WorldWideScience

Sample records for grouper potato bass

  1. 78 FR 72868 - Fisheries of the Caribbean, Gulf of Mexico, and South Atlantic; Snapper-Grouper Fishery Off the...

    Science.gov (United States)

    2013-12-04

    ... bass commercial and recreational ACLs were increased through Regulatory Amendment 19 to the FMP (78 FR..., and South Atlantic; Snapper-Grouper Fishery Off the South Atlantic States; Regulatory Amendment 16... Snapper-Grouper Fishery of the South Atlantic Region (Regulatory Amendment 16). Regulatory Amendment...

  2. 76 FR 61285 - Fisheries of the Caribbean, Gulf of Mexico, and South Atlantic; South Atlantic Snapper-Grouper...

    Science.gov (United States)

    2011-10-04

    ... reduce overfishing of the South Atlantic black sea bass resource. DATES: This rule is effective October 4... overfishing and prevent overfishing from occurring. AMs are management controls to prevent ACLs from being... ACLs for eight snapper-grouper species in the FMP that are undergoing overfishing, including black...

  3. Functional analysis of an orange-spotted grouper (Epinephelus coioides) interferon gene and characterisation of its expression in response to nodavirus infection.

    Science.gov (United States)

    Chen, Young-Mao; Kuo, Cham-En; Chen, Guan-Ru; Kao, Yu-Ting; Zou, Jun; Secombes, Chris J; Chen, Tzong-Yueh

    2014-10-01

    We cloned and sequenced 2C I-IFN, a two-cysteine containing type I interferon (I-IFN) gene, in orange-spotted grouper (Epinephelus coioides). The cDNA has 769 base pairs, the protein has 172 amino acids, and the predicted signal peptide has 18 amino acids with two cysteines. This gene is similar to I-FNs from sea bass and other teleosts. 2C I-IFN has 5 exons and 4 introns, also similar to other teleost I-IFNs. Immunohistochemical (IHC) analysis indicated that expression is predominantly membrane-localized in healthy grouper, but has a zonal distribution in nodavirus-infected grouper. Grouper infected with nodavirus had elevated levels of 2C I-IFN at 72 h and Mx at days 6-7. Recombinant 2C I-IFN activated grouper Mx, leading to upregulated antiviral activity. The grouper Mx promoter was highly induced after treatment with recombinant 2C I-IFN. The present results suggest that expression of grouper 2C I-IFN may participate in the immunologic barrier function against nodavirus.

  4. Vaccination of grouper broodfish (Epinephelus tukula) reduces the risk of vertical transmission by nervous necrosis virus.

    Science.gov (United States)

    Kai, Yu-Hsuan; Su, Huei-Meei; Tai, Kun-Tsai; Chi, Shau-Chi

    2010-01-22

    Nervous necrosis virus (NNV) has caused mass mortality in many species of cultured fish at larval stage. Strong evidence of vertical transmission of NNV has been reported in the carrier broodstock of striped jack and sea bass. An effective immunization program was developed and monitored in adult groupers (Epinephelus coioides) with average body weight of 1.35kg. The highest neutralizing antibody titers were found in the fish intramuscularly injected with adjuvanted NNV vaccine at 10(9)TCID(50)kg(-1), and the enhanced 2-fold neutralization activity could sustain up to 17 months post-vaccination (mpv). An immunization program was applied in the broodstocks of grouper (Epinephelus tukula) with body weight of 35-60kg. The levels of NNV-specific antibodies detected, from 1 to 5 mpi, in the homogenates of the eggs from the vaccinated broodfish were elevated than that from non-vaccinated fish. By nested RT-PCR, NNV was detectable in the eggs from the non-vaccinated fish at Month 5, but not in the eggs from vaccinated fish. It is therefore suggested that vaccination will be a potentially practical measure to reduce the risk of vertical transmission of NNV of grouper broodfish under stress of repeated spawning.

  5. Hierarchical Bass model

    Science.gov (United States)

    Tashiro, Tohru

    2014-03-01

    We propose a new model about diffusion of a product which includes a memory of how many adopters or advertisements a non-adopter met, where (non-)adopters mean people (not) possessing the product. This effect is lacking in the Bass model. As an application, we utilize the model to fit the iPod sales data, and so the better agreement is obtained than the Bass model.

  6. Hierarchical Bass model

    CERN Document Server

    Tashiro, Tohru

    2013-01-01

    We propose a new model about diffusion of a product which includes a memory of how many adopters or advertisements a non-adopter met, where (non-)adopters mean people (not) possessing the product. This effect is lacking in the Bass model. As an application, we utilize the model to fit the iPod sales data, and so the better agreement is obtained than the Bass model.

  7. The Flexible Bass Absorber

    DEFF Research Database (Denmark)

    Adelman-Larsen, Niels Werner; Thompson, Eric Robert; Gade, Anders Christian

    2007-01-01

    Multi-purpose concert halls face a dilemma. They host different performance types that require significantly different acoustic conditions in order to provide the best sound quality to both the performers, sound engineers and the audience. Pop and rock music often contain high levels of bass soun...

  8. The Flexible Bass Absorber

    DEFF Research Database (Denmark)

    Adelman-Larsen, Niels Werner; Thompson, Eric Robert; Gade, Anders Christian

    2007-01-01

    Multi-purpose concert halls face a dilemma. They host different performance types that require significantly different acoustic conditions in order to provide the best sound quality to both the performers, sound engineers and the audience. Pop and rock music often contains high levels of bass sou...

  9. The Flexible Bass Absorber

    DEFF Research Database (Denmark)

    Adelman-Larsen, Niels Werner; Thompson, Eric Robert; Gade, Anders Christian

    2007-01-01

    Multi-purpose concert halls face a dilemma. They host different performance types that require significantly different acoustic conditions in order to provide the best sound quality to both the performers, sound engineers and the audience. Pop and rock music often contain high levels of bass soun...... has been developed. Measurements were made on a variable and mobile low-frequency absorber. The paper presents the results of prototype sound absorption measurements as well as elements of the design.......Multi-purpose concert halls face a dilemma. They host different performance types that require significantly different acoustic conditions in order to provide the best sound quality to both the performers, sound engineers and the audience. Pop and rock music often contain high levels of bass sound...

  10. The Flexible Bass Absorber

    DEFF Research Database (Denmark)

    Adelman-Larsen, Niels Werner; Thompson, Eric Robert; Gade, Anders Christian

    2007-01-01

    Multi-purpose concert halls face a dilemma. They host different performance types that require significantly different acoustic conditions in order to provide the best sound quality to both the performers, sound engineers and the audience. Pop and rock music often contains high levels of bass sou...... has been developed. Measurements were made on a variable and mobile low-frequency absorber. The paper presents the results of prototype sound absorption measurements as well as elements of the design.......Multi-purpose concert halls face a dilemma. They host different performance types that require significantly different acoustic conditions in order to provide the best sound quality to both the performers, sound engineers and the audience. Pop and rock music often contains high levels of bass sound...

  11. Transcriptome analysis of orange-spotted grouper (Epinephelus coioides) spleen in response to Singapore grouper iridovirus

    National Research Council Canada - National Science Library

    Huang, Youhua; Huang, Xiaohong; Yan, Yang; Cai, Jia; Ouyang, Zhengliang; Cui, Huachun; Wang, Peiran; Qin, Qiwei

    2011-01-01

    .... coioides infected with Singapore grouper iridovirus (SGIV). Using 454 pyrosequencing, we obtained abundant high-quality ESTs from two spleen-complementary DNA libraries which were constructed from SGIV-infected (V...

  12. Some Model Theoretic Remarks on Bass Modules

    Directory of Open Access Journals (Sweden)

    E. Momtahan

    2011-09-01

    Full Text Available We study Bass modules, Bass rings, and related concepts from a model theoretic point of view. We observe that the class of Bass modules (over a fixed ring is not stable under elementary equivalence. We observe that under which conditions the class of Bass rings are stable under elementary equivalence.

  13. Black Sea Bass genetic connectivity

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Microsatellite analysis of black sea bass was undertaken to determine magnitude and direction of mixing of black seabass across the Hatteras boundary, as well as...

  14. 77 FR 42688 - Snapper-Grouper Fishery Off the Southern Atlantic States; Snapper-Grouper Management Measures

    Science.gov (United States)

    2012-07-20

    ... 17B to the FMP (75 FR 82280, December 30, 2010). Since then, golden tilefish have been assessed... National Oceanic and Atmospheric Administration 50 CFR Part 622 RIN 0648-BC03 Snapper-Grouper Fishery Off the Southern Atlantic States; Snapper-Grouper Management Measures AGENCY: National Marine...

  15. Immune responses of orange-spotted grouper, Epinephelus coioides, against virus-like particles of betanodavirus produced in Escherichia coli.

    Science.gov (United States)

    Lai, Yu-Xiong; Jin, Bao-Lei; Xu, Yu; Huang, Li-Jie; Huang, Run-Qing; Zhang, Yong; Kwang, Jimmy; He, Jian-Guo; Xie, Jun-Feng

    2014-01-15

    Betanodaviruses are the causative agents of viral nervous necrosis (VNN), a serious disease of cultured marine fish worldwide. Virus-like particles (VLPs) are one of the good novel vaccine candidates to control this disease. Until now, betanodavirus vaccine studies mainly focused on the humoral immune response and mortality after virus challenge. However, little is known about the activation of genes responsible for cellular and innate immunity by vaccines. In the present study, VLPs of orange-spotted grouper nervous necrosis virus (OGNNV) were produced in prokaryotes and their ability to enter Asian sea bass cells was the same as native virus, suggesting that they possess a similar structure to OGNNV. VLPs immunogenicity was then determined by intramuscularly vaccinating Epinephelus coioides at different concentrations (1.5 or 15 μg g(-1) fish body weight, FBW) and immunizing frequencies (administration once, twice and thrice). A single vaccination with the dosage of 1.5 μg g(-1) FBW is enough to provoke high titer antibodies (average 3 fold higher than that of negative control) with strong neutralizing antibody titer as early as 1 week post immunization. Furthermore, quantitative PCR analysis revealed that eleven genes associated with humoral, cellular and innate immunities were up-regulated in the liver, spleen and head kidney at 12h post immunization, correlating with the early antibody response. In conclusion, we demonstrated that VLP vaccination induced humoral immune responses and activated genes associated with cellular and innate immunity against betanodavirus infection in orange-spotted grouper.

  16. Environmental quality for striped bass

    Energy Technology Data Exchange (ETDEWEB)

    Coutant, C. C.

    1980-01-01

    Effects of environmental changes on the quality of life for striped bass populations can be evaluated objectively with modern procedures of environmental risk analysis. Such analysis requires knowledge of the sources of risk in the context of environmental requirements of the species. A prime environmental requirement of striped bass appears to be a suitable thermal structure that accommodates the hereditary thermal niche, which changes with age. Strong thermal preferences had promoted striped bass survival in the pristine natural estuaries of eastern North America, but they may increase risks to the species in some new environments and in native ones that are altered by man. The magnitude and likelihood of risks for striped bass from many pollutants and physical changes (structures or water flow, for example) depend upon the fish's thermally controlled distribution. The importance of a species' thermal niche and of the thermal structure of aquatic environments for population success is only beginning to be recognized and included in risk assessments.

  17. The historical biogeography of groupers: Clade diversification patterns and processes.

    Science.gov (United States)

    Ma, Ka Yan; Craig, Matthew Thomas; Choat, John Howard; van Herwerden, Lynne

    2016-07-01

    Groupers (family Epinephelidae) are a clade of species-rich, biologically diverse reef fishes. Given their ecological variability and widespread distribution across ocean basins, it is important to scrutinize their evolutionary history that underlies present day distributions. This study investigated the patterns and processes by which grouper biodiversity has been generated and what factors have influenced their present day distributions. We reconstructed a robust, time-calibrated molecular phylogeny of Epinephelidae with comprehensive (∼87%) species sampling, whereby diversification rates were estimated and ancestral ranges were reconstructed. Our results indicate that groupers originated in what is now the East Atlantic during the mid-Eocene and diverged successively to form six strongly supported main clades. These clades differ in age (late Oligocene to mid-Miocene), geographic origin (West Atlantic to West Indo-Pacific) and temporal-spatial diversification pattern, ranging from constant rates of diversification to episodes of rapid radiation. Overall, divergence within certain biogeographic regions was most prevalent in groupers, while vicariant divergences were more common in Tropical Atlantic and East Pacific groupers. Our findings reveal that both biological and geographical factors have driven grouper diversification. They also underscore the importance of scrutinizing group-specific patterns to better understand reef fish evolution.

  18. 75 FR 62762 - Proposed Information Collection; Comment Request; Socio-Economic Assessment of Snapper Grouper...

    Science.gov (United States)

    2010-10-13

    ...-Economic Assessment of Snapper Grouper Fisheries in the U.S. Caribbean AGENCY: National Oceanic and... demographic, cultural, economic, and social information about the snapper-grouper fisheries in the...

  19. Grouper: A Compact, Streamable Triangle Mesh Data Structure

    Energy Technology Data Exchange (ETDEWEB)

    Luffel, Mark [Georgia Inst. of Technology, Atlanta, GA (United States). Visualization and Usability Center (GVU); Gurung, Topraj [Georgia Inst. of Technology, Atlanta, GA (United States). Visualization and Usability Center (GVU); Lindstrom, Peter [Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States); Rossignac, Jarek [Georgia Inst. of Technology, Atlanta, GA (United States). Visualization and Usability Center (GVU)

    2014-01-01

    Here, we present Grouper: an all-in-one compact file format, random-access data structure, and streamable representation for large triangle meshes. Similarly to the recently published SQuad representation, Grouper represents the geometry and connectivity of a mesh by grouping vertices and triangles into fixed-size records, most of which store two adjacent triangles and a shared vertex. Unlike SQuad, however, Grouper interleaves geometry with connectivity and uses a new connectivity representation to ensure that vertices and triangles can be stored in a coherent order that enables memory-efficient sequential stream processing. We also present a linear-time construction algorithm that allows streaming out Grouper meshes using a small memory footprint while preserving the initial ordering of vertices. In this construction, we show how the problem of assigning vertices and triangles to groups reduces to a well-known NP-hard optimization problem, and present a simple yet effective heuristic solution that performs well in practice. Our array-based Grouper representation also doubles as a triangle mesh data structure that allows direct access to vertices and triangles. Storing only about two integer references per triangle-i.e., less than the three vertex references stored with each triangle in a conventional indexed mesh format-Grouper answers both incidence and adjacency queries in amortized constant time. Our compact representation enables data-parallel processing on multicore computers, instant partitioning and fast transmission for distributed processing, as well as efficient out-of-core access. We demonstrate the versatility and performance benefits of Grouper using a suite of example meshes and processing kernels.

  20. Viral Encephalopathy and Retinopathy in groupers (Epinephelus spp. in southern Italy: a threat for wild endangered species?

    Directory of Open Access Journals (Sweden)

    Vendramin Niccolò

    2013-01-01

    Full Text Available Abstract Background Betanodaviruses are the causative agents of Viral Encephalopathy and Retinopathy (VER. To date, more than 50 species have proved to be susceptible and among them, those found in genus Epinephelus are highly represented. Clinical disease outbreaks are generally characterized by typical nervous signs and significant mortalities mainly associated with aquaculture activities, although some concerns for the impact of this infection in wild fish have been raised. In this study, the authors present the first documented report describing an outbreak of VER in wild species in the Mediterranean basin. Case presentation In late summer - early winter 2011 (September-December, significant mortalities affecting wild Dusky grouper (Epinephelus marginatus, Golden grouper (Epinephelus costae and European sea bass (Dicentrarchus labrax were reported in the municipality of Santa Maria di Leuca (Northern Ionian Sea, Italy. The affected fish showed an abnormal swimming behavior and swollen abdomens. During this epizootic, five moribund fish showing clear neurological signs were captured and underwent laboratory investigations. Analytical results confirmed the diagnosis of VER in all the specimens. Genetic characterization classified all betanodavirus isolates as belonging to the RGNNV genotype, revealing a close genetic relationship with viral sequences obtained from diseased farmed fish reared in the same area in previous years. Conclusion The close relationship of the viral sequences between the isolates collected in wild affected fish and those isolated during clinical disease outbreaks in farmed fish in the same area in previous years suggests a persistent circulation of betanodaviruses and transmission between wild and farmed stocks. Further investigations are necessary to assess the risk of viral transmission between wild and farmed fish populations, particularly in marine protected areas where endangered species are present.

  1. Couch Potatoes

    Institute of Scientific and Technical Information of China (English)

    康言

    2007-01-01

    Do you know what a couch potato means?It is not a type of vegetable or a kind of couch.It is a person.In America,the word is often used.You see, in America,a lot of people spend nearly half their free-time watching TV.They do less housework,less charity work and less childcare than watching TV.They stay at home instead of going to a movie or a concert.They think it’s much more comfortable. As there are many channels to choose from,the TV can be interesting,or they can rent a good movie for two dollars and watch it on the VCR.They can sit on a couch and watch TV for hours and hours without stopping.They do nothing all day except watching TV.Even their pets also like watching TV.

  2. Intersex fish : Endocrine disruption in smallmouth bass

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — Intersex and abnormal vitellogenin in smallmouth bass from portions of the Potomac watershed pose a threat to fish resources. This fact sheet summarizes studies that...

  3. ASPECTS OF LEOPARD CORAL GROUPER (Plectropomus leopardus REPRODUCTION IN INDONESIA

    Directory of Open Access Journals (Sweden)

    Retno Andamari

    2007-06-01

    Full Text Available Leopard coral grouper, Plectropomus leopardus is one of the most economically important finfish fish in Indonesia and the demand for the grouper is rapidly increasing in Asia and the Pacific. Grouper exports from Bali were 1,613 mt in 2001, 2,082 mt in 2002 and 2,861 mt in 2003. Understanding the reproductive biology of fishes is an important component in developing mariculture and in the management of capture fisheries. This study reports on the reproductive biology of 86 coral groupers collected from various locations in Indonesia. The length and weight of these fish were recorded and related to gonad development. There was a strong relationship between length and weight; weight being proportional to the length raised to the power (b value 3.2. As the value of b was greater than 3, this suggests that growth is allometric. Histological analysis 73% of the fish were immature, 19% were in transition from females to males, only 4% were male, and only 2 fish (2% had mature gonads: these were female. The sex of 2 fish could not be determined. From these data it can be seen that the leopard coralgrouper has asynchronous gonad development. The two fish that were mature contained 343,980 and 429,259 oocytes and three distinct sizes of oocytes could be found. This suggests that the grouper is a multiple spawner. If fish are required for brood stock, this study has shown that only those with a length greater than 35 cm in standard length should be taken from the wild.

  4. THE EFFECTS OF CRUDE RECOMBINANT VIRAL PROTEIN VACCINES AGAINST GROUPER SLEEPY DISEASE IRIDOVIRUS (GSDIV ON HUMPBACK GROUPER (Cromileptes altivelis

    Directory of Open Access Journals (Sweden)

    Ketut Mahardika

    2015-12-01

    Full Text Available Infection of Megalocytivirus cause serious mass mortality in marine fish in South East Asian countries. The aim of this study was to produce recombinant of GSDIV capsid protein and its protection to humpback grouper Cromileptes altivelis against grouper sleepy disease iridovirus (GSDIV. A major capsid protein (MCP was selected for use as a crude subunit vaccines. This gene target (MCP was inserted to the protein expression system vector of pET SUMO and cloned in cells bacteria Escherichia coli strain BL-21. The MCP was succeded to be induced using 1 mM of IPTG. Results of protein analysis using MALDI TOF-TOF indicated that the MCP has measurement of 49.566 kDa with PI index of 6.00, and contained 453 amino acids. BLAST homology analysis exhibited that the amino acid sequence of the MCP showed high similarity with MCP of Red Sea Bream Iridovirus (RSIV. E. coli expressing MCP protein was inactivated using 0.03% formalin overnight and washed using PBS. The inactivated E. coli as a crude subunit vaccine was then injected intramuscularly to humpback grouper juveniles. Subsequently, the juveniles were challenged tested with GSDIV. The juveniles vaccinated with the MCP recombinant bacteria showed significantly higher survival rates than control those vaccinated with PBS. Thus, the MCP fusion protein is considered as a potential vaccine against GSDIV infections in grouper.

  5. Gap analysis - potatoes occurrences

    NARCIS (Netherlands)

    Castaneda-Alvarez, N.P.; Haan, de S.; Juarez, H.; Khoury, C.K.; Achicanoy, H.A.; Sosa, C.C.; Bernau, V.; Salas, A.; Heider, B.; Simon, R.; Maxted, N.; Spooner, D.M.

    2015-01-01

    Records (with and without coordinates) representing germplasm accessions and sightings of the wild relatives of potato. These records were used as input to assess the ex situ conservation urgency of 73 wild relatives of potato

  6. MKK7 confers different activities to viral infection of Singapore grouper iridovirus (SGIV) and nervous necrosis virus (NNV) in grouper.

    Science.gov (United States)

    Guo, Minglan; Wei, Jingguang; Zhou, Yongcan; Qin, Qiwei

    2016-10-01

    Mitogen-activated protein kinase 7 (MKK7) is one of the major stress-activated protein kinase (SAPK)-activating kinases in response to environmental or physiological stimuli. Here a MKK7 named as Ec-MKK7 was identified from orange-spotted grouper, Epinephelus coioides. The full-length cDNA of Ec-MKK7 was 1853 bp, with an open reading frame (ORF) of 1272 bp encoding a putative protein of 423 amino acids. A characteristic S-K-A-K-T motif was contained in the domain of dual-specificity protein kinase, mitogen-activated protein kinase kinase 7 (PKc_MKK7). Intracellular localization showed that Ec-MKK7 was localized in both the cytoplasm and the nucleus of grouper spleen (GS) and/or grouper brain (EAGB) cells. Moreover, Ec-MKK7 was universally expressed in all examined tissues and showed expression modulation to challenges of lipopolysacchride (LPS), Singapore grouper iridovirus (SGIV) and polyriboinosinic polyribocytidylic acid (poly I:C) in vivo. A gene targeting strategy over-expressing Ec-MKK7 was performed to examine the activities of MKK7 to viral infection in vitro. Our data showed that Ec-MKK7 was involved in the evasion and replication of SGIV but played an antiviral role to the infection of nervous necrosis virus (NNV). All results demonstrated that Ec-MKK7 could play important roles in grouper innate immunity and show distinct functions on virus infection.

  7. Potato production in Thailand

    Science.gov (United States)

    Potato production has increased dramatically in recent years in Thailand. Consumer demand for fresh and processed potatoes has driven this trend. Most potatoes are produced in northern Thailand in either double cropping highland zones or as a single winter crop following rice in lowland regions. Maj...

  8. 75 FR 10693 - Fisheries of the Caribbean, Gulf of Mexico, and South Atlantic; Snapper-Grouper Resources of the...

    Science.gov (United States)

    2010-03-09

    ..., Gulf of Mexico, and South Atlantic; Snapper-Grouper Resources of the South Atlantic; Trip Limit... . SUPPLEMENTARY INFORMATION: The snapper-grouper fishery of the South Atlantic is managed under the Fishery Management Plan for the Snapper- Grouper Resources of the South Atlantic (FMP). The FMP was prepared by...

  9. 75 FR 51001 - Fisheries of the Caribbean, Gulf of Mexico, and South Atlantic; Snapper and Grouper Off the...

    Science.gov (United States)

    2010-08-18

    ..., and South Atlantic; Snapper and Grouper Off the Southern Atlantic States AGENCY: National Marine... catch and discard mortality within the South Atlantic commercial hook-and-line snapper-grouper fishery... CFR 622 implementing the Fishery Management Plan for the Snapper-Grouper Fishery of the South...

  10. 75 FR 18427 - Fisheries of the Caribbean, Gulf of Mexico, and South Atlantic; Snapper-Grouper Fishery of the...

    Science.gov (United States)

    2010-04-12

    ..., Gulf of Mexico, and South Atlantic; Snapper-Grouper Fishery of the South Atlantic; Closure AGENCY...-5308, e-mail Catherine.Bruger@noaa.gov . SUPPLEMENTARY INFORMATION: The snapper-grouper fishery of the South Atlantic is managed under the Fishery Management Plan for the Snapper- Grouper Fishery of...

  11. 77 FR 65356 - Fisheries of the Caribbean, Gulf of Mexico and South Atlantic; Snapper-Grouper Fishery Off the...

    Science.gov (United States)

    2012-10-26

    ..., Gulf of Mexico and South Atlantic; Snapper-Grouper Fishery Off the Southern Atlantic States; Amendment... Plan (FMP) for the Snapper-Grouper Fishery of the South Atlantic (Amendment 18B) for review, approval... endorsement program for the commercial golden tilefish component of the snapper- grouper fishery;...

  12. 77 FR 8749 - Fisheries of the Caribbean, Gulf of Mexico, and South Atlantic; Snapper-Grouper Fishery of the...

    Science.gov (United States)

    2012-02-15

    ..., Gulf of Mexico, and South Atlantic; Snapper-Grouper Fishery of the South Atlantic; Closure AGENCY...-824- 5305, email: Catherine.Bruger@noaa.gov . SUPPLEMENTARY INFORMATION: The snapper-grouper fishery of the South Atlantic is managed under the Fishery Management Plan for the Snapper- Grouper...

  13. Transcriptome analysis of orange-spotted grouper (Epinephelus coioides spleen in response to Singapore grouper iridovirus

    Directory of Open Access Journals (Sweden)

    Huang Youhua

    2011-11-01

    Full Text Available Abstract Background Orange-spotted grouper (Epinephelus coioides is an economically important marine fish cultured in China and Southeast Asian countries. The emergence of infectious viral diseases, including iridovirus and betanodavirus, have severely affected food products based on this species, causing heavy economic losses. Limited available information on the genomics of E. coioides has hampered the understanding of the molecular mechanisms that underlie host-virus interactions. In this study, we used a 454 pyrosequencing method to investigate differentially-expressed genes in the spleen of the E. coioides infected with Singapore grouper iridovirus (SGIV. Results Using 454 pyrosequencing, we obtained abundant high-quality ESTs from two spleen-complementary DNA libraries which were constructed from SGIV-infected (V and PBS-injected fish (used as a control: C. A total of 407,027 and 421,141 ESTs were produced in control and SGIV infected libraries, respectively. Among the assembled ESTs, 9,616 (C and 10,426 (V ESTs were successfully matched against known genes in the NCBI non-redundant (nr database with a cut-off E-value above 10-5. Gene ontology (GO analysis indicated that "cell part", "cellular process" and "binding" represented the largest category. Among the 25 clusters of orthologous group (COG categories, the cluster for "translation, ribosomal structure and biogenesis" represented the largest group in the control (185 ESTs and infected (172 ESTs libraries. Further KEGG analysis revealed that pathways, including cellular metabolism and intracellular immune signaling, existed in the control and infected libraries. Comparative expression analysis indicated that certain genes associated with mitogen-activated protein kinase (MAPK, chemokine, toll-like receptor and RIG-I signaling pathway were alternated in response to SGIV infection. Moreover, changes in the pattern of gene expression were validated by qRT-PCR, including cytokines

  14. 77 FR 53776 - Snapper-Grouper Fishery of the South Atlantic; Accountability Measures and Commercial Closures...

    Science.gov (United States)

    2012-09-04

    ... Region FMP published March 16, 2010 (77 FR 15916). In part, the final rule for the Comprehensive ACL... National Oceanic and Atmospheric Administration 50 CFR Part 622 RIN 0648-XC132 Snapper-Grouper Fishery of the South Atlantic; Accountability Measures and Commercial Closures for Two Snapper-Grouper...

  15. Advances in the study on nutrient requirements of grouper (Epinephelus sp.): a review

    Science.gov (United States)

    Luo, Zhi; Liu, Yongjian; Mai, Kangsen; Tian, Lixia

    2005-04-01

    The paper reviews the recent advances in studying grouper nutrition requirement for the development of cost-effective and environmentally friendly artificial diets. It consists of seven parts: protein and amino acid, lipid and essential fatty acid, carbohydrate, vitamin, mineral, alternative protein source, broodstock and larval nutrition. The review provides some basic information for further investigation of nutrient requirements of groupers.

  16. Advances in the Study on Nutrient Requirements of Grouper (Epinephelus sp. ): a Review

    Institute of Scientific and Technical Information of China (English)

    LUO Zhi; LIU Yongjian; MAI Kangsen; TIAN Lixia

    2005-01-01

    The paper reviews the recent advances in studying grouper nutrition requirement for the development of cost-effective and environmentally friendly artificial diets. It consists of seven parts: protein and amino acid, lipid and essential fatty acid, carbohydrate, vitamin, mineral, alternative protein source, broodstock and larval nutrition. The review provides some basic information for further investigation of nutrient requirements of groupers.

  17. Ecology and conservation of dusky grouper (Epinephelidae in southern Brazil

    Directory of Open Access Journals (Sweden)

    Mario Vinicius Condini

    2015-11-01

    Full Text Available The dusky grouper Epinephelus marginatus has a broad global distribution and is currently listed as an endangered species at the IUCN Red List. This species has large commercial and ecological importance, but only at the last decade the first studies were carried out on its bioecology at its southernmost distribution limit in Southwestern Atlantic. This region is largely formed by sand bottoms, where the occurrence of reefs and rocks are scarce. Rocky bottoms occur in the neritic region (along 20 to 30 m isobaths and in the jetties in the littoral region, and in both areas the dusky grouper occur frequently. Our studies showed that immature individuals (mean: 4 yrs of dusky groupers inhabiting rocky jetties in the littoral region represents an important economical incoming for artisanal fishermen, whereas adults (mean: 8 yrs are mostly caught at offshore banks 15-25 m deep by coastal fisheries. Microscopic analyses of gonads of littoral and neritic individuals suggest that the littoral region is a growing nursery area and the neritic is a reproductive site. Feeding ecology studies based on stomach content and stable isotopes showed that the species has an important role as top predators in both regions. Future studies on the residence time of immature individuals in the littoral using telemetry are fundamental to further understand the ecology of this endangered species in the Southwestern Atlantic and to help its fishing management and conservation.

  18. DISTRIBUTION ANALYSIS OF ENLARGED CELLS DERIVED FROM GROUPER SLEEPY DISEASE IRIDOVIRUS (GSDIV INFECTED HUMPBACK GROUPER Cromileptes altivelis

    Directory of Open Access Journals (Sweden)

    Indah Mastuti

    2012-06-01

    Full Text Available Characteristic of Megalocytivirus infection has been known to produce formation of inclusion body bearing cells (IBCs on internals organs of fish predominantly on spleen and kidney. Megalocytivirus that infected grouper is known as Grouper Sleepy Disease Iridovirus (GSDIV. This study was conducted to answer the effect of entry sites of GSDIV on distribution of enlarged cells formed on the internal organs of humpback grouper Cromileptes altivelis. Enlarged cells were observed histologically under the light microscope on spleen, head kidney, trunk kidney, liver, gill, heart, stomach, intestine, muscle and brain. Entry sites were designated to intramuscularly injection, intraperitoneally injection, dipped gill and inoculum added feed. Enlarged cells were formed on spleen, head kidney, trunk kidney, liver, gill, heart, stomach, muscle, except on intestine and brain. All the entry sites resulted in formation of enlarged cells on spleen, head kidney, trunk kidney, liver, heart. Spleen and head kidney were the most frequent observed organ. These results suggested that distribution of enlarged cells were not affected by the entry site of GSDIV.

  19. Immunogenicity and protective effects of inactivated Singapore grouper iridovirus (SGIV) vaccines in orange-spotted grouper, Epinephelus coioides.

    Science.gov (United States)

    Ou-yang, Zhengliang; Wang, Peiran; Huang, Xiaohong; Cai, Jia; Huang, Youhua; Wei, Shina; Ji, Huasong; Wei, Jingguang; Zhou, Yongcan; Qin, Qiwei

    2012-10-01

    Vaccination is one of the best methods against viral diseases. In this study, experimental inactivated Singapore grouper iridovirus (SGIV) vaccines were prepared, and immunogenicity and protection against virus infection of the vaccines were investigated in orange-spotted grouper, Epinephelus coioides. Two kinds of vaccines, including β-propiolactone (BPL) inactivated virus at 4°C for 12 h and formalin inactivated virus at 4°C for 12 d, was highly protective against the challenge at 30-day post-vaccination and produced relative percent of survival rates of 91.7% and 100%, respectively. These effective vaccinations induced potent innate immune responses mediated by pro-inflammatory cytokines and type I interferon (IFN)-stimulated genes (ISGs). It is noteworthy that ISGs, such as Mx and ISG15, were up-regulated only in the effective vaccine groups, which suggested that type I IFN system may be the functional basis of early anti-viral immunity. Moreover, effective vaccination also significantly up-regulated of the expression of MHC class I gene and produced substantial amount of specific serum antibody at 4 weeks post-vaccination. Taken together, our results clearly demonstrated that effective vaccination in grouper induced an early, nonspecific antiviral immunity, and later, a specific immune response involving both humoral and cell-mediated immunity.

  20. Antiviral function of grouper MDA5 against iridovirus and nodavirus.

    Science.gov (United States)

    Huang, Youhua; Yu, Yepin; Yang, Ying; Yang, Min; Zhou, Linli; Huang, Xiaohong; Qin, Qiwei

    2016-07-01

    Melanoma differentiation-associated gene 5 (MDA5) is a critical member of retinoic acid-inducible gene I (RIG-I)-like receptor (RLR) family which can recognize viral RNA and enhances antiviral response in host cells. In this study, a MDA5 homolog from orange spotted grouper (Epinephelus coioides) (EcMDA5) was cloned, and its roles on grouper virus infection were characterized. The full-length EcMDA5 cDNA encoded a polypeptide of 982 amino acids with 74% identity with MDA5 homolog from rock bream (Oplegnathus fasciatus). Amino acid alignment analysis indicated that EcMDA5 contained three functional domains: two caspase activation and recruitment domain (CARDs), a DEAD box helicase-like (DExDc) domain, a helicase superfamily C-terminal domain (HELICc), and a C-terminal regulatory domain (RD). Upon challenge with Singapore grouper iridovirus (SGIV) or polyinosin-polycytidylic acid (poly I:C), the transcript of EcMDA5 was significantly up-regulated especially at the early stage post-injection. Under fluorescence microscopy, we observed that EcMDA5 mostly localized in the cytoplasm of grouper spleen (GS) cells. Interestingly, during virus infection, the distribution pattern of EcMDA5 was significantly altered in SGIV infected cells, but not in red spotted grouper nervous necrosis virus (RGNNV) infected cells, suggested that EcMDA5 might interact with viral proteins during SGIV infection. The ectopic expression of EcMDA5 in vitro obviously delayed virus infection induced cytopathic effect (CPE) progression and significantly inhibited viral gene transcription of RGNNV and SGIV. Moreover, overexpression of EcMDA5 not only significantly increased interferon (IFN) and IFN-stimulated response element (ISRE) promoter activities in a dose dependent manner, but also enhanced the expression of IRF3, IRF7 and TRAF6. In addition, the transcription level of the proinflammatory factors, including TNF-α, IL-6 and IL-8 were differently altered by EcMDA5 overexpression during SGIV or

  1. Book review: Black bass diversity: Multidisciplinary science for conservation

    Science.gov (United States)

    Jelks, Howard

    2016-01-01

    These proceedings are from the third symposium dedicated to management and conservation of black basses in the genus Micropterus. The first symposium was held in 1975 (R. H. Stroud and H. Clepper. Black Bass Biology and Management. Washington (DC): Sport Fishing Institute) followed 25 years later by Black Bass 2000 (D. P. Philipp and M. S. Ridgway. 2002. Black Bass: Ecology, Conservation, and Management. Bethesda (MD): American Fisheries Society). Although the previous books discussed conservation of genetic variation and distinct strains of basses, the bulk of the papers in those tomes emphasized management of largemouth and smallmouth bass. In contrast, this third symposium is focused on the rarer bass species and challenges for their successful management.

  2. Potato (Solanum tuberosum L.).

    Science.gov (United States)

    Chetty, Venkateswari J; Narváez-Vásquez, Javier; Orozco-Cárdenas, Martha L

    2015-01-01

    Agrobacterium-mediated transformation is the most common method for the incorporation of foreign genes into the genome of potato as well as many other species in the Solanaceae family. This chapter describes protocols for the genetic transformation of three species of potato: Solanum tuberosum subsp. tuberosum (Desiréé), S. tuberosum subsp. andigenum (Blue potato), and S. tuberosum subsp. andigena using internodal segments as explants.

  3. Potato market in Ukraine

    Directory of Open Access Journals (Sweden)

    С. І. Мельник

    2017-06-01

    Full Text Available Purpose. To study Ukrainian potato market at the current stage of the development and determine its future prospects. Results. The features of Ukrainian potato market were determined. Production is almost fully provided by private households, meeting the needs of the domestic market. Main regions with the highest gross output and production of potatoes were defined. Ukraine is one of the major potato producing countries in the world. Today our country is not a key supplier or importer of this product because of the low export orientation of the industry, its technological backwardness, limited product range and the large number of small producers. Ukraine exports potato mainly to CIS countries, the highest share of potato import comes from the European Union. Now there are only a few large manufacturing companies in the market, which can be classified as industrial. Most potato varieties, officially permitted for dissemination in Ukraine, are classified as table ones and recommended for cultivation in the Forest-Steppe and Polissia zones. Achievements of the industry include the development of such very popular and promising trend as organic potato growing, which area in our country is one of the largest in the world. Conclusions. Potato produced in Ukraine is used for human consumption, animal feeding, planting and processing, its volumes are relatively stable. Large-scale industrial production of potato is not widely practiced because of low wholesale prices and high labor intensity of the cultivation process. During next few years, in view of current trends, production of potato and severe limitations of the domestic market for foreign operations will remain unchanged. A shift in emphasis in the product range – from fresh potato to processed food products should be a prospect for domestic industrial producers to improve their position in Ukraine and abroad.

  4. The Econometrics Of The Bass Diffusion Model

    NARCIS (Netherlands)

    H.P. Boswijk (Peter); Ph.H.B.F. Franses (Philip Hans)

    2002-01-01

    textabstractWe propose a new empirical representation of the Bass diffusion model, in order to estimate the three key parameters, concerning innovation, imitation and maturity. The representation is based on the notion that the observed data may temporarily deviate from the mean path determined by

  5. Mercury in Groupers and Sea Basses from the Gulf of Mexico: Relationships with Size, Age, and Feeding Ecology

    National Research Council Canada - National Science Library

    Tremain, Derek M; Adams, Douglas H

    2012-01-01

    We analyzed total mercury concentration in muscle tissue of 15 serranid species (n = 1,401 fish) collected from the Gulf of Mexico and also developed a comprehensive model relating two commonly used mercury analysis methods...

  6. Potatoes, pathogens and pests

    NARCIS (Netherlands)

    Lazebnik, Jenny

    2017-01-01

    Currently, fungicides are necessary to protect potato crops against late blight, Phytophthora infestans, one of the world’s most damaging crop pathogens. The introgression of plant resistance genes from wild potato species targeted specifically to the late blight pathogen into susceptible

  7. Effects of water velocity on activity of juvenile striped bass

    Energy Technology Data Exchange (ETDEWEB)

    Bowles, R.R.; Griffith, J.S.; Coutant, C.C.

    1976-07-01

    The swimming activity of juvenile striped bass (Morone saxatilis Walbaum) 8 to 80 mm long was investigated in a test chamber simulating, on a small scale, a fixed-screen cooling water intake structure. As water velocity increased from 0 to 30 cm/sec area and distance traveled by juvenile bass 10 to 80 mm long decreased. However, as water velocity increased from 0 to 3 cm/sec the area and distance covered by larval bass increased. The presence of food increased the activity of larval bass, but decreased the activity of juveniles. Area ranged by striped bass at test velocities ranging from 0 to 30 cm/sec increased in proportion to body length. Juvenile striped bass tested at acclimation temperatures between 20 and 5/sup 0/C experienced a 30% reduction of activity. Activity was also reduced as temperature increased from 20 to 30/sup 0/C.

  8. Large outbreaks of ciguatera after consumption of brown marbled grouper.

    Science.gov (United States)

    Chan, Thomas Y K

    2014-07-11

    Brown marbled grouper (Epinephelus fuscoguttatus) is an apex predator from coral reefs of the Indo-Pacific region. All five published case series of ciguatera after consumption of brown marbled grouper were reviewed to characterize the types, severity and chronicity of ciguatera symptoms associated with its consumption. Three of these case series were from large outbreaks affecting over 100-200 subjects who had eaten this reef fish served at banquets. Affected subjects generally developed a combination of gastrointestinal, neurological and, less commonly, cardiovascular symptoms. Gastrointestinal symptoms occurred early and generally subsided in 1-2 days. Some neurological symptoms (e.g., paresthesia of four limbs) could last for weeks or months. Sinus bradycardia and hypotension occurred early, but could be severe and prolonged, necessitating the timely use of intravenous fluids, atropine and dopamine. Other cardiovascular and neurological features included atrial ectopics, ventricular ectopics, dyspnea, chest tightness, PR interval >0.2 s, ST segment changes, polymyositis and coma. Concomitant alcohol consumption was associated with a much higher risk of developing bradycardia, hypotension and altered skin sensation. The public should realize that consumption of the high-risk fish (especially the ciguatoxin-rich parts and together with alcohol use) and repeated ciguatoxin exposures will result in more severe and chronic illness.

  9. Restricted grouper reproductive migrations support community-based management

    KAUST Repository

    Waldie, Peter A.

    2016-03-09

    Conservation commonly requires trade-offs between social and ecological goals. For tropical small-scale fisheries, spatial scales of socially appropriate management are generally small—the median no-take locally managed marine area (LMMA) area throughout the Pacific is less than 1 km2. This is of particular concern for large coral reef fishes, such as many species of grouper, which migrate to aggregations to spawn. Current data suggest that the catchment areas (i.e. total area from which individuals are drawn) of such aggregations are at spatial scales that preclude effective community-based management with no-take LMMAs. We used acoustic telemetry and tag-returns to examine reproductive migrations and catchment areas of the grouper Epinephelus fuscoguttatus at a spawning aggregation in Papua New Guinea. Protection of the resultant catchment area of approximately 16 km2 using a no-take LMMA is socially untenable here and throughout much of the Pacific region. However, we found that spawning migrations were skewed towards shorter distances. Consequently, expanding the current 0.2 km2 no-take LMMA to 1–2 km2 would protect approximately 30–50% of the spawning population throughout the non-spawning season. Contrasting with current knowledge, our results demonstrate that species with moderate reproductive migrations can be managed at scales congruous with spatially restricted management tools.

  10. Restricted grouper reproductive migrations support community-based management.

    Science.gov (United States)

    Waldie, Peter A; Almany, Glenn R; Sinclair-Taylor, Tane H; Hamilton, Richard J; Potuku, Tapas; Priest, Mark A; Rhodes, Kevin L; Robinson, Jan; Cinner, Joshua E; Berumen, Michael L

    2016-03-01

    Conservation commonly requires trade-offs between social and ecological goals. For tropical small-scale fisheries, spatial scales of socially appropriate management are generally small-the median no-take locally managed marine area (LMMA) area throughout the Pacific is less than 1 km(2). This is of particular concern for large coral reef fishes, such as many species of grouper, which migrate to aggregations to spawn. Current data suggest that the catchment areas (i.e. total area from which individuals are drawn) of such aggregations are at spatial scales that preclude effective community-based management with no-take LMMAs. We used acoustic telemetry and tag-returns to examine reproductive migrations and catchment areas of the grouper Epinephelus fuscoguttatus at a spawning aggregation in Papua New Guinea. Protection of the resultant catchment area of approximately 16 km(2) using a no-take LMMA is socially untenable here and throughout much of the Pacific region. However, we found that spawning migrations were skewed towards shorter distances. Consequently, expanding the current 0.2 km(2) no-take LMMA to 1-2 km(2) would protect approximately 30-50% of the spawning population throughout the non-spawning season. Contrasting with current knowledge, our results demonstrate that species with moderate reproductive migrations can be managed at scales congruous with spatially restricted management tools.

  11. Large Outbreaks of Ciguatera after Consumption of Brown Marbled Grouper

    Directory of Open Access Journals (Sweden)

    Thomas Y. K. Chan

    2014-07-01

    Full Text Available Brown marbled grouper (Epinephelus fuscoguttatus is an apex predator from coral reefs of the Indo-Pacific region. All five published case series of ciguatera after consumption of brown marbled grouper were reviewed to characterize the types, severity and chronicity of ciguatera symptoms associated with its consumption. Three of these case series were from large outbreaks affecting over 100–200 subjects who had eaten this reef fish served at banquets. Affected subjects generally developed a combination of gastrointestinal, neurological and, less commonly, cardiovascular symptoms. Gastrointestinal symptoms occurred early and generally subsided in 1–2 days. Some neurological symptoms (e.g., paresthesia of four limbs could last for weeks or months. Sinus bradycardia and hypotension occurred early, but could be severe and prolonged, necessitating the timely use of intravenous fluids, atropine and dopamine. Other cardiovascular and neurological features included atrial ectopics, ventricular ectopics, dyspnea, chest tightness, PR interval >0.2 s, ST segment changes, polymyositis and coma. Concomitant alcohol consumption was associated with a much higher risk of developing bradycardia, hypotension and altered skin sensation. The public should realize that consumption of the high-risk fish (especially the ciguatoxin-rich parts and together with alcohol use and repeated ciguatoxin exposures will result in more severe and chronic illness.

  12. Gonad Histology and Spawning Pattern of the White Grouper (Epinephelus aeneus) from İskenderun Bay (Turkey)

    OpenAIRE

    Gökçe, Mahmut Ali; CENGİZLER, İbrahim; ÖZAK, A. Argun

    2014-01-01

    The gonad histology and spawning pattern of the white grouper (Epinephelus aeneus) were determined from fish sampled from commercial catches. Histological, microscopic and macroscopic techniques were used to examine the ovaries of E. aeneus. A six stage maturity scale based on morphology was proposed to classify ovarian development. The results showed that the white grouper has an asynchronous mode of ovarian development, and the histological study of oocyte development in the white grouper i...

  13. 7 CFR 1207.306 - Potatoes.

    Science.gov (United States)

    2010-01-01

    ... Regulations of the Department of Agriculture (Continued) AGRICULTURAL MARKETING SERVICE (MARKETING AGREEMENTS AND ORDERS; MISCELLANEOUS COMMODITIES), DEPARTMENT OF AGRICULTURE POTATO RESEARCH AND PROMOTION PLAN Potato Research and Promotion Plan Definitions § 1207.306 Potatoes. Potatoes means any or all...

  14. Smallmouth bass and largemouth bass predation on juvenile Chinook salmon and other salmonids in the Lake Washington basin

    Science.gov (United States)

    Tabor, R.A.; Footen, B.A.; Fresh, K.L.; Celedonia, M.T.; Mejia, F.; Low, D.L.; Park, L.

    2007-01-01

    We assessed the impact of predation by smallmouth bass Micropterus dolomieu and largemouth bass M. salmoides on juveniles of federally listed Chinook salmon Oncorhynchus tshawytscha and other anadromous salmonid populations in the Lake Washington system. Bass were collected with boat electrofishing equipment in the south end of Lake Washington (February-June) and the Lake Washington Ship Canal (LWSC; April-July), a narrow waterway that smolts must migrate through to reach the marine environment. Genetic analysis was used to identify ingested salmonids to obtain a more precise species-specific consumption estimate. Overall, we examined the stomachs of 783 smallmouth bass and 310 largemouth bass greater than 100 mm fork length (FL). Rates of predation on salmonids in the south end of Lake Washington were generally low for both black bass species. In the LWSC, juvenile salmonids made up a substantial part of bass diets; consumption of salmonids was lower for largemouth bass than for smallmouth bass. Smallmouth bass predation on juvenile salmonids was greatest in June, when salmonids made up approximately 50% of their diet. In the LWSC, overall black bass consumption of salmonids was approximately 36,000 (bioenergetics model) to 46,000 (meal turnover consumption model) juveniles, of which about one-third was juvenile Chinook salmon, one-third was coho salmon O. kisutch, and one-third was sockeye salmon O. nerka. We estimated that about 2,460,000 juvenile Chinook salmon (hatchery and wild sources combined) were produced in the Lake Washington basin in 1999; thus, the mortality estimates in the LWSC range from 0.5% (bioenergetics) to 0.6% (meal turnover). Black bass prey mostly on subyearlings of each salmonid species. The vulnerability of subyearlings to predation can be attributed to their relatively small size; their tendency to migrate when water temperatures exceed 15??C, coinciding with greater black bass activity; and their use of nearshore areas, where overlap

  15. A standard deviation selection in evolutionary algorithm for grouper fish feed formulation

    Science.gov (United States)

    Cai-Juan, Soong; Ramli, Razamin; Rahman, Rosshairy Abdul

    2016-10-01

    Malaysia is one of the major producer countries for fishery production due to its location in the equatorial environment. Grouper fish is one of the potential markets in contributing to the income of the country due to its desirable taste, high demand and high price. However, the demand of grouper fish is still insufficient from the wild catch. Therefore, there is a need to farm grouper fish to cater to the market demand. In order to farm grouper fish, there is a need to have prior knowledge of the proper nutrients needed because there is no exact data available. Therefore, in this study, primary data and secondary data are collected even though there is a limitation of related papers and 30 samples are investigated by using standard deviation selection in Evolutionary algorithm. Thus, this study would unlock frontiers for an extensive research in respect of grouper fish feed formulation. Results shown that the fitness of standard deviation selection in evolutionary algorithm is applicable. The feasible and low fitness, quick solution can be obtained. These fitness can be further predicted to minimize cost in farming grouper fish.

  16. The importance of bass clarity in pop and rock venues

    DEFF Research Database (Denmark)

    Adelman-Larsen, Niels Werner; Thompson, Eric Robert

    2008-01-01

    High levels of bass sound have been shown to stimulate the part of the brain that controls such basic instincts as sexual desire and hunger [Todd, 2000]. In rock and pop music, the bass frequencies from 40-125 Hz get amplified to very loud levels. Easily half of the electrical power of the PA and...

  17. 76 FR 14804 - Drawbridge Operation Regulations; Bass River, Beverly, MA

    Science.gov (United States)

    2011-03-18

    ... the Hall Whitaker Bridge at mile 0.6 across the Bass River ] at Beverly, Massachusetts. The deviation.... SUPPLEMENTARY INFORMATION: The Hall Whitaker Bridge, across the Bass River at Beverly, Massachusetts, has a... this temporary deviation the Hall Whitaker Bridge may remain in the closed position from 6 p.m....

  18. Achieving sustainable cultivation of potatoes

    Science.gov (United States)

    Every phase of the production cycle impacts the sustainability of potato. Potato physiology determines how genetically encoded developmental attributes interact with local environmental conditions as modified through agricultural practice to produce a perishable crop. In this chapter we highlight ho...

  19. Preparation of Modified Films with Protein from Grouper Fish

    Directory of Open Access Journals (Sweden)

    M. A. Valdivia-López

    2016-01-01

    Full Text Available A protein concentrate (PC was obtained from Grouper fish skin and it was used to prepare films with different amounts of sorbitol and glycerol as plasticizers. The best performing films regarding resistance were then modified with various concentrations of CaCl2, CaSO4 (calcium salts, and glucono-δ-lactone (GDL with the purpose of improving their mechanical and barrier properties. These films were characterized by determining their mechanical properties and permeability to water vapor and oxygen. Formulations with 5% (w/v protein and 75% sorbitol and 4% (w/v protein with a mixture of 15% glycerol and 15% sorbitol produced adequate films. Calcium salts and GDL increased the tensile fracture stress but reduced the fracture strain and decreased water vapor permeability compared with control films. The films prepared represent an attractive alternative for being used as food packaging materials.

  20. Preparation of Modified Films with Protein from Grouper Fish

    Science.gov (United States)

    Tecante, A.; Granados-Navarrete, S.; Martínez-García, C.

    2016-01-01

    A protein concentrate (PC) was obtained from Grouper fish skin and it was used to prepare films with different amounts of sorbitol and glycerol as plasticizers. The best performing films regarding resistance were then modified with various concentrations of CaCl2, CaSO4 (calcium salts), and glucono-δ-lactone (GDL) with the purpose of improving their mechanical and barrier properties. These films were characterized by determining their mechanical properties and permeability to water vapor and oxygen. Formulations with 5% (w/v) protein and 75% sorbitol and 4% (w/v) protein with a mixture of 15% glycerol and 15% sorbitol produced adequate films. Calcium salts and GDL increased the tensile fracture stress but reduced the fracture strain and decreased water vapor permeability compared with control films. The films prepared represent an attractive alternative for being used as food packaging materials. PMID:27597950

  1. Edge detection of red hind grouper vocalizations in the littorals

    Science.gov (United States)

    Matthews, Cameron A.; Beaujean, Pierre-Philippe

    2016-05-01

    Littoral regions typically present to passive sensors as a high noise acoustic environment, particularly with respect to port and harbor regions where tidal variation, often characterized as pink, mixes with reverberation from on-shore business and commercial shipping, often characterized as white. Some fish in these regions, in particular epiphenalius Guttatus or more commonly the red hind grouper, emit relatively narrowband tones in low frequencies to communicate with other fish in such regions. The impact of anthropogenic noise sources on the red Hind and other fish is a topical area of interest for wildlife fisheries, private sportsmen and military offices that is not considered here; the fact that fish species continue to populate and communicate in these regions in the presence of high noise content lends some study to the signal content and modeling of a potential biologically inspired receiver structure.

  2. Acoustic Tonal and Vector Properties of Red Hind Grouper Vocalizations

    Science.gov (United States)

    Matthews, Cameron Anthony

    Vertebrates are the most prodigious vocalizing animals in existence, and the most diverse methods of acoustic communication among vertebrates can be found in the ocean. Relatively many teleost fish are gifted with the ability to communicate acoustically, and the family of serranidae often performs this as a function of the swim bladder. Epinephelus Guttatus (E. guttatus), or more commonly the red hind grouper, is equipped with a drum shaped swim bladder acting as a monopole under typical ocean conditions. This configuration allows for what is understood to be omnidirectional projection of tones approximately centered between 40 and 440 Hz and spanning anywhere from 40 to 200 Hz of bandwidth and modulation effects based on observed data provided by researchers. Prior studies on many other fish show correlation in acoustic communication profile with length, size and sexual identity. In the red hind, sexual dimorphism leads to an inherent female identity in all juvenile fish which converts to male according to environmental factors, recommending at least consistent organs across both sexes be assumed even if not in use. Much research has been performed on male fish vocalization in terms of spectral content. Communication in fish is a complex multi-modal process, with acoustic communication being important for many of the species, particularly those in the littoral regions of the worlds' oceans. If identifying characteristics of the red hind vocalization can be isolated based on detection, classification, tracking and localizing methodologies, then these identifying characteristics may indeed lead to passive feature identification that allows for estimation of individual fish mass. Hypotheses based on vector, cyclostationary and classical tonal mechanics are presented for consideration. A battery of test data collection events, applying pre-recorded fish vocalizations to a geolocated undersea sound source were conducted. The results are supplied with the intent of

  3. Does copepods influence dusky grouper (Epinephelus marginatus early development?

    Directory of Open Access Journals (Sweden)

    Monica Mateus

    2014-06-01

    Full Text Available Good knowledge on the development of early life stages is essential for successful conservation programs of threatened fish species. Diet and rearing system affects early life survival and juvenile quality. Copepods are the natural food of fish larvae in the wild possessing high nutritional value, when compared with live feeds used in aquaculture (rotifers and artemia, and a wide range of size classes. Rearing systems with low water column disturbance and low larval densities enhanced the survival of fragile fish larvae. The aim of this work is to evaluate the effect of the introduction of copepods in the diet of early dusky grouper larvae reared in controlled mesocosm systems using larval development and juvenile quality as indicators. Two feeding protocols were tested, one composed only by rotifers (Brachionus plicatilis, brine shrimp (Artemia spp. and dry feed and the other supplemented with copepods (Paracartia grani from mouth opening (2 day after hatching - DAH to 8 DAH. Feeding behavior, growth, survival, skeletal malformations and digestive enzymes activity was assessed at different developmental stages. The addition of copepods to the early larvae diet of dusky grouper resulted in faster development and higher survival rates. Larvae fed with copepods improved their development. At 20 DAH all larvae reared at the mesocosm with copedods were already at the stage of post-flexion while in the system without copepods this stage was attained later. At 25 DAH only 64% of the larvae were in post flexion in the mesoscosm without copepods. At 30 DAH larvae supplemented with copepods attained an acidic digestion (high specific activity of pepsin earlier than at the system without copepods. In this last system alkaline digestion (trypsin specific activity, characteristic of early larval stages, was significantly higher reinforcing the faster development of larvae fed with copepods. In both systems the incidence of skeletal malformations was low.

  4. Temperature effect on gastric emptying time of hybrid grouper (Epinephelus spp.)

    Energy Technology Data Exchange (ETDEWEB)

    De, Moumita; Ghaffar, Mazlan Abd. [School of Environmental and Natural Resource Sciences, Faculty of Science and Technology, Universiti Kebangsaan Malaysia, 43600 UKM Bangi, Selangor (Malaysia); Das, Simon K. [School of Environmental and Natural Resource Sciences, Faculty of Science and Technology, Universiti Kebangsaan Malaysia, 43600 UKM Bangi, Selangor, Malaysia and Marine Ecosystem Research Centre (EKOMAR), Faculty of Science and Technology, Universiti (Malaysia)

    2014-09-03

    Knowledge of fish gastric emptying time is a necessary component for understanding the fish feeding rates, energy budgets and commercial production of fishes in aquaculture. The hybrid grouper Epinephelus spp. is getting popular as a culture species in Malaysia for their faster growth rate compared to commonly cultured grouper species (giant grouper Epinephelus lanceolatus and tiger grouper Epinephelus fuscoguttatus). There are data suggests that elevated sea water temperature affects gastric emptying time (GET) of fishes. Hence, this study aims to study the GET of hybrid grouper at different temperature (22, 26, 30, 34°C) in laboratory condition with commercial diet pellet. The gastric emptying times (GETs) at different temperatures were determined X-radiographically, using barium sulfate (BaSO{sub 4}) as a contrast medium food marker. The food marker and X-radiography showed that initial voidance of fecal matter began 4-6 h after feeding at all temperature. The fastest GET (13 h) was obsereved in the 30°C group, whereas the longest (17 h) GET was seen in 22°C group fed with artificial diet pellet. Not much differences in GET were recorded between the 26 and 34°C groups as 34°C groups fed lesser amount compared to 26°C groups. Nevertheless a substantial delay in GET was observed in the 22°C group. The findings of this study suggest to culture hybrid grouper between 26 to 30°C with commercial diet pellet as this temperature ranges proliferate the faster digestion process which may contribute faster growth rate of this commerical important fish species. Overall, these findings may have important consequences for optimization of commercial production of hybrid grouper.

  5. Temperature effect on gastric emptying time of hybrid grouper (Epinephelus spp.)

    Science.gov (United States)

    De, Moumita; Ghaffar, Mazlan Abd.; Das, Simon K.

    2014-09-01

    Knowledge of fish gastric emptying time is a necessary component for understanding the fish feeding rates, energy budgets and commercial production of fishes in aquaculture. The hybrid grouper Epinephelus spp. is getting popular as a culture species in Malaysia for their faster growth rate compared to commonly cultured grouper species (giant grouper Epinephelus lanceolatus and tiger grouper Epinephelus fuscoguttatus). There are data suggests that elevated sea water temperature affects gastric emptying time (GET) of fishes. Hence, this study aims to study the GET of hybrid grouper at different temperature (22, 26, 30, 34°C) in laboratory condition with commercial diet pellet. The gastric emptying times (GETs) at different temperatures were determined X-radiographically, using barium sulfate (BaSO4) as a contrast medium food marker. The food marker and X-radiography showed that initial voidance of fecal matter began 4-6 h after feeding at all temperature. The fastest GET (13 h) was obsereved in the 30°C group, whereas the longest (17 h) GET was seen in 22°C group fed with artificial diet pellet. Not much differences in GET were recorded between the 26 and 34°C groups as 34°C groups fed lesser amount compared to 26°C groups. Nevertheless a substantial delay in GET was observed in the 22°C group. The findings of this study suggest to culture hybrid grouper between 26 to 30°C with commercial diet pellet as this temperature ranges proliferate the faster digestion process which may contribute faster growth rate of this commerical important fish species. Overall, these findings may have important consequences for optimization of commercial production of hybrid grouper.

  6. Feed training of peacock bass (Cichla sp.).

    Science.gov (United States)

    Moura, M A; Kubitza, F; Cyrino, J E

    2000-11-01

    The Amazonian cichlid peacock bass (Cichla sp.) is a highly marketable food and sport fish, therefore a suitable species for aquaculture. However, because of its piscivorous feeding preferences, the species does not accept dry feeds voluntarily, turning its intensive culture difficult and costly. This study aimed to wean fingerling peacock bass from inert moist food to dry diets. In a first experiment, 1,134 fingerlings weighting 0.27 g were divided in two 0.37 m3 hapas and fed ground fish flesh with 35% success. Then, 1.3 g fish were pooled, stocked in six 25 L cages and fed two pellet sequences with 80%, 60%, 40%, 20% and 0% ground fish flesh (GFF). One sequence was flavored with 10% krill meal (Euphausia sp.). Training success of fish fed the GFF-00 diet flavored with krill reached 12%a compared to 11.6%a (p GFF with 39.8% success. After the feed training period, 2.2 g fish were then fed a sequence of moist pellets containing 80%, 60% and 45% GFF. Fish trained to feed on moist pellets with 45% ground fish were pooled and stocked into nine 25 L cages. Fish were weaned to dry pellets without ground fish flesh (GFF-00) using three diet sequences: 1) dry pellets; 2) moist pellets; and 3) dry pellets flavored with 4% cod liver oil; all three diets contained 30, 10 and 0% GFF. The three sequences yielded, respectively 30.8%a, 23.6%a, and 24.7%a (p GFF-00. There were no apparent beneficial effects of increasing moisture or addition of cod liver oil as flavor enhancers in the weaning diets. This study revealed the feasibility of training peacock bass to accept dry pellets, but feeding young fish ground fish flesh seemed to be a major bottleneck in improving feed training success.

  7. Potato breeding in the Netherlands

    NARCIS (Netherlands)

    Haan, de H.

    1953-01-01

    A remarkable feature of potato breeding in the Netherlands is the great number of private breeders who have concentrated their efforts on the improvement of the potato. The author calls attention to some circumstances and measures that have made potato breeding attractive in the Netherlands

  8. 75 FR 62488 - Fisheries of the Caribbean, Gulf of Mexico, and South Atlantic; Snapper-Grouper Fishery off the...

    Science.gov (United States)

    2010-10-12

    ... (ACLs), and accountability measures (AMs) for eight snapper- grouper species undergoing overfishing.... This proposed rule is intended to address overfishing of eight snapper-grouper species while..., FMPs for the fisheries determined by the Secretary to be subject to overfishing must establish...

  9. 75 FR 76873 - Fisheries of the Caribbean, Gulf of Mexico, and South Atlantic; Snapper-Grouper Fishery Off the...

    Science.gov (United States)

    2010-12-09

    ... Council is exploring, through Amendment 22 to the Snapper- Grouper FMP, alternative strategies for... the proposed area closure could push effort inshore or offshore and thus negatively impact juvenile... exploring through draft Amendment 22 to the Snapper-Grouper FMP, alternative strategies for managing red...

  10. 76 FR 12882 - Fisheries of the Caribbean, Gulf of Mexico, and South Atlantic; Snapper-Grouper Fishery of the...

    Science.gov (United States)

    2011-03-09

    ..., Gulf of Mexico, and South Atlantic; Snapper-Grouper Fishery of the South Atlantic; Closure AGENCY..., fax: 727-824-5308, e-mail: Catherine.Bruger@noaa.gov . SUPPLEMENTARY INFORMATION: The snapper-grouper fishery of the South Atlantic is managed under the Fishery Management Plan for the Snapper-...

  11. 78 FR 76285 - Fisheries of the Caribbean, Gulf of Mexico, and South Atlantic; Snapper-Grouper Fishery Off the...

    Science.gov (United States)

    2013-12-17

    ... Plan for the Snapper-Grouper Fishery in the South Atlantic Region (74 FR 1621, January 13, 2009) and... Regulatory Amendment 17 was published in the Federal Register on December 4, 2013 (78 FR 72867) and requested..., and South Atlantic; Snapper-Grouper Fishery Off the South Atlantic States; Regulatory Amendment...

  12. 78 FR 10102 - Fisheries of the Caribbean, Gulf of Mexico, and South Atlantic; Snapper-Grouper Resources of the...

    Science.gov (United States)

    2013-02-13

    ... Office of the Federal Register. As implemented by the final rule for Regulatory Amendment 12 (77 FR 61295..., Gulf of Mexico, and South Atlantic; Snapper-Grouper Resources of the South Atlantic; Trip Limit... . SUPPLEMENTARY INFORMATION: The snapper-grouper fishery includes golden tilefish in the South Atlantic and...

  13. 77 FR 11477 - Fisheries of the Caribbean, Gulf of Mexico, and South Atlantic; Snapper-Grouper Fishery off the...

    Science.gov (United States)

    2012-02-27

    ... ACLs were implemented through Amendment 17B to the FMP (75 FR 82280, December 30, 2010), before black..., Gulf of Mexico, and South Atlantic; Snapper-Grouper Fishery off the Southern Atlantic States; Amendment... Snapper- Grouper Fishery of the South Atlantic Region (FMP) for review, approval, and implementation...

  14. 76 FR 23930 - Fisheries of the Caribbean, Gulf of Mexico, and South Atlantic; Snapper-Grouper Fishery of the...

    Science.gov (United States)

    2011-04-29

    ... Snapper and Gag Commercial Trip Limits Amendment 17B to the FMP (75 FR 82280, December 30, 2010), recently... Caribbean, Gulf of Mexico, and South Atlantic; Snapper-Grouper Fishery of the South Atlantic; Snapper...) to the Fishery Management Plan for the Snapper-Grouper Fishery of the South Atlantic Region...

  15. 78 FR 46923 - Fisheries of the Caribbean, Gulf of Mexico, and South Atlantic; Snapper-Grouper Fishery off the...

    Science.gov (United States)

    2013-08-02

    ... (76 FR 101). The NOI listed several options the Council could consider when addressing long-term..., and South Atlantic; Snapper-Grouper Fishery off the South Atlantic States; Amendment 22 AGENCY... broadened scope of Amendment 22 to the Fishery Management Plan for the Snapper-Grouper Fishery in the...

  16. 76 FR 78879 - Fisheries of the Caribbean, Gulf of Mexico, and South Atlantic; Snapper-Grouper Fishery Off the...

    Science.gov (United States)

    2011-12-20

    ... (December 30, 2010, 75 FR 82280). This ACL prohibits all harvest and possession of speckled hind and warsaw..., Gulf of Mexico, and South Atlantic; Snapper-Grouper Fishery Off the Southern Atlantic States; Snapper... Management Plan for the Snapper-Grouper Fishery of the South Atlantic Region (FMP), as prepared by the...

  17. 78 FR 57337 - Fisheries of the Caribbean, Gulf of Mexico, and South Atlantic; Snapper-Grouper Fishery Off the...

    Science.gov (United States)

    2013-09-18

    ..., 2011, NMFS published a notice of agency action (76 FR 78245) designating the South Atlantic Council as..., Gulf of Mexico, and South Atlantic; Snapper-Grouper Fishery Off the Southern Atlantic States; Amendment... Plan for the Snapper-Grouper Fishery of the South Atlantic Region (FMP) for review, approval,...

  18. 76 FR 5325 - Fisheries of the Caribbean, Gulf of Mexico, and South Atlantic; Snapper-Grouper Fishery Off the...

    Science.gov (United States)

    2011-01-31

    ... snapper-grouper fishery of October 14, 2005 (70 FR 60058; October 14, 2005), was almost five years old..., Gulf of Mexico, and South Atlantic; Snapper-Grouper Fishery Off the Southern Atlantic States; Control.... SUMMARY: NMFS announces that it is establishing a new control date to control future access to the...

  19. Glycoalkaloids in potatoes: Content of glycoalkaloids in potatoes for consumption

    DEFF Research Database (Denmark)

    Knuthsen, Pia; Jensen, Udo; Schmidt, Bjørn

    2009-01-01

    Potatoes contain glycoalkaloids in varying levels depending upon variety, treatment and so on. Glycoalkaloids are potentially toxic at the natural levels in potatoes, and Nordic assessments recommend that the safety levels of total glycoalkaloids (TGA) in new potato varieties should not exceed 100...... mg/kg. Thus the aim of this study was to make a survey of the distribution and contents of TGA in potatoes on the Danish market, including many different and relevant varieties during a 6-year period. A total of 386 samples of potato tubers were analysed for α-solanine and α-chaconine by extraction...

  20. QUANTITATIVE HISTOPATHOLOGICAL ANALYSIS OF ENLARGED CELLS DERIVED FROM HUMPBACK GROUPER, Cromileptes altivelis INFECTED WITH GROUPER SLEEPY DISEASE IRIDOVIRUS (GSDIV

    Directory of Open Access Journals (Sweden)

    Indah Mastuti

    2010-12-01

    Full Text Available Pathognomonic sign of grouper sleepy disease iridovirus (GSDIV was proposed to be the formation of enlarged cells and necrotic cells, in which under electron microscope, it is revealed to be the inclusion body bearing cells (IBCs and necrotic cells containing GSDIV viral particles. Spleen and kidney tissues are the major sites for formation of enlarged cells. This paper described the result of histopatological analysis of enlarged cells found in the spleen and kidney of moribund fish after GSDIV challenge. A pathogenicity test was conducted on fish stocked in two tanks for infected groups and the other two tanks for uninfected control groups (15 fish per tank. The infected groups were injected intramuscularly with 0.1 ml of the viral inoculum. The uninfected groups were injected with the same amount of EMEM-2. The GSDIV-infected humpback grouper began to die after 6 days post infection and all died after 7 dpi, excluding one fish which had survived until the end of experimental infection periods (93% to 100% mortality. All of the diseased fish showed massive formation of enlarged cells in their spleen, head kidney and trunk kidney. The largest number of enlarged cells was observed on head kidneys and subsequently followed by spleens, trunk kidney (2.0-200.3/field of view. This result suggested that the number of enlarged cells in the affected organs was not the direct factor that led to the mortality of fish.

  1. Molecular cloning and characterization of a galectin-1 homolog in orange-spotted grouper, Epinephelus coioides.

    Science.gov (United States)

    Chen, Xiuli; Wei, Jingguang; Xu, Meng; Yang, Min; Li, Pingfei; Wei, Shina; Huang, Youhua; Qin, Qiwei

    2016-07-01

    As a member of animal lectin family, galectin has the functions of pathogen recognition, anti-bacteria and anti-virus. In the present study, a galectin-1 homolog (EcGel-1) from grouper (Epinephelus coioides) was cloned and its possible role in fish immunity was analyzed. The full length cDNA of EcGel-1 is 504 bp, including a 408 bp open reading frame (ORF) which encodes 135 amino acids with a molecular mass of 15.19 kDa. Quantitative real-time PCR analysis indicated that EcGel-1 was constitutively expressed in all analyzed tissues of healthy grouper. The expression of EcGel-1 in the spleen of grouper was differentially up-regulated challenged with Singapore grouper iridovirus (SGIV), poly (I:C), and LPS. EcGel-1 was abundantly distributed in the cytoplasm in GS cells. Recombinant EcGel-1(rEcGel-1) protein can make chicken erythrocyte aggregation, and combine with gram negative bacteria and gram positive bacteria in the presence of 2-Mercaptoethanol (β-ME). Taken together, the results showed that EcGel-1 may be an important molecule involved in pathogen recognition and pathogen elimination in the innate immunity of grouper.

  2. Molecular cloning, characterization and functional analysis of QRFP in orange-spotted grouper (Epinephelus coioides).

    Science.gov (United States)

    Shu, Hu; Chen, Huapu; Liu, Yun; Yang, Lidong; Yang, Yuqing; Zhang, Haifa

    2014-10-01

    The peptide QRFP plays an important role in the regulation of vertebrate feeding behavior. In this study, we cloned the full length cDNA of a QRFP precursor in a teleost fish, the orange-spotted grouper (Epinephelus coioides). Sequence analysis has shown that the functional regions of QRFP in other vertebrates (QRFP-25 and QRFP-7) are conserved in orange-spotted grouper. RT-PCR demonstrated that the pre-processed mRNA of QRFP is widely expressed in orange-spotted grouper. Three days of food deprivation did not change the hypothalamic pre-processed QRFP expression. However, QRFP expression significantly increased when the fish were reefed after three days of fasting. Intraperitoneal injection of QRFP-25 peptide to orange-spotted grouper suppressed expression of orexin, but elevated expression of pro-opiomelanocortin (POMC) in the hypothalamus. We also investigated the effects of QRFP-25 on the expression of reproductive genes. The peptide suppressed the expression of seabream-type gonadotropin-releasing hormones (sbGnRH), luteinizing hormone beta subunit (LHβ) and follicle-stimulating hormone beta subunit (FSHβ) in vivo, as well as inhibited the expression of LHβ and FSHβ in pituitary cells in primary culture. Our results indicate that QRFP may play an inhibitory role in the regulation of feeding behavior and reproduction in orange-spotted grouper.

  3. Molecular cloning and functional characterization of spexin in orange-spotted grouper (Epinephelus coioides).

    Science.gov (United States)

    Li, Shuisheng; Liu, Qiongyu; Xiao, Ling; Chen, Huapu; Li, Guangli; Zhang, Yong; Lin, Haoran

    2016-01-01

    Spexin is a newly discovered neuropeptide in vertebrates. Comprehensive comparative studies are required to unveil its biological functions. In order to ascertain the neuroendocrine function of spexin in orange-spotted grouper, its full-length cDNA and genomic DNA sequences were cloned and analyzed. Sequence analyses showed that the spexin gene structure is composed of six exons and five introns, and the amino acids of mature peptide (spexin-14) in grouper are identical to that of other fish. Tissue expression analysis found that grouper spexin is highly expressed in the brain, liver and ovary. Real time-PCR analysis demonstrated that the hypothalamic expression of spexin declined gradually during the ovarian development, and was up-regulated by food deprivation. Intraperitoneal administration of spexin-14 peptides to grouper significantly elevated the mRNA levels of proopiomelanocortin (pomc) and suppressed the orexin expression in the hypothalamus, but could not change the hypothalamic expression of gonadotropin releasing hormone 1 (gnrh1). Both in vivo and in vitro administration of spexin could not significantly influence the expression of follicle-stimulating hormone β (fshβ) and luteinizing hormone β (lhβ) in the pituitary with the exception of an inhibition of gh expression. Our data suggested that the spexin has a significant role in the regulation of energy metabolism and food intake in orange-spotted grouper.

  4. REPRODUCTIVE ASPECTS OF CULTURED HUMPBACK GROUPER (Cromileptes altivelis FOR SUPPORTING SEED PRODUCTION

    Directory of Open Access Journals (Sweden)

    Sari Budi Moria Sembiring

    2014-06-01

    Full Text Available Humpback grouper (Cromileptes altivelis has been successfully spawned in 2000 by IMRAD (Institute of Mariculture Research and Development and there are already the third generation (F3 currently. The reproductive aspects need to be studied to support the success of seed production. Humpback grouper reared in floating cage (F1 and F3 had matured (gonad stage 4 while F2 fish reared in concrete tanks has spawned. Gonadal maturity stage of 38 fishes from first generation (F1 and 35 fishes from the third generation were observed in June 2013 and compared to gonadal maturity stage of 18 fishes from the second generation observed in June 2009. Samples were measured in total length and body weight and gonads were taken for histology preparation to determine gonadal maturity stage and the sex. From the histological observation of the gonads, it showed that all female humpback grouper were in early maturity stage (stage I and II with gonadal maturity index between 0.12% and 5.45%. Further, it was observed that the same gonad was found in different maturity stage and concluded that humpback groupers were multiple spawners (asynchronous. By determining gonadal maturity level, it was also known the minimum size for grouper ready to spawn.

  5. 7 CFR 948.6 - Seed potatoes.

    Science.gov (United States)

    2010-01-01

    ... 7 Agriculture 8 2010-01-01 2010-01-01 false Seed potatoes. 948.6 Section 948.6 Agriculture... and Orders; Fruits, Vegetables, Nuts), DEPARTMENT OF AGRICULTURE IRISH POTATOES GROWN IN COLORADO Order Regulating Handling Definitions § 948.6 Seed potatoes. Seed potatoes or seed means any potatoes...

  6. 7 CFR 948.5 - Potatoes.

    Science.gov (United States)

    2010-01-01

    ... 7 Agriculture 8 2010-01-01 2010-01-01 false Potatoes. 948.5 Section 948.5 Agriculture Regulations... Orders; Fruits, Vegetables, Nuts), DEPARTMENT OF AGRICULTURE IRISH POTATOES GROWN IN COLORADO Order Regulating Handling Definitions § 948.5 Potatoes. Potatoes means and includes all varieties of Irish potatoes...

  7. 7 CFR 953.5 - Potatoes.

    Science.gov (United States)

    2010-01-01

    ... 7 Agriculture 8 2010-01-01 2010-01-01 false Potatoes. 953.5 Section 953.5 Agriculture Regulations... Orders; Fruits, Vegetables, Nuts), DEPARTMENT OF AGRICULTURE IRISH POTATOES GROWN IN SOUTHEASTERN STATES Order Regulating Handling Definitions § 953.5 Potatoes. Potatoes means all varieties of Irish potatoes...

  8. 7 CFR 946.5 - Potatoes.

    Science.gov (United States)

    2010-01-01

    ... 7 Agriculture 8 2010-01-01 2010-01-01 false Potatoes. 946.5 Section 946.5 Agriculture Regulations... Orders; Fruits, Vegetables, Nuts), DEPARTMENT OF AGRICULTURE IRISH POTATOES GROWN IN WASHINGTON Order Regulating Handling Definitions § 946.5 Potatoes. Potatoes means all varieties of Irish potatoes grown within...

  9. 7 CFR 947.5 - Potatoes.

    Science.gov (United States)

    2010-01-01

    ... 7 Agriculture 8 2010-01-01 2010-01-01 false Potatoes. 947.5 Section 947.5 Agriculture Regulations... Orders; Fruits, Vegetables, Nuts), DEPARTMENT OF AGRICULTURE IRISH POTATOES GROWN IN MODOC AND SISKIYOU... Definitions § 947.5 Potatoes. Potatoes means all varieties of Irish potatoes grown within the aforesaid...

  10. Brave New Potato

    Institute of Scientific and Technical Information of China (English)

    杨仲言

    1995-01-01

    By the time Ireland’s terrible potato famine of 1845 had run its course, 1 million people had starved to death. Survivors recalled seeing people dying by the roadside, their mouths stuffed with grass. The cause of the suffering was a virulent fungus known as late blight disease, or Phytophthora infestans,

  11. Re-examining the relationship between invasive lionfish and native grouper in the Caribbean

    Directory of Open Access Journals (Sweden)

    Abel Valdivia

    2014-04-01

    Full Text Available Biotic resistance is the idea that native species negatively affect the invasion success of introduced species, but whether this can occur at large spatial scales is poorly understood. Here we re-evaluated the hypothesis that native large-bodied grouper and other predators are controlling the abundance of exotic lionfish (Pterois volitans/miles on Caribbean coral reefs. We assessed the relationship between the biomass of lionfish and native predators at 71 reefs in three biogeographic regions while taking into consideration several cofactors that may affect fish abundance, including among others, proxies for fishing pressure and habitat structural complexity. Our results indicate that the abundance of lionfish, large-bodied grouper and other predators were not negatively related. Lionfish abundance was instead controlled by several physical site characteristics, and possibly by culling. Taken together, our results suggest that managers cannot rely on current native grouper populations to control the lionfish invasion.

  12. Molecular cloning, expression and functional analysis of ISG15 in orange-spotted grouper, Epinephelus coioides.

    Science.gov (United States)

    Huang, Xiaohong; Huang, Youhua; Cai, Jia; Wei, Shina; Ouyang, Zhengliang; Qin, Qiwei

    2013-05-01

    Interferon-stimulated gene 15 (ISG15) is an ubiquitin homolog that is significantly induced by type I interferons or viral infections. Groupers, Epinephelus spp. being maricultured in China and Southeast Asian countries, always suffer from virus infection, including iridovirus and nodavirus. To date, the roles of grouper genes, especially interferon related genes in virus infection remained largely unknown. Here, the ISG15 homolog (EcISG15) was cloned from grouper Epinephelus coioides and its immune response to Singapore grouper iridovirus (SGIV) and grouper nervous necrosis virus (GNNV) was investigated. The full-length EcISG15 cDNA was composed of 948 bp and encoded a polypeptide of 155 amino acids with 37-68% identity with the known ISG15 homologs from other fish species. Amino acid alignment analysis indicated that EcISG15 contained two ubiquitin-like (UBL) domains and an Ub-conjugation domain (LRGG). Expressional analysis showed that EcISG15 was dramatically induced by GNNV infection, poly I:C or poly dA-dT treatment, but no obvious changes were observed during SGIV infection. Immunofluorescence assay showed that EcISG15 localized mainly in the cytoplasm of grouper cells in response to poly I:C stimulation or GNNV infection, but not in mock or SGIV infected cells. Western blot analysis indicated that the ISGylation was absent in SGIV-infected cells, but significantly enhanced in GNNV-infected or poly I:C transfected cells, suggesting that EcISG15 might play different roles in SGIV and GNNV infection. Furthermore, overexpression of EcISG15 in vitro inhibited the transcription of GNNV genes significantly. Taken together, the results indicated that fish ISG15 might exert important roles against RNA virus infection.

  13. [Teratogenic effect of potato glycoalkaloids].

    Science.gov (United States)

    Wang, X G

    1993-02-01

    Potato glycoalkaloids were extracted from potato sprout and then analyzed to determine their purity by using TLC and HPLC methods and compare with pure alpha-Solanine and alpha-Chaconine of Sigma. The result indicated that the purity of potato glycoalkaloids is 78. 31%, which contains 73.64% alpha-Solanine and 4.67% alpha-Chaconine. The LD50 of mice was 44.721 +/- 5.860 4 mg/kg. In order to determine the toxicity and teratogenicity of potato glycoalkaloids, the effect of potato glycoalkaloids on Kunming pregnant mice were studied. The results showed that: (1) potato glycoalkaloids have teratogenic effects on embryos of mice. It could induce neural tube defects (NTDs), and may be an important teratogen of NTDs. (2) potato glycoalkaloids have embryo toxicity. It could cause the death of embryos and result in absorbed and dead fetuses. (3) potato glycoalkaloids could evidently affect the development of embryos and lead to intrauterine growth retardation (IUGR). An interesting phenomena which just like the clinical manifestation of miscarriage in human being was noticed. If potato glycoalkaloids were given to the pregnant mice on the 5th or 6th day of gestation intraabdominally, vaginal bleeding and abortion would occur, and this has not been reported yet. The animal model of NTDs in this experiments supported our hypothesis that sprouted potato could be a teratogen of NTDs.

  14. Sperm cryopreservation in different grouper subspecies and application in interspecific hybridization.

    Science.gov (United States)

    Liu, Q H; Xiao, Z Z; Wang, X Y; Xu, S H; Guan, S G; Xu, C A; Zhang, H S; Li, J

    2016-05-01

    The present study established and confirmed an efficient technology for groupers: giant grouper Epinephelus lanceolatus, orange-spotted grouper E. coioides, seven-band grouper, E. septemfasciatus, and kelp grouper E. moara sperm cryopreservation and successfully applied the cryopreserved E. lanceolatus sperm into interspecific hybridization with E. coioides. For both E. lanceolatus and E. coioides, the best motility of postthaw sperm were achieved using 6% to 10% DMSO, 6% to 16% propylene glycol, and 6% ethylene glycol as cryoprotectants. Furthermore, we have successfully applied this method into the other two species of E. septemfasciatus (74.56 ± 5.45%) and E. moara (71.67 ± 5.10%) sperm cryopreservation and obtained high motility, respectively. Computer-assisted sperm motion analysis showed that the postthaw sperm of the four species of grouper could keep 30 to 35 minutes motile state in nature seawater. And the freezing-thawing process decreased the sperm motility, speed, and longevity but did not significantly change the sperm movement pattern, and the progressive linear motion still was the dominant movement pattern. For the four species of grouper, the ultrastructural analysis showed 70% to 80% of the spermatozoa had intact morphology with a little of swelling; 20% to 30% were damaged, such as swelling or rupture of head, midpiece, and tail region; and 10% to 20% were severely damaged. Whereas, by the microscopic observation, more than 90% of the postthaw sperm presented normal morphology. In the artificial insemination and hybridization experiment, high fertilization rates and hatching rates were achieved when using 10% DMSO (88.7 ± 5.3%, 85.3 ± 7.4%) and 10% propylene glycol (86.8 ± 3.3%, 83.1 ± 6.6%), with no significant difference in comparison with control (92.2 ± 1.4%, 87.9 ± 4.2%). In addition, we found the embryos from postthaw sperm of E. lanceolatus and E. coioides eggs developed and grew normally as reported in previous

  15. Rumble in the Jungle: City, Place and Uncanny Bass

    Directory of Open Access Journals (Sweden)

    Chris Christodoulou

    2011-06-01

    Full Text Available While bass powerfully resonates among the cultural discourses, lexicology and commercial marketing of a range of electronic dance music (EDM styles, little popular music scholarship has paid attention to the subjective, phenomenological and psycho-physiological significance of bass in its modulation of intense feelings of pleasure. This article examines the linking in jungle/drum 'n' bass culture of bass as a sonic space that produces a powerful sense of jouissance where identity can seem to unravel on the dance-floor and an articulation of contemporary urban space as a place of subjective loss and regression. Overlaying Freud's notion of the uncanny and Kristeva's signifying space of the chora, I discuss how this fetishisation of bass can be linked to the music's cultural formation from deindustrialised regions in London and the South-East of England during the early-1990s; its accelerated break-beats and 'dark' bass-lines can be seen to inscribe recent rapid social, cultural and environmental transformations in the urban metropolis.

  16. Study on the Release of Grouper Epinephelus for Stock Enhancement

    Institute of Scientific and Technical Information of China (English)

    Bo Zhili; Zhou Wanxia

    2003-01-01

    Two methods, tagging and ink injection, are used in the grouper releasing experiment. The studied fishes are the juvenile of Epinephelus akaara and Epinephelus awoara both artificially cultivated and caught from natural waters, and their wild adults. Experimental results show that the inhabiting behaviours for both juvenile and adult fishes show distinct regionality, which move within an area of 2 n mile diameter 651 days and 48 days after being released, respectively. With the tagging method, the tagged fishes could only be recaptured in the year of release while, with the injection method, they could be caught in the lst, 2nd and 3rd years. It is confirmed that in the cement tank, the tagged fishes lose their 1/3 tags. That means that the tagging method is not fit for the release research while the injection method is. Generally, the recaptured rates of injected fishes are 1.4 ~ 4.5 %, 3.1 ~ 13.4 % and 2.7 % for the 1st, 2nd and 3rd years, respectively.

  17. Assessment of endocrine disruption in Smallmouth bass (Micropterus dolomieu) and largemouth bass (Micropterus salmoides) in the Potomac River Watershed

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — Intersex, specifically testicular oocytes, has been observed in male smallmouth bass (SMB) and other centrarchids in the South Branch of the Potomac River and forks...

  18. Structure of potato starch

    DEFF Research Database (Denmark)

    Bertoft, Eric; Blennow, Andreas

    2016-01-01

    are interconnected by long chains with more than 36 residues. The clusters consist of still smaller, very tightly branched building blocks. The clusters direct the semicrystalline structures found inside the starch granules. The crystals, which are ~5.2. nm thick, contain double helices formed from the external...... chains extending from the clusters. A range of enzymes is involved in the biosynthesis of the cluster structures and linear segments. These are required for sugar activation, chain elongation, branching, and trimming of the final branching pattern. As an interesting feature, potato amylopectin...... is substituted with low amounts of phosphate groups monoesterified to the C-3 and the C-6 carbons of the glucose units. They seem to align well in the granular structure and have tremendous effects on starch degradation in the potato and functionality of the refined starch. A specific dikinase catalyzes...

  19. DNA barcoding approaches for fishing authentication of exploited grouper species including the endangered and legally protected goliath grouper Epinephelus itajara

    Directory of Open Access Journals (Sweden)

    Rodrigo A. Torres

    2013-09-01

    Full Text Available Fishing strategies are constantly changing to meet the needs for new or alternative food sources. Consequently, management of fishing activities regarding rates of exploitation is essential, as a number of resources have reached situations of overexploitation. The aim of the present study was to use DNA barcoding from the goliath grouper and other exploited epinephelids in order to provide procedures for DNA authentication to be used as evidence for combating putative illegal fishing. The species studied were Epinephelus adscensionis, Mycteroperca bonaci, Mycteroperca interstitialis, Epinephelus itajara, Mycteroperca venenosa, Epinephelus mystacinus, Dermatolepis inermis, Alphestes afer, Cephalopholis fulva, Mycteroperca acutirostris, Rypticus saponaceus, Mycteroperca marginata and Epinephelus morio. Four of these species are the main epinephelids fished in the Atlantic Ocean. Differential patterns of polymerase chain reaction–restriction fragment length polymorphism were obtained from the species and additional single nucleotide polymorphisms were also detected among the four main epinephelids studied. The procedures proved very efficient and we suggest their applicability to the other fish groups as a way to control illegal capture and retail around the world, especially in cases in which filleting and other forms of de-characterization cause a lack of morpho-anatomical key characters.

  20. The mysterious potato.

    Science.gov (United States)

    Spoerke, D

    1994-08-01

    Even though it comes from a potentially toxic family and may contain solanine-type alkaloids, the potato has risen from a wild food stuff of South American Indians to one of the world's most useful plants and important food source. Toxicity of the tuber commonly seen today is low, with the sprouts and green skin most often involved in toxic exposures. New cultivars may bring about more disease resistance, new tastes, and possibly a smaller solanine content.

  1. 78 FR 36113 - Snapper-Grouper Fishery Off the Southern Atlantic States; Regulatory Amendment 13

    Science.gov (United States)

    2013-06-17

    ... unnecessary negative socio-economic impacts to participants in the snapper-grouper fishery and fishing... environmental assessment, regulatory impact review, Regulatory Flexibility Act analysis, and fishery impact... would not have a significant economic impact on a substantial number of small entities. The...

  2. Cloning, characterization, and expression analysis of a thioredoxin from orange-spotted grouper (Epinephelus coioides).

    Science.gov (United States)

    Wei, Jingguang; Guo, Minglan; Ji, Huasong; Yan, Yang; Ouyang, Zhengliang; Huang, Xiaohong; Hang, Youhua; Qin, Qiwei

    2012-09-01

    Thioredoxins (TRXs) are a family of small, highly conserved proteins that are essential for the maintenance of cellular homeostasis. In this study, a thioredoxin gene was cloned from orange-spotted grouper, Epinephelus coioides (designated as Ec-TRX). The full-length cDNA of Ec-TRX was comprised of 767bp with a 327bp open reading frame that encodes a putative protein of 108 amino acids. Quantitative real-time PCR analysis revealed that the Ec-TRX mRNA was distributed abundantly in grouper, E. coioides skin and liver, and the expression in liver was up-regulated after viral challenge with Singapore grouper iridovirus (SGIV). Recombinant Ec-TRX (rEc-TRX) was expressed in Escherichia coli BL21 (DE3) and purified for mouse anti-Ec-TRX serum preparation. The rEc-TRX fusion protein was demonstrated to possess the expected redox activity in enzymatic analysis, and scavenge free radicals and protect supercoiled DNA from oxidative damage induced by a metal-ion catalyzed oxidation reaction. Subcellular localization revealed that Ec-TRX was distributed in both cytoplasm and nucleus. Overexpression of Ec-TRX in grouper spleen (GS) cells could promote the growth of GS cells and inhibit the replication of SGIV. These results suggest that Ec-TRX could function as an important antioxidant in a physiological context, and perhaps is involved in the responses to viral challenge.

  3. Wnt4 in protogynous hermaphroditic orange-spotted grouper (Epinephelus coioides): identification and expression.

    Science.gov (United States)

    Chen, Huapu; Li, Shuisheng; Xiao, Ling; Zhang, Yong; Li, Guangli; Liu, Xiaochun; Lin, Haoran

    2015-05-01

    Wnt4 (Wingless-type MMTV integration site family member 4) has been demonstrated to play critical roles in ovarian development in mammals, but its function in fish reproduction is still unclear. In the present study, two full-length wnt4 cDNA sequences (named wnt4a and wnt4b) were cloned from the orange-spotted grouper (Epinephelus coioides). Amino acid alignment analysis showed that both orange-spotted grouper Wnt4s proteins had the typical characteristics of the Wnt family. RT-PCR revealed that both wnt4a and wnt4b were highly expressed in the ovaries of the orange-spotted grouper. Temporal expression profiles of both wnt4 genes during embryonic and ovarian development were examined. The expressions of wnt4a and wnt4b genes were first detected at the embryonic morula stage, but the gens showed different expression patterns. During ovarian development, high expression of wnt4a was observed in the ovarian lumen formation and gonium proliferation stage, while wnt4b exhibited strong expression in the early developmental stage of oocytes. Taken together, the present study indicates that the two wnt4 genes are involved in the regulation of ovarian development in the orange-spotted grouper.

  4. Utilization of seagrass habitats by juvenile groupers and snappers in Banten Bay, Banten Province, Indonesia

    NARCIS (Netherlands)

    Nuraini, S.; Carballo, E.C.; Densen, van W.L.T.; Machiels, M.A.M.; Lindeboom, H.J.; Nagelkerke, L.A.J.

    2007-01-01

    Coastal development in Banten Bay, Indonesia, decreased seagrass coverage to only 1.5% of its surface area. We investigated the importance of seagrass as habitat for juvenile groupers (Serranidae) and snappers (Lutjanidae), by performing beam trawl hauls on a weekly basis in two seagrass locations a

  5. Possibility of culturing Pacific goliath grouper Epinephelus quinquefasciatus in water with different salinities

    Directory of Open Access Journals (Sweden)

    Lury García N.

    2015-01-01

    Full Text Available Objective. To assess the survival and growth of juvenile Pacific goliath grouper (Epinephelus quinquefasciatus in captivity at low salinities. Materials and methods. We randomly selected twelve juvenile goliath groupers with an average standard length of 44.2 ± 6.1 cm and 1492 ± 476 g in body weight, and raised them for three months in the laboratory in waters of 32-26, 20, 10 and 5 parts per thousand of salinity. Results. All juvenile Pacific goliath groupers tolerated the initial gradual transfer from full strength seawater to salinities of 32-26, 20, 10, and 5 parts per thousand, which was done over a period of four days. All of them survived and grew in body weight and length during the course of the three-month experiment, in all the treatments of high and low salinity water. The body condition factor (K for each fish was between 1.5 and 2.4. Conclusions. This is a first time trial that documents a randomized, controlled experiment demonstrating the ability of Pacific juvenile goliath grouper to gradually transfer from full strength seawater to water of lower salinity, and survive and grow well in these brackish waters.

  6. Spatial and temporal characteristics of grouper spawning aggregations in marine protected areas in Palau, western Micronesia

    Science.gov (United States)

    Golbuu, Yimnang; Friedlander, Alan M.

    2011-04-01

    In Palau, Ngerumekaol and Ebiil Channels are spawning aggregation sites that have been protected from fishing since 1976 and 2000, respectively. Groupers and other targeted fisheries species were monitored monthly over a 1.5 year period at these two spawning aggregations and two nearby exploited reference sites where grouper formerly aggregated to spawn. At the protected aggregation sites, three grouper species ( Plectropomus areolatus, Epinephelus polyphekadion, and Epinephelus fuscoguttatus) accounted for 78% of the abundance and 85% of the biomass of all resource species surveyed but comprised <1% of the total abundance and biomass at reference sites not protected from fishing that formally harbored spawning aggregations. Abundance and biomass of grouper species pooled were 54% and 72% higher, respectively, at Ngerumekaol compared to Ebiil. Comparisons with data from the same locations in 1995-1996 showed order of magnitude declines in abundance of E. polyphekadion at both locations. The lower numbers of E. fuscoguttatus and the near absence of E. polyphekadion at Ebiil may reflect the effects of previous and current overexploitation.

  7. Age, growth, and natural mortality of yellowfin grouper (Mycteroperca venenosa) from the southeastern United States

    Science.gov (United States)

    Potts, Jennifer C.; Carr, Daniel R.

    2015-01-01

    Ages of yellowfin grouper (n = 306) from the southeastern United States coast from 1979–2014 were determined using sectioned sagittal otoliths. Opaque zones were annular, forming January–June (peaking in February–March). Yellowfin grouper ranged in age from 3 to 31 years; the largest fish measured 1,000 mm fork length (FL). Body size relationships for yellowfin grouper were: W = 1.22 × 10−5 FL3.03 (n = 229, r2 = 0.92); TL = 1.06 FL − 14.53 (n = 60, r2 = 0.99); and FL = 0.93 TL + 18.63 (n = 60, r2 = 0.99), where W = whole weight in grams, FL in mm, and TL = total length in mm. The von Bertalanffy growth equation was: Lt = 958 (1 − e−0.11(t+2.94)) (n = 306). The point estimate of natural mortality for yellowfin grouper was M = 0.14, while age-specific estimates of M ranged from 1.59 to 0.17 for ages 1–31. PMID:26244111

  8. The impact of Nassau grouper size and abundance on scuba diver site selection and MPA economics

    NARCIS (Netherlands)

    Rudd, M.A.; Tupper, M.H.

    2002-01-01

    Since many fisheries are size-selective, the establishment of marine protected areas (MPAs) is expected to increase both the average size and abundance of exploited species, such as the valuable but vulnerable Nassau grouper ( Epinephelus striatus ). Increases in mean size and/or abundance of

  9. The impact of Nassau grouper size and abundance on scuba diver site selection and MPA economics

    NARCIS (Netherlands)

    Rudd, M.A.; Tupper, M.H.

    2002-01-01

    Since many fisheries are size-selective, the establishment of marine protected areas (MPAs) is expected to increase both the average size and abundance of exploited species, such as the valuable but vulnerable Nassau grouper ( Epinephelus striatus ). Increases in mean size and/or abundance of protec

  10. RING domain is essential for the antiviral activity of TRIM25 from orange spotted grouper.

    Science.gov (United States)

    Yang, Ying; Huang, Youhua; Yu, Yepin; Yang, Min; Zhou, Sheng; Qin, Qiwei; Huang, Xiaohong

    2016-08-01

    Tripartite motif-containing 25 (TRIM25) has been demonstrated to exert crucial roles in the regulation of innate immune signaling. However, the roles of fish TRIM25 in antiviral immune response still remained uncertain. Here, a novel fish TRIM25 gene from orange spotted grouper (EcTRIM25) was cloned and its roles in grouper virus infection were elucidated. EcTRIM25 encoded a 734-aa protein which shared 68% identity to large yellow croaker (Larimichthys crocea). Amino acid alignment showed that EcTRIM25 contained three conserved domains, including a RING-finger domain, a B box/coiled-coil domain and a SPRY domain. In healthy grouper, the transcript of EcTRIM25 was predominantly detected in skin, spleen and intestine. After stimulation with Singapore grouper iridovirus (SGIV) or poly I:C, the relative expression of EcTRIM25 in grouper spleen was significantly increased at the early stage of injection. Subcellular localization analysis showed that EcTRIM25 distributed throughout the cytoplasm in grouper cells. Notably, the deletion RING domain affected its accurate localization and displayed microtubule like structures or bright aggregates in GS cells. After incubation with SGIV or red spotted grouper nervous necrosis virus (RGNNV), overexpression of full length of EcTRIM25 in vitro significantly decreased the viral gene transcription of SGIV and RGNNV. Consistently, the deletion of RING domain obviously affected the inhibitory effect of EcTRIM25. Furthermore, overexpression of EcTRIM25 significantly increased the expression level of interferon related signaling molecules, including interferon regulatory factor (IRF) 3, interferon-induced 35-kDa protein (IFP35), MXI, IRF7 and myeloid differentiation factor 88 (MyD88), suggesting that the positive regulation of interferon immune response by EcTRIM25 might affected RGNNV replication directly. Meanwhile, the expression levels of pro-inflammation cytokines were differently regulated by the ectopic expression of EcTRIM25

  11. Hybridization threatens shoal bass populations in the Upper Chattahoochee River Basin: Chapter 37

    Science.gov (United States)

    Dakin, Elizabeth E; Porter, Brady A.; Freeman, Byron J.; Long, James M.; Tringali, Michael D.; Long, James M.; Birdsong, Timothy W.; Allen, Micheal S.

    2015-01-01

    Shoal bass are native only to the Apalachicola-Chattahoochee-Flint river system of Georgia, Alabama, and Florida, and are vulnerable to extinction as a result of population fragmentation and introduction of non-native species. We assessed the genetic integrity of isolated populations of shoal bass in the upper Chattahoochee River basin (above Lake Lanier, Big Creek, and below Morgan Falls Dam) and sought to identify rates of hybridization with non-native, illegally stocked smallmouth bass and spotted bass.

  12. Patterns of color phase indicate spawn timing at a Nassau grouper Epinephelus striatus spawning aggregation

    Institute of Scientific and Technical Information of China (English)

    Stephanie K ARCHER; Scott A HEPPELL; Brice X SEMMENS; Christy V PATTENGILL-SEMMENS; Phillippe G BUSH; Croy M MCCOY; Bradley C JOHNSON

    2012-01-01

    Nassau grouper Epinephelus striatus are a large bodied,top level predator that is ecologically important throughout the Caribbean.Although typically solitary,Nassau grouper form large annual spawning aggregations at predictable times in specific locations.In 2003,The Cayman Islands Marine Conservation Board established protection for a newly rediscovered Nassau grouper spawning aggregation on Little Cayman,British West Indies.The large size of this aggregation provides a unique opportunity to study the behavior of Nassau grouper on a relatively intact spawning aggregation.During non-spawning periods Nassau grouper display a reddish-brown-and-white barred coloration.However,while aggregating they exhibit three additional color phases:“bicolor”,“dark”,and “white belly”.We video sampled the population on multiple days leading up to spawning across five spawning years.Divers focused a laser caliper equipped video camera on individual fish at the aggregation.We later analyzed the video to determine the length of the fish and record the color phase.Our observations show that the relative proportion of fish in the bicolor color phase increases significantly on the day leading up to the primary night of spawning.The increase in the proportion of the bicolor color phase from 0.05 early in the aggregation to 0.40 on the day of spawning suggests that this color phase conveys that a fish is behaviorally and physiologically prepared to spawn.Additionally,82.7% of fish exhibiting dark or white belly coloration early in the aggregation period suggests that these color phases are not only shown by female fish as was previously posited [Current Zoology 58 (1):73-83,2012].

  13. Acrylamide in processed potato products

    Science.gov (United States)

    Trace amounts of acrylamide are found in many foods cooked at high temperatures. Acrylamide in processed potato products is formed from reducing sugars and asparagine and is a product of the Maillard reaction. Processed potato products including fries and chips are relatively high in acrylamide comp...

  14. 21 CFR 102.41 - Potato chips made from dried potatoes.

    Science.gov (United States)

    2010-04-01

    ... 21 Food and Drugs 2 2010-04-01 2010-04-01 false Potato chips made from dried potatoes. 102.41... Specific Nonstandardized Foods § 102.41 Potato chips made from dried potatoes. (a) The common or usual name of the food product that resembles and is of the same composition as potato chips, except that it...

  15. Comparative cost analysis of hybrid striped bass fingerling production in ponds and tanks

    Science.gov (United States)

    Year-round production of hybrid striped bass (female white bass Morone chrysops×male striped bass M. saxatilis) fingerlings would allow food fish growers to sell their product throughout the year, which would improve the consistency of market supply and cash flow for the farm. However, pond producti...

  16. Egg saprolegniasis in a commercial sunshine bass hatchery: Control regime developed using copper sulfate

    Science.gov (United States)

    An obstacle to sunshine bass (female white bass Morone chrysops × male striped bass M. saxatilis) larval production is fungal growth on eggs caused by the water-mold Saprolegnia spp. Copper sulfate (CuSO4) is commonly used for fungus control in troughs of catfish hatcheries, but the effectiveness o...

  17. Hybrid striped bass National Breeding Program: Research towards genetic improvement of a non-model species

    Science.gov (United States)

    The hybrid striped bass (HSB) farming industry at present relies almost totally on wild broodstock for annual production of larvae and fingerlings, and industry efforts to domesticate the parent species of the HSB (white bass: WB, Morone chrysops; striped bass: SB, M. saxatilis) have been fairly lim...

  18. Survey of intersex largemouth bass from impoundments in Georgia USA

    Science.gov (United States)

    Kellock, Kristen A.; Trushel, Brittany E.; Ely, Patrick C.; Jennings, Cecil A.; Bringolf, Robert B.

    2015-01-01

    Intersex fish are increasingly being reported worldwide, primarily in rivers that receive treated wastewater, but few studies have investigated intersex in waters that do not receive wastewater. In a recent reconnaissance survey of intersex fish in North America, a high rate of intersex was reported for Largemouth Bass Micropterus salmoides in some southeastern U.S. rivers; however, the occurrence of intersex in impoundments has not been well described, especially on a statewide scale. Therefore, our objective for this project was to survey the occurrence of intersex Largemouth Bass in a variety of impoundment habitats across Georgia. Largemouth Bass were collected from 11 impoundments without direct municipal or agricultural wastewater inputs. Gonads from all male Largemouth Bass were evaluated for the incidence and severity of the intersex condition based on presence and arrangement of testicular oocytes. Overall 48% of male Largemouth Bass collected from impoundments were intersex, which was found in 9 of the 11 impoundments. Among impoundments, incidence of intersex ranged from 0 to 82% of the males sampled and surface area of the impoundment was a significant predictor of intersex incidence. Intersex fish were smaller than normal males, but population-level effects of intersex and causative factors of endocrine disruption in the impoundments remain unknown. The high incidence of intersex males in small impoundments demonstrates that the condition is not confined to rivers and suggests that factors other than those previously associated with intersex (i.e., municipal wastewater) may be involved.

  19. Differential expression analysis of nuclear oligomerization domain proteins NOD1 and NOD2 in orange-spotted grouper (Epinephelus coioides).

    Science.gov (United States)

    Hou, Qing-Hua; Yi, Shi-Bai; Ding, Xu; Zhang, Hui-Xian; Sun, Yan; Zhang, Yong; Liu, Xiao-Chun; Lu, Dan-Qi; Lin, Hao-Ran

    2012-11-01

    Nucleotide-binding oligomerization domain-containing proteins-1 and -2 (NOD1 and NOD2) are members of the NOD-like receptors (NLRs) family. They are both cytoplasmic receptors, and sense microbial infections/danger molecules to induce host innate immune response. In this study, the full-length ORF sequences of NOD1 and NOD2 were cloned, and the putative amino acid sequences were identified in orange-spotted grouper (Epinephelus coioides). The complete open reading frame (ORF) of grouper NOD1 contained 2823 bp encoding a 940 amino acid protein. Grouper NOD2 cDNA contained a 2967 bp ORF, encoding a protein of 988 amino acid residues. Both grouper NOD1 and NOD2 had similar domains to human and fish counterparts. Phylogenetic tree analysis showed that grouper NOD1 clustered with grass carp, zebrafish and channel catfish, while NOD2 was most closely related to fugu. Expression patterns of grouper NOD1 and NOD2 were next studied. NOD1 had the highest level of expression in skin while NOD2 in trunk kidney. Post Vibrio alginolyticus (strain EcGS020401), lipopolysaccharide (LPS) or PolyI:C challenges, gene expression of grouper NOD1 and NOD2 was stimulated to different extents. NOD1 showed a significant enhancement after LPS stimulation, but NOD2 increased more significantly after PolyI:C invasion, indicating that NOD1 and NOD2 may exert different effects on the eradication of bacteria and virus. The adaptor protein RIP-like-interacting CLARP kinase (RICK) and downstream molecule interleukin-8 (IL-8) were also induced at different levels after stimulation, which indicated that NOD1 and NOD2 signal transduction was involved in grouper innate immune protection against bacterial and viral infections.

  20. 7 CFR 946.12 - Seed potatoes.

    Science.gov (United States)

    2010-01-01

    ... 7 Agriculture 8 2010-01-01 2010-01-01 false Seed potatoes. 946.12 Section 946.12 Agriculture... Order Regulating Handling Definitions § 946.12 Seed potatoes. Seed potatoes means and includes all... supervision of the official seed potato certifying agency of the State of Washington or other...

  1. 7 CFR 947.12 - Seed potatoes.

    Science.gov (United States)

    2010-01-01

    ... 7 Agriculture 8 2010-01-01 2010-01-01 false Seed potatoes. 947.12 Section 947.12 Agriculture... Definitions § 947.12 Seed potatoes. Seed potatoes means and includes all potatoes officially certified and tagged, marked or otherwise appropriately identified under the supervision of the official seed...

  2. Potatoes in Space

    Science.gov (United States)

    2004-01-01

    Astroculture is a suite of technologies used to produce and maintain a closed controlled environment for plant growth. The two most recent missions supported growth of potato, dwarf wheat, and mustard plants and provided scientists with the first opportunity to conduct true plant research in space. Light emitting diodes have particular usefulness for plant growth lighting because they emit a much smaller amount of radiant heat than do conventional lighting sources and because they have potential of directing a higher percentage of the emitted light onto plants surfaces. Furthermore, the high output LED's have emissions in the 600-700 nm waveband, which is of highest efficiency for photosynthesis by plants.

  3. Bass-SIR model for diffusion of new products

    CERN Document Server

    Fibich, Gadi

    2016-01-01

    We consider the diffusion of new products in social networks, where consumers who adopt the product can later "recover" and stop influencing others to adopt the product. We show that the diffusion is not described by the SIR model, but rather by a novel model, the Bass-SIR model, which combines the Bass model for diffusion of new products with the SIR model for epidemics. The phase transition of consumers from non-adopters to adopters is described by a non-standard Kolmogorov-Johnson-Mehl-Avrami model, in which clusters growth is limited by adopters' recovery. Therefore, diffusion in the Bass-SIR model only depends on the local structure of the social network, but not on the average distance between consumers. Consequently, unlike the SIR model, a small-worlds structure has a negligible effect on the diffusion. Surprisingly, diffusion on scale-free networks is nearly identical to that on Cartesian ones.

  4. Acoustic measurement of potato cannon velocity

    CERN Document Server

    Courtney, M; Courtney, Amy; Courtney, Michael

    2006-01-01

    This article describes measurement of potato cannon velocity with a digitized microphone signal. A microphone is attached to the potato cannon muzzle and a potato is fired at an aluminum target about 10 m away. The potato's flight time can be determined from the acoustic waveform by subtracting the time in the barrel and time for sound to return from the target. The potato velocity is simply the flight distance divided by the flight time.

  5. The importance of bass clarity in pop and rock venues

    OpenAIRE

    Adelman-Larsen, Niels Werner; Thompson, Eric Robert

    2008-01-01

    High levels of bass sound have been shown to stimulate the part of the brain that controls such basic instincts as sexual desire and hunger [Todd, 2000]. In rock and pop music, the bass frequencies from 40-125 Hz get amplified to very loud levels. Easily half of the electrical power of the PA and monitor system goes to these 1.5 octaves. A recent survey [Adelman-Larsen et al., 2007] showed that the most important subjective parameter for a rock and pop music hall to score a high rating was 'b...

  6. V-moda bass freq低频耳塞

    Institute of Scientific and Technical Information of China (English)

    2008-01-01

    V-moda bass freq是一款为喜好低频的用户专门打造的耳塞.外观较为简洁。耳塞的主体单元部分采用了球状设计,表面采用了釉光处理,整体给人以珠圆玉润的感觉。由于专门为配合随声听而设计,所以bass freq非常易于驱动。

  7. Negative regulation of the antiviral response by grouper LGP2 against fish viruses.

    Science.gov (United States)

    Yu, Yepin; Huang, Youhua; Yang, Ying; Wang, Shaowen; Yang, Min; Huang, Xiaohong; Qin, Qiwei

    2016-09-01

    Laboratory of genetics and physiology 2 (LGP2), a member of RIG-I like receptor (RLR) family, plays crucial roles in modulating cellular antiviral response during viral infection. However, the detailed roles of LGP2 in different virus infection were controversial up to now. Here, we cloned a LGP2 gene from orange-spotted grouper (EcLGP2) and investigated its roles in response to grouper virus infection. EcLGP2 encoded a 678-aa protein which shared 83% identity to sea perch (Lateolabrax japonicas). Amino acid alignment showed that EcLGP2 contained three conserved domains, including a DEAD/DEAH box helicase domain, a helicase superfamily C-terminal domain and a C-terminal domain of RIG-I. In healthy grouper, the transcript of EcLGP2 could be predominantly detected in kidney, gill, fin, spleen and skin. Subcellular localization analysis showed that EcLGP2 distributed throughout the cytoplasm in grouper cells. Notably, the intracellular distribution of EcLGP2 was altered at the late stage of Singapore grouper iridovirus (SGIV) infection, but remained unchanged during red-spotted grouper nervous necrosis virus (RGNNV) infection. Moreover, overexpression of EcLGP2 in vitro significantly enhanced the viral replication of SGIV and RGNNV, evidenced by the acceleration of CPE occurrence and the up-regulation of the viral gene transcription or protein synthesis. Further studies indicated that overexpression of EcLGP2 decreased the expression level of interferon related molecules or effectors, including IRF3, IRF7, ISG15, IFP35, MXI, MXII, and MDA5, suggesting that the negative feedback of interferon immune response by EcLGP2 might contribute to the enhancement of RGNNV infection. Moreover, the expression levels of pro-inflammation cytokines, including IL-8 and TNFα were significantly decreased, but that of IL-6 was increased by the ectopic expression of EcLGP2. Thus, our results will contribute greatly to understanding the roles of fish LGP2 in innate immune response during

  8. Stimulatory effects of chitinase on growth and immune defense of orange-spotted grouper (Epinephelus coioides).

    Science.gov (United States)

    Zhang, Yanhong; Feng, Shaozhen; Chen, Jun; Qin, Chaobin; Lin, Haoran; Li, Wensheng

    2012-05-01

    Chitinase, belonging to either family 18 or family 19 of the glycosylhydrolases, hydrolyze chitin into oligosaccharides. In the present study, the cDNA fragment encoding orange-spotted grouper (Epinephelus coioides) chitinase1 was subcloned into pPIC3.5K vector and expressed in Pichia pastoris GS115. The results showed that a band with the size of about 53 kDa could be detected by SDS-PAGE and Western blot. The recombinant protein of grouper chitinase1 (rgChi1) was added into the fish diet containing shrimp shell chitin for feeding experiment lasting 8 weeks. The weight of orange-spotted grouper, fed with diets containing rgChi1 at 0, 5, 10 and 20 μg/g was calculated on the 2nd, 4th, 6th and 8th weeks, and difference in growth rates was first observed in the 6th week of the feeding period and it kept until the end of the feeding experiment. At the end of 8 weeks feeding trial, the percent weight gain (PWG), growth rate (GR) and specific growth rate (SGR) of fish fed with 10 and 20 μg rgChi1/g feed were significantly higher compared to the control group. The neuropeptide Y (NPY), growth-hormone-releasing hormone (GHRH), growth-hormone (GH), interleukin-1beta (IL-1β), cyclooxygenase-2 (COX-2), superoxide dismutase (SOD) (Cu/Zn) and SOD (Mn) mRNA expression of fish fed with diet containing 10 μg/g or/and 20 μg/g rgChi1 were obviously higher than the control group. The lysozyme (LZM) and total SOD activity of fish fed with diet containing rgChi1 at 10 and 20 μg/g were significantly higher than that of the control. The aspartate aminotransferase (AST)/glutamic oxalacetic transaminases (GOT) activity in 20 μg/g group decreased compared to the control group. These results indicated that the grouper chitinase1 was successfully produced using the P. pastoris expression system and the recombinant protein had obvious effects on growth and immune defense. The mRNA expression and protein secretion of grouper chitinase1 and chitinase2 were significantly stimulated in

  9. Integration of Bass Enhancement and Active Noise Control System in Automobile Cabin

    Directory of Open Access Journals (Sweden)

    Liang Wang

    2008-01-01

    Full Text Available With the advancement of digital signal processing technologies, consumers are more concerned with the quality of multimedia entertainment in automobiles. In order to meet this demand, an audio enhancement system is needed to improve bass reproduction and cancel engine noise in the cabins. This paper presents an integrated active noise control system that is based on frequency-sampling filters to track and extract the bass information from the audio signal, and a multifrequency active noise equalizer to tune the low-frequency engine harmonics to enhance the bass reproduction. In the noise cancellation mode, a maximum of 3 dB bass enhancement can be achieved with significant noise suppression, while higher bass enhancement can be achieved in the bass enhance mode. The results show that the proposed system is effective for solving both the bass audio reproduction and the noise control problems in automobile cabins.

  10. Pseudorhabdosynochus species (Monogenoidea, Diplectanidae parasitizing groupers (Serranidae, Epinephelinae, Epinephelini in the western Atlantic Ocean and adjacent waters, with descriptions of 13 new species

    Directory of Open Access Journals (Sweden)

    Kritsky Delane C.

    2015-01-01

    Full Text Available Seventeen of twenty-three species of groupers collected from the western Atlantic Ocean and adjacent waters were infected with 19 identified species (13 new of Pseudorhabdosynochus Yamaguti, 1958 (Dactylogyridea, Diplectanidae; specimens of the Spanish flag Gonioplectrus hispanus, coney Cephalopholis fulva, marbled grouper Dermatolepis inermis, mutton hamlet Alphestes afer, and misty grouper Hyporthodus mystacinus were not infected; the yellowmouth grouper Mycteroperca interstitialis and yellowfin grouper Mycteroperca venenosa were infected with unidentified species of Pseudorhabdosynochus; the Atlantic creolefish Paranthias furcifer was infected with an unidentified species of Diplectanidae that could not be accommodated in Pseudorhabdosynochus. The following species of Pseudorhabdosynochus are described or redescribed based entirely or in part on new collections: Pseudorhabdosynochus americanus (Price, 1937 Kritsky & Beverley-Burton, 1986 from Atlantic goliath grouper Epinephelus itajara; Pseudorhabdosynochus yucatanensis Vidal-Martínez, Aguirre-Macedo & Mendoza-Franco, 1997 and Pseudorhabdosynochus justinella n. sp. from red grouper Epinephelus morio; Pseudorhabdosynochus kritskyi Dyer, Williams & Bunkley-Williams, 1995 from gag Mycteroperca microlepis; Pseudorhabdosynochus capurroi Vidal-Martínez & Mendoza-Franco, 1998 from black grouper Mycteroperca bonaci; Pseudorhabdosynochus hyphessometochus n. sp. from Mycteroperca interstitialis; Pseudorhabdosynochus sulamericanus Santos, Buchmann & Gibson, 2000 from snowy grouper Hyporthodus niveatus and Warsaw grouper Hyporthodus nigritus (new host record; Pseudorhabdosynochus firmicoleatus n. sp. from yellowedge grouper Hyporthodus flavolimbatus and snowy grouper H. niveatus; Pseudorhabdosynochus mcmichaeli n. sp., Pseudorhabdosynochus contubernalis n. sp., and Pseudorhabdosynochus vascellum n. sp. from scamp Mycteroperca phenax; Pseudorhabdosynochus meganmarieae n. sp. from graysby Cephalopholis

  11. Estimating natural mortality rates and simulating fishing scenarios for Gulf of Mexico red grouper (Epinephelus morio) using the ecosystem model OSMOSE-WFS

    Science.gov (United States)

    Grüss, Arnaud; Schirripa, Michael J.; Chagaris, David; Velez, Laure; Shin, Yunne-Jai; Verley, Philippe; Oliveros-Ramos, Ricardo; Ainsworth, Cameron H.

    2016-02-01

    The ecosystem model OSMOSE-WFS was employed to evaluate natural mortality rates and fishing scenarios for Gulf of Mexico (GOM) red grouper (Epinephelus morio). OSMOSE-WFS represents major high trophic level (HTL) groups of species of the West Florida Shelf, is forced by the biomass of plankton and benthos groups, and has a monthly time step. The present application of the model uses a recently developed 'stochastic mortality algorithm' to resolve the mortality processes of HTL groups. OSMOSE-WFS predictions suggest that the natural mortality rate of juveniles of GOM red grouper is high and essentially due to predation, while the bulk of the natural mortality of adult red grouper results from causes not represented in OSMOSE-WFS such as, presumably, red tides. These results were communicated to GOM red grouper stock assessments. Moreover, OSMOSE-WFS indicate that altering the fishing mortality of GOM red grouper may have no global impact on the biomass of the major prey of red grouper, due to the high complexity and high redundancy of the modeled system. By contrast, altering the fishing mortality of GOM red grouper may have a large impact on the biomass of its major competitors. Increasing the fishing mortality of red grouper would increase the biomass of major competitors, due to reduced competition for food. Conversely, decreasing the fishing mortality of red grouper would diminish the biomass of major competitors, due to increased predation pressure on the juveniles of the major competitors by red grouper. The fishing scenarios that we evaluated may have slightly different impacts in the real world, due to some discrepancies between the diets of red grouper and its major competitors predicted by OSMOSE-WFS and the observed ones. Modifications in OSMOSE-WFS are suggested to reduce these discrepancies.

  12. Cloning, expression, and ligand-binding characterization of two neuropeptide Y receptor subtypes in orange-spotted grouper, Epinephelus coioides.

    Science.gov (United States)

    Wang, Fei; Chen, Weimin; Lin, Haoran; Li, Wensheng

    2014-12-01

    As one of the most important multifunctional peptides, neuropeptide Y (NPY) performs its physiological functions through different subtype receptors. In this study, full-length cDNAs of two NPY receptors (YRs) in orange-spotted grouper (Epinephelus coioides) were cloned and named npy8br (y8b) and npy2r (y2). Phylogenetic analysis indicated that the Y8b receptor is an ortholog of the teleostean Y8b receptor, which belongs to the Y1 subfamily, and the Y2 receptor is an ortholog of the teleostean Y2 receptor, which belongs to the Y2 subfamily. Both of the YRs have G protein-coupled receptor family profiles. Multiple alignments demonstrate that the extracellular loop regions of YRs have distinctive residues of each species. Expression profile analysis revealed that the grouper Y8b receptor mRNA is primarily expressed in the brain, stomach and intestine, while the grouper Y2 receptor mRNA is primarily expressed in the brain, ovary, liver and heart. Double immunofluorescence analysis determined that the grouper YRs interact with the grouper NPY around the human embryonic kidney 293T cell surface. Furthermore, site-directed mutagenesis in a phage display system revealed that Asp(6.59) might be a common NPY-binding site, while Asp(2.68) of the Y8b receptor and Glu(5.24) of the Y2 receptor could be likely involved in subtype-specific binding. Combining the expression profile and ligand-binding feature, the grouper Y8b receptor could be involved in regulating food intake via the brain-gut axis and the grouper Y2 receptor might play a role in balancing the regulatory activity of the Y8b receptor and participate in metabolism in the liver and ovary.

  13. Stimulatory effects of neuropeptide Y on the growth of orange-spotted grouper (Epinephelus coioides).

    Science.gov (United States)

    Wu, Shuge; Li, Bo; Lin, Haoran; Li, Wensheng

    2012-11-01

    Neuropeptide Y (NPY) is a member of the pancreatic polypeptide family which is a potent orexigenic peptide known to date in mammals and teleost. This study was carried out to investigate the effects of NPY on food intake and growth of orange-spotted grouper (Epinephelus coioides). Synthetic grouper NPY (gNPY) was given orally at the dose of 0.5, 1.0 and 2.0 μg/g feed for 50 days, results showed that NPY treatment (1.0 and 2.0 μg/g feed) significantly increased growth rate, weight gain, feed conversion efficiency (FCE) and pituitary growth hormone (GH) mRNA level than the control group (pgrouper as in other teleost fish, also indicate that recombinant gNPY from P. pastoris has the same bioactivity as synthetic gNPY and has the potential to be used as a feed additive for both research and aquatic application.

  14. Ciguatoxic Potential of Brown-Marbled Grouper in Relation to Fish Size and Geographical Origin

    Science.gov (United States)

    Chan, Thomas Y. K.

    2015-01-01

    To determine the ciguatoxic potential of brown-marbled grouper (Epinephelus fuscoguttatus) in relation to fish size and geographical origin, this review systematically analyzed: 1) reports of large ciguatera outbreaks and outbreaks with description of the fish size; 2) Pacific ciguatoxin (P-CTX) profiles and levels and mouse bioassay results in fish samples from ciguatera incidents; 3) P-CTX profiles and levels and risk of toxicity in relation to fish size and origin; 4) regulatory measures restricting fish trade and fish size preference of the consumers. P-CTX levels in flesh and size dependency of toxicity indicate that the risk of ciguatera after eating E. fuscoguttatus varies with its geographical origin. For a large-sized grouper, it is necessary to establish legal size limits and control measures to protect public health and prevent overfishing. More risk assessment studies are required for E. fuscoguttatus to determine the size threshold above which the risk of ciguatera significantly increases. PMID:26324735

  15. Ciguatoxic Potential of Brown-Marbled Grouper in Relation to Fish Size and Geographical Origin.

    Science.gov (United States)

    Chan, Thomas Y K

    2015-11-01

    To determine the ciguatoxic potential of brown-marbled grouper (Epinephelus fuscoguttatus) in relation to fish size and geographical origin, this review systematically analyzed: 1) reports of large ciguatera outbreaks and outbreaks with description of the fish size; 2) Pacific ciguatoxin (P-CTX) profiles and levels and mouse bioassay results in fish samples from ciguatera incidents; 3) P-CTX profiles and levels and risk of toxicity in relation to fish size and origin; 4) regulatory measures restricting fish trade and fish size preference of the consumers. P-CTX levels in flesh and size dependency of toxicity indicate that the risk of ciguatera after eating E. fuscoguttatus varies with its geographical origin. For a large-sized grouper, it is necessary to establish legal size limits and control measures to protect public health and prevent overfishing. More risk assessment studies are required for E. fuscoguttatus to determine the size threshold above which the risk of ciguatera significantly increases.

  16. Results from BASS, the BANYAN All-Sky Survey

    CERN Document Server

    Gagné, Jonathan; Doyon, René; Faherty, Jacqueline K; Malo, Lison; Artigau, Étienne

    2014-01-01

    We present results from the BANYAN All-Sky Survey (BASS), a systematic all-sky survey for brown dwarf candidates in young moving groups. We describe a cross-match of the 2MASS and AllWISE catalogs that provides a list of 98 970 potential nearby dwarfs with spectral types later than M5 with measurements of proper motion at precisions typically better than 15 mas yr$^{-1}$, as well as the Bayesian Analysis for Nearby Young AssociatioNs II tool (BANYAN II) which we use to build the BASS catalog from this 2MASS-AllWISE cross-match, consisting of more than 300 candidate members of young moving groups. We present the first results of a spectroscopic follow-up of those candidates, which allowed us to identify several new low-mass stars and brown dwarfs displaying signs of low gravity. We use the BASS catalog to show tentative evidence for mass segregation in AB Doradus and Argus, and reveal a new $\\sim$ 13 M$_{Jup}$ co-moving companion to a young low-mass star in BASS. We obtain a moderate-resolution near-infrared s...

  17. Results from BASS, the BANYAN All-Sky Survey

    Science.gov (United States)

    Gagne, Jonathan; Lafreniere, David; Doyon, Rene; Faherty, Jacqueline K.; Malo, Lison; Artigau, Etienne

    2015-01-01

    We present results from the BANYAN All-Sky Survey (BASS), a systematic all-sky survey for brown dwarf candidates in young moving groups. We describe a cross-match of the 2MASS and ALLWISE catalogs that provides a list of 98 970 potential nearby dwarfs with spectral types later than M5 with measurements of proper motion at precisions typically better than 15 masyr, as well as the Bayesian Analysis for Nearby Young AssociatioNs II tool (BANYAN II) which we use to build the BASS catalog from this 2MASS-ALLWISE cross-match, consisting of more than 300 candidate members of young moving groups. We present the first results of a spectroscopic follow-up of those candidates, which allowed us to identify several new low-mass stars and brown dwarfs displaying signs of low gravity. We use the BASS catalog to show tentative evidence for mass segregation in AB Doradus and Argus, and reveal a new ˜ 13 Mjup\\ co-moving companion to a young low-mass star in BASS. We obtain a moderate-resolution near-infrared spectrum for the companion, which reveals typical signs of youth and a spectral type L4γ.

  18. Raynaud´s phenomenon in a slap bass player

    DEFF Research Database (Denmark)

    Jepsen, Jørgen Riis; Simonsen, Jane Angel

    2016-01-01

    OBJECTIVE: Secondary Raynaud’s phenomenon is a frequent condition related to occupational exposure to local vibration but has not been described in musicians. This study aims to describe cold-induced blanching of the right second and (in particular) third digits in a 67-year-old double bass player...

  19. 2136-IJBCS-Article-Cesar Bassène

    African Journals Online (AJOL)

    hp

    La flore des systèmes agropastoraux de la Basse Casamance (Sénégal) : cas de la communauté ... Climatiques, économiques et socioculturels. La sauvegarde de la ...... vivant peu de temps sont plus vulnérables ... changements planétaires.

  20. Topological Hochschild homology and the Bass trace conjecture

    DEFF Research Database (Denmark)

    Berrick, A. J.; Hesselholt, Lars

    2015-01-01

    We use the methods of topological Hochschild homology to shed new light on groups satisfying the Bass trace conjecture. Factorization of the Hattori–Stallings rank map through the Bökstedt–Hsiang–Madsen cyclotomic trace map leads to Linnell's restriction on such groups. As a new consequence...

  1. Distinct functions of neuromedin u and neuromedin s in orange-spotted grouper.

    Science.gov (United States)

    Li, Shuisheng; Xiao, Ling; Liu, Qiongyu; Zheng, Binbin; Chen, Huapu; Liu, Xiaochun; Zhang, Yong; Lin, Haoran

    2015-10-01

    Neuromedin U (NMU) and neuromedin S (NMS) play inhibitory roles in the regulation of food intake and energy homeostasis in mammals. However, their functions are not clearly established in teleost fish. In the present study, nmu and nms homologs were identified in several fish species. Subsequently, their cDNA sequences were cloned from the orange-spotted grouper (Epinephelus coioides). Sequence analysis showed that the orange-spotted grouper Nmu proprotein contains a 21-amino acid mature Nmu peptide (Nmu-21). The Nms proprotein lost the typical mature Nms peptide, but it retains a putative 34-amino acid peptide (Nmsrp). In situ hybridization revealed that nmu- and nms-expressing cells are mainly localized in the hypothalamic regions associated with appetite regulation. Food deprivation decreased the hypothalamic nmu mRNA levels but induced an increase of nms mRNA levels. Periprandial expression analysis showed that hypothalamic expression of nmu increased significantly at 3 h post-feeding, while nms expression was elevated at the normal feeding time. I.p. injection of synthetic Nmu-21 peptide suppressed the hypothalamic neuropeptide y (npy) expression, while Nmsrp administration significantly increased the expression of npy and orexin in orange-spotted grouper. Furthermore, the mRNA levels of LH beta subunit (lhβ) and gh in the pituitary were significantly down-regulated after Nmu-21 peptide administration, while Nmsrp was able to significantly stimulate the expression of FSH beta subunit (fshβ), prolactin (prl), and somatolaction (sl). Our results indicate that nmu and nms possess distinct neuroendocrine functions and pituitary functions in the orange spotted grouper.

  2. Ciguatoxic Potential of Brown-Marbled Grouper in Relation to Fish Size and Geographical Origin

    OpenAIRE

    Thomas Y. K. Chan

    2015-01-01

    To determine the ciguatoxic potential of brown-marbled grouper (Epinephelus fuscoguttatus) in relation to fish size and geographical origin, this review systematically analyzed: 1) reports of large ciguatera outbreaks and outbreaks with description of the fish size; 2) Pacific ciguatoxin (P-CTX) profiles and levels and mouse bioassay results in fish samples from ciguatera incidents; 3) P-CTX profiles and levels and risk of toxicity in relation to fish size and origin; 4) regulatory measures r...

  3. Interspecific communicative and coordinated hunting between groupers and giant moray eels in the Red Sea.

    Directory of Open Access Journals (Sweden)

    Redouan Bshary

    2006-12-01

    Full Text Available Intraspecific group hunting has received considerable attention because of the close links between cooperative behaviour and its cognitive demands. Accordingly, comparisons between species have focused on behaviours that can potentially distinguish between the different levels of cognitive complexity involved, such as "intentional" communication between partners in order to initiate a joint hunt, the adoption of different roles during a joint hunt (whether consistently or alternately, and the level of food sharing following a successful hunt. Here we report field observations from the Red Sea on the highly coordinated and communicative interspecific hunting between the grouper, Plectropomus pessuliferus, and the giant moray eel, Gymnothorax javanicus. We provide evidence of the following: (1 associations are nonrandom, (2 groupers signal to moray eels in order to initiate joint searching and recruit moray eels to prey hiding places, (3 signalling is dependent on grouper hunger level, and (4 both partners benefit from the association. The benefits of joint hunting appear to be due to complementary hunting skills, reflecting the evolved strategies of each species, rather than individual role specialisation during joint hunts. In addition, the partner species that catches a prey item swallows it whole immediately, making aggressive monopolisation of a carcass impossible. We propose that the potential for monopolisation of carcasses by one partner species represents the main constraint on the evolution of interspecific cooperative hunting for most potentially suitable predator combinations.

  4. C-BASS: The C-Band All Sky Survey

    Science.gov (United States)

    Pearson, Timothy J.; C-BASS Collaboration

    2016-06-01

    The C-Band All Sky Survey (C-BASS) is a project to image the whole sky at a wavelength of 6 cm (frequency 5 GHz), measuring both the brightness and the polarization of the sky. Correlation polarimeters are mounted on two separate telescopes, one at the Owens Valley Observatory (OVRO) in California and another in South Africa, allowing C-BASS to map the whole sky. The OVRO instrument has completed observations for the northern part of the survey. We are working on final calibration of intensity and polarization. The southern instrument has recently started observations for the southern part of the survey from its site at Klerefontein near Carnarvon in South Africa. The principal aim of C-BASS is to allow the subtraction of polarized Galactic synchrotron emission from the data produced by CMB polarization experiments, such as WMAP, Planck, and dedicated B-mode polarization experiments. In addition it will contribute to studies of: (1) the local (region close to the Galactic plane. Observations at many wavelengths from radio to infrared are needed to fully understand the foregrounds. At 5 GHz, C-BASS maps synchrotron polarization with minimal corruption by Faraday rotation, and complements the full-sky maps from WMAP and Planck. I will present the project status, show results of component separation in selected sky regions, and describe the northern survey data products.C-BASS (http://www.astro.caltech.edu/cbass/) is a collaborative project between the Universities of Oxford and Manchester in the UK, the California Institute of Technology (supported by the National Science Foundation and NASA) in the USA, the Hartebeesthoek Radio Astronomy Observatory (supported by the Square Kilometre Array project) in South Africa, and the King Abdulaziz City for Science and Technology (KACST) in Saudi Arabia.

  5. The Bass Parasites of Oneida Lake, 80 Years Later.

    Science.gov (United States)

    Bauer, Eric F; Whipps, Christopher M

    2015-10-01

    A survey of largemouth (Micropterus salmoides) and smallmouth bass (Micropterus dolomieu) parasite communities in Oneida Lake, New York, was conducted in the summer of 2012 and compared to an earlier survey conducted by Van Cleave and Mueller during the summers of 1929 to 1931. The component helminth communities between surveys were 31% similar in composition for largemouth and 28% similar for smallmouth bass. Between species, the component helminth communities were considerably more similar in the present survey (71%) than in the survey conducted by Van Cleave and Mueller (47%). Seven species reported by Van Cleave and Mueller were present in this survey and 21 species are new records for the bass of Oneida Lake. Van Cleave and Mueller did not report prevalence values for several taxa (Monogenea, Copepoda, Myxozoa, and a Trichodina sp.) that were important for separation of parasite infracommunities in species space for both bass species. These parasites represented 28% of all species found in the current survey and may be ecologically important. Several species of parasites exhibited differences in prevalence between surveys. Two species (Rhipidocotyle papillosa and Crepidostomum cornutum) were absent from this survey but were reported as common in the 1929-1931 survey and almost certainly represent extirpations that coincide with the loss of their native bivalve hosts from Oneida Lake. Other differences in the parasite communities may also be explained by the ecological disturbances in Oneida Lake over the past 81 yr. The changes in bass parasite communities between surveys emphasize the importance of recognizing the historical nature of parasite communities, especially in ecosystems with a history of large-scale changes. Most importantly our findings suggest that, similar to trends observed in free-living freshwater biotic communities, anthropogenic ecosystem disturbances may homogenize fish parasite communities.

  6. Spatial distribution and conservation of speckled hind and warsaw grouper in the Atlantic Ocean off the southeastern U.S.

    Directory of Open Access Journals (Sweden)

    Nicholas A Farmer

    Full Text Available There is broad interest in the development of efficient marine protected areas (MPAs to reduce bycatch and end overfishing of speckled hind (Epinephelus drummondhayi and warsaw grouper (Hyporthodus nigritus in the Atlantic Ocean off the southeastern U.S. We assimilated decades of data from many fishery-dependent, fishery-independent, and anecdotal sources to describe the spatial distribution of these data limited stocks. A spatial classification model was developed to categorize depth-grids based on the distribution of speckled hind and warsaw grouper point observations and identified benthic habitats. Logistic regression analysis was used to develop a quantitative model to predict the spatial distribution of speckled hind and warsaw grouper as a function of depth, latitude, and habitat. Models, controlling for sampling gear effects, were selected based on AIC and 10-fold cross validation. The best-fitting model for warsaw grouper included latitude and depth to explain 10.8% of the variability in probability of detection, with a false prediction rate of 28-33%. The best-fitting model for speckled hind, per cross-validation, included latitude and depth to explain 36.8% of the variability in probability of detection, with a false prediction rate of 25-27%. The best-fitting speckled hind model, per AIC, also included habitat, but had false prediction rates up to 36%. Speckled hind and warsaw grouper habitats followed a shelf-edge hardbottom ridge from North Carolina to southeast Florida, with speckled hind more common to the north and warsaw grouper more common to the south. The proportion of habitat classifications and model-estimated stock contained within established and proposed MPAs was computed. Existing MPAs covered 10% of probable shelf-edge habitats for speckled hind and warsaw grouper, protecting 3-8% of speckled hind and 8% of warsaw grouper stocks. Proposed MPAs could add 24% more probable shelf-edge habitat, and protect an additional

  7. Infection and pathology in Queensland grouper, Epinephelus lanceolatus, (Bloch), caused by exposure to Streptococcus agalactiae via different routes.

    Science.gov (United States)

    Delamare-Deboutteville, J; Bowater, R; Condon, K; Reynolds, A; Fisk, A; Aviles, F; Barnes, A C

    2015-12-01

    Since 2007, 96 wild Queensland groupers, Epinephelus lanceolatus, (Bloch), have been found dead in NE Australia. In some cases, Streptococcus agalactiae (Group B Streptococcus, GBS) was isolated. At present, a GBS isolate from a wild grouper case was employed in experimental challenge trials in hatchery-reared Queensland grouper by different routes of exposure. Injection resulted in rapid development of clinical signs including bilateral exophthalmia, hyperaemic skin or fins and abnormal swimming. Death occurred in, and GBS was re-isolated from, 98% fish injected and was detected by PCR in brain, head kidney and spleen from all fish, regardless of challenge dose. Challenge by immersion resulted in lower morbidity with a clear dose response. Whilst infection was established via oral challenge by admixture with feed, no mortality occurred. Histology showed pathology consistent with GBS infection in organs examined from all injected fish, from fish challenged with medium and high doses by immersion, and from high-dose oral challenge. These experimental challenges demonstrated that GBS isolated from wild Queensland grouper reproduced disease in experimentally challenged fish and resulted in pathology that was consistent with that seen in wild Queensland grouper infected with S. agalactiae.

  8. Immunocytochemical Study on Blood and Organ Suspension of Tiger Grouper (Epinephelus fuscoguttatus Infected with Field Isolate of Viral Nervous Necrosis

    Directory of Open Access Journals (Sweden)

    Artanti Tri Lestari

    2014-11-01

    Full Text Available One potential marine cultures that have been developed and started to show the international market is grouper. Grouper culture can not be separated from factors that can affect disease and thwart cultivation. One of the diseases that has been reported by researchers is viral nervous necrosis (VNN causing mass mortality in fish, especially grouper larvae and juvenile stadia. Laboratory of Balai KIPM kelas l Denpasar develop rapid diagnostic techniques, precise and accurate test using immunocytochemistry of blood and organs as one of the initial inspection. Tiger grouper sized 150-300 g as much as 50 and acclimatized, then 10 fishes used as controls, 40 fishes were injected with inoculum VNN 101.5 reared without water replacement cycle for ten days. Clinical observation and organ sampling performed 12 hours post-infection and consecutive every 12 hours. Blood samples and organs were collected for immunocytochemical (streptavidin-biotin and a confirmatory test using RT - PCR using kit IQ -2000 VNN. Immunocytochemistry and RT-PCR showed positive results against VNN blood smears and suspensions organs of grouper fish with 24 hours post-infection . Based on the test results, the immunocytochemistry test on the blood and organ suspensions can be used as a detection technique VNN which is rapid, precise and accurate.

  9. Comparative Transcriptomic Study of Muscle Provides New Insights into the Growth Superiority of a Novel Grouper Hybrid.

    Science.gov (United States)

    Sun, Ying; Huang, Yu; Hu, Guojun; Zhang, Xinhui; Ruan, Zhiqiang; Zhao, Xiaomeng; Guo, Chuanyu; Tang, Zhujing; Li, Xiaofeng; You, Xinxin; Lin, Haoran; Zhang, Yong; Shi, Qiong

    2016-01-01

    Grouper (Epinephelus spp.) is a group of fish species with great economic importance in Asian countries. A novel hybrid grouper, generated by us and called the Hulong grouper (Hyb), has better growth performance than its parents, E. fuscoguttatus (Efu, ♀) and E. lanceolatus (Ela, ♂). We previously reported that the GH/IGF (growth hormone/insulin-like growth factor) system in the brain and liver contributed to the superior growth of the Hyb. In this study, using transcriptome sequencing (RNA-seq) and quantitative real-time PCR (qRT-PCR), we analyzed RNA expression levels of comprehensive genes in the muscle of the hybrid and its parents. Our data showed that genes involved in glycolysis and calcium signaling in addition to troponins are up-regulated in the Hyb. The results suggested that the activity of the upstream GH/IGF system in the brain and liver, along with the up-regulated glycolytic genes as well as ryanodine receptors (RyRs) and troponins related to the calcium signaling pathway in muscle, led to enhanced growth in the hybrid grouper. Muscle contraction inducing growth could be the major contributor to the growth superiority in our novel hybrid grouper, which may be a common mechanism for hybrid superiority in fishes.

  10. Development of Pedigree Classification Using Microsatellite and Mitochondrial Markers for Giant Grouper Broodstock (Epinephelus lanceolatus Management in Taiwan

    Directory of Open Access Journals (Sweden)

    Hsiao-Che Kuo

    2014-04-01

    Full Text Available Most giant groupers in the market are derived from inbred stock. Inbreeding can cause trait depression, compromising the animals’ fitness and disease resistance, obligating farmers to apply increased amounts of drugs. In order to solve this problem, a pedigree classification method is needed. Here, microsatellite and mitochondrial DNA were used as genetic markers to analyze the genetic relationships among giant grouper broodstocks. The 776-bp fragment of high polymorphic mitochondrial D-loop sequence was selected for measuring sibling relatedness. In a sample of 118 giant groupers, 42 haplotypes were categorized, with nucleotide diversity (π of 0.00773 and haplotype diversity (HD of 0.983. Furthermore, microsatellites were used for investigation of parentage. Six out of 33 microsatellite loci were selected as markers based on having a high number of alleles and compliance with Hardy-Weinberg equilibrium. Microsatellite profiles based on these loci provide high variability with low combined non-exclusion probability, permitting practical use in aquaculture. The method described here could be used to improve grouper broodstock management and lower the chances of inbreeding. This approach is expected to lead to production of higher quality groupers with higher disease resistance, thereby reducing the need for drug application.

  11. Development of pedigree classification using microsatellite and mitochondrial markers for Giant grouper broodstock (Epinephelus lanceolatus) management in Taiwan.

    Science.gov (United States)

    Kuo, Hsiao-Che; Hsu, Hao-Hsuan; Chua, Chee Shin; Wang, Ting-Yu; Chen, Young-Mao; Chen, Tzong-Yueh

    2014-04-30

    Most giant groupers in the market are derived from inbred stock. Inbreeding can cause trait depression, compromising the animals' fitness and disease resistance, obligating farmers to apply increased amounts of drugs. In order to solve this problem, a pedigree classification method is needed. Here, microsatellite and mitochondrial DNA were used as genetic markers to analyze the genetic relationships among giant grouper broodstocks. The 776-bp fragment of high polymorphic mitochondrial D-loop sequence was selected for measuring sibling relatedness. In a sample of 118 giant groupers, 42 haplotypes were categorized, with nucleotide diversity (π) of 0.00773 and haplotype diversity (HD) of 0.983. Furthermore, microsatellites were used for investigation of parentage. Six out of 33 microsatellite loci were selected as markers based on having a high number of alleles and compliance with Hardy-Weinberg equilibrium. Microsatellite profiles based on these loci provide high variability with low combined non-exclusion probability, permitting practical use in aquaculture. The method described here could be used to improve grouper broodstock management and lower the chances of inbreeding. This approach is expected to lead to production of higher quality groupers with higher disease resistance, thereby reducing the need for drug application.

  12. Potato virus Y induced changes in the gene expression of potato (Solanum tuberosum L.)

    NARCIS (Netherlands)

    Pompe-Novak, M.; Gruden, K.; Baebler, P.; Krecic-Stress, H.; Kovac, M.; Jongsma, M.A.; Ravnikar, M.

    2005-01-01

    The tuber necrotic strain of Potato virus Y (PVYNTN) causes potato tuber necrotic ringspot disease in sensitive potato cultivars. Gene expression in the disease response of the susceptible potato (Solanum tuberosum L.) cultivar Igor was investigated at different times after infection, using subtract

  13. Negative regulation of the innate antiviral immune response by TRIM62 from orange spotted grouper.

    Science.gov (United States)

    Yang, Ying; Huang, Youhua; Yu, Yepin; Zhou, Sheng; Wang, Shaowen; Yang, Min; Qin, Qiwei; Huang, Xiaohong

    2016-10-01

    Increased reports uncovered that mammalian tripartite motif-containing 62 (TRIM62) exerts crucial roles in cancer and innate immune response. However, the roles of fish TRIM62 in antiviral immune response remained uncertain. In this study, a TRIM62 gene was cloned from orange spotted grouper (EcTRIM62) and its roles in grouper RNA virus infection was elucidated in vitro. EcTRIM62 shared 99% and 83% identity to bicolor damselfish (Stegastes partitus) and human (Homo sapiens), respectively. Sequence alignment indicated that EcTRIM62 contained three domains, including a RING-finger domain, a B-box domain and a SPRY domain. In healthy grouper, the transcript of EcTRIM62 was predominantly detected in brain and liver, followed by heart, skin, spleen, fin, gill, intestine, and stomach. Subcellular localization analysis indicated that bright fluorescence spots were observed in the cytoplasm of EcTRIM62-transfected grouper spleen (GS) cells. During red-spotted grouper nervous necrosis (RGNNV) infection, overexpression of EcTRIM62 significantly enhanced the severity of CPE and increased viral gene transcriptions. Furthermore, the ectopic expression of EcTRIM62 significantly decreased the transcription level of interferon signaling molecules, including interferon regulatory factor 3 (IRF3), IRF7, interferon-stimulated gene 15 (ISG15), melanoma differentiation-associated protein 5 (MDA5), myxovirus resistance gene MXI, and MXII, suggesting that the negative regulation of interferon immune response by EcTRIM62 might directly contributed to its enhancing effect on RGNNV replication. Furthermore, our results also demonstrated that overexpression of EcTRIM62 was able to differently regulate the expression levels of pro-inflammation cytokines. In addition, we found the ectopic expression of EcTIRM62 negatively regulated MDA5-, but not mediator of IRF3 activation (MITA)-induced interferon immune response. Further studies showed that the deletion of RING domain and SPRY domain

  14. Comparing Host Plant Resistance, Engineered Resistance, and Insecticide Treatment for Control of Colorado Potato Beetle and Potato Leafhopper in Potatoes

    Directory of Open Access Journals (Sweden)

    Gerald M. Ghidiu

    2011-01-01

    Full Text Available The Colorado potato beetle, Leptinotarsa decemlineata (Say Order Coleoptera and the potato leafhopper, Empoasca fabae (Harris Order Homoptera, are the major insect pests of potato in eastern North America. In two years of field trials, we compared the effectiveness of three pest management options for the control of Colorado potato beetle and potato leafhopper: natural host plant resistance (glandular trichomes, engineered resistance (Bacillus thuringiensis [Bt] Berliner cry3A gene and a susceptible potato cultivar (Superior with an at-planting application of the insecticide thiamethoxam. Similar and acceptable control of the Colorado potato beetle larvae was obtained with the Bt-cry3A lines and the thiamethoxam treated “Superior” variety. The glandular trichome cultivar had significantly less Colorado potato beetle damage than did the untreated “Superior” in 2004, although damage was significantly greater than in the Bt-cry3A lines and the insecticide-treated potatoes for both years, and was the only treatment that consistently had very little potato leafhopper damage. These data demonstrate that although each type of host plant resistance mechanism (Bt-cry3A or glandular trichomes was as effective as the chemical control against one of the insects, neither provides adequate resistance to both Colorado potato beetle and potato leaf hopper.

  15. The extrusion properties of potato granules

    OpenAIRE

    Kooi, Eng Teong

    1982-01-01

    Potato granules from different sources were found, on extrusion, to produce potato snacks of variable quality. In some instances strip formation was unsatisfactory, in other instances blistering of the snack occurred on frying. In total, about 20-25 batches of potato granules were examined and classified in relation to these two phenomena. The amylose/amylopectin ratios of these samples of potato granules were determined by the semi-micro potentiometric iodine titration technique, but it was ...

  16. Comparing catch orientation among Minnesota walleye, northern pike, and bass anglers

    Science.gov (United States)

    Schroeder, Susan A.; Fulton, David C.

    2013-01-01

    We compared the catch orientations of Minnesota walleye (Sander vitreus), northern pike (Esox lucius), largemouth bass (Micropterus salmoides), and smallmouth bass (Micropterus dolomieu) anglers. Results were derived from 2009, 2010, and 2012 surveys of anglers targeting these different species. Consistent with previous research, we identified four dimensions of anglers’ catch orientation: (a) catching something, (b) catching big fish, (c) catching many fish, and (d) keeping fish. Walleye anglers were the most motivated to keep fish, while northern pike anglers were more oriented toward catching big fish. Largemouth bass anglers, and to a lesser extent smallmouth bass anglers, were also oriented toward catching big fish. Bass anglers reported the lowest interest in keeping fish. An orientation to keep fish was negatively related to more restrictive management actions, regardless of species. A stronger orientation to catch big fish was associated with support for increased harvest restrictions only for northern pike and smallmouth bass.

  17. Sustainable potato production: global case studies

    Science.gov (United States)

    Potato (Solanum tuberosum L.) is grown in over 100 countries throughout the world. As a staple food, potato is the fourth most important crop after rice, wheat, and maize, and has historically contributed to food and nutrition security in the world. Global interest in potato increased sharply in 200...

  18. Reinventing potato at the diploid level

    Science.gov (United States)

    We are positioned to revolutionize potato by reconstructing it as a diploid inbred-line based crop. Currently, potato is an asexually propagated cross-pollinated tetraploid crop, for which breeding methodologies have not changed substantially in 100 years. Current methods for creating new potato cul...

  19. 7 CFR 945.5 - Potatoes.

    Science.gov (United States)

    2010-01-01

    ... 7 Agriculture 8 2010-01-01 2010-01-01 false Potatoes. 945.5 Section 945.5 Agriculture Regulations... Orders; Fruits, Vegetables, Nuts), DEPARTMENT OF AGRICULTURE IRISH POTATOES GROWN IN CERTAIN DESIGNATED COUNTIES IN IDAHO, AND MALHEUR COUNTY, OREGON Order Regulating Handling Definitions § 945.5 Potatoes...

  20. Orange-spotted grouper (Epinephelus coioides) adiponectin receptors: molecular characterization, mRNA expression, and subcellular location.

    Science.gov (United States)

    Qin, Chaobin; Wang, Bin; Sun, Caiyun; Jia, Jirong; Li, Wensheng

    2014-03-01

    Adiponectin is an abundantly secreted adipokine from adipose tissue in mammals, which plays important roles in the regulation of glucose and lipid metabolism. The biological function of adiponectin is mediated by at least two receptors (AdipoR1 and AdipoR2). Although both of them were identified in mammals, there are few researches about adiponectin and its receptors in teleosts. In this study, two types of adiponectin receptors have been isolated and characterized in the orange-spotted grouper (Epinephelus coioides). The cDNAs of grouper AdipoR1 and AdipoR2 are 1444 and 2034 bp in length, encoding proteins of 376 amino acids and 375 amino acids, respectively. Multiple alignment results showed that there was a variable region at the N-terminal of AdipoR1/R2, which has never been reported. Both AdipoR1 and AdipoR2 were found to be widely expressed in various tissues of grouper. Compared to AdipoR2, AdipoR1 expressed at higher levels in the nervous system and pituitary gland, but at lower levels in some peripheral tissues, including heart, liver, adipose tissue, stomach, intestine and especially gonad. Fasting and refeeding experiments showed that the mRNA expressions of AdipoR1/R2 were up-regulated by fasting in the muscle and adipose tissue of grouper, and restored rapidly to normal levels after refeeding. However, the mRNA expressions of AdipoR1/R2 in the hypothalamus and liver of grouper were insensitive to fasting. By indirect immunofluorescence, we demonstrated that grouper AdipoR1/R2 were integral membrane proteins; the C-terminals were extracellular, while the N-terminals were intracellular.

  1. Microbiological quality of five potato products obtained at retail markets.

    OpenAIRE

    Duran, A P; Swartzentruber, A; Lanier, J M; Wentz, B A; Schwab, A H; Barnard, R J; Read, R B

    1982-01-01

    The microbiological quality of frozen hash brown potatoes, dried hash brown potatoes with onions, frozen french fried potatoes, dried instant mashed potatoes, and potato salad was determined by a national sampling at the retail level. A wide range of results was obtained, with most sampling units of each products having excellent microbiological quality. Geometric mean aerobic plate counts were as follows: dried hash brown potatoes, 270/g; frozen hash brown potatoes with onions, 580/g; frozen...

  2. Spatiotemporal patterns and habitat associations of smallmouth bass (Micropterus dolomieu) invading salmon-rearing habitat

    Science.gov (United States)

    Lawrence, David J.; Olden, Julian D.; Torgersen, Christian E.

    2012-01-01

    1. Smallmouth bass (Micropterus dolomieu) have been widely introduced to fresh waters throughout the world to promote recreational fishing opportunities. In the Pacific Northwest (U.S.A.), upstream range expansions of predatory bass, especially into subyearling salmon-rearing grounds, are of increasing conservation concern, yet have received little scientific inquiry. Understanding the habitat characteristics that influence bass distribution and the timing and extent of bass and salmon overlap will facilitate the development of management strategies that mitigate potential ecological impacts of bass. 2. We employed a spatially continuous sampling design to determine the extent of bass and subyearling Chinook salmon (Oncorhynchus tshawytscha) sympatry in the North Fork John Day River (NFJDR), a free-flowing river system in the Columbia River Basin that contains an upstream expanding population of non-native bass. Extensive (i.e. 53 km) surveys were conducted over 2 years and during an early and late summer period of each year, because these seasons provide a strong contrast in the river's water temperature and flow condition. Classification and regression trees were applied to determine the primary habitat correlates of bass abundance at reach and channel-unit scales. 3. Our study revealed that bass seasonally occupy up to 22%of the length of the mainstem NFJDR where subyearling Chinook salmon occur, and the primary period of sympatry between these species was in the early summer and not during peak water temperatures in late summer. Where these species co-occurred, bass occupied 60–76% of channel units used by subyearling Chinook salmon in the early summer and 28–46% of the channel units they occupied in the late summer. Because these rearing salmon were well below the gape limitation of bass, this overlap could result in either direct predation or sublethal effects of bass on subyearling Chinook salmon. The upstream extent of bass increased 10–23 km (2009

  3. 77 FR 52261 - Fisheries of the Caribbean, Gulf of Mexico, and South Atlantic; South Atlantic Snapper-Grouper...

    Science.gov (United States)

    2012-08-29

    ... Light, North Carolina. This closure is necessary to protect the black sea bass resource. DATES: This...' N. lat., the latitude of Cape Hatteras Light, North Carolina, south to the boundary between the.... From Cape Hatteras Light, North Carolina, through Maine, black sea bass are managed jointly by the...

  4. Sensitivity of juvenile striped bass to chemicals used in aquaculture

    Energy Technology Data Exchange (ETDEWEB)

    Bills, T.D.; Marking, L.L.; Howe, G.E.

    1993-01-01

    Efforts to restore anadromous striped bass (Morone saxatilis) populations by the U.S. Fish and Wildlife Service and other agencies over the past 20 years have concentrated on hatchery culture to supplement dwindling natural reproduction. Adult fish captured for artificial spawning are stressed by handling and crowding in rearing ponds and are often exposed to therapeutants, anesthetics, disinfectants, and herbicides used in fish culture. The authors determined the toxicity of 17 fishery chemicals (chloramine-T, erythromycin, formalin, Hyamine 3500, Roccal, malachite green, sulfamerazine, benzocaine, etomidate, Finquel (MS-222), metomidate, quinaldine sulfate, chlorine, potassium permanganate, Aquazine, copper sulfate, and Rodeo) to striped bass fry (average weight = 1 g) in reconstituted water (total hardness 40 mg/L) at 12 degrees C. The 96-h LC50's (concentration calculated to produce 50% mortality in a population) ranged from 0.129 mg/L for malachite green to 340 mg/L for erythromycin.

  5. Teaching Fourier Analysis and Wave Physics with the Bass Guitar

    CERN Document Server

    Courtney, M; Courtney, Michael; Althausen, Norm

    2006-01-01

    This article describes a laboratory or demonstration technique employing the bass guitar and a Vernier LabPro (or a PC soundcard) for teaching wave physics and introducing Fourier analysis. The Fourier transform of an open string provides a demonstration of oscillatory modes out to the 20th harmonic consistent with expectations containing a fundamental frequency and harmonics. The playing of "harmonics" (suppressing resonant modes by lightly touching the string to enforce nodes at desired locations) demonstrates oscillations made up (mostly) of individual modes. Students see that the complete set of Fourier components (fundamental and harmonics) present on the open string can be explicitly connected with individual resonant frequencies as described in typical textbook discussions of natural frequencies of waves on a string. The use of a bass guitar rather than the six string electric guitar allows higher harmonics to be individually excited, and it is also easier for students to play the harmonics themselves.

  6. Les génériques de Saul Bass

    OpenAIRE

    2011-01-01

    Nous proposons ici de faire connaître la conception du générique de Saul Bass, reconnu à juste titre comme l’inventeur du générique moderne dans les années 1950 aux États-Unis et comme l’auteur de 60 génériques dont l’époustouflant Vertigo. Bien que la notion de geste ne soit jamais utilisée par Saul Bass, nous proposons de montrer qu’elle est à la source des opérations de pensée (symbole) et d’affect de chaque générique. La notion de geste permet de rompre tout autant avec la notion de symbo...

  7. Enzymatic hydrolysis of potato pulp

    Directory of Open Access Journals (Sweden)

    Mariusz Lesiecki

    2012-03-01

    Full Text Available Background. Potato pulp constitutes a complicated system of four types of polysaccharides: cellulose, hemicellulose, pectin and starch. Its composition makes it a potential and attractive raw material for the production of the second generation bioethanol. The aim of this research project was to assess the usefulness of commercial enzymatic preparations for the hydrolysis of potato pulp and to evaluate the effectiveness of hydrolysates obtained in this way as raw materials for ethanol fermentation. Material  and methods. Sterilised potato pulp was subjected to hydrolysis with commercial enzymatic preparations. The effectiveness of the preparations declared as active towards only one fraction of potato pulp (separate amylase, pectinase and cellulase activity and mixtures of these preparations was analysed. The monomers content in hydrolysates was determined using HPLC method. Results.  The application of amylolytic enzymes for potato pulp hydrolysis resulted in the release of only 18% of raw material with glucose as the dominant (77% constituent of the formed product. In addition, 16% galactose was also determined in it. The hydrolysis of the cellulose fraction yielded up to 35% raw material and the main constituents of the obtained hydrolysate were glucose (46% and arabinose (40%. Simultaneous application of amylolytic, cellulolytic and pectinolytic enzymes turned out to be the most effective way of carrying out the process as its efficiency in this case reached 90%. The obtained hydrolysate contained 63% glucose, 25% arabinose and 12% other simple substances. Conclusion. The application of commercial enzymatic preparations made it possible to perform potato pulp hydrolysis with 90% effectiveness. This was achieved by the application of a complex of amylolytic, cellulolytic and pectinolytic enzymes and the hydrolysate obtained in this way contained, primarily, glucose making it a viable substrate for ethanol fermentation.

  8. Noise Impact on European Sea Bass Behavior: Temporal Structure Matters.

    Science.gov (United States)

    Neo, Yik Yaw; Seitz, Johanna; Kastelein, Ronald A; Winter, Hendrik V; Cate, Carel Ten; Slabbekoorn, Hans

    2016-01-01

    Anthropogenic sounds come in different forms, varying not only in amplitude and frequency spectrum but also in temporal structure. Although fish are sensitive to the temporal characteristics of sound, little is known about how their behavior is affected by anthropogenic sounds of different temporal patterns. We investigated this question using groups of Dicentrarchus labrax (European sea bass) in an outdoor basin. Our data revealed that the temporal pattern of sound exposure is important in noise impact assessments.

  9. Mixtures of Estrogenic Chemicals Enhance Vitellogenic Response in Sea Bass

    OpenAIRE

    Correia, AD; Freitas, S.; Scholze, M; Gonçalves, J; Booij, P.; Lamoree, MH; Mañanós, E; Reis-Henriques, MA

    2007-01-01

    BACKGROUND: The potential impact of natural and synthetic estrogens on aquatic ecosystems has attracted considerable attention because it is currently accepted that their joint effects are more severe when they are present in mixtures. Although it is well-known that they occur as mixtures in the marine environment, there is little information about the combined effects of estrogenic chemicals on marine biota. OBJECTIVE: In 14-day tests with juvenile sea bass, we analyzed singly and in combina...

  10. NEW CAR DEMAND MODELING AND FORECASTING USING BASS DIFFUSION MODEL

    Directory of Open Access Journals (Sweden)

    Zuhaimy Ismail

    2013-01-01

    Full Text Available Forecasting model of new product demand has been developed and applied to forecast new vehicle demand in Malaysia. Since the publication of the Bass model in 1969, innovation of new diffusion theory has sparked considerable research among marketing science scholars, operational researchers and mathematicians. The building of Bass diffusion model for forecasting new product within the Malaysian society is presented in this study. The proposed model represents the spread level of new Proton car among a given set of the society in terms of a simple mathematical function that elapsed since the introduction of the new car. With the limited amount of data available for the new car, a robust Bass model was developed to forecast the sales volume. A procedure of the proposed diffusion model was designed and the parameters were estimated. Results obtained by applying the proposed model and numerical calculation shows that the proposed diffusion model is robust and effective for forecasting demand of new Proton car. The proposed diffusion model is shown to forecast more effectively and accurately even with insufficient previous data on the new product.

  11. An Investigation into the Uptake of Contaminants in Largemouth Bass and Sediment from the Lower Tombigbee and Mobile Rivers, 1992

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — This report summarizes a study with the following results: 1. Mercury was detected in all largemouth bass composite samples, with highest levels found in bass...

  12. Development of novel tetra- and trinucleotide microsatellite markers for giant grouper Epinephelus lanceolatus using 454 pyrosequencing.

    Science.gov (United States)

    Kim, Keun-Sik; Noh, Choong Hwan; Moon, Shin-Joo; Han, Seung-Hee; Bang, In-Chul

    2016-06-01

    Giant grouper (Epinephelus lanceolatus) is a commercially important species, but its wild population has recently been classified as vulnerable. This species has significant potential for use in aquaculture, though a greater understanding of population genetics is necessary for selective breeding programs to minimize kinship for genetically healthy individuals. High-throughput pyrosequencing of genomic DNA was used to identify and characterize novel tetra- and trinucleotide microsatellite markers in giant grouper from Sabah, Malaysia. In total, of 62,763 sequences containing simple sequence repeats (SSRs) were obtained, and 78 SSR loci were selected to possibly contain tetra- and trinucleotide repeats. Of these loci, 16 had tetra- and 8 had trinucleotide repeats, all of which exhibited polymorphisms within easily genotyped regions. A total of 143 alleles were identified with an average of 5.94 alleles per locus, with mean observed and expected heterozygosities of 0.648 and 0.620, respectively. Among of them, 15 microsatellite markers were identified without null alleles and with Hardy-Weinberg equilibrium. These alleles showed a combined non-exclusion probability of 0.01138. The probability of individual identification (PID) value combined with in descending order 12 microsatellite markers was 0.00008, which strongly suggests that the use of the microsatellite markers developed in this study in various combinations would result in a high resolution method for parentage analysis and individual identification. These markers could be used to establish a broodstock management program for giant grouper and to provide a foundation for genetic studies such as population structure, parentage analysis, and kinship selection.

  13. FERMENTED BLOOD MEAL USE FOR TIGER GROUPER, Epinephelus fuscoguttatus GROW-OUT DIET

    Directory of Open Access Journals (Sweden)

    Usman Usman

    2007-06-01

    Full Text Available The experiment aimed to evaluate the optimal level of fermented blood meal used in grow-out diets for tiger grouper, as an alternative protein source to fish meal. Juvenile tiger grouper, initial weight 31.1 ± 2.1 g, were stocked into 1 m x 1 m x 2 m floating net cages at 20 fish cage-1. The treatment applied was isoprotein and isocaloric diets formulated to contain fermented blood meal (FBM of 0%, 7.5%, 15.0%, 22.5%, and 30.0% replacement of fish meal protein. The diets were fed to the fish twice a day to satiation for 20 weeks. Based on the Tukey test, the fish fed 0%–15.0% FBM demonstrated similar performance (P>0.05 to those fed the control diet (FBM0 in terms of specific growth rate, weight gain, and feed and protein efficiency. Specific growth rate, weight gain, feed efficiency and protein efficiency of the fish fed 22.5%–30.5% FBM were significantly lower (P<0.05 than those of the fish fed control diet (FBM0. However, there was a significant culvilinier decliner in overall fish performance with increasing inclusion of FPM and most notable for weight gain, feed efficiency and feed consumption. Based on regression analysis, the asymptote where fish growth deteriorates as a function of FBM inclusion was determined to be 8.9%. Tiger grouper diets incorporating up to 9% FBM as fish meal replacement had no adverse affects on fish growth and survival.

  14. Substitution of fishmeal with soybean meal in humpback Grouper, Cromileptes altivelis juvenile diets supplemented with phytase

    Directory of Open Access Journals (Sweden)

    Rachman Syah

    2006-12-01

    Full Text Available Feeding experiments were conducted to evaluate the effects of replacing fishmeal with soybean meal in diet on growth of humpback grouper. Fifteen cages of 1 x 1 x 1.2 m3 each stocked with 16 humpback grouper juveniles (61.3 ± 0.4 g/pc were set up randomly in seawater. Fish were fed to satiation twice daily for 112 days. The control diet contained 61.9% fishmeal (63.34% crude protein. Four isonitrogenous (48% crude protein and isocaloric (4.7 kcal/g feed diets supplemented with commercial phytase “Rhonozyme-P” at 0.075% were formulated to contain different levels (8%, 16%, 24%, and 32% soybean meal (43.65% crude protein as a partial replacement for fishmeal. These diets contained total phosphorus levels between 3.6—4.5 (±0.4 % and 0.7—1.5 (±0.04 % available phosphorus. Replacement of fishmeal with soybean meal (8 to 32% replacement was not significantly different (P>0.05 to the control diet on daily growth rate (DGR, food conversion ratio (FCR, protein efficiency ratio (PER, and daily food consumption (DFC. However, the dietary levels of soybean meal significantly affected (P<0.05 whole body protein and phosphorus retention (Table 1. These data suggest that addition of phytase in diets could improve protein and phosphorus availability and reduce nitrogen and phosphorus loading in the environment. Phytase can therefore play an important role in formulating eco-friendly feed for humpback grouper. Based on P loading, supplementation of phytase enable up to 24% fishmeal replacement with soybean meal.

  15. High density culture of white bass X striped bass fingerlings in raceways using power plant heated effluent

    Energy Technology Data Exchange (ETDEWEB)

    Collins, C.M.; Burton, G.L.; Schweinforth, R.L.

    1983-06-01

    White bass (Morone chrysops) X striped bass (M. saxatilis) hybrids weighing 1691/lb were initially stocked in five 24 ft/sup 3/ floating screen cages for 20 days. Hybrids averaging one inch in total length and 361 fish/lb were released in four 614 ft/sup 3/ concrete raceways. Two stocking densities, 2.6 and 5.1 fish/ft/sup 3/, were evaluated in the 94-day study using a flow rate of 300 gpm/raceway. Water temperatures averaged 79/sup 0/F and water quality was adequate throughout the production period. Fish were hand fed to satiation daily. Columnaris and Aeromonas hydrophila caused the most serious disease problems. Gas supersaturation was suspect in high mortality levels during cage culture of hybrid bass fry. Cannibalism may have been responsible for unaccountable losses prior to raceway stocking and at harvest. The study yielded 5773 hybrids weighing 658 lb. The high density treatment showed greater weight gain, average weight, average length and percent survival as well as improved food conversion. Results suggest that higher stocking densities and periodic grading may increase production and suppress cannibalism. 10 references, 3 figures, 3 tables.

  16. JNK1 derived from orange-spotted grouper, Epinephelus coioides, involving in the evasion and infection of Singapore grouper iridovirus (SGIV

    Directory of Open Access Journals (Sweden)

    Minglan eGuo

    2016-02-01

    Full Text Available c-Jun N-terminal kinase (JNK regulates cellular responses to various extracellular stimuli, environmental stresses, pathogen infections, and apoptotic agents. Here, a JNK1, Ec-JNK1, was identified from orange-spotted grouper, Epinephelus coioides. Ec-JNK1 has been found involving in the immune response to pathogen challenges in vivo, and the infection of Singapore grouper iridovirus (SGIV and SGIV-induced apoptosis in vitro. SGIV infection activated Ec-JNK1, of which phosphorylation of motif TPY is crucial for its activity. Over-expressing Ec-JNK1 phosphorylated transcription factors c-Jun and promoted the infection and replication of SGIV, while partial inhibition of the phosphorylation of Ec-JNK1 showed the opposite effects by over-expressing the dominant-negative EcJNK1-△183-185 mutant. Interestingly, SGIV enhanced the viral infectivity by activating Ec-JNK1 which in turn drastically inhibited the antiviral responses of type 1 IFN, indicating that Ec-JNK1 could be involved in blocking IFN signaling during SGIV infection. In addition, Ec-JNK1 enhanced the activation of AP-1, p53 and NF-κB, and resulted in increasing the levels of SGIV-induced cell death. The caspase 3-dependent activation correlated with the phosphorylation of Ec-JNK1 and contributed to SGIV-induced apoptosis. Taken together, SGIV modulated the phosphorylation of Ec-JNK1 to inactivate the antiviral signaling, enhance the SGIV-induced apoptosis and activate transcription factors for efficient infection and replication. The positive cooperativity molecular mechanism mediated by Ec-JNK1 contributes to the successful evasion and infection of iridovirus pathogenesis.

  17. JNK1 Derived from Orange-Spotted Grouper, Epinephelus coioides, Involving in the Evasion and Infection of Singapore Grouper Iridovirus (SGIV).

    Science.gov (United States)

    Guo, Minglan; Wei, Jingguang; Huang, Xiaohong; Zhou, Yongcan; Yan, Yang; Qin, Qiwei

    2016-01-01

    c-Jun N-terminal kinase (JNK) regulates cellular responses to various extracellular stimuli, environmental stresses, pathogen infections, and apoptotic agents. Here, a JNK1, Ec-JNK1, was identified from orange-spotted grouper, Epinephelus coioides. Ec-JNK1 has been found involving in the immune response to pathogen challenges in vivo, and the infection of Singapore grouper iridovirus (SGIV) and SGIV-induced apoptosis in vitro. SGIV infection activated Ec-JNK1, of which phosphorylation of motif TPY is crucial for its activity. Over-expressing Ec-JNK1 phosphorylated transcription factors c-Jun and promoted the infection and replication of SGIV, while partial inhibition of the phosphorylation of Ec-JNK1 showed the opposite effects by over-expressing the dominant-negative EcJNK1-Δ183-185 mutant. Interestingly, SGIV enhanced the viral infectivity by activating Ec-JNK1 which in turn drastically inhibited the antiviral responses of type 1 IFN, indicating that Ec-JNK1 could be involved in blocking IFN signaling during SGIV infection. In addition, Ec-JNK1 enhanced the activation of AP-1, p53, and NF-κB, and resulted in increasing the levels of SGIV-induced cell death. The caspase 3-dependent activation correlated with the phosphorylation of Ec-JNK1 and contributed to SGIV-induced apoptosis. Taken together, SGIV modulated the phosphorylation of Ec-JNK1 to inactivate the antiviral signaling, enhance the SGIV-induced apoptosis and activate transcription factors for efficient infection and replication. The "positive cooperativity" molecular mechanism mediated by Ec-JNK1 contributes to the successful evasion and infection of iridovirus pathogenesis.

  18. Grouper TRIM13 exerts negative regulation of antiviral immune response against nodavirus.

    Science.gov (United States)

    Huang, Youhua; Yang, Min; Yu, Yepin; Yang, Ying; Zhou, Linli; Huang, Xiaohong; Qin, Qiwei

    2016-08-01

    The tripartite motif (TRIM)-containing proteins have attracted particular attention to their multiple functions in different biological processes. TRIM13, a member of the TRIM family, is a RING domain-containing E3 ubiquitin ligase which plays critical roles in diverse cellular processes including cell death, cancer and antiviral immunity. In this study, a TRIM13 homolog from orange spotted grouper, Epinephelus coioides (EcTRIM13) was cloned and characterized. The full-length of EcTRIM13 cDNA encoded a polypeptide of 399 amino acids which shared 81% identity with TRIM13 homolog from large yellow croaker (Larimichthys crocea). Amino acid alignment analysis showed that EcTRIM13 contained conserved RING finger and B-box domain. Expression patterns analysis indicated that EcTRIM13 was abundant in liver, spleen, kidney, intestine and gill. Moreover, the transcript of EcTRIM13 in grouper spleen was differently regulated after injection with Singapore grouper iridovirus (SGIV) or polyinosin-polycytidylic acid (poly I:C). Under fluorescence microscopy, we observed the tubular structure in wild type EcTRIM13 transfected cells, but the RING domain mutant resulted in the fluorescence distribution was changed and the bright punctate fluorescence was evenly situated throughout the cytoplasm, suggesting that the RING domain was essential for its accurate localization. Overexpression of EcTRIM13 in vitro obviously increased the replication of red spotted grouper nervous necrosis virus (RGNNV), and the enhancing effect of EcTRIM13 on virus replication was affected by the RING domain. Furthermore, the ectopic expression of EcTRIM13 not only negatively regulated the interferon promoter activity induced by interferon regulator factor (IRF) 3, IRF7, and melanoma differentiation-associated protein 5 (MDA5), but also decreased the expression of several interferon related factors. In addition, the overexpression of EcTRIM13 also differently regulated the transcription of pro

  19. Hydroacoustics for the discovery and quantification of Nassau grouper ( Epinephelus striatus) spawning aggregations

    Science.gov (United States)

    Egerton, J. P.; Johnson, A. F.; Le Vay, L.; McCoy, C. M.; Semmens, B. X.; Heppell, S. A.; Turner, J. R.

    2017-06-01

    Fish spawning aggregations (FSAs) are vital life-history events that need to be monitored to determine the health of aggregating populations; this is especially true of the endangered Nassau grouper ( Epinephelus striatus). Hydroacoustics were used to locate Nassau grouper FSAs at sites on the west end of Little Cayman (LCW), and east ends of Grand Cayman (GCE) and Cayman Brac (CBE). Fish abundance and biomass at each FSA were estimated via echo integration and FSA extent. Acoustic mean fish abundance estimates (±SE) on the FSA at LCW (893 ± 459) did not differ significantly from concurrent SCUBA estimates (1150 ± 75). Mean fish densities (number 1000 m-3) were significantly higher at LCW (33.13 ± 5.62) than at the other sites (GCE: 7.01 ± 2.1, CBE: 4.61 ± 1.16). We investigate different acoustic post-processing options to obtain target strength (TS), and we examine the different TS to total length (TL) formulas available. The SCUBA surveys also provided measures of TL through the use of laser callipers allowing development of an in situ TS to TL formula for Nassau grouper at the LCW FSA. Application of this formula revealed mean fish TL was significantly higher at LCW (65.4 ± 0.7 cm) than GCE (60.7 ± 0.4 cm), but not CBE (61.1 ± 2.5 cm). Use of the empirical TS to TL formula resulted in underestimation of fish length in comparison with diver measurements, highlighting the benefits of secondary length data and deriving specific TS to TL formulas for each population. FSA location examined with reference to seasonal marine protected areas (Designated Grouper Spawning Areas) showed FSAs were partially outside these areas at GCE and very close to the boundary at CBE. As FSAs often occur at the limits of safe diving operations, hydroacoustic technology provides an alternative method to monitor and inform future management of aggregating fish species.

  20. 7 CFR 51.1578 - Off-Grade potatoes.

    Science.gov (United States)

    2010-01-01

    ... 7 Agriculture 2 2010-01-01 2010-01-01 false Off-Grade potatoes. 51.1578 Section 51.1578... STANDARDS) United States Consumer Standards for Potatoes Off-Grade § 51.1578 Off-Grade potatoes. Potatoes which fail to meet the requirements of any of the foregoing grades shall be Off-Grade potatoes...

  1. The evolution of potato breeding

    Science.gov (United States)

    Potato cultivars in most regions of the world are tetraploid and clonally propagated. For over a century, the breeding strategy has been phenotypic recurrent selection. However, the polyploid nature of the crop prevents breeders from eliminating deleterious alleles and assembling positive alleles fo...

  2. Acrylamide in Fried Potato Products

    NARCIS (Netherlands)

    Luning, Pieternel; Sanny, Maimunah

    2016-01-01

    High acrylamide levels have been detected in fried potato products. Dietary intake studies observed large differences in acrylamide between single foodstuffs, within food categories, and within batches of similarly processed products. FAO/WHO emphasized that causes of variation need to be underst

  3. Acrylamide in Fried Potato Products

    NARCIS (Netherlands)

    Luning, Pieternel; Sanny, Maimunah

    2016-01-01

    High acrylamide levels have been detected in fried potato products. Dietary intake studies observed large differences in acrylamide between single foodstuffs, within food categories, and within batches of similarly processed products. FAO/WHO emphasized that causes of variation need to be

  4. Growth of potatoes for CELSS

    Science.gov (United States)

    Tibbitts, T. W.; Cao, W.; Wheeler, R. M.

    1994-01-01

    This report summarizes research on the utilization of white potatoes (Solanum tuberosum L.) for space life support systems at the University of Wisconsin-Madison over the period of 1984 to 1993. At full maturity the tuber productivity was 37.5 gm(exp -2) d(exp -1), equating to a growing area requirement for one human (2800 kcal d(exp -1)) of 10.1 m(exp -2). A recirculating nutrient system using slanted trays produced best potato growth and tuber yields when a 2-3 cm layer of gravel or arcillite media was utilized. Potato production was close to maximum under lighting levels of 400 micromol m(exp -2) s(exp -1) of photosynthetic photo flux (PPF) for 24 hours or 800 micromol m(exp -2) s(exp -1) for 12 hours, alternating diurnal temperatures of 22 C and 14 C, relative humidity of 85 percent, and a carbon dioxide level of 1000 micromol m(exp -1). The range of effective concentrations of each separate nutrient is reported. The extensive studies with potatoes in this project have demonstrated that this crop has high productivity of nutritous tubers with a high harvest index in controlled environments, and can fulfill a significant portion of the energy and protein requirements for humans in space.

  5. Reproducción natural controlada del black bass Micropterus salmoides - Controlled natural reproduction of black bass Micropterus salmoides

    Directory of Open Access Journals (Sweden)

    Amaral Junior, Hilton

    2009-09-01

    Full Text Available ResumenPara viabilizar la reproducción, larvicutura y alevinaje del Black bass, en la región sur de Brasil, se ha buscado adaptar una tecnología, desarrollada por el Centro Nacional de Acuicultura Piscifactoría las Vegas del Guadiana Badajoz/España. Consiste en controlar el ambiente de desove, utilizando estanques con nidales, para el desove del Black bass. Optimizando esta tecnología, desarrollamos una técnica de adaptación del Black bass al cultivo intensivo durante el período de invierno, ofreciendo un pienso de un 40% de proteína cruda y zooplancton (Daphnia sp.. Se dejan los reproductores en un mismo estanque de engorda en sistema extensivo, y son adaptados para un sistema intensivo de cultivo, en estanques de hormigón con entrada y salida del agua. Se acondicionan reproductores machos y hembras, durante los meses de invierno. En la primavera, se abren sucesivamente las compuertas de comunicación del departamentocentral, con los estanques frezaderos. En estos estanques frezaderos,se colocan nidales de grava para la puesta de las hembras. Pasado elperíodo de ocupación cíclica de los estanques de desove, losreproductores vuelven al departamento central. Después de laeclosión, las larvas son alimentadas con pienso molido a un 48% deproteína cruda con una oferta de un 10% de su peso y zooplancton Daphina sp. Los alevines se quedan alojados en estanques de tierrapara el período de engorda.SummaryIn order to make reproduction, larval and fingerling rearing of BlackBass in the south region of Brazil, we try to adapt a technologydeveloped by Centro Nacional de Aquicultura Piscifactoria Las Vegasdel Guadiana, Badajoz, Espanha. The technique consists in controllingthe spawning environment with a tank containing nests. To optimizethis technology, we develop a technique to adapt the black bass in aintensive culture during winter, providing food with 40% proteine andzooplankton (Daphnia sp.. The spawners are manteined in the

  6. 77 FR 59129 - Fisheries of the Caribbean, Gulf of Mexico, and South Atlantic; Snapper-Grouper Fishery Off the...

    Science.gov (United States)

    2012-09-26

    ... National Oceanic and Atmospheric Administration 50 CFR Part 622 RIN 0648-AY74 Fisheries of the Caribbean... and imported groupers, snappers, and other fish. Further, most of the important inputs (e.g., fuel... Rico, Reporting and recordkeeping requirements, Virgin Islands. Dated: September 20, 2012. Alan...

  7. 75 FR 57734 - Fisheries of the Caribbean, Gulf of Mexico, and South Atlantic; Snapper-Grouper Fishery off the...

    Science.gov (United States)

    2010-09-22

    ...-grouper species, eight of which are undergoing overfishing; specify recreational and commercial... procedure. The actions contained in Amendment 17B are intended to address overfishing of eight snapper... stock or stock complex in an FMP is undergoing overfishing, the FMP must establish by 2010 a...

  8. 76 FR 66273 - Snapper-Grouper Fishery Off the Southern Atlantic States and Coral and Coral Reefs Fishery in the...

    Science.gov (United States)

    2011-10-26

    ... Atlantic States and Coral and Coral Reefs Fishery in the South Atlantic; Exempted Fishing Permit AGENCY... conditions, various species of reef fish and live rock in Federal waters off North Carolina. The specimens... Plan (FMP) for the Snapper-Grouper Fishery of the South Atlantic Region and the FMP for Coral, Coral...

  9. A record of an adult Warsaw grouper, Hyporthodus nigritus (Perciformes: Ephinephelidae), in a deep reef of the Colombian Caribbean

    OpenAIRE

    Bustos Montes, Diana; Viaña Tous, Jorge; Acero-P., Arturo; Pardo, Elkin R.; Garrido, Manuel; Rueda, Mario; Alonso, David

    2013-01-01

    The Warsaw grouper (Hyporthodus nigritus) has been reported from the western Atlantic between Massachusetts (United States) and Mexico, including a few South American reports to Brasil. In Colombia a juvenile specimen was reported from nearby Cartagena in 2003. Herein, we report an adult fish caught near to deep-water reefs in the Golfo de Morrosquillo, Colombian Caribbean.

  10. 77 FR 61559 - Endangered and Threatened Wildlife; 90-Day Finding on a Petition To List Nassau Grouper as...

    Science.gov (United States)

    2012-10-10

    ... Randall, 1993; Foley et al., 2007). Nassau grouper are generally found near high-relief coral reefs and... population to coral reef area (rather than population size) to give an overall decline figure. This method... threatened destruction, modification, or curtailment of habitat or range; overutilization for commercial...

  11. 78 FR 31511 - Fisheries of the Caribbean, Gulf of Mexico, and South Atlantic; Snapper-Grouper Fishery Off the...

    Science.gov (United States)

    2013-05-24

    ... also applies in the South Atlantic on board a vessel for which a valid Federal commercial or charter... provide socio-economic benefits to snapper-grouper fishermen and communities that utilize the snapper... not distinguish charter vessels from headboats but an estimated 75 headboats are believed to possess...

  12. 75 FR 60009 - Fisheries of the Caribbean, Gulf of Mexico, and South Atlantic; Snapper-Grouper Fishery of the...

    Science.gov (United States)

    2010-09-29

    ..., Gulf of Mexico, and South Atlantic; Snapper-Grouper Fishery of the South Atlantic; Closure of the July- December 2010 Commercial Sector for Vermilion Snapper in the South Atlantic AGENCY: National Marine...: Temporary rule; closure. SUMMARY: NMFS closes the commercial sector for vermilion snapper in the...

  13. 77 FR 1908 - Fisheries of the Caribbean, Gulf of Mexico, and South Atlantic; Snapper-Grouper Fishery Off the...

    Science.gov (United States)

    2012-01-12

    ... Amendment (Comprehensive ACL Amendment) published on December 1, 2011 (76 FR 74757), and would implement an... Comprehensive ACL Amendment on December 30, 2011 (76 FR 82264) to implement the revised wreckfish ABC and ACL of..., Gulf of Mexico, and South Atlantic; Snapper-Grouper Fishery Off the Southern Atlantic States;...

  14. 75 FR 11068 - Fisheries of the Caribbean, Gulf of Mexico, and South Atlantic; Snapper-Grouper Fishery of the...

    Science.gov (United States)

    2010-03-10

    ..., Gulf of Mexico, and South Atlantic; Snapper-Grouper Fishery of the South Atlantic; Closure AGENCY.... ACTION: Temporary rule; closure. SUMMARY: NMFS closes the commercial fishery for vermilion snapper in the... snapper resource. DATES: This rule is effective 12:01 a.m., local time, March 19, 2010, through June...

  15. 78 FR 50394 - Fisheries of the Caribbean, Gulf of Mexico, and South Atlantic; Snapper-Grouper Fishery off the...

    Science.gov (United States)

    2013-08-19

    ... supplemental NOI to Amendment 22, published at 78 FR 46923, August 2, 2013, should be submitted on or before...Marie.Eich@noaa.gov . SUPPLEMENTARY INFORMATION: In FR Doc. 2013-18676, appearing on page 46924, in the..., and South Atlantic; Snapper-Grouper Fishery off the South Atlantic States; Amendment 22;...

  16. 78 FR 72867 - Fisheries of the Caribbean, Gulf of Mexico, and South Atlantic; Snapper-Grouper Fishery Off the...

    Science.gov (United States)

    2013-12-04

    ..., queen snapper, and silk snapper) beyond a depth of 240 ft (73 m) (75 FR 82280, December 30, 2010...) harvest prohibition on six deep-water snapper-grouper species (77 FR 27374, May 10, 2012) and concluded... prohibited (74 FR 1621, January 13, 2009). The intent of the eight MPAs is to protect long-lived, deep-...

  17. 78 FR 49183 - Fisheries of the Caribbean, Gulf of Mexico, and South Atlantic; Snapper-Grouper Fishery Off the...

    Science.gov (United States)

    2013-08-13

    ... 15 and requested public comments (78 FR 31511). The proposed rule and the regulatory amendment... small business size standards for several industries effective July 22, 2013 (78 FR 37398). The rule..., Gulf of Mexico, and South Atlantic; Snapper-Grouper Fishery Off the Southern Atlantic...

  18. 76 FR 68310 - Fisheries of the Caribbean, Gulf of Mexico, and South Atlantic; Snapper-Grouper Fishery Off the...

    Science.gov (United States)

    2011-11-04

    ...), and (b)(2); Sec. 622.8(a)(6); and Sec. 622.18(b)(1)(ii) published at 74 FR 58902 (November 16, 2009... CONTACT: Kate Michie, telephone: (727) 824- 5305. SUPPLEMENTARY INFORMATION: On November 16, 2009 (74 FR... the Caribbean, Gulf of Mexico, and South Atlantic; Snapper-Grouper Fishery Off the Southern...

  19. 76 FR 12605 - Fisheries of the Caribbean, Gulf of Mexico, and South Atlantic; Snapper-Grouper Fishery Off the...

    Science.gov (United States)

    2011-03-08

    ... On December 30, 2010, a final rule was published to implement Amendment 17B (75 FR 82280). That final..., Gulf of Mexico, and South Atlantic; Snapper-Grouper Fishery Off the Southern Atlantic States; Amendment... the final rule that implemented Amendment 17B to the Fishery Management Plan (FMP) for the...

  20. 76 FR 12883 - Fisheries of the Caribbean, Gulf of Mexico, and South Atlantic; Snapper-Grouper Fishery of the...

    Science.gov (United States)

    2011-03-09

    ..., Gulf of Mexico, and South Atlantic; Snapper-Grouper Fishery of the South Atlantic; Closure AGENCY.... ACTION: Temporary rule; closure. SUMMARY: NMFS closes the commercial sector for vermilion snapper in the... snapper resource. DATES: This rule is effective 12:01 a.m., local time, March 10, 2011, until 12:01...

  1. 77 FR 56563 - Snapper-Grouper Fishery of the South Atlantic; Reopening of the 2012 Commercial Sector for...

    Science.gov (United States)

    2012-09-13

    ..., 2012, and closed the commercial sector for yellowtail snapper on that date (77 FR 53776, September 4... (77 FR 15916). In part, the final rule for the Comprehensive ACL Amendment specified ACLs and AMs for... National Oceanic and Atmospheric Administration 50 CFR Part 622 RIN 0648-XC229 Snapper-Grouper Fishery...

  2. 76 FR 59063 - Fisheries of the Caribbean, Gulf of Mexico, and South Atlantic; Snapper-Grouper Fishery of the...

    Science.gov (United States)

    2011-09-23

    ..., 2011 (76 FR 34892). This trip limit, specified in 50 CFR 622.44(c)(6), remains in effect until the..., Gulf of Mexico, and South Atlantic; Snapper-Grouper Fishery of the South Atlantic; Closure AGENCY.... ACTION: Temporary rule; closure. SUMMARY: NMFS closes the commercial sector for vermilion snapper in...

  3. 77 FR 11775 - Fisheries of the Caribbean, Gulf of Mexico, and South Atlantic; Snapper-Grouper Fishery of the...

    Science.gov (United States)

    2012-02-28

    ..., Gulf of Mexico, and South Atlantic; Snapper-Grouper Fishery of the South Atlantic; Closure AGENCY.... ACTION: Temporary rule; closure. SUMMARY: NMFS closes the commercial sector for vermilion snapper in the... snapper resource. DATES: This rule is effective 12:01 a.m., local time, February 29, 2012, until 12:01...

  4. 76 FR 12883 - Fisheries of the Caribbean, Gulf of Mexico, and South Atlantic; Snapper-Grouper Fishery Off the...

    Science.gov (United States)

    2011-03-09

    ... From the Federal Register Online via the Government Publishing Office DEPARTMENT OF COMMERCE National Oceanic and Atmospheric Administration 50 CFR Part 622 RIN 0648-AY10 Fisheries of the Caribbean, Gulf of Mexico, and South Atlantic; Snapper-Grouper Fishery Off the Southern Atlantic States;...

  5. 77 FR 50672 - Fisheries of the Caribbean, Gulf of Mexico, and South Atlantic; Snapper-Grouper Fishery Off the...

    Science.gov (United States)

    2012-08-22

    ... 18A, implemented through final rulemaking on July 1, 2012, (77 FR 32408, June 1, 2012), included a... the establishment of an endorsement program. The proposed rule for Amendment 18A (77 FR 06991, March..., Gulf of Mexico, and South Atlantic; Snapper-Grouper Fishery Off the Southern Atlantic...

  6. 78 FR 61939 - Fisheries of the Caribbean, Gulf of Mexico, and South Atlantic; Snapper-Grouper Resources of the...

    Science.gov (United States)

    2013-10-07

    ... Office of the Federal Register, as implemented by the final rule for Regulatory Amendment 18 (78 FR 47574..., Gulf of Mexico, and South Atlantic; Snapper-Grouper Resources of the South Atlantic; Trip Limit... trip limit for vermilion snapper in or from the exclusive economic zone (EEZ) of the South Atlantic...

  7. 76 FR 23205 - Fisheries of the Caribbean, Gulf of Mexico, and South Atlantic; Snapper-Grouper Fishery of the...

    Science.gov (United States)

    2011-04-26

    ... FR 12883, March 9, 2011). However, based on current statistics, NMFS has determined that only 83..., Gulf of Mexico, and South Atlantic; Snapper-Grouper Fishery of the South Atlantic; Reopening of the Commercial Sector for Vermilion Snapper in the South Atlantic AGENCY: National Marine Fisheries Service...

  8. 75 FR 49447 - Fisheries of the Caribbean, Gulf of Mexico, and South Atlantic; Snapper-Grouper Fishery off the...

    Science.gov (United States)

    2010-08-13

    ... snapper, as well as other management measures that will help rebuild the stock. Management Measures... management decisions and would likely contribute to improved management of the stock. Rebuilding Plan The... to implement Amendment 17A to the Fishery Management Plan for the Snapper-Grouper Fishery of...

  9. Utilization of Potato Protein Recovered from Wastewater of Potato Starch Factory as Cattle Feed

    Directory of Open Access Journals (Sweden)

    Masayuki Takeguchi

    2015-05-01

    Full Text Available A large amount of wastewater is discharged from potato starch factories in Hokkaido, Japan. The wastewater contains residual potato constituents such as protein, which are named potato fruit juice (PFJ. A powerful stench is generated from PFJ by anaerobic fermentation. In this study, the isoelectric precipitation technique was applied to recover the potato protein from PFJ. Protein recovery from PFJ by acid isoelectric precipitation at pH 3.0 or less reached 80%. PFJ post-protein recovery at pH 3.0 does not produce a powerful stench. Potato protein recovered from PFJ by acid treatment is a useful feed resource. The PFJ in potato starch factory is a potentially promising resource for the production of potato protein. Wastewater from potato starch factories does not have to be waste or a source of powerful stench, it can be a valuable resource.

  10. Conditioning of broodstock of tiger grouper, Epinephelus fuscoguttatus, in a recirculating aquaculture system

    Directory of Open Access Journals (Sweden)

    Saleem Mustafa

    2015-11-01

    Full Text Available Closing the cycle of commercial species of fish in a recirculating aquaculture system is gaining importance for a number of practical advantages. Founder broodstock originating from the wild population is conditioned to live in hatchery tanks under suitable environmental and feeding conditions and is induced to breed. The juveniles are grown to maturity and facilitated to spawn in captivity to close the life cycle in the hatchery. This experiment was carried out on tiger grouper (Epinephelus fuscoguttatus. After preliminary observations, it was possible to identify appropriate environmental conditions in terms of water quality parameters, volume of broodstock tanks and ration. Growth was nearly isometric (growth exponent = 2.9185 and the condition factor = 1.86. This reflected good management conditions. Cues that trigger sex reversal in this protogynous fish in the hatchery were different from those that operate in nature. It appears that the differentiation of some individuals of a cohort into male sex is linked to socio-demographic cues as well as internal condition of the fish because it related to age and physiological condition. This view was reinforced by a lack of response in young fish to similar cues. The information generated through this study defines what is required for optimum conditioning of tiger grouper broodstock and explains the cues involved in sex differentiation.

  11. TEMPORAL VARIATION IN THE RED GROUPER, EPINEPHELUS MORIO, DEMOGRAPHIC STRUCTURE FROM SOUTHERN GULF OF MEXICO

    Directory of Open Access Journals (Sweden)

    Doralice Caballero-Arango

    2011-06-01

    Full Text Available Changes in the demographic structure of red grouper Epinephelus morio from the southern part of the Gulf of Mexico, were evaluated during periods when total catches, CPUE and annual yields of the specie decreased. Fishery-dependent samples (n = 1887 were obtained between August 1989 and February 2004 from the Campeche Bank, and size-frequency distributions by sex, sex ratios and sizes of sexual maturation and sex change were compared between three periods: P11989-1992 (n = 886; P21996-1998 (n = 413; and P32003-2004 (n = 588. The temporal stability of size-frequency distribution by sex, with males always being larger than females, and the sex ratios always biased towards females, were consistent with this species’ type of sexuality. Size for females and males, as well as sizes at first sexual maturity and at sex reversal all decreased from the oldest period to the more recent one and could be a consequence of the fishing intensity applied to this stock. The reductions in size of females and males associated with a relatively stable sex ratio and the lack of any drastic decrease in the number of males can be explained by this species’ reproductive ecology. Results are discussed regarding the capacity for reproductive resilience of red grouper in response to fishing pressure like that currently experienced by the Campeche Bank stock.

  12. Characterization of LPS-induced TNFα factor (LITAF) from orange-spotted grouper, Epinephelus coioides.

    Science.gov (United States)

    Cai, Jia; Huang, Youhua; Wei, Shina; Ouyang, Zhengliang; Huang, Xiaohong; Qin, Qiwei

    2013-12-01

    Lipopolysaccharide-induced TNFα factor (LITAF) is an important transcription factor that mediates cell apoptosis and inflammatory response. In the present study, we cloned and characterized a LITAF gene from orange-spotted grouper (Epinephelus coioides) (Ec-LITAF). Ec-LITAF encoded a predicted 142 amino acid protein which shared 74% identity to sablefish (Anoplopoma fimbria) LITAF homolog. Multiple amino acid alignment showed that Ec-LITAF contained a typical LITAF domain with two CXXC motifs. Phylogenetic analysis indicated that Ec-LITAF was closely related to that of sablefish. Ec-LITAF mRNA was widely expressed in different tissues and its expression level in spleen was up-regulated after Singapore grouper iridovirus (SGIV) infection. Subcellular localization analysis revealed that the distribution of Ec-LITAF showed diffuse and aggregated patterns in cytoplasm. Interestingly, the distribution of Ec-LITAF overlayed with a viral LITAF homolog (vLITAF) encoded by SGIV. Overexpression of Ec-LITAF in vitro up-regulated the expression of tumor necrosis factors (TNF1 and TNF2) and TNF receptors (TNFR1 and TNFR2), and the expression of itself initiated apoptosis in fish cells. In addition, overexpression of Ec-LITAF not only accelerated SGIV infection induced CPE and cell death, but also increased viral gene transcription. Taken together, our data suggested that Ec-LITAF might play crucial roles during SGIV replication.

  13. Molecular cloning and characterization of orange-spotted grouper (Epinephelus coioides) CXC chemokine ligand 12.

    Science.gov (United States)

    Wu, Chen-Shiou; Wang, Ting-Yu; Liu, Chin-Feng; Lin, Hao-Ping; Chen, Young-Mao; Chen, Tzong-Yueh

    2015-12-01

    Chemokines are a family of soluble peptides that can recruit a wide range of immune cells to sites of infection and disease. The CXCL12 is a chemokine that binds to its cognate receptor CXCR4 and thus involved in multiple physiological and pathophysiological processes. In this study, we cloned and characterized CXCL12 from Epinephelus coioides (osgCXCL12). We found that the open reading frame of osgCXCL12 consists of 98 amino acid residues with the small cytokine C-X-C domain located between residues 29 and 87. Higher expression levels for osgCXCL12 were detected at the kitting stage, compared with the prolarva and larva shape stages. The expression patterns revealed that osgCXCL12 may play a key role in early grouper development. We detected mRNA transcripts for osgCXCL12 in healthy tissues and found the highest osgCXCL12 expression in the head kidney. Furthermore, a time-course analysis revealed significantly increased osgCXCL12 and osgCXCR4 expression levels after the nervous necrosis virus (NNV) challenge. In addition, expression of osgCXCL12 was affected by injection with microbial mimics [LPS and poly(I:C)]. These results suggest that osgCXCL12 is associated with inflammatory and developmental processes in the grouper.

  14. Spawning aggregations of three protogynous groupers in the southern Gulf of Mexico.

    Science.gov (United States)

    Tuz-Sulub, A; Brulé, T

    2015-01-01

    Spawning aggregations of red hind Epinephelus guttatus, tiger grouper Mycteroperca tigris and yellowfin grouper Mycteroperca venenosa were identified at two coral-reef systems: Arrecife Alacranes (emergent bank reef) and Bajos del Norte (submerged bank reef) on the continental shelf of the Yucatan Peninsula (Campeche Bank), Mexico. At both reefs, E. guttatus forms large spawning aggregations between February and March. At Bajos del Norte, M. tigris reproduces in a small, low-density aggregation in May, while M. venenosa aggregates at high densities for spawning between March and May. Multi-species use of an aggregation site by E. guttatus and M. venenosa was observed at Bajos del Norte. The identified spawning aggregations are apparently stable in location over time, and all three species were commonly observed to spawn within 1 week following the full moon. Development and survival of the larvae spawned in these aggregations are probably aided by a seasonal (spring-summer) upwelling in the north-east Campeche Bank. A permanent area closure at Bajos del Norte, currently outside any specific fisheries management area or regulations, would provide protection needed for the spawning aggregations of these three species.

  15. Characterization of the VP39 envelope protein from Singapore grouper iridovirus.

    Science.gov (United States)

    Zhang, Honglian; Zhou, Sheng; Xia, Liqun; Huang, Xiaohong; Huang, Youhua; Cao, Jianhao; Qin, Qiwei

    2015-12-01

    Singapore grouper iridovirus (SGIV) is a major pathogen that causes heavy economic losses to the grouper aquaculture industry in China and Southeast Asian countries. In the present study, a viral envelope protein, VP39, encoded by SGIV ORF39L, was identified and characterized. SGIV ORF39L was found in all sequenced iridoviruses and is now considered to be a core gene of the family Iridoviridae. ORF39L was classified as a late gene during in vitro infection using reverse transcription-polymerase chain reaction, western blotting, and a drug inhibition analysis. An indirect immunofluorescence assay revealed that the VP39 protein was confined to the cytoplasm, especially at viral assembly sites. Western blot and matrix-assisted laser desorption/ionization-time of flight tandem mass spectrometry analyses suggested that VP39 is an envelope protein. Immunogold electron microscopy further confirmed that VP39 is a viral envelope protein. Furthermore, a mouse anti-VP39 polyclonal antibody exhibited SGIV-neutralizing activity in vitro, suggesting that VP39 is involved in SGIV infection. Taken together, the current data suggest that VP39 represents a conserved envelope protein of iridoviruses that contributes to viral infection.

  16. Efficacies of inactivated vaccines against betanodavirus in grouper larvae (Epinephelus coioides) by bath immunization.

    Science.gov (United States)

    Kai, Yu-Hsuan; Chi, Shau-Chi

    2008-03-10

    Betanodavirus is the pathogen of viral nervous necrosis (VNN) disease that has caused mass mortality among many species of marine fish at larval stage. In this study, the efficacy of inactivated betanodavirus was evaluated by bath-immunization and bath-challenge of orange-spotted grouper (Epinephelus coioides) at early larval stage. Two kinds of chemicals were used for inactivation of the virus, and the relative percent survival (RPS) values of 0.4mM binary ethylenimine (BEI)-inactivated vaccine was revealed to be 79-95, higher than that of 0.1-0.2% formalin-inactivated vaccines (39-43). Three lengths of bath immunization time were tested, and 20 min immersion of BEI-inactivated betanodavirus at a concentration of 10(6)TICD(50)/ml was sufficient to induce high protection (RPS > 75). Protection of the BEI-inactivated vaccine was evaluated at different time post immunization, and the peak of protection was observed 30 days post vaccination, and retained for at least 3 months. The efficacies of formalin-inactivated vaccines with or without encapsulation were compared, and the result revealed that the efficacy of formalin-inactivated vaccine could be significantly improved by nano-encapsulation (RPS = 85). All these data strongly suggested that bath immunization with nano-encapsulated formalin-inactivated or BEI-inactivated betanodavirus vaccines is an effective strategy to protect grouper larvae against VNN.

  17. Characterization and expression analysis of an allograft inflammatory factor-1 homologue in yellow grouper (Epinephelus awoara)

    Institute of Scientific and Technical Information of China (English)

    WANG Li; SHI Dawei; WU Xinzhong

    2008-01-01

    Allograft inflammatory factor-1 (AIF-1) is a cytoplasmic calcium-binding protein involved in iullammatory response-related dis-eases in mammals.Previously an identified AIF-1 gene was simply reported in yellow grouper.The characterization of AIF-1 gene and its expression at the gene and protein level are further described.Yellow grouper AIF-1 is composed of 147 amino acids,and 64% ~ 84% identical to other homologues.Basal level AIF-I mRNA expression was noted in spleen,anterior kid-ney and kidney,using reverse-transcription polymerase chain reaction (RT-PCR).After stimulation of LPS,the AIF-1 mRNA expression was up-regulated in tissues examined:spleen,anterior kidney,kidney,heart and liver,but not in muscle.The re-combinant AIF-1 protein was expressed in Escherichia coli,and then purified for the development of antiserum.Western blotting analysis revealed a band with a molecular mass of about 17 ku.

  18. In situ observation data from the grouper roi (Cephalopholis argus) removal project in West Hawaii from 2010-2011 (NODC Accession 0082197)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — In situ observations of the introduced predatory grouper roi (Cephalopholis argus) were taken within the coral reef ecosystem of Puako, northwest side of the Island...

  19. Molecular cloning and characterization of c-type lysozyme gene in orange-spotted grouper, Epinephelus coioides.

    Science.gov (United States)

    Wei, Shina; Huang, Youhua; Cai, Jia; Huang, Xiaohong; Fu, Jing; Qin, Qiwei

    2012-08-01

    Lysozymes are key proteins of the host innate immune system against pathogen infection. In this study, a c-type lysozyme gene (Ec-lysC) was cloned and characterized from orange-spotted grouper, Epinephelus coioides. The full-length Ec-lysC cDNA is composed of 533 bp and encodes a polypeptide of 144-residue protein with 94% identity to lysC of Kelp grouper, Epinephelus bruneus. The genomic DNA of Ec-lysC consists of 4 exons and 3 introns, with a total length of 1897 bp. Amino acid sequence alignment showed that Ec-lysC possessed conserved catalytic residues (Glu50 and Asp67) and "GSTDYGIFQINS" motif. RT-PCR results showed that Ec-lysC transcript was most abundant in head kidney and less in muscle. The expression of Ec-lysC was differentially up-regulated in head kidney after stimulation with lipopolysaccharide (LPS), Vibrio alginolyticus and Singapore grouper iridovirus (SGIV). Subcellular localization analysis revealed that Ec-lysC was distributed predominantly in the cytoplasm. The recombinant Ec-lysC (rEc-lysC) had lytic activities against Gram-positive bacteria Micrococcus lysodeikticus, Staphylococcus aureus, Streptococcus iniae and Gram-negative bacteria V. alginolyticus. The lysozyme acted on M. lysodeikticus cell walls as shown by scanning electron microscopy (SEM). Furthermore, overexpression of Ec-lysC in grouper cells delayed the occurrence of CPE induced by SGIV and inhibited the viral gene transcription significantly. Taken together, Ec-lysC might play an important role in grouper innate immune responses to invasion of bacterial and viral pathogens. C-type lysozyme gene from E. coioides (Ec-lysC) was identified and characterized.

  20. Mercury and histopathology of the vulnerable goliath grouper, Epinephelus itajara, in U.S. waters: a multi-tissue approach.

    Science.gov (United States)

    Adams, Douglas H; Sonne, Christian

    2013-10-01

    Goliath grouper have undergone significant global population declines with potential biological extinction for some subpopulations. Although overfishing and habitat loss are important drivers of these declines, the negative effects of contaminants may also play a role. The life history patterns of goliath grouper may make this species especially prone to exposure to contaminants and may exacerbate bioaccumulation of toxic substances, including mercury, which has documented detrimental health effects. Therefore, we analyzed mercury (in muscle, liver, kidney, gonad, and brain tissue) and the histology of key organs (liver, kidney and gill tissue) in 56 goliath groupers from U.S. waters. Total mercury concentration was greatest in liver tissue, followed by kidney, muscle, gonad, and brain. Maximum mercury concentration ranged from 22.68 μg/g in liver tissue to 0.89 μg/g in brain tissue. Mean mercury concentration ranged from 2.87 μg/g in liver tissue to 0.37 μg/g in brain tissue with a mean of 0.63 μg/g in muscle. Mean mercury concentrations observed in goliath grouper from U.S. waters were within the range known to cause direct health effects in fish after long-term exposure. The lesions and histological changes observed in the liver, kidney, and gills of goliath groupers were similar to those found in other fish following laboratory mercury-exposure trials and to those found in mercury-contaminated fish in wild populations carrying similar or even lower concentrations. We suggest that exposure to mercury and other environmental influences such as pathogens and reduced temperatures could be co-factors in the histological effects or anomalies observed in the present study, and resulting stresses may be involved in the observed population declines in the species.

  1. Antioxidant activity of potato juice

    Directory of Open Access Journals (Sweden)

    Przemysław Kowalczewski

    2012-06-01

    Full Text Available Background. The interest in potato juice as a therapeutic agent goes back to the 19th century but its application was not supported by any knowledge about biological activity of this raw material. Factors restricting the medical application of potato juice include its inattractive sensory and functional properties. The aim of the presented investigations was preliminary evaluation of the biological activity of potato juice and the impact on it of some technological operations such as: cryoconcentration and hydrolysis in a membrane reactor. Material and methods. Experiments comprised investigations of antioxidative potentials of fresh potato juice, products of its processing as well as fractions separated because of the size of their molecules using, for this purpose, Folin-Ciocalteu methods and reactions with the ABTS cation radical. Results. The value of the antioxidative potential of fresh potato juice determined by means of the ABTS reagent corresponded to approximately 330 μmol/100 g which is in keeping with literature data. As a result of the cryoconcentration process, the value determined by the Folin-Ciocalteu method was found to increase only slightly whereas the value determined by means of the ABTS reagent almost tripled. The antioxidative potential was found to grow even more strongly in the case of the application of both methods when the process of enzymatic hydrolysis was employed. The total of 5 protein fractions of molecular masses ranging from 11 000 Da to over 600 000 Da, as well as an organic non-protein fraction of the molecular mass of 600 Da, were obtained as a result of the performed separation. All the examined fractions exhibited antioxidative activities. The highest values determined by the Folin-Ciocalteu method were recorded for the protein fraction of 80 000 Da mean molecular mass, while using the ABTS reagent – for the organic, non-protein fraction. Conclusions. Potato juice possesses antioxidative activity which

  2. Mycobacterial infections in striped bass from Delaware Bay

    Science.gov (United States)

    Ottinger, C.A.; Brown, J.J.; Densmore, Christine L.; Starliper, C.E.; Blazer, V.S.; Weyers, H.S.; Beauchamp, K.A.; Rhodes, M.W.; Kator, H.; Gauthier, David T.; Vogelbein, W.K.

    2007-01-01

    Eighty striped bass Morone saxatilis were obtained from Delaware Bay using commercial gill nets set adjacent to Woodland Beach (n = 70) and Bowers Beach (n = 10) in December 2003. Fish were examined for gross lesions. Total lengths (TLs) and eviscerated weights were determined to calculate condition factors (K). Portions of spleens were aseptically harvested for bacterial culture, and portions of spleens, kidneys (anterior and posterior), livers, and gonads were obtained for histological examination. The size distribution of the striped bass was relatively homogeneous; the mean TL was about 600 mm for all samples. Mean K exceeded 0.95 in all samples and was not significantly different (P > 0.05) among samples. Significant differences in mycobacterial infection prevalence (P ??? 0.05) were observed among samples; samples obtained at Woodland Beach (WB) on December 10 (53.8%, n = 13) and December 17 (7.1%, n = 42) exhibited the most striking differences in prevalence. Mycobacterial infection intensity ranged from 1 ?? 102 to 1 ?? 107 colony-forming units per gram of spleen. Acanthocephalan infection prevalence and intensity, non-acid-fast bacterial infection prevalence, and fish sex ratio were also significantly different among the samples (P ??? 0.05). Similar to the mycobacterial infections, differences in sex ratio, acanthocephalan infection, and non-acid-fast bacterial infection were observed between the WB samples taken on December 10 and 17. However, no significant associations (P > 0.05) were observed between sex ratio or these infections and mycobacterial infection. The differences in bacterial and parasite infection prevalence and intensity and fish sex ratio in some samples indicate that these fish had a different history and that the epizootiology of mycobacterial infection in striped bass from Delaware Bay may be relatively complex. ?? Copyright by the American Fisheries Society 2007.

  3. Gonadotropins in European sea bass: Endocrine roles and biotechnological applications.

    Science.gov (United States)

    Mazón, María José; Molés, Gregorio; Rocha, Ana; Crespo, Berta; Lan-Chow-Wing, Olivier; Espigares, Felipe; Muñoz, Iciar; Felip, Alicia; Carrillo, Manuel; Zanuy, Silvia; Gómez, Ana

    2015-09-15

    Follicle stimulating hormone (Fsh) and luteinizing hormone (Lh) are central endocrine regulators of the gonadal function in vertebrates. They act through specific receptors located in certain cell types found in the gonads. In fish, the differential roles of these hormones are being progressively elucidated due to the development of suitable tools for their study. In European sea bass (Dicentrarchus labrax), isolation of the genes coding for the gonadotropin subunits and receptors allowed in first instance to conduct expression studies. Later, to overcome the limitation of using native hormones, recombinant dimeric gonadotropins, which show different functional characteristics depending on the cell system and DNA construct, were generated. In addition, single gonadotropin beta-subunits have been produced and used as antigens for antibody production. This approach has allowed the development of detection methods for native gonadotropins, with European sea bass being one of the few species where both gonadotropins can be detected in their native form. By administering recombinant gonadotropins to gonad tissues in vitro, we were able to study their effects on steroidogenesis and intracellular pathways. Their administration in vivo has also been tested for use in basic studies and as a biotechnological approach for hormone therapy and assisted reproduction strategies. In addition to the production of recombinant hormones, gene-based therapies using somatic gene transfer have been offered as an alternative. This approach has been tested in sea bass for gonadotropin delivery in vivo. The hormones produced by the genes injected were functional and have allowed studies on the action of gonadotropins in spermatogenesis. Copyright © 2015 Elsevier Inc. All rights reserved.

  4. Co-limitation of potato growth by Potato Cyst Nematode (Globodera rostochiensis) and Rhizoctonia solani

    NARCIS (Netherlands)

    Kiani, Z.; Zafari, D.; Rezaee, S.; Arjmandian, A.; Gitti, M.; Struik, P.C.

    2013-01-01

    Globodera rostochiensis and Rhizoctonia solani are the most important growth limiting factors influencing potato production in Iran. The effects of inoculation with Potato Cyst Nematodes (PCN) (0, 50, 75 and 100 cysts/3.5 kg soil) and R. solani (with or without inoculation) on potato growth and deve

  5. Dietary supplementation of Pediococcus pentosaceus enhances innate immunity, physiological health and resistance to Vibrio anguillarum in orange-spotted grouper (Epinephelus coioides).

    Science.gov (United States)

    Huang, Jian-Bin; Wu, Yu-Chi; Chi, Shau-Chi

    2014-08-01

    Groupers (Epinephelus spp.) are economically important fish species in Southeast Asian aquaculture. Vibriosis caused by Vibro spp. is one of the severe bacterial diseases that devastate the grouper aquaculture industry. Probiotics have been reported to show the potential to enhance fish immunity and to antagonize pathogens. In our previous study, a lactic acid bacterium Pediococcus pentosaceus strain 4012 (LAB4012), isolated from cobia intestine, protects cobia from photobacteriosis after a 2-week feeding. In this study, we examined the potential of LAB4012 to be a probiotic for the orange-spotted grouper through feeding, thus to guard against vibriosis. In vitro, LAB4012 culture supernatant with low pH suppressed the growth of Vibrio anguillarum, and lactic acid in the metabolite of LAB4012 appeared to be the major factor to the growth inhibition of V. anguillarum. In vivo, the challenge test showed that the cumulative mortality of the LAB4012-fed groupers was significantly lower than that of the control fish after V. anguillarum infection. Supplementation of LAB4012 in commercial diet not only enhanced the growth rate and erythrocyte numbers of the groupers, but also regulated the gene expression of the pro-/anti-inflammatory cytokines. One day post-infection of V. anguillarum, the leukocyte numbers in the peripheral blood and the phagocytic activity of the head-kidney phagocytes in the LAB4012-fed groupers were found significantly increased, when compared with those without LAB4012-feeding. These results suggested that LAB4012 can be a dietary probiotic for groupers in modulating the immunity and protecting the groupers from V. anguillarum infection.

  6. Four types of neoplasms in Asian sea bass (Lates calcarifer)

    Institute of Scientific and Technical Information of China (English)

    Ramalingam Vijayakumar; Kuzhanthaivel Raja; Vijayapoopathi Singaravel; Ayyaru Gopalakrishnan

    2015-01-01

    Objective:To describe and observe four types of neoplasms on different parts (external and internal organs) of an Asian sea bass (Lates calcarifer). Methods:The sample was collected from local fish landing center (south east coast of India). Histopathology of normal and tumour tissues were analyzed. Results:A total of 83 tumour masses (neoplasm) were recorded on the fish skin, also the neoplasms were recorded in internal organs of fish such as liver, stomach and ovary. Conclusions:Aetiology of such neoplasm’s are unknown, further more researches need to confirm the causative agent for this type of neoplasm.

  7. Terra e terror em Phase IV, de Saul Bass

    OpenAIRE

    2016-01-01

    Os anos 1970 foram palco de uma onda de filmes do gênero eco-horror, dos quais se destaca Phase IV (1974), único longa-metragem dirigido por Saul Bass. O filme é tomado no artigo como um experimento diante da interpelação de povos não-humanos, no caso, as formigas, à humanidade, representada pelo discurso científico. Tendo em vista a atual catástrofe ambiental, propõe-se que o cinema seja um lugar privilegiado para o desenvolvimento de um aparato mítico-real capaz de lidar com o fim do mundo ...

  8. Terra e terror em Phase IV, de Saul Bass

    Directory of Open Access Journals (Sweden)

    Juliana Fausto

    2016-07-01

    Full Text Available Os anos 1970 foram palco de uma onda de filmes do gênero eco-horror, dos quais se destaca Phase IV (1974, único longa-metragem dirigido por Saul Bass. O filme é tomado no artigo como um experimento diante da interpelação de povos não-humanos, no caso, as formigas, à humanidade, representada pelo discurso científico. Tendo em vista a atual catástrofe ambiental, propõe-se que o cinema seja um lugar privilegiado para o desenvolvimento de um aparato mítico-real capaz de lidar com o fim do mundo humano.

  9. Analyses of otoliths from juvenile black sea bass collected from estuaries in SC, FL, NJ, and NY: 2008-2009.

    Data.gov (United States)

    Baruch Institute for Marine and Coastal Sciences, Univ of South Carolina — Snappers/Groupers have traditionally been some of the most desired demersal fishes in the South Atlantic Bight and are the most abundant and diverse group of large...

  10. Molecular characterization of the GHRH/GHRH-R and its effect on GH synthesis and release in orange-spotted grouper (Epinephelus coioides).

    Science.gov (United States)

    Qian, Yuehua; Yan, Aifen; Lin, Haoran; Li, Wensheng

    2012-10-01

    Growth hormone-releasing hormone (GHRH) is a hypothalamic neuropeptide that stimulates growth hormone (GH) synthesis and secretion in the pituitary gland. In this paper, the full-length cDNAs of orange-spotted grouper GHRH and its receptor (GHRH-R) were cloned. The grouper GHRH cDNA is 713 bp in length and encodes a 141-aa precursor that includes an 18-aa signal peptide, a 27-aa mature GHRH mature peptide and a 47-aa carboxyl terminus. The grouper GHRH-R cDNA sequence is 1495 bp in length, encoding a 422-aa receptor with seven transmembrane domains. Tissue distribution analyses showed that both GHRH and GHRH-R mRNAs were predominantly expressed in the brain, while the GHRH-R mRNA was also abundantly detected in the pituitary gland. Both GHRH and GHRH-R mRNAs were expressed throughout embryonic development from the multi-cell stage to the newly hatched larvae stage, and the highest GHRH and GHRH-R expressions appeared at the brain vesicle stage and the heart stage, respectively. In vitro studies performed on the grouper pituitary primary cells showed that a synthetic grouper GHRH-NH(2) increased both GH mRNA expression and GH protein release in a dose-dependent manner. Together, these results suggest that the newly obtained grouper GHRH was able to stimulate GH synthesis and release, similar to its mammalian counterparts.

  11. Genetic Diversity and Differentiation of the Orange-Spotted Grouper (Epinephelus coioides Between and Within Cultured Stocks and Wild Populations Inferred from Microsatellite DNA Analysis

    Directory of Open Access Journals (Sweden)

    Haoran Lin

    2011-07-01

    Full Text Available In the present study, we employed microsatellite DNA markers to analyze the genetic diversity and differentiation between and within cultured stocks and wild populations of the orange-spotted grouper originating from the South China Sea and Southeast Asia. Compared to wild populations, genetic changes including reduced genetic diversity and significant differentiation have taken place in cultured grouper stocks, as shown by allele richness and heterozygosity studies, pairwise Fst, structure, molecular variance analysis, as well as multidimensional scaling analysis. Although two geographically adjacent orange-spotted grouper populations in China showed negligible genetic divergence, significant population differentiation was observed in wild grouper populations distributed in a wide geographical area from China, through Malaysia to Indonesia. However, the Mantel test rejected the isolation-by-distance model of genetic structure, which indicated the genetic differentiation among the populations could result from the co-effects of various factors, such as historical dispersal, local environment, ocean currents, river flows and island blocks. Our results demonstrated that microsatellite markers could be suitable not only for genetic monitoring cultured stocks but also for revealing the population structuring of wild orange-spotted grouper populations. Meanwhile, our study provided important information for breeding programs, management of cultured stocks and conservation of wild populations of the orange-spotted grouper.

  12. Testing the thermal-niche oxygen-squeeze hypothesis for estuarine striped bass

    Science.gov (United States)

    Kraus, Richard T.; Secor, D.H.; Wingate, Rebecca L.

    2015-01-01

    In many stratified coastal ecosystems, conceptual and bioenergetics models predict seasonal reduction in quality and quantity of fish habitat due to high temperatures and hypoxia. We tested these predictions using acoustic telemetry of 2 to 4 kg striped bass (Morone saxatilis Walbaum) and high-resolution spatial water quality sampling in the Patuxent River, a sub-estuary of the Chesapeake Bay, during 2008 and 2009. Striped bass avoided hypoxic (dissolved oxygen ≤2 mg·l−1) subpycnocline waters, but frequently occupied habitats with high temperatures (>25 °C) in the summer months, as cooler habitats were typically not available. Using traditional concepts of the seasonal thermal-niche oxygen-squeeze, most of the Patuxent estuary would beconsidered unsuitable habitat for adult striped bass during summer. Application of a bioenergetics model revealed that habitats selected by striped bass during summer would support positive growth rates assuming fish could feed at one-half ofmaximum consumption. Occupancy of the estuary during summer by striped bass in this study was likely facilitated by sufficient prey and innate tolerance of high temperatures by sub-adult fish of the size range that we tagged. Our results help extend the thermalniche oxygen-squeeze hypothesis to native populations of striped bass in semi-enclosed coastal systems. Tolerance of for supraoptimal temperatures in our study supports recent suggestions by others that the thermal-niche concept for striped bass should be revised to include warmer temperatures.

  13. The role of potatoes and potato components in cardiometabolic health: a review.

    Science.gov (United States)

    McGill, Carla R; Kurilich, Anne C; Davignon, Jean

    2013-11-01

    Potatoes (Solanum tuberosum) are an important food crop worldwide and contribute key nutrients to the diet, including vitamin C, potassium, and dietary fiber. Potatoes and potato components have been shown to have favorable impacts on several measures of cardiometabolic health in animals and humans, including lowering blood pressure, improving lipid profiles, and decreasing markers of inflammation. A range of glycemic index (GI) values have been reported for potatoes, and data are sparse regarding the impact of potato consumption on the postprandial glycemic response, especially when potatoes are consumed with other foods. There is a lack of clinical trial data regarding the impact of potatoes on weight management. A small number of human cohort studies have reported beneficial associations between potato consumption as part of a healthy lifestyle and cardiometabolic health. Another small number of human population studies have included potatoes as part of a dietary pattern with other calorie-dense foods and have not reported cardiometabolic benefits. The epidemiological literature should be interpreted with caution due to lack of consistency in both defining dietary patterns that include potatoes and in control for potential confounding variables. Controlled clinical trials are needed to define the impact of potatoes on cardiometabolic health.

  14. Dietary administration of sodium alginate ameliorated stress and promoted immune resistance of grouper Epinephelus coioides under cold stress.

    Science.gov (United States)

    Lee, Pai-Po; Lin, Yu-Hung; Chen, Min-Chieh; Cheng, Winton

    2017-06-01

    Grouper, Epinephelus coioides, fed a diet containing sodium alginate at 0 (control, named C) and 1.0 g kg(-1) (named S) at a temperature of 28 °C for 12 days, were then further individually transferred to 28 (two groups named C-28 and S-28) or 20 °C (two groups named C-20 and S-20), and immune parameters and stress indexes were measured at the beginning and after 6, 12, 24 and 48 h of exposure. Examination of immune parameters revealed that the alternative complement activity (ACH50), lysozyme activity, phagocytic activity, superoxide dismutase, and respiratory bursts significantly increased in groupers fed the sodium alginate-containing diet for 12 days, and were higher in the S-28 than those of the C-28 and S-20 groups, which were higher than those of the C-20 group from 6 to 48 h except for ACH50 at 48 h, respiratory bursts at 48 h, and lysozymes at 6 h. For the assessment of stress indicators, cortisol, glucose, and lactate levels of serum significantly decreased in grouper fed the sodium alginate-containing diet for 12 days, and were higher in the C-20 group than those of the C-28 and S-20 groups, which were higher than those of the S-20 group at 6-48 h. In another experiment, grouper fed the test diet for 12 days at a temperature of 28 °C were challenged with Photobacterium damselae subsp. piscicida at a dose of 5 × 10(3) colony-forming units (cfu) (g fish)(-1), and then individually transferred to 28 or 20 °C. The survival rate of challenged fish of the C-28 group was significantly lower than those of challenged fish of the C-20 and S-28 groups, which were significantly lower than that of challenged fish of the S-20 group. All challenged fish of the S-20 group survived. Survival rates over 144 h were 30.0%, 70.0%, and 56.7% for the C-28, C-20, and S-28 groups, respectively. Our results indicated that dietary sodium alginate administration downregulated stress response indicators, enhanced immune responses, and prevented impacts of

  15. Striped Bass Spawning in Non-Estuarine Portions of the Savannah River

    Energy Technology Data Exchange (ETDEWEB)

    Martin, D.; Paller, M.

    2007-04-17

    Historically, the estuarine portions of the Savannah River have been considered to be the only portion of the river in which significant amounts of striped bass (Morone saxatilis) spawning normally occur. A reexamination of data from 1983 through 1985 shows a region between River Kilometers 144 and 253 where significant numbers of striped bass eggs and larvae occur with estimated total egg production near that currently produced in the estuarine reaches. It appears possible that there are two separate spawning populations of striped bass in the Savannah River.

  16. Dormancy and growth vigour of seed potatoes.

    NARCIS (Netherlands)

    Ittersum, van M.K.

    1992-01-01

    Dormancy is an important property of seed potatoes. Seed tubers planted too soon after their harvest do not produce plants because of dormancy, or produce low yields because of poor growth vigour. Potato tubers from the same cultivar vary in their duration of dormancy. The first aim of the research

  17. Potato operation: computer vision for agricultural robotics

    Science.gov (United States)

    Pun, Thierry; Lefebvre, Marc; Gil, Sylvia; Brunet, Denis; Dessimoz, Jean-Daniel; Guegerli, Paul

    1992-03-01

    Each year at harvest time millions of seed potatoes are checked for the presence of viruses by means of an Elisa test. The Potato Operation aims at automatizing the potato manipulation and pulp sampling procedure, starting from bunches of harvested potatoes and ending with the deposit of potato pulp into Elisa containers. Automatizing these manipulations addresses several issues, linking robotic and computer vision. The paper reports on the current status of this project. It first summarizes the robotic aspects, which consist of locating a potato in a bunch, grasping it, positioning it into the camera field of view, pumping the pulp sample and depositing it into a container. The computer vision aspects are then detailed. They concern locating particular potatoes in a bunch and finding the position of the best germ where the drill has to sample the pulp. The emphasis is put on the germ location problem. A general overview of the approach is given, which combines the processing of both frontal and silhouette views of the potato, together with movements of the robot arm (active vision). Frontal and silhouette analysis algorithms are then presented. Results are shown that confirm the feasibility of the approach.

  18. Sustainable potato production: guidelines for developing countries

    NARCIS (Netherlands)

    Lutaladio, N.; Ortiz, O.; Haverkort, A.J.; Caldiz, D.O.

    2009-01-01

    During the International Year of the Potato, celebrated in 2008, FAO and CIP helped forge partnerships worldwide to address critical aspects of sustainable potato production. This technical guide collates that experience to review technical, socio-economic, policy and institutional factors that

  19. Nitrogen responses and nitrogen management in potato

    NARCIS (Netherlands)

    Vos, J.

    2009-01-01

    Innumerable experiments have been carried out to establish the yield response of potato to the rate of nitrogen (N) supply. Given the continuing change in production level of potato and because of the need to maximise the nutrient use efficiency and to reduce losses of harmful nitrogenous compounds

  20. Potato cyst nematodes: pests of national importance

    Science.gov (United States)

    Potato cyst nematodes (PCN; G. rostochiensis and G. pallida) are internationally-recognized quarantine pests and considered the most devastating pests of potatoes due to annual worldwide yield losses estimated at 12.2%. PCNs continue to spread throughout North America and were recently detected in I...

  1. Ensuring the genetic diversity of potatoes

    Science.gov (United States)

    Opportunities for advances in the potato crop through genetics are great, since potato has many needs for improvement, and many related species with the traits required are available. Genebanks provide a centralized and specialized resource for providing the services of acquisition, classification, ...

  2. Dormancy and growth vigour of seed potatoes

    NARCIS (Netherlands)

    Ittersum, van M.K.

    1992-01-01

    Dormancy is an important property of seed potatoes. Seed tubers planted too soon after their harvest do not produce plants because of dormancy, or produce low yields because of poor growth vigour. Potato tubers from the same cultivar vary in their duration of dormancy. The first aim of the

  3. The Rheological Property of Potato Starch Adhesives

    Directory of Open Access Journals (Sweden)

    Junjun Liu

    2014-02-01

    Full Text Available The main goal of this study was to use potato starch in the production of environmentally sound adhesives. ‘Three-formaldehyde glue’ pollutes the environment and harms to human health strongly, which widely used for wood-based panels preparation. Environment-friendly potato starch adhesives were prepared using method of oxidation-gelatinization, insteading of the three formaldehyde glue. The effects of the quality ratio of starch and water, temperature and shear rate on the apparent viscosity of the adhesive were studied. The rheological eigenvalue of apparent viscosity was studied through nonlinear regression. The results showed that the apparent viscosity of potato starch adhesives decreased with the increasing of temperature; the apparent viscosity decreased slowly with the increasing of rotor speed; the phenomenon of shear thinning appeared within potato starch adhesives which was pseudo-plastic fluids. Potato starch adhesives with characteristics of non-toxic, no smell and pollution could be applied in interior and upscale packaging.

  4. DISEASE RESISTANCE AND HUMORAL IMMUNOMODULATORY EFFECTS OF VITAMIN C ON GROUPER, EPINEPHELUS AWOARA

    Institute of Scientific and Technical Information of China (English)

    2000-01-01

    The disease resistance and humoral immunomodulatory effects of vitamin C administered orally to grouper, Epinephelus awoara maintained on a frozen fish diet supplemented with vitamin C at 500, 1000, 1500 and 2000 mg/kg were investigated. After 20 weeks, the growth rates of the groups with high level of vitamin C apparently increased. The untreated fish had symptoms of vitamin C deficiency. The endogenous liver tissue vitamin C levels were found to reflect well the dietary treatments. After intraperitoneal injection or bath challenge with a virulent strain of Vibrio vulnificus, fish fed with high level vitamin C showed significantly higher survival rate compared with the normal control group. Vaccination with formalin inactivated V. vulnificus significantly enhanced the specific antibody production in fish treated with vitamin C, and completely protected from strong bacterial challenge the groups fed on fish with vitamin C 1500 and 2000 mg/kg diet.

  5. 7 CFR 948.151 - Colorado Potato Committee membership.

    Science.gov (United States)

    2010-01-01

    ... 7 Agriculture 8 2010-01-01 2010-01-01 false Colorado Potato Committee membership. 948.151 Section... POTATOES GROWN IN COLORADO Rules and Regulations Modification of Inspection Requirements § 948.151 Colorado Potato Committee membership. The Colorado Potato Committee shall be comprised of six members...

  6. 7 CFR 945.7 - Certified seed potatoes.

    Science.gov (United States)

    2010-01-01

    ... 7 Agriculture 8 2010-01-01 2010-01-01 false Certified seed potatoes. 945.7 Section 945.7... Certified seed potatoes. Certified seed potatoes means and includes all potatoes officially certified and tagged, marked, or otherwise appropriately identified, under the supervision of the official seed...

  7. Acrylamide mitigation in potato chips by using NaCl

    DEFF Research Database (Denmark)

    Pedreschi, Franco; Risum, Jørgen; Granby, Kit

    2009-01-01

    potato chips and French fries, at levels of 30-2300 ppb. The objective of this research was to study the effect of immersing potato slices in a NaCI solution in relation to acrylamide formation in the prepared potato chips. Potato slices (Verdi variety, diameter: 40 mm, width: 2.0 mm) were fried at 170...

  8. Characterization of cathepsin B gene from orange-spotted grouper, Epinephelus coioides involved in SGIV infection.

    Science.gov (United States)

    Wei, Shina; Huang, Youhua; Huang, Xiaohong; Cai, Jia; Yan, Yang; Guo, Chuanyu; Qin, Qiwei

    2014-01-01

    The lysosomal cysteine protease cathepsin B of papain family is a key regulator and signaling molecule that involves in various biological processes, such as the regulation of apoptosis and activation of virus. In the present study, cathepsin B gene (Ec-CB) was cloned and characterized from orange-spotted grouper, Epinephelus coioides. The full-length Ec-CB cDNA was composed of 1918 bp and encoded a polypeptide of 330 amino acids with higher identities to cathepsin B of teleosts and mammalians. Ec-CB possessed typical cathepsin B structural features including an N-terminal signal peptide, the propeptide region and the cysteine protease domain which were conserved in other cathepsin B sequences. Phylogenetic analysis revealed that Ec-CB was most closely related to Lutjanus argentimaculatus. RT-PCR analysis showed that Ec-CB transcript was expressed in all the examined tissues which abundant in spleen, kidney and gill. After challenged with Singapore grouper iridovirus (SGIV) stimulation, the mRNA expression of cathepsin B in E. coioides was up-regulated at 24 h post-infection. Subcellular localization analysis revealed that Ec-CB was distributed predominantly in the cytoplasm. When the fish cells (GS or FHM) were treated with the cathepsin B specific inhibitor CA-074Me, the occurrence of CPE induced by SGIV was delayed, and the viral gene transcription was significantly inhibited. Additionally, SGIV-induced typical apoptosis was also inhibited by CA-074Me in FHM cells. Taken together, our results demonstrated that the Ec-CB might play a functional role in SGIV infection.

  9. Identification and characterization of Rab7 from orange-spotted grouper, Epinephelus coioides.

    Science.gov (United States)

    Fu, Jing; Huang, Youhua; Cai, Jia; Wei, Shina; Ouyang, Zhengliang; Ye, Fuzhou; Huang, Xiaohong; Qin, Qiwei

    2014-01-01

    Rab7 is a small GTPase that regulates vesicular traffic from early to late endosomal stages of the endocytic pathway. During the virus-host co-evolution, host Rab7 was also exploited by virus to complete their life cycle. To date, however, the roles of fish Rab7 in virus infection remained largely unknown. Here, we cloned and characterized a Rab7 gene from grouper, Epinephelus coioides (Ec-Rab7). The full-length Ec-Rab7 cDNA was composed of 1182 bp and encoded a polypeptide of 207 amino acids which shared 99% identity with that from Anoplopoma fimbria or Oreochromis niloticus. Ec-Rab7 contained five conserved domains of Rab GTPase family including GTP-binding or GTPase regions as well as an effector site. RT-PCR analysis revealed that Ec-Rab7 ubiquitously expressed in all detected tissues and its transcript in spleen was up-regulated after challenge with Singapore grouper iridovirus (SGIV). Subcellular localization analysis revealed that Ec-Rab7 was distributed in the cytoplasm as spots and mostly colocalized with lysosomes. Notably, the ectopic expressed Ec-Rab7 partly aggregated into the viral factories in cells infected by SGIV. Furthermore, overexpression of Ec-Rab7 accelerated the occurrence of cytopathic effect (CPE) induced by SGIV infection and promoted viral gene transcription. In addition, far western blotting assay revealed that Ec-Rab7 might interact with viral proteins, including SGIV VP69 and VP101. Taken together, our data suggested that Ec-Rab7 might be potentially involved in SGIV replication.

  10. A phylogenetic re-analysis of groupers with applications for ciguatera fish poisoning.

    Directory of Open Access Journals (Sweden)

    Charlotte Schoelinck

    Full Text Available Ciguatera fish poisoning (CFP is a significant public health problem due to dinoflagellates. It is responsible for one of the highest reported incidence of seafood-borne illness and Groupers are commonly reported as a source of CFP due to their position in the food chain. With the role of recent climate change on harmful algal blooms, CFP cases might become more frequent and more geographically widespread. Since there is no appropriate treatment for CFP, the most efficient solution is to regulate fish consumption. Such a strategy can only work if the fish sold are correctly identified, and it has been repeatedly shown that misidentifications and species substitutions occur in fish markets.We provide here both a DNA-barcoding reference for groupers, and a new phylogenetic reconstruction based on five genes and a comprehensive taxonomical sampling. We analyse the correlation between geographic range of species and their susceptibility to ciguatera accumulation, and the co-occurrence of ciguatoxins in closely related species, using both character mapping and statistical methods.Misidentifications were encountered in public databases, precluding accurate species identifications. Epinephelinae now includes only twelve genera (vs. 15 previously. Comparisons with the ciguatera incidences show that in some genera most species are ciguateric, but statistical tests display only a moderate correlation with the phylogeny. Atlantic species were rarely contaminated, with ciguatera occurrences being restricted to the South Pacific.The recent changes in classification based on the reanalyses of the relationships within Epinephelidae have an impact on the interpretation of the ciguatera distribution in the genera. In this context and to improve the monitoring of fish trade and safety, we need to obtain extensive data on contamination at the species level. Accurate species identifications through DNA barcoding are thus an essential tool in controlling CFP since

  11. Immunomodulatory effect of sodium alginate enriched diet in kelp grouper Epinephelus brneus against Streptococcus iniae.

    Science.gov (United States)

    Harikrishnan, Ramasamy; Kim, Man-Chul; Kim, Ju-Sang; Han, Yong-Jae; Jang, Ik-Soo; Balasundaram, Chellam; Heo, Moon-Soo

    2011-02-01

    The effect of diets containing sodium alginate at 0, 0.5, 1.0, and 2.0 g kg⁻¹ following challenge with Streptococcus iniae in kelp grouper Epinephelus bruneus were assessed with reference to survival rate and innate immune parameters such as alternative complement, lysozyme, natural haemagglutination, respiratory burst, superoxide dismutase, and phagocytic activities on week 1, 2, and 4. Fish fed with sodium alginate containing diet at 1.0 and 2.0 g kg⁻¹ after being challenged with S. iniae had higher survival rates of 75% and 60%, respectively than those fed with control diet (0 g kg⁻¹). With any enriched diet the percentage of macrophages significantly decreased from week 1-4, while the percentage of neutrophils and lymphocytes significantly increased. The alternate complement activity, natural haemagglutination, and phagocytic activities of infected fish fed with sodium alginate containing diet at 1.0 g kg⁻¹ on week 2 and 1.0 and 2.0 g kg⁻¹ diets on week 4 were significantly higher when compared to the control. The lysozyme, respiratory bursts, and superoxide dismutase activities of fish fed with enriched diets at 1.0 and 2.0 g kg⁻¹ were significantly increased on week 2 and 4. We therefore recommend that at 1.0 or 2.0 g kg⁻¹ dietary administration of sodium alginate can enhance innate immunity and disease resistance in kelp grouper against S. iniae. Copyright © 2010 Elsevier Ltd. All rights reserved.

  12. Behavior, color change and time for sexual inversion in the protogynous grouper (Epinephelus adscensionis.

    Directory of Open Access Journals (Sweden)

    Richard J Kline

    Full Text Available Hermaphroditism, associated with territoriality and dominance behavior, is common in the marine environment. While male sex-specific coloration patterns have been documented in groupers, particularly during the spawning season, few data regarding social structure and the context for these color displays are available. In the present study, we define the social structure and male typical behavior of rock hind (Epinephelus adscensionis in the wild. In addition, we detail the captive conditions and time period necessary to induce the onset of the sex-specific coloration and sexual change. At six oil production platform locations in the Gulf of Mexico, rock hind social group size and typical male rock hind social behavior were documented. We observed a rapid temporary color display in rock hind that could be turned on and off within three seconds and was used for confronting territory intruders and displays of aggression towards females. The male-specific "tuxedo" pattern consists of a bright yellow tail, a body with alternating dark brown and white patches and a dark bar extending from the upper mandible to the operculum. Identification and size ranges of male, female and intersex fish collected from oil platforms were determined in conjunction with gonadal histology. Rock hind social order is haremic with one dominant male defending a territory and a linear dominance hierarchy among individuals. In five captive experiments, the largest remaining female rock hind displayed the male specific color pattern within 32d after dominant male removal from the social group. To our knowledge, this is the first evidence in a grouper species of color patterning used to display territoriality and dominance outside of spawning aggregations. The behavioral paradigm described here is a key advance that will enable mechanistic studies of this complex sex change process.

  13. Behavior, color change and time for sexual inversion in the protogynous grouper (Epinephelus adscensionis).

    Science.gov (United States)

    Kline, Richard J; Khan, Izhar A; Holt, G Joan

    2011-01-01

    Hermaphroditism, associated with territoriality and dominance behavior, is common in the marine environment. While male sex-specific coloration patterns have been documented in groupers, particularly during the spawning season, few data regarding social structure and the context for these color displays are available. In the present study, we define the social structure and male typical behavior of rock hind (Epinephelus adscensionis) in the wild. In addition, we detail the captive conditions and time period necessary to induce the onset of the sex-specific coloration and sexual change. At six oil production platform locations in the Gulf of Mexico, rock hind social group size and typical male rock hind social behavior were documented. We observed a rapid temporary color display in rock hind that could be turned on and off within three seconds and was used for confronting territory intruders and displays of aggression towards females. The male-specific "tuxedo" pattern consists of a bright yellow tail, a body with alternating dark brown and white patches and a dark bar extending from the upper mandible to the operculum. Identification and size ranges of male, female and intersex fish collected from oil platforms were determined in conjunction with gonadal histology. Rock hind social order is haremic with one dominant male defending a territory and a linear dominance hierarchy among individuals. In five captive experiments, the largest remaining female rock hind displayed the male specific color pattern within 32d after dominant male removal from the social group. To our knowledge, this is the first evidence in a grouper species of color patterning used to display territoriality and dominance outside of spawning aggregations. The behavioral paradigm described here is a key advance that will enable mechanistic studies of this complex sex change process.

  14. Local ecological knowledge on the goliath grouper epinephelus itajara (teleostei: serranidae in southern Brazil

    Directory of Open Access Journals (Sweden)

    Leopoldo Cavaleri Gerhardinger

    Full Text Available The goliath grouper Epinephelus itajara is a large sized (> 400 kg and critically endangered marine fish, which is protected in many countries, including Brazil. Through the application of semi-structured interviews, we investigated the local ecological knowledge of seven fishermen specialist on catching E. itajara from the Babitonga bay, Santa Catarina, Brazil. Local long-line fisheries for E. itajara seemed to be a disappearing tradition in the studied site, with a detailed inherent local ecological knowledge system, which is also being lost. Our study also showed that fishermen engaged in recent fisheries, such as spear-fishing, can also possess a detailed local ecological knowledge system. Through the analysis of fishermen local ecological knowledge, several aspects of E. itajara life history were registered. This species is found in the inner and outer Babitonga bay, from saline waters to areas with a large input of freshwater, and inhabits submerged wooden substrates and artificial reefs such as shipwrecks, mooring pillars and cargo containers. It is known to spawn in December and subsequent summer months in the studied area. Spawning aggregations are usually seen in December (during full moon, being also eventually observed in January and February by our informants. While lobsters, spadefishes and octopuses seem to constitute the most important food items of inner bay E. itajara, outer bay individuals may feed on catfishes, crustaceans and other fish species. The goliath grouper is regarded as pacific and curious fish, but frequently display agonistic behavior in the presence of divers. Based on the perception of well experienced spear fishermen, we hypothesize that E. itajara undertakes seasonal migrations from the inner to the outer bay during summer, and that the studied population is suffering from growth over-fishing. Our data provides a practical evidence of how joining scientific and local ecological knowledge will likely benefit E

  15. Behavior, Color Change and Time for Sexual Inversion in the Protogynous Grouper (Epinephelus adscensionis)

    Science.gov (United States)

    Kline, Richard J.; Khan, Izhar A.; Holt, G. Joan

    2011-01-01

    Hermaphroditism, associated with territoriality and dominance behavior, is common in the marine environment. While male sex-specific coloration patterns have been documented in groupers, particularly during the spawning season, few data regarding social structure and the context for these color displays are available. In the present study, we define the social structure and male typical behavior of rock hind (Epinephelus adscensionis) in the wild. In addition, we detail the captive conditions and time period necessary to induce the onset of the sex-specific coloration and sexual change. At six oil production platform locations in the Gulf of Mexico, rock hind social group size and typical male rock hind social behavior were documented. We observed a rapid temporary color display in rock hind that could be turned on and off within three seconds and was used for confronting territory intruders and displays of aggression towards females. The male-specific “tuxedo” pattern consists of a bright yellow tail, a body with alternating dark brown and white patches and a dark bar extending from the upper mandible to the operculum. Identification and size ranges of male, female and intersex fish collected from oil platforms were determined in conjunction with gonadal histology. Rock hind social order is haremic with one dominant male defending a territory and a linear dominance hierarchy among individuals. In five captive experiments, the largest remaining female rock hind displayed the male specific color pattern within 32d after dominant male removal from the social group. To our knowledge, this is the first evidence in a grouper species of color patterning used to display territoriality and dominance outside of spawning aggregations. The behavioral paradigm described here is a key advance that will enable mechanistic studies of this complex sex change process. PMID:21647429

  16. Storage performance of Taiwanese sweet potato cultivars.

    Science.gov (United States)

    Huang, Che-Lun; Liao, Wayne C; Chan, Chin-Feng; Lai, Yung-Chang

    2014-12-01

    Three sweet potato cultivars (TNG57, TNG66, and TNG73), provided by the Taiwanese Agricultural Research Institute (TARI), were stored at either 15 °C or under ambient conditions (23.8 ~ 28.4 °C and 77.1 ~ 81.0 % of relative humidity). Sweet potato roots were randomly chosen from each replicate and evaluated for measurement of weight loss, sugar content analysis, and sprouting after 0, 14, 24, 48, 56, 70, 84, and 98 days of storage. Fresh sweet potato roots were baked at 200 °C for 60 min then samples were taken for sugar analysis. After 14 days of ambient condition storage, the sprouting percentages for TNG57, TNG66, and TNG73 were 100, 85, and 95 % respectively. When sweet potatoes were stored at 15 °C, the weight loss became less and no sweet potato root sprouted after 14 days of storage. Because manufacturers can store sweet potatoes at 15 °C for almost 2 month without other treatments, the supply capacity shortage in July and September can be reduced. The total sugar content slowly increased along with increasing the storage time. After baking, the total sugar content of sweet potatoes significantly increased due to the formation of maltose. Maltose became the major sugar of baked sweet potatoes. Raw sweet potatoes stored at 15 °C had higher total sugar contents after baking than those stored under ambient conditions. Raw sweet potatoes were recommended to be stored at 15 °C before baking.

  17. Striped Bass, morone saxatilis, egg incubation in large volume jars

    Science.gov (United States)

    Harper, C.J.; Wrege, B.M.; Jeffery, Isely J.

    2010-01-01

    The standard McDonald jar was compared with a large volume jar for striped bass, Morone saxatilis, egg incubation. The McDonald jar measured 16 cm in diameter by 45 cm in height and had a volume of 6 L. The experimental jar measured 0.4 m in diameter by 1.3 m in height and had a volume of 200 L. The hypothesis is that there is no difference in percent survival of fry hatched in experimental jars compared with McDonald jars. Striped bass brood fish were collected from the Coosa River and spawned using the dry spawn method of fertilization. Four McDonald jars were stocked with approximately 150 g of eggs each. Post-hatch survival was estimated at 48, 96, and 144 h. Stocking rates resulted in an average egg loading rate (??1 SE) in McDonald jars of 21.9 ?? 0.03 eggs/mL and in experimental jars of 10.9 ?? 0.57 eggs/mL. The major finding of this study was that average fry survival was 37.3 ?? 4.49% for McDonald jars and 34.2 ?? 3.80% for experimental jars. Although survival in experimental jars was slightly less than in McDonald jars, the effect of container volume on survival to 48 h (F = 6.57; df = 1,5; P > 0.05), 96 h (F = 0.02; df = 1, 4; P > 0.89), and 144 h (F = 3.50; df = 1, 4; P > 0.13) was not statistically significant. Mean survival between replicates ranged from 14.7 to 60.1% in McDonald jars and from 10.1 to 54.4% in experimental jars. No effect of initial stocking rate on survival (t = 0.06; df = 10; P > 0.95) was detected. Experimental jars allowed for incubation of a greater number of eggs in less than half the floor space of McDonald jars. As hatchery production is often limited by space or water supply, experimental jars offer an alternative to extending spawning activities, thereby reducing labor and operations cost. As survival was similar to McDonald jars, the experimental jar is suitable for striped bass egg incubation. ?? Copyright by the World Aquaculture Society 2010.

  18. Characterization and functional analysis of voltage-dependent anion channel 1 (VDAC1) from orange-spotted grouper (Epinephelus coioides).

    Science.gov (United States)

    Shi, Yan; Zhao, Zhe; Hong, Xiaoyou; Chen, Kunci; Zhu, Xinping

    2014-07-01

    The voltage-dependent anion channel (VDAC) is a highly conserved integral protein of mitochondria in different eukaryotic species. It forms a selective channel in the mitochondrial outer membrane that serves as the controlled pathway for small metabolites and ions. In this study, a VDAC gene, EcVDAC1, was isolated from orange-spotted grouper (Epinephelus coioides). The EcVDAC1 exhibits ubiquitous expression in various tissues of orange-spotted grouper and is upregulated in liver, gill, and spleen after stimulation with lipopolysaccharides (LPS). Subcellular localization analysis shows that the EcVDAC1 protein colocalized with the mitochondria. A caspase-3 assay demonstrates that overexpression of the EcVDAC1 induced apoptotic cell death in fathead minnow cells. The data presented in this study provide new information regarding the relationship between LPS and the EcVDAC1 gene, suggesting that the fish VDAC1 gene may play an important role in antibacterial immune response.

  19. Groupers on the edge: Shelf edge spawning habitat in and around marine reserves of the northeastern Gulf of Mexico

    Science.gov (United States)

    Coleman, F.C.; Scanlon, K.M.; Koenig, C.C.

    2011-01-01

    The northeastern Gulf of Mexico contains some of the most diverse and productive marine habitat in the United States. Much of this habitat, located on the shelf edge in depths of 50 to 120 m, supports spawning for many economically important species, including groupers. Here, we couple acoustic surveys with georeferenced videography to describe the primary spatial and geologic features of spawning aggregation sites for four economically important species: gag (Mycteroperca microlepis), scamp (M. phenax), red grouper (Epinephelus morio), and red snapper (Lutjanus campechanus), with notes on fish distribution and abundance and spawning activities. We provide information on movement patterns of reef fish determined using acoustic telemetry. Finally, we discuss the possible coupling of geomorphology with hydrographic features to influence the overall productivity of the region and the importance of spatial fishery management in sustaining that productivity. ?? 2011 by Association of American Geographers.

  20. Mercury concentrations in dusky grouper Epinephelus marginatus in littoral and neritic habitats along the Southern Brazilian coast.

    Science.gov (United States)

    Condini, Mario V; Hoeinghaus, David J; Roberts, Aaron P; Soulen, Brianne K; Garcia, Alexandre M

    2017-02-15

    Our study incorporated a comprehensive suite of parameters (i.e., body size, age, diet and trophic position) to investigate mercury concentration in dusky groupers Epinephelus marginatus. This study was carried out in rocky bottoms in littoral and neritic habitats along the Southern Brazilian coast. We also determined spatial variation in mercury concentrations in individuals inhabiting both zones, which may provide insights into how dietary differences or potential pollution sources affect bioaccumulation. A total of 244 dusky groupers was analyzed to determine total mercury concentrations. Our study revealed that when considering similar body sizes, individuals inhabiting littoral rocky habitats had higher concentrations of mercury probably due to proximity to pollution sources associated with human activities in the estuary and its drainage basin. Furthermore, large individuals (>650mm and >8years old) showed mercury contamination levels that are potentially harmful for this endangered fish species and above the acceptable limits for human consumption.

  1. Detection of Potato Leaf Roll Virus (PLRV), Potato Virus Y (PVY) and Potato Virus X (PVX) on Five Potato Varieties by Using of DAS-ELISA and RT-PCR Methods

    OpenAIRE

    Kuswinanti, Tutik

    2012-01-01

    Potato is a staple food crop that widely grown around the world. Virus infection is main factor that affects great loss of the potato production. Potato virus X(PVX), potato virus Y(PVY),and potato leaf roll virus(PLRV) are top three viruses that result in decreased yield of potato in Indonesia. Therefore, the rapid methods of DAS-ELISA was studied to test tuber samples of five potato varieties, Granola, Atlantik, Raja, Super John, Kalosi, and Masalle. Two simple, rapid, sensitive, reliable...

  2. Fate of toxic potato glycoalkaloids in a potato field.

    Science.gov (United States)

    Jensen, Pia H; Strobel, Bjarne W; Hansen, Hans Christian B; Jacobsen, Ole Stig

    2009-04-08

    The toxic glycoalkaloids, alpha-solanine and alpha-chaconine, are present in all parts of the potato plant and are possibly transferred to the terrestrial environment. The amounts of glycoalkaloids in plant, soil, and groundwater were followed in a potato field to investigate their distribution and fate during the season. The amount of glycoalkaloids in the plants was up to 25 kg/ha during maturity and decreased to below 0.63 kg/ha during plant senescence. The glycoalkaloids were detected in the upper soil (up to 0.6 kg/ha); this amount accounted only for a minor fraction of the amount present in the plants. Maximum glycoalkaloid concentration of 2.8 mg/kg dry weight soil was detected in September. Dissipation during winter appeared to be slow because glycoalkaloids were still present in the soil in March. No traces of glycoalkaloids were detected in the groundwater (detection limit 0.2 microg/L). From these results, the leaching potential of the glycoalkaloids is evaluated to be small.

  3. The potato tuber mitochondrial proteome

    DEFF Research Database (Denmark)

    Møller, Ian Max; Salvato, Fernanda; Havelund, Jesper

    We are testing the hypothesis that oxidized peptides are released from stressed mitochondria and contribute to retrograde signalling (Møller IM & Sweetlove LJ 2010 Trends Plant Sci 15, 370-374). However, there is a large gap between the number of experimentally verified mitochondrial proteins (~450......) and in silico-predicted mitochondrial proteins (2000-3000). Thus, before starting to look for oxidized peptides, we wanted to expand the current compendium of plant mitochondrial proteins while obtaining what could be termed the "baseline proteome" from our model organelle, the potato tuber mitochondrion. Its...

  4. The Potato Tuber Mitochondrial Proteome

    DEFF Research Database (Denmark)

    Salvato, Fernanda; Havelund, Jesper F; Chen, Mingjie

    2014-01-01

    manner using normalized spectral counts including as many as 5-fold more “extreme” proteins (low mass, high isoelectric point, hydrophobic) than previous mitochondrial proteome studies. We estimate that this compendium of proteins represents a high coverage of the potato tuber mitochondrial proteome...... that more than 50% of the identified proteins harbor at least one modification. The most prominently observed class of posttranslational modifications was oxidative modifications. This study reveals approximately 500 new or previously unconfirmed plant mitochondrial proteins and outlines a facile strategy...... for unbiased, near-comprehensive identification of mitochondrial proteins and their modified forms....

  5. Siim Nestor soovitab : Back2Bass Helsinki. Teenage Kicks / Siim Nestor

    Index Scriptorium Estoniae

    Nestor, Siim, 1974-

    2002-01-01

    Soome trummi-ja-bassi klubi Back2Bass 28. septembril KuKu klubis Tallinnas. 28. sept. Von Krahlis toimuvast live-üritusest Teenage Kicks, kus ansambel Claire's Birthaday esitleb ka oma uut singlit "Do You Remember"

  6. Siim Nestor soovitab : Back2Bass Helsinki. Teenage Kicks / Siim Nestor

    Index Scriptorium Estoniae

    Nestor, Siim, 1974-

    2002-01-01

    Soome trummi-ja-bassi klubi Back2Bass 28. septembril KuKu klubis Tallinnas. 28. sept. Von Krahlis toimuvast live-üritusest Teenage Kicks, kus ansambel Claire's Birthaday esitleb ka oma uut singlit "Do You Remember"

  7. Mercury concentrations in largemouth bass of the Crystal River National Wildlife Refuge

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — From July 17 to 26, 1990, 20 largemouth bass (Micropterus salmoides) were collected from four locations at the Crystal River National Wildlife Refuge, Citrus County,...

  8. Mercury in largemouth bass of the Lake Woodruff National Wildlife Refuge

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — From August 24 to 28, 1990, largemouth bass (Micropterus salmoides) were collected from selected locations at the Lake Woodruff National Wildlife Refuge, Volusia...

  9. Ocean acidification impacts on black sea bass and scup embryos, responses of finfish in laboratory experiments

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Black sea bass (Centropristis striata) and scup (Stenotomus chrysops) compose important recreational and commercial fisheries along the United States Atlantic coast....

  10. Mercury concentrations in largemouth bass and other fishes of the Loxahatchee National Wildlife Refuge

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — From September 17-21, 1990, 32 largemouth bass (Micropterus salmoides) and three other fish species were collected from eight locations at the Loxahatchee National...

  11. Mercury in largemouth bass and other fishes of the Merritt Island National Wildlife Refuge

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — From August 16 to 22, 1990, largemouth bass (Micropterus salmoides), bowfin (Amia calva) and spotted seatrout (Cynoscion nebulosus) were collected from selected...

  12. Mercury in largemouth bass and spotted gar of the Florida Panther National Wildlife Refuge

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — From June 21 to 25, 1990, 21 largemouth bass (Micropterussa salmoides) and five spotted gar (Lepisosteus oculatus) were collected from selected locations at the...

  13. Contaminants in striped bass from the flint and Apalachicola Rivers 1986-1989

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — Five striped bass (Morone saxitilis), collected between April 1986 and May 1989 from the Flint River at Albany, Georgia, and the Apalachicola River at Chattahoochee,...

  14. Immunity to nervous necrosis virus infections of orange-spotted grouper (Epinephelus coioides) by vaccination with virus-like particles.

    Science.gov (United States)

    Lin, Kebing; Zhu, Zhihuang; Ge, Hui; Zheng, Leyun; Huang, Zhongchi; Wu, Shuiqing

    2016-09-01

    Nervous necrosis virus (NNV) is a kind of the betanodaviruses, which can cause viral nervous necrosis (VNN) and massive mortality in larval and juvenile stages of orange-spotted grouper (Epinephelus coioides). Due to the lack of viral genomes, virus-like particles (VLPs) are considered as one of the most promising candidates in vaccine study to control this disease. In this study, a type of VLPs, which was engineered on the basis of orange-spotted grouper nervous necrosis virus (OGNNV), was produced from prokaryotes. They possessed the similar structure and size to the native NNV. In addition, synthetic oligodeoxynucleotide (ODN) containing CpG motif was added in vaccines, and the expression patterns of several genes were analyzed after injecting with VLP and VLP with adjuvant (VA) to assess the regulation effect of vaccine for inducing immune responses. RT-PCR assays showed that six related genes in healthy tissues were ubiquitously expressed in all nine tested tissues. The vaccine alone was able to enhance the expression of genes, including MHCIa, MyD88, TLR3, TLR9 and TLR22 after vaccination, indicating that the vaccine was able to induce immune response in grouper. In liver, spleen and kidney, the gene expressions of VA group were all significantly higher than that of VLP group at 72 h post-stimulation, showing that the fish of VA challenge group obtained the longer-lasting protective immunity and resistance to pathogen challenge than that of VLP group. The data indicated that the efficacy of vaccine could be further enhanced by CpG ODN after vaccination and provided the reference for the development of future viral vaccine in grouper.

  15. Fishery of the Goliath grouper, Epinephelus itajara (Teleostei: Epinephelidae) based on local ecological knowledge and fishery records in Yucatan, Mexico

    OpenAIRE

    Aguilar-Perera, Alfonso; González-Salas, Carlos; Tuz-Sulub, Armin; Villegas-Hernández, Harold

    2008-01-01

    The Goliath grouper, Epinephelus itajara, a large-bodied (~ 2.5 m TL, > 400 kg) and critically endangered fish (Epinephelidae), is highly vulnerable to overfishing. Although protected from fishing in many countries, its exploitation in Mexico is unregulated; a situation that puts its populations at risk. Fishery records of E. itajara are scarce, which prevents determination of its fishery status. This work aimed to elucidate the E. itajara fishery in the northern Yucatan Peninsula by 1) ana...

  16. Increase in estrogen signaling in the early brain of orange-spotted grouper Epinephelus coioides: a mini-review.

    Science.gov (United States)

    Nagarajan, Ganesan; Aruna, Adimoolam; Chang, Ching-Fong

    2013-02-01

    Despite neurosteroidogenic enzymes are playing important roles in the regulation of brain development and function, the potential link between brain and gonad by the action of steroid hormones during gonadal sex differentiation is still not clear in teleosts. In this mini-review, we summarized our understanding on the early brain development related to the synthesis of neurosteroids and receptor signaling during gonadal sex differentiation in protogynous orange-spotted grouper, Epinephelus coioides (functional females for the first 6 years of life and start to sex change around the age of 7 years) and protandrous black porgy (functional males for the first 2 years of life but begin to change sex during the third year). We found a similar profile in the increased expression of brain aromatase gene (aromatatse B or cyp19a1b), aromatase activity, estradiol (E(2)), and estrogen signaling in the brain of both grouper and black porgy fish during gonadal sex differentiation. In contrast to mammals, teleost fish Cyp19a1b expressed in a unique cell type, a radial glial cell, which is acted as progenitors in the brain of developing and adult fish. In agreement with these pioneer studies, we demonstrated that the grouper cyp19a1b/Cyp19a1b was expressed in radial glial cells. Further, in vivo data in the grouper brain showed that exogenous E(2) upregulated Cyp19a1b immunoreactivity (ir) in radial glial cells. These data suggest the possible roles of Cyp19a1b and E(2) in early brain development which is presumably related to gonadal sex differentiation.

  17. Molecular clone and characterization of c-Jun N-terminal kinases 2 from orange-spotted grouper, Epinephelus coioides.

    Science.gov (United States)

    Guo, Minglan; Wei, Jingguang; Zhou, Yongcan; Qin, Qiwei

    2016-02-01

    c-Jun N-terminal kinase 2 (JNK2) is a multifunctional mitogen-activated protein kinases involving in cell differentiation and proliferation, apoptosis, immune response and inflammatory conditions. In this study, we reported a new JNK2 (Ec-JNK2) derived from orange-spotted grouper, Epinephelus coioides. The full-length cDNA of Ec-JNK2 was 1920 bp in size, containing a 174 bp 5'-untranslated region (UTR), 483 bp 3'-UTR, and a 1263 bp open reading frame (ORF), which encoded a putative protein of 420 amino acids. The deduced protein sequence of Ec-JNK2 contained a conserved Thr-Pro-Tyr (TPY) motif in the domain of serine/threonine protein kinase (S-TKc). Ec-JNK2 has been found to involve in the immune response to pathogen challenges in vivo, and the infection of Singapore grouper iridovirus (SGIV) in vitro. Immunofluorescence staining showed that Ec-JNK2 was localized in the cytoplasm of grouper spleen (GS) cells, and moved to the nucleus after infecting with SGIV. Ec-JNK2 distributed in all immune-related tissues examined. After challenging with lipopolysaccharide (LPS), SGIV and polyriboinosinic polyribocytidylic acid (poly I:C), the mRNA expression of Ec-JNK2 was significantly (P orange-spotted grouper. Over-expressing Ec-JNK2 in fathead minnow (FHM) cells increased the SGIV infection and replication, while over-expressing the dominant-negative Ec-JNK2Δ181-183 mutant decreased it. These results indicated that Ec-JNK2 could be an important molecule in the successful infection and evasion of SGIV.

  18. Ultrastructure of the anterior intestinal epithelia of the orange-spotted grouper Epinephelus coioides larvae under different feeding regimes.

    Science.gov (United States)

    Primavera-Tirol, Y H; Coloso, R M; Quinitio, G F; Ordonio-Aguilar, R; Laureta, L V

    2014-04-01

    Enterocytes of the anterior to midsection of the intestine in grouper Epinephelus coioides larvae were compared among different treatments: unfed to the point-of-no-return (PNR), fed natural food only, and co-fed natural food and artificial diet. On day 3, the nutritional condition of unfed grouper larvae regressed with its reduced enterocyte heights which were further degraded on day 4, the PNR, when all the enterocytes were in advanced stages of apoptosis. The apoptosis appeared to be internally directed via the mitochondria. Among day 3 fed larvae, enterocyte heights of those fed artificial diet did not differ from those fed natural food only. Dietary phospholipid deficiency was indicated in larvae co-fed artificial diet on day 3 with an unusually large chylomicron opening into the inter-enterocyte space, and on days 6 and 33 by intestinal steatosis. On day 19, scant to absent lipid droplets in enterocytes of larvae disclosed heightened nutritional requirement preparatory to metamorphosis. As observed in unfed day 3 and premetamorphic day 19 E. coioides, larvae undergoing critical periods and starvation during development employ apoptosis to dispose of degenerated enterocytes that are phagocytosed by adjacent healthy enterocytes without causing inflammatory distress. Upon metamorphosis, grouper larval gut develops better immunity fitness with eosinophilic granule cells observed in the intestinal epithelia of day 33 larvae. Future studies on grouper larval nutrition may consider the appropriate dietary phospholipid levels and larval competence to biosynthesize highly unsaturated fatty acid from linoleic acid vis-à-vis the use of plant ingredients in artificial diet formulations. In vivo challenge tests may validate appropriate dietary nutrient supplementation and lead to better feed formulation, matching the varying energetic demands and digestive capacities of developing E. coioides larvae.

  19. UII and UT in grouper: cloning and effects on the transcription of hormones related to growth control.

    Science.gov (United States)

    Sun, Caiyun; Duan, Da; Li, Bo; Qin, Chaobin; Jia, Jirong; Wang, Bin; Dong, Haiyan; Li, Wensheng

    2014-01-01

    Urotensin II (UII) is a cyclic peptide that was originally extracted from the caudal neurosecretory system (CNSS) of fish. UII is well known to exhibit cardiovascular, ventilatory, and motor effects in vertebrates. Studies have reported that UII exerts mitogenic effects and can act as an autocrine/paracrine growth factor in mammals. However, similar information in fish is limited. In this study, the full-length cDNAs of UII and its receptor (UT) were cloned and characterized in the orange-spotted grouper. UII and UT were expressed ubiquitously in various tissues in grouper, and particularly high levels were observed in the CNSS, CNS, and ovary. A functional study showed that UT was coupled with intracellular Ca2+ mobilization in HEK293 cells. Studies carried out using i.p. injections of UII in grouper showed the following: i) in the hypothalamus, UII can significantly stimulate the mRNA expression of ghrh and simultaneously inhibit the mRNA expression of somatostatin 1 (ss1) and ss2 3 h after injection; ii) in the pituitary, UII also significantly induced the mRNA expression of gh 6 and 12  h after injection; and iii) in the liver, the mRNA expression levels of ghr1/ghr2 and igf1/igf2 were markedly increased 12 and 3  h after the i.p. injection of UII respectively. These results collectively indicate that the UII/UT system may play a role in the promotion of the growth of the orange-spotted grouper.

  20. Measurement Error Affects Risk Estimates for Recruitment to the Hudson River Stock of Striped Bass

    OpenAIRE

    Dennis J. Dunning; Ross, Quentin E.; Munch, Stephan B.; Ginzburg, Lev R.

    2002-01-01

    We examined the consequences of ignoring the distinction between measurement error and natural variability in an assessment of risk to the Hudson River stock of striped bass posed by entrainment at the Bowline Point, Indian Point, and Roseton power plants. Risk was defined as the probability that recruitment of age-1+ striped bass would decline by 80% or more, relative to the equilibrium value, at least once during the time periods examined (1, 5, 10, and 15 years). Measurement error, estimat...

  1. Automatic Phrase Continuation from Guitar and Bass guitar Melodies

    DEFF Research Database (Denmark)

    Cherla, Srikanth; Purwins, Hendrik; Marchini, Marco

    2013-01-01

    A framework is proposed for generating interesting, and musically similar variations of a givenmonophonicmelody. The focus is on rock/pop guitar and bass-guitarmelodies with the aim of eventual extensions to other instruments and musical styles. It is demonstrated here how learning musical style...... from segmented audio data can be formulated as an unsupervised learning problem to generate a symbolic representation. A melody is first segmented into a sequence of notes using onset detection and pitch estimation. A set of hierarchical, coarse-to-fine symbolic representations of the melody...... is generated by clustering pitch values at multiple similarity thresholds. The Variance Ratio Criterion is then used to select the appropriate clustering levels in the hierarchy. Note onsets are aligned with beats, considering the estimated meter of the melody, to create a sequence of symbols that represent...

  2. A Generalized Bass Model for Product Growth in Networks

    CERN Document Server

    Manshadi, Vahideh H

    2016-01-01

    Many products and innovations become well-known and widely adopted through the social interactions of individuals in a population. The Bass diffusion model has been widely used to model the temporal evolution of adoption in such social systems. In the model, the likelihood of a new adoption is proportional to the number of previous adopters, implicitly assuming a global (or homogeneous) interaction among all individuals in the network. Such global interactions do not exist in many large social networks, however. Instead, individuals typically interact with a small part of the larger population. To quantify the growth rate (or equivalently the adoption timing) in networks with limited interactions, we study a stochastic adoption process where the likelihood that each individual adopts is proportional to the number of adopters among the small group of persons he/she interacts with (and not the entire population of adopters). When the underlying network of interactions is a random $k$-regular graph, we compute t...

  3. The biofunction of orange-spotted grouper (Epinephelus coioides) CC chemokine ligand 4 (CCL4) in innate and adaptive immunity.

    Science.gov (United States)

    Hsu, Yi-Jiou; Hou, Chia-Yi; Lin, Shih-Jie; Kuo, Wan-Ching; Lin, Han-Tso; Lin, John Han-You

    2013-12-01

    CC chemokine (motif) ligand 4 (CCL4) is indispensable to the chemoattraction of macrophages, natural killer cells, and lymphocytes in mammals; however, it has only been cloned in a limited number of fish species and information related to its biofunction remains ambiguous with regard to teleosts. To explore the role of teleost CCL4, we first evaluated the mRNA expression of the Epinephelus coioides CCL4 (gCCL4) gene in various organs under LPS and poly (I:C) stimulated; secondary, we evaluated the immune-related genes expression of fish under the recombinant gCCL4 protein stimulated. Our results revealed an increase in the mRNA of gCCL4 in immune organs immediately following stimulation by poly (I:C); however, in LPS stimulated fish, the expression did not increase until nearly 24 h after induction. In biofunction assays, recombinant gCCL4 was found to induce chemotactic activity in the peripheral blood leukocytes of groupers and up-regulate the gene expressions of grouper TNFA1 (TNF-α1), TNFA2 (TNF-α2), IFNG (IFN-γ), MX, TBX21 (T-bet), CD8 (α and β chain). These findings indicate that grouper CCL4 attracts leukocytes, induces an inflammatory response, and drives lymphocyte differentiation into the Th1 pathway.

  4. Interferon regulatory factor 10 (IRF10): Cloning in orange spotted grouper, Epinephelus coioides, and evolutionary analysis in vertebrates.

    Science.gov (United States)

    Huang, Bei; Jia, Qin Qin; Liang, Ying; Huang, Wen Shu; Nie, P

    2015-10-01

    IRF10 gene was cloned in orange spotted grouper, Epinephelus coioides, and its expression was examined following poly(I:C) stimulation and bacterial infection. The cDNA sequence of grouper IRF10 contains an open reading frame of 1197 bp, flanked by 99 bp 5'-untranslated region and 480 bp 3'- untranslated region. Multiple alignments showed that the grouper IRF10 has a highly conserved DNA binding domain in the N terminus with characteristic motif containing five tryptophan residues. Quantitative real-time PCR analysis revealed that the expression of IRF10 was responsive to both poly(I:C) stimulation and Vibrio parahemolyticus infection, with a higher increase to poly(I:C), indicating an important role of IRF10 in host immune response during infection. A phyletic distribution of IRF members was also examined in vertebrates, and IRF10 was found in most lineages of vertebrates, not in modern primates and rodents. It is suggested that the first divergence of IRF members might have occurred before the evolutionary split of vertebrate and cephalochordates, producing ancestors of IRF (1/2/11) and IRF (4/8/9/10)[(3/7) (5/6)], and that the second and/or third divergence of IRF members occurred following the split, thus leading to the subsets of the IRF family in vertebrates.

  5. Parasite fauna of wild and cultured dusky-grouper Epinephelus marginatus (Lowe, 1834 from Ubatuba, Southeastern Brazil

    Directory of Open Access Journals (Sweden)

    K Roumbedakis

    Full Text Available This study aimed at identifying and quantifying the parasites of wild and cultured dusky grouper Epinephelus marginatus. During a year and thereby all four seasons, 20 wild and 20 cultured groupers were examined for the presence of parasites, except in the last season, in which 19 wild and 20 cultured fish were examined, totalling 159 groupers analysed from Ubatuba, southeastern Brazil. Prevalence, mean intensity of infection, mean abundance and mean relative dominance were calculated. Five species of parasites were identified in fish from both origins: Pseudorhabdosynochus beverleyburtonae (Monogenea, Neobenedenia melleni (Monogenea, Pseudempleurosoma sp. (Monogenea, Helicometrina nimia (Digenea and larvae of Contracaecum sp. (Nematoda. The prevalence of ectoparasites, in most cases, was higher than endoparasites. The most abundant parasite was the monogenea Pseudorhabdosynochus beverleyburtonae in both wild and cultured fish, along all seasons. Neobenedenia melleni was observed in wild and cultured fish in all seasons, with a gradual increase in the number of parasites from the coldest to the hottest seasons, with the highest prevalence and mean intensity in the summer. Helicometrina nimia was found in all seasons in both wild and cultured fish, except for summer, where its presence was detected only in wild fish. Pseudempleurosoma sp. and larvae of Contracaecum sp. showed low prevalence occurring in wild and cultured fish in the autumn and spring, respectively. This study revealed high intensities of potentially pathogenic parasites that could favour disease outbreaks in culture conditions.

  6. Selection and characterization of novel DNA aptamers specifically recognized by Singapore grouper iridovirus-infected fish cells.

    Science.gov (United States)

    Li, Pengfei; Wei, Shina; Zhou, Lingli; Yang, Min; Yu, Yepin; Wei, Jingguang; Jiang, Guohua; Qin, Qiwei

    2015-11-01

    Singapore grouper iridovirus (SGIV) is a major viral pathogen of grouper aquaculture, and has caused heavy economic losses in China and South-east Asia. In this study, we generated four ssDNA aptamers against SGIV-infected grouper spleen (GS) cells using SELEX (systematic evolution of ligands by exponential enrichment) technology. Four aptamers exhibited high affinity to SGIV-infected GS cells, in particular the Q2 aptamer. Q2 had a binding affinity of 12.09 nM, the highest of the four aptamers. These aptamers also recognized SGIV-infected tissues with high levels of specificity. Protease treatment and flow cytometry analysis of SGIV-infected cells revealed that the target molecules of the Q3, Q4 and Q5 aptamers were trypsin-sensitive proteins, whilst the target molecules of Q2 might be membrane lipids or surface proteins that were not trypsin-sensitive. The generated aptamers appeared to inhibit SGIV infection in vitro. Aptamer Q2 conferred the highest levels of protection against SGIV and was able to inhibit SGIV infection in a dose-dependent manner. In addition, Q2 was efficiently internalized by SGIV-infected GS cells and localized at the viral assembly sites. Our results demonstrated that the four novel aptamers we generated were specific for SGIV-infected cells and could potentially be applied as rapid molecular diagnostic test reagents or therapeutic drugs targeting SGIV.

  7. Molecular identification of Atlantic goliath grouper Epinephelus itajara (Lichtenstein, 1822 (Perciformes: Epinephelidae and related commercial species applying multiplex PCR

    Directory of Open Access Journals (Sweden)

    Júnio S. Damasceno

    Full Text Available ABSTRACT The Atlantic goliath grouper, Epinephelus itajara , is a critically endangered species, threatened by illegal fishing and the destruction of its habitats. A number of other closely related grouper species found in the western Atlantic are also fished intensively. While some countries apply rigorous legislation, illegal harvesting followed by the falsification of fish products, which impedes the correct identification of the species, is a common practice, allowing the catch to be marketed as a different grouper species. In this case, molecular techniques represent an important tool for the monitoring and regulation of fishery practices, and are essential for the forensic identification of a number of different species. In the present study, species-specific primers were developed for the Cytochrome Oxidase subunit I gene, which were applied in a multiplex PCR for the simultaneous identification of nine different species of Epinephelidae: Epinephelus itajara , E. quinquefasciatus , E. morio , Hyporthodus flavolimbatus , H. niveatus , Mycteroperca acutirostris , M. bonaci , M. marginata , and M. microlepis . Multiplex PCR is a rapid, reliable and cost-effective procedure for the identification of commercially-valuable endangered fish species, and may represent a valuable tool for the regulation and sustainable management of fishery resources.

  8. Estradiol-induced gene expression in largemouth bass (Micropterus salmoides)

    Science.gov (United States)

    Bowman, C.J.; Kroll, K.J.; Gross, T.G.; Denslow, N.D.

    2002-01-01

    Vitellogenin (Vtg) and estrogen receptor (ER) gene expression levels were measured in largemouth bass to evaluate the activation of the ER-mediated pathway by estradiol (E2). Single injections of E2 ranging from 0.0005 to 5 mg/kg up-regulated plasma Vtg in a dose-dependent manner. Vtg and ER mRNAs were measured using partial cDNA sequences corresponding to the C-terminal domain for Vtg and the ligand-binding domain of ER?? sequences. After acute E2-exposures (2 mg/kg), Vtg and ER mRNAs and plasma Vtg levels peaked after 2 days. The rate of ER mRNA accumulation peaked 36-42 h earlier than Vtg mRNA. The expression window for ER defines the primary response to E2 in largemouth bass and that for Vtg a delayed primary response. The specific effect of E2 on other estrogen-regulated genes was tested during these same time windows using differential display RT-PCR. Specific up-regulated genes that are expressed in the same time window as Vtg were ERp72 (a membrane-bound disulfide isomerase) and a gene with homology to an expressed gene identified in zebrafish. Genes that were expressed in a pattern that mimics the ER include the gene for zona radiata protein ZP2, and a gene with homology to an expressed gene found in winter flounder. One gene for fibrinogen ?? was down-regulated and an unidentified gene was transiently up-regulated after 12 h of exposure and returned to basal levels by 48 h. Taken together these studies indicate that the acute molecular response to E2 involves a complex network of responses over time. ?? 2002 Elsevier Science Ireland Ltd. All rights reserved.

  9. PIV Application to Fluid Dynamics of Bass Reflex Ports

    Science.gov (United States)

    Rossi, Massimiliano; Esposito, Enrico; Tomasini, Enrico Primo

    A bass reflex (or vented or ported) loudspeaker system (BRS) is a particular type of loudspeaker enclosure that makes use of the combination of two second-order mechanic/acoustic devices, i.e., the driver and a Helmotz resonator, in order to create a new system with reinforced emission in the low frequency region. The resonator is composed by the box itself in which one or more ports are present with suitable shapes and dimensions. This category of loudspeaker presents several advantages compared to closed-box systems such as higher efficiency and power, smaller dimensions and reduced distortion at lower frequencies. Notwithstanding these advantages, they present some drawbacks like more complexity and unloading of the cone below the tuning frequency. Moreover, at high power levels the airflow in the port(s) may generate unwanted noises due to turbulence as well as distortion and acoustic compression. In this work we will present and compare a series of experiments conducted on two different bass reflex ports designs to assess their performance in terms of flow turbulence and sound-level compression at high input power levels. These issues are quite important in professional sound systems, where increasing power levels and sound clarity require exponentially growing cost and weight. For these reasons it is vital to optimize port design. To the knowledge of the authors there does not exist an accurate, nonintrusive experimental full-field study of air flows emitting from reflex ports in operating conditions. In this work, the experimental fluid dynamic investigation has been conducted by means of PIV and LDA techniques.

  10. Fourier transform infrared spectroscopy as a tool to study farmed and wild sea bass lipid composition.

    Science.gov (United States)

    Vidal, Natalia P; Goicoechea, Encarnación; Manzanos, María J; Guillén, María D

    2014-05-01

    The lipids of 16 farmed and wild European sea bass (Dicentrarchus labrax) samples were studied by Fourier transform infrared (FTIR) spectroscopy. The spectroscopic parameters which would be useful when distinguishing between both fish origins were analysed. It was shown, for the first time, that the frequency and the ratio between the absorbance of certain bands are efficient and reliable authentication tools for the origin of sea bass. Furthermore, relationships between infrared data and fish lipids composition referring to the molar percentage or concentration of certain acyl groups were also studied. It was proved that some infrared spectroscopic data (the frequency of certain bands or the ratio of the absorbance of others), are very closely related to the composition of sea bass lipids. It was shown for the first time that certain infrared spectroscopic data could predict, with a certain degree of approximation, the molar percentage, or concentration, of omega-3, docosahexaenoic (DHA) and di-unsaturated omega-6 (linoleic) in sea bass lipids. The consistency of the results confirms the usefulness of FTIR spectroscopy to detect frauds regarding sea bass origin, and to provide important compositional data about sea bass lipids from the nutritional and technological point of view. © 2013 Society of Chemical Industry.

  11. Linking habitat use of Hudson River striped bass to accumulation of polychlorinated biphenyl congeners

    Energy Technology Data Exchange (ETDEWEB)

    Ashley, J.T.F.; Secor, D.H.; Zlokovitz, E.; Wales, S.Q.; Baker, J.E.

    2000-03-15

    Since 1976, the commercial striped bass fishery in the Hudson River (NY) has been closed due to total polychlorinated biphenyl (t-PCB) concentrations that exceed the US Food and Drug Administration's advisory level of 2 {micro}g/g-wet weight. Extensive monitoring of Hudson River striped bass demonstrated much more variability in t-PCB levels among individual striped bass than could be explained by their age, sex, or lipid contents. To investigate the possible role of differential habitat use among subpopulations of striped bass in controlling their PCB exposures, 70 fish collected throughout the Hudson River estuary and Long Island Sound in 1994--1995 were analyzed for PCB congeners, and their lifetime migration behaviors were estimated by otolith microchemistry. The mean salinity encountered during the fish's last growth season prior to capture was inversely correlated with the t-PCB body burden. Striped bass permanently residing in fresh and oligohaline portions of the estuary adjacent to known PCB sources had elevated t-PCB levels and congeneric patterns with higher proportions of di-, tri-, and tetrachlorobiphenyls. Conversely, fish spending the majority of their life in more saline waters of the estuary or migrating frequently throughout the salinity gradient contained lower PCB levels composed of more highly chlorinated congeners. The approach used in this study allows habitat use to be incorporated into exposure assessments for anadromous fish species such as striped bass.

  12. Acrylamide Mitigation Procedures in Fried Potatoes

    DEFF Research Database (Denmark)

    Pedreschi, Franco; Kaack, Karl; Granby, Kit

    2008-01-01

    Acrylamide diminishing in potato slices and strips was studied in relation to frying temperature and some pre-treatments. Potato slices (Tivoli variety, diameter 37 mm, width: 2.2 mm) were fried at 150, 170 and 190 degrees C until reaching moisture contents of similar to 1.8 percent Prior to frying......, potato slices were treated in one of the following ways: (i) blanched in hot water at six different time-temperature combinations (50 degrees C for 30 and 70 min; 70 degrees C for 8 and 40 min; 90 degrees C for 2 and 9 min); (ii) immersed in a citric acid solutions of 10 g/L for half an hour Potato...... strips (0.8 x 0.8 x 5 cm) of Bintje variety were fried at 150, 170 and 190 degrees C until reaching moisture contents of similar to 40 percent. Prior to frying, potato strips were treated in similar ways to potato slices. Glucose and asparagine contents were determined in potato slices and strips before...

  13. Hybrid origins of cultivated potatoes.

    Science.gov (United States)

    Rodríguez, Flor; Ghislain, Marc; Clausen, Andrea M; Jansky, Shelley H; Spooner, David M

    2010-10-01

    Solanum section Petota is taxonomically difficult, partly because of interspecific hybridization at both the diploid and polyploid levels. The taxonomy of cultivated potatoes is particularly controversial. Using DNA sequence data of the waxy gene, we here infer relationships among the four species of cultivated potatoes accepted in the latest taxonomic treatment (S. ajanhuiri, S. curtilobum, S. juzepczukii and S. tuberosum, the latter divided into the Andigenum and Chilotanum Cultivar Groups). The data support prior ideas of hybrid origins of S. ajanhuiri from the S. tuberosum Andigenum Group (2x = S. stenotomum) × S. megistacrolobum; S. juzepczukii from the S. tuberosum Andigenum Group (2x = S. stenotomum) × S. acaule; and S. curtilobum from the S. tuberosum Andigenum Group (4x = S. tuberosum subsp. andigenum) × S. juzepczukii. For the tetraploid cultivar-groups of S. tuberosum, hybrid origins are suggested entirely within much more closely related species, except for two of three examined accessions of the S. tuberosum Chilotanum Group that appear to have hybridized with the wild species S. maglia. Hybrid origins of the crop/weed species S. sucrense are more difficult to support and S. vernei is not supported as a wild species progenitor of the S. tuberosum Andigenum Group.

  14. Characterization of potato leaf starch.

    Science.gov (United States)

    Santacruz, Stalin; Koch, Kristine; Andersson, Roger; Aman, Per

    2004-04-07

    The starch accumulation-degradation process as well as the structure of leaf starch are not completely understood. To study this, starch was isolated from potato leaves collected in the early morning and late afternoon in July and August, representing different starch accumulation rates. The starch content of potato leaves varied between 2.9 and 12.9% (dry matter basis) over the night and day in the middle of July and between 0.6 and 1.5% in August. Scanning electron microscopy analyses of the four isolated starch samples showed that the granules had either an oval or a round shape and did not exceed 5 microm in size. Starch was extracted by successive washing steps with dimethyl sulfoxide and precipitated with ethanol. An elution profile on Sepharose CL-6B of debranched starch showed the presence of a material with a chain length distribution between that generally found for amylose and amylopectin. Amylopectin unit chains of low molecular size were present in a higher amount in the afternoon than in the morning samples. What remains at the end of the night is depleted in specific chain lengths, mainly between DP 15 and 24 and above DP 35, relative to the end of the day.

  15. Kinetics of dehydration of potato and development of baked product based on dehydrated potato

    OpenAIRE

    Sarker, A.; M.N. Islam; Shaheb, M.R.

    2012-01-01

    The aims of this study were to determine the kinetics of dehydration of high yielding potato variety (Diamont), to investigate the various process parameters influencing mechanical drying of potatoes and to develop baked product from the dehydrated potato. From the developed equation it was found that the diffusion co-efficient increased with the increase in temperature. The exponential relationship between diffusion co-efficient (De) versus inverse absolute temperature (Tabs-1), activation e...

  16. Effects of a Dissostichus mawsoni-CaM recombinant proteins feed additive on the juvenile orange-spotted grouper (Epinephelus coioides) under the acute low temperature challenge.

    Science.gov (United States)

    Luo, Sheng-Wei; Wang, Wei-Na; Cai, Luo; Qi, Zeng-Hua; Wang, Cong; Liu, Yuan; Peng, Chang-Lian; Chen, Liang-Biao

    2015-10-01

    The effects of Dissostichus mawsoni-Calmodulin (Dm-CaM) on growth performance, enzyme activities, respiratory burst, MDA level and immune-related gene expressions of the orange-spotted grouper (Epinephelus coioides) exposed to the acute low temperature stress were evaluated. The commercial diet supplemented with Dm-CaM protein was fed to the groupers for 6 weeks. No significant difference was observed in the specific growth rates, weight gains and survivals. After the feeding trial, the groupers were exposed to acute low temperature challenge. The groupers fed with Dm-CaM additive diet showed a significant decrease in the respiratory burst activity, while the blood cell number increased significantly at 25 °C by comparing with the control and additive control group. The enzymatic activity of SOD, ACP and ALP increased significantly in Dm-CaM additive group, while MDA level maintained stable with the lowest value. qRT-PCR analysis indicated that the up-regulated transcript expressions of CaM, C3, SOD2, LysC and HSPA4 were observed in Dm-CaM additive group. These results indicated that Dm-CaM additive diet may regulate the grouper immune response to the acute low temperature challenge.

  17. Storage performance of Taiwanese sweet potato cultivars

    OpenAIRE

    Huang, Che-Lun; Liao, Wayne C.; Chan, Chin-Feng; Lai, Yung-Chang

    2013-01-01

    Three sweet potato cultivars (TNG57, TNG66, and TNG73), provided by the Taiwanese Agricultural Research Institute (TARI), were stored at either 15 °C or under ambient conditions (23.8 ~ 28.4 °C and 77.1 ~ 81.0 % of relative humidity). Sweet potato roots were randomly chosen from each replicate and evaluated for measurement of weight loss, sugar content analysis, and sprouting after 0, 14, 24, 48, 56, 70, 84, and 98 days of storage. Fresh sweet potato roots were baked at 200 °C for 60 min then...

  18. Heat toxicant contaminant mitigation in potato chips

    DEFF Research Database (Denmark)

    Mariotti, Maria; Cortes, Pablo; Fromberg, Arvid

    2015-01-01

    was to mitigate the furan and acrylamide formation in potato chips without increasing their oil uptake by optimizing the blanching treatment before final frying. Potato slices were blanched in order to simultaneously leach out ascorbic acid and reducing sugars, the most important precursors of furan...... and acrylamide generation in thermally treated starchy foods. A central composite design was implemented to optimize the temperature-time blanching conditions under which furan, acrylamide and oil content in potato chips were minimized. The optimum blanching conditions were 64 degrees C and 17 min in which...

  19. Participatory assessment of potato production constraints and trait preferences in potato cultivar development in Rwanda

    Directory of Open Access Journals (Sweden)

    Jean Baptiste Muhinyuza

    2012-09-01

    Full Text Available Potato (Solanum tuberosum L. is the major food and cash crop in the highland regions of Rwanda. However, farmers are not integrated into the potato breeding process. The objectives of this research were to identify farmers’ key potato production constraints and establish preferred traits in potato cultivar development in Rwanda. A participatory rural appraisal (PRA study was conducted through structured survey involving 144 households and 22 focus groups with 258 participants in Musanze, Gicumbi and Nyamagabe districts. The structured survey used a questionnaire administered to farmers to collect information on importance of potatoes and other main crops. While focus groups discussions used matrix scoring of key production constraints and pair-wise ranking of traits. Potato is the most important food and cash crop, followed by maize, beans and wheat. The dominant potato varieties are Kirundo, Cruza, Mabondo and Victoria. The most important potato production constraints are lack of access to credit, lack of high yielding cultivars, insufficient clean seeds and late blight disease. Variety Mabondo is the most tolerant to late blight, followed by Cruza, Kirundo, Kinigi and Rutuku in all the districts. High yield, disease tolerance and high dry matter content are the most important attributes preferred by farmers. Active farmer participation in early breeding stages is critical for a successful potato breeding programme.

  20. Description of two new gill myxozoans from smallmouth (Micropterus dolomieu) and largemouth bass (Micropterus salmoides)

    Science.gov (United States)

    Walsh, Heather L.; Iwanowicz, Luke R.; Glenney, Gavin W.; Iwanowicz, Deborah D.; Blazer, Vicki

    2012-01-01

    Two previously undescribed species of myxozoan parasites were observed in the gills of bass inhabiting the Potomac and James River basins. They are described using morphological characteristics and small-subunit (SSU) rDNA gene sequences. Both were taxonomically identified as new species of Myxobolus; Myxobolus branchiarum n. sp. was found exclusively in smallmouth bass, and Myxobolus micropterii n. sp. was found in largemouth and smallmouth bass. Small, spherical, white plasmodia of M. branchiarum from smallmouth bass were observed grossly in the gills; these plasmodia had an average length of 320.3 µm and width of 246.1 µm. The development of the plasmodia is intralamellar in the secondary lamellae of the gills. Mature spores were pyriform in shape with a length of 12.8 ± 1.4 (8.1–15.1) µm and width of 6.9 ± 1.1 (4.0–9.0) µm. Analysis of SSU rDNA identified M. branchiarum in a sister-group to 3 species of Henneguya, although morphologically caudal appendages were absent. Myxobolus micropterii observed in the gills of largemouth and smallmouth bass had larger, ovoid, cream-colored plasmodia with an average length of 568.1 µm and width of 148.1 µm. The cysts developed at the distal end of the gill filament within the primary lamellae. The mature spores were ovoid in shape with a length of 10.8 ± 0.7 (9.2–12.2) µm and width of 10.6 ± 0.6 (9.0–11.8) µm. SSU rDNA analysis placed M. micropterii in a sister group with Henneguya lobosa and Myxobolus oliveirai. The highest prevalence of M. branchiarum was observed in the gills of bass collected from the Cowpasture River (50.9%). Prevalence was 44.6% in bass from the Potomac River and only 4.3% in bass collected from the Shenandoah River. A seasonal study of M. branchiarum, which included both infected and uninfected smallmouth bass, determined that a significantly higher intensity was observed in the spring than in the summer (P < 0.001) or fall (P  =  0.004). In an analysis excluding uninfected

  1. Analysis of Seed Potato Systems in Ethiopia

    NARCIS (Netherlands)

    Hirpa, A.; Meuwissen, M.P.M.; Tesfaye, A.; Lommen, W.J.M.; Oude Lansink, A.G.J.M.; Tsegaye, A.; Struik, P.C.

    2010-01-01

    This study aimed to analyze the seed potato systems in Ethiopia, identify constraints and prioritize improvement options, combining desk research, rapid appraisal and formal surveys, expert elicitation, field observations and local knowledge. In Ethiopia, informal, alternative and formal seed system

  2. Climate risks on potato yield in Europe

    Science.gov (United States)

    Sun, Xun; Lall, Upmanu

    2016-04-01

    The yield of potatoes is affected by water and temperature during the growing season. We study the impact of a suite of climate variables on potato yield at country level. More than ten climate variables related to the growth of potato are considered, including the seasonal rainfall and temperature, but also extreme conditions at different averaging periods from daily to monthly. A Bayesian hierarchical model is developed to jointly consider the risk of heat stress, cold stress, wet and drought. Future climate risks are investigated through the projection of future climate data. This study contributes to assess the risks of present and future climate risks on potatoes yield, especially the risks of extreme events, which could be used to guide better sourcing strategy and ensure food security in the future.

  3. Analysis of Seed Potato Systems in Ethiopia

    NARCIS (Netherlands)

    Hirpa, A.; Meuwissen, M.P.M.; Tesfaye, A.; Lommen, W.J.M.; Oude Lansink, A.G.J.M.; Tsegaye, A.; Struik, P.C.

    2010-01-01

    This study aimed to analyze the seed potato systems in Ethiopia, identify constraints and prioritize improvement options, combining desk research, rapid appraisal and formal surveys, expert elicitation, field observations and local knowledge. In Ethiopia, informal, alternative and formal seed

  4. Analysis of Seed Potato Systems in Ethiopia

    NARCIS (Netherlands)

    Hirpa, A.; Meuwissen, M.P.M.; Tesfaye, A.; Lommen, W.J.M.; Oude Lansink, A.G.J.M.; Tsegaye, A.; Struik, P.C.

    2010-01-01

    This study aimed to analyze the seed potato systems in Ethiopia, identify constraints and prioritize improvement options, combining desk research, rapid appraisal and formal surveys, expert elicitation, field observations and local knowledge. In Ethiopia, informal, alternative and formal seed system

  5. Cooking Potatoes: Experimentation and Mathematical Modeling.

    Science.gov (United States)

    Chen, Xiao Dong

    2002-01-01

    Describes a laboratory activity involving a mathematical model of cooking potatoes that can be solved analytically. Highlights the microstructure aspects of the experiment. Provides the key aspects of the results, detailed background readings, laboratory procedures and data analyses. (MM)

  6. Sweet Potato Ketchup: Feasibility, Acceptability, and Production ...

    African Journals Online (AJOL)

    food businesses in East African urban areas. ... We assessed the feasibility, consumer acceptability, and cost of production for a ... The yellow flesh colour of the sweet potato had a good influence on the final consumer preference of the product.

  7. Production of Bioethanol from Waste Potato

    Directory of Open Access Journals (Sweden)

    Merve Duruyurek

    2015-02-01

    Full Text Available Using primary energy sources in World as fossil fuels, causes air pollution and climate change. Because of these reasons, people looking for renewable energy suppliers which has less carbondioxide and less pollution. Carbon in biofuels is producing from photosynthesis. For this, burning biofuels don’t increase carbondioxide in atmosphere. Scientists predict that plants with high carbonhydrate and protein contents are 21. centuries biofuels. Potatoes are producing over 280 million in whole world and Turkey is 6th potato producer. Turkey produces 5250000 tonne of potatoes. Approximately 20% of potatoes are waste in Niğde. Our study aimed to produce bioethanol from Solanum tuberosum by using the yeast Saccharomyces cerevisiae. As a result renewable energy sources can be produced from natural wastes.

  8. Development of a multiplex AmpliDet RNA for the simultaneous detection of Potato leafroll virus and Potato virus Y in potato tubers

    NARCIS (Netherlands)

    Klerks, M.M.; Leone, G.O.M.; Verbeek, M.; Heuvel, van den J.F.J.M.; Schoen, C.D.

    2001-01-01

    A novel isothermal multiplex AmpliDet RNA system is described for the simultaneous amplification and detection of Potato leafroll virus (PLRV) and Potato virus Y (PVY) in seed potatoes. The risk of contamination by carry-over during diagnostic screening is eliminated by performing the reaction in a

  9. Behavioural thermoregulation and bioenergetics of riverine smallmouth bass associated with ambient cold-period thermal refuge

    Science.gov (United States)

    Westhoff, Jacob T.; Paukert, Craig P.; Ettinger-Dietzel, Sarah; Dodd, H.R.; Siepker, Michael

    2016-01-01

    Smallmouth bass in thermally heterogeneous streams may behaviourally thermoregulate during the cold period (i.e., groundwater temperature greater than river water temperature) by inhabiting warm areas in the stream that result from high groundwater influence or springs. Our objectives were to determine movement of smallmouth bass (Micropterus dolomieu) that use thermal refuge and project differences in growth and consumption among smallmouth bass exhibiting different thermal-use patterns. We implanted radio transmitters in 29 smallmouth bass captured in Alley Spring on the Jacks Fork River, Missouri, USA, during the winter of 2012. Additionally, temperature archival tags were implanted in a subset of nine fish. Fish were tracked using radio telemetry monthly from January 2012 through January of 2013. The greatest upstream movement was 42.5 km, and the greatest downstream movement was 22.2 km. Most radio tagged fish (69%) departed Alley Spring when daily maximum river water temperature first exceeded that of the spring (14 °C) and during increased river discharge. Bioenergetic modelling predicted that a 350 g migrating smallmouth bass that used cold-period thermal refuge would grow 16% slower at the same consumption level as a fish that did not seek thermal refuge. Contrary to the bioenergetics models, extrapolation of growth scope results suggested migrating fish grow 29% more than fish using areas of stream with little groundwater influence. Our results contradict previous findings that smallmouth bass are relatively sedentary, provide information about potential cues for migratory behaviour, and give insight to managers regarding use and growth of smallmouth bass in thermally heterogeneous river systems.

  10. Rheological and Thermal Properties of Potato Starch

    Institute of Scientific and Technical Information of China (English)

    Zhong Geng; Li Tian-zhen; Zhang Wei-min; Li Hao-nan

    2005-01-01

    Particle size, rheological and thermal properties of potato starch from Yunnan province of China was in-vestigated. The particle size ranges from 0.429-102.3 um determined by laser light-scatter. The major flow type of 6 w/v% potato starch was shear-thinning fluid even the shear rate up to 800·s-1, and the gel formed by 6 w/v% potato starch fell to weak gel for its little difference between G' and G'', high dependence on frequency and low value of G'(Pa). The hardness and cohesiveness of potato starch gel were 31.3 g and 131.9 g·s, respectively. The thermal properties of potato starch were also determined by DSC at the starch:water=3:1. The To, Tp, and ΔH of potato starch were 62.23℃,67.31℃, and 2.22 J·g-1.

  11. Characterization of c-Jun from orange-spotted grouper, Epinephelus coioides involved in SGIV infection.

    Science.gov (United States)

    Wei, Shina; Huang, Youhua; Huang, Xiaohong; Qin, Qiwei

    2015-03-01

    The nuclear phosphoprotein c-Jun is a member of the AP1 family of transcription activating complex, can be induced by various extracellular stimuli such as virus infection. In this study, the c-Jun gene (Ec-c-Jun) was cloned from orange-spotted grouper, Epinephelus coioides. The full-length Ec-c-Jun cDNA is composed of 2046 bp and encodes a polypeptide of 328 amino acids with 81% identity of zebrafish. Amino acid alignment analysis indicated that Ec-c-Jun contained three conserved domains including a transactivation domain (TAD), a DNA-binding domain (DBD) and leucine zipper domain (LZD). RT-PCR results showed that Ec-c-Jun transcript was most abundant in spleen, kidney, heart and gill. The expression of Ec-c-Jun was up-regulated after challenged with Singapore grouper iridovirus (SGIV). To investigate the roles of Ec-c-Jun during SGIV infection, we constructed its dominant-negative mutant (DN-Ec-c-Jun) by deleting the major TAD that lacks amino acids 3-122. Fluorescence microscopy observation revealed that Ec-c-Jun and DN-Ec-c-Jun were expressed predominantly in the nucleus in transfected cells. Interestingly, the green fluorescence of Ec-c-Jun was congregated and co-localized with virus assembly sites at the late stage of SGIV infection. However, in DN-Ec-c-Jun transfected cells, no virus assembly sites were observed, and the distribution of fluorescence remained unchanged. Moreover, overexpression of DN-Ec-c-Jun in vitro delayed the occurrence of CPE induced by SGIV infection and inhibited the virus gene transcription. In addition, ectopic expression of DN-Ec-c-Jun was able to inhibit SGIV induced c-Jun/AP1 promoter activity in GS cells. Thus, we proposed that c-Jun transcription factor was essential for SGIV replication in vitro. Our results will contribute to understanding the crucial roles of JNK signaling pathway in fish virus infection.

  12. Potato: A Favorable Crop for Plant Molecular Farming

    Institute of Scientific and Technical Information of China (English)

    Sunil Kumar G B; Ganapathi T R; Bapat V A

    2006-01-01

    Potato is one of the important food crops with a high yield potential and nutritional value. It has been used extensively for molecular farming to produce vaccines, antibodies and industrial enzymes. It has several desirable attributes as a favorable crop for the production of recombinant proteins. Potato tubers were employed for bulk production of recombinant antibodies. Vaccine production in potato has progressed to human clinical trials. Human milk proteins were successfully expressed in potato tubers. Potato hairy roots offer as another attractive system for the production of useful recombinant proteins both as intra cellular and secreted forms. This review describes the use of potato as a prospective host for plant molecular farming.

  13. Modeling the potential spread of the recently identified non-native panther grouper (Chromileptes altivelis in the Atlantic using a cellular automaton approach.

    Directory of Open Access Journals (Sweden)

    Matthew W Johnston

    Full Text Available The Indo-pacific panther grouper (Chromileptes altiveli is a predatory fish species and popular imported aquarium fish in the United States which has been recently documented residing in western Atlantic waters. To date, the most successful marine invasive species in the Atlantic is the lionfish (Pterois volitans/miles, which, as for the panther grouper, is assumed to have been introduced to the wild through aquarium releases. However, unlike lionfish, the panther grouper is not yet thought to have an established breeding population in the Atlantic. Using a proven modeling technique developed to track the lionfish invasion, presented is the first known estimation of the potential spread of panther grouper in the Atlantic. The employed cellular automaton-based computer model examines the life history of the subject species including fecundity, mortality, and reproductive potential and combines this with habitat preferences and physical oceanic parameters to forecast the distribution and periodicity of spread of this potential new invasive species. Simulations were examined for origination points within one degree of capture locations of panther grouper from the United States Geological Survey Nonindigenous Aquatic Species Database to eliminate introduction location bias, and two detailed case studies were scrutinized. The model indicates three primary locations where settlement is likely given the inputs and limits of the model; Jupiter Florida/Vero Beach, the Cape Hatteras Tropical Limit/Myrtle Beach South Carolina, and Florida Keys/Ten Thousand Islands locations. Of these locations, Jupiter Florida/Vero Beach has the highest settlement rate in the model and is indicated as the area in which the panther grouper is most likely to become established. This insight is valuable if attempts are to be made to halt this potential marine invasive species.

  14. Molecular cloning, characterization of one key molecule of teleost innate immunity from orange-spotted grouper (Epinephelus coioides): serum amyloid A.

    Science.gov (United States)

    Wei, Jingguang; Guo, Minglan; Ji, Huasong; Qin, Qiwei

    2013-01-01

    The orange-spotted grouper (Epinephelus coioides), a favorite marine food fish, is widely cultured in China and Southeast Asian countries. However, little is known about its acute phase response (APR) caused by viral diseases. Serum amyloid A (SAA) is a major acute phase protein (APP). In this study, a new SAA homologous (EcSAA) gene was cloned from grouper, E. coioides, by rapid amplification of cDNA ends (RACE) PCR. The full-length cDNA sequence of SAA was 508 bp and contained a 363 bp open reading frame (ORF) coding for a protein of 121 aa. Similar to other fish known SAA genes, the EcSAA gene contained four exons and three introns. Quantitative real-time PCR analysis revealed that EcSAA mRNA is predominately expressed in liver and gill of grouper. Furthermore, the expression of EcSAA was differentially up-regulated in liver after infection with Staphyloccocus aureus, Vibrio vulnificus, Vibrio parahaemolyticus, Saccharomyces cerevisiae and Singapore grouper iridovirus (SGIV). Recombinant EcSAA (rEcSAA) was expressed in Escherichia BL21 (DE3) and purified for mouse anti-EcSAA serum preparation. The rEcSAA fusion protein was demonstrated to bind to all tested bacteria and yeast, and inhibit the replication of SGIV. Overexpression of EcSAA in grouper spleen (GS) cells could also inhibit the replication of SGIV. These results suggest that EcSAA may be an important molecule in the innate immunity of grouper.

  15. Impact of Potato virus Y on long term storage of potato

    Science.gov (United States)

    In recent years, Potato virus Y has reemerged as a serious disease problem in many potato production areas in the northern United States and eastern Canada. In Wisconsin, two widely grown cultivars, Russet Norkotah and Silverton, express mild or no symptoms when infected with PVY. The lack of sympto...

  16. The use of potato and sweet potato starches affects white salted noodle quality

    NARCIS (Netherlands)

    Chen, Z.; Schols, H.A.; Voragen, A.G.J.

    2003-01-01

    Potato and sweet potato starches and derivatives thereof were used to substitute part of the wheat flour in white salted noodle (WSN) manufacture. The quality of the WSN obtained was compared with the quality of WSN made from wheat flour only. When up to 20% of wheat flour was replaced by acetylated

  17. Breeding for improved potato nutrition: High amylose starch potatoes show promise as fiber source

    Science.gov (United States)

    Potato starch is composed of approximately 75% amylopectin and 25% amylose. We are interested in breeding for higher amylose content, which would increase the fiber content of potato and decrease glycemic index. In order to make progress in a breeding program, we have developed a high throughput ass...

  18. Presence of necrotic strains of Potato virus Y in Mexican potatoes

    Directory of Open Access Journals (Sweden)

    Martínez-Soriano Juan

    2009-06-01

    Full Text Available Abstract Correction to Ramírez-Rodríguez VR, Frías-Treviño G, Aviña-Padilla K, Silva-Rosales L, Martínez-Soria JP: Presence of necrotic strains of Potato virus Y in Mexican potatoes. Virology Journal 2009, 6:48

  19. Substituent distribution within cross-linked and hydroxypropylated sweet potato starch and potato starch

    NARCIS (Netherlands)

    Zhao, J.; Schols, H.A.; Chen Zenghong,; Jin Zhengyu,; Buwalda, P.L.; Gruppen, H.

    2012-01-01

    Revealing the substituents distribution within starch can help to understand the changes of starch properties after modification. The distribution of substituents over cross-linked and hydroxypropylated sweet potato starch was investigated and compared with modified potato starch. The starches were

  20. Biotech potatoes in the 21st century: 20 years since the first biotech potato

    Science.gov (United States)

    Potato is the world's most important vegetable crop, with nearly 400 million tons produced worldwide every year, lending to stability in food supply and socioeconomics. In general, potato is an intensively managed crop, requiring irrigation, fertilization, and frequent pesticide applications in orde...

  1. Mercury levels in largemouth bass (Micropterus salmoides) from regulated and unregulated rivers.

    Science.gov (United States)

    Dharampal, Prarthana S; Findlay, Robert H

    2017-03-01

    Within areas of comparable atmospheric mercury deposition rates methylmercury burden in largemouth bass populations vary significantly between regulated and unregulated rivers. To investigate if trophic dynamics strongly influenced pollutant body load, we sampled largemouth bass from two adjacent rivers, one regulated and one unregulated, and applied a suite of biochemical and stable isotope assays to compare their trophic dynamics. Total mercury burden in the bass from the unregulated Sipsey River (Elrod, AL, USA) and the regulated Black Warrior River (Demopolis, AL, USA) averaged 0.87 mg kg(-1) and 0.19 mg kg(-1) wet weight, respectively. For both populations, age, weight, and length were positively correlated with muscle mercury concentration. Compound specific stable isotope analysis of amino acids showed the trophic position of both populations was just under four. Quantitative and isotopic analysis of neutral lipid fatty acid of Sipsey River bass indicated a greater reliance upon the detrital component of the food web compared to Demopolis Reservoir bass which fed within the autochthonous, pelagic component of the food web. Since the close proximity of the rivers makes differences in atmospheric deposition unlikely and both populations had similar trophic position, our findings indicate that food web dynamics should be included among the factors that can strongly influence mercury concentration in fish.

  2. A STUDY ON NEW PRODUCT DEMAND FORECASTING BASED ON BASS DIFFUSION MODEL

    Directory of Open Access Journals (Sweden)

    Zuhaimy Ismail

    2013-01-01

    Full Text Available A forecasting model of new product demand has been developed and applied to forecast new vehicle demand in Malaysia. Since the publication of the Bass model in 1969, innovation of new diffusion theory has sparked considerable research among marketing science scholars, operational researchers and mathematicians. This study considers the Bass Model for forecasting the diffusion of new products or an innovation in the Malaysian society. The objective of the proposed model is to represent the level of spread on new products among a given set of society in terms of a simple mathematical function that elapsed since the introduction of new products. With limited amount of data available for new products, a robust Bass model was developed to forecast the sales volume. A procedure of the proposed diffusion model was designed and the parameters were estimated. Results obtained by applying the proposed model and numerical calculation show that the proposed Bass diffusion model is robust and effective for forecasting demand of new products. This study concludes that the newly developed bass diffusion of demand function has significantly contributed for forecasting the diffusion of new products.

  3. Seasonal use of a New England estuary by foraging contingents of migratory striped bass

    Science.gov (United States)

    Mather, Martha E.; Pautzke, Sarah M.; Finn, John T.; Deegan, Linda A.; Muth, Robert M.

    2011-01-01

    Using acoustic telemetry on migratory striped bass Morone saxatilis in Plum Island Estuary (PIE), Massachusetts, we found that striped bass (335–634 mm total length) tagged in the spring and summer of 2005 (n = 14) and 2006 (n = 46) stayed in the estuary for an average of 66.0 d in 2005 and 72.2 d in 2006. Striped bass spent the most time in two specific reaches: middle Plum Island Sound and lower Rowley River. In both years, three different use-groups of striped bass were observed in PIE. Short-term visitors (n = 24) stayed in the estuary only briefly (range = 5–20 d). Two groups of seasonal residents stayed for more than 30 d, either in the Rowley River (n = 14) or in Plum Island Sound (n = 22). Within PIE, the two seasonal-resident use-groups may be foraging contingents that learn how to feed efficiently in specific parts of the estuary. These distinct within-estuary use patterns could have different implications for striped bass condition and prey impact.

  4. c-Jun N-terminal kinases 3 (JNK3) from orange-spotted grouper, Epinephelus coioides, inhibiting the replication of Singapore grouper iridovirus (SGIV) and SGIV-induced apoptosis.

    Science.gov (United States)

    Guo, Minglan; Wei, Jingguang; Zhou, Yongcan; Qin, Qiwei

    2016-12-01

    C-Jun N-terminal kinases (JNKs), a subgroup of serine-threonine protein kinases that activated by phosphorylation, are involve in physiological and pathophysiological processes. JNK3 is one of JNK proteins involved in JNK3 signaling transduction. In the present study, two JNK3 isoforms, Ec-JNK3 X1 and Ec-JNK3 X2, were cloned from orange-spotted grouper, Epinephelus coioides. Both Ec-JNK3 X1 and Ec-JNK3 X2 were mainly expressed in liver, gill, skin, brain and muscle of juvenile grouper. The relative expression of Ec-JNK3 X2 mRNA was much higher in muscle and gill than that of Ec-JNK3 X1. Isoform-specific immune response to challenges was revealed by the expression profiles in vivo. Immunofluorescence staining indicated that JNK3 was localized in the cytoplasm of grouper spleen (GS) cells and shown immune response to SGIV infection in vitro. Over-expressing Ec-JNK3 X1 and/or Ec-JNK3 X2 inhibited the SGIV infection and replication and the SGIV-induced apoptosis. To achieve the antiviral and anti-apoptosis activities, JNK3 promoted the activation of genes ISRE and type I IFN in the antiviral IFN signaling pathway, and inhibited the activation of transcription factors NF-κB and p53 relating to apoptosis, respectively. Ec-JNK3 X2 showed stronger activities in antivirus and anti-apoptosis than that of Ec-JNK3 X1. Our results not only define the characterization of JNK3 but also reveal new immune functions and the molecular mechanisms of JNK3 on iridoviruses infection and the virus-induced apoptosis.

  5. Swimming muscles power suction feeding in largemouth bass.

    Science.gov (United States)

    Camp, Ariel L; Roberts, Thomas J; Brainerd, Elizabeth L

    2015-07-14

    Most aquatic vertebrates use suction to capture food, relying on rapid expansion of the mouth cavity to accelerate water and food into the mouth. In ray-finned fishes, mouth expansion is both fast and forceful, and therefore requires considerable power. However, the cranial muscles of these fishes are relatively small and may not be able to produce enough power for suction expansion. The axial swimming muscles of these fishes also attach to the feeding apparatus and have the potential to generate mouth expansion. Because of their large size, these axial muscles could contribute substantial power to suction feeding. To determine whether suction feeding is powered primarily by axial muscles, we measured the power required for suction expansion in largemouth bass and compared it to the power capacities of the axial and cranial muscles. Using X-ray reconstruction of moving morphology (XROMM), we generated 3D animations of the mouth skeleton and created a dynamic digital endocast to measure the rate of mouth volume expansion. This time-resolved expansion rate was combined with intraoral pressure recordings to calculate the instantaneous power required for suction feeding. Peak expansion powers for all but the weakest strikes far exceeded the maximum power capacity of the cranial muscles. The axial muscles did not merely contribute but were the primary source of suction expansion power and generated up to 95% of peak expansion power. The recruitment of axial muscle power may have been crucial for the evolution of high-power suction feeding in ray-finned fishes.

  6. US Atlantic coast striped bass: Issues with a recovered population

    Science.gov (United States)

    Hartman, K.J.; Margraf, F.J.

    2003-01-01

    Striped bass, Morone saxatilis (Walbaum), is an anadromous species naturally occurring along the US Atlantic coast, which historically supported valuable commercial and recreational fisheries. In response to a near order-of-magnitude decline in landings, the Atlantic States Marine Fisheries Commission enacted a management plan in 1981 protecting fish until they could spawn at least once. By 1989, recruitment increased in natal rivers and regulations were relaxed, permitting limited fisheries by 1990. By 1995, the stock was declared fully recovered. Since the recovery, concern has increased over the health of the stocks. In the 1990s, fish in poor physical condition with dermal lesions became common in Chesapeake Bay. Pathogens of most concern in cultures from fish include the genus Mycobacterium. Coincident with declines in fish health were changes in diets, declines of preferred prey, and reduced growth and condition. Theories were suggested linking declines in condition to reductions in forage base or pathogens. Diets have changed since the 1950s and while many Chesapeake fish are infected with mycobacteria, it is still not known how or if these factors are linked. The highest priorities for research were considered to be: linking numerous local and regional studies to provide a coast-wide perspective; continuation of investigations linking population health to the prey-base; determination of the cause-effect of mycobacteria infections; and formulation of management options.

  7. Detection of benzo[a]pyrene-induced immunotoxicity in orange spotted grouper (Epinephelus coioides).

    Science.gov (United States)

    Khaniyan, Maryam; Salamat, Negin; Safahieh, Alireza; Movahedinia, Abdolali

    2016-03-01

    This study aimed to investigate the effects of benzo[a]pyrene (BaP) on immune status of orange spotted grouper (Epinephelus coioides). Fish were injected with 2, 20 and 35 mg/kg-bw of BaP and were kept under laboratory conditions for 14 days. Blood samples were taken at days 1, 4, 7, and 14 and changes in total WBC and RBC, phagocytosis, lysozyme activity, lysosomal membrane stability, immunoglobulin M (IgM) level and antibacterial activity were evaluated. Also BaP bioaccumulation in fish muscle was measured. BaP concentration in the muscle of treated fish reached a maximum level after 4 days (P < 0.05). Exposure of fish to BaP resulted in a significant decrease of total RBC and WBC, lysozyme activity, lysosomal membrane stability, IgM level and antibacterial activity after 4 days and phagocytosis after 7 days of the experiment (P < 0.05). Totally, the results revealed BaP ability to suppress the fish immune function.

  8. Dispersal of grouper larvae drives local resource sharing in a coral reef fishery

    KAUST Repository

    Almany, Glenn R.

    2013-04-01

    In many tropical nations, fisheries management requires a community-based approach because small customary marine tenure areas define the spatial scale of management [1]. However, the fate of larvae originating from a community\\'s tenure is unknown, and thus the degree to which a community can expect their management actions to replenish the fisheries within their tenure is unclear [2, 3]. Furthermore, whether and how much larval dispersal links tenure areas can provide a strong basis for cooperative management [4, 5]. Using genetic parentage analysis, we measured larval dispersal from a single, managed spawning aggregation of squaretail coral grouper (Plectropomus areolatus) and determined its contribution to fisheries replenishment within five community tenure areas up to 33 km from the aggregation at Manus Island, Papua New Guinea. Within the community tenure area containing the aggregation, 17%-25% of juveniles were produced by the aggregation. In four adjacent tenure areas, 6%-17% of juveniles were from the aggregation. Larval dispersal kernels predict that 50% of larvae settled within 14 km of the aggregation. These results strongly suggest that both local and cooperative management actions can provide fisheries benefits to communities over small spatial scales. © 2013 Elsevier Ltd.

  9. Dispersal of grouper larvae drives local resource sharing in a coral reef fishery.

    Science.gov (United States)

    Almany, Glenn R; Hamilton, Richard J; Bode, Michael; Matawai, Manuai; Potuku, Tapas; Saenz-Agudelo, Pablo; Planes, Serge; Berumen, Michael L; Rhodes, Kevin L; Thorrold, Simon R; Russ, Garry R; Jones, Geoffrey P

    2013-04-08

    In many tropical nations, fisheries management requires a community-based approach because small customary marine tenure areas define the spatial scale of management [1]. However, the fate of larvae originating from a community's tenure is unknown, and thus the degree to which a community can expect their management actions to replenish the fisheries within their tenure is unclear [2, 3]. Furthermore, whether and how much larval dispersal links tenure areas can provide a strong basis for cooperative management [4, 5]. Using genetic parentage analysis, we measured larval dispersal from a single, managed spawning aggregation of squaretail coral grouper (Plectropomus areolatus) and determined its contribution to fisheries replenishment within five community tenure areas up to 33 km from the aggregation at Manus Island, Papua New Guinea. Within the community tenure area containing the aggregation, 17%-25% of juveniles were produced by the aggregation. In four adjacent tenure areas, 6%-17% of juveniles were from the aggregation. Larval dispersal kernels predict that 50% of larvae settled within 14 km of the aggregation. These results strongly suggest that both local and cooperative management actions can provide fisheries benefits to communities over small spatial scales.

  10. MS2Grouper: Group Assessment and Synthetic Replacement of Duplicate Proteomic Tandem Mass Spectra

    Energy Technology Data Exchange (ETDEWEB)

    Tabb, Dave L [ORNL; Thompson, Melissa R [ORNL; Khalsa-Moyers, Gurusahai K [ORNL; Verberkmoes, Nathan C [ORNL; McDonald, W Hayes [ORNL

    2005-01-01

    Shotgun proteomics experiments require the collection of thousands of tandem mass spectra; these sets of data will continue to grow as new instruments become available that can scan at even higher rates. Such data contain substantial amounts of redundancy with spectra from a particular peptide being acquired many times during a single LC-MS/MS experiment. In this article, we present MS2Grouper, an algorithm that detects spectral duplication, assesses groups of related spectra, and replaces these groups with synthetic representative spectra. Errors in detecting spectral similarity are corrected using a paraclique criterion -- spectra are only assessed as groups if they are part of a clique of at least three completely interrelated spectra or are subsequently added to such cliques by being similar to all but one of the clique members. A greedy algorithm constructs a representative spectrum for each group by iteratively removing the tallest peaks from the spectral collection and matching to peaks in the other spectra. This strategy is shown to be effective in reducing spectral counts by up to 20% in LC-MS/MS datasets from protein standard mixtures and proteomes, reducing database search times without a concomitant reduction in identified peptides.

  11. Population structure and dynamics of northern pike and smallmouth bass in Coeur d’Alene Lake, Idaho.

    Science.gov (United States)

    Walrath, John D.; Quist, Michael; Firehammer, Jon A.

    2015-01-01

    Numerous species have been introduced to Coeur d'Alene Lake, Idaho over the last century, but minimal research has been completed to understand their population dynamics. The objective of this study was to describe the population demographics and dynamics of northern pike (Esox lucius) and smallmouth bass (Micropterus dolomieu), two important nonnative sport fishes in the system to provide information that will assist with guiding management decisions. The oldest northern pike was age 7 and the oldest smallmouth bass was age 11. Populations of both species exhibited very stable recruitment with a recruitment coefficient of determination of 0.99 for northern pike and 0.98 for smallmouth bass. Total annual mortality was estimated as 66% for northern pike and 42% for smallmouth bass. Growth of northern pike in Coeur d'Alene Lake was comparable to the 50–75th percentiles of growth exhibited by lentic northern pike populations across North America. Northern pike in Coeur d'Alene Lake were most similar to populations in the north-central and northeast United States with fast growth rates and short life spans. In contrast, smallmouth bass grew slowly and generally fell within the 5th percentile of lentic smallmouth bass populations in North America. Smallmouth bass in Coeur d'Alene Lake were similar to other populations in northern regions of the United States displaying slow growth rates with high longevity. Results of this study provide important insight on nonnative northern pike and smallmouth bass population dynamics.

  12. Production of recombinant orange-spotted grouper (Epinephelus coioides) follicle-stimulating hormone (FSH) in single-chain form and dimer form by Pichia pastoris and their biological activities.

    Science.gov (United States)

    Chen, Jun; Zhang, Yanhong; Tang, Zhiguo; Mao, Jiewei; Kuang, Zhonglei; Qin, Chaobin; Li, Wensheng

    2012-09-01

    FSH is a key regulator of steroidogenesis and gonadal growth in teleosts. However, function of FSH is elusive in grouper due to the lack of purified and native FSH. In the present study, we reported production of bioactive orange-spotted grouper (Epinephelus coioides) FSH in dimer form and single-chain form by Pichia pastoris. Dimer form of recombinant grouper FSH (rgFSHba) was accomplished by co-expressing mature FSHb-subunit and a-subunit genes. Fusion of mature FSHb-subunit and a-subunit genes together linking with a polypeptide (4×(Gly-Ser)-Gly-Thr) gene generated single-chain form of recombinant grouper FSH (rgFSHb-a). Recombinant grouper common α-subunit (rgCga) and FSHb-subunit (rgFSHb) were also separately produced. Recombinant proteins were verified by Western blot and mass spectrometry assays, and characterized by deglycosylation analysis. Deglycosylation assay suggested that glycosylation of recombinant FSH mainly occurred on common a-subunit. Bioactivities of recombinant proteins were initially evaluated by activating grouper FSH receptor, and further demonstrated by incubating ovarian fragments of adult grouper and intraperitoneal injection in juvenile female grouper. Two forms of recombinant FSH presented similar biological activities of activating FSH receptor and stimulating in vitro testosterone (T) and estradiol-17β (E2) secretion, though the dimer form functioned slightly weaker than the single-chain form. However, injections of rgFSHb-a or rgFSHba could significantly increase serum T and E2 levels, induce early ovarian development, reduce hypothalamic gnrh1 mRNA level, and increase hypothalamic cyp19a1b mRNA level. Data in this study suggested that recombinant gonadotropin could be produced in dimer form or single-chain form by P. pastoris, and FSH could regulate steroidogenesis and early ovarian development in juvenile grouper.

  13. Natural diversity of potato (Solanum tuberosum) invertases

    Science.gov (United States)

    2010-01-01

    Background Invertases are ubiquitous enzymes that irreversibly cleave sucrose into fructose and glucose. Plant invertases play important roles in carbohydrate metabolism, plant development, and biotic and abiotic stress responses. In potato (Solanum tuberosum), invertases are involved in 'cold-induced sweetening' of tubers, an adaptive response to cold stress, which negatively affects the quality of potato chips and French fries. Linkage and association studies have identified quantitative trait loci (QTL) for tuber sugar content and chip quality that colocalize with three independent potato invertase loci, which together encode five invertase genes. The role of natural allelic variation of these genes in controlling the variation of tuber sugar content in different genotypes is unknown. Results For functional studies on natural variants of five potato invertase genes we cloned and sequenced 193 full-length cDNAs from six heterozygous individuals (three tetraploid and three diploid). Eleven, thirteen, ten, twelve and nine different cDNA alleles were obtained for the genes Pain-1, InvGE, InvGF, InvCD141 and InvCD111, respectively. Allelic cDNA sequences differed from each other by 4 to 9%, and most were genotype specific. Additional variation was identified by single nucleotide polymorphism (SNP) analysis in an association-mapping population of 219 tetraploid individuals. Haplotype modeling revealed two to three major haplotypes besides a larger number of minor frequency haplotypes. cDNA alleles associated with chip quality, tuber starch content and starch yield were identified. Conclusions Very high natural allelic variation was uncovered in a set of five potato invertase genes. This variability is a consequence of the cultivated potato's reproductive biology. Some of the structural variation found might underlie functional variation that influences important agronomic traits such as tuber sugar content. The associations found between specific invertase alleles and

  14. Agronomic performance of locally adapted sweet potato (Ipomoea ...

    African Journals Online (AJOL)

    SERVER

    limited fertility and inadequate moisture (Bioethics, 2004). Despite sweet potato having a high ... the susceptibility of sweet potato to virus diseases which has caused substantial yield reduction of up to 80%. (Karyeija et al., 2000; Odame et al., ...

  15. Challenges and opportunities for quality seed potato availability and ...

    African Journals Online (AJOL)

    ACSS

    varieties, poor management practices and lack of quality seed potatoes ... potato production technologies, positive selected seed (PSS) seemed to have the ... of major economic importance worldwide ... it is the third most important food crop.

  16. A review of therapeutic potentials of sweet potato: Pharmacological ...

    African Journals Online (AJOL)

    of a plant may inherently differ in their nutritional .... the skin of sweet potato root tubers are also rich source of ..... Diabetes Care. 2004; 27: 436- .... Evid Based Complement. Alternat Med ... potato in the presence of food preservatives. Food Sci.

  17. Changes provoked by boiling, steaming and sous-vide cooking in the lipid and volatile profile of European sea bass.

    Science.gov (United States)

    Nieva-Echevarría, Bárbara; Manzanos, María J; Goicoechea, Encarnación; Guillén, María D

    2017-09-01

    This study aims to shed light on the changes provoked by boiling, steaming and sous-vide cooking on the lipids and volatile profile of farmed and wild European sea bass meat. None of the cooking techniques provoked changes due to hydrolytic or oxidation processes detectable by (1)H NMR on sea bass lipids. The lipid profile of main and minor lipidic components was maintained after cooking. However, study by SPME-GC/MS evidenced that steaming and sous-vide cooking modified the volatile profile of sea bass meat, especially in farmed specimens. The compounds generated came from the occurrence, to a very small extent, of lipid and protein degradation. By contrast, boiling scarcely modified the initial characteristics of raw sea bass. Thus, from a sensory point of view and considering the odour-active compounds generated, steaming and sous-vide cooking provoked more noticeable changes than boiling, especially in farmed sea bass meat. Copyright © 2017. Published by Elsevier Ltd.

  18. Molecular characterization and expression analysis of four isotypes of immunoglobulin light chain genes in orange-spotted grouper, Epinephelus coioides.

    Science.gov (United States)

    Wu, Ming-Shan; Cheng, Chao-An; Lin, Chih-Hung; Lee, Chiou-Yueh; Tseng, Shih-Jou; Tzeng, Chyng-Shyan; Chang, Chi-Yao

    2013-03-01

    To date, many immunoglobulin (Ig) genes have been identified in diverse teleost species, but the contributions of different types of light chain (IgL) to the immune response remain unclear. Screening of a stimulated kidney cDNA library from orange-spotted grouper (Osg, Epinephelus coioides) resulted in the identification of 26 full Ig light chain (OsgIgL) coding sequences. These 26 OsgIgLs encoded peptides from 235 to 248 amino acid residues and could be grouped into five variable (V(L)) and four constant (C(L)) isotypes. The C(L) regions contained three conserved cysteine residues that may participate in intra- or inter-chain disulfide bond formation. The four C(L) isotypes could be sub-grouped into two serological types: κ (C(L)-I, C(L)-II and C(L)-III) and σ (C(L)-IV), by phylogenetic analysis. The OsgIgL genes were found to be expressed in various tissues, with greatest levels of expression observed in the head-kidney and spleen. The major expression type was C(L)-I, which comprised 92% and 91% of total OsgIgL gene expression in the head-kidney and spleen, respectively. Transcription of all four C(L) isotypes was differentially affected in response to various immunostimulators, including lipopolysaccharide (LPS), poly I:C and grouper iridovirus (GIV). Induction of OsgIgL genes in response to immunostimulators was particularly dramatic in the spleen, suggesting this organ holds particular importance for the regulation of OsgIgL expression. Furthermore, vaccination of grouper with formalin-inactivated GIV also induced differential patterns of expression in all four OsgIgL isotypes. In summary, the significant and diverse patterns of transcriptional induction observed for OsgIgL isotypes in the spleen and head-kidney imply that each isotype may have unique roles in the immune response.

  19. Orange-spotted grouper (Epinephelus coioides) toll-like receptor 22: molecular characterization, expression pattern and pertinent signaling pathways.

    Science.gov (United States)

    Ding, Xu; Lu, Dan-qi; Hou, Qing-hua; Li, Shui-sheng; Liu, Xiao-chun; Zhang, Yong; Lin, Hao-ran

    2012-09-01

    The toll-like receptors (TLRs) are an important gene family in host innate immunologic surveillance. The TLR22 gene is an essential member of the TLRs that is only found in aquatic animals and has been detected in some bony fish. Here, a TLR22 homolog, EcTLR22, was characterized in the orange-spotted grouper (Epinephelus coioides) via homology cloning. The 3321 bp full-length cDNA sequence of EcTLR22 was obtained, which included an open reading frame of 2880 bp encoding a putative peptide of 960 amino acids containing three highly typical domains with the characteristics of TLR family members. The deduced amino acid sequence of EcTLR22 showed a relatively high similarity to flounder TLR22. Phylogenetic analysis showed that the orange-spotted grouper TLR22 sequence was clustered with those of Perciforme, such as flounder and croaker. Real-time quantitative PCR analysis revealed broad expression of EcTLR22, with relatively high expression detected in the head kidney, trunk kidney, spleen, peripheral blood leukocytes (PBLs) and heart of orange-spotted grouper. After injection with Vibrio alginolyticus, there was significant up-regulation of the expression of EcTLR22 in the spleen. In evaluating unstimulated/stimulated head kidney leukocytes and spleen leukocytes, a significant increase in EcTLR22 mRNA expression was detected, which implied a sensitive immune response. Furthermore, four important molecules for signal transduction, MyD88, TRIF, TNF-α and IRF3, were chosen to analyze the role of the EcTLR22 signaling pathway in anti-pathogen responses. Upon LPS or Poly I:C challenge, expression of the four genes was induced, with an increasing tendency detected in head kidney leukocytes, suggesting that the four genes might work with EcTLR22 in host defense against pathogenic microbes.

  20. Polymorphisms of Leptin-b Gene Associated with Growth Traits in Orange-Spotted Grouper (Epinephelus coioides

    Directory of Open Access Journals (Sweden)

    Hai Huang

    2014-07-01

    Full Text Available In mammals, leptin has been demonstrated to perform important roles in many physiological activities and to influence development, growth, metabolism and reproduction. However, in fish, its function is still unclear. Duplicate leptin genes, leptin-a and leptin-b, have been identified in the orange-spotted grouper. In the present study, the polymorphisms in the leptin-b gene of the orange-spotted grouper were detected, and the relation between these polymorphisms and 12 growth traits were analyzed. Six polymorphisms (including 3 single nucleotide polymorphisms (c.14G>A, c.93A>G, c.149G>A in exon 1, 2 SNPs (c.181A>G, c.193G>A in intron 1, and 1 SNP (c.360C>T in exon 2 were identified and genotyped from 200 different individuals. The results revealed that the SNP c.149G>A was significantly associated with growth traits, that the heterozygous mutation genotype GA having negative effects on growth traits. However, the other five SNPs (c.14G>A, c.93A>G, c.181A>G, c.193G>A, c.360C>T did not show significant associations with all the growth traits. Compared with our findings in leptin-a gene, the results suggested that the leptin-a hormone has more important physiological effects in fish bodies than the leptin-b type. Moreover, leptin genes were supposed to be one class of major candidate genes of regulating growth traits in the orange-spotted grouper.

  1. Polymorphisms of leptin-b gene associated with growth traits in orange-spotted grouper (Epinephelus coioides).

    Science.gov (United States)

    Huang, Hai; Wei, Yun; Meng, Zining; Zhang, Yong; Liu, Xiaochun; Guo, Liang; Luo, Jian; Chen, Guohua; Lin, Haoran

    2014-07-07

    In mammals, leptin has been demonstrated to perform important roles in many physiological activities and to influence development, growth, metabolism and reproduction. However, in fish, its function is still unclear. Duplicate leptin genes, leptin-a and leptin-b, have been identified in the orange-spotted grouper. In the present study, the polymorphisms in the leptin-b gene of the orange-spotted grouper were detected, and the relation between these polymorphisms and 12 growth traits were analyzed. Six polymorphisms (including 3 single nucleotide polymorphisms (c.14G>A, c.93A>G, c.149G>A) in exon 1, 2 SNPs (c.181A>G, c.193G>A) in intron 1, and 1 SNP (c.360C>T) in exon 2) were identified and genotyped from 200 different individuals. The results revealed that the SNP c.149G>A was significantly associated with growth traits, that the heterozygous mutation genotype GA having negative effects on growth traits. However, the other five SNPs (c.14G>A, c.93A>G, c.181A>G, c.193G>A, c.360C>T) did not show significant associations with all the growth traits. Compared with our findings in leptin-a gene, the results suggested that the leptin-a hormone has more important physiological effects in fish bodies than the leptin-b type. Moreover, leptin genes were supposed to be one class of major candidate genes of regulating growth traits in the orange-spotted grouper.

  2. 77 FR 72991 - Fisheries of the Caribbean, Gulf of Mexico, and South Atlantic; Snapper-Grouper Fishery Off the...

    Science.gov (United States)

    2012-12-07

    ... Amendment 18A and the Resubmittal may be obtained from the Southeast Regional Office Web site at http://sero... the identification tags for black sea bass pots. Endorsement holders order identification tags through NMFS and a supplier issues the identification tags. Endorsement holders must apply for new tags...

  3. 76 FR 34892 - Fisheries of the Caribbean, Gulf of Mexico, and South Atlantic; Snapper-Grouper Fishery of the...

    Science.gov (United States)

    2011-06-15

    ... classes of spawning fish resulting in a spawning potential ratio equal to 25.8 percent. The Council did... limit at 5-fish per person per day. This bag limit is projected to slow the rate of recreational harvest... management measure that would have implemented split season quotas for commercial black sea bass because...

  4. 76 FR 63563 - Snapper-Grouper Fishery of the South Atlantic; Closure of the 2011-2012 Recreational Sector for...

    Science.gov (United States)

    2011-10-13

    .... lat., the latitude of Cape Hatteras Light, North Carolina. NMFS has determined that the recreational... 35[deg]15.19' N. lat., the latitude of Cape Hatteras Light, North Carolina, south. From Cape Hatteras Light, North Carolina, through Maine, black sea bass are managed jointly by the Mid-Atlantic...

  5. 77 FR 27374 - Fisheries of the Caribbean, Gulf of Mexico, and South Atlantic; Snapper-Grouper Fishery Off the...

    Science.gov (United States)

    2012-05-10

    ...-mingled with sand, mud, or shell hash bottom where they live in burrows. In addition, the majority of... gag, vermilion snapper, and red porgy inshore of 240 ft (73 m). Based on this information, at its... to species occurring closer to shore such as black sea bass, gag, red snapper, red porgy,...

  6. 77 FR 55448 - Fisheries of the Caribbean, Gulf of Mexico, and South Atlantic; Snapper-Grouper Fishery off the...

    Science.gov (United States)

    2012-09-10

    ..., implemented through final rulemaking on July 1, 2012, (77 FR 32408, June 1, 2012), includes a provision to... identification tags for black sea bass pots. In the final rule for Amendment 18A (77 FR 32408, June 1, 2012), the... Ecosystem-Based Amendment 2 for the South Atlantic (76 FR 82183, December 30, 2011). That rule...

  7. DIET AND REPRODUCTION OF LARGEMOUTH BASS IN A RECENTLY INTRODUCED POPULATION, LAKE BRACCIANO (CENTRAL ITALY

    Directory of Open Access Journals (Sweden)

    MARINELLI A.

    2007-04-01

    Full Text Available This paper concerns a study of some aspects of largemouth bass ecology in an Italian lake (Lake Bracciano. We assessed the success and possible impact of its recent introduction (1998 upon the fish community. From October 2001 to September 2002, 162 individuals were caught, measured, aged and submitted to biopsy (stomach and gonads were removed. Four age classes, from 0 + to 3 +, were observed in the population. Largemouth bass feeding activity was high in June, mostly eating fish (55.7%, crustaceans (in particular Palaemonetes antennarius, 37.5%, insects (4.5% and molluscs (2.3%. The G.S.I. values showed an autumnal breeding period (from December to February rather than the spring-summer one frequently described in North America. Moreover, bass attained sexual maturity during the second year of life (1 +. These differences could be related to its recent introduction and the apparent success could represent a problem for other species in the Lake.

  8. Hierarchical Bass model: a product diffusion model considering a diversity of sensitivity to fashion

    Science.gov (United States)

    Tashiro, Tohru

    2016-11-01

    We propose a new product diffusion model including the number of how many adopters or advertisements a non-adopter met until he/she adopts the product, where (non-)adopters mean people (not) possessing it. By this effect not considered in the Bass model, we can depict a diversity of sensitivity to fashion. As an application, we utilize the model to fit the iPod and the iPhone unit sales data, and so the better agreement is obtained than the Bass model for the iPod data. We also present a new method to estimate the number of advertisements in a society from fitting parameters of the Bass model and this new model.

  9. Is high pressure treatment able to modify the allergenicity of the largemouth bass allergens?

    Science.gov (United States)

    Liu, Chu-Yi; Tao, Sha; Liu, Rong; Chen, Fu-Sheng; Xue, Wen-Tong

    2012-12-01

    The aim of this paper is to study the influence of high pressure treatment on the structural changes and allergenicity of largemouth bass. We treated the allergens at 100, 200, 300 and 400 MPa for 15 min and at 300 MPa for 5, 10, 15, 20 and 30 min at 20 °C. The treated samples from largemouth bass were tested for their IgE-binding properties by combining Sodium dodecyl sulfate-Polyacrylamide gel electrophoresis (SDS-PAGE) with western blotting (WB) and enzyme-linked immunosorbent assay (ELISA). Circular dichroism analysis was performed to characterize the structural change. In summary, we can determine that the greatest structure changes were found for samples treated by 400 MPa for 15 min. High pressure treatment did change the structure, subunit composition and molecular weight of largemouth bass allergens, but it did not change the allergenicity of the allergens.

  10. Saul Bass et Alfred Hitchcock : trois mariages et un enterrement

    OpenAIRE

    2012-01-01

    Alfred Hitchcock n’a collaboré avec le fameux créateur de génériques Saul Bass que pour trois films seulement, mais cette brève association marque un sommet incontesté de l’art du générique. Après avoir étudié la contribution de Bass aux génériques de Vertigo (1958) et de North by Northwest (1959), l’article examine en détail le cas de Psycho (1960) et particulièrement la polémique concernant la possible responsabilité de Bass dans les scènes essentielles du meurtre sous la douche et de la mo...

  11. Identification and characterization of three TLR1 subfamily members from the orange-spotted grouper, Epinephelus coioides.

    Science.gov (United States)

    Li, Yan-Wei; Xu, Dong-Dong; Li, Xia; Mo, Ze-Quan; Luo, Xiao-Chun; Li, An-Xing; Dan, Xue-Ming

    2016-08-01

    Toll-like receptors (TLRs), which play important roles in host defense against pathogen infection, are the most intensively studied pattern recognition receptors (PRRs). In this study, we identified three novel TLR1 subfamily members, including TLR1 (EcTLR1b), TLR2 (EcTLR2b) and TLR14 (EcTLR14), from the orange-spotted grouper (Epinephelus coioides). EcTLR1b and EcTLR2b displayed low sequence identity with the previously reported grouper TLR1 (EcTLR1a) and TLR2 (EcTLR2a), respectively. The open reading frames (ORFs) of EcTLR1b, EcTLR2b and EcTLR14 contain 2484 bp, 2394 bp and 2640 bp, which encode the corresponding 827 amino acids (aa), 797 aa and 879 aa, respectively. All three TLRs have leucine-rich repeat (LRR) domains (including an LRR-NT (except for EcTLR1b), several LRR motifs and an LRR-CT), a trans-membrane region and a Toll/interleukin-1 receptor (TIR) domain. The TIR domains of the three TLRs exhibited conserved boxes, namely box1, box2 and box3, and their 3D models were similar to those of human TLR1 or TLR2. Sequence alignment demonstrated that the TIR domains of the three TLRs shared higher sequence identity with those of other species than the full-length receptors. Phylogenetic analysis indicated that EcTLR1s and EcTLR2s are characterized by their differing evolutionary status, whereas EcTLR14 was found to be in the same group as other piscine TLR14/18s. The three TLRs were ubiquitously expressed in seven tested tissues of healthy groupers, although their expression profiles were different. Post Cryptocaryon irritans infection, TLR1s expression was up-regulated in the gills. The expression of TLR2b was mainly increased in the spleen, but decreased in the gills, which was similar to the expression pattern of TLR2a post C. irritans infection. Unlike EcTLR1b and EcTLR2b, however, the grouper TLR14 transcript was substantially induced in both tissues post challenge. These findings may be helpful in understanding the innate immune mechanism of host

  12. Molecular cloning and characterization of two types of IκBα orthologues in orange-spotted grouper, Epinephelus coioides.

    Science.gov (United States)

    Gao, Ren; Huang, Youhua; Huang, Xiaohong; Guan, Liya; Wei, Shina; Zhou, Yongcan; Qin, Qiwei

    2014-05-01

    Inhibitors of kappa B (IκBs) are the members of primary regulators of NF-κB, which can inhibit NF-κB activity by blocking the NF-κB in an inactive state in the cytoplasm. In this study, two types of IκBα orthologues (EcIκBαA and EcIκBαB) from orange-spotted grouper, Epinephelus coioides, were cloned and characterized. EcIκBαA and EcIκBαB encoded putative proteins containing 308 and 318 amino acids, which shared 59% and 53% identity to IκBαA and IκBαB of Danio rerio, respectively. Amino acid sequence alignment showed that both EcIκBαA and EcIκBαB contained a conserved degradation motif DSGLDS in the N-terminal region and a PEST sequence in the C-terminal region. In addition, EcIκBαA and EcIκBαB contained 5 and 6 ankyrin repeats, respectively. The genomic DNA of EcIκBαA and EcIκBαB consisted of 6 exons and 5 introns. Both of their transcripts were widely distributed in different tissues, and the expression levels were different in response to various stimuli, including lipopolysaccharide (LPS), Vibrio alginolyticus and Singapore grouper iridovirus (SGIV). Dual-luciferase reporter assay suggested that both EcIκBαA and EcIκBαB were able to inhibit Ecc-Rel and Ecp65 induced NF-κB promoter activity in grouper spleen (GS) cells. Subcellular localization analysis showed that EcIκBαB was present predominantly in the cytoplasm, while EcIκBαA was distributed throughout both the nucleus and the cytoplasm. Furthermore, overexpression of EcIκBαA and EcIκBαB in GS cells inhibited the viral gene transcriptions of MCP, ORF019 and ORF162 of SGIV. Taken together, our findings suggested that both EcIκBαA and EcIκBαB were involved in grouper innate immunity against virus.

  13. Hooking mortality and physiological responses of striped bass angled in freshwater and held in live-release tubes

    Science.gov (United States)

    Bettinger, J.M.; Tomasso, J.R.; Isely, J.J.

    2005-01-01

    Mortality and physiological responses of adult striped bass Morone saxatilis angled from Lake Murray, South Carolina, and held in live-release tubes were evaluated during the spring and summer of 2003. To estimate mortality, we attached external ultrasonic transmitters to 59 striped bass (mean total length [TL] = 585 mm). Striped bass were caught with angling gear, tagged, and immediately released or held in live-release tubes for 2, 4, or 6 h prior to release. No mortality of striped bass was observed during spring. Overall mortality during summer was 83%. Mortality of summer-caught striped bass was not related to tube residence time, fish TL, depth of capture, or surface water temperature. To characterize physiological stress, we measured the plasma cortisol, glucose, lactate, and osmolality levels of 62 additional striped bass (mean TL = 563 mm) that were angled and immediately released or angled and held in live-release tubes. Plasma cortisol, glucose, lactate, and osmolality were positively related to tube residence time. When the hematological characteristics were considered only in relation to tube residence time, responses indicative of physiological stress continued for about 150 min, after which blood chemistry began to return to normal. Live-release tubes appear to be useful for keeping striped bass alive when they are angled from cool water, but they are not effective for striped bass angled from warm water. The high summer mortality of striped bass suggests a need for restrictive fishing regulations during the summer for the Lake Murray striped bass fishery. ?? Copyright by the American Fisheries Society 2005.

  14. Native protein recovery from potato fruit juice by ultrafiltration

    NARCIS (Netherlands)

    Zwijnenberg, Harmen Jan; Kemperman, Antonius J.B.; Boerrigter, M.E.; Lotz, Martin; Dijksterhuis, Jan F.; Koops, G.H.; Poulsen, Poul Emil

    2002-01-01

    Potato fruit juice, i.e. the stream resulting after the extraction of the starch from the potato, contains up to 2.5% [w/w] of proteins that are potentially valuable for the food market. However, today the recovery of protein from the potato fruit juice with reverse osmosis membranes results in a

  15. Amylose content decreases during tuber development in potato

    Science.gov (United States)

    Potato starch is composed of amylopectin and amylose in an approximately three to one ratio. Amylose is considered to be nutritionally desirable, so there is interest in finding strategies to increase the amylose content of potatoes. There is also interest in marketing “baby” potatoes, which are har...

  16. 7 CFR 948.51 - Colorado Potato Committee.

    Science.gov (United States)

    2010-01-01

    ... 7 Agriculture 8 2010-01-01 2010-01-01 false Colorado Potato Committee. 948.51 Section 948.51... Order Regulating Handling Committees § 948.51 Colorado Potato Committee. The Colorado Potato Committee... selected from each area committee. Committeemen shall be selected by the Secretary from nominations of...

  17. A serological approach to the identification of potato cyst nematodes.

    NARCIS (Netherlands)

    Schots, A.

    1988-01-01

    The potato cyst nematode species G.rostochiensis and G.pallida are a threat to the cultivation of potatoes. Their presence in the soil embodies a potential financial loss to the farmer either because of harvest reduction, or because of rejection of seed potatoes, and othe

  18. Development of late blight resistant potatoes by cisgenic stacking

    NARCIS (Netherlands)

    Jo, K.R.; Kim, C.J.; Kim, S.J.; Kim, T.J.; Bergervoet-van Deelen, J.E.M.; Jongsma, M.A.; Visser, R.G.F.; Jacobsen, E.; Vossen, J.H.

    2014-01-01

    Background Phytophthora infestans, causing late blight in potato, remains one of the most devastating pathogens in potato production and late blight resistance is a top priority in potato breeding. The introduction of multiple resistance (R) genes with different spectra from crossable species into

  19. Physico-chemical and functional properties of potato proteins.

    NARCIS (Netherlands)

    Koningsveld, van G.

    2001-01-01

    Key words: potato proteins, patatin, protease inhibitors, solubility, structure, pH, temperature, ethanol, ionic strength, phenolic compounds, foams, emulsionsIn potato starch manufacture an aqueous byproduct remains that is called potato fruit juice (PFJ). On a dry matter basis PFJ

  20. Tuber formation in the wild potato species Solanum demissum Lindl.

    NARCIS (Netherlands)

    Helder, J.

    1994-01-01

    1. How does a potato plant form tubers?Potato plants produce sexual multiplication and survival structures, true seeds, and asexual multiplication and survival bodies, tubers. Berries of the potato plant contain a large number of minute seeds. Relatively large tubers are formed in t

  1. 7 CFR 1207.514 - Exemption for organic potatoes.

    Science.gov (United States)

    2010-01-01

    ... 7 Agriculture 10 2010-01-01 2010-01-01 false Exemption for organic potatoes. 1207.514 Section 1207... SERVICE (MARKETING AGREEMENTS AND ORDERS; MISCELLANEOUS COMMODITIES), DEPARTMENT OF AGRICULTURE POTATO RESEARCH AND PROMOTION PLAN Rules and Regulations Assessments § 1207.514 Exemption for organic potatoes. (a...

  2. 76 FR 16323 - Irish Potatoes Grown in Washington; Continuance Referendum

    Science.gov (United States)

    2011-03-23

    ... Agricultural Marketing Service 7 CFR Part 946 Irish Potatoes Grown in Washington; Continuance Referendum AGENCY... referendum be conducted among eligible Washington potato growers to determine whether they favor continuance of the marketing order regulating the handling of Irish potatoes grown in Washington. DATES: The...

  3. 76 FR 31787 - United States Standards for Grades of Potatoes

    Science.gov (United States)

    2011-06-02

    ... Agricultural Marketing Service 7 CFR Part 51 United States Standards for Grades of Potatoes AGENCY... Standards for Grades of Potatoes. These standards are issued under the Agricultural Marketing Act of 1946... to allow mixed colors and/ or types of potatoes when designated as a mixed or specialty pack...

  4. Potato psyllid vector of zebra chip disease in Pacific Northwest

    Science.gov (United States)

    Zebra chip is a destructive disease of potatoes in the Pacific Northwest and other potato production regions of North America. The pathogen associated with this disease is transmitted by the potato psyllid. A team of researchers which included a scientist at the ARS in Wapato, WA updated an extens...

  5. Increasing genetic gain by reducing ploidy in potato

    Science.gov (United States)

    While potato cultivars in major world production regions are tetraploid, wild and cultivated potatoes in the crop’s center of origin range from diploid to hexaploid. Landrace potato varieties cannot be distinguished based on ploidy. Contrary to popular belief, tetraploidy does not appear to be neces...

  6. Acrylamide diminishing in potato chips by using commercial Asparaginase

    DEFF Research Database (Denmark)

    Pedreschi, Franco; Mariotti, Salomé; Granby, Kit

    2011-01-01

    of potato chips. Control and asparaginase treated potato slices (Verdi variety, diameter: 40 mm, width: 2.0 mm) were fried at 170 °C for 5 min. Potato slices were treated in one of the following ways: (i) Rinsing in distilled water (control A); (ii) Blanching in hot water at 85 °C for 3.5 min (control B...

  7. Acrylamide Mitigation in Potato Chips by Using NaCl

    DEFF Research Database (Denmark)

    Pedreschi, Franco; Granby, Kit; Risum, Jørgen

    2010-01-01

    slices in a NaCl solution over the acrylamide formation in the resultant potato chips. Potato slices (Verdi variety, diameter 40 mm, width 2.0 mm) were fried at 170 °C for 5 min (final moisture content of ∼2.0%). Prior to frying, the potato slices were treated in one of the following ways: (1) control...

  8. Cloning and expression of transaldolase from potato.

    Science.gov (United States)

    Moehs, C P; Allen, P V; Friedman, M; Belknap, W R

    1996-11-01

    We have isolated a cDNA encoding transaldolase, an enzyme of the pentose-phosphate pathway, from potato (Solanum tuberosum). The 1.5 kb cDNA encodes a protein of 438 amino acid residues with a molecular mass of 47.8 kDa. When the potato cDNA was expressed in Escherichia coli a 45 kDa protein with transaldolase activity was produced. The first 62 amino acids of the deduced amino acid sequence represent an apparent plastid transit sequence. While the potato transaldolase has considerable similarity to the enzyme from cyanobacteria and Mycobacterium leprae, similarity to the conserved transaldolase enzymes from humans, E. coli and Saccharomyces cerevisiae is more limited. Northern analysis indicated that the transaldolase mRNA accumulated in tubers in response to wounding. Probing the RNA from various potato tissues indicated that the transaldolase mRNA accumulation to higher levels in the stem of mature potato plants than in either leaves or tubers. These data are consistent with a role for this enzyme in lignin biosynthesis.

  9. Memristors: Memory elements in potato tubers.

    Science.gov (United States)

    Volkov, Alexander G; Nyasani, Eunice K; Blockmon, Avery L; Volkova, Maya I

    2015-01-01

    A memristor is a nonlinear element because its current-voltage characteristic is similar to that of a Lissajous pattern for nonlinear systems. This element was postulated recently and researchers are looking for it in different biosystems. We investigated electrical circuitry of red Irish potato tubers (Solanum tuberosum L.). The goal was to discover if potato tubers might have a new electrical component - a resistor with memory. The analysis was based on a cyclic current-voltage characteristic where the resistor with memory should manifest itself. We found that the electrostimulation by bipolar sinusoidal or triangle periodic waves induces electrical responses in the potato tubers with fingerprints of memristors. Tetraethylammonium chloride, an inhibitor of voltage gated K(+) channels, transforms a memristor to a resistor in potato tubers. Our results demonstrate that a voltage gated K(+) channel in the excitable tissue of potato tubers has properties of a memristor. Uncoupler carbonylcyanide-4-trifluoromethoxy-phenyl hydrazone decreases the amplitude of electrical responses at low and high frequencies of bipolar periodic sinusoidal or triangle electrostimulating waves. The discovery of memristors in plants creates a new direction in the understanding of electrical phenomena in plants.

  10. Production of bio ethanol from waste potatoes

    Science.gov (United States)

    Jaber Noufal, Mohamad; Li, Baizhan; Maalla, Zena Ali

    2017-03-01

    In this research, production of ethanol from waste potatoes fermentation was studied using Saccharomyces cerevisiae. Potato Flour prepared from potato tubers after cooking and drying at 85°C. A homogenous slurry of potato flour prepared in water at solid-liquid ratio 1:10. Liquefaction of potato starch slurry was done with α-amylase at 80°C for 40 min followed by saccharification process which was done with glucoamylase at 65°C for two hr. Fermentation of hydrolysate with Saccharomyces cerevisiae at 35°C for two days resulted in the production of 33 g/l ethanol. The following parameters have been analysed: temperature, time of fermentation and pH. It found that Saccharification process is affected by enzyme Amylase 300 concentration and concentration of 1000μl/100ml gives the efficient effect of the process. The best temperature for fermentation process was found to be about 35°C. Also, it noticed that ethanol production increased as a time of fermentation increased but after 48 hr further growth in fermentation time did not have an appreciable effect. Finally, the optimal value of pH for fermentation process was about 5 to 6.

  11. Combining telephone surveys and fishing catches self-report: the French sea bass recreational fishery assessment.

    Directory of Open Access Journals (Sweden)

    Delphine Rocklin

    Full Text Available Fisheries statistics are known to be underestimated, since they are mainly based on information about commercial fisheries. However, various types of fishing activities exist and evaluating them is necessary for implementing effective management plans. This paper assesses the characteristics and catches of the French European sea bass recreational fishery along the Atlantic coasts, through the combination of large-scale telephone surveys and fishing diaries study. Our results demonstrated that half of the total catches (mainly small fish were released at sea and that the mean length of a kept sea bass was 46.6 cm. We highlighted different patterns of fishing methods and type of gear used. Catches from boats were greater than from the shore, both in abundance and biomass, considering mean values per fishing trip as well as CPUE. Spearfishers caught the highest biomass of sea bass per fishing trip, but the fishing rod with lure was the most effective type of gear in terms of CPUE. Longlines had the highest CPUE value in abundance but not in biomass: they caught numerous but small sea bass. Handlines were less effective, catching few sea bass in both abundance and biomass. We estimated that the annual total recreational sea bass catches was 3,173 tonnes of which 2,345 tonnes were kept. Since the annual commercial catches landings were evaluated at 5,160 tonnes, recreational landings represent 30% of the total fishing catches on the Atlantic coasts of France. Using fishers' self-reports was a valuable way to obtain new information on data-poor fisheries. Our results underline the importance of evaluating recreational fishing as a part of the total amount of fisheries catches. More studies are critically needed to assess overall fish resources caught in order to develop effective fishery management tools.

  12. DIETS IN SEA BASS AND SEA BREAM REARING — DEVELOPMENT AND PROSPECTIVE

    Directory of Open Access Journals (Sweden)

    Lav Bavčević

    2006-07-01

    Full Text Available Sea bass feeding, in the early beginning of cage culture activity, was based on modified trout pellets and minced sardines. Soon–after knowledge on sea bass and sea bream nutritional needs has been rapidly improved. Recommended balance between digestible proteins and digestible energy (DP/DE in sea bass and sea bream diets according to different authors is between 19— 21 MJ/kg and 21–24 MJ/kg. Variations of optimal DP/DE in scientific publications in the past, seems to be reflected on significant variation of DP/DE in commercial diets of different producers. Simple method to estimate optimal amino acid balance in the diet is amino acid analysis of whole body protein. Fat content in feed for sea bass and sea bream is around 20 %. Required enrichment with essential fatty acids (especially HUFA n 3 is usually resolved when at least 7% of fish oil is added in the diet. Essential fatty acid (EFA relative content in farmed sea bass and sea bream muscle fat was found to be similar to the relative content of EFA in fish oil. Vitamins–mineral premixes are standardized and given in higher concentration only in special feeds which can be enriched with immunostimulatns, and used in specific circumstances to improve immunobalance. To establish new feed production for sea bass and sea bream rearing, beside needed knowledge of nutritive value of raw materials and seasonal variations in fish demand, is important to know growth dynamics of cultured organisms and, is the most important — market situation. Competition and increased problems with quality raw material supply are constantly increasing production cost effective value. Today the margin for income–outcome equilibrium are 20 000 t, with the accent that it will be higher in coming years.

  13. Formation for Bass-Relief Microprofiles Based on an Analytic Formulation

    Institute of Scientific and Technical Information of China (English)

    SHI Li-Fang; DONG Xiao-Chun; DENG Qi-Ling; LUO Xian-Gang; DU Chun-Lei

    2007-01-01

    A method of fast design and fabrication for bass-relief micro-profiles is developed by using an analytic formulation to determine the exposure distribution. Based on an equivalent exposure threshold model, the formulation is simplified for the case of bass-relief profile corresponding to the smaller exposure dose. The mask function for a microlens array is designed without iteration involved by the analytic formulation. The experiment is performed to validate the method, and the fabrication result is obtained with the profile error less than 30 nm (rms).

  14. Stable isotope signatures reveal small-scale spatial separation in populations of European sea bass

    OpenAIRE

    Cambiè, Giulia; Kaiser, Michel J.; Marriott, Andrew L.; Fox, Jennifer; Lambert, Gwladys; Hiddink, Jan G.; Overy, Thomas; Bennett, Sarah A.; Leng, Melanie J.; McCarthy, Ian D

    2016-01-01

    Scientific information about European sea bass Dicentrarchus labrax stocks in the NE Atlantic is limited and a more accurate definition of the stock boundaries in the area is required to improve assessment and management advice. We investigated the connectivity and movement patterns of D. labrax in Wales (UK) using the stable isotope (δ13C and δ15N) composition of their scales. Analysis of δ13C and δ15N values in the last growing season was performed on 189 adult sea bass caught at 9 coastal ...

  15. Growth, dispersal, mortality, and contribution of largemouth bass stocked into Chickamauga Lake, Tennessee

    Science.gov (United States)

    Hoffman, K.J.; Bettoli, P.W.

    2005-01-01

    Marked fingerling largemouth bass Micropterus salmoides (both northern M. s. salmoides and Florida subspecies M. s. floridanus and their hybrid) were stocked into Chickamauga Lake, Tennessee, to enhance angling and introgress the Florida subspecies into the local gene pool. We evaluated mass marking and stocking success by sampling the stocked fish for 1 year poststocking. More than 128,000 fingerlings (35-64 mm total length) were immersed in a solution of 500 mg/L oxytetracycline (OTC) for 6 h and stocked into four embayments in the lake in spring 2002; two additional embayments served as controls and were not stocked (these embayments contained only wild, indigenous fish). In a blind test, 97% of sagittal otoliths were correctly scored as marked or unmarked. In a subsequent test, the OTC marks were clearly visible on every otolith removed from 240 OTC-treated bass held for 30 d. Age-0 largemouth bass were sampled with DC electrofishing gear at 7-19, 44-61, and 119-139 d after stocking, and sampling was conducted along 100-m transects within 1 km of the stocking sites in each embayment. Of all recaptures in the first sample, 31% occurred more than 600 m from the nearest stocking site, indicating rapid dispersal by some fish. Survival of stocked and wild age-0 largemouth bass was similar and low (4.5-6.9%) in two embayments; in the other two embayments, stocked fish survived at lower rates (0-4.3%) than wild fish (33.7-49.9%). Mean catches of all age-0 largemouth bass in the first sample were positively related to the number of fish stocked. By October 2002, the mean catch of all age-0 largemouth bass was similar among embayments. Contribution of stocked fish declined to approximately 2% (2 of 91 fish) the following spring. Cost per fingerling increased from US$0.35 at stocking to $12.00 at 140 d poststocking. Increasing the abundance of largemouth bass was not the primary objective of this stocking effort, but stocked fish will have to survive much better if

  16. Involvement of potato (Solanum tuberosum L.) MKK6 in response to potato virus Y.

    Science.gov (United States)

    Lazar, Ana; Coll, Anna; Dobnik, David; Baebler, Spela; Bedina-Zavec, Apolonija; Zel, Jana; Gruden, Kristina

    2014-01-01

    Mitogen-activated protein kinase (MAPK) cascades have crucial roles in the regulation of plant development and in plant responses to stress. Plant recognition of pathogen-associated molecular patterns or pathogen-derived effector proteins has been shown to trigger activation of several MAPKs. This then controls defence responses, including synthesis and/or signalling of defence hormones and activation of defence related genes. The MAPK cascade genes are highly complex and interconnected, and thus the precise signalling mechanisms in specific plant-pathogen interactions are still not known. Here we investigated the MAPK signalling network involved in immune responses of potato (Solanum tuberosum L.) to Potato virus Y, an important potato pathogen worldwide. Sequence analysis was performed to identify the complete MAPK kinase (MKK) family in potato, and to identify those regulated in the hypersensitive resistance response to Potato virus Y infection. Arabidopsis has 10 MKK family members, of which we identified five in potato and tomato (Solanum lycopersicum L.), and eight in Nicotiana benthamiana. Among these, StMKK6 is the most strongly regulated gene in response to Potato virus Y. The salicylic acid treatment revealed that StMKK6 is regulated by the hormone that is in agreement with the salicylic acid-regulated domains found in the StMKK6 promoter. The involvement of StMKK6 in potato defence response was confirmed by localisation studies, where StMKK6 accumulated strongly only in Potato-virus-Y-infected plants, and predominantly in the cell nucleus. Using a yeast two-hybrid method, we identified three StMKK6 targets downstream in the MAPK cascade: StMAPK4_2, StMAPK6 and StMAPK13. These data together provide further insight into the StMKK6 signalling module and its involvement in plant defence.

  17. Involvement of potato (Solanum tuberosum L. MKK6 in response to potato virus Y.

    Directory of Open Access Journals (Sweden)

    Ana Lazar

    Full Text Available Mitogen-activated protein kinase (MAPK cascades have crucial roles in the regulation of plant development and in plant responses to stress. Plant recognition of pathogen-associated molecular patterns or pathogen-derived effector proteins has been shown to trigger activation of several MAPKs. This then controls defence responses, including synthesis and/or signalling of defence hormones and activation of defence related genes. The MAPK cascade genes are highly complex and interconnected, and thus the precise signalling mechanisms in specific plant-pathogen interactions are still not known. Here we investigated the MAPK signalling network involved in immune responses of potato (Solanum tuberosum L. to Potato virus Y, an important potato pathogen worldwide. Sequence analysis was performed to identify the complete MAPK kinase (MKK family in potato, and to identify those regulated in the hypersensitive resistance response to Potato virus Y infection. Arabidopsis has 10 MKK family members, of which we identified five in potato and tomato (Solanum lycopersicum L., and eight in Nicotiana benthamiana. Among these, StMKK6 is the most strongly regulated gene in response to Potato virus Y. The salicylic acid treatment revealed that StMKK6 is regulated by the hormone that is in agreement with the salicylic acid-regulated domains found in the StMKK6 promoter. The involvement of StMKK6 in potato defence response was confirmed by localisation studies, where StMKK6 accumulated strongly only in Potato-virus-Y-infected plants, and predominantly in the cell nucleus. Using a yeast two-hybrid method, we identified three StMKK6 targets downstream in the MAPK cascade: StMAPK4_2, StMAPK6 and StMAPK13. These data together provide further insight into the StMKK6 signalling module and its involvement in plant defence.

  18. Innate immune responses and efficacy of using mushroom beta-glucan mixture (MBG) on orange-spotted grouper, Epinephelus coioides, aquaculture.

    Science.gov (United States)

    Chang, Ching-Sheng; Huang, Shih-Ling; Chen, Sherwin; Chen, Shiu-Nan

    2013-07-01

    This study attempts to describe the effects of innate immunity responses and field application of mushroom beta-glucan mixture (MBG) in cultured orange-sported grouper, Epinephelus coioides. Chemical analysis for MBG showed that the mixture contains 34.06% of macro-molecular polymers with bio-active linkage such as 3-; 3,4- and 4,6-glucopyranosyl and 6-linked galactopyranosyl residues. Study performed on the innate immunity showed that oral ingestion of MBG at 1.0 g and 2.0 g per kilogram of feed levels may significantly enhance the lysozyme activity, alternative complement activity, phagocytic activity and respiration burst of the experimental groupers. Observation on the experimental challenge of pathogen showed that uses of MBG at 0.1% and 0.2% levels in feed might significantly enhance the protection of grouper against Vibrio alginolyticus. Field trials performed on short and long-term culture showed that feeding of diet containing 0.1% or 0.2% of MBG may significantly enhance the survival of cultured groupers up to 16% when compared with those obtained from controls.

  19. Institutional analysis of marine reserves and fisheries governance policy experiments : a case study of Nassau grouper conservation in the Turks and Caicos Islands

    NARCIS (Netherlands)

    Rudd, M.A.

    2003-01-01

    Keywords: Ecosystem-based fisheries management; marine reserves; marine protected areas; social capital; institutional analysis; Turks and Caicos Islands; Nassau grouper Many tropical fisheries around the world are in crisis because of the depletion of valuable reef species and the destruction of ha

  20. The “potato road” and biogeographic history of potato cyst nematode populations from different continents

    Directory of Open Access Journals (Sweden)

    Or Violeta

    2014-01-01

    Full Text Available The general opinion about the introduction of potato in Europe is the one regarding the direction from South America to Spain and subsequent distribution to other continents. Some historical data point out an alternative road. The potato spread from its place of origin to other continents in the light of parasite-host relationship, relying on nematode molecular data, is discussed in the present work. Biogeographic history of potato cyst nematode populations from different continents is in congruence with historical records. [Projekat Ministarstva nauke Republike Srbije, br. TR 31018 i br. III 46007

  1. Swimming muscles power suction feeding in largemouth bass

    Science.gov (United States)

    Camp, Ariel L.; Roberts, Thomas J.; Brainerd, Elizabeth L.

    2015-01-01

    Most aquatic vertebrates use suction to capture food, relying on rapid expansion of the mouth cavity to accelerate water and food into the mouth. In ray-finned fishes, mouth expansion is both fast and forceful, and therefore requires considerable power. However, the cranial muscles of these fishes are relatively small and may not be able to produce enough power for suction expansion. The axial swimming muscles of these fishes also attach to the feeding apparatus and have the potential to generate mouth expansion. Because of their large size, these axial muscles could contribute substantial power to suction feeding. To determine whether suction feeding is powered primarily by axial muscles, we measured the power required for suction expansion in largemouth bass and compared it to the power capacities of the axial and cranial muscles. Using X-ray reconstruction of moving morphology (XROMM), we generated 3D animations of the mouth skeleton and created a dynamic digital endocast to measure the rate of mouth volume expansion. This time-resolved expansion rate was combined with intraoral pressure recordings to calculate the instantaneous power required for suction feeding. Peak expansion powers for all but the weakest strikes far exceeded the maximum power capacity of the cranial muscles. The axial muscles did not merely contribute but were the primary source of suction expansion power and generated up to 95% of peak expansion power. The recruitment of axial muscle power may have been crucial for the evolution of high-power suction feeding in ray-finned fishes. PMID:26100863

  2. Plastid transformation in potato: Solanum tuberosum.

    Science.gov (United States)

    Valkov, Vladimir T; Gargano, Daniela; Scotti, Nunzia; Cardi, Teodoro

    2014-01-01

    Although plastid transformation has attractive advantages and potential applications in plant biotechnology, for long time it has been highly efficient only in tobacco. The lack of efficient selection and regeneration protocols and, for some species, the inefficient recombination using heterologous flanking regions in transformation vectors prevented the extension of the technology to major crops. However, the availability of this technology for species other than tobacco could offer new possibilities in plant breeding, such as resistance management or improvement of nutritional value, with no or limited environmental concerns. Herein we describe an efficient plastid transformation protocol for potato (Solanum tuberosum subsp. tuberosum). By optimizing the tissue culture system and using transformation vectors carrying homologous potato flanking sequences, we obtained up to one transplastomic shoot per bombardment. Such efficiency is comparable to that usually achieved in tobacco. The method described in this chapter can be used to regenerate potato transplastomic plants expressing recombinant proteins in chloroplasts as well as in amyloplasts.

  3. Treated wastewater reuse on potato (Solanum tuberosum)

    DEFF Research Database (Denmark)

    Battilani, A.; Plauborg, Finn; Andersen, M. N.

    2014-01-01

    A field experiment was carried out in Northern Italy (Po Valley), within the frame of the EU project SAFIR, to asses the impact of treated wastewater reuse on potato yield, quality and hygiene. The potato crop was drip irrigated and fertigated. Wastewater produced by small communities (≤2000 EI......) was treated by Membrane Bio Reactor (MBR) technology and gravel filter (FTS) during three cropping seasons. Treated wastewater, soil and tubers were analysed for the faecal indicator bacterium E. coli and heavy metals contents. Potato total yield was similar for tap and reused water, while the marketable...... increased by 635 and 765 euro ha-1y-1 with FTS and MBR, respectively. Tubers were not contaminated by E. coli found in treated wastewater used for irrigation. The frequency of heavy metal and nitrate detection in tubers were comparable among water sources, as well as for the average contents. Only for boron...

  4. 从Couch Potato到Mouse Potato

    Institute of Scientific and Technical Information of China (English)

    刘盈盈

    2006-01-01

    @@ 一、案例描述 过完一个暑假,新学期又开始了.在第一节英语课上,我与学生们谈论起各自的假期生活.大部分学生说:I often watch TV.或是:I often play computer games.我在黑板上写出单词.potato,接着在前面加上另一个单词couch,然后我说:There are many couch potatoes in our class."Couch potato?根长在沙发上的土豆吗?"有一位学生大声问道.

  5. Typicity in Potato: Characterization of Geographic Origin

    Directory of Open Access Journals (Sweden)

    Marco Manzelli

    2010-03-01

    Full Text Available A two-year study was carried out in three regions of Italy and the crop performance and the chemical composition of tubers of three typical potato varieties evaluated. Carbon and nitrogen tuber content was determined by means of an elemental analyzer and the other mineral elements by means of a spectrometer. The same determinations were performed on soil samples taken from experimental areas. The Principal Component Analysis, applied to the results of mineral element tuber analysis, permitted the classification of all potato tuber samples according to their geographic origin. Only a partial discrimination was obtained in function of potato varieties. Some correlations between mineral content in the tubers and in the soil were also detected. Analytical and statistical methods proved to be useful in verifying the authenticity of guaranteed geographical food denominations.

  6. Welcome to the Potato Powered Cosmos

    CERN Multimedia

    2017-01-01

    As part of the Art@CMS initiative, UK artist Rachael Nee worked with a group of international teachers taking part in the 2017 High School Teacher Programme to produce an art installation. The Potato Powered Cosmos represents CERN as an interrelated system of experiment, machine, energy and people. The installation emphasises the importance of CERN’s community - it doesn’t work without human interaction. Art@CMS has produced a ‘how-to’ guide for other art and science teachers who would like to recreate the Potato Powered Cosmos with their students.

  7. Structure, processing, and properties of potatoes

    Science.gov (United States)

    Lloyd, Isabel K.; Kolos, Kimberly R.; Menegaux, Edmond C.; Luo, Huy; Mccuen, Richard H.; Regan, Thomas M.

    1992-01-01

    The objective of this experiment and lesson intended for high school students in an engineering or materials science course or college freshmen is to demonstrate the relation between processing, structure, and thermodynamic and physical properties. The specific objectives are to show the effect of structure and structural changes on thermodynamic properties (specific heat) and physical properties (compressive strength); to illustrate the first law of thermodynamics; to compare boiling a potato in water with cooking it in a microwave in terms of the rate of structural change and the energy consumed to 'process' the potato; and to demonstrate compression testing.

  8. Molecular cloning and characterization of PTEN in the orange-spotted grouper (Epinephelus coioides).

    Science.gov (United States)

    Luo, Sheng-Wei; Wang, Wei-Na; Xie, Ren-Chong; Xie, Fu-Xing; Kong, Jing-Rong; Xiao, Yu-Chao; Huang, Di; Sun, Zuo-Ming; Liu, Yuan; Wang, Cong

    2016-11-01

    PTEN is a key tumor suppressor gene that can play a regulatory role in the cellular proliferation, survival and apoptosis. In this study, the full-length PTEN (EcPTEN) was obtained, containing a 5'UTR of 745 bp, an ORF of 1269 bp and a 3'UTR of 106 bp. The EcPTEN gene encoded a polypeptide of 422 amino acids with an estimated molecular mass of 49.14 KDa and a predicted isoelectric point (pI) of 6.34. The deduced amino acid sequence analysis showed that EcPTEN comprised the conserved residues and the characteristic domains known to the critical functionality of PTEN. qRT-PCR analysis revealed that EcPTEN mRNA was broadly expressed in all the examined tissues, while the highest expression level was observed in liver, followed by the expression in blood, kidney, spleen, heart, gill, muscle and intestine. The groupers challenged with Vibrio alginolyticus showed a sharp increase of EcPTEN mRNA expression in immune tissues. In addition, western blotting analysis confirmed that the up-regulation of EcPTEN protein expression was steadily induced in liver. Subcellular localization analysis indicated that EcPTEN was localized in both nucleus and cytoplasm. Overexpression of EcPTEN can activate the apoptotic cascade and abrogate NF-kB, AP-1, Stat3 and Myc promoter activity in Hela cells. These results indicated that EcPTEN harboring highly-conserved domains with a close sequence similarity to those of PTP superfamily may disrupt the mammalian signalings and play a regulatory role in the apoptotic process.

  9. Optimum temperature for the growth performance of juvenile orange-spotted grouper ( Epinephelus coioides H.)

    Science.gov (United States)

    Lin, Xiangzhi; Xie, Shouqi; Su, Yongquan; Cui, Yibo

    2008-02-01

    Effects of water temperature (17, 21, 25, 30 and 35°C) and body size (14.75-281.41 g initial body weight) on food consumption, growth, feed conversion, and dry matter content in orange-spotted grouper fed to satiation were investigated. The combined effect of temperature ( T, °C) and body weight ( W, g) on maximum food consumption ( C max, g/day) was described as: ln C max=-7.411+0.828 ln W+0.317 T-0.004 7 T 2, and the optimum feeding temperature was 33.9°C. The combined effect of temperature and body weight on growth ( G) was described as: ln G=-4.461-0.208ln W+0.394 T-0.006 3 T 2. The optimum growth temperature was 31.4°C, whereas overall growth rates were high at 25, 30 and 35 °C. Feed conversion efficiencies ( FCE, %), increasing first and then decreasing with increasing temperature, averaged from 1.8 to 2.1 in terms of dry weight of food fish. The optimum temperature for FCE tended to be lower than that for growth or feeding. Dry matter content increased with both increasing water temperature (17, 25, 30 and 35°C) and body weight, and the combined effect of temperature and body weight on dry matter content ( DM, %) was described as: ln DM=3.232+0.01 4 ln W-0.004 4 T+0.001 2 Tln W.

  10. THE DIGESTIVE TRACT DEVELOPMENT OF THE TIGER GROUPER Epinephelus fuscoguttatus LARVAE TREATED WITH THYROXINE HORMONE

    Directory of Open Access Journals (Sweden)

    Ahmad Muzaki

    2012-12-01

    Full Text Available Thyroxin administration in tiger grouper larval rearing was conducted to determine its effect on development of digestive tract of the larvae. Newly hatched larvae were treated with 0 mg/L (control, 0.1 mg/L, and 0.2 mg/L of thyroxin for 2 hours in a 30 L tank before were transferred into a 1 m3 rearing tank. Samples were collected daily until 10 DAH and every 3 days until 40 DAH. Development of digestive tract was observed using histological method. For all treatments, the digestive tract was the same on 1 DAH and 2 DAH. The digestive tract of 1 DAH larvae was still closed and still in the form of a simple tube. The mouth, buccopharynx, liver, pancreas, and rectum were found on 2 DAH. On 3 DAH, the esophagus, stomach, intestines, and anus started to develop. At this stage, the digestive tract of larvae treated with and without thyroxin started to become distinguishable. Several goblet cells were noticed in the rectum of the treated larvae but not in the control. Digestive tract developed earlier in treated larvae compared to the control group, such as appearance of tongue, gill raker, fundic, and cardiac stomach development, formation of pharyngeal tooth, and gastric gland. Metamorphosis of larvae into juvenile on treated larvae occurred than that the control larvae earlier.

  11. Hybridisation among groupers (genus Cephalopholis) at the eastern Indian Ocean suture zone: taxonomic and evolutionary implications

    KAUST Repository

    Payet, Samuel D.

    2016-08-05

    Hybridisation is a significant evolutionary process that until recently was considered rare in the marine environment. A suture zone in the eastern Indian Ocean is home to numerous hybridising sister species, providing an ideal opportunity to determine how hybridisation affects speciation and biodiversity in coral reef fishes. At this location, hybridisation between two grouper (Epinephelidae) species: Cephalopholis urodeta (Pacific Ocean) and C. nigripinnis (Indian Ocean) was investigated to determine the genetic basis of hybridisation and to compare the ecology and life history of hybrids and their parent species. This approach aimed to provide insights into the taxonomic and evolutionary consequences of hybridisation. Despite clear phenotypic differences, multiple molecular markers revealed hybrids, and their parent species were genetically homogenous within and (thousands of kilometres) outside of the hybrid zone. Hybrids were at least as fit as their parent species (in terms of growth, reproduction, and abundance) and were observed in a broad range of intermediate phenotypes. The two species appear to be interbreeding at Christmas Island due to inherent biological and ecological compatibilities, and the lack of genetic structure may be explained by three potential scenarios: (1) hybridisation and introgression; (2) discordance between morphology and genetics; and (3) incomplete lineage sorting. Further molecular analyses are necessary to discriminate these scenarios. Regardless of which applies, C. urodeta and C. nigripinnis are unlikely to evolve in reproductive isolation as they cohabit where they are common (Christmas Island) and will source congeneric mates where they are rare (Cocos Keeling Islands). Our results add to the growing body of evidence that hybridisation among coral reef fishes is a dynamic evolutionary factor. © 2016 Springer-Verlag Berlin Heidelberg

  12. Early Osteological Development of Larvae and Juveniles in Red Spotted Grouper, Epinephelus akaara (Pisces: Serranidae).

    Science.gov (United States)

    Park, Jong Youn; Han, Kyeong Ho; Cho, Jae Kwon; Myeong, Jeong In; Park, Jae Min

    2016-06-01

    We observed the osteological development of larval and juvenile red spotted grouper (Epinephelus akaara) in order to generate data for the assessment of skeletal deformities and to inform phylogenetic systematics research. Larvae and juveniles were obtained from a aquafarm in Muan-gun, Jeolla-namdo Province, Korea. The average water temperature at the time of breeding was 23.0°C and average water salinity was 33.0 psu. Freshly hatched fish larvae had not undergone any ossification, but ossification of the parasphenoid bone, which forms the base of the cranium, occurred as the juveniles reached an average body length (BL) of 2.49 mm. At the same time, ossification of the preopercle and opercle occurred in the operculum, and ossification of the maxilla, which forms the upper jaw, and the dentary bones, which form the lower jaw, began. In addition, ossification of the vertebra occurred by formation of 7 vertebral centra and the neural spine in the abdominal vertebra. When the juveniles reached an average (BL) of 5.22 mm, ossification of the nasal, lateral ethmoid, and alisphenoid bones occurred in the cranium; ossification of the endopterygoid and metapterygoid bones began in the palatine region; and ossification of the hypohyal and interhyal bones occurred in the hyoid arch. At an average (BL) of 20.9 mm, ossification of the basisphenoid bone in the cranium and the suborbital bone in the orbital region occurred. Ossification of the vertebra then occurred by the formation of long pairs of ribs from the third to the ninth abdominal vertebrae, completing osteological development.

  13. Optimum temperature for the growth performance of juvenile orange-spotted grouper (Epinephelus coioides H.)

    Institute of Scientific and Technical Information of China (English)

    LIN Xiangzhi; XIE Shouqi; SU Yongquan; CUI Yibo

    2008-01-01

    Effects of water temperature (17,21,25,30 and 35℃) and body size (14.75-281.41 g initial body weight) on food consumption,growth,feed conversion,and dry matter content in orange-spotted grouper fed to satiation were investigated.The combined effect of temperature (T,℃) and body weight (W, g) on maximum food consumption (Cmax,g/day) was described as:InCmax=-7.411+0.828 InW+0.317T-0.004 7T2,and the optimum feeding temperature was 33.9℃.The combined effect of temperature and body weight on growth (G) was described as: InG=-4.461-0.208lnW+0.394T-0.006 3T2.The optimum growth temperature was 31.4℃,whereas overall growth rates were high at 25,30 and 35℃.Feed conversion efficiencies (FCE,%),increasing first and then decreasing with increasing temperature,averaged from 1.8 to 2.1 in terms of dry weight of food fish.The optimum temperature for FCE tended to be lower than that for growth or feeding.Dry matter content increased with both increasing water temperature (17,25,30 and 35℃) and body weight,and the combined effect of temperature and body weight on dry matter content (DM,%) was described as:InDM =3.232+0.01 4 lnW-0.004 4T+0.001 2TlnW.

  14. Hybridisation among groupers (genus Cephalopholis) at the eastern Indian Ocean suture zone: taxonomic and evolutionary implications

    Science.gov (United States)

    Payet, Samuel D.; Hobbs, Jean-Paul A.; DiBattista, Joseph D.; Newman, Stephen J.; Sinclair-Taylor, Tane; Berumen, Michael L.; McIlwain, Jennifer L.

    2016-12-01

    Hybridisation is a significant evolutionary process that until recently was considered rare in the marine environment. A suture zone in the eastern Indian Ocean is home to numerous hybridising sister species, providing an ideal opportunity to determine how hybridisation affects speciation and biodiversity in coral reef fishes. At this location, hybridisation between two grouper (Epinephelidae) species: Cephalopholis urodeta (Pacific Ocean) and C. nigripinnis (Indian Ocean) was investigated to determine the genetic basis of hybridisation and to compare the ecology and life history of hybrids and their parent species. This approach aimed to provide insights into the taxonomic and evolutionary consequences of hybridisation. Despite clear phenotypic differences, multiple molecular markers revealed hybrids, and their parent species were genetically homogenous within and (thousands of kilometres) outside of the hybrid zone. Hybrids were at least as fit as their parent species (in terms of growth, reproduction, and abundance) and were observed in a broad range of intermediate phenotypes. The two species appear to be interbreeding at Christmas Island due to inherent biological and ecological compatibilities, and the lack of genetic structure may be explained by three potential scenarios: (1) hybridisation and introgression; (2) discordance between morphology and genetics; and (3) incomplete lineage sorting. Further molecular analyses are necessary to discriminate these scenarios. Regardless of which applies, C. urodeta and C. nigripinnis are unlikely to evolve in reproductive isolation as they cohabit where they are common (Christmas Island) and will source congeneric mates where they are rare (Cocos Keeling Islands). Our results add to the growing body of evidence that hybridisation among coral reef fishes is a dynamic evolutionary factor.

  15. Spatial dynamics of the red grouper Epinephelus morio (Pisces: Serranidae on the Campeche Bank, Gulf of Mexico

    Directory of Open Access Journals (Sweden)

    Jorge A. López-Rocha

    2013-06-01

    Full Text Available The spatial dynamics of the red grouper Epinephelus morio plays a fundamental role in the fishery management on the Campeche Bank, where it is overfished. The objective of this study was to characterize the spatial dynamics of this population. We used a dynamic model of spatial distribution to estimate population movement rates between adjacent areas. The model was applied using information on catch per unit effort and length-frequency distributions for the Mexican mid-sized fleet that operated in the area in the period 1973-1977. These data were chosen to ensure that the information would reflect the condition of the resource before overfishing. It was possible to quantify the spatial dynamics of the red grouper and the results were consistent with previously known movement patterns. The results showed different movement rates and temporal patterns of movement for different population sectors. The spawning aggregations and the seasonal upwelling occurring in the eastern part of the Bank were considered as key factors influencing the pattern of population movements.

  16. Microsatellite analysis of the genetic relationships between wild and cultivated giant grouper in the South China Sea

    Indian Academy of Sciences (India)

    QING WANG; XIANG WANG; ZHENZHEN XIE; YIQ ILI; LING XIAO; CHENG PENG; HAIFA ZHANG; SHUISHENG LI; YONG ZHANG; HAORAN LIN

    2016-06-01

    The giant grouper (Epinephelus lanceolatus) is a coral fish with high commercial value in Southeast Asia. In the present study, we isolated 11 microsatellite DNA markers, and analysed the genetic diversity and differentiation between cultured stocks and wild populations of the giant grouper originating from the South China Sea. A total of 390 alleles at 11 microsatellite loci were detected in 130 individuals from five different populations. The expected heterozygosity varied from 0.131 to 0.855 with a mean value of 0.623 and the observed heterozygosity varied from 0.145 to 0.869 with a mean value of 0.379. The allelic richness and heterozygosity studies revealed that the genetic diversity of the cultured population was significantly reduced when compared with that of the wild population. The Fis,pairwise Fst values, analysis of molecular variance (AMOVA), three- dimensional factorial correspondence analysis and structure analysis revealed significant population differentiation between the cultured stocks and the wild populations, among the three cultured populations and between the two wild populations. These differences may be caused by random genetic drift, the effects of artificial selection and founder effects. Our results will be useful in the management of cultured stocks and conservation of wild populations of the giant group

  17. Molecular characterization and functional analysis of Toll-like receptor 3 gene in orange-spotted grouper (Epinephelus coioides).

    Science.gov (United States)

    Lin, Kebing; Ge, Hui; Lin, Qi; Wu, Jianshao; He, Libin; Fang, Qiongshan; Zhou, Chen; Sun, Minqiu; Huang, Zhongchi

    2013-09-15

    Toll-like receptor 3 (TLR3) plays an important role in activating innate immune responses during viral infection. In this report, TLR3 (EcTLR3) was characterized and analyzed for the first time in Epinephelus coioides. The full-length EcTLR3 cDNA is predicted to encode a 909 amino acid polypeptide that contains a signal peptide sequence, 18 leucine-rich repeat (LRR) motifs, a transmembrane region and a Toll/interleukin-1 receptor (TIR) domain. Quantitative real-time PCR revealed that the EcTLR3 mRNA was much more abundant in the liver than in other immune organs, and that the expression levels were very low in hemocyte and muscle. During development of the grouper, the levels of EcTLR3 transcripts increased with age, with very low expression levels at the early stages of development. EcTLR3 mRNA levels were examined in the liver at different times after treatment with polyriboinosinic polyribocytidylic acid (Poly I:C), and in nervous necrosis virus (NNV)-infected larval groupers. The results suggested that EcTLR3 plays an important role in a fish's defense against viral infection.

  18. cDNA cloning and mRNA expression of neuropeptide Y in orange spotted grouper, Epinephelus coioides.

    Science.gov (United States)

    Chen, Rong; Li, Wensheng; Lin, Haoran

    2005-09-01

    A full-length cDNA encoding the neuropeptide Y (NPY) was cloned from the hypothalamus of orange spotted grouper (Epinephelus coioides) by rapid amplification of cDNA ends approaches. The NPY cDNA sequence is 688 bp long and has an open reading frame of 300 bp encoding prepro-NPY with 99 amino acids. The deduced amino acid sequences contain a 28-amino-acids signal peptide followed by a 36-amino-acids mature NPY peptide. mRNA expression of NPY was determined using semi-quantitative RT-PCR followed by Southern blot analysis. NPY mRNA was expressed in olfactory bulb, telencephalon, pituitary, hypothalamus, optic tectum-thalamus, medulla oblongata, cerebellum and spinal cord. Low levels of NPY mRNA expression were found in retina, ovary and stomach, while much lower levels of expression were detected in liver, heart, gill, skin, anterior intestine, thymus and blood. No NPY mRNA expression was observed in unfertilized eggs, newly fertilized eggs, 16-cells stage and morula stage of the embryo and lower levels of expression were detected in the blastula, gastrula and neurula stages. It was highly expressed from lens formation stage to 52-day-old larval stage. NPY might be involved in the late embryonic and larval development of the orange spotted grouper.

  19. Examining Social Adaptations in a Volatile Landscape in Northern Mongolia via the Agent-Based Model Ger Grouper

    Directory of Open Access Journals (Sweden)

    Julia K. Clark

    2015-03-01

    Full Text Available The environment of the mountain-steppe-taiga of northern Mongolia is often characterized as marginal because of the high altitude, highly variable precipitation levels, low winter temperatures, and periodic droughts coupled with severe winter storms (known as dzuds. Despite these conditions, herders have inhabited this landscape for thousands of years, and hunter-gatherer-fishers before that. One way in which the risks associated with such a challenging and variable landscape are mitigated is through social networks and inter-family cooperation. We present an agent-based simulation, Ger Grouper, to examine how households have mitigated these risks through cooperation. The Ger Grouper simulation takes into account locational decisions of households, looks at fission/fusion dynamics of households and how those relate to environmental pressures, and assesses how degrees of relatedness can influence sharing of resources during harsh winters. This model, coupled with the traditional archaeological and ethnographic methods, helps shed light on the links between early Mongolian pastoralist adaptations and the environment. While preliminary results are promising, it is hoped that further development of this model will be able to characterize changing land-use patterns as social and political networks developed.

  20. Nucleic acids digestion by enzymes in the stomach of snakehead (Channa argus) and banded grouper (Epinephelus awoara).

    Science.gov (United States)

    Liu, Yu; Zhang, Yanfang; Jiang, Wei; Wang, Jing; Pan, Xiaoming; Wu, Wei; Cao, Minjie; Dong, Ping; Liang, Xingguo

    2017-02-01

    Dietary nucleic acids (NAs) were important nutrients. However, the digestion of NAs in stomach has not been studied. In this study, the digestion of NAs by enzymes from fish stomach was investigated. The snakehead pepsins (SP) which were the main enzymes in stomach were extracted and purified. The purity of SP was evaluated by SDS-PAGE and HPLC. The snakehead pepsin 2 (SP2) which was the main component in the extracts was used for investigating the protein and NAs digestion activity. SP2 could digest NAs, including λ DNA and salmon sperm DNA. Interestingly, the digestion could be inhibited by treatment of alkaline solution at pH 8.0 and pepstatin A, and the digestion could happen either in the presence or absence of hemoglobin (Hb) and BSA as the protein substrates. Similarly, the stomach enzymes of banded grouper also showed the NAs digestion activity. NAs could be digested by the stomach enzymes of snakehead and banded grouper. It may be helpful for understanding both animal nutrition and NAs metabolic pathway.

  1. Investigating the origin of vagrant dusky groupers, Epinephelus marginatus (Lowe, 1834), in coastal waters of Réunion Island.

    Science.gov (United States)

    Reid, Kerry; Crochelet, Estelle; Bloomer, Paulette; Hoareau, Thierry B

    2016-10-01

    Due to their geographic isolation, biotas of oceanic islands are likely influenced by episodic long distance dispersal events, but such observations are scarce. In June 2012, fishermen from Réunion Island caught an unknown specimen of grouper, identified as dusky grouper Epinephelus marginatus (Lowe, 1834). This was highly unexpected considering the large distance of its closest verified occurrence (South Africa, ∼2500km). To identify the origin of this specimen and the mechanisms driving this potential long distance colonization, we combined genetic analyses and hydrodynamic connectivity modeling approaches. Molecular markers and samples from various locations across the distribution range resulted in the identification of three putative source populations. The Réunion specimen clustered genetically with South Africa. The estimated spawning period in relation to the connectivity modeling of larvae showed no possible direct connection between South Africa and Réunion. However, connectivity was predicted through intermediate stepping stone populations likely located around the southern tip of Madagascar, where the occurrence of the species has yet to be verified. The results further highlight the potential role of the cyclone Bingiza (February 2011) in the connection between Madagascar and Réunion. This shows that cyclones may be an important driver in long distance colonization of oceanic islands.

  2. The ups and downs of coral reef fishes: the genetic characteristics of a formerly severely overfished but currently recovering Nassau grouper fish spawning aggregation

    Science.gov (United States)

    Bernard, A. M.; Feldheim, K. A.; Nemeth, R.; Kadison, E.; Blondeau, J.; Semmens, B. X.; Shivji, M. S.

    2016-03-01

    The Nassau grouper ( Epinephelus striatus) has sustained large declines across its distribution, including extirpation of many of its fish spawning aggregations (FSAs). Within US Virgin Islands (USVI) waters, Nassau grouper FSAs were overfished until their disappearance in the 1970s and 1980s. In the early 2000s, however, Nassau grouper were found gathering at Grammanik Bank, USVI, a mesophotic coral reef adjacent to one of the extinct aggregation sites, and regulatory protective measures were implemented to protect this fledgling FSA. The population genetic dynamics of this rapid FSA deterioration followed by protection-facilitated, incipient recovery are unknown. We addressed two objectives: (1) we explored which factors (i.e., local vs. external recruitment) might be key in shaping the USVI FSA recovery; and (2) we examined the consequences of severe past overfishing on this FSA's current genetic status. We genotyped individuals (15 microsatellites) from the USVI FSA comprising three successive spawning years (2008-2010), as well as individuals from a much larger, presumably less impacted, Nassau grouper FSA in the Cayman Islands, to assess their comparative population dynamics. No population structure was detected between the USVI and Cayman FSAs ( F ST = -0.0004); however, a temporally waning, genetic bottleneck signal was detected in the USVI FSA. Parentage analysis failed to identify any parent-offspring matches between USVI FSA adults and nearby juveniles, and relatedness analysis showed low levels of genetic relatedness among USVI FSA individuals. Genetic diversity across USVI FSA temporal collections was relatively high, and no marked differences were found between the USVI and Cayman FSAs. These collective results suggest that external recruitment is an important driver of the USVI FSA recovery. Furthermore, despite an apparent genetic bottleneck, the genetic diversity of USVI Nassau grouper has not been severely compromised. Our findings also provide a

  3. Cytoplasmic localization of Lrh-1 down-regulates ovarian follicular cyp19a1a expression in a teleost, the orange-spotted grouper Epinephelus coioides.

    Science.gov (United States)

    Lu, Huijie; Zhang, Shen; Liu, Qiongyou; Zhang, Lihong; Zhang, Weimin

    2014-08-01

    Liver receptor homolog-1 (LRH-1) is a conserved member of the NR5A subfamily in vertebrates and a potential regulator of estrogen synthesis in the ovarian granulosa cells. An Lrh-1 homologue was obtained from the orange-spotted grouper Epinephelus coioides that contains the conserved structural features of NR5A and is phylogenetically closely related to NR5A2. The expression of the orange-spotted grouper Lrh-1 is tissue-specific with relatively higher levels in the liver and ovary. The immunoreactive signals for Lrh-1 and Cyp19a1a were present in the ovarian follicular cells and germ cells. In the ovarian follicular cells, Lrh-1 was present both in the nucleus and cytoplasm, and colocalized with Cyp19a1a. The expression levels of both increased during vitellogenesis whereas only Cyp19a1a dramatically decreased toward maturation when Lrh-1 was localized almost exclusively to the cytoplasm of the follicular cells. The orange-spotted grouper Lrh-1 could up-regulate cyp19a1a transcription in vitro via the two conserved Ftz-f1 sites in cyp19a1a promoter. Chromatin immunoprecipitation analysis showed that the orange-spotted grouper Lrh-1 could bind cyp19a1a promoter in vivo with a higher abundance in the vitellogenic ovary, whereas the binding was dramatically decreased in the mature ovary. Taken together, the results of present study demonstrate that Lrh-1 plays an important role in up-regulating cyp19a1a gene in the ovarian follicular cells during vitellogenesis, and the sequestration of Lrh-1 to the cytoplasm may down-regulate cyp19a1a expression in the mature ovary. This mechanism for modifying transcriptional roles of the orange-spotted grouper Lrh-1 may shed new light on the regulation of Cyp19a1 expression in other vertebrates as well.

  4. Effect of Blanching on Structural Quality of Dried Potato Slices.

    Science.gov (United States)

    Maté; Quartaert; Meerdink; van't Riet K

    1998-02-16

    Mechanical properties of potato slices were monitored during blanching, as indicators of structural changes. As expected, blanching resulted in weakening of potato structure. Gelatinization, which occurred during the first 2 min, did not promote an immediate weakening of the potato tissue. More than 80% of the changes in mechanical properties occurred during the first 30 min of blanching. Potato slices blanched for 2 and 30 min as well as unblanched ones were dried in a convective air drier at 48 degrees C. Bulk and true density, porosity, and shrinkage were monitored with time. Blanched potatoes resulted in a significantly more compact, less porous product with lower effective water diffusivity than unblanched potatoes. The results indicated that changes that occurred during the first 2 min of blanching had a much greater influence on structural quality of dried potatoes than changes that occurred from 2 to 30 min of blanching.

  5. Histogenesis of potato light sprouts in healthy plants and those infected with potato leaf roll virus

    Directory of Open Access Journals (Sweden)

    Grażyna Garbaczewska

    2013-12-01

    Full Text Available Developmental stages of potato (Solanum tuberosum light sprouts in healthy plants and those infected with potato leaf roll virus (PLRV have been distinguished. Potato light sprouts from healthy tubers differentiate in the early stages to the apical and basal parts, which are characterized by distinct dynamics of growth. Ultrastructural examination of apex meristem and phloem ontogeny was carried out for healthy plants. In the development of potato light sprouts of plants infected with PLRV a great many anomalies have been described. Three types of light sprouts developed from infected tubers. Anatomical investigations indicated a rapid growth of the number of necroses in the phloem, and submicroscopic observations showed the presence of virus particles and cytopathological structures: tubular and vesicular structures, paramural bodies and callose deposits. In the companion cells of the phloem the occurrence of very regular inclusions of virus particles was recorded.

  6. Field and storage testing Bt potatoes for resistance to potato tuberworm (Lepidoptera: Gelichiidae).

    Science.gov (United States)

    Douches, D S; Pett, W; Santos, F; Coombs, J; Grafius, E; Li, W; Metry, E A; el-Din, T Nasr; Madkour, M

    2004-08-01

    Potato tuberworm, Phthorimaea operculella (Zeller), is the most serious insect pest of potatoes worldwide. The introduction of the Bacillus thuringiensis (Bt) toxin gene through genetic engineering offers host plant resistance for the management of potato tuberworm. We report on the field and storage studies to evaluate Bt-cry5 potato lines for resistance to potato tuberworm in Egypt under natural infestations and their agronomic performance in both Egypt and Michigan. From 1997 to 2001, field experiments were conducted at the International Potato Center (CIP) Research Station, Kafr El-Zyat, Egypt, and/or Agricultural Genetic Engineering Institute (AGERI), Giza, Egypt, to evaluate resistance to tuberworm. A total of 27 Bt-transgenic potato lines from six different Bt constructs were evaluated over a 5-yr period. After harvest and evaluation of the agronomic trials, storage evaluation of potato tuberworm damage was done at the CIP Research Station. The 1997 field trial was the first field test of genetically engineered crops in Egypt. Field tests to assess potato tuberworm resistance in Egypt were able to differentiate between the Bt-transgenic lines and the nontransgenic lines/cultivars in 1999, 2000, and 2001. The Bt-cry5-Spunta lines (Spunta-G2, Spunta-G3, and Spunta-6a3) were the most resistant lines in field with 99-100% of tubers free of damage. In the 2001 storage study, these lines were also over 90% free of tuberworm damage after 3 mo. NYL235-4.13, which combines glandular trichomes with the Bt-cry5/gus fusion construct, also had a high percentage of clean tubers in the field studies. In agronomic field trials in Michigan from 1997 to 2001, the Bt-transgenic lines in most instances performed similar to the nontransgenic line in the agronomic trials; however, in Egypt (1998-1999), the yields were less than one-half of those in Michigan. Expression of the Bt-cry5 gene in the potato tuber and foliage will provide the seed producer and grower a tool in which to

  7. Strengths,Problems,and Recommendations of Potato Staple Food Development in Zhejiang Province

    Institute of Scientific and Technical Information of China (English)

    Weifang; FAN; Aiping; LAI; Guoquan; LU

    2015-01-01

    China launched the potato staple food strategy in 2015. The potato staple food strategy focuses on increasing potato consumption and promoting potato production through processing and use of potato staple food. This provides new opportunity for development of potato in Zhejiang Province. This paper analyzed development strengths and existing problems of the potato industry in Zhejiang Province. On this basis,it came up with pertinent recommendations for potato staple food development in Zhejiang Province,so as to guide consumption with nutrition,and guide production with consumption,to provide theoretical foundation for development of potato industry in Zhejiang Province.

  8. Effect of dissolved oxygen concentration on growth of fingerling hybrid striped bass

    Science.gov (United States)

    Management of dissolved oxygen (DO) concentration in production ponds is important because fish growth and yield are greater in ponds with higher DO concentrations. The purpose of this study was to evaluate growth and metabolic responses of hybrid striped bass (Morone chrysops x M. saxatilis; HSB) f...

  9. QTL for body weight, morphometric traits and stress response in European sea bass Dicentrarchus labrax.

    NARCIS (Netherlands)

    Massault, C.; Hellemans, J.; Louro, B.; Batargias, C.; Houdt, van I.S.; Canario, A.; Volckaert, F.A.M.; Bovenhuis, H.; Haley, C.S.; Koning, de D.J.

    2010-01-01

    Natural mating and mass spawning in the European sea bass (Dicentrarchus labrax L., Moronidae, Teleostei) complicate genetic studies and the implementation of selective breeding schemes. We utilized a two-step experimental design for detecting QTL in mass-spawning species: 2122 offspring from natura

  10. Low frequency sound reproduction in irregular rooms using CABS (Control Acoustic Bass System)

    DEFF Research Database (Denmark)

    Celestinos, Adrian; Nielsen, Sofus Birkedal

    2011-01-01

    Early investigations on low frequency sound reproduction in rectangular rooms using CABS (Controlled Acoustic Bass System) have shown good results on simulations and measurements in real rooms. CABS takes the advantage of having a rectangular room with parallel walls. By using two low frequency l...

  11. Dworshak Reservoir Investigations: Trout, Bass and Forage Species, 1988 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Statler, David P.

    1989-07-01

    For the period March 1988 through February 1989, an estimated 154,558 angler-hours were expended to catch 20,037 rainbow trout, 3,933 smallmouth bass, and 14 bull trout. Estimated catch of other species, including cutthroat trout, whitefish, suckers, and squawfish totalled 84. Subcatchable rainbow trout (135 to 185mm) caught and released by boat anglers comprised 53% (12,770) of the total catch. An estimated 88.6% of the smallmouth bass caught were under the minimum legal size limit of 305mm and were released. Estimated harvest of smallmouth bass was 450. The highest monthly catch rate documented for all species excluding kokanee was 1.81 fish per hour during October. Severe weather conditions during February reduced effort and no fish were documented in the creel. Cumulative catch rates through the survey period for rainbow trout and smallmouth bass were .13 and .02, respectively. The lowest monthly catch rates generally occurred when fishing pressure was the highest, with fishing effort targeting on kokanee during the May through July high use periods. The Arlee strain rainbow trout was somewhat more vulnerable to boat anglers than the Shasta strain during the early post-release period. 20 refs., 16 figs., 12 tabs.

  12. Dworshak Reservoir Investigations: Trout, Bass and Forage Species, 1989 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Statler, David P.

    1990-07-01

    The Nez Perce Tribe and the Idaho Department of Fish and Game (IDFG) entered into separate intergovernmental agreements with the Bonneville Power Administration in a cooperative four-year effort to study impacts of Dworshak Dam operation on resident fisheries. This third annual report focuses on rainbow trout, smallmouth bass, and forage species. 22 refs., 19 figs., 11 tabs.

  13. Effect of salinity on expression of branchial ion transporters in striped bass (Morone saxatilis)

    DEFF Research Database (Denmark)

    Tipsmark, Christian Kølbaek; Madsen, Steffen Søndergaard; Borski, Russell John

    2004-01-01

    The time course of osmoregulatory adjustments and expressional changes of three key ion transporters in the gill were investigated in the striped bass during salinity acclimations. In three experiments, fish were transferred from fresh water (FW) to seawater (SW), from SW to FW, and from 15-ppt...

  14. BIOACCUMULATION AND AQUATIC SYSTEM SIMULATOR (BASS) USER'S MANUAL BETA TEST VERSION 2.1

    Science.gov (United States)

    BASS (Bioaccumulation and Aquatic System Simulator) is a Fortran 95 simulation program that predicts the population and bioaccumulation dynamics of age-structured fish assemblages that are exposed to hydrophobic organic pollutants and class B and borderline metals that complex wi...

  15. Toxicity of trace element and salinity mixtures to striped bass (Morone saxatilis) and Daphnia magna

    Science.gov (United States)

    Dwyer, F.J.; Burch, S.A.; Ingersoll, C.G.; Hunn, J.B.

    1992-01-01

    Acute toxicity tests with reconstituted water were conducted to investigate the relationship between water hardness, salinity, and a mixture of trace elements found in irrigation drain waters entering Stillwater Wildlife Management Area (SWMA), near Fallon, Nevada. The SWMA has been the site of many fish kills in recent years, and previous toxicity studies indicated that one drain water, Pintail Bay, was acutely toxic to organisms acclimated or cultured in fresh water or salt water. This toxicity could reflect both the ionic composition of this saline water and the presence of trace elements. The lowest water salinity tested with Daphnia magna was near the upper salinity tolerance of these organisms; therefore, we were unable to differentiate between the toxic effects of ion composition and those of trace elements. In toxicity tests conducted with striped bass (Morone saxatilis), we found that the extent to which salinity was lethal to striped bass depended on the ion composition of that salinity. Survival of striped bass increased as hardness increased. In addition, a trace element mixture was toxic to striped bass, even though the concentrations of individual elements were below expected acutely lethal concentrations. Although salinity is an important water quality characteristic, the ionic composition of the water must be considered when one assesses the hazard of irrigation drain waters to aquatic organisms.

  16. Indigenous development and performance evaluation of BARC aerodynamic size separator (BASS)

    CERN Document Server

    Singh, S; Khan, A; Mayya, Y S; Narayanan, K P; Purwar, R C; Sapra, B K; Sunny, F

    2002-01-01

    Commercially available cascade impactors, commonly used for aerodynamic size separation of aerosol particles, are based on the principle of inertial impaction. As of now, these instruments are imported at a cost of several lakhs of rupees; hence an effort has been made to develop an aerodynamic particle sizer indigenously in BARC. This unit, referred to as BARC Aerodynamic Size Separator (BASS), separates aerosols into seven size classes ranging from 0.53 mu m to 10 mu m and operates at a flow rate of 45 Ipm. Intercomparison studies between the standard Andersen Mark-II (Grasbey Andersen Inc.) impactor and BASS using nebulizer generated aerosols have consistently shown excellent performance by BASS in all respects. In particular, BASS yielded the parameters of polydisperse aerosols quite accurately. Experiments to evaluate the individual stage cut-off diameters show that these are within 8% of their designed value for all stages except the higher two stages which indicate about 30% lower values than the desig...

  17. Do the visual conditions at the point of escape affect European sea bass escape behavior?

    Directory of Open Access Journals (Sweden)

    I.E. PAPADAKIS

    2013-04-01

    Full Text Available European sea bass (Dicentrarchus labrax, an important species for the Mediterranean aquaculture industry, has been reported to escape from sea cage installations. Fish escapes are caused mainly by operational and technical failures that eventually result into a creation of a tear. Escapees may interact with wild stocks through interbreeding, transfer of pathogens and competition for food. The aim of this study was to examine at which extent the presence of a visible obstacle close to a tear on the net have an influence on sea bass propensity to escape. Fish were initially confined into small sea cages, with a tear at one side. The escape behavior was tested under experimental conditions. It is clearly demonstrated that sea bass was able to locate a tear on the net pen, immediately after its appearance. Crossings occurred in all cages, in singles or in a series of up to seven individuals. The presence of an obstacle close to the net tear altered the escape behavior of D. labrax resulting in a delay that eventually reduced the escape rate. Concluding, it is highly recommended that sea bass cages should be kept internally the culture array. Furthermore, the placement of artificial obstacles close to the sea cages could be an efficient practice that mitigates the escape risk after severe environmental conditions.

  18. Do the visual conditions at the point of escape affect European sea bass escape behavior?

    Directory of Open Access Journals (Sweden)

    I.E. PAPADAKIS

    2013-03-01

    Full Text Available European sea bass (Dicentrarchus labrax, an important species for the Mediterranean aquaculture industry, has been reported to escape from sea cage installations. Fish escapes are caused mainly by operational and technical failures that eventually result into a creation of a tear. Escapees may interact with wild stocks through interbreeding, transfer of pathogens and competition for food. The aim of this study was to examine at which extent the presence of a visible obstacle close to a tear on the net have an influence on sea bass propensity to escape. Fish were initially confined into small sea cages, with a tear at one side. The escape behavior was tested under experimental conditions. It is clearly demonstrated that sea bass was able to locate a tear on the net pen, immediately after its appearance. Crossings occurred in all cages, in singles or in a series of up to seven individuals. The presence of an obstacle close to the net tear altered the escape behavior of D. labrax resulting in a delay that eventually reduced the escape rate. Concluding, it is highly recommended that sea bass cages should be kept internally the culture array. Furthermore, the placement of artificial obstacles close to the sea cages could be an efficient practice that mitigates the escape risk after severe environmental conditions.

  19. Movements and behavior of largemouth bass (Micropterus salmoides) and steelhead (Salmo gairdneri) determined by radio telemetry

    Energy Technology Data Exchange (ETDEWEB)

    Winter, J.D.

    1976-08-01

    The organization of this thesis reflects the development of underwater radio tracking methodology for monitoring movements of freshwater fish. Equipment and techniques developed during this research are described in Part I and represent a cooperative effort between the author and the University of Minnesota's Cedar Creek engineering staff. In 1970, the equipment and techniques were tested and perfected during a study of largemouth bass movements in Mary Lake. The bass project provided an ideal situation to test the system. Since Mary Lake was small and the bass exhibited localized movements, the fish could be found easily; consequently, the performance of the system could be continually analyzed and problems could be quickly solved. The home range movements of the bass are described in Part II. After establishing the reliability and usefulness of the system, a much more difficult project was attempted. In 1971, a program was initiated to study the movements and behavior of steelhead in western Lake Superior. Results of this project (1971 to 1974) are presented in Part III.

  20. Preliminary survey of potato virus Y (PVy) strains in potato samples from Kurdistan (Iran).

    Science.gov (United States)

    Bahrami-Kamangar, S; De Jonghe, K; Kamangar, S; Maes, M; Smagghe, G

    2010-01-01

    Potato virus Y (PVY) is the type species in the potyvirus genus of the family potyviridae. This plant pathogenic virus is transmitted through plant sap inoculation by stem and core grafting and by at least 25 aphid species in a non-persistent manner. According to potato specialists in most parts of the world, PVY is currently considered as the most harmful virus in cultivated potatoes. This is also the case for potato production in Iran. In this project we investigated potato leaves that were collected in the Kurdistan province in Iran for the presence of PVY with use of different biochemical/molecular techniques as ELISA, RT-PCR and qPCR. The different PVY strains, including PVY-O, PVY-N, PVYN-TN, PVY-NWi, were determined by using a triplex RT-PCR. In conclusion, the results demonstrated the presence of PVY-NWi strains in the potato leaf samples from Kurdistan (Iran). The data are discussed in relation to prevalence of PVY strains in Iran.

  1. Surveys of potato-growing areas and surface water in Lebanon for potato brown and ring rot pathogens

    Directory of Open Access Journals (Sweden)

    Elia CHOUEIRI

    2017-05-01

    Full Text Available Field surveys were carried out over three growing seasons (2013–2015, in the main potato growing areas of Lebanon, to assess the occurrence of potato brown rot caused by Ralstonia solanacearum and potato ring rot caused by Clavibacter michiganensis subsp. sepedonicus. A total of 232 potato samples were collected from Bekaa valley and 145 samples from Akkar plain, which are the largest Lebanese areas cropped with potatoes. Composite samples of 200 potato tubers were randomly collected from each field, following procedures laid down in EU legislation. Twelve potato demonstration fields were established in Akkar plain and designed for potato export to European markets: these were also surveyed using the same strategy. Furthermore, a network of 40 sampling sites in Bekaa and 19 sites in Akkar was established to collect surface water. GPS coordinates of potato fields and water sampling sites were recorded to map specific sampling points using Geographic Information System. All samples gave negative results for R. solanacearum and C. michiganensis subsp. sepedonicus in potatoes and R. solanacearum in water, as indicated using the official EU methods for detection and diagnosis for these pathogens. A monitoring system for R. solanacearum and C. michiganensis subsp. michiganensis has been set up in Lebanon. This will increase the phytosanitary quality of potatoes and provide access to broader international markets.

  2. Kortfilmen i filmen : En studie i Saul Bass anpassning av förtexter till det individuella verket.

    OpenAIRE

    2007-01-01

    In this paper, I have examined if and how Saul Bass adapts his title sequences to the respective film in the matter of genre, plot, milieu, feeling and appearance. Saul Bass was really a graphic artist who has made himself a long career in film production, foremost as a creator of title sequences. Of all the films Bass has created title sequences to, I’ve chosen six films, whose title sequences I analyse more thoroughly. I do this to point out the differences between them and thus also show h...

  3. Effect of heat treatment to sweet potato flour on dough properties and characteristics of sweet potato-wheat bread.

    Science.gov (United States)

    Pérez, Isela Carballo; Mu, Tai-Hua; Zhang, Miao; Ji, Lei-Lei

    2017-01-01

    The effect of heat treatment at 90, 100, 110 and 120 ℃ for 20 min to sweet potato flour on dough properties and characteristics of sweet potato-wheat bread was investigated. The lightness (L*) and a* of sweet potato flour samples after heat treatment were increased, while the b* were decreased significantly, as well as the particle size, volume and area mean diameter ( p dough with sweet potato flour increased significantly from 1199 ml without heat treatment to 1214 ml at 90 ℃ ( p < 0.05). In addition, specific loaf volume of sweet potato-wheat bread with sweet potato flour after heat treatment increased significantly, which was the largest at 90 ℃ (2.53 cm(3)/g) ( p < 0.05). Thus, heat treatment at 90 ℃ to sweet potato flour could be potentially used in wheat bread production.

  4. Photoautotrophic micropropagation of Russet Burbank Potato

    NARCIS (Netherlands)

    Pruski, K.; Astatkie, T.; Mirza, M.; Nowak, J.

    2002-01-01

    The photoautotrophic micropropagation of potato cv. Russet Burbank was investigated. Single node microcuttings were grown for four weeks on Murashige and Skoog (MS) medium with or without sucrose (30 g l-1) in the growth room at 21/19 °C day/night temperature, with 16-h photoperiod at 150 μmol m-2 s

  5. Photoautotrophic micropropagation of Russet Burbank Potato

    NARCIS (Netherlands)

    Pruski, K.; Astatkie, T.; Mirza, M.; Nowak, J.

    2002-01-01

    The photoautotrophic micropropagation of potato cv. Russet Burbank was investigated. Single node microcuttings were grown for four weeks on Murashige and Skoog (MS) medium with or without sucrose (30 g l-1) in the growth room at 21/19 °C day/night temperature, with 16-h photoperiod at 150 μmol m-2 s

  6. Sweet Potato Ketchup: Feasibility, Acceptability, and Production ...

    African Journals Online (AJOL)

    product, in which up to 80% tomatoes were substituted with sweet potato, was found to be organoleptically ... formulation had little influence on the final pH, which ranged from 3.8 to 4.1. Titratable acidity ... system to add value to their produce;.

  7. Studies of Amylose Content in Potato Starch

    Science.gov (United States)

    Potato starch is typically low in amylose (~20-25%), but high amylose starch has superior nutritional qualities. The ratio between amylose and amylopectin is the most important property influencing the physical properties of starch. There is a strong case to be made for the development of food crops...

  8. Grower price effects of Innate™ potato

    Science.gov (United States)

    The revival of biotechnology applications for potato raises interesting economic questions that we examine here. Technologies of this sort increase supply by decreasing waste and reducing percentage of off-grade product. Increased supply leads, eventually, to reductions in the market price, so that ...

  9. Internal Ballistics of a Pneumatic Potato Cannon

    Science.gov (United States)

    Mungan, Carl E.

    2009-01-01

    Basic laws of thermodynamics and mechanics are used to analyse an air gun. Such devices are often employed in outdoor physics demonstrations to launch potatoes using compressed gas that is here assumed to expand reversibly and adiabatically. Reasonable agreement is found with reported muzzle speeds for such homebuilt cannons. The treatment is…

  10. Isolation of Mitochondria from Potato Tubers

    DEFF Research Database (Denmark)

    Havelund, Jesper F.; Salvato, Fernanda; Chen, Mingjie;

    2014-01-01

    the in vivo properties of the organelle inside the plant cell. Here, we describe a method to isolate mitochondria from a relatively homogeneous plant tissue, the dormant potato tuber. The homogenization is done using a juice extractor, which is a relatively gentle homogenization procedure where...

  11. Engineering resistance against potato virus Y.

    NARCIS (Netherlands)

    Vlugt, van der R.A.A.

    1993-01-01

    Potato virus Y is the type species of the potyvirus genus, the largest genus of the plant virus family Potyviridae. The virus causes serious problems in the cultivation of several Solanaceous crops and although certain poly- and monogenic resistances are available, these can not always be employed,

  12. Potato developments in a changing Europe

    NARCIS (Netherlands)

    Haase, N.U.; Haverkort, A.J.

    2006-01-01

    The papers in this book reflect societal and commercial changes such as consumer behaviour and marketing aspects in relation to fresh and processed potatoes in western, central and eastern Europe. Seed trade between western and central Europe is entering a new stage with altered inspection requireme

  13. Treated Wastewater Reuse on Potato (Solanum Tuberosum)

    DEFF Research Database (Denmark)

    Battilani, A; Plauborg, Finn; Andersen, Mathias Neumann

    2014-01-01

    ) was treated by Membrane Bio Reactor (MBR) technology and gravel filter (FTS) during three cropping seasons. Treated wastewater, soil and tubers were analysed for the faecal indicator bacterium E. coli and heavy metals contents. Potato total yield was similar for tap and reused water, while the marketable...

  14. Internal Ballistics of a Pneumatic Potato Cannon

    Science.gov (United States)

    Mungan, Carl E.

    2009-01-01

    Basic laws of thermodynamics and mechanics are used to analyse an air gun. Such devices are often employed in outdoor physics demonstrations to launch potatoes using compressed gas that is here assumed to expand reversibly and adiabatically. Reasonable agreement is found with reported muzzle speeds for such homebuilt cannons. The treatment is…

  15. An Online Potato Pedigree Database Resource

    NARCIS (Netherlands)

    Berloo, van R.; Hutten, R.C.B.; Eck, van H.J.; Visser, R.G.F.

    2007-01-01

    At the Laboratory of Plant Breeding of Wageningen University, a large amount of pedigree data on current and historic potato cultivars and progenitors has been collected over many years. The sources and reasons for collection of these data are discussed. To allow others to use this data set for

  16. Measurement error affects risk estimates for recruitment to the Hudson River stock of striped bass.

    Science.gov (United States)

    Dunning, Dennis J; Ross, Quentin E; Munch, Stephan B; Ginzburg, Lev R

    2002-06-07

    We examined the consequences of ignoring the distinction between measurement error and natural variability in an assessment of risk to the Hudson River stock of striped bass posed by entrainment at the Bowline Point, Indian Point, and Roseton power plants. Risk was defined as the probability that recruitment of age-1+ striped bass would decline by 80% or more, relative to the equilibrium value, at least once during the time periods examined (1, 5, 10, and 15 years). Measurement error, estimated using two abundance indices from independent beach seine surveys conducted on the Hudson River, accounted for 50% of the variability in one index and 56% of the variability in the other. If a measurement error of 50% was ignored and all of the variability in abundance was attributed to natural causes, the risk that recruitment of age-1+ striped bass would decline by 80% or more after 15 years was 0.308 at the current level of entrainment mortality (11%). However, the risk decreased almost tenfold (0.032) if a measurement error of 50% was considered. The change in risk attributable to decreasing the entrainment mortality rate from 11 to 0% was very small (0.009) and similar in magnitude to the change in risk associated with an action proposed in Amendment #5 to the Interstate Fishery Management Plan for Atlantic striped bass (0.006)--an increase in the instantaneous fishing mortality rate from 0.33 to 0.4. The proposed increase in fishing mortality was not considered an adverse environmental impact, which suggests that potentially costly efforts to reduce entrainment mortality on the Hudson River stock of striped bass are not warranted.

  17. Climate-induced seasonal changes in smallmouth bass growth rate potential at the southern range extent

    Science.gov (United States)

    Middaugh, Christopher R.; Kessinger, Brin; Magoulick, Daniel D.

    2016-01-01

    Temperature increases due to climate change over the coming century will likely affect smallmouth bass (Micropterus dolomieu) growth in lotic systems at the southern extent of their native range. However, the thermal response of a stream to warming climate conditions could be affected by the flow regime of each stream, mitigating the effects on smallmouth bass populations. We developed bioenergetics models to compare change in smallmouth bass growth rate potential (GRP) from present to future projected monthly stream temperatures across two flow regimes: runoff and groundwater-dominated. Seasonal differences in GRP between stream types were then compared. The models were developed for fourteen streams within the Ozark–Ouachita Interior Highlands in Arkansas, Oklahoma and Missouri, USA, which contain smallmouth bass. In our simulations, smallmouth bass mean GRP during summer months decreased by 0.005 g g−1 day−1 in runoff streams and 0.002 g g−1 day−1 in groundwater streams by the end of century. Mean GRP during winter, fall and early spring increased under future climate conditions within both stream types (e.g., 0.00019 g g−1 day−1 in runoff and 0.0014 g g−1 day−1 in groundwater streams in spring months). We found significant differences in change in GRP between runoff and groundwater streams in three seasons in end-of-century simulations (spring, summer and fall). Potential differences in stream temperature across flow regimes could be an important habitat component to consider when investigating effects of climate change as fishes from various flow regimes that are relatively close geographically could be affected differently by warming climate conditions.

  18. Measurement Error Affects Risk Estimates for Recruitment to the Hudson River Stock of Striped Bass

    Directory of Open Access Journals (Sweden)

    Dennis J. Dunning

    2002-01-01

    Full Text Available We examined the consequences of ignoring the distinction between measurement error and natural variability in an assessment of risk to the Hudson River stock of striped bass posed by entrainment at the Bowline Point, Indian Point, and Roseton power plants. Risk was defined as the probability that recruitment of age-1+ striped bass would decline by 80% or more, relative to the equilibrium value, at least once during the time periods examined (1, 5, 10, and 15 years. Measurement error, estimated using two abundance indices from independent beach seine surveys conducted on the Hudson River, accounted for 50% of the variability in one index and 56% of the variability in the other. If a measurement error of 50% was ignored and all of the variability in abundance was attributed to natural causes, the risk that recruitment of age-1+ striped bass would decline by 80% or more after 15 years was 0.308 at the current level of entrainment mortality (11%. However, the risk decreased almost tenfold (0.032 if a measurement error of 50% was considered. The change in risk attributable to decreasing the entrainment mortality rate from 11 to 0% was very small (0.009 and similar in magnitude to the change in risk associated with an action proposed in Amendment #5 to the Interstate Fishery Management Plan for Atlantic striped bass (0.006— an increase in the instantaneous fishing mortality rate from 0.33 to 0.4. The proposed increase in fishing mortality was not considered an adverse environmental impact, which suggests that potentially costly efforts to reduce entrainment mortality on the Hudson River stock of striped bass are not warranted.

  19. Oxidative ecology of paternal care in wild smallmouth bass, Micropterus dolomieu.

    Science.gov (United States)

    Elmer, Laura K; O'Connor, Constance M; Philipp, David P; Van Der Kraak, Glen; Gilmour, Kathleen M; Willmore, William G; Barthel, Brandon L; Cooke, Steven J

    2017-03-16

    Physiologically, oxidative stress is considered a homeostatic imbalance between reactive oxygen species production and absorption. From an ecological perspective, oxidative stress may serve as an important constraint to life history traits such as lifespan, reproduction, and the immune system, and is gaining interest as a potential mechanism underlying life history trade-offs. Of late, there has been much interest in understanding the role of oxidative stress in the ecology of wild animals, particularly during challenging periods such as reproduction. Here, we used a long-term study population of a fish with sole-male parental care, the smallmouth bass, Micropterus dolomieu, to examine the associations among oxidative stress indicators and life history variables in nest-guarding males. In addition, we investigated the potential role of oxidative stress as a physiological mediator of the life history trade-off decision of paternal smallmouth bass to stay with or abandon their brood. We found that oxidative stress was significantly related to the life history of paternal smallmouth bass, such that older, larger fish with greater reproductive experience and larger broods nesting in cooler water temperatures had lower levels of oxidative stress. However, we found no significant correlation between oxidative stress and nesting success, suggesting that oxidative stress may not be involved in the decision of male smallmouth bass to abandon their brood. Wild fish have been relatively understudied in the emerging field of oxidative ecology, and the study presented here makes noteworthy contributions by revealing interesting connections between the life histories of paternal smallmouth bass and their oxidative status.

  20. Diel behavior of adult striped bass using tailwater habitat as summer refuge

    Science.gov (United States)

    Young, S.P.; Isely, J.J.

    2007-01-01

    General patterns of summer diel distribution and movement were identified for adult striped bass Morone saxatilis using tailwater habitat influenced by the diel operation cycle of a hydroelectric dam during the summers of 2003 and 2004. Striped bass distribution within the tailwater was similar during each diel-tracking event and across both summers. The majority of fish remained within the tailwater the entire summer; however, some made periodic excursions to and from the tailwater throughout the summer. Further, most striped bass were located within 0.5 km of Richard B. Russell Dam during all stages of operation on all occasions - probably because of the constant availability of optimal habitat during all three stages of operation on all diel-tracking events. The diel cycle of dam operation, which included pumped storage during each summer, did not degrade tailwater habitat below optimal conditions, according to summer habitat suitability index values for inland adult striped bass. Movement was significantly higher during hydroelectric generation operations than during no-generation and pumped storage periods in summer 2003; this difference was not apparent during summer 2004. Mean absolute movement peaked during hydroelectric generation on six of eight diel-tracking events. During both summers, movement was directed up-reservoir during no-generation and generation periods and down-reservoir during pumped storage. Mean total daily movement rates ranged from 0.59 to 4.04 km/d and were greater than those previously estimated from bimonthly sampling for this population. Total daily movement rate peaked during the first tracking event each summer and then declined as summer progressed. These findings suggest that hydroelectric discharges affect adult striped bass behavior, but the effects are not adverse as long as habitat is not degraded by hydroelectric facility operations. ?? Copyright by the American Fisheries Society 2007.

  1. Evaluation of N-Nitrosamine Formation in Routine Potato Cooking

    Directory of Open Access Journals (Sweden)

    Qajarbeygi

    2015-08-01

    Full Text Available Background Nitrosamine is amongst carcinogen chemical compounds, which can enter the human body through consumption of food. Potatoes are a root vegetable consumed by many people around the world, however their potential for nitrosamine formation during cooking processes needs to be considered for public health matters. Objectives In this study we evaluated the effect of conventional potato cooking method on N-nitrosamine compound formation. Materials and Methods The amounts of four nitrosamines, namely N-nitrosodimethylamine (NDMA, N-nitrosodiethylamine (NDEA, N-nitrosopiperidine (NPIP and N-nitrosopyrrolidine (NPYR were determined in four different potato-baking methods. Sixty potato samples were randomly collected from Hamadan city. Fried potato samples were roasted at 180°C and boiled potato samples were scalded at 120°C. Nitrosamine levels were measured using gas chromatography coupled with electronic ionization detector (GC-EID, and spectrophotometry was used for measuring nitrite. Results Fried samples that were measured by the gas chromatography method had the highest average levels of nitrosamine compounds; NDMA, 5.09 ng kg-1, and NDEA, 8.66 ng kg-1. Low levels of nitrosamine compounds were associated with raw potatoes, in which no nitrosamine compound was detected. Based on the analysis of the potato samples by spectrophotometry, the highest levels of nitrite was found in raw potatoes with a mean of 2.43 mg kg-1 and the lowest levels of nitrite were detected in boiled potatoes with an average of 1.172 mg kg-1. Conclusions Nitrosamine was formed with conventional potato baking methods with the most nitrosamine formation found on the surface fried samples. Nitrites amount in baked potatoes decreased. Generally, the amount of nitrosamine in baked potato samples was lower than acceptable limits.

  2. Model approach for estimating potato pesticide bioconcentration factor.

    Science.gov (United States)

    Paraíba, Lourival Costa; Kataguiri, Karen

    2008-11-01

    We presented a model that estimates the bioconcentration factor (BCF) of pesticides in potatoes supposing that the pesticide in the soil solution is absorbed by the potato by passive diffusion, following Fick's second law. The pesticides in the model are nonionic organic substances, traditionally used in potato crops that degrade in the soil according to a first-order kinetic equation. This presents an expression that relates BCF with the pesticide elimination rate by the potato, with the pesticide accumulation rate within the potato, with the rate of growth of the potato and with the pesticide degradation rate in the soil. BCF was estimated supposing steady state equilibrium of the quotient between the pesticide concentration in the potato and the pesticide concentration in the soil solution. It is suggested that a negative correlation exists between the pesticide BCF and the soil sorption partition coefficient. The model was built based on the work of Trapp et al. [Trapp, S., Cammarano, A., Capri, E., Reichenberg, F., Mayer, P., 2007. Diffusion of PAH in potato and carrot slices and application for a potato model. Environ. Sci. Technol. 41 (9), 3103-3108], in which an expression to calculate the diffusivity of persistent organic substances in potatoes is presented. The model consists in adding to the expression of Trapp et al. [Trapp, S., Cammarano, A., Capri, E., Reichenberg, F., Mayer, P., 2007. Diffusion of PAH in potato and carrot slices and application for a potato model. Environ. Sci. Technol. 41 (9), 3103-3108] the hypothesis that the pesticide degrades in the soil. The value of BCF suggests which pesticides should be monitored in potatoes.

  3. Mitochondrial DNA evidences reflect an incipient population structure in Atlantic goliath grouper (Epinephelus itajara, Epinephelidae in Brazil

    Directory of Open Access Journals (Sweden)

    Júnio S. Damasceno

    2015-12-01

    Full Text Available The Atlantic goliath grouper is a critically endangered species that inhabits estuarine and reef environments and is threatened primarily by fishing activities and habitat destruction. Despite the urgent need for protection, its genetic conservation status remains unknown. The aim of the present study was to evaluate the gene flow among the populations of the species along the coast of Brazil based on the control region of the mitochondrial DNA. The results indicate low haplotype diversity (0.40-0.86 and very low nucleotide diversity (0.1-0.5%. They also show that the genetic diversity of the species varies considerably along the coast and that this finding may be especially important for the identification of priority areas for its conservation. The population analyses indicate a low but significant degree of genetic structuring (ΦST =0.111, probably due to the occurrence of rare haplotypes at some locations, although the genetic differentiation between sites was not correlated with geographic distance (r=0.0501; p=0.7719, and the shared haplotypes indicate that gene flow occurs among all locations along the Brazilian coast. The results of the pairwise FST indicate a high degree of genetic differentiation between locations. The incipient population structuring detected in the present study is not related systematically to the geological or physical features of the Brazilian coast. The complex interaction of fluctuations in sea level, marine currents, and the reproductive characteristics of the species hampers the identification of the specific role of each of these processes in the gene flow dynamics of the population units of the Atlantic goliath grouper. The low overall levels of genetic diversity, the pairwise FST values and the significant population structuring among groups (ΦCT identified in the present study all reinforce the critically endangered status of the species and are inconsistent with the presence of a single, panmictic

  4. Mercury and selenium concentrations in largemouth bass and other fishes of the Lower Suwannee National Wildlife Refuge

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — From March 22 to April 7, 1990, 71 largemouth bass (Micropterus salmoides) and four other fish species (total of seven fish) were collected from ten locations on or...

  5. Molecular Cloning and mRNA Profile of Insulin-like Growth Factor Type 1 Receptor in Orange-spotted Grouper, Epinephelus coioides

    Institute of Scientific and Technical Information of China (English)

    Yue-Mei KUANG; Wen-Sheng LI; Hao-Ran LIN

    2005-01-01

    The insulin-like growth factor type 1 receptor (IGF-IR) belongs to the tyrosine kinase (TK)receptor family. Besides being mitogenic, IGF-IR plays a crucial role in cell survival, transformation and maintenance of the malignant phenotype. In this study, we cloned the cDNA from the hypothalamus of the orange-spotted grouper (Epinephelus coioides) using reverse transcription PCR (RT-PCR) and the rapid amplification of cDNA ends (RACE) method. The deduced amino acid sequence showed that the receptor comprises 1413 amino acid residues. It contains cysteine-rich domains in its α-subunit, and a conserved transmembrane domain and TK domains in its β-subunit. Comparison of the amino acid sequence with those of other species showed that the grouper IGF-IR shares 90.2%, 89.6%, 71.9% and 72% similarity with the IGF-IR of the Japanese flounder, turbot, zebrafish-a and zebrafish-b, respectively. When compared with its mammalian homologue, grouper IGF-IR contains a large insertion at its C-terminus. Phylogenetic analysis has revealed that the grouper IGF-IR belongs to the b-type IGF-IRs and has a higher similarity with flounder and turbot IGF-IR, and a lower similarity (<70%) with human, mouse and avian IGF-IR. Grouper IGF-IR transcripts were detected in the brain, peripheral tissues, embryos and early development larvae by semi-quantitative RT-PCR assay. It was observed that IGF-IR mRNA expression was greater in the brain than in peripheral tissues. The level of IGF-IR mRNA expression was much higher in retina, gonad, skeletal muscle and gill tissues than in liver, heart and thymus tissues. The expression of IGF-IR can be visualized as a ubiquitous signalin unfertilized eggs, embryos and early development larvae. The distribution pattern of IGF-IR mRNA in grouper development suggests that IGF-IR plays an important role in the embryo and early larval development stages.

  6. Molecular characterization and functional analysis of TRAF6 in orange-spotted grouper (Epinephelus coioides).

    Science.gov (United States)

    Li, Yan-Wei; Li, Xia; Xiao, Xi-Xi; Zhao, Fei; Luo, Xiao-Chun; Dan, Xue-Ming; Li, An-Xing

    2014-05-01

    Tumor necrosis factor receptor (TNFR)-associated factor 6 (TRAF6) is a crucial signal transducer in both the TNFR superfamily and Toll-like receptor/interleukin 1R family. Although significant progress has been made in clarifying the role of TRAF6 in mammals, the function of TRAF6 in fish is still poorly understood. In this study, we cloned the orange-spotted grouper (Epinephelus coioides) TRAF6 (EcTRAF6) cDNA, with an open reading frame of 1713bp encoding 570 amino acids. Sequence analysis indicated that EcTRAF6 contains the four characteristic domains conserved in the TRAF family, including an N-terminal RING finger, two zinc fingers, a coiled-coil domain, and a C-terminal MATH domain. Homology alignment and phylogenetic analysis demonstrated that EcTRAF6 shares high sequence identity with TRAF6 of other fish species. The EcTRAF6 gene contains seven exons and six introns, which is similar to the organization in ayu, but not in the common carp, human, or mouse (six exons and five introns). EcTRAF6 transcripts were broadly expressed in all tissues tested, and increased after infection with Cryptocaryon irritans. Intracellular localization showed EcTRAF6 was distributed mainly in the cytoplasm. Over-expression of wild type (WT) EcTRAF6, truncated forms of EcTRAF6, including ΔZinc finger 2 and ΔMATH, and a mutant of C78A activated NF-κB strongly in HEK293T cells; whereas truncations, including ΔRING, ΔZinc finger 1 and Δcoiled-coiled, and a mutant of K132R induced the activity of NF-κB slightly compared to WT EcTRAF6, implying the latter has a more crucial role in downstream signal transduction. Together, these results suggested EcTRAF6 functions like that of mammals to activate NF-κB, and it might have an important role in host defense against parasitic infections.

  7. Suppression of the vacuolar invertase gene delays senescent sweetening in chipping potatoes

    Science.gov (United States)

    Background: Potato chip processors require potato tubers that meet quality specifications for fried chip color, and color depends largely upon tuber sugar contents. At later times in storage, potatoes accumulate sucrose, glucose and fructose. This developmental process, senescent sweetening, manifes...

  8. Long-term storage of irradiated potatoes for processing use, 4. Suitable storage conditions and potato chips processing test

    Energy Technology Data Exchange (ETDEWEB)

    Aoki, Shohei; Umeda, Keiji; Kameyama, Kenji

    1984-03-01

    In order to develop suitable storage conditions in potatoes for processing use, non-irradiated and irradiated potatoes var. Norin No. 1 were stored in containers and in bulk. The contents of reducing sugars were determined and the properties of potato chips were analysed. Reconditioning at 10 deg C and RH 90 % for 4 weeks during an early period of dormancy lowered the content of reducing sugars remarkably in both the non-irradiated and irradiated potatoes which were either stored in containers or in bulk. The optimum conditions for the storage of potatoes were 8 deg C and RH 90 %, which enabled the potatoes to retain their hardness while the content reducing sugars decreased. The potatoes stored under the above conditions gave chips with a fairly good color. In contrast, the non-irradiated potatoes stored for a period of 6 months or longer sprouted and aged, resulting in chips with unsatisfactory color. It was found necessary to use potatoes with low contents of both amino acids and reducing sugars to avoid the browning of chips. Bulk storage which was found to be effective for air circulation through potatoes caused creeping phenomenon. (author).

  9. Widespread occurrence of intersex in black basses (Micropterus spp.) from U.S. rivers, 1995-2004

    Science.gov (United States)

    Hinck, J.E.; Blazer, V.S.; Schmitt, C.J.; Papoulias, D.M.; Tillitt, D.E.

    2009-01-01

    Intersex occurrence in freshwater fishes was evaluated for nine river basins in the United States. Testicular oocytes (predominantly male testes containing female germ cells) were the most pervasive form of intersex observed, even though similar numbers of male (n = 1477) and female (n = 1633) fish were examined. Intersex was found in 3% of the fish collected. The intersex condition was observed in four of the 16 species examined (25%) and in fish from 34 of 111 sites (31%). Intersex was not found in multiple species from the same site but was most prevalent in largemouth bass (Micropterus salmoides; 18% of males) and smallmouth bass (M. dolomieu; 33% of males). The percentage of intersex fish per site was 8-91% for largemouth bass and 14-73% for smallmouth bass. The incidence of intersex was greatest in the southeastern United States, with intersex largemouth bass present at all sites in the Apalachicola, Savannah, and Pee Dee River Basins. Total mercury, trans-nonachlor, p,p???-DDE, p,p???-DDD, and total PCBs were the most commonly detected chemical contaminants at all sites, regardless of whether intersex was observed. Although the genotype of the intersex fish was not determined, the microscopic appearance of the gonads, the presence of mature sperm, and the concentrations of sex steroid hormones and vitellogenin indicate the intersex bass were males. Few reproductive endpoints differed significantly among male and intersex bass; plasma vitellogenin concentration in males was not a good indicator of intersex presence. Hierarchical linkages of the intersex condition to reproductive function will require a more quantitative measure of intersex (e.g. severity index) rather than presence or absence of the condition. The baseline incidence of intersex gonadal tissue in black basses and other freshwater fishes is unknown, but intersex prevalence may be related to collection season, age, and endocrine active compounds in the environment. Intersex was not found in

  10. Use of Electrical Penetration Graph Technology to Examine Transmission of ‘Candidatus Liberibacter solanacearum’ to Potato by Three Haplotypes of Potato Psyllid (Bactericera cockerelli; Hemiptera: Triozidae)

    Science.gov (United States)

    The potato psyllid, Bactericera cockerelli (Šulc) (Hemiptera: Triozidae), is a vector of the phloem-limited bacterium ‘Candidatus Liberibacter solanacearum’ (Lso), the putative causal agent of zebra chip disease of potato. Little is known about how potato psyllid transmits Lso to potato. We used ele...

  11. Acetic acid pretreatment improves the hardness of cooked potato slices.

    Science.gov (United States)

    Zhao, Wenlin; Shehzad, Hussain; Yan, Shoulei; Li, Jie; Wang, Qingzhang

    2017-08-01

    The effects of acetic acid pretreatment on the texture of cooked potato slices were investigated in this work. Potato slices were pretreated with acetic acid immersion (AAI), distilled water immersion (DWI), or no immersion (NI). Subsequently, the cell wall material of the pretreated samples was isolated and fractioned to evaluate changes in the monosaccharide content and molar mass (MM), and the hardness and microscopic structure of the potato slices in different pretreatments before and after cooking were determined. The results showed that the highest firmness was obtained with more intact structure of the cell wall for cooked potato slices with AAI pretreatment. Furthermore, the MM and sugar ratio demonstrated that the AAI pretreated potato slices contained a higher content of the small molecular polysaccharides of cell walls, especially in the hemicellulose fraction. This work may provide a reference for potato processing. Copyright © 2017 Elsevier Ltd. All rights reserved.

  12. Abundance and Distribution of Walleye, Northern Squawfish and Smallmouth Bass in John Day Reservoir and Tailrace, 1984 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Nigro, Anthony A.; Faler, Michael P.; Elliott, John C. (Oregon Department of Fish and Wildlife, Columbia River Section, John Day, OR)

    1985-06-01

    Walleye, northern squawfish and smallmouth bass abundances were estimated in John Day Reservoir using a modified Schnabel multiple mark and recapture estimator. Sampling was conducted from March 25 to August 31 using gill nets, trap nets, boat electrofishing, angling and an angler survey. A total of 858 walleye, 4552 northern squawfish, and 1599 smallmouth bass were collected. Discrete populations were defined according to observed movements of recaptured and radiotagged fish. Abundance estimates were corrected for angler harvest, size selectivity of gear, tag loss and recruitment due to growth during sampling. In addition, the likelihood of biases resulting from differential mortality of marked fish was examined. Abundances in John Day pool of walleye and northern squawfish with fork lengths greater than 250 mm were estimated at 15,832 and 80,486. Abundances of smallmouth bass with fork lengths greater than 200 mm were estimated to be 2596 in lower John Day pool and 1791 in upper John Day pool. Walleye and northern squawfish moved throughout the pool, whereas movements by smallmouth bass were more localized. Angler harvests of walleye and smallmouth bass in upper John Day pool from April through August were estimated at 309 and 584 fish. Angler harvest of northern squawfish was negligible. Most walleye collected were age 5. The most abundant age groups of northern squawfish and smallmouth bass were 10 and 2. 10 refs., 28 figs., 12 tabs.

  13. Inhibition of cytochrome p450 enzymes by enrofloxacin in the sea bass (Dicentrarchus labrax).

    Science.gov (United States)

    Vaccaro, E; Giorgi, M; Longo, V; Mengozzi, G; Gervasi, P G

    2003-01-10

    Currently, there are no reports on the effects of enrofloxacin (EF), a fluoroquinolone antibiotic, on the cytochrome p450 enzymes in fish, although its use as antimicrobial agent in aquaculture has been put forward. Therefore, the in vivo and in vitro effects of EF on hepatic p450 enzymes of sea bass, a widespread food-producing fish, have been evaluated. Sea bass pretreated with a single dose of EF (3 mg/kg i.p.) or with three daily doses of EF (1 mg/kg i.p.) markedly depressed the microsomal N-demethylation of aminopyrine, erythromycin, the O-deethylation of 7-ethoxycoumarin, ethoxyresorufin and the 6beta-testosterone hydroxylase. In vitro experiments showed that EF at 10 microM inhibited the above-mentioned activities and, in particular, the erythromycin N-demethylase (ERND) and 6beta-testosterone-hydroxylase, likely dependant on a p450 3A isoform. When the nature of ERND inhibition by EF was specifically studied with sea bass liver microsomes, it was found that EF is a potent mechanism-based inhibitor, with K(i) of 3.7 microM and a K(inact) of 0.045 min(-1). An immunoblot analysis with anti p450 3A27 of trout showed that the p450 3A isoform, constitutively expressed in sea bass, is particularly susceptible to inactivation by EF. In vitro experiments with sea bass microsomes have also demonstrated that EF is oxidative deethylated by the p450 system to ciprofloxacin (CF) and that this compound maintains the ability to inactivate the p450 enzymes. The mechanism by which EF or CF inactivate the p450 enzymes has not been studied but an attack of p450 on the cyclopropan ring, present, both in EF and CF structure, with the formation of electrophilic intermediates (i.e. radicals) has been postulated. In conclusion, the EF seems to be a powerful inhibitor of p450s in the sea bass. Therefore, the clinical use of this antibiotic in aquaculture has to be considered with caution.

  14. Study on potato virus M (PVM) occurrence in potato fields in Iran.

    Science.gov (United States)

    Mosahebi, G; Koohi-Habibi, M; Okhovvat, S M

    2005-01-01

    57 native potato tuber samples collected from different potato growing region of Iran, planted on single rows in Karaj College experimental station. Plant samples of each single row plus 9.25 Fresh foliage samples collected from fields under new introduced cultivars were tested for potato virus (PVM) infection during growing season. Also 78 weeds and field crops belonging to Solonacae and Leguminosae from or neighboring to potato field were tested. Results indicated that PVM was not found on any plant other than potatoes. PVM was detected on 16 samples of 57 old vars, Virus was not seen in any samples collected from fields under new varieties. Results show that PVM is limiting in this crop. PVM detecting is difficult using assay hosts. Best test plants were French bean var Red kidney, Showing pinpoint necrotic LL, also Datura metel and Nicotiana debneyi are useful for virus detection showing chlorotic local lesion. Also microprecipition and gel diffusion test can be used for virus detection but Elisa was the best method. PVM infected plant showed 11-19.5 percent yield decrease in 3 cultivars tested.

  15. [Cloning and promoter analysis of gonadotrophin-releasing hormone Ⅱ in the orange-spotted grouper (Epinephelus coioides)].

    Science.gov (United States)

    Chen, Ji; Luo, Yu-Shan; Zhu, Zuo-Yan; Hu, Wei

    2013-07-01

    Gonadotrophin-releasing hormone (GnRH) is a key regulator of reproduction in all vertebrates. We first cloned the cDNA and genomic DNA sequences coding for GnRHⅡ gene in the orange-spotted grouper (Epinephelis coioides), an economically important marine fish, and then cloned its promoter sequence. The region responsible for the cell-specific expression of GnRHⅡ was located between -2005 bp to -956 bp from the translation start site. GnRHⅡ promoter driven EGFP expression in transgenic zebrafish showed that GnRHⅡ-positive neurons were primarily located in the midbrain and in the eyes. Our results provide an improved understanding of the regulatory mechanism and function of GnRHⅡ of E. coioides.

  16. Identification of the Bcl-2 family protein gene BOK from orange-spotted grouper (Epinephelus coioides) involved in SGIV infection.

    Science.gov (United States)

    Cai, Jia; Yu, Dapeng; Wei, Shina; Tang, Jufen; Lu, Yishan; Wu, Zaohe; Qin, Qiwei; Jian, Jichang

    2016-05-01

    Apoptosis plays vital roles in many physiological process and immune response. BOK is one of the central regulators in apoptosis. In this study, a new BOK homolog (Ec-BOK) was cloned and characterized from Orange-spotted grouper, Epinephelus coioides. Ec-BOK encoded a 210 amino acid peptides which shared 97% identity to Stegastes partitus BOK protein, contained four BH domains and one transmembrane region. Ec-BOK widely expressed in all analyzed tissues with the higher expressions in kidney and spleen. Its expression level was up-regulated after SGIV infection in vitro. Further analysis revealed that overexpression of Ec-BOK inhibited viral genes transcriptions and virus replication in fish cell. Our findings suggested that Ec-BOK might play a role in the immune response against virus.

  17. Susceptibility of Chinese Perch Brain (CPB) Cell and Mandarin Fish to Red-Spotted Grouper Nervous Necrosis Virus (RGNNV) Infection.

    Science.gov (United States)

    Tu, Jiagang; Chen, Wenjie; Fu, Xiaozhe; Lin, Qiang; Chang, Ouqin; Zhao, Lijuan; Lan, Jiangfeng; Li, Ningqiu; Lin, Li

    2016-05-19

    Nervous necrosis virus (NNV) is the causative agent of viral encephalopathy and retinopathy (VER), a neurological disease responsible for high mortality of fish species worldwide. Taking advantage of our established Chinese perch brain (CPB) cell line derived from brain tissues of Mandarin fish (Siniperca chuatsi), the susceptibility of CPB cell to Red-Spotted Grouper nervous necrosis virus (RGNNV) was evaluated. The results showed that RGNNV replicated well in CPB cells, resulting in cellular apoptosis. Moreover, the susceptibility of Mandarin fish to RGNNV was also evaluated. Abnormal swimming was observed in RGNNV-infected Mandarin fish. In addition, the cellular vacuolation and viral particles were also observed in brain tissues of RGNNV-infected Mandarin fish by Hematoxylin-eosin staining or electronic microscopy. The established RGNNV susceptible brain cell line from freshwater fish will pave a new way for the study of the pathogenicity and replication of NNV in the future.

  18. Susceptibility of Chinese Perch Brain (CPB Cell and Mandarin Fish to Red-Spotted Grouper Nervous Necrosis Virus (RGNNV Infection

    Directory of Open Access Journals (Sweden)

    Jiagang Tu

    2016-05-01

    Full Text Available Nervous necrosis virus (NNV is the causative agent of viral encephalopathy and retinopathy (VER, a neurological disease responsible for high mortality of fish species worldwide. Taking advantage of our established Chinese perch brain (CPB cell line derived from brain tissues of Mandarin fish (Siniperca chuatsi, the susceptibility of CPB cell to Red-Spotted Grouper nervous necrosis virus (RGNNV was evaluated. The results showed that RGNNV replicated well in CPB cells, resulting in cellular apoptosis. Moreover, the susceptibility of Mandarin fish to RGNNV was also evaluated. Abnormal swimming was observed in RGNNV-infected Mandarin fish. In addition, the cellular vacuolation and viral particles were also observed in brain tissues of RGNNV-infected Mandarin fish by Hematoxylin-eosin staining or electronic microscopy. The established RGNNV susceptible brain cell line from freshwater fish will pave a new way for the study of the pathogenicity and replication of NNV in the future.

  19. Corticosteroid biosynthesis in vitro by testes of the grouper (Epinephelus coioides) after 17alpha-methyltestosterone-induced sex inversion.

    Science.gov (United States)

    Lee, S T; Lam, T J; Tan, C H

    2000-11-01

    This study reports the unique compartmentalization of cortisol and 11-deoxycortisol biosynthesis in vitro from [(3)H]17alpha-hydroxyprogesterone (17P) in testicular tissues of groupers after sex inversion induced by 17alpha-methyltestosterone (MT). Before MT implantation, the ovarian tissues produced only nonpolar metabolites. Following sex inversion some 6 months later, synthesis of these nonpolar metabolites was not detectable. Instead, cortisol and 11-deoxycortisol, with yields of about 3% and 14%, respectively, were synthesized together with two other polar metabolites. The corticosteroids and polar metabolites were distinctly nondetectable in ovarian tissues of the control fish throughout the experiment. While the significance of this testicular synthesis of corticosteroids is presently unclear, it could be related to the increased energy demands arising from the reorganization of gonadal tissues during sex inversion.

  20. Fish and fisher behaviour influence the vulnerability of groupers (Epinephelidae) to fishing at a multispecies spawning aggregation site

    Science.gov (United States)

    Robinson, J.; Graham, N. A. J.; Cinner, J. E.; Almany, G. R.; Waldie, P.

    2015-06-01

    Targeted fishing of spawning aggregations is a major contributor to extinction risk in numerous species of grouper (Epinephelidae). Marine reserves are often used to protect spawning aggregation sites, including multispecies sites shared by several species of grouper. However, marine reserves may be biologically, socioeconomically or culturally unviable in some fisheries, and alternative management actions must be explored. Implementing effective management actions that control rather than prohibit fishing requires an improved understanding of how species vary in their vulnerability to fishing gears and respond to changes in fishing effort. To estimate sources of variability in vulnerability to fishing (i.e. catchability), catch-per-unit-effort (CPUE) and other fisheries data were collected in parallel with underwater visual census-derived estimates of aggregation size at a multispecies spawning site of Epinephelus fuscoguttatus and E. polyphekadion. Despite having similar abundances, E. polyphekadion was eightfold more vulnerable to capture by hook-and-line gear, clearly outcompeting its congener for bait. Contrasting with the common assumption of a proportional relationship, the CPUE of both species was unrelated to the size of their respective aggregations. Moreover, the CPUE of each species was unrelated to hook size and depth fished. However, E. polyphekadion CPUE declined as the density of fishing effort increased at the site, with gear saturation identified as the likely mechanism for this effect. E. fuscoguttatus CPUE was negatively related to the size of aggregations formed by its congener, stemming from the superior competitiveness and therefore higher selectivity of the gear for E. polyphekadion. Our findings demonstrate that CPUE is an unreliable indicator of spawning aggregation status. The other sources of variation in CPUE that we identify have implications for gear-based management, which must be based on understanding of gear selectivity for

  1. Cathepsin L in the orange-spotted grouper, Epinephelus coioides: molecular cloning and gene expression after a Vibrio anguillarum challenge.

    Science.gov (United States)

    Liang, Jing-Zhen; Rao, Ying-Zhu; Lun, Zhao-Rong; Yang, Ting-Bao

    2012-12-01

    The orange-spotted grouper, Epinephelus coioides, is an important fish maricultured in many Asian countries. In the present study, the full-length cDNA of cathepsin L, an immunity related gene of fishes, was isolated from E. coioides using rapid amplification of cDNA ends (RACE). It is 1,443 bp in length, including an open reading frame (ORF) of 1,011 bp. The open reading frame encoded a preproprotein of 336 amino acids (aa), which consisted of a signal peptide of 16 aa, a proregion peptide of 98 aa and a mature peptide of 222 aa. The preproprotein contained an oxyanion hole (Gln), a catalytic triad formed by Cys, His and Asn, and the conserved ERWNIN, GNFD and GCNGG motifs, all characteristic of cathepsin L. Homology analysis revealed that the deduced amino acid sequence of E. coioides cathepsin L shared 80.1-94.8 % identity with those of reported fishes. Tissue-dependent mRNA expression analysis showed that the cathepsin L transcript was expressed in all the examined tissues of the healthy E. coioides, being highest in the liver and moderate in the heart, gonad and intestine. After Vibrio anguillarum stimulation, the mRNA expression of cathepsin L in E. coioides was significantly increased in the skin, fin, gills, liver, blood, spleen, head kidney and intestine, with the highest observed in the spleen (10.6-fold) at 12 h post-injection and the next in blood (7.5-fold) at 8 h post-injection. These results provided initial information for further studies on the physiological and immunological roles of the cathepsin L gene in the orange-spotted grouper.

  2. Application of biomarkers in Epaulet grouper (Epinephelus stoliczkae) to assess chromium pollution in the Chabahar Bay and Gulf of Oman

    Energy Technology Data Exchange (ETDEWEB)

    Sadeghi, Parvin, E-mail: parvin.sadeghi@gmail.com [Marine Biology Department, Marine Science Faculty, Chabahar Maritime University, Chabahar (Iran, Islamic Republic of); Kazerouni, Faranak [Department of Laboratory Medicine, Faculty of Paramedical Sciences, Shahid Beheshti University of Medical Sciences, Tehran (Iran, Islamic Republic of); Savari, Ahmad; Movahedinia, Abdolali; Safahieh, Alireza [Marine Biology Department, Marine and Oceanic Science Faculty, Khorramshahr University of Marine Science and Technology, Khorramshahr (Iran, Islamic Republic of); Ajdari, Daniel [Iranian Fisheries Research Organization, Tehran (Iran, Islamic Republic of)

    2015-06-15

    In the present study plasma levels of erythropoietin (EPO) hormone and kidney histological changes were assessed as biomarkers to evaluate the chromium pollution in Epaulet grouper (Epinephelus stoliczkae) obtained from different areas in Chabahar Bay and Gulf of Oman. Chemical analyses included the evaluation of chromium in the fish kidney tissue and sediment. The highest and lowest concentrations of chromium were measured in the kidney of fish and sediment collected from Konarak (47.53 ± 1.23 and 110 ± 1.4 μg g{sup –1}) and the mouth of Chabahar Bay (3.43 ± 1.31 and 13.5 ± 3.23 μg g{sup –1}), respectively. There was significant difference (P < 0.05) of EPO plasma levels between Konarak, Beris and Ramin stations with the mouth of Chabahar Bay as the cleanest station. Reduction of Bowman's space, occlusion of the tubule lumen, leukocytes infiltration, melanomacrophage centers aggregation, nuclear vacuolation, nuclei hypertrophy of tubule cells, necrosis of the tubules, lifting of the tubular basement membrane and dilatation of glomerular capillaries were the most alterations observed in the kidney. The HAI values of Epaulet grouper from Konarak, Beris and Ramin stations were significantly higher than other stations (P < 0.05). It was concluded that selected biomarkers as a first investigation could be useful tools to environmental biomonitoring programs. - Highlights: • Plasma EPO level and kidney HAI were assessed as Cr biomarkers in E. stoliczkae. • Chromium was measured in the sediment and kidney of E. stoliczkae in the Gulf of Oman. • Highest Cr concentration was in the sediment and E. stoliczkae kidney from Konarak. • The analyzed biomarkers in E. stoliczkae are suitable to monitor Cr pollution.

  3. Ozone injury and infection of potato leaves by Botrytis cinerea

    Energy Technology Data Exchange (ETDEWEB)

    Manning, W.J.; Feder, W.A.; Perkins, I.; Glickman, M.

    1969-09-01

    Symptoms of ozone injury were observed on older leaves of potato cultivars Norland and Katahdin under experimental conditions. This symptom expression closely resembled flecks observed on potato leaves also blighted by Botrytis cinerea in the field. Inoculation of ozone-injured and noninjured potato leaves with B. cinerea showed that infection was more rapid and disease development more severe on ozone-injured leaves. Infection was frequently observed to originate in ozone-injured leaf areas. Ozone injury, under experimental conditions, appeared to increase the susceptibility of potato leaves to infection by B. cinerea. 6 references.

  4. THE STATISTICAL INDICATORS OF POTATO PRODUCED IN ROMANIA

    Directory of Open Access Journals (Sweden)

    Elena BULARCA

    2013-12-01

    Full Text Available In this study we have analyzed and interpreted the main statistical indicators of potato produced in Romania. First of all, we start by presenting some information about potatoes: origin and appearance, their importance and necessity in the life of people and animals. Then on the basis of the specific statistical indicators, it was interpreted the evolution of the cultivated area, the percentage of the main counties in the cultivated area with potatoes, the average yield per hectare, as well as the import and export of potatoes in a given period. Each indicator was analyzed and corresponding remarks and conclusions have been drawn.

  5. DETERMINATION OF THE GLYCOALKALOIDS CONTENT FROM POTATO TUBERCULES (SOLANUM TUBEROSUM

    Directory of Open Access Journals (Sweden)

    NORGIA WIDMANN

    2013-12-01

    Full Text Available Determinations concerning the glycoalkaloids content were made over four potato varieties (Hansa, Sieglinde, Nicola and Linda obtained from a private German source, country in which potatoes are cultivated and consumed frequently. Potatoes have been cultivated in classic conditions, as well as in biodynamic conditions.The glycoalkaloids complex and their aglycones had been obtained through a sequence of operations, like extractions with several specific solvents at reflux and in backward flow, hydrolysis, lyophilisation etc.The determinations concerning the glycoalcaloids content of the four studied potato varieties were accomplished comparatively for both culture modes, in classic and biodynamic conditions.

  6. Use of biotechnological methods in the potato seed production

    Directory of Open Access Journals (Sweden)

    Janet Igarza Castro

    2012-01-01

    Full Text Available Potato crop has a large economic importance. Worldwide, propagation of potato by in vitro culture of axillary buds is commonly used in the production of in vitro plants and microtubers. These constitute the core plant material of a production program of potatoes seeds. This study aimed to present a review of scientific literature on the potato propagation by biotechnological methods. This also describes the main characteristics of this crop and the tuberization processes under natural and in vitro conditions. Key words: in vitro plants, microtubers, minitubers, Temporary Inmmersion System.

  7. Purification and characterization of potato leafroll virus.

    Science.gov (United States)

    Rowhani, A; Stace-Smith, R

    1979-10-15

    Potato leafroll virus (PLRV) was purified from infected potato (Solanum tuberosum L.) with yields of 0.4-0.6 mg/kg of foliage. The virus sedimented as a single component of 127 S. An antiserum prepared against purified virus had a maximum titer of 1:1024 in agar gel double diffusion tests. PLRV had a buoyant density of 1.39 g/ml and an estimated nucleic acid content of 28%. The nucleic acid had a molecular weight of 2.0 x 10(6) and was degraded by RNase but not by DNase, indicating that the PLRV nucleic acid is RNA. The sedimentation coefficient of the RNA molecule was 34.5 S and after treatment with formaldehyde, 20.7 S. Dissociated coat protein migrated as a single band in polyacrylamide gel electrophoresis and the average subunit molecular weight was 26,300. PLRV should be considered a member of the luteovirus group.

  8. [Species identification of grouper and snapper in Taiwan Strait using polymerase chain reaction-restriction fragment length polymorphism analysis and lab-on-a-chip system].

    Science.gov (United States)

    Chen, Shuangya; Zhang, Jin; Chen, Weiling; Xu, Dunming; Zhou, Yu

    2011-07-01

    Polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP) analysis and lab-on-a-chip system were used to identify grouper and snapper species in Taiwan Strait. A fragment of 464 bp length of mitochondrial cytochrome b gene was amplified by PCR and the products were digested with restriction enzymes Dde I , Hae III and NLa III, individually. The fragments generated after digestion were further resolved on the DNA Chip. Eight grouper species and five snapper species were successfully identified. The results demonstrated that PCR-RFLP analysis and lab-on-a-chip system provide a fast, easy, automated, and reliable analysis approach. This approach is potential for the purpose of fish adulteration control.

  9. Taxonomy Icon Data: potato [Taxonomy Icon

    Lifescience Database Archive (English)

    Full Text Available potato Solanum tuberosum Solanum_tuberosum_L.png Solanum_tuberosum_NL.png Solanum_tuber...osum_S.png Solanum_tuberosum_NS.png http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Solanum+tuberosum&t...=L http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Solanum+tuberosum&t=NL http://biosciencedbc.jp/taxonomy_...icon/icon.cgi?i=Solanum+tuberosum&t=S http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Solanum+tuberosum&t=NS ...

  10. Potato cv. Romano reaction to primary and secondary infection with potato necrotic strain Y virus (PVYNTN

    Directory of Open Access Journals (Sweden)

    Drago Milošević

    2015-01-01

    Full Text Available Primary and secondary infections with PVYNTN were investigated on forty plants of the potato cv. Romano inoculated in a greenhouse in Serbia in 2012 and 2013. PVY isolates were collected from the potato growing region of Čačak and identified by ELISA and RT-PCR methods. The sequence of the Serbian isolate 3D (Acc. No. KJ946936 showed 100% match with seven PVY isolates deposited in GenBank and described as NTN. A significant difference was detected between PVYNTN symptoms exibited on leaves of the cv. Romano under primary and secondary infections. The findings are significant because they are based on symptoms observed, so that it is clear that there are two distinct types of infection: primary and secondary. Symptoms of primary and secondary infection were the same on potato tubers and had the form of necrotic rings.

  11. Evidence of estrogenic endocrine disruption in smallmouth and largemouth bass inhabiting Northeast U.S. national wildlife refuge waters: A reconnaissance study.

    Science.gov (United States)

    Iwanowicz, L R; Blazer, V S; Pinkney, A E; Guy, C P; Major, A M; Munney, K; Mierzykowski, S; Lingenfelser, S; Secord, A; Patnode, K; Kubiak, T J; Stern, C; Hahn, C M; Iwanowicz, D D; Walsh, H L; Sperry, A

    2016-02-01

    Intersex as the manifestation of testicular oocytes (TO) in male gonochoristic fishes has been used as an indicator of estrogenic exposure. Here we evaluated largemouth bass (Micropterus salmoides) or smallmouth bass (Micropterus dolomieu) form 19 National Wildlife Refuges (NWRs) in the Northeast U.S. inhabiting waters on or near NWR lands for evidence of estrogenic endocrine disruption. Waterbodies sampled included rivers, lakes, impoundments, ponds, and reservoirs. Here we focus on evidence of endocrine disruption in male bass evidenced by gonad histopathology including intersex or abnormal plasma vitellogenin (Vtg) concentrations. During the fall seasons of 2008-2010, we collected male smallmouth bass (n=118) from 12 sites and largemouth bass (n=173) from 27 sites. Intersex in male smallmouth bass was observed at all sites and ranged from 60% to 100%; in male largemouth bass the range was 0-100%. Estrogenicity, as measured using a bioluminescent yeast reporter, was detected above the probable no effects concentration (0.73ng/L) in ambient water samples from 79% of the NWR sites. Additionally, the presence of androgen receptor and glucocorticoid receptor ligands were noted as measured via novel nuclear receptor translocation assays. Mean plasma Vtg was elevated (>0.2mg/ml) in male smallmouth bass at four sites and in male largemouth bass at one site. This is the first reconnaissance survey of this scope conducted on US National Wildlife Refuges. The baseline data collected here provide a necessary benchmark for future monitoring and justify more comprehensive NWR-specific studies.

  12. Studies for Somatic Embryogenesis in Sweet Potato

    Science.gov (United States)

    Bennett, J. Rasheed; Prakash, C. S.

    1997-01-01

    The purpose of this study was to improve the somatic embryo (SE) system for plant production of sweet potato (Ipomoea batatas L(Lam)). Explants isolated from SE-derived sweet potato plants were compared with control (non SE-derived) plants for their competency for SE production. Leaf explants were cultured on Murashige-Skoog (MS) medium with 2,4-dichlorophenoxy acetic acid (0.2 mg/L) and 6-benzylaminopurine (2.5 mg/L) for 2 weeks in darkness and transferred to MS medium with abscisic acid (2.5 mg/L). Explants isolated from those plants developed through somatic embryogenesis produced new somatic embryos rapidly and in higher frequency than those isolated from control plants They also appeared to grow faster in tissue culture than the control plants. Current studies in the laboratory are examining whether plants derived from a cyclical embryogenesis system (five cycles) would have any further positive impact on the rapidity and frequency of somatic embryo development. More detailed studies using electron microscopy are expected to show the point of origin of the embryos and to allow determination of their quality throughout the cyclical process. This study may facilitate improved plant micropropagation, gene transfer and germplasm conservation in sweet potato.

  13. Valorization of potato peel: a biorefinery approach.

    Science.gov (United States)

    Pathak, Pranav D; Mandavgane, Sachin A; Puranik, Nikhil Manoj; Jambhulkar, Swapnil Jaygopal; Kulkarni, Bhaskar D

    2017-06-14

    Potato is the fourth main crop consumed worldwide and is an important constituent in the human diet. Consequently, potato is widely used in food-processing industries. However, these industries generate massive amounts of potato peel (PP) as a by-product, which is usually considered a waste, and is discarded. Interestingly, recent research suggests that PP is a valuable source of bioactive compounds, which can be converted into value-added products. In this study, we review the physicochemical composition and valorization of PP. In addition to being used as a dietary fiber or medicine, the value-added products obtained by the fermentation of PP have multiple uses, including their use as adsorbents, biocomposites and packaging materials. These products can also be used in energy production, biopolymer film development, corrosion inhibition and the synthesis of cellulose nanocrystals. The biorefinery approach for PP will increase the value of this waste by producing an array of value-added products and reducing extensive waste generation.

  14. Day-night and reproductive cycle profiles of melatonin receptor, kiss, and gnrh expression in orange-spotted grouper (Epinephelus coioides).

    Science.gov (United States)

    Chai, Ke; Liu, Xiaochun; Zhang, Yong; Lin, Haoran

    2013-07-01

    It is suggested that the MT1 melatonin receptor mediates the effects of melatonin on reproduction in rodents. Three melatonin receptor types, MT1, MT2, and Mel1c, have been identified in fish. To understand the potential roles of each type of melatonin receptor on reproduction, we explored the day-night and reproductive cycle profiles of melatonin receptor, kiss, and gnrh expression in the orange-spotted grouper (Epinephelus coioides). cDNAs encoding melatonin receptors (MT1, MT2, and Mel1c) were first isolated from the brain of the orange-spotted grouper. Quantitative real-time PCR analysis demonstrated that the expression levels of MT1 and MT2 were higher in most of the brain areas and pituitary, while mel1c mRNA was mainly distributed in some peripheral tissues and the pituitary. The expression levels of MT1 were much higher than those of MT2 and mel1c in most of the brain regions, and the day-night expression variations of MT1 were counter to those of kiss2 and gnrh1. Reproductive cycle variations in MT1 daytime expression were different from those for kiss2 and gnrh1, and contrary to ovarian fecundity. Our results suggest that MT1 may modulate gnrh1 expression through kiss2, or may directly influence it. Together, these signal cascades may regulate the seasonal breeding of the orange-spotted grouper. As the day-length variations were consistent with the ovarian fecundity variation observed during the reproductive cycle, we infer that photoperiod affects ovarian development of the orange-spotted grouper through MT1.

  15. A new host record of Sphaerospora epinepheli (Myxosporea: Bivalvulida) occurring on orange-spotted grouper Epinephelus coioides from Thailand: epidemiology, histopathology and phylogenetic position.

    Science.gov (United States)

    U-taynapun, Kittichon; Chirapongsatonkul, Nion; Maneesaay, Phudit; Itami, Toshiaki; Tantikitti, Chutima

    2012-09-10

    In 1991, the first record of Sphaerospora epinepheli was described as a kidney parasite of wild and cultured malabar grouper, Epinephelus malabaricus, along coastlines of Thailand, the Gulf of Thailand and the Andaman Sea. However, the present study detected high infection of this parasite in kidney renal tubes of orange spotted grouper, Epinephelus coioides, collected from Andaman Sea. The highest infection rate of 36.82% was observed during the rainy season in 2009 in Phang-Nga Bay, in the north of Andaman Sea, which is an important grouper production site in Thailand. The biological and histopathological data of the parasite in this new host record are presented. Species classification is described based on morphological data of mature spore and molecular analysis of myxosporean 18S rDNA phylogeny including that of S. epinepheli which infected E. malabaricus. The genetic position of this parasite found in two host species was also studied. The phylogenetic tree analysis of small-subunit rDNA sequences of S. epinepheli from both infected hosts was constructed using two algorithms, maximum likelihood (ML) and Bayesian inference (BI). They were placed in the clustered basal sphaerosporid clade that contain four long SSU rDNA sphaerosporid species including Sphaerospora truttae, Sphaerospora elegans, Sphaerospora ranae, Sphaerospora fugu and Bipteria formosa with strong bootstrap supports. Histopathologically, renal intratubular myxosporean spores were associated with tubulonephosis, tubular necrosis, chronic interstitial nephritis and mimic membranoproliferative glomerulonephritis. This myxosporean parasite appears to be a significant pathogen on the basis of pathological changes in the renal tubules and is highly distributed in orange-spotted grouper.

  16. Characterization and expression analysis of Calmodulin (CaM) in orange-spotted grouper (Epinephelus coioides) in response to Vibrio alginolyticus challenge.

    Science.gov (United States)

    Luo, Sheng-Wei; Xie, Fu-Xing; Liu, Yuan; Wang, Wei-Na

    2015-10-01

    Vibrio alginolyticus containing the highly toxic extracellular product is one of the most serious threats to grouper survival and its minimum lethal dose is approximately 500 CFU/g fish body weight in grouper. To study the toxic effects of V. alginolyticus on the immune system in teleost, Calmodulin (CaM), an important molecular indicator gene, was cloned from the orange-spotted grouper (Epinephelus coioides). The full-length Ec-CaM consisted of a 5'-UTR of 103 bp, an ORF of 450 bp and a 3'-UTR of 104 bp. The Ec-CaM gene encoded a protein of 149 amino acids with an estimated molecular mass of 16.4 kDa and a predicted isoelectric point of 3.93. The deduced amino acid sequence showed that Ec-CaM contained four highly conserved EF-hand domains known to be critical for the function of CaM. Ec-CaM was widely expressed and the highest expression level was observed in liver. Following V. alginolyticus challenge, a sharp increase level of respiratory burst activity and apoptosis ratio were observed. Further analyses of CaM expression and p53 expression in liver, kidney and spleen by qRT-PCR demonstrated that the up-regulated expression of CaM and p53 were observed in the vibrio challenge group. Western blotting analysis confirmed that the Ec-CaM protein was strongly induced in liver at 12 h post-injection, while a sharp increase of p53 protein expression was observed at 24 h post-injection. These results showed CaM expression serving as a potential molecular indicator may help to assess the toxicological effects of V. alginolyticus on the ROS generation and apoptotic process in grouper.

  17. Guatemalan potato moth Tecia solanivora distinguish odour profiles from qualitatively different potatoes Solanum tuberosum L.

    Science.gov (United States)

    Karlsson, Miriam Frida; Birgersson, Göran; Witzgall, Peter; Lekfeldt, Jonas Duus Stevens; Nimal Punyasiri, P A; Bengtsson, Marie

    2013-01-01

    Guatemalan potato moth, Tecia solanivora, lay eggs in the soil nearby potato Solanum spp. and larvae feed on the tubers. We investigated the oviposition behaviour of T. solanivora females and the survival of larval offspring on healthy vs. stressed, i.e. light exposed and/or damaged potato tubers. In choice tests, females laid significantly more eggs in response to potato odour of healthy tubers and female oviposition preference correlated with higher larval survival. Survival of larvae was negatively correlated with the tuber content of the steroid glycoalkaloids α-solanine and α-chaconine: healthy potatoes contained lower amounts than stressed tubers, ranging from 25 to 500 μg g⁻¹ and from 30 to 600 μg g⁻¹, respectively. Analysis of volatile compounds emitted by potato tubers revealed that stressed tubers could clearly be distinguished from healthy tubers by the composition of their volatile profiles. Compounds that contributed to this difference were e.g. decanal, nonanal, isopropyl myristate, phenylacetaldehyde, benzothiazole, heptadecane, octadecane, myristicin, E,E-α-farnesene and verbenone. Oviposition assays, when female moths were not in contact with the tubers, clearly demonstrated that volatiles guide the females to lay fewer eggs on stressed tubers that are of inferior quality for the larvae. We propose that volatiles, such as sesquiterpenes and aldehydes, mediate oviposition behaviour and are correlated with biosynthetically related, non-volatile compounds, such as steroidal glycoalkaloids, which influence larval survival. We conclude that the oviposition response and larval survival of T. solanivora on healthy vs. stressed tubers supports the preference performance hypothesis for insect herbivores.

  18. BASS 4: a software system for ergonomic design and evaluation of working hours

    Directory of Open Access Journals (Sweden)

    Carsten Schomann

    2004-12-01

    Full Text Available OBJECTIVE: To extend an existing computer programme for the evaluation and design of shift schedules (BASS 3 by integrating workload as well as economic aspects. METHODS: The redesigned prototype BASS 4 includes a new module with a suitable and easily applicable screening method (EBA for the assessment of the intensity of physical, emotional and cognitive workload components and their temporal patterns. Specified criterion functions based on these ratings allow for an adjustment of shift and rest duration according to the intensity of physical and mental workload. Furthermore, with regard to interactive effects both workload and temporal conditions, e.g. time of day, are taken into account. In a second new module, important economic aspects and criteria have been implemented. Different ergonomic solutions for scheduling problems can now also be evaluated with regard to their economic costs. RESULTS: The new version of the computer programme (BASS 4 can now simultaneously take into account numerous ergonomic, legal, agreed and economic criteria for the design and evaluation of working hours. CONCLUSIONS: BASS 4 can now be used as an instrument for the design and the evaluation of working hours with regard to legal, ergonomic and economic aspects at the shop floor as well as in administrative (e.g. health and safety inspection and research problems.OBJETIVOS: Expandir um programa computacional existente para planejamento e avaliação dos horários de turnos (BASS 3 por meio da incorporação da carga de trabalho e características econômicas. MÉTODOS: O protótipo BASS 4 contém um novo módulo com um método de triagem (EBA conveniente e de fácil aplicação para a avaliação da intensidade dos componentes físico, emocional e cognitivo da carga de trabalho e seus padrões temporais. O uso de critérios específicos com base nestas avaliações possibilita ajustar a duração do turno e do descanso de acordo com a intensidade da carga de

  19. Interplay Between Amphioxus Complement with Sea Bass Macrophages: Opsonic Activity of Amphioxus Humoral Fluids

    Institute of Scientific and Technical Information of China (English)

    PAN Junli; LIU Min; ZHANG Shicui

    2011-01-01

    Previous studies have shown the existence of a complement system in the amphioxus Branchiostoma japonicum.However,whether it has an opsonic activity similar to that of vertebrates remains unknown.We demonstrated that the humoral fluid (HF)of amphioxus promoted the phagocytosis of yeast cells with sea bass (Lateolabraxjaponicus) macrophages,whereas the C3-depleted and heated HF significantly lost the phagocytosis-promoting capacity.In addition,the precipitation of factor B (Bf) led to a marked loss of opsonic activity.Moreover,C3 fragments in the HF were found to bind to yeast cell surfaces.The results indicate that the amphioxus complement system is an important element involved in the opsonic activity,which promotes the sea bass macrophage phagocytosis by tagging yeast cells with C3 fragments via the activation of alternative complement pathway.

  20. Biometry traits and geometric morphometrics in sea bass (Dicentrarchus labrax from different farming systems

    Directory of Open Access Journals (Sweden)

    Emilio Tibaldi

    2010-01-01

    Full Text Available The effect of the farming system on biometry traits and dressing out yield were inves- tigated in market-size European sea bass (Dicentrarchus labrax cultured extensively or intensively in sea cages or land-based basins. Fish external appearences and shapes were studies with geometric morphometrics in order to assess the potential of combined methodologies in the assessment of finfish quality. Both standard biometry and geometric morphometrics were able to discriminate between sea bass farmed extensively from those cultured under intensive conditions. Geometric morphometrics has been shown to be a valuable tool for describing changes in shape features and could result a useful technique to be associated to biometry traits in the context of fish quality assessment.

  1. Having a BLAST: Searchable transcriptome resources for the gilthead sea bream and the European sea bass.

    Science.gov (United States)

    Louro, Bruno; Marques, João Pedro; Power, Deborah M; Canário, Adelino V M

    2016-12-01

    The gilthead sea bream (Sparus aurata) and the European sea bass (Dicentrarchus labrax) are the most important aquaculture species in the Mediterranean Sea and since the last decade it has been seen an exponential increase in their available molecular resources. In order to improve accessibility to transcriptome resources, Expressed Sequence Tags (ESTs), mRNA sequences and raw read sequences were assembled and deposited in BLAST queryable databases. The publicly available sea bream and sea bass sequences (6.4 and 247.5 million) generated 45,094 and 68,117 assembled sequences, with, respectively, arithmetic mean size of 998 and 2125bp and N50 of 1302 and 2966bp. The assemblies will be regularly updated and new analytical tools added to the web server at http://sea.ccmar.ualg.pt. Copyright © 2016 Elsevier B.V. All rights reserved.

  2. Largemouth bass (Micropterus salmoides Lacépède: results of farming trials

    Directory of Open Access Journals (Sweden)

    R. Vicenzi

    2010-01-01

    Full Text Available In the last years in the United States, the demand of largemouth bass (Micropterus salmoides larger than the size usually produced for sport fishing purposes has increased. The growth phase is carried on in ponds, after having evaluated different strains (Williamson and Carmichael, 1990 using feeds for salmonids (Tidwell et al., 1996 supplemented with amino acids (Coyle et al., 2000. Also in Italy, the market currently requires largemouth bass of 300-500 g. This situation has induced one farmer to cooperate with our research centre and carried out trials to verify the possibility of rearing this fish, from the fingerling stage up to the size suitable for food, using the same farming techniques as those currently being applied in the United States (Davis and Lock, 1997.

  3. The potato amylase inhibitor gene SbAI regulates cold-induced sweetening in potato tubers by modulating amylase activity.

    Science.gov (United States)

    Zhang, Huiling; Liu, Jun; Hou, Juan; Yao, Ying; Lin, Yuan; Ou, Yongbin; Song, Botao; Xie, Conghua

    2014-09-01

    Potato cold-induced sweetening (CIS) is critical for the postharvest quality of potato tubers. Starch degradation is considered to be one of the key pathways in the CIS process. However, the functions of the genes that encode enzymes related to starch degradation in CIS and the activity regulation of these enzymes have received less attention. A potato amylase inhibitor gene known as SbAI was cloned from the wild potato species Solanum berthaultii. This genetic transformation confirmed that in contrast to the SbAI suppression in CIS-resistant potatoes, overexpressing SbAI in CIS-sensitive potatoes resulted in less amylase activity and a lower rate of starch degradation accompanied by a lower reducing sugar (RS) content in cold-stored tubers. This finding suggested that the SbAI gene may play crucial roles in potato CIS by modulating the amylase activity. Further investigations indicated that pairwise protein-protein interactions occurred between SbAI and α-amylase StAmy23, β-amylases StBAM1 and StBAM9. SbAI could inhibit the activities of both α-amylase and β-amylase in potato tubers primarily by repressing StAmy23 and StBAM1, respectively. These findings provide the first evidence that SbAI is a key regulator of the amylases that confer starch degradation and RS accumulation in cold-stored potato tubers.

  4. The unlucky potato: Study of consumer risk perception toward a GM-potato using mental models

    DEFF Research Database (Denmark)

    Hagemann, Kit; Scholderer, Joachim

    The second generation of GMO aims at providing consumers with food that has a clear health benefit such as rice with enhanced nutrient levels or potatoes with a lower level of natural toxin. The new generation with health enhancing attributes is predicted to reduce consumer skepticism toward use...... of GMO in food production, but a new and ongoing study on consumers' risk perception in regard to a GMO potato reveals that other barriers for acceptance of GMO food exist, barriers such as personal eating history....

  5. Intersex (Testicular Oocytes) in smallmouth bass from the Potomac River and selected nearby drainages

    Science.gov (United States)

    Blazer, V.S.; Iwanowicz, L.R.; Iwanowicz, D.D.; Smith, D.R.; Young, J.A.; Hedrick, J.D.; Foster, S.W.; Reeser, S.J.

    2007-01-01

    Intersex, or the presence of characteristics of both sexes, in fishes that are normally gonochoristic has been used as an indicator of exposure to estrogenic compounds. In 2003, during health assessments conducted in response to kills and a high prevalence of skin lesions observed in smallmouth bass Micropterus dolomieu in the South Branch of the Potomac River, the presence of immature oocytes within testes was noted. To evaluate this condition, a severity index (0-4) was developed based on the distribution of oocytes within the testes. Using gonad samples collected from 2003 to 2005, the number of histologic sections needed to accurately detect the condition in mature smallmouth bass was statistically evaluated. The reliability of detection depended on the severity index and the number of sections examined. Examining five transverse sections taken along the length of the gonad resulted in a greater than 90% probability of detecting testicular oocytes when the severity index exceeded 0.5. Using the severity index we compared smallmouth bass collected at selected sites within the South Branch during three seasons in 2004. Seasonal differences in severity and prevalence were observed. The highest prevalence and severity were consistently noted during the prespawn-spawning season, when compared with the postspawn season. In 2005, smallmouth bass were collected at selected out-of-basin sites in West Virginia where fish kills and external skin lesions have not been reported, as well as at sites in the Shenandoah River, Virginia (part of the Potomac drainage), where kills and lesions occurred in 2004-2005. The prevalence of testicular oocytes is discussed in terms of human population and agricultural intensity. ?? Copyright by the American Fisheries Society 2007.

  6. Application of a bioenergetics model for hatchery production: Largemouth bass fed commercial diets

    Science.gov (United States)

    Csargo, Isak J.; Michael L. Brown,; Chipps, Steven R.

    2012-01-01

    Fish bioenergetics models based on natural prey items have been widely used to address research and management questions. However, few attempts have been made to evaluate and apply bioenergetics models to hatchery-reared fish receiving commercial feeds that contain substantially higher energy densities than natural prey. In this study, we evaluated a bioenergetics model for age-0 largemouth bass Micropterus salmoidesreared on four commercial feeds. Largemouth bass (n ≈ 3,504) were reared for 70 d at 25°C in sixteen 833-L circular tanks connected in parallel to a recirculation system. Model performance was evaluated using error components (mean, slope, and random) derived from decomposition of the mean square error obtained from regression of observed on predicted values. Mean predicted consumption was only 8.9% lower than mean observed consumption and was similar to error rates observed for largemouth bass consuming natural prey. Model evaluation showed that the 97.5% joint confidence region included the intercept of 0 (−0.43 ± 3.65) and slope of 1 (1.08 ± 0.20), which indicates the model accurately predicted consumption. Moreover model error was similar among feeds (P = 0.98), and most error was probably attributable to sampling error (unconsumed feed), underestimated predator energy densities, or consumption-dependent error, which is common in bioenergetics models. This bioenergetics model could provide a valuable tool in hatchery production of largemouth bass. Furthermore, we believe that bioenergetics modeling could be useful in aquaculture production, particularly for species lacking historical hatchery constants or conventional growth models.

  7. Species Profiles: Life Histories and Environmental Requirements of Coastal Fishes and Invertebrates (South Atlantic). Striped Bass

    Science.gov (United States)

    1989-12-01

    the sides (Werner 1980). Osteological vomer and paiatines (Hardy 1978). differences are also evident in the three species (Woolcott 1957; Harrell 1984...Percichthyidae) by means of osteological patterns, meristics and Holland, B.F., Jr., and G.F. Yelverton. 1973. morphometrics. Ph.D. Dissertation. Uni...1957. Comparative osteology Striped Bass Subcommittee of the House of of serranid fishes of the genus Roccus Representatives. 9 pp. (Mitchill). Copeia

  8. Influence of temperature, oxygen and salinity on the metabolism of the European sea bass

    Science.gov (United States)

    Claireaux, G.; Lagardère, J.-P.

    1999-09-01

    Standard (SMR) and routine (RMR) metabolic rates of groups (4 to 5 individuals) of European sea bass ( Dicentrarchus labrax) were measured at combinations of the following factors: temperature (10, 15, 20 and 25°C), oxygenation level (air saturation to 1.5 mg dm -3) and salinity (30, 20, 10 and 5‰). The influence of these environmental conditions on fish metabolic demand was then analysed through ANOVA. At 10, 15, 20 and 25°C, standard metabolic rates were 36, 65, 89, and 91 mg O 2 kg -1 h -1, respectively, while routine oxygen consumptions covered most of the metabolic range accessible. Osmoregulatory costs are linked to metabolic activity through ventilation. This relationship was highlighted by the observed interaction between environmental salinity and temperature. We were, however, unable to detect interactions between salinity and routine metabolic rate, or between salinity and oxygenation level. In order to delineate more precisely the restrictions imposed by water oxygenation on fish metabolic performance we determined the limiting oxygen concentration curves at each experimental temperature. We followed up by modelling the bass active metabolic rate (AMR) and metabolic scope (MS) as functions of both ambient temperature and oxygenation. These mathematical models allowed the characterisation of the controlling and limiting effects of water temperature and oxygen content on the metabolic capacity of the species. Thus, AMR at 10, 15 and 20°C were estimated at 65, 160 and 360 mg O 2 kg -1 h -1, respectively. However, at higher temperature (25°C) AMR dropped slightly (to 340 mg O 2 kg -1 h -1). Bass MS increased by a factor of 9 between 10 and 20°C, but diminished at higher temperatures. The present study contributes to our current understanding of the influences of environmental factors on the metabolism of sea bass and provides a bioenergetic basis for a study of how environmental constraints govern the spatial and temporal distribution pattern of this

  9. Environmental factors affecting thyroid function of wild sea bass (Dicentrarchus labrax) from European coasts

    OpenAIRE

    Schnitzler, Joseph; Klaren, Peter; Bouquegneau, Jean-Marie; Das, Krishna

    2012-01-01

    Thyroid functional status of wild fish in relation with the contamination of their environment deserves further investigation. We here applied a multi-level approach of thyroid function assessment in 87 wild sea bass collected near several estuaries: namely the Scheldt, the Seine, the Loire, the Charente and the Gironde. Thyroxine (T4) and triiodothyronine (T3) concentrations in muscle were analyzed by radioimmunoassay. The activity of hepatic enzymes involved in extrathyroidal pathways of th...

  10. Dissolved oxygen regimen (PO2 may affect osmorespiratory compromise in European sea bass (Dicentrarchus labrax, L.

    Directory of Open Access Journals (Sweden)

    Genciana Terova

    2010-02-01

    Full Text Available Fundamentally, in land based mediterranean aquaculture, two techniques are applied to supply water with oxygen: paddling water aeration and application of pure oxygen. The two oxygenation techniques result in quite different PO2 regimens and, consequently, different fish growth performance and gill morphology. Data exist showing a reduction in total respiratory surface (RSA and increasing gas diffusion distance (GDD in gills of sea bass (Dicentrarchus labrax, L. farmed under elevated PO2 regimens. That such a modification might have an effect on the ion regulation has been defined elsewhere as osmorespiratory compromise. In this study, European sea bass previously acclimatized to two PO2 regimens, mild hypoxia and mild hyperoxia (70-80% and 130-140% of the saturation value, respectively, were challenged for 1 hour with hypo-osmotic plus manipulation stress in two separate trials. During the first trial, when only Na+ loss was determined, the ion efflux during the first 5 min resulted in a rate of 163.72±31 and 112.23±87 nmol g-1min-1 from hypoxia and hyperoxia sea bass groups, respectively, and, if sustained, would approach 15.3 and 11.2% per hour of the total body Na+, respectively. During the second trial, in which both Na+ and Cl- loss were determined, after 60 min the Na+ loss was shown to be 76.86±12 and 179.28±32 nmol g-1 min-1 for the fish previously acclimatized to hyperoxia and hypoxia regimens, respectively, whereas for Cl- this loss was 62.02±11 and 157.28±28 nmol g-1min-1, respectively. Our data are compatible with the hypothesis of an osmotic advantage of sea bass exposed to an elevated PO2 regimen, achievable with application of pure oxygen, instead of simple water aeration.

  11. Genetic variation and balancing selection at MHC class II exon 2 in cultured stocks and wild populations of orange-spotted grouper (Epinephelus coioides).

    Science.gov (United States)

    Meng, Z N; Yang, S; Fan, B; Wang, L; Lin, H R

    2012-11-12

    Major histocompatibility complex (MHC) molecules play vital roles in triggering adaptive immune responses and are considered the most variable molecules in vertebrates. Recently, many studies have focused on the polymorphism and evolution mode of MHC in both model and non-model organisms. Here, we analyzed the MHC class II exon 2-encoding β chain in comparison with the mitochondrial Cytb gene and our previously published microsatellite data set in three cultured stocks and four wild populations of the orange-spotted grouper (Epinephelus coioides) in order to investigate its genetic variation and mechanism of evolution. We detected one to four alleles in one individual, suggesting that at least two loci exist in the orange-spotted grouper, as well as a particularly high level of allelic diversity at the MHC loci. Furthermore, the cultured stocks exhibited reduced allelic diversity compared to the wild counterparts. We found evidence of balancing selection at MHC class II exon 2, and codon sites under positive selection were largely correspondent to the protein-binding region. In addition, MHC class II exon 2 revealed significant differences between population differentiation patterns from the neutral mitochondrial Cytb and microsatellites, which may indicate local adaptation at MHC loci in orange-spotted grouper originating from the South China Sea and Southeast Asia.

  12. Identification and characterization of TRP14, a thioredoxin-related protein of 14 kDa from orange-spotted grouper, Epinephelus coioides.

    Science.gov (United States)

    Wei, Jingguang; Ji, Huasong; Guo, Minglan; Yan, Yang; Qin, Qiwei

    2013-11-01

    Thioredoxin (abbreviated as Trx) is an important ubiquitous disulfide reductase, which can protect organisms against various oxidative stresses. In the present study, a thioredoxin-related protein of 14 kDa (named as Ec-TRP14) was identified from the marine fish grouper, Epinephelus coioides by RACE PCR. The full-length cDNA of Ec-TRP14 was comprised of 1066 bp with a 372 bp open reading frame that encodes a putative protein of 123 amino acids. Similar to most TRP14s, Ec-TRP14 contained the conserved motif C-P-D-C. Ec-TRP14 mRNA is predominately expressed in liver, brain and muscle. The expression of Ec-TRP14 was up-regulated in the liver of grouper challenged with SGIV. Ec-TRP14 was recombined and expressed in Escherichia coli BL21 (DE3), and the rEc-Ec-TRP14 fusion protein was demonstrated to possess the antioxidant activity. The grouper spleen (GS) cells were treated with a high concentration of rEc-TRP14 (8.3 μg/ml), which significantly enhanced cells viability under damage caused by viral infection. These results together indicated that Ec-TRP14 could function as an important antioxidant in a physiological context, and might be involved in the responses to viral challenge.

  13. Molecular cloning of the insulin-like growth factor 3 and difference in the expression of igf genes in orange-spotted grouper (Epinephelus coioides).

    Science.gov (United States)

    Yang, Huirong; Chen, Huapu; Zhao, Huihong; Liu, Li; Xie, Zhenzhen; Xiao, Ling; Li, Shuisheng; Zhang, Yong; Lin, Haoran

    2015-08-01

    Insulin-like growth factor (Igf) is the key regulator for development, growth, and reproduction. In most vertebrate species, the Igf family has two forms: Igf1 and Igf2. A novel form of Igf, termed Igf3, was recently discovered in fish. In the present study, we isolated igf3 from the orange-spotted grouper (Epinephelus coioides). The orange-spotted grouper igf3 consisted of a full-length cDNA of 1014 nucleotides with an open reading frame (ORF) of 597 bp, encoding for proteins of 199 amino acid residues in length. Tissue distribution analysis showed that igf1 widely expressed with the highest expression in the pituitary and liver. igf2 was expressed highly in all the tissues except the olfactory bulb, while igf3 showed the highest expression in the ovary, and moderate expression in brain areas. The expression profiles of three igf genes during the ovarian development and growth hormone (Gh) and human chorionic gonadotropin (hCG) treatment were also investigated. Three igf genes exhibited different expression patterns during the ovarian development, and showed different responses to the Gh and hCG treatments, appearing to play distinct roles in ovarian development. The present study provides further evidence for the existence of an intraovarian Igf system in orange-spotted grouper.

  14. Reproductive Biology and Fishery-Related Characteristics of the Malabar Grouper (Epinephelus malabaricus Caught in the Coastal Waters of Mafia Island, Tanzania

    Directory of Open Access Journals (Sweden)

    Lydia Gaspare

    2013-01-01

    Full Text Available The reproductive biology and fishery-related characteristics of the Malabar grouper (Epinephelus malabaricus (Bloch and Schneider, 1801 specimens were investigated. The size of females ranged from 25 to 113 cm total length (LT, with 50% sexually mature at 79 cm LT, and the males (97 cm to 114 cm LT were larger than the females. Due to the sex ratios and size distribution of the sample, it appeared that the groupers change sex between 97 and 113 cm LT. However, the gonadal histology data lacked specimens in the transitional stage. The spawning peak occurred in November, as defined by the presence of ripe females, and the spawning season lasted from September to February. The size of the fish correlated positively with the water depth at capture, which is also related to oxygen levels in deep water being more favourable for larger fish. Larger specimens (>100 cm LT were targeted by fishers between December and February, when the northeast monsoon coincides with calmer weather and the spawning season. Fishers were interviewed, and observations were made on fishing gear, vessels, and grounds. There was no indication that small-scale fishers targeted spawning aggregations; therefore, fisheries independent research is recommended in order to verify the time, location, and behaviour of the spawning of Malabar groupers for management and conservation purposes.

  15. Non-lethal approach identifies variability of δ15N values in the fin rays of Atlantic Goliath Grouper, Epinephelus itajara

    Directory of Open Access Journals (Sweden)

    Orian E. Tzadik

    2015-06-01

    Full Text Available The Atlantic Goliath Grouper, Epinephelus itajara, is critically endangered throughout its range but has begun to show initial signs of recovery in Florida state waters. As the population continues to rebound, researchers face a pressing need to fill the knowledge gaps about this iconic species. Here, we examined the δ15N isotopic records in fin rays collected from Atlantic Goliath Grouper, and related changes of isotopic ratios over time to life history characteristics. Fin-ray analysis was used as a non-lethal technique to sample individuals from two locations at similar latitudes from the west and east coasts of Florida, USA. δ15N data were acquired by mechanically separating the annuli of each fin ray and then analyzing the material in an Irradiance Elemental Analyzer Mass Spectrometer. The δ15N values were consistent among individuals within populations from each coast of Florida, and mirrored the expected changes over the lives of the fish. Overall, differences were found between δ15N values at juvenile life history phases versus adult phases, but the patterns associated with these differences were unique to each coastal group. We demonstrated, for the first time, that δ15N values from fin rays can be used to assess the life histories of Atlantic Goliath Grouper. The non-lethal strategies outlined here can be used to acquire information essential to the management of species of concern, such as those that are threatened or endangered.

  16. Non-lethal approach identifies variability of δ15N values in the fin rays of Atlantic Goliath Grouper, Epinephelus itajara

    Science.gov (United States)

    Goddard, Ethan A.; Hollander, David J.; Koenig, Christopher C.; Stallings, Christopher D.

    2015-01-01

    The Atlantic Goliath Grouper, Epinephelus itajara, is critically endangered throughout its range but has begun to show initial signs of recovery in Florida state waters. As the population continues to rebound, researchers face a pressing need to fill the knowledge gaps about this iconic species. Here, we examined the δ15N isotopic records in fin rays collected from Atlantic Goliath Grouper, and related changes of isotopic ratios over time to life history characteristics. Fin-ray analysis was used as a non-lethal technique to sample individuals from two locations at similar latitudes from the west and east coasts of Florida, USA. δ15N data were acquired by mechanically separating the annuli of each fin ray and then analyzing the material in an Irradiance Elemental Analyzer Mass Spectrometer. The δ15N values were consistent among individuals within populations from each coast of Florida, and mirrored the expected changes over the lives of the fish. Overall, differences were found between δ15N values at juvenile life history phases versus adult phases, but the patterns associated with these differences were unique to each coastal group. We demonstrated, for the first time, that δ15N values from fin rays can be used to assess the life histories of Atlantic Goliath Grouper. The non-lethal strategies outlined here can be used to acquire information essential to the management of species of concern, such as those that are threatened or endangered. PMID:26082864

  17. Residues of benzocaine in rainbow trout, largemouth bass, and fish meal

    Science.gov (United States)

    Allen, J.L.

    1988-01-01

    Residues of the anesthetic benzocaine in muscle tissue of rainbow trout (Salmo gairdneri ) and largemouth bass (Micropterus salmoides ) were determined after exposure of the fish to 50 mg benzocaine/L for 15 min and withdrawal times of 0-24 h. The mean concentration of benzocaine residues in fish sampled immediately after exposure was 14.0 mu g/g in rainbow trout and 10.6 mu g/g in largemouth bass. Residues were below the control value after 8 h of withdrawal in largemouth bass and near the control value after 4 h of withdrawal in rainbow trout. Although residues of benzocaine were high in fish immediately after exposure, the concentration declined rapidly when the fish were held in flowing fresh water. Fish meal prepared from Pacific salmon (Oncorhynchus sp.) that had been anesthetized with benzocaine or tricaine (MS-222) contained residues of 45.1 mu g benzocaine/g or 47.7 mu g tricaine/g.

  18. Poly-chlorinated biphenyls (PCB in European sea bass from different rearing systems

    Directory of Open Access Journals (Sweden)

    D. Majolini

    2010-04-01

    Full Text Available The chemical composition and the level of seven indicator congeners of PCB (BZ/IUPAC no. 28, 52, 101, 118, 138, 153, and 180 were determined in 133 specimens of farm-raised European sea bass (Dicentrarchus labrax. The fish were caught from different aquaculture rearing systems: extensive fish valley, semi-intensive ponds, sea-cages, and intensive concrete tanks. Fresh fillet chemical composition differed among the rearing systems (fat: 2.9, 7.5, 7.1, and 9.4%; P<0.001. Total concentrations of indicator congeners were below the EU limit (200ng/g fat for meat, poultry and eggs, being the lowest in extensively-reared sea bass (75ng/g fat, intermediate in sea bass from semi-intensive ponds (119 and sea cages (116, and the highest in intensively-reared fish (133 (P<0.001. Similarly, PCB concentrations in fresh fillets were 2,438, 10,116, 8,491, and 12,952pg/g in the four systems (P<0.001. The congener 153 was the most represented in all rearing systems. TEQ concentrations for the dioxin-like congener no. 118 were 50 to 200 times lower than the maximum admitted value. Total concentration of indicator congeners of PCB was poorly correlated with fish slaughter weight (R2=0.17, while highly correlated with fat concentration of fish (R2=0.75.

  19. A simple model for predicting survival of angler-caught and released largemouth bass

    Science.gov (United States)

    Wilde, G.R.; Pope, K.L.

    2008-01-01

    We conducted a controlled experiment in the laboratory to assess the influence of anatomical hooking location and water temperature on survival of angler-caught and released largemouth bass Micropterus salmoides. Survival was 98% (58 of 59 fish) among fish that were hand-hooked within the oral cavity (including the gills), whereas survival was 66% (33 of 50 fish) among fish that were hand-hooked in the esophagus. Survival of hooked fish was not significantly influenced by water temperature (7-27??C) or the hooking location X water temperature interaction. We combined our results with prior research to develop a predictive model of largemouth bass survival, which was 98.3% (SD = 1.87%) for fish hooked in the oral cavity and 55.0% (SD = 9.70%) for fish hooked in the esophagus. The model is valid for water temperatures ranging from 7??C to 27??C and allows one to estimate, with known precision, the survival of angler-caught and released largemouth bass without the need for controlled studies or for holding fish in pens or cages to assess delayed mortality. ?? Copyright by the American Fisheries Society 2008.

  20. Summer habitat selection by striped bass, Morone Saxatilis, in Cherokee Reservoir, Tennessee, 1977

    Energy Technology Data Exchange (ETDEWEB)

    Waddle, H.R.; Coutant, C.C.; Wilson, J.L.

    1980-02-01

    Summer habitat selection patterns of 18 adult striped bass (Morone saxatilis) in Cherokee Reservoir were monitored with externally attached temperature-sensing acoustic or radio transmitters from June through September 1977. Mortalities of adult striped bass in this reservoir were hypothesized to be related to high summer temperatures and low dissolved oxygen (DO). The inhabited areas or refuges differed from noninhabited areas by maintaining temperatures less than or equal to 22 C and DO concentrations greater than 5 mg/liter. Total water hardness, pH, and water transparency were not significantly different among refuges and noninhabited areas. Movement of fish outside refuges occurred more frequently and for longer periods during June when the summer pattern of high temperatures and low DO was less severe. Fish experienced temperatures between 15 and 27 C with mean temperatures of individuals ranging from 18.5 to 22.0 C. Several tagged fish migrated outside the refuges and selected the lowest available temperature, generally near 21 C, even though DO concentrations at these temperatures were 3 mg/liter or less. Long-term survival of tagged and nontagged fish outside refuges was undetermined because no fish were tracked outside a refuge for more than 12 days without being lost. This study indicates that temperature strongly influences the behavior of striped bass and that adults of this species may have a thermal preferendum of approximately 21 C.