of management alternatives is being considered and evaluated including at least one that will minimize reserves on O&C lands. In order to develop the bases for evaluating management alternatives, the agency needs to derive a reasonable range of objectives for key issues and resources. Dead-wood habitat for wildlife has been identified as a key resource for which decision-making tools and techniques need to be refined and clarified. Under the Northwest Forest Plan, reserves were to play an important role in providing habitat for species associated with dead wood (U.S. Department of Agriculture Forest Service and U.S. Department of the Interior Bureau of Land Management, 1994). Thus, the BLM needs to: 1) address the question of how dead wood will be provided if reserves are not included as a management strategy in the revised Resource Management Plan, and 2) be able to evaluate the effects of alternative land management approaches. Dead wood has become an increasingly important conservation issue in managed forests, as awareness of its function in providing wildlife habitat and in basic ecological processes has dramatically increased over the last several decades (Laudenslayer et al., 2002). A major concern of forest managers is providing dead wood habitat for terrestrial wildlife. Wildlife in Pacific Northwest forests have evolved with disturbances that create large amounts of dead wood; so, it is not surprising that many species are closely associated with standing (snags) or down, dead wood. In general, the occurrence or abundance of one-quarter to one-third of forest-dwelling vertebrate wildlife species, is strongly associated with availability of suitable dead-wood habitat (Bunnell et al., 1999; Rose et al., 2001). In

  13. Loss and modification of habitat: Chapter 1

    Science.gov (United States)

    Lemckert, Francis; Hecnar, Stephen; Pilliod, David S.

    2012-01-01

    Amphibians live in a wide variety of habitats around the world, many of which have been modified or destroyed by human activities. Most species have unique life history characteristics adapted to specific climates, habitats (e.g., lentic, lotic, terrestrial, arboreal, fossorial, amphibious), and local conditions that provide suitable areas for reproduction, development and growth, shelter from environmental extremes, and predation, as well as connectivity to other populations or habitats. Although some species are entirely aquatic or terrestrial, most amphibians, as their name implies, lead a dual life and require a mosaic of habitats in both aquatic and terrestrial ecosystems. With over 6 billion people on Earth, most species are now persisting in habitats that have been directly or indirectly influenced by human activities. Some species have disappeared where their habitats have been completely destroyed, reduced, or rendered unsuitable. Habitat loss and degradation are widely considered by most researchers as the most important causes of amphibian population decline globally (Barinaga 1990; Wake and Morowitz 1991; Alford and Richards 1999). In this chapter, a background on the diverse habitat requirements of amphibians is provided, followed by a discussion of the effects of urbanization, agriculture, livestock grazing, timber production and harvesting, fire and hazardous fuel management, and roads on amphibians and their habitats. Also briefly discussed is the influence on amphibian habitats of natural disturbances, such as extreme weather events and climate change, given the potential for human activities to impact climate in the longer term. For amphibians in general, microhabitats are of greater importance than for other vertebrates. As ectotherms with a skin that is permeable to water and with naked gelatinous eggs, amphibians are physiologically constrained to be active during environmental conditions that provide appropriate body temperatures and adequate

  14. Nesting Habitat Suitability for Olive Ridley Turtles (Lepidochelys Olivacea) at the Gahirmatha Rookery, Odisha Coast of India

    OpenAIRE

    Satyaranjan BEHERA; Basudev TRIPATHY; Kupuswamy SIVAKUMAR; Binod Chandra CHOUDHURY; Chandrasekhar KAR

    2013-01-01

    The changes in the beach dynamics at Gahirmatha sea turtle rookery along Odisha coast of India have forced the olive ridley turtles to nests in a non-conducive environment. In the recent past, non-availability of nesting beach due to erosion was hypothesized to be one of the major reasons for non-occurrence of arribada at Gahirmatha. This paper reviews the current status of nesting habitat for olive ridley turtles at Gahirmatha and suggests onshore and offshore developmental activities close ...

  15. Oxygen deficiency impacts on burying habitats for lesser sandeel, Ammodytes tobianus, in the inner Danish waters

    DEFF Research Database (Denmark)

    Behrens, Jane; Ærtebjerg, Gunni; Petersen, Jens Kjerulf

    2009-01-01

    Starting in 1980s, the inner Danish waters have yearly been exposed to seasonal oxygen deficiency (hypoxia). Through spatial–temporal interpolation of monitoring data (1998–2005), we investigated oxygen deficiency impacts on suitable burying habitats for lesser sandeel (Ammodytes tobianus...

  16. A study on the carrying capacity of the available habitat for the Rhinopithecus bieti population at Mt. Laojun in Yunnan, China.

    Science.gov (United States)

    Li, Li; Yu, Shixiao; Ren, Baoping; Li, Ming; Wu, Ruidong; Long, Yongcheng

    2009-06-01

    The Yunnan snub-nosed monkey is one of the most endangered primates in the world. It is experiencing a range of ongoing threats and the persisting effects of past disturbances. The prospects for this species are not very optimistic because habitat corridors are severely damaged by logging, grazing, and mining. Each group of the monkeys in different areas is facing a unique variety of threats. Based on genetic analysis, Rhinopithecus bieti should be separated into three management units for conservation, of which the Mt. Laojun management unit involves the most endangered primates. Despite the fact that the vegetation on Mt. Laojun is in a relatively pristine state, only two groups of monkeys, of a total of fewer than 300, survive in the area. With this paper, we aimed to address the capacity of the monkeys' habitat at the study site and the possible reasons for the small populations. Rapid ecological assessment based on a SPOT 5 image and field survey was used to simulate the vegetation of the whole area based on reference ecological factors of the GIS system. The vegetation map of the site was thus derived from this simulation. Based on the previous studies, the three vegetation types were identified as the suitable habitat of the monkeys. The confusion matrix-based field GPS points were applied to analyze the precision of the habitat map. Based on the map of suitable habitat of the monkeys, the utilization of the habitat and the carrying capacity were analyzed in the GIS. The confusion matrix-based field GPS points were applied to the habitat analysis process, and it was found that the habitat map was 81.3% precise. Then, with the current habitat map, we found that the mixed forest currently used by the monkeys is only a very small fraction (2.65%) of the overall potential habitat of the population, while the dark conifer forest is 4.09%. Poaching is the greatest short-term threat to this species, particularly in the southern range where local residents have a

  17. Comparison of intestinal microbiota and activities of digestive and immune-related enzymes of sea cucumber Apostichopus japonicus in two habitats

    Science.gov (United States)

    Wang, Qi; Zhang, Xiumei; Chen, Muyan; Li, Wentao; Zhang, Peidong

    2017-09-01

    Sea cucumber Apostichopus japonicus stock enhancement by releasing hatchery-produced seeds is a management tool used to recover its population under natural environmental conditions. To assess the suitability of releasing sites, we examined the microbiota of the gut contents of A. japonicus from two populations (one in sandy-muddy seagrass beds and one in rocky intertidal reefs) and the microbiota in their surrounding sediments. The activities of digestive and immune-related enzymes in the A. japonicus were also examined. The results indicated that higher bacterial richness and Shannon diversity index were observed in all the seagrass-bed samples. There were significant differences in intestinal and sediment microorganisms between the two habitats, with a 2.87 times higher abundance of Firmicutes in the seagrass bed sediments than that in the reefs. Meanwhile, Bacteroidetes and Actinobacteria were significantly higher abundant in the gut content of A. japonicus from seagrass bed than those from the reefs. In addition, the seagrass-bed samples exhibited a relatively higher abundance of potential probiotics. Principal coordinates analysis and heatmap showed the bacterial communities were classified into two groups corresponding to the two habitat types. Moreover, compared to A. japonicus obtained from rocky intertidal habitat, those obtained from the seagrass bed showed higher lysozyme, superoxide dismutase and protease activities. Our results suggest that bacterial communities present in seagrass beds might enhance the digestive function and immunity of A. japonicus. Therefore, compared with the rocky intertidal reef, seagrass bed seems to be more beneficial for the survival of A. japonicus.

  18. Habitat quality assessment for the Eurasian otter (Lutra lutra on the river Jajrood, Iran

    Directory of Open Access Journals (Sweden)

    Roohallah Mirzaei

    2010-06-01

    Full Text Available Abstract There is little information about the status and ecology of the Eurasian otter (Lutra lutra in Iran. We assessed the habitat suitability for otters of the River Jajrood, Tehran province, measuring, or visually estimating, 12 environmental parameters along 16 600 m long river stretches (sampling sites. The downstream stretches of the river were found to be more suitable for otters with respect to the upper part of its course. Although the assessments of habitat suitability for the otter may be affected by several limits, the current distribution of the species on the river agrees with the results of this study. The preservation of the otter in Tehran province should involve the restoration of the ecosystem of the River Jajrood in order to improve the length of suitable river stretches.
    Riassunto Stima dell’idoneità ambientale per la lontra (Lutra lutra del fiume Jajrood, Iran. Le informazioni relative alla lontra (Lutra lutra in Iran sono scarse. L’idoneità ambientale per la specie del fiume Jajrood, provincia di Tehran, è stata valutata, misurando o stimando 12 parametri ambientali lungo 16 stazioni di campionamento, coincidenti con tratti di fiume della lunghezza di 600 m. I tratti più a valle sono risultati più idonei rispetto al corso superiore del fiume. Malgrado i numerosi limiti del metodo di stima dell’idoneità ambientale adottato, i risultati sono in accordo con l’attuale distribuzione della lontra lungo il fiume Jajrood. La conservazione della lontra nella provincia di Tehran dovrebbe prevedere miglioramenti ambientali volti a incrementare lo sviluppo lineare degli habitat idonei lungo il fiume Jajrood.

    doi:10.4404/hystrix-20.2-4447

  19. Tamarix as habitat for birds: Implications for riparian restoration in the Southwestern United States

    Science.gov (United States)

    Sogge, M.K.; Sferra, S.J.; Paxton, E.H.

    2008-01-01

    Exotic vegetation has become a major habitat component in many ecosystems around the world, sometimes dramatically changing the vegetation community structure and composition. In the southwestern United States, riparian ecosystems are undergoing major changes in part due to the establishment and spread of the exotic Tamarix (saltcedar, tamarisk). There are concerns about the suitability of Tamarix as habitat for birds. Although Tamarix habitats tend to support fewer species and individuals than native habitats, Arizona Breeding Bird Atlas data and Birds of North America accounts show that 49 species use Tamarix as breeding habitat. Importantly, the relative use of Tamarix and its quality as habitat vary substantially by geographic location and bird species. Few studies have examined how breeding in Tamarix actually affects bird survivorship and productivity; recent research on Southwestern Willow Flycatchers has found no negative effects from breeding in Tamarix habitats. Therefore, the ecological benefits and costs of Tamarix control are difficult to predict and are likely to be species specific and site specific. Given the likelihood that high-quality native riparian vegetation will not develop at all Tamarix control sites, restoration projects that remove Tamarix but do not assure replacement by high-quality native habitat have the potential to reduce the net riparian habitat value for some local or regional bird populations. Therefore, an assessment of potential negative impacts is important in deciding if exotic control should be conducted. In addition, measurable project objectives, appropriate control and restoration techniques, and robust monitoring are all critical to effective restoration planning and execution. ?? 2008 Society for Ecological Restoration International.

  20. Effects of hurricanes Katrina and Rita on Louisiana black bear habitat

    Science.gov (United States)

    Clark, Joseph D.; Murrow, Jennifer L.

    2012-01-01

    The Louisiana black bear (Ursus americanus luteolus) is comprised of 3 subpopulations, each being small, geographically isolated, and vulnerable to extinction. Hurricanes Katrina and Rita struck the Louisiana and Mississippi coasts in 2005, potentially altering habitat occupied by this federally threatened subspecies. We used data collected on radio-telemetered bears from 1993 to 1995 and pre-hurricane landscape data to develop a habitat model based on the Mahalanobis distance (D2) statistic. We then applied that model to post-hurricane landscape data where the telemetry data were collected (i.e., occupied study area) and where bear range expansion might occur (i.e., unoccupied study area) to quantify habitat loss or gain. The D2 model indicated that quality bear habitat was associated with areas of high mast-producing forest density, low water body density, and moderate forest patchiness. Cross-validation and testing on an independent data set in central Louisiana indicated that prediction and transferability of the model were good. Suitable bear habitat decreased from 348 to 345 km2 (0.9%) within the occupied study area and decreased from 34,383 to 33,891 km2 (1.4%) in the unoccupied study area following the hurricanes. Our analysis indicated that bear habitat was not significantly degraded by the hurricanes, although changes that could have occurred on a microhabitat level would be more difficult to detect at the resolution we used. We suggest that managers continue to monitor the possible long-term effects of these hurricanes (e.g., vegetation changes from flooding, introduction of toxic chemicals, or water quality changes).

  1. Incorporation of habitat information in the development of indices of larval bluefin tuna (Thunnus thynnus) in the Western Mediterranean Sea (2001-2005 and 2012-2013)

    Science.gov (United States)

    Ingram, G. Walter; Alvarez-Berastegui, Diego; Reglero, Patricia; Balbín, Rosa; García, Alberto; Alemany, Francisco

    2017-06-01

    Fishery independent indices of bluefin tuna larvae in the Western Mediterranean Sea are presented utilizing ichthyoplankton survey data collected from 2001 through 2005 and 2012 through 2013. Indices were developed using larval catch rates collected using two different types of bongo sampling, by first standardizing catch rates by gear/fishing-style and then employing a delta-lognormal modeling approach. The delta-lognormal models were developed three ways: 1) a basic larval index including the following covariates: time of day, a systematic geographic area variable, month and year; 2) a standard environmental larval index including the following covariates: mean water temperature over the mixed layer depth, mean salinity over the mixed layer depth, geostrophic velocity, time of day, a systematic geographic area variable, month and year; and 3) a habitat-adjusted larval index including the following covariates: a potential habitat variable, time of day, a systematic geographic area variable, month and year. Results indicated that all three model-types had similar precision in index values. However, the habitat-adjusted larval index demonstrated a high correlation with estimates of spawning stock biomass from the previous stock assessment model, and, therefore, is recommended as a tuning index in future stock assessment models.

  2. Multimetric index for assessing ecological condition of running waters in the upper reaches of the Piabanha-Paquequer-Preto Basin, Rio de Janeiro, Brazil

    Directory of Open Access Journals (Sweden)

    Darcilio F. Baptista

    2011-10-01

    Full Text Available The objective of this study was to develop a rapid multimetric index using benthic macrofauna as bioindicators of ecological conditions for the upper reaches of the Piabanha-Paquequer-Preto Basin located in the state of Rio de Janeiro, Brazil. A total of 33698 macroinvertebrates were collected in 27 sites. Benthic macroinvertebrates were sampled using the multi-habitat method that consists in sampling 20 m² of substrate collected in approximate proportion to the representation of all major habitat types in the reach. A subsampling procedure was used. The main steps followed to develop and test the index were: exclusion of unsuitable metrics using box-whisker plots, considering the degree of overlapping among interquartile limits (1º-3º and confirmed by Mann-Whitney U test (p < 0.05 using six reference rivers and six impaired rivers. From all the candidate potential metrics, 36 were considered suitable. After identifying redundant metrics, through Spearman correlation analysis, and considering practical application criteria, six core metrics were selected to compose the Piabanha-Paquequer-Preto Multimetric Index (PPPMI using the continuous method: Family richness, Shannon-Wiener family diversity, EPT family richness, %Diptera, %MOLD (Mollusca + Diptera and %Collectors. The sensitivity of the index was tested in 15 rivers using a Principal Components Analysis (PCA of the six environmental variables. The first axis of the PCA was highly correlated to the PPPMI scores (r = 0.703, p < 0.001. The PPPMI responded to a set of environmental variables associated to a gradient of human disturbance affecting the ecological condition of the waterbodies. This indicates that the PPPMI is an effective tool for biological monitoring and decision making in the hydrographic region of the Piabanha-Paquequer-Preto rivers.

  3. The integration of bioclimatic indices in an objective probabilistic model for establishing and mapping viticulture suitability in a region

    Science.gov (United States)

    Moral García, Francisco J.; Rebollo, Francisco J.; Paniagua, Luis L.; García, Abelardo

    2014-05-01

    Different bioclimatic indices have been proposed to determine the wine suitability in a region. Some of them are related to the air temperature, but the hydric component of climate should also be considered which, in turn, is influenced by the precipitation during the different stages of the grapevine growing and ripening periods. In this work we propose using the information obtained from 10 bioclimatic indices and variables (heliothermal index, HI, cool night index, CI, dryness index, DI, growing season temperature, GST, the Winkler index, WI, September mean thermal amplitude, MTA, annual precipitation, AP, precipitation during flowering, PDF, precipitation before flowering, PBF, and summer precipitation, SP) as inputs in an objective and probabilistic model, the Rasch model, with the aim of integrating the individual effects of them, obtaining the climate data that summarize all main bioclimatic indices which could influence on wine suitability, and utilize the Rasch measures to generate homogeneous climatic zones. The use of the Rasch model to estimate viticultural suitability constitutes a new application of great practical importance, enabling to rationally determine locations in a region where high viticultural potential exists and establishing a ranking of the bioclimatic indices or variables which exerts an important influence on wine suitability in a region. Furthermore, from the measures of viticultural suitability at some locations, estimates can be computed using a geostatistical algorithm, and these estimates can be utilized to map viticultural suitability potential in a region. To illustrate the process, an application to Extremadura, southewestern Spain, is shown. Keywords: Rasch model, bioclimatic indices, GIS.

  4. Habitat-related specialization of lateral-line system morphology in a habitat-generalist and a habitat-specialist New Zealand eleotrid.

    Science.gov (United States)

    Vanderpham, J P; Nakagawa, S; Senior, A M; Closs, G P

    2016-04-01

    An investigation of intraspecific habitat-related patterns of variation in oculoscapular lateral-line superficial neuromasts (SN) identified a decrease in the ratio of total SNs to pores, and a trend towards decreased asymmetry in SNs in the habitat-generalist common bully Gobiomorphus cotidianus from fluvial habitats compared to lacustrine habitats, suggesting habitat-related phenotypic variability. A greater ratio of pores to SNs, as well as less variation in the total number and asymmetry of SNs observed in the fluvial habitat-specialist redfin bully Gobiomorphus huttoni may provide further evidence of variations in the oculoscapular lateral-line morphology of fluvial habitat G. cotidianus individuals serving as adaptations to more turbulent environments. © 2016 The Fisheries Society of the British Isles.

  5. Multi–criteria evaluation and simulated annealing for delimiting high priority habitats of Alectoris chukar and Phasianus colchicus in Iran

    Directory of Open Access Journals (Sweden)

    Momeni Dehaghi, I.

    2018-01-01

    Full Text Available Habitat degradation and hunting are among the most important causes of population decline for Alectoris chukar and Phasianus colchicus, two of the most threatened game species in the Golestan Province of Iran. Limited data on distribution and location of high–quality habitats for the two species make conservation efforts more difficult in the province. We used multi–criteria evaluation (MCE as a coarse–filter approach to refine the general distribution areas into habitat suitability maps for the species. We then used these maps as input to simulated annealing as a heuristic algorithm through Marxan in order to prioritize areas for conservation of the two species. To find the optimal solution, we tested various boundary length modifier (BLM values in the simulated annealing process. Our results showed that the MCE approach was useful to refine general habitat maps. Assessment of the selected reserves confirmed the suitability of the selected areas (mainly neighboring the current reserves making their management easier and more feasible. The total area of the selected reserves was about 476 km2. As current reserves of the Golestan Province represent only 23 % of the optimal area, further protected areas should be considered to efficiently conserve these two species.

  6. Floral and nesting resources, habitat structure, and fire influence bee distribution across an open-forest gradient

    Science.gov (United States)

    Grundel, R.; Jean, R.P.; Frohnapple, K.J.; Glowacki, G.A.; Scott, P.E.; Pavlovic, N.B.

    2010-01-01

    Given bees' central effect on vegetation communities, it is important to understand how and why bee distributions vary across ecological gradients. We examined how plant community composition, plant diversity, nesting suitability, canopy cover, land use, and fire history affected bee distribution across an open-forest gradient in northwest Indiana, USA, a gradient similar to the historic Midwest United States landscape mosaic. When considered with the other predictors, plant community composition was not a significant predictor of bee community composition. Bee abundance was negatively related to canopy cover and positively to recent fire frequency, bee richness was positively related to plant richness and abundance of potential nesting resources, and bee community composition was significantly related to plant richness, soil characteristics potentially related to nesting suitability, and canopy cover. Thus, bee abundance was predicted by a different set of environmental characteristics than was bee species richness, and bee community composition was predicted, in large part, by a combination of the significant predictors of bee abundance and richness. Differences in bee community composition along the woody vegetation gradient were correlated with relative abundance of oligolectic, or diet specialist, bees. Because oligoleges were rarer than diet generalists and were associated with open habitats, their populations may be especially affected by degradation of open habitats. More habitat-specialist bees were documented for open and forest/scrub habitats than for savanna/woodland habitats, consistent with bees responding to habitats of intermediate woody vegetation density, such as savannas, as ecotones rather than as distinct habitat types. Similarity of bee community composition, similarity of bee abundance, and similarity of bee richness between sites were not significantly related to proximity of sites to each other. Nestedness analysis indicated that species

  7. Characterization and Monitoring Data for Evaluating Constructed Emergent Sandbar Habitat in the Missouri River Mainstem

    Energy Technology Data Exchange (ETDEWEB)

    Duberstein, Corey A.; Downs, Janelle L.

    2008-11-06

    Emergent sandbar habitat (ESH) in the Missouri River Mainstem System is a critical habitat element for several federally listed bird species: the endangered interior least tern (Sterna antillarum) and the threatened Northern Great Plains piping plover (Charadrius melodus). The Army Corps of Engineers (Corps) provides the primary operational management of the Missouri River and is responsible under the Endangered Species Act (ESA) to take actions within its authorities to conserve listed species. To comply with the 2000 USFWS BiOp and the 2003 amended USFWS BiOp, the Corps has created habitats below Gavins Point Dam using mechanical means. Initial monitoring indicates that constructed sandbars provide suitable habitat features for nesting and foraging least terns and piping plovers. Terns and plovers are using constructed sandbars and successfully reproducing at or above levels stipulated in the BiOp. However, whether such positive impacts will persist cannot yet be adequately assessed at this time.

  8. Rigor index, fillet yield and proximate composition of cultured striped catfish (Pangasianodon hypophthalmus for its suitability in processing industries in Bangladesh

    Directory of Open Access Journals (Sweden)

    Salma Noor-E Islami

    2014-12-01

    Full Text Available Rigor-index in market-size striped catfish (Pangasianodon hypophthalmus, locally called Thai-Pangas was determined to assess fillet yield for production of value-added products. In whole fish, rigor started within 1 hr after death under both iced and room temperature conditions while rigor-index reached a maximum of 72.23% within 8 hr and 85.5% within 5 hr at room temperature and iced condition, respectively, which was fully relaxed after 22 hr under both storage conditions. Post-mortem muscle pH decreased to 6.8 after 2 hr, 6.2 after 8 hr and sharp increase to 6.9 after 9 hr. There was a positive correlation between rigor progress and pH shift in fish fillets. Hand filleting was done post-rigor and fillet yield experiment showed 50.4±2.1% fillet, 8.0±0.2% viscera, 8.0±1.3% skin and 32.0±3.2% carcass could be obtained from Thai-Pangas. Proximate composition analysis of four regions of Thai-Pangas viz., head region, middle region, tail region and viscera revealed moisture 78.36%, 81.14%, 81.45% and 57.33%; protein 15.83%, 15.97%, 16.14% and 17.20%; lipid 4.61%, 1.82%, 1.32% and 24.31% and ash 1.09%, 0.96%, 0.95% and 0.86%, respectively indicating suitability of Thai-Pangas for production of value-added products such as fish fillets.

  9. Wanaket Wildlife Area Management Plan : Five-Year Plan for Protecting, Enhancing, and Mitigating Wildlife Habitat Losses for the McNary Hydroelectric Facility.

    Energy Technology Data Exchange (ETDEWEB)

    Confederated Tribes of the Umatilla Indian Reservation Wildlife Program

    2001-09-01

    The Confederated Tribes of the Umatilla Indian Reservation (CTUIR) propose to continue to protect, enhance, and mitigate wildlife and wildlife habitat at the Wanaket Wildlife Area. The Wanaket Wildlife Area was approved as a Columbia River Basin Wildlife Mitigation Project by the Bonneville Power Administration (BPA) and Northwest Power Planning Council (NWPPC) in 1993. This management plan will provide an update of the original management plan approved by BPA in 1995. Wanaket will contribute towards meeting BPA's obligation to compensate for wildlife habitat losses resulting from the construction of the McNary Hydroelectric facility on the Columbia River. By funding the enhancement and operation and maintenance of the Wanaket Wildlife Area, BPA will receive credit towards their mitigation debt. The purpose of the Wanaket Wildlife Area management plan update is to provide programmatic and site-specific standards and guidelines on how the Wanaket Wildlife Area will be managed over the next five years. This plan provides overall guidance on both short and long term activities that will move the area towards the goals, objectives, and desired future conditions for the planning area. The plan will incorporate managed and protected wildlife and wildlife habitat, including operations and maintenance, enhancements, and access and travel management. Specific project objectives are related to protection and enhancement of wildlife habitats and are expressed in terms of habitat units (HU's). Habitat units were developed by the US Fish and Wildlife Service's Habitat Evaluation Procedures (HEP), and are designed to track habitat gains and/or losses associated with mitigation and/or development projects. Habitat Units for a given species are a product of habitat quantity (expressed in acres) and habitat quality estimates. Habitat quality estimates are developed using Habitat Suitability Indices (HSI). These indices are based on quantifiable habitat features such

  10. Identifying Impacts of Hydropower Regulation on Salmonid Habitats to Guide River Restoration for Existing Schemes and Mitigate Adverse Effects of Future Developments

    Science.gov (United States)

    Buddendorf, B.; Geris, J.; Malcolm, I.; Wilkinson, M.; Soulsby, C.

    2015-12-01

    A decrease in longitudinal connectivity in riverine ecosystems resulting from the construction of transverse barriers has been identified as a major threat to biodiversity. For example, Atlantic Salmon (Salmo salar) have a seasonal variety of hydraulic habitat requirements for their different life stages. However, hydropower impoundments impact the spatial and temporal connectivity of natural habitat along many salmon rivers in ways that are not fully understood. Yet, these changes may affect the sustainability of habitat at local and regional scales and so ultimately the conservation of the species. Research is therefore needed both to aid the restoration and management of rivers impacted by previous hydropower development and guide new schemes to mitigate potentially adverse effects. To this end we assessed the effects of hydropower development on the flow related habitat conditions for different salmon life stages in Scottish rivers at different spatial scales. We used GIS techniques to map the changes in structural connectivity at regional scales, applying a weighting for habitat quality. Next, we used hydrological models to simulate past and present hydrologic conditions that in turn drive reach-scale hydraulic models to assess the impacts of regulation on habitat suitability in both space and time. Preliminary results indicate that: 1) impacts on connectivity depend on the location of the barrier within the river network; 2) multiple smaller barriers may have a potentially lower impact than a single larger barrier; 3) there is a relationship between habitat and connectivity where losing less but more suitable habitat potentially has a disproportionally large impact; 4) the impact of flow regulation can lead to a deterioration of habitat quality, though the effects are spatially variable and the extent of the impact depends on salmon life stage. This work can form a basis for using natural processes to perform targeted and cost-effective restoration of rivers.

  11. Land-use change reduces habitat suitability for supporting managed honey bee colonies in the Northern Great Plains

    Science.gov (United States)

    Otto, Clint R.; Roth, Cali; Carlson, Benjamin; Smart, Matthew

    2016-01-01

    Human reliance on insect pollination services continues to increase even as pollinator populations exhibit global declines. Increased commodity crop prices and federal subsidies for biofuel crops, such as corn and soybeans, have contributed to rapid land-use change in the US Northern Great Plains (NGP), changes that may jeopardize habitat for honey bees in a part of the country that supports >40% of the US colony stock. We investigated changes in biofuel crop production and grassland land covers surrounding ∼18,000 registered commercial apiaries in North and South Dakota from 2006 to 2014. We then developed habitat selection models to identify remotely sensed land-cover and land-use features that influence apiary site selection by Dakota beekeepers. Our study demonstrates a continual increase in biofuel crops, totaling 1.2 Mha, around registered apiary locations in North and South Dakota. Such crops were avoided by commercial beekeepers when selecting apiary sites in this region. Furthermore, our analysis reveals how grasslands that beekeepers target when selecting commercial apiary locations are becoming less common in eastern North and South Dakota, changes that may have lasting impact on pollinator conservation efforts. Our study highlights how land-use change in the NGP is altering the landscape in ways that are seemingly less conducive to beekeeping. Our models can be used to guide future conservation efforts highlighted in the US national pollinator health strategy by identifying areas that support high densities of commercial apiaries and that have exhibited significant land-use changes.

  12. Implications of Fine-Grained Habitat Fragmentation and Road Mortality for Jaguar Conservation in the Atlantic Forest, Brazil.

    Directory of Open Access Journals (Sweden)

    Laury Cullen

    Full Text Available Jaguar (Panthera onca populations in the Upper Paraná River, in the Brazilian Atlantic Forest region, live in a landscape that includes highly fragmented areas as well as relatively intact ones. We developed a model of jaguar habitat suitability in this region, and based on this habitat model, we developed a spatially structured metapopulation model of the jaguar populations in this area to analyze their viability, the potential impact of road mortality on the populations' persistence, and the interaction between road mortality and habitat fragmentation. In more highly fragmented populations, density of jaguars per unit area is lower and density of roads per jaguar is higher. The populations with the most fragmented habitat were predicted to have much lower persistence in the next 100 years when the model included no dispersal, indicating that the persistence of these populations are dependent to a large extent on dispersal from other populations. This, in turn, indicates that the interaction between road mortality and habitat fragmentation may lead to source-sink dynamics, whereby populations with highly fragmented habitat are maintained only by dispersal from populations with less fragmented habitat. This study demonstrates the utility of linking habitat and demographic models in assessing impacts on species living in fragmented landscapes.

  13. Implications of Fine-Grained Habitat Fragmentation and Road Mortality for Jaguar Conservation in the Atlantic Forest, Brazil.

    Science.gov (United States)

    Cullen, Laury; Stanton, Jessica C; Lima, Fernando; Uezu, Alexandre; Perilli, Miriam L L; Akçakaya, H Reşit

    2016-01-01

    Jaguar (Panthera onca) populations in the Upper Paraná River, in the Brazilian Atlantic Forest region, live in a landscape that includes highly fragmented areas as well as relatively intact ones. We developed a model of jaguar habitat suitability in this region, and based on this habitat model, we developed a spatially structured metapopulation model of the jaguar populations in this area to analyze their viability, the potential impact of road mortality on the populations' persistence, and the interaction between road mortality and habitat fragmentation. In more highly fragmented populations, density of jaguars per unit area is lower and density of roads per jaguar is higher. The populations with the most fragmented habitat were predicted to have much lower persistence in the next 100 years when the model included no dispersal, indicating that the persistence of these populations are dependent to a large extent on dispersal from other populations. This, in turn, indicates that the interaction between road mortality and habitat fragmentation may lead to source-sink dynamics, whereby populations with highly fragmented habitat are maintained only by dispersal from populations with less fragmented habitat. This study demonstrates the utility of linking habitat and demographic models in assessing impacts on species living in fragmented landscapes.

  14. Assessment of Shallow-Water Habitat Availability in Modified Dike Structures, Lower Missouri River, 2004

    Science.gov (United States)

    Jacobson, Robert B.; Elliott, Caroline M.; Johnson, Harold E.

    2004-01-01

    This study documented the effects of wing-dike notching on the availabilit of shallow water habitat in the Lower Missouri River. Five wing dikes were surveyed in late May 2004 after they were notched in early May as part of shallow-water habitat (SWH) rehabilitation activities undertaken by the U.S. Army Corps of Engineers. Surveys included high-resolution hydroacoustic depth, velocity, and substrate mapping. Relations of bottom elevations within the wing dike fields to index discharges and water-surface elevations indicate that little habitat meeting the SWH definition was created immediately following notching. This result is not unexpected, as significant geomorphic adjustment may require large flow events. Depth, velocity, and substrate measurements in the post-rehabilitation time period provide baseline data for monitoring ongoing changes. Differences in elevation and substrate were noted at all sites. Most dike fields showed substantial aggradation and replacement of mud substrate with sandier sediment, although the changes did not result in increased availability of SWH at the index discharge. It is not known how much of the elevation and substrate changes can be attributed directly to notching and how much would result from normal sediment transport variation.

  15. Construction of a GeogDetector-based model system to indicate the potential occurrence of grasshoppers in Inner Mongolia steppe habitats.

    Science.gov (United States)

    Shen, J; Zhang, N; Gexigeduren; He, B; Liu, C-Y; Li, Y; Zhang, H-Y; Chen, X-Y; Lin, H

    2015-06-01

    Grasshopper plagues have seriously disturbed grassland ecosystems in Inner Mongolia, China. The accurate prediction of grasshopper infestations and control of grasshopper plagues have become urgent needs. We sampled 234, 342, 335, and 369 plots in Xianghuangqi County of Xilingol League in 2010, 2011, 2012, and 2013, respectively, and measured the density of the most dominant grasshopper species, Oedaleus decorus asiaticus, and the latitude, longitude, and associated relatively stable habitat factors at each plot. We used Excel-GeogDetector software to explore the effects of individual habitat factors and the two-factor interactions on grasshopper density. We estimated the membership of each grasshopper density rank and determined the weights of each habitat category. These results were used to construct a model system evaluating grasshopper habitat suitability. The results showed that our evaluation system was reliable and the fuzzy evaluation scores of grasshopper habitat suitability were good indicators of potential occurrence of grasshoppers. The effects of the two-factor interactions on grasshopper density were greater than the effects of any individual factors. O. d. asiaticus was most likely to be found at elevations of 1300-1400 m, flat terrain or slopes of 4-6°, typical chestnut soil with 70-80% sand content in the top 5 cm of soil, and medium-coverage grassland. The species preferred temperate bunchgrass steppe dominated by Stipa krylovii and Cleistogenes squarrosa. These findings may be used to improve models to predict grasshopper occurrence and to develop management guidelines to control grasshopper plagues by changing habitats.

  16. Land suitability for waste disposal in metropolitan areas.

    Science.gov (United States)

    Baiocchi, Valerio; Lelo, Keti; Polettini, Alessandra; Pomi, Raffaella

    2014-08-01

    Site selection for waste disposal is a complex task that should meet the requirements of communities and stakeholders. In this article, three decision support methods (Boolean logic, index overlay and fuzzy gamma) are used to perform land suitability analysis for landfill siting. The study was carried out in one of the biggest metropolitan regions of Italy, with the objective of locating suitable areas for waste disposal. Physical and socio-economic information criteria for site selection were decided by a multidisciplinary group of experts, according to state-of-the-art guidelines, national legislation and local normative on waste management. The geographic information systems (GIS) based models used in this study are easy to apply but require adequate selection of criteria and weights and a careful evaluation of the results. The methodology is arranged in three steps, reflecting the criteria defined by national legislation on waste management: definition of factors that exclude location of landfills or waste treatment plants; classification of the remaining areas in terms of suitability for landfilling; and evaluation of suitable sites in relation to preferential siting factors (such as the presence of quarries or dismissed plants). The results showed that more than 80% of the provincial territory falls within constraint areas and the remaining territory is suitable for waste disposal for 0.72% or 1.93%, according to the model. The larger and most suitable sites are located in peripheral areas of the metropolitan system. The proposed approach represents a low-cost and expeditious alternative to support the spatial decision-making process. © The Author(s) 2014.

  17. Shading by Napier grass reduces malaria vector larvae in natural habitats in western Kenya highlands

    NARCIS (Netherlands)

    Wamae, P.M.; Githeko, A.K.; Menya, D.M.; Takken, W.

    2010-01-01

    Increased human population in the Western Kenya highlands has led to reclamation of natural swamps resulting in the creation of habitats suitable for the breeding of Anopheles gambiae, the major malaria vector in the region. Here we report on a study to restore the reclaimed swamp and reverse its

  18. Scale-Dependent Habitat Selection and Size-Based Dominance in Adult Male American Alligators.

    Directory of Open Access Journals (Sweden)

    Bradley A Strickland

    Full Text Available Habitat selection is an active behavioral process that may vary across spatial and temporal scales. Animals choose an area of primary utilization (i.e., home range then make decisions focused on resource needs within patches. Dominance may affect the spatial distribution of conspecifics and concomitant habitat selection. Size-dependent social dominance hierarchies have been documented in captive alligators, but evidence is lacking from wild populations. We studied habitat selection for adult male American alligators (Alligator mississippiensis; n = 17 on the Pearl River in central Mississippi, USA, to test whether habitat selection was scale-dependent and individual resource selectivity was a function of conspecific body size. We used K-select analysis to quantify selection at the home range scale and patches within the home range to determine selection congruency and important habitat variables. In addition, we used linear models to determine if body size was related to selection patterns and strengths. Our results indicated habitat selection of adult male alligators was a scale-dependent process. Alligators demonstrated greater overall selection for habitat variables at the patch level and less at the home range level, suggesting resources may not be limited when selecting a home range for animals in our study area. Further, diurnal habitat selection patterns may depend on thermoregulatory needs. There was no relationship between resource selection or home range size and body size, suggesting size-dependent dominance hierarchies may not have influenced alligator resource selection or space use in our sample. Though apparent habitat suitability and low alligator density did not manifest in an observed dominance hierarchy, we hypothesize that a change in either could increase intraspecific interactions, facilitating a dominance hierarchy. Due to the broad and diverse ecological roles of alligators, understanding the factors that influence their

  19. Scale-dependent habitat selection and size-based dominance in adult male American alligators

    Science.gov (United States)

    Strickland, Bradley A.; Vilella, Francisco; Belant, Jerrold L.

    2016-01-01

    Habitat selection is an active behavioral process that may vary across spatial and temporal scales. Animals choose an area of primary utilization (i.e., home range) then make decisions focused on resource needs within patches. Dominance may affect the spatial distribution of conspecifics and concomitant habitat selection. Size-dependent social dominance hierarchies have been documented in captive alligators, but evidence is lacking from wild populations. We studied habitat selection for adult male American alligators (Alligator mississippiensis; n = 17) on the Pearl River in central Mississippi, USA, to test whether habitat selection was scale-dependent and individual resource selectivity was a function of conspecific body size. We used K-select analysis to quantify selection at the home range scale and patches within the home range to determine selection congruency and important habitat variables. In addition, we used linear models to determine if body size was related to selection patterns and strengths. Our results indicated habitat selection of adult male alligators was a scale-dependent process. Alligators demonstrated greater overall selection for habitat variables at the patch level and less at the home range level, suggesting resources may not be limited when selecting a home range for animals in our study area. Further, diurnal habitat selection patterns may depend on thermoregulatory needs. There was no relationship between resource selection or home range size and body size, suggesting size-dependent dominance hierarchies may not have influenced alligator resource selection or space use in our sample. Though apparent habitat suitability and low alligator density did not manifest in an observed dominance hierarchy, we hypothesize that a change in either could increase intraspecific interactions, facilitating a dominance hierarchy. Due to the broad and diverse ecological roles of alligators, understanding the factors that influence their social dominance

  20. Integration of Long-Term Research into a GIS Based Landscape Habitat Model for the Red-Cockaded Woodpecker

    Energy Technology Data Exchange (ETDEWEB)

    Franzreb, K.; Lloyd, F.T.

    2000-10-01

    The red cockaded woodpecker has been intensively studied since 1985 when the population was on the verge of extinction. The population decline is primarily the result of timber harvesting prior to 1950 and restricted burning. Construction of artificial cavities, translocations, competitor control, and removal of hardwood mid-story has provided suitable habitat. Since 1985, the population has increased from 4 to 99 birds. A GIS model is being developed to simulate the development of habitat at SRS in relation to management and existing vegetation.